BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004487
         (749 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score = 1164 bits (3010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/749 (72%), Positives = 652/749 (87%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++NTVSTNM+ISGYVKSGNL  AR+LF+ MV+RTAV+WTILIGGYSQ NQF+EAF+LF
Sbjct: 78  MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 137

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M+   G++PDYVTF TLLSGC+  +  N++ QV   IIK GY+S LI+ N+LVDSYCK
Sbjct: 138 VQMQR-CGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK 196

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LDLA ++FKEMP+ DSVS+NA+ITG++K+GL+E+A+ LFVEMQ+ G KP++FTFAA 
Sbjct: 197 SNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAV 256

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A +GL DI LG+Q+H+FV+KTNFV NVFV+NALLD YSKHD V++ARKLF EMPE DG
Sbjct: 257 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 316

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VSYNV+I+ YAW+ ++K +  LFRELQFT FDR QFPF+T+LS+ +N LD ++GRQIH Q
Sbjct: 317 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 376

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TIVTTA SE+ V NSLVDMYAKCG+FEEA+ IF NL+H S VPWTAMISAYVQKG  EE 
Sbjct: 377 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 436

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF +M +A++ ADQATFAS+LRASA +ASLSLGKQLHSF+I+SGFMSNVFSGSALLD+
Sbjct: 437 LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDV 496

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK GS+KDA+QTF+EMP+RNIVSWNA+ISA AQNG+A+ATLKSF++MV SG QPDSVS 
Sbjct: 497 YAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSF 556

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L VLSACSH GL+EEGL +FNSMTQ YKL P++EHYAS+VD+LCRSG F+EAEKLMA+MP
Sbjct: 557 LGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP 616

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +PDEIMWSSV+N+CRIHKN E A++AADQLF ME+LRDAAPYV MSNIYA AGQWE+VS
Sbjct: 617 IDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVS 676

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V KAMR+RGV+K+ AYSWVE+K + H+F+AND  HPQ  EIR+KI+ L + M++ GYKP
Sbjct: 677 KVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKP 736

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTSCALH+EDE+ KVESLKYHSERLAIAFALI+TPEGSPILVMKNLRAC DCHAAIK+IS
Sbjct: 737 DTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVIS 796

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GREITVRDS+RFHHF+DGFCSC DFW
Sbjct: 797 KIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 245/496 (49%), Gaps = 33/496 (6%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           N +  + A I+K G++      N  V ++ K   L  AR++F++MP K++VS N +I+G+
Sbjct: 34  NVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGY 93

Query: 150 AKEG-----------------------------LNE--EAIKLFVEMQHLGFKPSDFTFA 178
            K G                             LN+  EA +LFV+MQ  G +P   TF 
Sbjct: 94  VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 153

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             LS   G        QV   ++K  +   + V N L+D Y K + +  A +LF EMPE+
Sbjct: 154 TLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI 213

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VSYN MIT Y+ +   ++++ LF E+Q +    ++F F+ +L       D+ +G+QIH
Sbjct: 214 DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIH 273

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  I T  +  V V+N+L+D Y+K     +A+++F  +     V +  +IS Y   G  +
Sbjct: 274 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 333

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
            A +LF E+        Q  FA++L  ++      +G+Q+H+  I +   S +  G++L+
Sbjct: 334 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLV 393

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMYAK G  ++A   F  +  R+ V W A+ISA  Q G  +  L+ F  M Q+    D  
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 453

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           +  S+L A +    +  G Q  +S   K          ++++D+  + G   +A +   +
Sbjct: 454 TFASLLRASASIASLSLGKQ-LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512

Query: 539 MPFEPDEIMWSSVINS 554
           MP + + + W+++I++
Sbjct: 513 MP-DRNIVSWNAMISA 527



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 250/573 (43%), Gaps = 100/573 (17%)

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           R+ K     D+   N  +  F K G   +A +LF +M H                     
Sbjct: 42  RIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPH--------------------- 80

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                             +N    N ++  Y K   + EARKLF  M E   V++ ++I 
Sbjct: 81  ------------------KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 122

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV-ANKLDLQIGRQIHTQTIVTTAI 307
            Y+   Q+KE+ +LF ++Q    +     F TLLS    +++  QI  Q+ TQ I     
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQI-TQVQTQIIKLGYD 181

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S + V N+LVD Y K  R + A ++F  +  I +V + AMI+ Y + G  E+A+NLF+EM
Sbjct: 182 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM 241

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
             + +   + TFA++L A+  L  + LG+Q+HSFVI++ F+ NVF  +ALLD Y+K  S+
Sbjct: 242 QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 301

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA + F EMPE++ VS+N +IS  A +G  +     F ++  + +        ++LS  
Sbjct: 302 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIA 361

Query: 488 SH-----------------------------------CGLIEEGLQYFNSMTQKYKLRPK 512
           S+                                   CG  EE    F ++T +  +   
Sbjct: 362 SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP-- 419

Query: 513 KEHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
              + +M+    + G ++E  +L   M Q     D+  ++S++ +     +L   K+   
Sbjct: 420 ---WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHS 476

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            + K   + +     A+ ++YA  G  +   Q  + M +R +      SW  + S     
Sbjct: 477 FIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI-----VSWNAMISA---- 527

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
                 + Q  E    +++  +EM   G +PD+
Sbjct: 528 ------YAQNGEAEATLKSF-KEMVLSGLQPDS 553



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 154/352 (43%), Gaps = 35/352 (9%)

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S+ + KL L +   I  + + T    +   +N  V  + K G   +A+++F  + H +TV
Sbjct: 25  SLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTV 84

Query: 343 PWTAMISAYVQKGNL-------------------------------EEALNLFIEMCRAN 371
               MIS YV+ GNL                               +EA  LF++M R  
Sbjct: 85  STNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCG 144

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  TF ++L         +   Q+ + +I+ G+ S +  G+ L+D Y KS  L  A 
Sbjct: 145 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q FKEMPE + VS+NA+I+  +++G  +  +  F +M  SG +P   +  +VL  C++ G
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIG 262

Query: 492 LIEEGL-QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           L +  L Q  +S   K           +++D   +     +A KL  +MP E D + ++ 
Sbjct: 263 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNV 321

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           +I+        ++A     +L      R   P+  M +I +    WE   Q+
Sbjct: 322 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 373


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score = 1138 bits (2944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/749 (70%), Positives = 635/749 (84%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N +STN +I GY+KSGNL+TAR LF+SMV R+ V+WT+LIGGY+Q N+F EAF LF
Sbjct: 68  MPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLF 127

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DM    G  PD++T ATLLSG +E ++ NE+ QVH  ++K GY+S L++CNSL+DSYCK
Sbjct: 128 ADM-CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCK 186

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R L LA  +FK M +KD+V+FNAL+TG++KEG N +AI LF +MQ LGF+PS+FTFAA 
Sbjct: 187 TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAV 246

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+AG+ + DI  G+QVH+FVVK NFV NVFVANALLD YSKHD +VEARKLF EMPEVDG
Sbjct: 247 LTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDG 306

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +SYNV+ITC AWN + +ESL+LFRELQFTRFDR QFPF+TLLS+ AN L+L++GRQIH+Q
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ 366

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            IVT AISEV V NSLVDMYAKC +F EA  IFA+L+H S+VPWTA+IS YVQKG  E+ 
Sbjct: 367 AIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG 426

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF+EM RA I AD AT+ASILRA A LASL+LGKQLHS +IRSG +SNVFSGSAL+DM
Sbjct: 427 LKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDM 486

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK GS+K+A+Q F+EMP RN VSWNALISA AQNGD    L+SFE M+ SG QP+SVS 
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSF 546

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LS+L ACSHCGL+EEGLQYFNSMTQ YKL P++EHYASMVD+LCRSG FDEAEKLMA+MP
Sbjct: 547 LSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMP 606

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPDEIMWSS++NSCRIHKN E A KAADQLF M+ LRDAAPYV+MSNIYA AG+W+SV 
Sbjct: 607 FEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVG 666

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKA+RERG+RKV AYSWVE+K K HVF+AND  HPQT EI RK++ L ++M+++GYKP
Sbjct: 667 KVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKP 726

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D++CALH+ DEE+KVESLKYHSER+AIAFALI+TP+GSPILVMKNLRAC DCHAAIK+IS
Sbjct: 727 DSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVIS 786

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI  REITVRDSSRFHHF DG CSC+D+W
Sbjct: 787 KIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 239/492 (48%), Gaps = 33/492 (6%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            V A +IK G++      N  V ++ +   L  AR++F EMP K+ +S N +I G+ K G
Sbjct: 28  HVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSG 87

Query: 154 -LNE------------------------------EAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+                               EA  LF +M   G  P   T A  LS
Sbjct: 88  NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLS 147

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                  +    QVH  VVK  +   + V N+LLD Y K   +  A  LF  M E D V+
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N ++T Y+      +++ LF ++Q   F  S+F F+ +L+      D++ G+Q+H+  +
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +  V VAN+L+D Y+K  R  EA+++F  +  +  + +  +I+     G +EE+L 
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF E+        Q  FA++L  +A   +L +G+Q+HS  I +  +S V  G++L+DMYA
Sbjct: 328 LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA 387

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K     +A + F ++  ++ V W ALIS   Q G  +  LK F +M ++    DS +  S
Sbjct: 388 KCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYAS 447

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L AC++   +  G Q  + + +   L       A +VD+  + G   EA ++  +MP  
Sbjct: 448 ILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA-LVDMYAKCGSIKEALQMFQEMPVR 506

Query: 543 PDEIMWSSVINS 554
            + + W+++I++
Sbjct: 507 -NSVSWNALISA 517



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 37/393 (9%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT----- 248
           + V A ++KT F  N    N  +  + +   +  ARKLF EMP  + +S N MI      
Sbjct: 27  QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86

Query: 249 --------------------------CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
                                      YA + ++ E+  LF ++            +TLL
Sbjct: 87  GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S       +    Q+H   +     S + V NSL+D Y K      A  +F +++    V
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            + A+++ Y ++G   +A+NLF +M        + TFA++L A  ++  +  G+Q+HSFV
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++  F+ NVF  +ALLD Y+K   + +A + F EMPE + +S+N LI+ CA NG  + +L
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESL 326

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--SMV 520
           + F ++  + +        ++LS  ++   +E G Q     +Q        E     S+V
Sbjct: 327 ELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIH---SQAIVTDAISEVLVGNSLV 383

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           D+  +   F EA ++ A +  +   + W+++I+
Sbjct: 384 DMYAKCDKFGEANRIFADLAHQ-SSVPWTALIS 415


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score = 1134 bits (2933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/749 (71%), Positives = 636/749 (84%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N  STN +I GY+KSGNL+ AR LF+SM  RTAV+WT+LIGGY+Q NQFREAF LF
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           ++M   G  DPD+V+ ATLLSG +E D+ NE+ QVH+ +IK GY+S L++ NSL+DSYCK
Sbjct: 187 IEMGRHG-IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK 245

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R L LA ++F ++P++DSV+FNAL+TG++KEG N EAI LF +MQ +G++P++FTFAA 
Sbjct: 246 TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAI 305

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+AG+ L DI  G+QVH FVVK NFV NVFVANALLD YSKHD VVEA KLF EMPEVDG
Sbjct: 306 LTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +SYNV++TCYAWN + KESL+LF+ELQFT FDR  FPF+TLLS+ A  L+L IGRQIH+Q
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TIVT AISE+ V NSLVDMYAKCG F EA  IF++L+  S+VPWTAMIS+YVQKG  E+ 
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF+EM RA I AD AT+ASI+RA A LASL+LGKQLHS +I SG++SNVFSGSAL+DM
Sbjct: 486 LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDM 545

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK GS+KDA+Q F+EMP RN VSWNALISA AQNGD   TL+ FE+MV+SG QPDSVSL
Sbjct: 546 YAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSL 605

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LS+L ACSHCGL+EEGLQYF+SMT+ YKL PKKEHYAS +D+LCR G FDEAEKLMAQMP
Sbjct: 606 LSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMP 665

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPDEIMWSSV+NSC IHKN E AKKAA+QLF M+ LRDAAPYV MSNIYA AG+W++V 
Sbjct: 666 FEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVG 725

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKAMRERGV+KV AYSWVE+K K HVFTAND+ HPQ  EI +K++ L ++M K+GYKP
Sbjct: 726 KVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKP 785

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D+SCALH+ DEE+KVESLKYHSER+AIAFALI+TPEGSPILVMKNLRACTDCHAAIK+IS
Sbjct: 786 DSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVIS 845

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI  REITVRDSSRFHHF+DGFC+CRD+W
Sbjct: 846 KIVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 248/493 (50%), Gaps = 33/493 (6%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           + V A IIK G+N      N LV S+ +   L+ AR++F EMP K+  S N +I G+ K 
Sbjct: 86  LHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKS 145

Query: 153 G-LNE------------------------------EAIKLFVEMQHLGFKPSDFTFAAAL 181
           G L+E                              EA  LF+EM   G  P   + A  L
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL 205

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S       +   RQVH+ V+K  +   + V+N+LLD Y K   +  A +LF ++PE D V
Sbjct: 206 SGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSV 265

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++N ++T Y+     +E++ LF ++Q   +  ++F F+ +L+      D++ G+Q+H   
Sbjct: 266 TFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFV 325

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +    +  V VAN+L+D Y+K  R  EA ++F  +  +  + +  +++ Y   G ++E+L
Sbjct: 326 VKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESL 385

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF E+           FA++L  +A   +L +G+Q+HS  I +  +S +  G++L+DMY
Sbjct: 386 ELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMY 445

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G   +A + F ++  ++ V W A+IS+  Q G  +  LK F +M ++    D+ +  
Sbjct: 446 AKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYA 505

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           S++ AC+    +  G Q  + +     +       A +VD+  + G   +A ++  +MP 
Sbjct: 506 SIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA-LVDMYAKCGSIKDALQMFQEMPV 564

Query: 542 EPDEIMWSSVINS 554
             + + W+++I++
Sbjct: 565 R-NSVSWNALISA 576



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 36/207 (17%)

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI------------------- 442
           +I++GF  N +  + L+  + + G L  A + F EMP +NI                   
Sbjct: 92  IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151

Query: 443 ------------VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
                       V+W  LI   AQN   +     F +M + G  PD VSL ++LS  +  
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEF 211

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             + E ++  +S   K           S++D  C++     A +L   +P E D + +++
Sbjct: 212 DSVNE-VRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP-ERDSVTFNA 269

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKL 577
           ++     +    F ++A +  FKM+++
Sbjct: 270 LLTG---YSKEGFNREAINLFFKMQEV 293


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/749 (69%), Positives = 618/749 (82%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT+S NM+ISG++K G L+ ARELF+ MV+RTAVSWTILIGGY Q NQ +EAF+L+
Sbjct: 69  MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLY 128

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DMR  GG +PDYVT  TLLSG  E +T N ++Q+H  +IK GY   L++CNSLVD+YCK
Sbjct: 129 ADMRR-GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK 187

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL LA ++FK M  KD+V+FN+L+TG++ EGLNEEAI+LF+E+ + G KPSDFTFAA 
Sbjct: 188 THCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAAL 247

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA VGL D   G+QVH FV+KTNFV NVFV NALLD YSKHD V E  KLF EMPE+DG
Sbjct: 248 LSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDG 307

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +SYNV+IT YAWN Q+KES  LFR+LQFTRFDR QFPF+TLLS+  + L+L++GRQIH Q
Sbjct: 308 ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQ 367

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I   A  E +V N+LVDMYAKC   +EA++IF N++  STVPWTAMISAYVQKG  EE 
Sbjct: 368 AITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEG 427

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +N+F +M R  + ADQATFASILRA A LAS+SLG+QLHS +IRSGFMSNV+SGSALLD 
Sbjct: 428 INVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDT 487

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G + DAI++F EMPERN VSWNALISA AQNG+   TL SF+ M+QSGY+PDSVS 
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSF 547

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LSVLSACSHCG +EE L +FNSMTQ Y++ PK+EHY SMVD+LCR+G FDEAEKLM +MP
Sbjct: 548 LSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP 607

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEP EIMWSSV+NSCRIHKN E AKKAAD+LF ME LRDAAPY+ MSNIYAVAGQW++V+
Sbjct: 608 FEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVA 667

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKAMR+RGVRKV AYSWVE+K + HVF+AND+ HP+  +I RKI  L +EM+K+GYKP
Sbjct: 668 KVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKP 727

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DT+CALHD DE IK+ESLKYHSER AIAFAL+NTP+GSPI+VMKNLRACTDCHAAIK+IS
Sbjct: 728 DTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVIS 787

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +I  REI VRDSSRFHHFKDG CSC D+W
Sbjct: 788 QIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 258/531 (48%), Gaps = 39/531 (7%)

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
           +N LI  H  I+K G+N      N  V+++ +   L  A +VF +MP K+++S N +I+G
Sbjct: 26  SNHLIDAH--IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83

Query: 149 FAKEG-------------------------------LNEEAIKLFVEMQHLGFKPSDFTF 177
             K G                                ++EA +L+ +M+  G +P   T 
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
              LS    L    +  Q+H  V+K  +  N+ V N+L+D Y K  C+  A +LF  M  
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V++N ++T Y+     +E+++LF EL  +    S F F+ LLS      D + G+Q+
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   + T  +  V V N+L+D Y+K  + +E  ++F  +  +  + +  +I++Y   G  
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQF 323

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--FMSNVFSGS 415
           +E+ +LF ++        Q  FA++L  +    +L +G+Q+H   I  G  F S V   +
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV--EN 381

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+DMYAK    K+A + F  +  ++ V W A+ISA  Q G  +  +  F DM ++G   
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPA 441

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D  +  S+L AC++   I  G Q  +S+  +          ++++D   + GC  +A K 
Sbjct: 442 DQATFASILRACANLASISLGRQ-LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
             +MP E + + W+++I++   + N++    +  Q+ +     D+  ++++
Sbjct: 501 FGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 226/531 (42%), Gaps = 80/531 (15%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI-------- 247
           + A +VKT F  N   +N  ++ + +   +V A ++F +MP  + +S N+MI        
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 248 --------------TCYAW---------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
                         T  +W         + Q KE+ +L+ +++    +       TLLS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                   +  QIHT  I       + V NSLVD Y K      A ++F ++ +  TV +
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            ++++ Y  +G  EEA+ LF+E+  + I     TFA++L A+  L     G+Q+H FV++
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           + F+ NVF G+ALLD Y+K   + +  + F EMPE + +S+N +I++ A NG  + +   
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDL 329

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY----FNSMTQKY-K 508
           F  +  + +        ++LS  +           HC  I  G  +     N++   Y K
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389

Query: 509 LRPKKEHYASMVDILCRS--------------GCFDEAEKLMAQM---PFEPDEIMWSSV 551
               KE      +I C+S              G  +E   + + M       D+  ++S+
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C    ++   ++    L +   + +     A+ + YA  G      +    M ER  
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER-- 507

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
               + SW  L S           + Q   +   + N  Q+M + GYKPD+
Sbjct: 508 ---NSVSWNALISA----------YAQNGNVDGTL-NSFQQMIQSGYKPDS 544



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 56/214 (26%)

Query: 382 ILRAS-AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           +LR S A   SL+    + + ++++GF  N    +  ++ + + G L  A Q F +MP +
Sbjct: 13  VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72

Query: 441 NI-------------------------------VSWNALISACAQNGDAQATLKSFEDMV 469
           N                                VSW  LI    Q+  ++   + + DM 
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132

Query: 470 QSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           + G +PD V+L+++LS              H  +I+ G +Y N M              S
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY-NLMVCN-----------S 180

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +VD  C++ C   A +L   M    D + ++S++
Sbjct: 181 LVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLM 213


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score = 1104 bits (2855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/749 (69%), Positives = 618/749 (82%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT+S NM+ISG++K G L+ ARELF+ MV+RTAVSWTILIGGY Q NQ +EAF+L+
Sbjct: 69  MPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLY 128

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DMR  GG +PDYVT  TLLSG  E +T N ++Q+H  +IK GY   L++CNSLVD+YCK
Sbjct: 129 ADMRR-GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK 187

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL LA ++FK M  KD+V+FN+L+TG++ EGLNEEAI+LF+E+ + G KPSDFTFAA 
Sbjct: 188 THCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAAL 247

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA VGL D   G+QVH FV+KTNFV NVFV NALLD YSKHD V E  KLF EMPE+DG
Sbjct: 248 LSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDG 307

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +SYNV+IT YAWN Q+KES  LFR+LQFTRFDR QFPF+TLLS+  + L+L++GRQIH Q
Sbjct: 308 ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQ 367

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I   A  E +V N+LVDMYAKC   +EA++IF N++  STVPWTAMISAYVQKG  EE 
Sbjct: 368 AITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEG 427

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +N+F +M R  + ADQATFASILRA A LAS+SLG+QLHS +IRSGFMSNV+SGSALLD 
Sbjct: 428 INVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDT 487

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G + DAI++F EMPERN VSWNALISA AQNG+   TL SF+ M+QSGY+PDSVS 
Sbjct: 488 YAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSF 547

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LSVLSACSHCG +EE L +FNSMTQ Y++ PK+EHY SMVD+LCR+G FDEAEKLM +MP
Sbjct: 548 LSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP 607

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEP EIMWSSV+NSCRIHKN E AKKAAD+LF ME LRDAAPY+ MSNIYAVAGQW++V+
Sbjct: 608 FEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVA 667

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKAMR+RGVRKV AYSWVE+K + HVF+AND+ HP+  +I RKI  L +EM+K+GYKP
Sbjct: 668 KVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKP 727

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DT+CALHD DE IK+ESLKYHSER AIAFAL+NTP+GSPI+VMKNLRACTDCHAAIK+IS
Sbjct: 728 DTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVIS 787

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +I  REI VRDSSRFHHFKDG CSC D+W
Sbjct: 788 QIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 258/531 (48%), Gaps = 39/531 (7%)

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
           +N LI  H  I+K G+N      N  V+++ +   L  A +VF +MP K+++S N +I+G
Sbjct: 26  SNHLIDAH--IVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISG 83

Query: 149 FAKEG-------------------------------LNEEAIKLFVEMQHLGFKPSDFTF 177
             K G                                ++EA +L+ +M+  G +P   T 
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
              LS    L    +  Q+H  V+K  +  N+ V N+L+D Y K  C+  A +LF  M  
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V++N ++T Y+     +E+++LF EL  +    S F F+ LLS      D + G+Q+
Sbjct: 204 KDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   + T  +  V V N+L+D Y+K  + +E  ++F  +  +  + +  +I++Y   G  
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQF 323

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--FMSNVFSGS 415
           +E+ +LF ++        Q  FA++L  +    +L +G+Q+H   I  G  F S V   +
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV--EN 381

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+DMYAK    K+A + F  +  ++ V W A+ISA  Q G  +  +  F DM ++G   
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPA 441

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D  +  S+L AC++   I  G Q  +S+  +          ++++D   + GC  +A K 
Sbjct: 442 DQATFASILRACANLASISLGRQ-LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
             +MP E + + W+++I++   + N++    +  Q+ +     D+  ++++
Sbjct: 501 FGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 226/531 (42%), Gaps = 80/531 (15%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI-------- 247
           + A +VKT F  N   +N  ++ + +   +V A ++F +MP  + +S N+MI        
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 248 --------------TCYAW---------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
                         T  +W         + Q KE+ +L+ +++    +       TLLS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                   +  QIHT  I       + V NSLVD Y K      A ++F ++ +  TV +
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            ++++ Y  +G  EEA+ LF+E+  + I     TFA++L A+  L     G+Q+H FV++
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           + F+ NVF G+ALLD Y+K   + +  + F EMPE + +S+N +I++ A NG  + +   
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDL 329

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY----FNSMTQKY-K 508
           F  +  + +        ++LS  +           HC  I  G  +     N++   Y K
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389

Query: 509 LRPKKEHYASMVDILCRS--------------GCFDEAEKLMAQM---PFEPDEIMWSSV 551
               KE      +I C+S              G  +E   + + M       D+  ++S+
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C    ++   ++    L +   + +     A+ + YA  G      +    M ER  
Sbjct: 450 LRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER-- 507

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
               + SW  L S           + Q   +   + N  Q+M + GYKPD+
Sbjct: 508 ---NSVSWNALISA----------YAQNGNVDGTL-NSFQQMIQSGYKPDS 544



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 56/214 (26%)

Query: 382 ILRAS-AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           +LR S A   SL+    + + ++++GF  N    +  ++ + + G L  A Q F +MP +
Sbjct: 13  VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72

Query: 441 NI-------------------------------VSWNALISACAQNGDAQATLKSFEDMV 469
           N                                VSW  LI    Q+  ++   + + DM 
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132

Query: 470 QSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           + G +PD V+L+++LS              H  +I+ G +Y N M              S
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY-NLMVCN-----------S 180

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +VD  C++ C   A +L   M    D + ++S++
Sbjct: 181 LVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLM 213


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score = 1097 bits (2837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/749 (69%), Positives = 620/749 (82%), Gaps = 36/749 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++NTVSTNM+ISGYVKSGNL  AR+LF+ MV+RTAV+WTILIGGYSQ NQF+EAF+LF
Sbjct: 73  MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 132

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M+   G++PDYVTF TLLSGC+  +  N++ QV   IIK GY+S LI+ N+LVDSYCK
Sbjct: 133 VQMQR-CGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK 191

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LDLA ++FKEMP+ DS                                   FTFAA 
Sbjct: 192 SNRLDLACQLFKEMPEIDS-----------------------------------FTFAAV 216

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A +GL DI LG+Q+H+FV+KTNFV NVFV+NALLD YSKHD V++ARKLF EMPE DG
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 276

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VSYNV+I+ YAW+ ++K +  LFRELQFT FDR QFPF+T+LS+ +N LD ++GRQIH Q
Sbjct: 277 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 336

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TIVTTA SE+ V NSLVDMYAKCG+FEEA+ IF NL+H S VPWTAMISAYVQKG  EE 
Sbjct: 337 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEG 396

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF +M +A++ ADQATFAS+LRASA +ASLSLGKQLHSF+I+SGFMSNVFSGSALLD+
Sbjct: 397 LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDV 456

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK GS+KDA+QTF+EMP+RNIVSWNA+ISA AQNG+A+ATLKSF++MV SG QPDSVS 
Sbjct: 457 YAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSF 516

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L VLSACSH GL+EEGL +FNSMTQ YKL P++EHYAS+VD+LCRSG F+EAEKLMA+MP
Sbjct: 517 LGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP 576

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +PDEIMWSSV+N+CRIHKN E A++AADQLF ME+LRDAAPYV MSNIYA AGQWE+VS
Sbjct: 577 IDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVS 636

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V KAMR+RGV+K+ AYSWVE+K + H+F+AND  HPQ  EIR+KI+ L + M++ GYKP
Sbjct: 637 KVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKP 696

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTSCALH+EDE+ KVESLKYHSERLAIAFALI+TPEGSPILVMKNLRAC DCHAAIK+IS
Sbjct: 697 DTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVIS 756

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GREITVRDS+RFHHF+DGFCSC DFW
Sbjct: 757 KIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            ++L S+ + KL L +   I  + + T    +   +N  V  + K G   +A+++F  + 
Sbjct: 15  LTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMP 74

Query: 338 HISTVPWTAMISAYVQKGNL-------------------------------EEALNLFIE 366
           H +TV    MIS YV+ GNL                               +EA  LF++
Sbjct: 75  HKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQ 134

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R     D  TF ++L         +   Q+ + +I+ G+ S +  G+ L+D Y KS  
Sbjct: 135 MQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 194

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNG 456
           L  A Q FKEMPE +  ++ A++  CA  G
Sbjct: 195 LDLACQLFKEMPEIDSFTFAAVL--CANIG 222



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 37/217 (17%)

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R N   +  +  S+    +    L++   + + ++++GF  +    +  +  + K+G L 
Sbjct: 5   RPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS----------------- 471
            A Q F++MP +N VS N +IS   ++G+     K F+ MV+                  
Sbjct: 65  QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124

Query: 472 --------------GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
                         G +PD V+ +++LS C+     E G Q     TQ  KL        
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH---EMGNQITQVQTQIIKLGYDSRLIV 181

Query: 518 --SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             ++VD  C+S   D A +L  +MP E D   +++V+
Sbjct: 182 GNTLVDSYCKSNRLDLACQLFKEMP-EIDSFTFAAVL 217


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score = 1083 bits (2801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/749 (68%), Positives = 610/749 (81%), Gaps = 2/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN+N+ S +++ISGYVKSGNL  AR +F+   +RT V+WT +IG YS+ N+F +AFKLF
Sbjct: 69  MPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLF 128

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M    GS PDYVT+ TLL+GC++ + A EL Q HA I+K G++    +CN+L+DSY K
Sbjct: 129 AEMHR-SGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFK 187

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD ARR+F EM   DSVSFN +ITG+A  GLNEEAI+LFVEMQ+LGFKPSDFTFAA 
Sbjct: 188 TGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAV 247

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +SA VGL D A G+Q+H FVVKT+F+ NVFV NA LD YSKHDCV E RKLF EMPE+DG
Sbjct: 248 ISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDG 307

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VSYNV+IT YAW  + KES+ LF+ELQFT FDR  FPF T+LS+ A+ LDLQ+GRQ+H Q
Sbjct: 308 VSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQ 367

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +V+ A  + +V+NSLVDMYAKCG+FEEA  IF  LS  STVPWTAMISA VQ+G  E  
Sbjct: 368 VVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENG 427

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF EM RAN+SADQATFA +L+ASA LAS+ LGKQLHS VIRSGFM NV+SG ALLDM
Sbjct: 428 LKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCALLDM 486

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YA   S+KDAI+TF+EM ERN+V+WNAL+SA AQNGD + TLKSFE+M+ SGYQPDSVS 
Sbjct: 487 YANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSF 546

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L +L+ACSHC L+EEGL+YFN M+  Y L PK+EHY +MVD LCRSG FDEAEKLM QMP
Sbjct: 547 LCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMP 606

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPDEI+W+SV+NSCRIHKN   A+KAA QLF M+ LRDAAPYV MSNI+A AGQW+SV 
Sbjct: 607 FEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVV 666

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKAMR+RGVRK+ AYSWVE+K KVHVF+AND+ HPQ  EI RKIE L ++M+KEGY P
Sbjct: 667 KVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDP 726

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D SCA  + D+E K++SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK+IS
Sbjct: 727 DISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVIS 786

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GREITVRDS+RFHHF+DG CSC D+W
Sbjct: 787 KIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 190/393 (48%), Gaps = 39/393 (9%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY----- 250
           + A +VKT F       N ++   S+   + +AR+L  +MP  +  S +++I+ Y     
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 251 -----------------AW---------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
                            AW         + ++ ++ KLF E+  +    SQ  + T +++
Sbjct: 90  LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRS---GSQPDYVTYITL 146

Query: 285 VANKLDLQIGR---QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           +    DL++ +   Q H Q +        +V N+L+D Y K G  + A+ +F  +    +
Sbjct: 147 LTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDS 206

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V +  MI+ Y   G  EEA+ LF+EM          TFA+++ AS  L   + G+Q+H F
Sbjct: 207 VSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGF 266

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           V+++ F+ NVF G+A LD Y+K   + +  + F EMPE + VS+N +I+A A  G  + +
Sbjct: 267 VVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKES 326

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           +  F+++  + +   +    ++LS  +    ++ G Q  ++        P      S+VD
Sbjct: 327 IDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQ-LHAQVVVSMADPDFRVSNSLVD 385

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +  + G F+EA+++  ++      + W+++I++
Sbjct: 386 MYAKCGKFEEADRIFLRLS-SRSTVPWTAMISA 417


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score = 1078 bits (2787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/749 (66%), Positives = 614/749 (81%), Gaps = 1/749 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT S NM++SGYVKS NL  ARELF SM  R  VSWTI+IGGYSQ NQ +EAF L+
Sbjct: 72  MPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLY 131

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M    G  PD++TFATLLSG  +  T  E++Q+H+ II+FG+++ LI+ NSLVDSYCK
Sbjct: 132 TEM-CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCK 190

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CLD+A ++F EMP KDSVSFN +ITG+ K G  EEA+KLF++M+++ F+PS FTFAA 
Sbjct: 191 TCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAM 250

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   VG  D+  G+Q+H   +KT++V ++FVANALLD YSKHD +  A+ LF EMPE+DG
Sbjct: 251 LGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDG 310

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VSYN++IT YAWN QY++S  LF+ LQ T FDR  FPF+T+LSV A +L+L +GRQ H Q
Sbjct: 311 VSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQ 370

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +VTTA+SEV+V N+LVDMYAKC +FE+A  IFANL++ ++VPWTA+IS YVQKG  EEA
Sbjct: 371 AVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEA 430

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L +F EM R N+  DQATFAS L+ASA LAS+SLGKQLHS VIR G +S+VFSGS L+DM
Sbjct: 431 LKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDM 490

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YA  GS+KDAI+ FKEMP+RNIV WNALISA +QNGDA+AT  SF DM++SG  PDSVS 
Sbjct: 491 YANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSF 550

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LSVL+ACSH GL+E+ L YFNSMTQ YKL P+++HYA+M+D+LCRSG F+EAE L+++MP
Sbjct: 551 LSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMP 610

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPDE+MWSSV+NSCRIHKN + AKKAADQLFKM+ LRDAA YV MSNIYA AG+WE+ +
Sbjct: 611 FEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAA 670

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +VKKAMRERGV+KVTAYSWVE+  +VHVFTAND  HPQT +IRRKI +L++ M KEGYKP
Sbjct: 671 KVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKP 730

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTSC L + DEE+K+ESLKYHSERLAIAFALINTPEGSPI++MKNLRAC DCHAAIK+IS
Sbjct: 731 DTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVIS 790

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GREITVRDSSRFHHF+DG CSC D+W
Sbjct: 791 KIVGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 33/399 (8%)

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-------- 237
           G ++  +   V A +VKT F   +   N  L    + + + +AR+LF EMP         
Sbjct: 23  GFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNM 82

Query: 238 -VDG----------------------VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
            V G                      VS+ +MI  Y+ N Q KE+  L+ E+  +     
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              F+TLLS   +   L+   QIH+  I     + + V NSLVD Y K    + A ++F+
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +    +V +  MI+ Y + G  EEAL LF++M   +      TFA++L  S     +  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+Q+H   I++ ++ ++F  +ALLD Y+K   +  A   F EMPE + VS+N +I+  A 
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG  + +   F+ +  + +   +    ++LS  +    +  G Q          +   + 
Sbjct: 323 NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQV 382

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
             A +VD+  +   F++A ++ A + +  + + W+++I+
Sbjct: 383 GNA-LVDMYAKCEKFEDANRIFANLAYR-NSVPWTAIIS 419


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  970 bits (2507), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/752 (60%), Positives = 584/752 (77%), Gaps = 3/752 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++NTVSTN +ISG+VK+G++++AR+LF++M DRT V+WTIL+G Y++ + F EAFKLF
Sbjct: 74  MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133

Query: 61  VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NSILIICNSLVDS 117
             M R+   + PD+VTF TLL GC++    N + QVHA  +K G+  N  L + N L+ S
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YC++R LDLA  +F+E+P+KDSV+FN LITG+ K+GL  E+I LF++M+  G +PSDFTF
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +  L A VGL D ALG+Q+HA  V T F  +  V N +LD YSKHD V+E R LF EMPE
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           +D VSYNV+I+ Y+  +QY+ SL  FRE+Q   FDR  FPF+T+LS+ AN   LQ+GRQ+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H Q ++ TA S + V NSLVDMYAKC  FEEA+ IF +L   +TV WTA+IS YVQKG  
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
              L LF +M  +N+ ADQ+TFA++L+ASA  ASL LGKQLH+F+IRSG + NVFSGS L
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMYAK GS+KDA+Q F+EMP+RN VSWNALISA A NGD +A + +F  M++SG QPDS
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           VS+L VL+ACSHCG +E+G +YF +M+  Y + PKK+HYA M+D+L R+G F EAEKLM 
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MPFEPDEIMWSSV+N+CRIHKN   A++AA++LF MEKLRDAA YV+MSNIYA AG+WE
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
            V  VKKAMRERG++KV AYSWVE+  K+HVF++ND+ HP  +EI RKI  L  E+++EG
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           YKPDTS  + D DE++K+ESLKYHSERLA+AFALI+TPEG PI+VMKNLRAC DCHAAIK
Sbjct: 734 YKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIK 793

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LISKI  REITVRD+SRFHHF +G CSC D+W
Sbjct: 794 LISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 241/505 (47%), Gaps = 39/505 (7%)

Query: 86  PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           P T  +  +V A IIK G+++     N +V+   +   +  AR+V+ EMP K++VS N +
Sbjct: 26  PATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85

Query: 146 ITGFAKEG-------------------------------LNEEAIKLFVEMQHLG--FKP 172
           I+G  K G                                 +EA KLF +M        P
Sbjct: 86  ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145

Query: 173 SDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVF--VANALLDLYSKHDCVVEAR 229
              TF   L      +   A+G QVHAF VK  F  N F  V+N LL  Y +   +  A 
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF E+PE D V++N +IT Y  +  Y ES+ LF +++ +    S F FS +L  V    
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
           D  +G+Q+H  ++ T    +  V N ++D Y+K  R  E + +F  +  +  V +  +IS
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           +Y Q    E +L+ F EM           FA++L  +A L+SL +G+QLH   + +   S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            +  G++L+DMYAK    ++A   FK +P+R  VSW ALIS   Q G   A LK F  M 
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
            S  + D  +  +VL A +    +  G Q    + +   L       + +VD+  + G  
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSI 503

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINS 554
            +A ++  +MP + + + W+++I++
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/732 (61%), Positives = 561/732 (76%), Gaps = 3/732 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++NTVSTN +ISGYVK G+L++AR LF++M DRT V+WTIL+G Y+  N F EAFKLF
Sbjct: 70  MPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLF 129

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NSILIICNSLVDSY 118
             M     + PDYVTF TLL GC++    N + QVHA  +K G+  N  L +CN L+ SY
Sbjct: 130 RQM-CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSY 188

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           C++R LDLA  +F+E+  KDSV+FN LITG+ K+GL  EAI LF++M+  G KPSDFTF+
Sbjct: 189 CEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFS 248

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             L A VGL D ALG+Q+H   V T F  +  V N +L  YSKHD V+E R LF EMPE+
Sbjct: 249 GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL 308

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VSYNV+I+ Y+  EQY+ESL LFRE+Q   FDR  FPF+T+LS+ AN   LQ+GRQ+H
Sbjct: 309 DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVH 368

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q IV TA S + V NSLVDMYAKC  F+EA+ IF +LS  STV WTA+IS YVQKG   
Sbjct: 369 CQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG 428

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
             L LF +M  AN+ ADQ+TFA++L+ASA  ASL LGKQLH+F+IRSG + NVFSGS L+
Sbjct: 429 AGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLV 488

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMYAK GS+KDA+Q F+EMP+RN VSWNALISA A NGD +A + +F  M+QSG QPDSV
Sbjct: 489 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSV 548

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           S+L VL ACSHCG +E+G ++F +M+  Y + PKK+HYA M+D+L R+G F EAEKLM +
Sbjct: 549 SILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 608

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MPFEPDEIMWSSV+N+CRI+KN   A++AA+QLF MEKLRDAA YV+MSNIYA AG+WE+
Sbjct: 609 MPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWEN 668

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
           V  VKKAMRERG++KV AYSWVE+  K+HVF++ND+ HP  +EI +KI  L  E+++EGY
Sbjct: 669 VRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGY 728

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
           KPDTS  + D DE++K+ESLKYHSERLA+AFALI+TPEG PI+VMKNLRAC DCHAAIKL
Sbjct: 729 KPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKL 788

Query: 719 ISKITGREITVR 730
           ISKI  R IT +
Sbjct: 789 ISKIVKRVITTQ 800



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 243/514 (47%), Gaps = 40/514 (7%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T ATL     +P  A    +V A IIK G+N+     N  V+   +   +  A +V+ EM
Sbjct: 14  TLATLRQ-LRQPPPATR--RVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEM 70

Query: 135 PQKDSVSFNALITGFAKEG-------------------------------LNEEAIKLFV 163
           P K++VS N +I+G+ K G                                 +EA KLF 
Sbjct: 71  PHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFR 130

Query: 164 EMQHLGFKPSDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVF--VANALLDLYS 220
           +M      P   TF   L      +   A+G QVHAF VK  F  N+F  V N LL  Y 
Sbjct: 131 QMCRSCTLPDYVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNLFLTVCNVLLKSYC 189

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           +   +  A  LF E+ + D V++N +IT Y  +  Y E++ LF +++ +    S F FS 
Sbjct: 190 EVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSG 249

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L  V    D  +G+Q+H  ++ T    +  V N ++  Y+K  R  E + +F  +  + 
Sbjct: 250 VLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V +  +IS+Y Q    EE+LNLF EM           FA++L  +A L+SL +G+Q+H 
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHC 369

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             I +   S +  G++L+DMYAK     +A   FK + +R+ VSW ALIS   Q G   A
Sbjct: 370 QAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA 429

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            LK F  M  +  + D  +  +VL A +    +  G Q    + +   L       + +V
Sbjct: 430 GLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSGLV 488

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           D+  + G   +A ++  +MP + + + W+++I++
Sbjct: 489 DMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 521


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/751 (51%), Positives = 532/751 (70%), Gaps = 11/751 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N  S N+++S Y  SG+L  A+ LF S   R A +WTI++  ++   +  +A  LF
Sbjct: 69  MPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF 128

Query: 61  VDMRTDGGSDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
             M  +G   PD VT  T+L+  GC+ P        +H   IKFG ++ + +CN+L+D+Y
Sbjct: 129 RAMLGEG-VIPDRVTVTTVLNLPGCTVP-------SLHPFAIKFGLDTHVFVCNTLLDAY 180

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           CK   L  ARRVF EM  KD+V++NA++ G +KEGL+ +A++LF  M+  G   + FTF+
Sbjct: 181 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L+   G+A + LG QVHA V+++  V NVFV N+LLD YSK DC+ + R+LF EMPE 
Sbjct: 241 SILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 300

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VSYNV+I  YAWN+     L+LFRE+Q   FDR   P++T+LSV  +  D+ IG+QIH
Sbjct: 301 DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q ++    SE  + N+L+DMY+KCG  + AK  F+N S  S + WTA+I+ YVQ G  E
Sbjct: 361 AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE 420

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF +M RA +  D+ATF+SI++AS+ LA + LG+QLHS++IRSG+ S+VFSGS L+
Sbjct: 421 EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 480

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMYAK G L +A++TF EMPERN +SWNA+ISA A  G+A+  +K FE M+  G+ PDSV
Sbjct: 481 DMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSV 540

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + LSVL+ACSH GL +E ++YF+ M  +Y + P KEHYA ++D L R GCF + +K++ +
Sbjct: 541 TFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVE 600

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MPF+ D I+W+S+++SCRIH N E A+ AAD+LF ME   DA PYV +SNIYA AGQWE 
Sbjct: 601 MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPT-DATPYVILSNIYARAGQWED 659

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + VKK MR+RGVRK + YSWVE+K K++ F +ND   P  +EI+ +++ L +EM K+GY
Sbjct: 660 AACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGY 719

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
           KPD +CALH  D E+K+ESLKYHSERLAIAFAL+NTP G+PI +MKNL AC DCHA IK+
Sbjct: 720 KPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKM 779

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ISKI  R+I VRDS RFHHFKDG CSC D+W
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 232/484 (47%), Gaps = 28/484 (5%)

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
           A ++K G++ +    N  + S      L  AR +F +MP K+  S N +++ ++  G   
Sbjct: 32  ARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 91

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAG-----VGLADIALGRQV--------------- 196
            A  LF+   H           A  +AG     + L    LG  V               
Sbjct: 92  AAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG 151

Query: 197 ------HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
                 H F +K     +VFV N LLD Y KH  +  AR++F EM + D V+YN M+   
Sbjct: 152 CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGC 211

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           +    + ++L+LF  ++      + F FS++L+V A    L +G Q+H   + +T++  V
Sbjct: 212 SKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNV 271

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V NSL+D Y+KC   ++ + +F  +     V +  +I+AY         L LF EM + 
Sbjct: 272 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 331

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
                   +A++L  +  L  + +GKQ+H+ ++  G  S    G+AL+DMY+K G L  A
Sbjct: 332 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 391

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F    E++ +SW ALI+   QNG  +  L+ F DM ++G +PD  +  S++ A S  
Sbjct: 392 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSL 451

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            +I  G Q  +S   +   +      + +VD+  + GC DEA +   +MP E + I W++
Sbjct: 452 AMIGLGRQ-LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNA 509

Query: 551 VINS 554
           VI++
Sbjct: 510 VISA 513


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/751 (51%), Positives = 532/751 (70%), Gaps = 11/751 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N  S N+++S Y  SG+L  A+ LF S   R A +WTI++  ++   +  +A  LF
Sbjct: 69  MPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF 128

Query: 61  VDMRTDGGSDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
             M  +G   PD VT  T+L+  GC+ P        +H   IKFG ++ + +CN+L+D+Y
Sbjct: 129 RAMLGEG-VIPDRVTVTTVLNLPGCTVP-------SLHPFAIKFGLDTHVFVCNTLLDAY 180

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           CK   L  ARRVF EM  KD+V++NA++ G +KEGL+ +A++LF  M+  G   + FTF+
Sbjct: 181 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L+   G+A + LG QVHA V+++  V NVFV N+LLD YSK DC+ + R+LF EMPE 
Sbjct: 241 SILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 300

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VSYNV+I  YAWN+     L+LFRE+Q   FDR   P++T+LSV  +  D+ IG+QIH
Sbjct: 301 DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q ++    SE  + N+L+DMY+KCG  + AK  F+N S  S + WTA+I+ YVQ G  E
Sbjct: 361 AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE 420

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF +M RA +  D+ATF+SI++AS+ LA + LG+QLHS++IRSG+ S+VFSGS L+
Sbjct: 421 EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 480

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMYAK G L +A++TF EMPERN +SWNA+ISA A  G+A+  +K FE M+  G+ PDSV
Sbjct: 481 DMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSV 540

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + LSVL+ACSH GL +E ++YF+ M  +Y + P KEHYA ++D L R GCF + +K++ +
Sbjct: 541 TFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVE 600

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MPF+ D I+W+S+++SCRIH N E A+ AAD+LF ME   DA PYV +SNIYA AGQWE 
Sbjct: 601 MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEP-TDATPYVILSNIYARAGQWED 659

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + VKK MR+RGVRK + YSWVE+K K++ F +ND   P  +EI+ +++ L +EM K+GY
Sbjct: 660 AACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGY 719

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
           KPD +CALH  D E+K+ESLKYHSERLAIAFAL+NTP G+PI +MKNL AC DCHA IK+
Sbjct: 720 KPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKM 779

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ISKI  R+I VRDS RFHHFKDG CSC D+W
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 232/484 (47%), Gaps = 28/484 (5%)

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
           A ++K G++ +    N  + S      L  AR +F +MP K+  S N +++ ++  G   
Sbjct: 32  ARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 91

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAG-----VGLADIALGRQV--------------- 196
            A  LF+   H           A  +AG     + L    LG  V               
Sbjct: 92  AAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG 151

Query: 197 ------HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
                 H F +K     +VFV N LLD Y KH  +  AR++F EM + D V+YN M+   
Sbjct: 152 CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGC 211

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           +    + ++L+LF  ++      + F FS++L+V A    L +G Q+H   + +T++  V
Sbjct: 212 SKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNV 271

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V NSL+D Y+KC   ++ + +F  +     V +  +I+AY         L LF EM + 
Sbjct: 272 FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKL 331

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
                   +A++L  +  L  + +GKQ+H+ ++  G  S    G+AL+DMY+K G L  A
Sbjct: 332 GFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAA 391

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F    E++ +SW ALI+   QNG  +  L+ F DM ++G +PD  +  S++ A S  
Sbjct: 392 KSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSL 451

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            +I  G Q  +S   +   +      + +VD+  + GC DEA +   +MP E + I W++
Sbjct: 452 AMIGLGRQ-LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNA 509

Query: 551 VINS 554
           VI++
Sbjct: 510 VISA 513


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/758 (52%), Positives = 530/758 (69%), Gaps = 12/758 (1%)

Query: 1   MPNQNTV-STNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFR--E 55
           MP++N   S N ++SGY +SG L+ A  LF S     R AV+WT++IG ++     R  +
Sbjct: 60  MPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASD 119

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLS-GCSEPDTANELI--QVHADIIKFGY-NSILIIC 111
           A  LF DM  +G + PD VT AT+L+   +   TA  +I   +H   +K G  +S +++C
Sbjct: 120 AVSLFRDMLREGVA-PDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVC 178

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+D+YCK   L  ARRVF+EMP +DSV++NA++ G +KEG + EA+ LF  M+  G  
Sbjct: 179 NTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLA 238

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
            + FTF+  L+   G+ D+ LGRQVH  V +     NVFV N+LLD YSK DC+ E +KL
Sbjct: 239 ATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKL 297

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F EM E D VSYNVMI  YAWN      L+LFRE+Q   FDR   P+++LLSV  +   +
Sbjct: 298 FHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHI 357

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            IG+QIH Q ++    SE  V N+L+DMY+KCG  + AK  F N +  + V WTAMI+  
Sbjct: 358 GIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGC 417

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           VQ G  EEAL LF  M RA +S D+ATF+S ++AS+ LA + LG+QLHS++IRSG MS+V
Sbjct: 418 VQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSV 477

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           FSGSALLDMY K G L +A+QTF EMPERN +SWNA+ISA A  G A+  +K FE M+  
Sbjct: 478 FSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCY 537

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G++PDSV+ LSVLSACSH GL EE ++YF  M  +Y + P KEHY+ ++D L R G FD+
Sbjct: 538 GFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDK 597

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
            ++++ +MPFE D I+WSS+++SCR H N + A+ AA++LF M    DA PYV +SNI+A
Sbjct: 598 VQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGS-TDATPYVILSNIFA 656

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG+WE  + VKK MR+RG+RK T YSWVE+K KV+ F++ND+ +P   EI+ ++E L +
Sbjct: 657 KAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYK 716

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           EM K+GYKPDTSC L   D++IK+ESLKYHSERLAIAFALINTP G+PI VMKNL AC D
Sbjct: 717 EMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVD 776

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+AIK++SKI  R+I VRDSSRFHHFKDGFCSC D+W
Sbjct: 777 CHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/751 (50%), Positives = 514/751 (68%), Gaps = 27/751 (3%)

Query: 1    MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
            MP++N  S N+++S Y  SG+L  A+ LF S   R A +WTI++  ++   +  +A  LF
Sbjct: 283  MPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF 342

Query: 61   VDMRTDGGSDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
              M  +G   PD VT  T+L+  GC+ P        +H   IKFG ++ + +CN+L+D+Y
Sbjct: 343  RAMLGEG-VIPDRVTVTTVLNLPGCTVP-------SLHPFAIKFGLDTHVFVCNTLLDAY 394

Query: 119  CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            CK   L  ARRVF EM  KD+V++NA++ G +KEGL+ +A++LF  M+  G+        
Sbjct: 395  CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLL 454

Query: 179  AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
                            Q      ++  V NVFV N+LLD YSK DC+ + R+LF EMPE 
Sbjct: 455  ----------------QYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 498

Query: 239  DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
            D VSYNV+I  YAWN+     L+LFRE+Q   FDR   P++T+LSV  +  D+ IG+QIH
Sbjct: 499  DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 558

Query: 299  TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             Q ++    SE  + N+L+DMY+KCG  + AK  F+N S  S + WTA+I+ YVQ G  E
Sbjct: 559  AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE 618

Query: 359  EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
            EAL LF +M RA +  D+ATF+SI++AS+ LA + LG+QLHS++IRSG+ S+VFSGS L+
Sbjct: 619  EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 678

Query: 419  DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            DMYAK G L +A++TF EMPERN +SWNA+ISA A  G+A+  +K FE M+  G+ PDSV
Sbjct: 679  DMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSV 738

Query: 479  SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
            + LSVL+ACSH GL +E ++YF+ M  +Y + P KEHYA ++D L R GCF + +K++ +
Sbjct: 739  TFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVE 798

Query: 539  MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
            MPF+ D I+W+S+++SCRIH N E A+ AAD+LF ME   DA PYV +SNIYA AGQWE 
Sbjct: 799  MPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPT-DATPYVILSNIYARAGQWED 857

Query: 599  VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
             + VKK MR+RGVRK + YSWVE+K K++ F +ND   P  +EI+ +++ L +EM K+GY
Sbjct: 858  AACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGY 917

Query: 659  KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            KPD +CALH  D E+K+ESLKYHSERLAIAFAL+NTP G+PI +MKNL AC DCHA IK+
Sbjct: 918  KPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKM 977

Query: 719  ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ISKI  R+I VRDS RFHHFKDG CSC D+W
Sbjct: 978  ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 213/457 (46%), Gaps = 44/457 (9%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  AR +F +MP K+  S N +++ ++  G    A  LF+   H           A  +A
Sbjct: 273 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAA 332

Query: 184 G-----VGLADIALGRQV---------------------HAFVVKTNFVENVFVANALLD 217
           G     + L    LG  V                     H F +K     +VFV N LLD
Sbjct: 333 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLD 392

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
            Y KH  +  AR++F EM + D V+YN M+   +    + ++L+LF  ++   + R    
Sbjct: 393 AYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHP-- 450

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
                        L + +  H+++  +T++  V V NSL+D Y+KC   ++ + +F  + 
Sbjct: 451 -------------LHLLQYSHSRS-RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 496

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V +  +I+AY         L LF EM +         +A++L  +  L  + +GKQ
Sbjct: 497 ERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQ 556

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+ ++  G  S    G+AL+DMY+K G L  A   F    E++ +SW ALI+   QNG 
Sbjct: 557 IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 616

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F DM ++G +PD  +  S++ A S   +I  G Q  +S   +   +      +
Sbjct: 617 HEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ-LHSYLIRSGYKSSVFSGS 675

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +VD+  + GC DEA +   +MP E + I W++VI++
Sbjct: 676 VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 711



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 49/303 (16%)

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE-----------MCRANI 372
           G    A+ +F  + H +      ++SAY   G+L  A +LF+            M RA+ 
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330

Query: 373 SADQATFA-SILRAS---------------AELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           +A + + A S+ RA                  L   ++   LH F I+ G  ++VF  + 
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-PSLHPFAIKFGLDTHVFVCNT 389

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           LLD Y K G L  A + F EM +++ V++NA++  C++ G     L+ F  M ++GY   
Sbjct: 390 LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRH 449

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            + L                LQY +S ++   +     +  S++D   +  C D+  +L 
Sbjct: 450 PLHL----------------LQYSHSRSRSTSVLNVFVN-NSLLDFYSKCDCLDDMRRLF 492

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            +MP E D + ++ +I +   ++      +   ++ K+   R   PY  M    +VAG  
Sbjct: 493 DEMP-ERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATM---LSVAGSL 548

Query: 597 ESV 599
             V
Sbjct: 549 PDV 551


>gi|255543567|ref|XP_002512846.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547857|gb|EEF49349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 553

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/479 (68%), Positives = 396/479 (82%), Gaps = 1/479 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++NTVS NM+I GYVK  NL+ ARELF+SMVDRTAV+WTILIGGY Q +QF EAFKLF
Sbjct: 72  MPHKNTVSVNMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQFSEAFKLF 131

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M  DG   PDYVTFATLLSGC++P+   EL QVH  ++K G+ S +IICNSLVDSYCK
Sbjct: 132 SNMIRDG-KKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIICNSLVDSYCK 190

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  LDLA R+FKEM ++DSV++NALITG+ KEGLNE+AI+LF +MQ+LGF+PSDFTF A 
Sbjct: 191 MHRLDLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAV 250

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A +GL DI  G+Q+H + VK   V NVFV N+LLD YSKHDCV +A KLF +MPE+DG
Sbjct: 251 LCACIGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELDG 310

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VSYNVMIT Y+W  QY+ES+ LFRELQFT+F+R  FPF+T+LS+  N LDLQ+G+Q+H+ 
Sbjct: 311 VSYNVMITAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSH 370

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            IVT A  EV VANSLVDMYAKCGR E A+ IF  LS  STVPWTA+ISA VQKG LEE 
Sbjct: 371 AIVTGADLEVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEG 430

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF EM R N+SADQATFAS+L+ASA LAS+SLGKQLHS++IRSGF SNV+SGSAL+DM
Sbjct: 431 LKLFNEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSGSALVDM 490

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           YAK GS+K+AI+TFKEMP RN++SWNALISA AQNGD +ATLKSFE+MV SGYQPDS++
Sbjct: 491 YAKCGSVKEAIRTFKEMPGRNVISWNALISAYAQNGDGEATLKSFEEMVLSGYQPDSLA 549



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 223/446 (50%), Gaps = 8/446 (1%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N ++  Y K R L +AR +F  M  + +V++  LI G+ +     EA KLF  M   G K
Sbjct: 81  NMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQFSEAFKLFSNMIRDGKK 140

Query: 172 PSDFTFAAALSAGVGLADIALGR---QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           P   TFA  LS   G  D  + +   QVH  VVK      V + N+L+D Y K   +  A
Sbjct: 141 PDYVTFATLLS---GCNDPEMTKELFQVHTHVVKLGHGSAVIICNSLVDSYCKMHRLDLA 197

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
            ++F EM E D V+YN +IT Y      +++++LF ++Q   F+ S F F  +L      
Sbjct: 198 HRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAVLCACIGL 257

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            D+  G+QIH   +    +  V V NSL+D Y+K     +A ++F+ +  +  V +  MI
Sbjct: 258 DDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELDGVSYNVMI 317

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           +AY   G   E+++LF E+           FA++L  +     L +G+QLHS  I +G  
Sbjct: 318 TAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSHAIVTGAD 377

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
             V   ++L+DMYAK G  + A + F ++  ++ V W ALISA  Q G  +  LK F +M
Sbjct: 378 LEVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEGLKLFNEM 437

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
            ++    D  +  SVL A ++   I  G Q  +S   +          +++VD+  + G 
Sbjct: 438 RRTNVSADQATFASVLKASANLASISLGKQ-LHSYLIRSGFWSNVYSGSALVDMYAKCGS 496

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINS 554
             EA +   +MP   + I W+++I++
Sbjct: 497 VKEAIRTFKEMPGR-NVISWNALISA 521



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 219/495 (44%), Gaps = 49/495 (9%)

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +N    N ++  Y K   +  AR+LF  M +   V++ ++I  Y   +Q+ E+ KLF  +
Sbjct: 75  KNTVSVNMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQFDQFSEAFKLFSNM 134

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
                      F+TLLS   +    +   Q+HT  +     S V + NSLVD Y K  R 
Sbjct: 135 IRDGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIICNSLVDSYCKMHRL 194

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           + A  IF  +    +V + A+I+ Y ++G  E+A+ LF +M          TF ++L A 
Sbjct: 195 DLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAVLCAC 254

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
             L  +  G+Q+H + ++ G + NVF G++LLD Y+K   + DA + F +MPE + VS+N
Sbjct: 255 IGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELDGVSYN 314

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF------ 500
            +I+A +  G  + ++  F ++  + ++  +    ++LS   +   ++ G Q        
Sbjct: 315 VMITAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSHAIVT 374

Query: 501 ---------NSMTQKYKLRPKKEH---------------YASMVDILCRSGCFDEAEKLM 536
                    NS+   Y    + E+               + +++    + G  +E  KL 
Sbjct: 375 GADLEVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEGLKLF 434

Query: 537 AQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
            +M       D+  ++SV+ +     ++   K+    L +     +     A+ ++YA  
Sbjct: 435 NEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSGSALVDMYAKC 494

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G   SV +  +  +E   R V   SW  L S           + Q  +    +++  +EM
Sbjct: 495 G---SVKEAIRTFKEMPGRNVI--SWNALISA----------YAQNGDGEATLKSF-EEM 538

Query: 654 KKEGYKPDTSCALHD 668
              GY+PD+  A+ D
Sbjct: 539 VLSGYQPDSLAAIVD 553



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 133/320 (41%), Gaps = 37/320 (11%)

Query: 270 RFDRSQFPFSTLLSVVA----NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +    Q PF  L S+ A    NK     G  I  + + T        +N  V    + G+
Sbjct: 2   KLPHRQIPFKNLASLSASQPQNKSYHNAGIFIDARIVKTGFNPITSRSNYQVKSLLQRGQ 61

Query: 326 FEEAKEIFANLSHISTVP-------------------------------WTAMISAYVQK 354
             EA+++F  + H +TV                                WT +I  Y Q 
Sbjct: 62  LSEARDLFDQMPHKNTVSVNMMILGYVKERNLSIARELFDSMVDRTAVTWTILIGGYCQF 121

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
               EA  LF  M R     D  TFA++L    +        Q+H+ V++ G  S V   
Sbjct: 122 DQFSEAFKLFSNMIRDGKKPDYVTFATLLSGCNDPEMTKELFQVHTHVVKLGHGSAVIIC 181

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++L+D Y K   L  A + FKEM ER+ V++NALI+   + G  +  ++ F  M   G++
Sbjct: 182 NSLVDSYCKMHRLDLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFE 241

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P   +  +VL AC     I  G Q  +    K  L        S++D   +  C ++A K
Sbjct: 242 PSDFTFQAVLCACIGLDDIIFG-QQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWK 300

Query: 535 LMAQMPFEPDEIMWSSVINS 554
           L ++MP E D + ++ +I +
Sbjct: 301 LFSKMP-ELDGVSYNVMITA 319


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 305/660 (46%), Positives = 449/660 (68%), Gaps = 10/660 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++ G  +S +L+ A+ LF++   R A +WTI++       +  +A  LF DM  +G +
Sbjct: 75  NRILLGCSRSCDLSAAKALFSAAARRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEA 134

Query: 70  DPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            PD VT  T+L+  GC       ++  +H  + K G+ + +++CN+L+D+YCK   +  A
Sbjct: 135 SPDDVTITTVLNVPGC-------DVGTLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAA 187

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RRVF EMP +DS+++NA+I G +++G + EA++LF  M+  G   S FTF++ L+   G+
Sbjct: 188 RRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGM 247

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+ LGRQ+H   V+ N   NVFV NALLD YSK D + + ++LF EM E D VSYNVMI
Sbjct: 248 VDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMI 307

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +WN     +L+LFR++Q   FDR   P+++LLSV      ++IGRQIH Q I+    
Sbjct: 308 SACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLT 367

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            E  V N+L+DMY+KCG  + AK IFA  S  + + WTA+I+  VQ G  EEAL LF +M
Sbjct: 368 LEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDM 427

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            RA +S D+AT +SI+++S+ LA + +G+QLH+++ +SG M +VFSGSALLDMYAK G L
Sbjct: 428 RRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCL 487

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +AI+TF EMPE+N ++WNA+ISA AQ G A+  ++ F+ M+  G  PD V+ LSVL+AC
Sbjct: 488 DEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAAC 547

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            H GL EE ++YF+ M   Y + P KEHY+ ++D L R+GCFD+ +K++ +MPFE D I+
Sbjct: 548 GHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPII 607

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           WSS+++SCRI+ N + A  AA++LF M    DA  YV +SNIYA AG WE  ++VKK MR
Sbjct: 608 WSSILHSCRIYGNQDLATVAAEKLFTMVPT-DATAYVILSNIYAKAGNWEGAARVKKIMR 666

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +RGV+K +  SWVE+K K+++F++ND  +P  +EI++++E L +EM K+GY+PDTSCALH
Sbjct: 667 DRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPDTSCALH 726



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 236/507 (46%), Gaps = 55/507 (10%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+ N    N L+  Y K  +L   ++LF+ M +R  VS+ ++I   S       A +LF 
Sbjct: 265 PSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFR 324

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           DM+T  G D   + +A+LLS            Q+HA +I  G      + N+L+D Y K 
Sbjct: 325 DMQTL-GFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKC 383

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             LD A+ +F     K ++S+ ALITG  + G NEEA++LF +M+  G  P   T ++ +
Sbjct: 384 GMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIM 443

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            +   LA I +GRQ+HA++ K+  + +VF  +ALLD+Y+K  C+ EA + F EMPE + +
Sbjct: 444 KSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSI 503

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA-NKLDLQIGRQIHTQ 300
           ++N +I+ YA   Q K ++++F  +           F ++L+    N L  +  +     
Sbjct: 504 TWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLM 563

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
               +     +  + ++D   + G F++ +++   +      + W++++ +         
Sbjct: 564 RYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHS--------- 614

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
                   CR   + D AT A      AE     +     ++VI    +SN+        
Sbjct: 615 --------CRIYGNQDLATVA------AEKLFTMVPTDATAYVI----LSNI-------- 648

Query: 420 MYAKSGSLKDAIQTFKEMPERNIV-----SWNAL---ISACAQNGDAQATL--------K 463
            YAK+G+ + A +  K M +R +      SW  +   I   + N      +        +
Sbjct: 649 -YAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELER 707

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHC 490
            +E+M + GY+PD+   L ++S   +C
Sbjct: 708 LYEEMDKQGYEPDTSCALHMVSMVFYC 734


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 289/740 (39%), Positives = 456/740 (61%), Gaps = 2/740 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N +++ Y K G++  ARE+F+ M  ++ VSWTI+IGGY+       AF++F  M+ +G  
Sbjct: 283  NCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG-V 341

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             P+ +T+  +L+  S P        VH+ I+  G+ S L +  +LV  Y K       R+
Sbjct: 342  VPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQ 401

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF+++  +D +++N +I G A+ G  EEA +++ +MQ  G  P+  T+   L+A V    
Sbjct: 402  VFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTA 461

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            +  GR++H+ VVK  F+ ++ V NAL+ +Y++   + +AR LF +M   D +S+  MI  
Sbjct: 462  LHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGG 521

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
             A +    E+L +F+++Q      ++  ++++L+  ++   L  GR+IH Q I     ++
Sbjct: 522  LAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581

Query: 310  VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
              VAN+LV+MY+ CG  ++A+++F  ++    V + AMI  Y      +EAL LF  +  
Sbjct: 582  AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 641

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
              +  D+ T+ ++L A A   SL   K++HS V++ G++S+   G+AL+  YAK GS  D
Sbjct: 642  EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSD 701

Query: 430  AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            A+  F +M +RN++SWNA+I  CAQ+G  Q  L+ FE M   G +PD V+ +S+LSACSH
Sbjct: 702  ALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSH 761

Query: 490  CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             GL+EEG +YF SM++ + + P  EHY  MVD+L R+G  DE E L+  MPF+ +  +W 
Sbjct: 762  AGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWG 821

Query: 550  SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            +++ +CRIH N+  A++AA+   K++   +AA YVA+S++YA AG W+S ++++K M +R
Sbjct: 822  ALLGACRIHGNVPVAERAAESSLKLDP-DNAAVYVALSHMYAAAGMWDSAAKLRKLMEQR 880

Query: 610  GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            GV K    SW+E+  K+H F A D  HP++ +I  +++ L   MK EGY PDT   +HD 
Sbjct: 881  GVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDV 940

Query: 670  DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            DE  K  ++ +HSERLAIA+ LI+T  G+PI + KNLR C DCH A K I+KI  REI  
Sbjct: 941  DEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVA 1000

Query: 730  RDSSRFHHFKDGFCSCRDFW 749
            RD +RFHHFKDG CSC D+W
Sbjct: 1001 RDVNRFHHFKDGVCSCGDYW 1020



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 302/577 (52%), Gaps = 9/577 (1%)

Query: 8   STNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           + N LI+ Y++ G++  AR+++N +   +RT  SW  ++ GY Q     EA KL  +M+ 
Sbjct: 178 TVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQ 237

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G +     T   LLS C  P       ++H + +K      + + N +++ Y K   + 
Sbjct: 238 HGLALGRATTM-RLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIH 296

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR VF +M  K  VS+  +I G+A  G +E A ++F +MQ  G  P+  T+   L+A  
Sbjct: 297 EAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           G A +  G+ VH+ ++      ++ V  AL+ +Y+K     + R++F ++   D +++N 
Sbjct: 357 GPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 416

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI   A    ++E+ +++ ++Q      ++  +  LL+   N   L  GR+IH++ +   
Sbjct: 417 MIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG 476

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            + ++ V N+L+ MYA+CG  ++A+ +F  +     + WTAMI    + G   EAL +F 
Sbjct: 477 FMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQ 536

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A +  ++ T+ SIL A +  A+L  G+++H  VI +G  ++    + L++MY+  G
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S+KDA Q F  M +R+IV++NA+I   A +   +  LK F+ + + G +PD V+ +++L+
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC++ G +E   +  +S+  K           ++V    + G F +A  +  +M  + + 
Sbjct: 657 ACANSGSLEWAKE-IHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNV 714

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           I W+++I  C  H       +   QLF+  K+    P
Sbjct: 715 ISWNAIIGGCAQHGR----GQDVLQLFERMKMEGIKP 747



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 264/546 (48%), Gaps = 61/546 (11%)

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           + A+ +   +Q  G + +   +   L   + + D+  GR+VH  +++   V + +  NAL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGV--SYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +++Y +   + EAR+++ ++   +    S+N M+  Y      +E+LKL RE+Q      
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +     LLS   +   L+ GR+IH + +    + +V VAN +++MYAKCG   EA+E+F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   S V WT +I  Y   G+ E A  +F +M +  +  ++ T+ ++L A +  A+L 
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            GK +HS ++ +G  S++  G+AL+ MYAK GS KD  Q F+++  R++++WN +I   A
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-------------------------- 487
           + G+ +   + +  M + G  P+ ++ + +L+AC                          
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482

Query: 488 ---------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL--- 535
                    + CG I++    FN M +K  +      + +M+  L +SG   EA  +   
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIIS-----WTAMIGGLAKSGLGAEALAVFQD 537

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           M Q   +P+ + ++S++N+C     L++ ++   Q+ +     DA     + N+Y++ G 
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
            +   QV   M +R +        V   + +  + A++        + ++   L   +++
Sbjct: 598 VKDARQVFDRMTQRDI--------VAYNAMIGGYAAHN--------LGKEALKLFDRLQE 641

Query: 656 EGYKPD 661
           EG KPD
Sbjct: 642 EGLKPD 647


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 292/745 (39%), Positives = 454/745 (60%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI  +   GN+  AR+ F+S+ ++T V+W  +I GY+Q    +EAF LF  M 
Sbjct: 95  NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQM- 153

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D   +P  +TF  +L  CS P       + HA +IK G+ S   I  +LV  Y K   +
Sbjct: 154 VDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSM 213

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D AR+VF  + ++D  +FN +I G+AK G  E+A +LF  MQ  GFKP+  +F + L   
Sbjct: 214 DGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGC 273

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +A G+ VHA  + T  V++V VA AL+ +Y     +  AR++F +M   D VS+ 
Sbjct: 274 STPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWT 333

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VMI  YA N   +++  LF  +Q       +  +  +++  A+  DL + R+IH+Q +  
Sbjct: 334 VMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRA 393

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              +++ V  +LV MYAKCG  ++A+++F  +S    V W+AMI AYV+ G  EEA   F
Sbjct: 394 GFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETF 453

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M R N+  D  T+ ++L A   L +L LG ++++  I++  +S++  G+AL++M  K 
Sbjct: 454 HLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKH 513

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++ A   F+ M +R++V+WN +I   + +G+A+  L  F+ M++  ++P+SV+ + VL
Sbjct: 514 GSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVL 573

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACS  G +EEG ++F+ +     + P  E Y  MVD+L R+G  DEAE L+ +MP +P+
Sbjct: 574 SACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPN 633

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +WS+++ +CRI+ NL+ A++AA++   M +  D A YV +S++YA AG WE+V++V+K
Sbjct: 634 SSIWSTLLAACRIYGNLDVAERAAERCL-MSEPYDGAVYVQLSHMYAAAGMWENVAKVRK 692

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M  RGVRK    +W+E++ K+H F   D  HPQ  EI  ++  LM  +K+EGY P T  
Sbjct: 693 VMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQN 752

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LH+  E+ K E++ YHSE+LAIA+ +++ P G+PI + KNLR C DCH+A K ISK+TG
Sbjct: 753 VLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTG 812

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI  RD+SRFHHFK+G CSC D+W
Sbjct: 813 REIIARDASRFHHFKNGVCSCGDYW 837



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 236/514 (45%), Gaps = 59/514 (11%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  LG+QV   ++++    N++  N L+ L+S    ++EAR+ F  +     V++N +
Sbjct: 74  LRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAI 133

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA     KE+  LFR++     + S   F  +L   ++   L++G++ H Q I    
Sbjct: 134 IAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF 193

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +S+ ++  +LV MY K G  + A+++F  L       +  MI  Y + G+ E+A  LF  
Sbjct: 194 VSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYR 253

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M +     ++ +F SIL   +   +L+ GK +H+  + +G + +V   +AL+ MY   GS
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGS 313

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ A + F +M  R++VSW  +I   A+N + +     F  M + G QPD ++ + +++A
Sbjct: 314 IEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINA 373

Query: 487 C-----------------------------------SHCGLIEEGLQYFNSMTQKYKLRP 511
           C                                   + CG I++  Q F++M+++  +  
Sbjct: 374 CASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVV-- 431

Query: 512 KKEHYASMVDILCRSGCFDEAEK---LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
               +++M+     +GC +EA +   LM +   EPD + + +++N+C     L+   +  
Sbjct: 432 ---SWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIY 488

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            Q  K + +       A+ N+    G  E    + + M +R V      +W       +V
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDV-----VTW-------NV 536

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
                 LH       R+  +L   M KE ++P++
Sbjct: 537 MIGGYSLHGNA----REALDLFDRMLKERFRPNS 566



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 129/327 (39%), Gaps = 51/327 (15%)

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T+  + +    L    LGKQ+   +I+SG   N++  + L+ +++  G++ +A QTF
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             +  + +V+WNA+I+  AQ G  +     F  MV    +P  ++ L VL ACS    ++
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL------------------- 535
            G + F++   K           ++V +  + G  D A ++                   
Sbjct: 180 LGKE-FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 536 ---------------MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
                          M Q  F+P+ I + S+++ C   + L + K    Q      + D 
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
               A+  +Y   G  E   +V   M+ R V      SW  +   +  +  N  +     
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVRDV-----VSWTVM---IRGYAENSNIEDAF- 349

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALH 667
                   L   M++EG +PD    +H
Sbjct: 350 -------GLFATMQEEGIQPDRITYIH 369


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 299/742 (40%), Positives = 463/742 (62%), Gaps = 2/742 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N+L++ YVK  +L  A +LF+ M DR  VS+  LI GYSQ  +F EA  LF  ++ +G
Sbjct: 81  ANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEG 140

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                +V F+T+L      + A     VHA + K G++S   +  +L+D Y      + A
Sbjct: 141 HELNPFV-FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECA 199

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  +  KD VS+  ++  + +    EE++KLF  M+ +GFKP++FTFA+ L A VGL
Sbjct: 200 RQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGL 259

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               +G+ VH    KT+++E +FV   L+DLY K   V +A ++F EMP+ D + ++ MI
Sbjct: 260 EVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMI 319

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA +EQ +E++++F  ++      +QF  ++LL   A+ +DLQ+G QIH   +     
Sbjct: 320 ARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLD 379

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V V+N+L+DMYAKCGR E + ++F+   + + V W  +I  YVQ GN E+AL LF +M
Sbjct: 380 MNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDM 439

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +   + T++S+LRA A +A+L  G Q+HS  +++ +  N   G+AL+DMYAK G++
Sbjct: 440 LECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNI 499

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           KDA   F  + E + VSWNA+IS  + +G     LK+FE M+++  +PD V+ + +LSAC
Sbjct: 500 KDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSAC 559

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S+ GL++ G  YF SM ++Y + P  EHY  MV +L RSG  D+A KL+ ++PFEP  ++
Sbjct: 560 SNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMV 619

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++C IH ++E  + +A ++ ++E   D A +V +SNIYA A +W +V+ ++ +M+
Sbjct: 620 WRALLSACVIHNDVELGRISAQRVLEIEP-EDEATHVLLSNIYANARRWGNVASIRTSMK 678

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            +G+RK    SW+E + +VH F+  D  HP T  I   +E L  + + EGY PD S  L 
Sbjct: 679 RKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLL 738

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D ++  K + L  HSERLA+A+ LI TP  SP+ ++KNLR C DCHAAIKLISKI  R+I
Sbjct: 739 DVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDI 798

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF +G CSC D+W
Sbjct: 799 IIRDMNRFHHFHEGICSCGDYW 820



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 175/551 (31%), Positives = 279/551 (50%), Gaps = 5/551 (0%)

Query: 60  FVDMRTDGGSDPDYVTF--ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           F+  RT   S P++ T+   +LL  C           +H +IIK G    L   N L++ 
Sbjct: 30  FLAQRTSH-SSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNF 88

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   L  A ++F EMP +++VSF  LI G+++     EAI LF  +Q  G + + F F
Sbjct: 89  YVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVF 148

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +  L   V      LG  VHA V K  F  + FV  AL+D YS       AR++F  +  
Sbjct: 149 STVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY 208

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D VS+  M+ CY  NE ++ESLKLF  ++   F  + F F+++L          +G+ +
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAV 268

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H     T+ + E+ V   L+D+Y K G  ++A ++F  +     +PW+ MI+ Y Q    
Sbjct: 269 HGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQS 328

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           EEA+ +F  M R  +  +Q T AS+L+A A L  L LG Q+H  V++ G   NVF  +AL
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMYAK G +++++Q F E P    VSWN +I    Q G+ +  L  F+DM++   Q   
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           V+  SVL AC+    +E G Q  +S++ K           +++D+  + G   +A +L+ 
Sbjct: 449 VTYSSVLRACAGIAALEPGSQ-IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA-RLVF 506

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            M  E D++ W+++I+   +H     A K  + + + E   D   +V + +  + AG  +
Sbjct: 507 DMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLD 566

Query: 598 SVSQVKKAMRE 608
                 K+M E
Sbjct: 567 RGQAYFKSMVE 577



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 3/189 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +N L+  Y K G +  + +LF+   + T VSW  +I GY Q     +A  LF D
Sbjct: 379 DMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKD 438

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +       VT++++L  C+         Q+H+  +K  Y+   ++ N+L+D Y K  
Sbjct: 439 M-LECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCG 497

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR VF  + + D VS+NA+I+G++  GL  EA+K F  M     KP   TF   LS
Sbjct: 498 NIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILS 557

Query: 183 A--GVGLAD 189
           A    GL D
Sbjct: 558 ACSNAGLLD 566


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 291/717 (40%), Positives = 427/717 (59%), Gaps = 2/717 (0%)

Query: 33  VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANEL 92
           +   AV W   I GY +   + +A +L+  M+  G  +PD + F +++  C         
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKACGSQSDLQAG 139

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
            +VH DII  G+ S +I+  +L   Y K   L+ AR+VF  MP++D VS+NA+I G+++ 
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G   EA+ LF EMQ  G KP+  T  + +     L  +  G+Q+H + +++    +V V 
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N L+++Y+K   V  A KLF  MP  D  S+N +I  Y+ N Q+ E+L  F  +Q     
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            +     ++L   A+   L+ G+QIH   I +   S   V N+LV+MYAKCG    A ++
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   + V W A+IS Y Q G+  EAL LFIEM    I  D     S+L A A   +L
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GKQ+H + IRSGF SNV  G+ L+D+YAK G++  A + F+ MPE+++VSW  +I A 
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             +G  +  L  F  M ++G + D ++  ++L+ACSH GL+++GLQYF  M   Y L PK
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHYA +VD+L R+G  DEA  ++  M  EPD  +W +++ +CRIH N+E  ++AA  LF
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLF 619

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           +++   +A  YV +SNIYA A +WE V++++K M+E+GV+K    S V +   V  F   
Sbjct: 620 ELDP-DNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVG 678

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HPQ+ +I   +E L ++M+K GY P+T+ AL D +EE K   L  HSE+LAI+F +I
Sbjct: 679 DRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGII 738

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NT  G PI +MKNLR C+DCH A K ISKI GREI VRD++RFHH K+GFCSC D+W
Sbjct: 739 NTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 232/445 (52%), Gaps = 7/445 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L S Y K G+L  AR++F+ M  R  VSW  +I GYSQ  Q  EA  LF +M+ + G  P
Sbjct: 161 LASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN-GIKP 219

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T  +++  C+      +  Q+H   I+ G  S +++ N LV+ Y K   ++ A ++F
Sbjct: 220 NSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLF 279

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + MP +D  S+NA+I G++    + EA+  F  MQ  G KP+  T  + L A   L  + 
Sbjct: 280 ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALE 339

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q+H + +++ F  N  V NAL+++Y+K   V  A KLF  MP+ + V++N +I+ Y+
Sbjct: 340 QGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYS 399

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +    E+L LF E+Q        F   ++L   A+ L L+ G+QIH  TI +   S V 
Sbjct: 400 QHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVV 459

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V   LVD+YAKCG    A+++F  +     V WT MI AY   G+ E+AL LF +M    
Sbjct: 460 VGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG 519

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDA 430
              D   F +IL A +    +  G Q    +    G    +   + L+D+  ++G L +A
Sbjct: 520 TKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEA 579

Query: 431 IQTFKEM---PERNIVSWNALISAC 452
               K M   P+ N+  W AL+ AC
Sbjct: 580 NGIIKNMSLEPDANV--WGALLGAC 602



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 5/357 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N L++ Y K GN+ TA +LF  M  R   SW  +IGGYS  +Q  EA   F  M+
Sbjct: 255 DVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ 314

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+ +T  ++L  C+      +  Q+H   I+ G+ S  ++ N+LV+ Y K   +
Sbjct: 315 VR-GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNV 373

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A ++F+ MP+K+ V++NA+I+G+++ G   EA+ LF+EMQ  G KP  F   + L A 
Sbjct: 374 NSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPAC 433

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+Q+H + +++ F  NV V   L+D+Y+K   V  A+KLF  MPE D VS+ 
Sbjct: 434 AHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWT 493

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  +   +++L LF ++Q T        F+ +L+  ++   +  G Q + Q + +
Sbjct: 494 TMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKS 552

Query: 305 TAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 K+ +   LVD+  + G  +EA  I  N+S       W A++ A     N+E
Sbjct: 553 DYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIE 609


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 289/745 (38%), Positives = 450/745 (60%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI  Y   GN+  AR++F+S+ ++T V+W  LI GY+Q    +EAF LF  M 
Sbjct: 91  NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQM- 149

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G +P  +TF ++L  CS P   N   +VHA ++  G+ S   I  +LV  Y K   +
Sbjct: 150 VDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSM 209

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D AR+VF  +  +D  +FN ++ G+AK G  E+A +LF  MQ +G KP+  +F + L   
Sbjct: 210 DDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +A G+ VHA  +    V+++ VA +L+ +Y+    +  AR++F  M   D VS+ 
Sbjct: 270 WTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWT 329

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VMI  YA N   +++  LF  +Q       +  +  +++  A   +L   R+IH+Q  + 
Sbjct: 330 VMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIA 389

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              +++ V+ +LV MYAKCG  ++A+++F  +     V W+AMI AYV+ G   EA   F
Sbjct: 390 GFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETF 449

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M R+NI  D  T+ ++L A   L +L +G ++++  I++  +S+V  G+AL+ M AK 
Sbjct: 450 HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKH 509

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++ A   F  M  R++++WNA+I   + +G+A+  L  F+ M++  ++P+SV+ + VL
Sbjct: 510 GSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVL 569

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACS  G ++EG ++F  + +   + P  + Y  MVD+L R+G  DEAE L+  MP +P 
Sbjct: 570 SACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPT 629

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +WSS++ +CRIH NL+ A++AA++   ++   D A YV +S++YA AG WE+V++V+K
Sbjct: 630 SSIWSSLLVACRIHGNLDVAERAAERCLMIDPY-DGAVYVQLSHMYAAAGMWENVAKVRK 688

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M  RG+RK    +W+E+  KVH F   D  HP   EI  ++  LM  +K+EGY P T  
Sbjct: 689 VMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQN 748

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD  E+ K E++ YHSE+LAIA+ +++ P G+PI + KNLR C+DCH+A K ISK+TG
Sbjct: 749 VLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTG 808

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI  RD+SRFHHFKDG CSC D+W
Sbjct: 809 REIIARDASRFHHFKDGVCSCGDYW 833



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 269/513 (52%), Gaps = 3/513 (0%)

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           +GG+  D  T+  L   C+E   A    QV   II+ G    +   N+L+  Y     + 
Sbjct: 50  EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR++F  +  K  V++NALI G+A+ G  +EA  LF +M   G +PS  TF + L A  
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             A +  G++VHA VV   FV +  +  AL+ +Y K   + +AR++F  +   D  ++NV
Sbjct: 170 SPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNV 229

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  YA +  ++++ +LF  +Q      ++  F ++L        L  G+ +H Q +   
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            + +++VA SL+ MY  CG  E A+ +F N+     V WT MI  Y + GN+E+A  LF 
Sbjct: 290 LVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFA 349

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M    I  D+ T+  I+ A A  A+L+  +++HS V  +GF +++   +AL+ MYAK G
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCG 409

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           ++KDA Q F  MP R++VSW+A+I A  +NG      ++F  M +S  +PD V+ +++L+
Sbjct: 410 AIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLN 469

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC H G ++ G++ +     K  L        +++ +  + G  + A  +   M    D 
Sbjct: 470 ACGHLGALDVGMEIYTQAI-KADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDV 527

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           I W+++I    +H N   A    D++ K E+ R
Sbjct: 528 ITWNAMIGGYSLHGNAREALYLFDRMLK-ERFR 559


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/740 (38%), Positives = 452/740 (61%), Gaps = 2/740 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +++ Y K G++  ARE+F+ M  ++ VSWTI IGGY+   +   AF++F  M  +G  
Sbjct: 165 NCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEG-V 223

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ +T+ ++L+  S P        VH+ I+  G+ S   +  +LV  Y K       R+
Sbjct: 224 VPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQ 283

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF+++  +D +++N +I G A+ G  EEA +++ +MQ  G  P+  T+   L+A V  A 
Sbjct: 284 VFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAA 343

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+++H+ V K  F  ++ V NAL+ +YS+   + +AR +F +M   D +S+  MI  
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG 403

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A +    E+L +++E+Q    + ++  ++++L+  ++   L+ GR+IH Q +     ++
Sbjct: 404 LAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V N+LV+MY+ CG  ++A+++F  +     V + AMI  Y      +EAL LF  +  
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D+ T+ ++L A A   SL   +++H+ V + GF S+   G+AL+  YAK GS  D
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSD 583

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F++M +RN++SWNA+I   AQ+G  Q  L+ FE M   G +PD V+ +S+LSACSH
Sbjct: 584 ASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSH 643

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YF SM+Q + + P  EHY  MVD+L R+G  DEAE L+  MPF+ +  +W 
Sbjct: 644 AGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWG 703

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CRIH N+  A++AA+   K++ L +A  YVA+S++YA AG W+S ++++K M +R
Sbjct: 704 ALLGACRIHGNVPVAERAAESSLKLD-LDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQR 762

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GV K    SW+++  K+H F A D  HPQ+ +I  +++ L   MK +GY PDT   +HD 
Sbjct: 763 GVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDV 822

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           DE  K  ++ +HSERLAIA+ LI+TP G+ I + KNLR C DCH A K ISKI  REI  
Sbjct: 823 DEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIA 882

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD +RFHHFKDG CSC D+W
Sbjct: 883 RDVNRFHHFKDGVCSCGDYW 902



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/584 (27%), Positives = 309/584 (52%), Gaps = 11/584 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFN--SMVDRTAVSWTILIGGYSQKNQFREAFK 58
           +P+Q TV  N LI+ Y++ G++  AR+++   S ++RT  SW  ++ GY Q     +A K
Sbjct: 55  VPDQYTV--NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALK 112

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           L   M+  G + PD  T  + LS C  P       ++H   ++ G    + + N +++ Y
Sbjct: 113 LLRQMQQHGLA-PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMY 171

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   ++ AR VF +M +K  VS+   I G+A  G +E A ++F +M+  G  P+  T+ 
Sbjct: 172 AKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYI 231

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L+A    A +  G+ VH+ ++      +  V  AL+ +Y+K     + R++F ++   
Sbjct: 232 SVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR 291

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +++N MI   A    ++E+ +++ ++Q      ++  +  LL+   N   L  G++IH
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIH 351

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           ++       S++ V N+L+ MY++CG  ++A+ +F  +     + WTAMI    + G   
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGA 411

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL ++ EM +A +  ++ T+ SIL A +  A+L  G+++H  V+ +G  ++   G+ L+
Sbjct: 412 EALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLV 471

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           +MY+  GS+KDA Q F  M +R+IV++NA+I   A +   +  LK F+ + + G +PD V
Sbjct: 472 NMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 531

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + +++L+AC++ G +E   +  +++ +K           ++V    + G F +A  +  +
Sbjct: 532 TYINMLNACANSGSLEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEK 590

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           M  + + I W+++I     H       + A QLF+  K+    P
Sbjct: 591 MT-KRNVISWNAIIGGSAQHGR----GQDALQLFERMKMEGVKP 629



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 262/544 (48%), Gaps = 61/544 (11%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A+ +   +Q  G + +   +   L   + + D+  GRQVH  +++   V + +  NAL++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 218 LYSKHDCVVEARKLFGEMPEVDGV--SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           +Y +   + EAR+++ ++  ++    S+N M+  Y      +++LKL R++Q       +
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
               + LS   +   L+ GR+IH Q +    + +VKVAN +++MYAKCG  EEA+E+F  
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   S V WT  I  Y   G  E A  +F +M +  +  ++ T+ S+L A +  A+L  G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           K +HS ++ +G  S+   G+AL+ MYAK GS KD  Q F+++  R++++WN +I   A+ 
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC---------------------------- 487
           G  +   + +  M + G  P+ ++ + +L+AC                            
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 488 -------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL---MA 537
                  S CG I++    F+ M +K  +      + +M+  L +SG   EA  +   M 
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVIS-----WTAMIGGLAKSGFGAEALTVYQEMQ 421

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           Q   EP+ + ++S++N+C     LE+ ++   Q+ +     DA     + N+Y++ G  +
Sbjct: 422 QAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVK 481

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
              QV   M +R +        V   + +  + A++        + ++   L   +++EG
Sbjct: 482 DARQVFDRMIQRDI--------VAYNAMIGGYAAHN--------LGKEALKLFDRLQEEG 525

Query: 658 YKPD 661
            KPD
Sbjct: 526 LKPD 529



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 8/196 (4%)

Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           M  K G++ D +Q  ++   + N   +  ++  C +  D  A  +  + ++Q    PD  
Sbjct: 1   MIEKDGAV-DVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQY 59

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           ++ ++++    CG IEE  Q +  ++    +      + +MV    + G  ++A KL+ Q
Sbjct: 60  TVNALINMYIQCGSIEEARQVWKKLSY---MERTVHSWNAMVVGYIQYGYIEKALKLLRQ 116

Query: 539 MP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           M      PD     S ++SC+    LE+ ++   Q  +   L D      + N+YA  G 
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS 176

Query: 596 WESVSQVKKAMRERGV 611
            E   +V   M ++ V
Sbjct: 177 IEEAREVFDKMEKKSV 192


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/745 (37%), Positives = 452/745 (60%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+  YV  G++  AR LF+   +++ VSW ++I GY+ +   +EAF LF  M+
Sbjct: 78  NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ 137

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G  +PD  TF ++LS CS P   N   +VH  +++ G  +   + N+L+  Y K   +
Sbjct: 138 QEG-LEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSV 196

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             ARRVF  M  +D VS+  L   +A+ G  +E++K +  M   G +PS  T+   LSA 
Sbjct: 197 RDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSAC 256

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+Q+HA +V++    +V V+ AL  +Y K   V +AR++F  +P  D +++N
Sbjct: 257 GSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWN 316

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI     + Q +E+  +F  +        +  +  +LS  A    L  G++IH + +  
Sbjct: 317 TMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD 376

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             +S+V+  N+L++MY+K G  ++A+++F  +     V WTA++  Y   G + E+ + F
Sbjct: 377 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTF 436

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M +  + A++ T+  +L+A +   +L  GK++H+ V+++G  +++   +AL+ MY K 
Sbjct: 437 KKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKC 496

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++DAI+  + M  R++V+WN LI   AQNG     L+ FE M     +P++ + ++V+
Sbjct: 497 GSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVM 556

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SAC    L+EEG + F SM + Y + P ++HYA MVDIL R+G   EAE ++  MPF+P 
Sbjct: 557 SACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPS 616

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             MW +++ +CR H N+E  ++AA+Q  K+E  ++A  YV++S IYA AG W  V++++K
Sbjct: 617 AAMWGALLAACRAHGNVEIGEQAAEQCLKLEP-QNAGTYVSLSFIYAAAGMWRDVAKLRK 675

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M+ERGV+K    SW+E+  +VH F A D+ HP+T EI  ++E L +++K  GY PDT  
Sbjct: 676 LMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRF 735

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            +HD D+E K  ++ +HSE+LAIA+ LI+TP  +PI V KNLR CTDCH A K ISKITG
Sbjct: 736 VMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITG 795

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI  RD+ RFHHFK+G CSC D+W
Sbjct: 796 REIIARDAHRFHHFKNGECSCGDYW 820


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/745 (37%), Positives = 450/745 (60%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   TN L+  Y   G++  AR+LF+   +++ VSW ++I GY+ +   +EAF LF  M+
Sbjct: 62  NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQ 121

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +   +PD  TF ++LS CS P   N   ++H  +++ G  +   + N+L+  Y K   +
Sbjct: 122 QER-LEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSV 180

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             ARRVF  M  +D VS+  L   +A+ G  EE++K +  M     +PS  T+   LSA 
Sbjct: 181 RDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSAC 240

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+Q+HA +V++ +  +V V+ AL  +Y K     +AR++F  +   D +++N
Sbjct: 241 GSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWN 300

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  +  + Q +E+   F  +        +  ++T+LS  A    L  G++IH +    
Sbjct: 301 TMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD 360

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             +S+V+  N+L++MY+K G  ++A+++F  +     V WT ++  Y     + E+   F
Sbjct: 361 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M +  + A++ T+  +L+A +   +L  GK++H+ V+++G ++++   +AL+ MY K 
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKC 480

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++DAI+ F+ M  R++V+WN LI    QNG     L+ +E M   G +P++ + ++VL
Sbjct: 481 GSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVL 540

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SAC  C L+EEG + F  M++ Y + P ++HYA MVDIL R+G   EAE ++  +P +P 
Sbjct: 541 SACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPS 600

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             MW +++ +CRIH N+E  ++AA+   K+E  ++A  YV++S IYA AG W  V++++K
Sbjct: 601 AAMWGALLAACRIHCNVEIGERAAEHCLKLEP-QNAGLYVSLSAIYAAAGMWRDVAKLRK 659

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M+ERGV+K    SW+E+  +VH F A D+ HP+T EI  ++E L ++MK  GY PDT  
Sbjct: 660 FMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRF 719

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            +HD D+E K  ++ +HSE+LAIA+ LI+TP G+PI + KNLR CTDCH A K ISKIT 
Sbjct: 720 VMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITK 779

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI  RD+ RFHHFK+G CSC D+W
Sbjct: 780 REIIARDAHRFHHFKNGECSCGDYW 804



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 283/577 (49%), Gaps = 50/577 (8%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   D   +  LL  C +        QVH  I++ G    + I N+L+  Y     ++ A
Sbjct: 23  GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA 82

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R++F +   K  VS+N +I+G+A  GL +EA  LF  MQ    +P  FTF + LSA    
Sbjct: 83  RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           A +  GR++H  V++     +  V NAL+ +Y+K   V +AR++F  M   D VS+  + 
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA +   +ESLK +  +   R   S+  +  +LS   +   L+ G+QIH   + +   
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+V+V+ +L  MY KCG F++A+E+F  LS+   + W  MI  +V  G LEEA   F  M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               ++ D+AT+ ++L A A    L+ GK++H+   + G +S+V  G+AL++MY+K+GS+
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSM 382

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           KDA Q F  MP+R++VSW  L+   A       +  +F+ M+Q G + + ++ + VL AC
Sbjct: 383 KDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC 442

Query: 488 SH-----------------------------------CGLIEEGLQYFNSMTQKYKLRPK 512
           S+                                   CG +E+ ++ F  M+ +  +   
Sbjct: 443 SNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVT-- 500

Query: 513 KEHYASMVDILCRSGCFDEA---EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
              + +++  L ++G   EA    ++M      P+   + +V+++CR+   +E  ++   
Sbjct: 501 ---WNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR--- 554

Query: 570 QLFKMEKLRDAAP----YVAMSNIYAVAGQWESVSQV 602
           Q   M K     P    Y  M +I A AG       V
Sbjct: 555 QFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDV 591



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 59/331 (17%)

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R     D   +  +L++  +   L++GKQ+H  ++R G   NV+  + LL +YA  GS+ 
Sbjct: 21  RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A Q F +   +++VSWN +IS  A  G AQ     F  M Q   +PD  + +S+LSACS
Sbjct: 81  EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140

Query: 489 -----------------------------------HCGLIEEGLQYFNSMTQKYKLRPKK 513
                                               CG + +  + F++M  + ++    
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS--- 197

Query: 514 EHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
             + ++      SG  +E+ K    M Q    P  I + +V+++C     LE  K+    
Sbjct: 198 --WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAH 255

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           + + E   D     A++ +Y   G ++   +V + +  R V        +   + +  F 
Sbjct: 256 IVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDV--------IAWNTMIRGFV 307

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + +L        R +E        EG  PD
Sbjct: 308 DSGQLEEAHGTFHRMLE--------EGVAPD 330


>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 491

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/491 (55%), Positives = 363/491 (73%), Gaps = 1/491 (0%)

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L+LFRE+Q   FDR   PF++LLSV     D++IGRQIH Q I+     E  + N+L+D
Sbjct: 2   ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY+KCG  + AK IFAN S  + + WTA+I+  VQ G  EEAL LF  M RA +S D+AT
Sbjct: 62  MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
            +SI+++S+ L  + +G+QLH+++  SG MS+VFSGSALLDMYAK G L +AI+TF EMP
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           E+N ++WNA+ISA AQ G A+  ++ F+ M+  G+ PD V+ LSVL+ACSH GL EE ++
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMK 241

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           YF+ M     + P KEHY+ ++D L R+GCFD+ +K++ +MPFE D ++WSS+++SCRI+
Sbjct: 242 YFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIY 301

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            N + A  AA+ LF M    DA  YV +SNIYA AG WE  ++VKK MR+RGVRK +  S
Sbjct: 302 GNQDLATVAAENLFTMVP-TDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNS 360

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
           WVE+K K+++F++ND  +P  +EI+ ++E L +EM K+GY+PDTSCALH  D + K+ESL
Sbjct: 361 WVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESL 420

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
           KYHSERLAIAFALINTP G+PI VMKNL AC DCHAAIK+ISKI  R+I VRDS RFHHF
Sbjct: 421 KYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIIVRDSRRFHHF 480

Query: 739 KDGFCSCRDFW 749
           KDGFCSC D+W
Sbjct: 481 KDGFCSCGDYW 491



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 211/480 (43%), Gaps = 51/480 (10%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A++LF EMQ L F      FA+ LS    L DI +GRQ+HA ++        F+ NAL+D
Sbjct: 2   ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   +  A+ +F    +   +S+  +IT    N Q++E+L+LF  ++       +  
Sbjct: 62  MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            S+++   ++   + IGRQ+H     +  +S V   ++L+DMYAKCG  +EA   F  + 
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             +++ W A+ISAY Q G  + A+ +F  M       D  TF S+L A +      L ++
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNG---LAEE 238

Query: 398 LHSFVIRSGFMSNVFSG----SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
              +     + +++       S ++D   ++G      +   EMP E + V W++++ +C
Sbjct: 239 CMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSC 298

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS-----------------ACSHCGLIEE 495
              G+      + E++      P   +   +LS                      G+ +E
Sbjct: 299 RIYGNQDLATVAAENLFT--MVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKE 356

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVI 552
               +  + QK  +    +H   M+D +      +E E+L  +M    +EPD        
Sbjct: 357 SGNSWVEIKQKIYMFSSNDHTNPMIDEI-----KEELERLYEEMDKQGYEPD-------- 403

Query: 553 NSCRIH-----KNLEFAKKAADQL---FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            SC +H     + LE  K  +++L   F +       P   M N+ A      ++  + K
Sbjct: 404 TSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISK 463



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 211/454 (46%), Gaps = 69/454 (15%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
           A +LF +M+T    D   + FA+LLS            Q+HA +I  G      + N+L+
Sbjct: 2   ALQLFREMQT-LSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALI 60

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
           D Y K   LD A+ +F     K ++S+ ALITG  + G +EEA++LF  M+  G  P   
Sbjct: 61  DMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRA 120

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T ++ + +   L  I +GRQ+HA++  +  + +VF  +ALLD+Y+K  C+ EA + F EM
Sbjct: 121 TCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEM 180

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           PE + +++N +I+ YA   Q K ++++F  +    F      F ++L+  ++        
Sbjct: 181 PEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSH-------- 232

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW----TAMISAY 351
                             N L +   +C ++ +    + ++S     PW    + +I A 
Sbjct: 233 ------------------NGLAE---ECMKYFDLMRYYNSMS-----PWKEHYSCVIDAL 266

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRA-----SAELASLSLGKQLHSFVIRSG 406
            + G  ++   +  EM      AD   ++SIL +     + +LA+++  + L + V    
Sbjct: 267 GRAGCFDKIQKVLDEM---PFEADPVIWSSILHSCRIYGNQDLATVA-AENLFTMVPTDA 322

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV-----SWNAL---ISACAQNGDA 458
               + S     ++YAK+G+ + A +  K M +R +      SW  +   I   + N   
Sbjct: 323 TAYVILS-----NIYAKAGNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHT 377

Query: 459 QATL--------KSFEDMVQSGYQPDSVSLLSVL 484
              +        + +E+M + GY+PD+   L ++
Sbjct: 378 NPMIDEIKEELERLYEEMDKQGYEPDTSCALHMV 411



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 10/252 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  A+ +F +  D+TA+SWT LI G  Q  Q  EA +LF +MR  G S
Sbjct: 57  NALIDMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLS 116

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T ++++   S         Q+HA +   G+ S +   ++L+D Y K  CLD A R
Sbjct: 117 -PDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIR 175

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV--GL 187
            F EMP+K+S+++NA+I+ +A+ G  + AI++F  M H GF P   TF + L+A    GL
Sbjct: 176 TFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGL 235

Query: 188 ADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSY- 243
           A+  +     +  +   + + E+    + ++D   +  C  + +K+  EMP E D V + 
Sbjct: 236 AEECMKYFDLMRYYNSMSPWKEHY---SCVIDALGRAGCFDKIQKVLDEMPFEADPVIWS 292

Query: 244 NVMITCYAWNEQ 255
           +++ +C  +  Q
Sbjct: 293 SILHSCRIYGNQ 304



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 7/143 (4%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S + L+  Y K G L  A   FN M ++ +++W  +I  Y+Q  Q + A ++F D     
Sbjct: 156 SGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMF-DSMLHC 214

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII---CNSLVDSYCKIRCL 124
           G  PD VTF ++L+ CS    A E ++ + D++++ YNS+       + ++D+  +  C 
Sbjct: 215 GFCPDPVTFLSVLAACSHNGLAEECMK-YFDLMRY-YNSMSPWKEHYSCVIDALGRAGCF 272

Query: 125 DLARRVFKEMP-QKDSVSFNALI 146
           D  ++V  EMP + D V +++++
Sbjct: 273 DKIQKVLDEMPFEADPVIWSSIL 295


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/741 (39%), Positives = 452/741 (60%), Gaps = 2/741 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K      ++ LF+ + +R  VSW  L   Y Q +   EA  LF +M   G 
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSG- 253

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  + +++++ C+    ++    +H  +IK GY+      N+LVD Y K+  L  A 
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF+++ Q D VS+NA+I G      +E+A++L  +M+  G  P+ FT ++AL A  G+ 
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMG 373

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              LGRQ+H+ ++K +   ++FV+  L+D+YSK D + +AR  F  +PE D +++N +I+
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y+   +  E+L LF E+       +Q   ST+L   A    + + RQ+H  ++ +   S
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 493

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ V NSL+D Y KC   E+A+ IF   +    V +T+MI+AY Q G  EEAL LF+EM 
Sbjct: 494 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 553

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D+   +S+L A A L++   GKQLH  +++ GF+ ++F+G++L++MYAK GS+ 
Sbjct: 554 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 613

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F E+ ER IVSW+A+I   AQ+G  +  L+ F  M++ G  P+ ++L+SVL AC+
Sbjct: 614 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN 673

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ E   YF SM + +  +P +EHYA M+D+L R+G  +EA +L+ +MPFE +  +W
Sbjct: 674 HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVW 733

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ + RIHK++E  ++AA+ LF +E    +  +V ++NIYA AG+WE+V++V++ MR+
Sbjct: 734 GALLGAARIHKDVELGRRAAEMLFILEP-EKSGTHVLLANIYASAGKWENVAEVRRLMRD 792

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
             V+K    SW+E+K KV+ F   D  H ++ EI  K++ L   M K GY P     LHD
Sbjct: 793 SKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHD 852

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            ++  K   L +HSE+LA+AF LI TP+G+PI V KNLR C DCH A K I KI  REI 
Sbjct: 853 VEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREII 912

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD +RFHHFKDG CSC D+W
Sbjct: 913 VRDINRFHHFKDGSCSCGDYW 933



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 169/564 (29%), Positives = 306/564 (54%), Gaps = 3/564 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K  N   AR+L +   +   VSW+ LI GY+Q      A   F +M   G  
Sbjct: 95  NHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ TF+++L  CS         QVH  ++  G+   + + N+LV  Y K      ++R
Sbjct: 155 CNEF-TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKR 213

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E+P+++ VS+NAL + + +     EA+ LF EM   G KP++F+ ++ ++A  GL D
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + G+ +H +++K  +  + F ANAL+D+Y+K   + +A  +F ++ + D VS+N +I  
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              +E ++++L+L  +++ +    + F  S+ L   A     ++GRQ+H+  +     S+
Sbjct: 334 CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESD 393

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+  LVDMY+KC   E+A+  F  L     + W A+IS Y Q     EAL+LF+EM +
Sbjct: 394 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 453

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  +Q T ++IL+++A L  + + +Q+H   ++SGF S+++  ++L+D Y K   ++D
Sbjct: 454 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 513

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+E    ++VS+ ++I+A AQ G  +  LK F +M     +PD     S+L+AC++
Sbjct: 514 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 573

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
               E+G Q  +    KY          S+V++  + G  D+A +  +++  E   + WS
Sbjct: 574 LSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWS 631

Query: 550 SVINSCRIHKNLEFAKKAADQLFK 573
           ++I     H +   A +  +Q+ K
Sbjct: 632 AMIGGLAQHGHGRQALQLFNQMLK 655



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 184/633 (29%), Positives = 307/633 (48%), Gaps = 59/633 (9%)

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   P  V+++ LLS C    +    +Q+HA I K G +    I N L++ Y K R    
Sbjct: 50  GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGY 109

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++  E  + D VS++ALI+G+A+ GL   A+  F EM  LG K ++FTF++ L A   
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           + D+ +G+QVH  VV + F  +VFVAN L+ +Y+K D  +++++LF E+PE + VS+N +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +CY   +   E++ LF E+  +    ++F  S++++      D   G+ IH   I    
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +   AN+LVDMYAK G   +A  +F  +     V W A+I+  V   + E+AL L  +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R+ I  +  T +S L+A A +    LG+QLHS +++    S++F    L+DMY+K   
Sbjct: 350 MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL 409

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM------------------ 468
           L+DA   F  +PE+++++WNA+IS  +Q  +    L  F +M                  
Sbjct: 410 LEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 469

Query: 469 -----------------VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
                            V+SG+  D   + S++ +   C  +E+  + F   T    +  
Sbjct: 470 TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS- 528

Query: 512 KKEHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
               + SM+    + G  +EA KL   M  M  +PD  + SS++N+C      E  K+  
Sbjct: 529 ----FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH 584

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
             + K   + D     ++ N+YA  G  +   +    + ERG+      SW  +   +  
Sbjct: 585 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI-----VSWSAMIGGL-- 637

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                    Q    R+ ++ L  +M KEG  P+
Sbjct: 638 --------AQHGHGRQALQ-LFNQMLKEGVSPN 661



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 235/464 (50%), Gaps = 3/464 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +  S N L+  Y K G+LA A  +F  +     VSW  +I G        +A +L   M+
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   P+  T ++ L  C+         Q+H+ ++K    S L +   LVD Y K   L
Sbjct: 352 RSGIC-PNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR  F  +P+KD +++NA+I+G+++   + EA+ LFVEM   G   +  T +  L + 
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GL  + + RQVH   VK+ F  +++V N+L+D Y K   V +A ++F E    D VS+ 
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT YA   Q +E+LKLF E+Q       +F  S+LL+  AN    + G+Q+H   +  
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 590

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + ++   NSLV+MYAKCG  ++A   F+ L+    V W+AMI    Q G+  +AL LF
Sbjct: 591 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLF 650

Query: 365 IEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAK 423
            +M +  +S +  T  S+L A      ++  K    S     GF       + ++D+  +
Sbjct: 651 NQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGR 710

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFE 466
           +G + +A++   +MP E N   W AL+ A   + D +   ++ E
Sbjct: 711 AGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 754



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
           F+ A ++   +   S  P T  I   + KGN                +    +++ +L  
Sbjct: 21  FKPAPKLIQTVPQFSQDPQTTAILNLIDKGNF---------------TPTSVSYSKLLSQ 65

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
                SL  G Q+H+ + +SG   +    + L+++Y+K  +   A +   E  E ++VSW
Sbjct: 66  CCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSW 125

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +ALIS  AQNG     L +F +M   G + +  +  SVL ACS
Sbjct: 126 SALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/741 (39%), Positives = 450/741 (60%), Gaps = 2/741 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K G L  +R LF  +V+R  VSW  L   Y Q     EA  LF +M    G
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEM-VRSG 178

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  + + +L+ C+     +   ++H  ++K G +      N+LVD Y K   ++ A 
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF+++   D VS+NA+I G      N+ A+ L  EM+  G +P+ FT ++AL A   + 
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              LGRQ+H+ ++K +   ++F A  L+D+YSK + + +AR+ +  MP+ D +++N +I+
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y+    + +++ LF ++     D +Q   ST+L  VA+   +++ +QIHT +I +   S
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYS 418

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V NSL+D Y KC   +EA +IF   +    V +T+MI+AY Q G+ EEAL L+++M 
Sbjct: 419 DFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQ 478

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            A+I  D    +S+L A A L++   GKQLH   I+ GFM ++F+ ++L++MYAK GS++
Sbjct: 479 DADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIE 538

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F E+P R IVSW+A+I   AQ+G  +  L+ F  M++ G  P+ ++L+SVL AC+
Sbjct: 539 DADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACN 598

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ EG QYF  M   + ++P +EHYA M+D+L RSG  +EA +L+  +PFE D  +W
Sbjct: 599 HAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVW 658

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ + RIHKN+E  +KAA  LF +E  + +  +V ++NIYA AG WE+V++V+K M++
Sbjct: 659 GALLGAARIHKNIELGQKAAKMLFDLEPEK-SGTHVLLANIYASAGMWENVAKVRKFMKD 717

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
             V+K    SW+E+K KV+ F   D  H +++EI  K++ L   + K GY       +H+
Sbjct: 718 SKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHN 777

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            D+  K + L +HSE+LA+AF LI TP G PI V KNLR C DCH   K + KI  REI 
Sbjct: 778 VDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREII 837

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD +RFHHFKDG CSC D+W
Sbjct: 838 VRDINRFHHFKDGSCSCGDYW 858



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 303/573 (52%), Gaps = 8/573 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K      AR+L +   +   VSW+ L+ GY Q     EA  +F +M   G  
Sbjct: 20  NHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVK 79

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ TF ++L  CS     N   +VH   +  G+ S   + N+LV  Y K   LD +RR
Sbjct: 80  CNEF-TFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRR 138

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  + +++ VS+NAL + + +  L  EA+ LF EM   G  P++F+ +  L+A  GL +
Sbjct: 139 LFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQE 198

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LGR++H  ++K     + F ANAL+D+YSK   +  A  +F ++   D VS+N +I  
Sbjct: 199 GDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAG 258

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              ++    +L L  E++ +    + F  S+ L   A     ++GRQ+H+  I   A S+
Sbjct: 259 CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSD 318

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +  A  LVDMY+KC   ++A+  + ++     + W A+IS Y Q G+  +A++LF +M  
Sbjct: 319 LFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFS 378

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +I  +Q T +++L++ A L ++ + KQ+H+  I+SG  S+ +  ++LLD Y K   + +
Sbjct: 379 EDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDE 438

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+E    ++V++ ++I+A +Q GD +  LK +  M  +  +PD     S+L+AC++
Sbjct: 439 ASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACAN 498

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
               E+G Q  +    K+          S+V++  + G  ++A++  +++P     + WS
Sbjct: 499 LSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP-NRGIVSWS 556

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           ++I     H +     K A +LF  + LRD  P
Sbjct: 557 AMIGGYAQHGH----GKEALRLFN-QMLRDGVP 584



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 277/557 (49%), Gaps = 43/557 (7%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +++HA +IKFG++    + N LV  Y K R    AR++  E  + D VS+++L++G+ + 
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G  EEA+ +F EM  LG K ++FTF + L A     D+ +GR+VH   V T F  + FVA
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N L+ +Y+K   + ++R+LFG + E + VS+N + +CY  +E   E++ LF+E+  +   
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F  S +L+  A   +  +GR+IH   +      +   AN+LVDMY+K G  E A  +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F +++H   V W A+I+  V     + AL L  EM  +    +  T +S L+A A +   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG+QLHS +I+    S++F+   L+DMY+K   + DA + +  MP+++I++WNALIS  
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 453 AQNGDAQATLKSFEDM-----------------------------------VQSGYQPDS 477
           +Q GD    +  F  M                                   ++SG   D 
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
             + S+L     C  I+E  + F   T +  +      Y SM+    + G  +EA KL  
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVA-----YTSMITAYSQYGDGEEALKLYL 475

Query: 538 QM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           QM     +PD  + SS++N+C      E  K+      K   + D     ++ N+YA  G
Sbjct: 476 QMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCG 535

Query: 595 QWESVSQVKKAMRERGV 611
             E   +    +  RG+
Sbjct: 536 SIEDADRAFSEIPNRGI 552



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 226/446 (50%), Gaps = 3/446 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S N L+  Y K+G +  A  +F  +     VSW  +I G    +    A  L  +M+   
Sbjct: 220 SANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGS- 278

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+ P+  T ++ L  C+         Q+H+ +IK   +S L     LVD Y K   +D A
Sbjct: 279 GTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDA 338

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RR +  MP+KD +++NALI+G+++ G + +A+ LF +M       +  T +  L +   L
Sbjct: 339 RRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL 398

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             I + +Q+H   +K+    + +V N+LLD Y K + + EA K+F E    D V+Y  MI
Sbjct: 399 QAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMI 458

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T Y+     +E+LKL+ ++Q        F  S+LL+  AN    + G+Q+H   I    +
Sbjct: 459 TAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFM 518

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++  +NSLV+MYAKCG  E+A   F+ + +   V W+AMI  Y Q G+ +EAL LF +M
Sbjct: 519 CDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQM 578

Query: 368 CRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            R  +  +  T  S+L A      ++ GKQ      +  G        + ++D+  +SG 
Sbjct: 579 LRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGK 638

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISA 451
           L +A++    +P E +   W AL+ A
Sbjct: 639 LNEAVELVNSIPFEADGFVWGALLGA 664


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/744 (37%), Positives = 450/744 (60%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L++ Y + GNL  A ++F+ M  R  +S+  LI G +Q+     A +LF  M+ 
Sbjct: 248 TFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQL 307

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D    PD VT A+LLS C+      +  Q+H+ +IK G +S LII  SL+D Y K   ++
Sbjct: 308 DC-MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A   F     ++ V +N ++  + + G   E+  +F++MQ  G  P+ +T+ + L    
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L  + LG Q+H  V+K+ F  NV+V + L+D+Y+KH  +  AR +   + E D VS+  
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTA 486

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  ++ + E+LKLF+E++          FS+ +S  A    L  G+QIH Q+ ++ 
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              ++ + N+LV +YA+CGR ++A   F  +     + W A+IS + Q G+ EEAL +F 
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A + A+  TF S + A+A  A++  GKQ+H+ +I++G+ S   + + L+ +Y+K G
Sbjct: 607 QMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCG 666

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA + F EMPE+N+VSWNA+I+  +Q+G     +  FE+M Q G  P+ V+ + VLS
Sbjct: 667 SIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLS 726

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+ EGL YF SM++++ L PK EHY  +VD+L R+     A + + +MP EPD 
Sbjct: 727 ACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDA 786

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C +HKN+E  + AA  L ++E   D+A YV +SN+YAV+G+W+   + ++ 
Sbjct: 787 MIWRTLLSACTVHKNIEIGEFAARHLLELEP-EDSATYVLLSNMYAVSGKWDYRDRTRQM 845

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RGV+K    SW+E+K+ +H F   D LHP   +I   I++L +   + GY  D    
Sbjct: 846 MKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNL 905

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L+D ++E K  +   HSE+LA+AF L++     PI V+KNLR C DCH  IK +SKI+ R
Sbjct: 906 LNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNR 965

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRD+ RFHHF+ G CSC+D+W
Sbjct: 966 AIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/488 (34%), Positives = 261/488 (53%), Gaps = 2/488 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y+  G +  A +LF+ +       W  +I G   K    +   LF  M T+  + P
Sbjct: 51  LIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVT-P 109

Query: 72  DYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           D  TFA++L  CS      ++  Q+HA II  G+ S  ++CN L+D Y K   +DLA+ V
Sbjct: 110 DESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLV 169

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F+ +  KDSVS+ A+I+G ++ G  +EAI LF +M      P+ + F++ LSA   +   
Sbjct: 170 FERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELF 229

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG Q+H F+VK       FV NAL+ LYS+   ++ A ++F +M   D +SYN +I+  
Sbjct: 230 KLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGL 289

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A       +L+LF ++Q           ++LLS  A+      G+Q+H+  I     S++
Sbjct: 290 AQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDL 349

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            +  SL+D+Y KC   E A E F      + V W  M+ AY Q GNL E+  +F++M   
Sbjct: 350 IIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIE 409

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  +Q T+ SILR    L +L LG+Q+H+ VI+SGF  NV+  S L+DMYAK G L  A
Sbjct: 410 GLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTA 469

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
               + + E ++VSW A+I+   Q+      LK F++M   G + D++   S +SAC+  
Sbjct: 470 RGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGI 529

Query: 491 GLIEEGLQ 498
             + +G Q
Sbjct: 530 QALNQGQQ 537



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 173/549 (31%), Positives = 295/549 (53%), Gaps = 3/549 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K+G++  A+ +F  +  + +VSW  +I G SQ  +  EA  LF  M      
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              YV F+++LS C++ +      Q+H  I+K+G +S   +CN+LV  Y +   L  A +
Sbjct: 211 PTPYV-FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M ++D +S+N+LI+G A+ G ++ A++LF +MQ    KP   T A+ LSA   +  
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              G+Q+H++V+K     ++ +  +LLDLY K   +  A + F      + V +NVM+  
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y       ES  +F ++Q      +Q+ + ++L    +   L +G QIHTQ I +     
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V + L+DMYAK G  + A+ I   L     V WTAMI+ Y Q     EAL LF EM  
Sbjct: 450 VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN 509

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I +D   F+S + A A + +L+ G+Q+H+    SG+  ++  G+AL+ +YA+ G  +D
Sbjct: 510 QGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQD 569

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+++  ++ +SWNALIS  AQ+G  +  L+ F  M Q+G + +  +  S +SA ++
Sbjct: 570 AYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATAN 629

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I++G Q  ++M  K     + E    ++ +  + G  ++A++   +MP E + + W+
Sbjct: 630 TANIKQGKQ-IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWN 687

Query: 550 SVINSCRIH 558
           ++I     H
Sbjct: 688 AMITGYSQH 696



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 239/479 (49%), Gaps = 3/479 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T+  L  GC    +  +  ++HA I K G++   ++ + L+D Y     +D A ++F ++
Sbjct: 12  TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLADIALG 193
           P  +   +N +I+G   + L  + + LF  M      P + TFA+ L A   G A   + 
Sbjct: 72  PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+HA ++   F  +  V N L+DLYSK+  V  A+ +F  +   D VS+  MI+  + N
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            +  E++ LF ++  +    + + FS++LS        ++G Q+H   +     SE  V 
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+LV +Y++ G    A++IF+ +     + + ++IS   Q+G  + AL LF +M    + 
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T AS+L A A + +   GKQLHS+VI+ G  S++    +LLD+Y K   ++ A + 
Sbjct: 312 PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F      N+V WN ++ A  Q G+   +   F  M   G  P+  +  S+L  C+  G +
Sbjct: 372 FLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGAL 431

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + G Q  ++   K   +      + ++D+  + G  D A  ++ ++  E D + W+++I
Sbjct: 432 DLGEQ-IHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMI 488



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 254/550 (46%), Gaps = 70/550 (12%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +++HA + K+ F     + + L+D+Y  H  V  A KLF ++P  +   +N +I+     
Sbjct: 30  KKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89

Query: 254 EQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
           +   + L LF  +  +    D S F  S L +    K   Q+  QIH + I     S   
Sbjct: 90  KLASQVLGLFSLMITENVTPDESTFA-SVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPL 148

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V N L+D+Y+K G  + AK +F  L    +V W AMIS   Q G  +EA+ LF +M ++ 
Sbjct: 149 VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +      F+S+L A  ++    LG+QLH F+++ G  S  F  +AL+ +Y++ G+L  A 
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE 268

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F +M  R+ +S+N+LIS  AQ G +   L+ FE M     +PD V++ S+LSAC+  G
Sbjct: 269 QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD--------------------- 530
              +G Q  +S   K  +        S++D+  +  CFD                     
Sbjct: 329 AGYKGKQ-LHSYVIKMGMSSDLIIEGSLLDLYVK--CFDIETAHEYFLTTETENVVLWNV 385

Query: 531 ------------EAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
                       E+  +  QM  E   P++  + S++ +C     L+  ++   Q+ K  
Sbjct: 386 MLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSG 445

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              +      + ++YA  G+ ++   + + +RE  V      SW  +   +  +T +D  
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDV-----VSWTAM---IAGYTQHD-- 495

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPD--------TSCA---LHDEDEEIKVES-LKYHSE 683
                 +  +   L QEM+ +G + D        ++CA     ++ ++I  +S +  +SE
Sbjct: 496 ------LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549

Query: 684 RLAIAFALIN 693
            L+I  AL++
Sbjct: 550 DLSIGNALVS 559



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 15/191 (7%)

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I A+  T+  +        SL   K+LH+ + +SGF      GS L+D+Y   G + +A
Sbjct: 5   GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           I+ F ++P  N+  WN +IS       A   L  F  M+     PD  +  SVL ACS  
Sbjct: 65  IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS-- 122

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYAS-------MVDILCRSGCFDEAEKLMAQMPFEP 543
                G +    +T++   +     + S       ++D+  ++G  D A KL+ +  F  
Sbjct: 123 -----GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLA-KLVFERLFLK 176

Query: 544 DEIMWSSVINS 554
           D + W ++I+ 
Sbjct: 177 DSVSWVAMISG 187


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/741 (38%), Positives = 451/741 (60%), Gaps = 2/741 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K G    AR LF+++ DR+ VSW  L   Y   +   EA  LF DM   G 
Sbjct: 48  ANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSG- 106

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  + +++++ C+  + + +  ++H  +IK GY+S     N+LVD Y K+  L+ A 
Sbjct: 107 IRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS 166

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF E+ + D VS+NA+I G      +  A++L  EM   G  P+ FT ++AL A  G+A
Sbjct: 167 SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMA 226

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              LGRQ+H+ ++K +   + F+   L+D+YSK + + +AR +F  MPE D +++N +I+
Sbjct: 227 LRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVIS 286

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            ++ NE+ +E+  LF  +       +Q   ST+L  +A      + RQIH  ++ +    
Sbjct: 287 GHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF 346

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V NSL+D Y KCG  E+A  +F     +  V +T++++AY Q G  EEAL L++EM 
Sbjct: 347 DNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQ 406

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              I  D    +S+L A A L++   GKQ+H  +++ GFMS++F+G++L++MYAK GS++
Sbjct: 407 DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIE 466

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F  +P R IVSW+A+I   AQ+G  +  L+ F+ M++ G  P+ ++L+SVL AC+
Sbjct: 467 DASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACN 526

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ E   YFNSM   + + P +EHYA M+D+L R+G  + A +L+ +MPF+ + ++W
Sbjct: 527 HAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVW 586

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ + RIHKN++  ++AA+ L  +E    +  +V ++NIYA  G W+ V++V++ M++
Sbjct: 587 GALLGAARIHKNIDLGEQAAEMLLALEP-EKSGTHVLLANIYASVGMWDKVARVRRLMKD 645

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
             V+K    SW+E+K KV+ F   D  H ++ EI  K++ L   +KK GY P     LHD
Sbjct: 646 GKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHD 705

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +   K + L +HSE+LA+AF LI TP G+PI V KNLR C DCH  +K ISKI  REI 
Sbjct: 706 VERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREII 765

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD++RFHHF++G CSC ++W
Sbjct: 766 VRDTNRFHHFREGSCSCGEYW 786



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 270/508 (53%), Gaps = 7/508 (1%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            F ++L  C+         QVH  ++  G++S   + NSLV  Y K      AR +F  +
Sbjct: 12  AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P +  VS+NAL + +    ++ EA+ LF +M   G +P++F+ ++ ++   GL D   GR
Sbjct: 72  PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H +++K  +  + F ANAL+D+Y+K   + +A  +F E+ + D VS+N +I     +E
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            +  +L+L RE+  +    + F  S+ L   A     ++GRQ+H+  I     S+  +  
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGV 251

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+DMY+KC   ++A+ +F  +     + W A+IS + Q    EEA +LF  M    I  
Sbjct: 252 GLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGF 311

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +Q T +++L++ A L +  + +Q+H+  ++SGF  + +  ++L+D Y K G ++DA + F
Sbjct: 312 NQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVF 371

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           +E P  ++V + +L++A AQ+G  +  L+ + +M   G +PDS    S+L+AC+     E
Sbjct: 372 EESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYE 431

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +G Q  +    K+          S+V++  + G  ++A    +++P     + WS++I  
Sbjct: 432 QGKQ-VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIGG 489

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAP 582
              H    + K+A  QLFK + L+   P
Sbjct: 490 LAQHG---YGKEAL-QLFK-QMLKVGVP 512



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 235/480 (48%), Gaps = 33/480 (6%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M  LG K ++F F + L A     D+ LG+QVH  VV T F  + FVAN+L+ LY+K   
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
             +AR LF  +P+   VS+N + +CY  ++ + E++ LF ++  +    ++F  S++++V
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                D   GR+IH   I     S+   AN+LVDMYAK G  E+A  +F  ++    V W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            A+I+  V       AL L  EM ++ +  +  T +S L+A A +A   LG+QLHS +I+
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
               S+ F G  L+DMY+K  S+ DA   FK MPER++++WNA+IS  +QN + +     
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY----FNSMTQKYKL 509
           F  M   G   +  +L +VL + +           H   ++ G ++     NS+   Y  
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 510 RPKKEH---------------YASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSV 551
               E                + S+V    + G  +EA +L  +M     +PD  + SS+
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +N+C      E  K+    + K   + D     ++ N+YA  G  E  S     +  RG+
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGI 480



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 226/451 (50%), Gaps = 3/451 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + +  S N L+  Y K G L  A  +F+ +     VSW  +I G         A +L  +
Sbjct: 143 DSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLRE 202

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M   G   P+  T ++ L  C+         Q+H+ +IK    S   +   L+D Y K  
Sbjct: 203 MNKSGMC-PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCN 261

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR VFK MP++D +++NA+I+G ++   +EEA  LF  M   G   +  T +  L 
Sbjct: 262 SMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLK 321

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L    + RQ+HA  +K+ F  + +V N+L+D Y K   V +A ++F E P VD V 
Sbjct: 322 SIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVL 381

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  ++T YA + Q +E+L+L+ E+Q        F  S+LL+  A+    + G+Q+H   +
Sbjct: 382 FTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHIL 441

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +S++   NSLV+MYAKCG  E+A   F+ +     V W+AMI    Q G  +EAL 
Sbjct: 442 KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQ 501

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF +M +  +  +  T  S+L A      ++  K   +S  I  G        + ++D+ 
Sbjct: 502 LFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLL 561

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
            ++G L+ A++   +MP + N + W AL+ A
Sbjct: 562 GRAGKLEAAMELVNKMPFQANALVWGALLGA 592


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/742 (38%), Positives = 441/742 (59%), Gaps = 5/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y KSG++  AR +F+ MV+R   SWT++IGG +Q  + +EAF LF+ M   GG 
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMER-GGC 228

Query: 70  DPDYVTFATLLSGCSEPDT-ANELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            P+  T+ ++L+  +   T A E + +VH    K G+ S L + N+L+  Y K   +D A
Sbjct: 229 LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDA 288

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  M  +D +S+NA+I G A+ G   EA  +F++MQ  GF P   T+ + L+  V  
Sbjct: 289 RLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVST 348

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                 ++VH   V+   V ++ V +A + +Y +   + +A+ +F ++   +  ++N MI
Sbjct: 349 GAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMI 408

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A  +  +E+L LF +++   F      F  +LS    +  L+  +++H+  I    +
Sbjct: 409 GGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAI-DAGL 467

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +++V N+LV MYAKCG    AK++F ++   +   WT MIS   Q G   EA +LF++M
Sbjct: 468 VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQM 527

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  I  D  T+ SIL A A   +L   K++HS  + +G +S++  G+AL+ MYAK GS+
Sbjct: 528 LREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSV 587

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA + F +M ER++ SW  +I   AQ+G     L  F  M   G++P+  S ++VLSAC
Sbjct: 588 DDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSAC 647

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG + F S+TQ Y + P  EHY  MVD+L R+G  +EA+  +  MP EP +  
Sbjct: 648 SHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAP 707

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C  + NLE A+ AA +  K+ K + A+ YV +SNIYA  G WE    V+  M+
Sbjct: 708 WGALLGACVTYGNLEMAEFAAKERLKL-KPKSASTYVLLSNIYAATGNWEQKLLVRSMMQ 766

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            RG+RK    SW+E+ +++H F   D  HP++ EI  K+++L++ +K EGY PDT   L 
Sbjct: 767 RRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLR 826

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + D+E K ++L  HSE+LAI + L++TP  +PI V KNLR C+DCH A K ISK+TGREI
Sbjct: 827 NTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREI 886

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
             RD+ RFHHFKDG CSC D+W
Sbjct: 887 VARDAKRFHHFKDGVCSCGDYW 908



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 173/573 (30%), Positives = 298/573 (52%), Gaps = 10/573 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ YVK G++  A+ +F+ MV+R  +SWT++IGG +   + +EAF  F+ M+ + G  P
Sbjct: 71  LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQRE-GFIP 129

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T+ ++L+  +       + +VH+  +  G    L + N+LV  Y K   +D AR VF
Sbjct: 130 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 189

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M ++D  S+  +I G A+ G  +EA  LF++M+  G  P+  T+ + L+A    +  A
Sbjct: 190 DGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGA 249

Query: 192 LG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           L   ++VH    K  F+ ++ V NAL+ +Y+K   + +AR +F  M + D +S+N MI  
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGG 309

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A N    E+  +F ++Q   F      + +LL+   +    +  +++H   +    +S+
Sbjct: 310 LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           ++V ++ V MY +CG  ++A+ IF  L+  +   W AMI    Q+    EAL+LF++M R
Sbjct: 370 LRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR 429

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                D  TF +IL A+    +L   K++HS+ I +G + ++  G+AL+ MYAK G+   
Sbjct: 430 EGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMY 488

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A Q F +M ERN+ +W  +IS  AQ+G        F  M++ G  PD+ + +S+LSAC+ 
Sbjct: 489 AKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACAS 548

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G +E  ++  +S      L        ++V +  + G  D+A ++   M  E D   W+
Sbjct: 549 TGALEW-VKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWT 606

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            +I     H        A D   KM KL    P
Sbjct: 607 VMIGGLAQHGR---GLDALDLFVKM-KLEGFKP 635



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 176/658 (26%), Positives = 311/658 (47%), Gaps = 61/658 (9%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           +IGGY++     +A K++  MR +GG  P+ +T+ ++L  C  P +     ++HA II+ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQ-PNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G+ S + +  +LV+ Y K   +D A+ +F +M +++ +S+  +I G A  G  +EA   F
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
           ++MQ  GF P+ +T+ + L+A      +   ++VH+  V      ++ V NAL+ +Y+K 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             + +AR +F  M E D  S+ VMI   A + + +E+  LF +++      +   + ++L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 283 --SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
             S + +   L+  +++H        IS+++V N+L+ MYAKCG  ++A+ +F  +    
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            + W AMI    Q G   EA  +F++M +     D  T+ S+L       +    K++H 
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             +  G +S++  GSA + MY + GS+ DA   F ++  RN+ +WNA+I   AQ    + 
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSAC-----------SHCGLIEEGL------------ 497
            L  F  M + G+ PD+ + +++LSA             H   I+ GL            
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHM 479

Query: 498 -----------QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---P 543
                      Q F+ M ++         +  M+  L + GC  EA  L  QM  E   P
Sbjct: 480 YAKCGNTMYAKQVFDDMVER-----NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D   + S++++C     LE+ K+          + D     A+ ++YA  G  +   +V 
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
             M ER V     YSW        V       H +  +      +L  +MK EG+KP+
Sbjct: 595 DDMLERDV-----YSWT-------VMIGGLAQHGRGLDAL----DLFVKMKLEGFKPN 636


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 271/738 (36%), Positives = 449/738 (60%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ ++K G++  A ++F+++  R  V+WT +I G ++  +F++A  LF  M  +G   P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG-VQP 310

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V F +LL  C+ P+   +  +VHA + + G+++ + +  +++  Y K   ++ A  VF
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +  ++ VS+ A+I GFA+ G  +EA   F +M   G +P+  TF + L A    + + 
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q+   +++  +  +  V  ALL +Y+K   + +A ++F ++ + + V++N MIT Y 
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +EQY  +L  F+ L       +   F+++L+V  +   L++G+ +H   +     S++ 
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+LV M+  CG    AK +F ++     V W  +I+ +VQ G  + A + F  M  + 
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D+ TF  +L A A   +L+ G++LH+ +  + F  +V  G+ L+ MY K GS++DA 
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAH 670

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F ++P++N+ SW ++I+  AQ+G  +  L+ F  M Q G +PD ++ +  LSAC+H G
Sbjct: 671 QVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAG 730

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LIEEGL +F SM +++ + P+ EHY  MVD+  R+G  +EA + + +M  EPD  +W ++
Sbjct: 731 LIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGAL 789

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C++H N+E A+KAA +  +++   D   +V +SNIYA AG W+ V++++K M +RGV
Sbjct: 790 LGACQVHLNVELAEKAAQKKLELDP-NDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            K    SW+E+  KVH F ++D+ HPQT EI  ++E L  EM++ GY PDT   LHD ++
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K ++L YHSERLAI + L+ TP  +PI++ KNLR C DCH A K ISKIT R+I  RD
Sbjct: 909 NEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARD 968

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFHHFKDG CSC DFW
Sbjct: 969 SNRFHHFKDGVCSCGDFW 986



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 301/588 (51%), Gaps = 52/588 (8%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K GN  +A+++F+ M ++   SW +L+GGY Q   + EAFKL   M  D   
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-V 207

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--A 127
            PD  TF ++L+ C++    ++  +++  I+K G+++ L +  +L++ +  I+C D+  A
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH--IKCGDIGDA 265

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            +VF  +P +D V++ ++ITG A+ G  ++A  LF  M+  G +P    F + L A    
Sbjct: 266 TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G++VHA + +  +   ++V  A+L +Y+K   + +A ++F  +   + VS+  MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A + +  E+   F ++  +  + ++  F ++L   ++   L+ G+QI    I     
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+ +V  +L+ MYAKCG  ++A  +F  +S  + V W AMI+AYVQ    + AL  F  +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  I  + +TF SIL       SL LGK +H  ++++G  S++   +AL+ M+   G L
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F +MP+R++VSWN +I+   Q+G  Q     F+ M +SG +PD ++   +L+AC
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625

Query: 488 -----------------------------------SHCGLIEEGLQYFNSMTQKYKLRPK 512
                                              + CG IE+  Q F+ +       PK
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL-------PK 678

Query: 513 KEHYA--SMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSC 555
           K  Y+  SM+    + G   EA +L  QM  E   PD I +   +++C
Sbjct: 679 KNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC 726



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 316/649 (48%), Gaps = 54/649 (8%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDY-VTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           S+  QF EA ++    R D      Y  T++ LL  C +     +  +++  I K G   
Sbjct: 86  SKAGQFNEAMQVL--ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQP 143

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            + + N+L++ Y K      A+++F +M +KD  S+N L+ G+ + GL EEA KL  +M 
Sbjct: 144 DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
               KP   TF + L+A     ++  GR+++  ++K  +  ++FV  AL++++ K   + 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           +A K+F  +P  D V++  MIT  A + ++K++  LF+ ++       +  F +LL    
Sbjct: 264 DATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACN 323

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +   L+ G+++H +       +E+ V  +++ MY KCG  E+A E+F  +   + V WTA
Sbjct: 324 HPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI+ + Q G ++EA   F +M  + I  ++ TF SIL A +  ++L  G+Q+   +I +G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           + S+    +ALL MYAK GSLKDA + F+++ ++N+V+WNA+I+A  Q+      L +F+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            +++ G +P+S +  S+L+ C     +E G ++ + +  K  L        ++V +    
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNC 562

Query: 527 GCFDEAEKLMAQMP----------------------------------FEPDEIMWSSVI 552
           G    A+ L   MP                                   +PD+I ++ ++
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           N+C   + L   ++    + +     D      + ++Y   G  E   QV   + ++ V 
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV- 681

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
               YSW  + +           + Q    +  +E L  +M++EG KPD
Sbjct: 682 ----YSWTSMITG----------YAQHGRGKEALE-LFYQMQQEGVKPD 715



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 252/487 (51%), Gaps = 9/487 (1%)

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G  ++ ++  S      K RC+     VF ++  KD+   NA++   +K G   EA+++ 
Sbjct: 46  GIETLRMLTTSFSGRCPKGRCV-----VFADI--KDTQKANAVLNRLSKAGQFNEAMQVL 98

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
             +     +    T++A L   +   ++  G +++  + K+    ++F+ N L+++Y+K 
Sbjct: 99  ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKC 158

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
              + A+++F +M E D  S+N+++  Y  +  Y+E+ KL  ++        +  F ++L
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +  A+  ++  GR+++   +     +++ V  +L++M+ KCG   +A ++F NL     V
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT+MI+   + G  ++A NLF  M    +  D+  F S+LRA     +L  GK++H+ +
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
              G+ + ++ G+A+L MY K GS++DA++ F  +  RN+VSW A+I+  AQ+G      
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++SG +P+ V+ +S+L ACS    ++ G Q  + + +       +   A ++ +
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTA-LLSM 457

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             + G   +A ++  ++  + + + W+++I +   H+  + A      L K     +++ 
Sbjct: 458 YAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 583 YVAMSNI 589
           + ++ N+
Sbjct: 517 FTSILNV 523



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 41/455 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +N VS   +I+G+ + G +  A   FN M+                             
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI----------------------------- 405

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
              + G +P+ VTF ++L  CS P       Q+   II+ GY S   +  +L+  Y K  
Sbjct: 406 ---ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A RVF+++ +++ V++NA+IT + +    + A+  F  +   G KP+  TF + L+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                  + LG+ VH  ++K     ++ V+NAL+ ++     ++ A+ LF +MP+ D VS
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS 582

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  +  + + + +   F+ +Q +     +  F+ LL+  A+   L  GR++H    
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 +V V   L+ MY KCG  E+A ++F  L   +   WT+MI+ Y Q G  +EAL 
Sbjct: 643 EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALE 702

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF--MSNVFSGSALLDM 420
           LF +M +  +  D  TF   L A A    +  G  LH F     F     +     ++D+
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDL 760

Query: 421 YAKSGSLKDAIQTFKEM---PERNIVSWNALISAC 452
           + ++G L +A++   +M   P+  +  W AL+ AC
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRV--WGALLGAC 793



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 32/183 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I+G+V+ G                             KNQ   AF  F
Sbjct: 575 MPKRDLVSWNTIIAGFVQHG-----------------------------KNQV--AFDYF 603

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  PD +TF  LL+ C+ P+   E  ++HA I +  ++  +++   L+  Y K
Sbjct: 604 -KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTK 662

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A +VF ++P+K+  S+ ++ITG+A+ G  +EA++LF +MQ  G KP   TF  A
Sbjct: 663 CGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGA 722

Query: 181 LSA 183
           LSA
Sbjct: 723 LSA 725



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI------------LCRSGCFDEAE 533
           ACS C    EG++    +T  +  R  K       DI            L ++G F+EA 
Sbjct: 36  ACSSCVPTHEGIETLRMLTTSFSGRCPKGRCVVFADIKDTQKANAVLNRLSKAGQFNEAM 95

Query: 534 KLMAQMPFEPDEI---MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           +++ ++     +I    +S+++  C   KNL   ++  + + K     D   +  + N+Y
Sbjct: 96  QVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMY 155

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           A  G   S  Q+   MRE+ V     YSW
Sbjct: 156 AKCGNTISAKQIFDDMREKDV-----YSW 179


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 271/738 (36%), Positives = 449/738 (60%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ ++K G++  A ++F+++  R  V+WT +I G ++  +F++A  LF  M  +G   P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG-VQP 310

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V F +LL  C+ P+   +  +VHA + + G+++ + +  +++  Y K   ++ A  VF
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +  ++ VS+ A+I GFA+ G  +EA   F +M   G +P+  TF + L A    + + 
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q+   +++  +  +  V  ALL +Y+K   + +A ++F ++ + + V++N MIT Y 
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +EQY  +L  F+ L       +   F+++L+V  +   L++G+ +H   +     S++ 
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+LV M+  CG    AK +F ++     V W  +I+ +VQ G  + A + F  M  + 
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D+ TF  +L A A   +L+ G++LH+ +  + F  +V  G+ L+ MY K GS++DA 
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAH 670

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F ++P++N+ SW ++I+  AQ+G  +  L+ F  M Q G +PD ++ +  LSAC+H G
Sbjct: 671 QVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAG 730

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LIEEGL +F SM +++ + P+ EHY  MVD+  R+G  +EA + + +M  EPD  +W ++
Sbjct: 731 LIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGAL 789

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C++H N+E A+KAA +  +++   D   +V +SNIYA AG W+ V++++K M +RGV
Sbjct: 790 LGACQVHLNVELAEKAAQKKLELDP-NDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            K    SW+E+  KVH F ++D+ HPQT EI  ++E L  EM++ GY PDT   LHD ++
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K ++L YHSERLAI + L+ TP  +PI++ KNLR C DCH A K ISKIT R+I  RD
Sbjct: 909 NEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARD 968

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFHHFKDG CSC DFW
Sbjct: 969 SNRFHHFKDGVCSCGDFW 986



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 301/588 (51%), Gaps = 52/588 (8%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K GN  +A+++F+ M ++   SW +L+GGY Q   + EAFKL   M  D   
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-V 207

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--A 127
            PD  TF ++L+ C++    ++  +++  I+K G+++ L +  +L++ +  I+C D+  A
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH--IKCGDIGDA 265

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            +VF  +P +D V++ ++ITG A+ G  ++A  LF  M+  G +P    F + L A    
Sbjct: 266 TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHP 325

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G++VHA + +  +   ++V  A+L +Y+K   + +A ++F  +   + VS+  MI
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A + +  E+   F ++  +  + ++  F ++L   ++   L+ G+QI    I     
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+ +V  +L+ MYAKCG  ++A  +F  +S  + V W AMI+AYVQ    + AL  F  +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  I  + +TF SIL       SL LGK +H  ++++G  S++   +AL+ M+   G L
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F +MP+R++VSWN +I+   Q+G  Q     F+ M +SG +PD ++   +L+AC
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625

Query: 488 -----------------------------------SHCGLIEEGLQYFNSMTQKYKLRPK 512
                                              + CG IE+  Q F+ +       PK
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL-------PK 678

Query: 513 KEHYA--SMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSC 555
           K  Y+  SM+    + G   EA +L  QM  E   PD I +   +++C
Sbjct: 679 KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC 726



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 316/649 (48%), Gaps = 54/649 (8%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDY-VTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           S+  QF EA ++    R D      Y  T++ LL  C +     +  +++  I K G   
Sbjct: 86  SKAGQFNEAMQVL--ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQP 143

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            + + N+L++ Y K      A+++F +M +KD  S+N L+ G+ + GL EEA KL  +M 
Sbjct: 144 DIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
               KP   TF + L+A     ++  GR+++  ++K  +  ++FV  AL++++ K   + 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           +A K+F  +P  D V++  MIT  A + ++K++  LF+ ++       +  F +LL    
Sbjct: 264 DATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACN 323

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +   L+ G+++H +       +E+ V  +++ MY KCG  E+A E+F  +   + V WTA
Sbjct: 324 HPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTA 383

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI+ + Q G ++EA   F +M  + I  ++ TF SIL A +  ++L  G+Q+   +I +G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           + S+    +ALL MYAK GSLKDA + F+++ ++N+V+WNA+I+A  Q+      L +F+
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            +++ G +P+S +  S+L+ C     +E G ++ + +  K  L        ++V +    
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNC 562

Query: 527 GCFDEAEKLMAQMP----------------------------------FEPDEIMWSSVI 552
           G    A+ L   MP                                   +PD+I ++ ++
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           N+C   + L   ++    + +     D      + ++Y   G  E   QV   + ++ V 
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV- 681

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
               YSW  + +           + Q    +  +E L  +M++EG KPD
Sbjct: 682 ----YSWTSMIAG----------YAQHGRGKEALE-LFYQMQQEGVKPD 715



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 252/487 (51%), Gaps = 9/487 (1%)

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G  ++ ++  S      K RC+     VF ++  KD+   NA++   +K G   EA+++ 
Sbjct: 46  GIETLRMLTTSFSGRCPKGRCV-----VFADI--KDTQKANAVLNRLSKAGQFNEAMQVL 98

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
             +     +    T++A L   +   ++  G +++  + K+    ++F+ N L+++Y+K 
Sbjct: 99  ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKC 158

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
              + A+++F +M E D  S+N+++  Y  +  Y+E+ KL  ++        +  F ++L
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +  A+  ++  GR+++   +     +++ V  +L++M+ KCG   +A ++F NL     V
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT+MI+   + G  ++A NLF  M    +  D+  F S+LRA     +L  GK++H+ +
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
              G+ + ++ G+A+L MY K GS++DA++ F  +  RN+VSW A+I+  AQ+G      
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++SG +P+ V+ +S+L ACS    ++ G Q  + + +       +   A ++ +
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTA-LLSM 457

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             + G   +A ++  ++  + + + W+++I +   H+  + A      L K     +++ 
Sbjct: 458 YAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516

Query: 583 YVAMSNI 589
           + ++ N+
Sbjct: 517 FTSILNV 523



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 41/455 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +N VS   +I+G+ + G +  A   FN M+                             
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMI----------------------------- 405

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
              + G +P+ VTF ++L  CS P       Q+   II+ GY S   +  +L+  Y K  
Sbjct: 406 ---ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A RVF+++ +++ V++NA+IT + +    + A+  F  +   G KP+  TF + L+
Sbjct: 463 SLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                  + LG+ VH  ++K     ++ V+NAL+ ++     ++ A+ LF +MP+ D VS
Sbjct: 523 VCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS 582

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  +  + + + +   F+ +Q +     +  F+ LL+  A+   L  GR++H    
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 +V V   L+ MY KCG  E+A ++F  L   +   WT+MI+ Y Q G  +EAL 
Sbjct: 643 EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALE 702

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF--MSNVFSGSALLDM 420
           LF +M +  +  D  TF   L A A    +  G  LH F     F     +     ++D+
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDL 760

Query: 421 YAKSGSLKDAIQTFKEM---PERNIVSWNALISAC 452
           + ++G L +A++   +M   P+  +  W AL+ AC
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRV--WGALLGAC 793



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 32/183 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I+G+V+ G                             KNQ   AF  F
Sbjct: 575 MPKRDLVSWNTIIAGFVQHG-----------------------------KNQV--AFDYF 603

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  PD +TF  LL+ C+ P+   E  ++HA I +  ++  +++   L+  Y K
Sbjct: 604 -KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTK 662

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A +VF ++P+K+  S+ ++I G+A+ G  +EA++LF +MQ  G KP   TF  A
Sbjct: 663 CGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGA 722

Query: 181 LSA 183
           LSA
Sbjct: 723 LSA 725


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/781 (37%), Positives = 454/781 (58%), Gaps = 44/781 (5%)

Query: 1    MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
            MP +N  S N +++GY     ++ ARELF+ M +R +VSW ++I GY   + + EA+ +F
Sbjct: 290  MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 349

Query: 61   VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
            V M RT   + PD   F  +LS  +  D    +  +    IK GY   +++ ++++++Y 
Sbjct: 350  VKMCRTV--ARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYT 407

Query: 120  KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +   LDLA   F+ MP+++  S+  +I  FA+ G  ++AI+L+  +     + +  T  A
Sbjct: 408  RNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP----EQTVATKTA 463

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             ++A   +  I   R +   ++  N V      NA++  Y+++  + EA+ LF +MP  +
Sbjct: 464  MMTAYAQVGRIQKARLIFDEILNPNVV----AWNAIIAGYTQNGMLKEAKDLFQKMPVKN 519

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              S+  MI  +  NE+ +E+L+L  EL  +    S   F++ LS  AN  D++IGR IH+
Sbjct: 520  SASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHS 579

Query: 300  QTIVTTAISEVKVANSLVDMYAKCGRFEE------------------------------- 328
              I T       V N L+ MYAKCG  E+                               
Sbjct: 580  LAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDD 639

Query: 329  AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
            A+ +F  +     V WTA+ISAYVQ G+ E AL+LF++M    I  +Q T  S+L A   
Sbjct: 640  ARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGN 699

Query: 389  LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
            L ++ LG+Q H+ + + GF + +F G++L+ MY K G  +D    F+EMPE ++++WNA+
Sbjct: 700  LGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAV 758

Query: 449  ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
            +  CAQNG  +  +K FE M   G  PD +S L VL ACSH GL++EG  +FNSMTQKY 
Sbjct: 759  LVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYG 818

Query: 509  LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
            + P   HY  MVD+L R+G   EAE L+  MP +PD ++W +++ +CRIH+N+E  ++ A
Sbjct: 819  IMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVA 878

Query: 569  DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            ++LF+M K + +A YV +SN++A  G W+ V++++K M+++G+ K    SW+++K+K+H 
Sbjct: 879  ERLFQMTKPK-SATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHC 937

Query: 629  FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
            F   D  H Q  EI   ++      +  GY PDT+  LHD +EE K   L YHSE+LA+ 
Sbjct: 938  FVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVV 997

Query: 689  FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
            F +++TP GSPI ++KNLR C DCH  +K +SK+T R+I +RD +RFHHF+DG CSC D+
Sbjct: 998  FGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDY 1057

Query: 749  W 749
            W
Sbjct: 1058 W 1058



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 296/587 (50%), Gaps = 53/587 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS N +I+GY ++G +  AR LF++ V +   +WTIL+ GY+++ +  EA ++F
Sbjct: 197 MIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVF 256

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M     ++ + V++  ++SG  +        ++  ++ +    S     NS+V  YC 
Sbjct: 257 ESM-----TERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS----WNSVVTGYCH 307

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR +F +MP+++SVS+  +I+G+       EA  +FV+M     +P    F   
Sbjct: 308 CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVV 367

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA  GL D+ L   +    +KT +  +V V +A+L+ Y+++  +  A   F  MPE + 
Sbjct: 368 LSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE 427

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+  MI  +A   +  ++++L+  +     +++    + +++  A     Q+GR    +
Sbjct: 428 YSWTTMIAAFAQCGRLDDAIQLYERVP----EQTVATKTAMMTAYA-----QVGRIQKAR 478

Query: 301 TIVTTAISEVKVA-NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            I    ++   VA N+++  Y + G  +EAK++F  +   ++  W AMI+ +VQ     E
Sbjct: 479 LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL L IE+ R+      ++F S L A A +  + +G+ +HS  I++G   N +  + L+ 
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLIS 598

Query: 420 MYAKSGS-------------------------------LKDAIQTFKEMPERNIVSWNAL 448
           MYAK G+                               L DA   F++MP+R++VSW A+
Sbjct: 599 MYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAI 658

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           ISA  Q G  +  L  F DM+  G +P+ +++ S+LSAC + G I+ G Q F+++  K  
Sbjct: 659 ISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLG 717

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
                    S++ +  + G +++   +  +MP E D I W++V+  C
Sbjct: 718 FDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGC 762



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 202/447 (45%), Gaps = 92/447 (20%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L  CN+ +    ++  ++ ARRVF EM Q+D VS+N++I G+++ G  +EA  LF     
Sbjct: 171 LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----- 225

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
                                D  +G+ +  + +             LL  Y+K   + E
Sbjct: 226 ---------------------DAFVGKNIRTWTI-------------LLTGYAKEGRIEE 251

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR++F  M E + VS+N MI+ Y  N   K + KLF E+                     
Sbjct: 252 AREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM--------------------- 290

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
                                E  VA  NS+V  Y  C R  EA+E+F  +   ++V W 
Sbjct: 291 --------------------PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWM 330

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            MIS YV   +  EA ++F++MCR     DQ+ F  +L A   L  L L   L    I++
Sbjct: 331 VMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKT 390

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           G+  +V  GSA+L+ Y ++GSL  A+  F+ MPERN  SW  +I+A AQ G     ++ +
Sbjct: 391 GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY 450

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E + +      +    ++++A +  G I++    F+ +     L P    + +++    +
Sbjct: 451 ERVPEQTVATKT----AMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQ 501

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +G   EA+ L  +MP + +   W+++I
Sbjct: 502 NGMLKEAKDLFQKMPVK-NSASWAAMI 527



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 162/397 (40%), Gaps = 102/397 (25%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           ++F  N  +    +   V EAR++F EM + D VS+N MI  Y+ N +  E+  LF    
Sbjct: 170 HLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF---- 225

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                                 D  +G+ I T TI+ T              YAK GR E
Sbjct: 226 ----------------------DAFVGKNIRTWTILLTG-------------YAKEGRIE 250

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           EA+E+F +++  + V W AMIS YVQ G+L+ A  LF EM   N++              
Sbjct: 251 EAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA-------------- 296

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
                                    S ++++  Y     + +A + F +MPERN VSW  
Sbjct: 297 -------------------------SWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMV 331

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +IS      D       F  M ++  +PD    + VLSA +  GL  + L+   S     
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GL--DDLELIGS----- 382

Query: 508 KLRP--KKEHY-------ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            LRP   K  Y       +++++   R+G  D A      MP E +E  W+++I +    
Sbjct: 383 -LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQC 440

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
             L+     A QL++    +  A   AM   YA  G+
Sbjct: 441 GRLD----DAIQLYERVPEQTVATKTAMMTAYAQVGR 473



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 125/314 (39%), Gaps = 60/314 (19%)

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+ +    + GR EEA+ +F  +     V W +MI+ Y Q G ++EA  LF         
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF--------- 225

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
                               +GK + ++ I             LL  YAK G +++A + 
Sbjct: 226 -----------------DAFVGKNIRTWTI-------------LLTGYAKEGRIEEAREV 255

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F+ M ERN+VSWNA+IS   QNGD +   K F++M +     +  S  SV++   HC  +
Sbjct: 256 FESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNSVVTGYCHCYRM 311

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL-----MAQMPFEPDEIMW 548
            E  + F+ M       P++   + MV I       D  E       M +    PD+ ++
Sbjct: 312 SEARELFDQM-------PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIF 364

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             V+++     +LE          K     D     A+ N Y   G  +      + M E
Sbjct: 365 VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPE 424

Query: 609 RGVRKVTAYSWVEL 622
           R       YSW  +
Sbjct: 425 R-----NEYSWTTM 433


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/742 (38%), Positives = 448/742 (60%), Gaps = 3/742 (0%)

Query: 9   TNMLISGYVKSGNLATARELFN-SMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +F+ +  +R  VSW  L+  Y + ++   A K+F +M   G
Sbjct: 138 ANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM-VWG 196

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+   F+ +++ C+         +VHA +I+ GY+  +   N+LVD Y K+  + +A
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             VF ++P+ D VS+NA I+G    G ++ A++L ++M+  G  P+ FT ++ L A  G 
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGS 316

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               LGRQ+H F+VK N   + ++A  L+D+Y+KH  + +A+K+F  +P+ D V +N +I
Sbjct: 317 GAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALI 376

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +   Q+ E+L LF  ++   FD ++   + +L   A+   +   RQ+H        +
Sbjct: 377 SGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFL 436

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+  V N L+D Y KC     A  +F        + +T+MI+A  Q  + E+A+ LF+EM
Sbjct: 437 SDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEM 496

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +  D    +S+L A A L++   GKQ+H+ +I+  FMS+VF+G+AL+  YAK GS+
Sbjct: 497 LRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSI 556

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +PE+ +VSW+A+I   AQ+G  +  L  F  MV     P+ +++ SVL AC
Sbjct: 557 EDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCAC 616

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL++E  +YFNSM + + +   +EHYA M+D+L R+G  D+A +L+  MPF+ +  +
Sbjct: 617 NHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAV 676

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ + R+H++ E  + AA++LF +E  + +  +V ++N YA AG W+ V++V+K M+
Sbjct: 677 WGALLAASRVHRDPELGRLAAEKLFILEPEK-SGTHVLLANTYASAGMWDDVAKVRKLMK 735

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +  V+K  A SWVELK KVH F   D+ HP+  +I  K++ L   M K GY P+    LH
Sbjct: 736 DSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLH 795

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D D+  K   L +HSERLA+AFALI+TP G+PI V KNLR C DCHAA K IS I  REI
Sbjct: 796 DVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREI 855

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+DG CSCRD+W
Sbjct: 856 IIRDINRFHHFRDGACSCRDYW 877



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/600 (29%), Positives = 308/600 (51%), Gaps = 10/600 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N L+S Y K     +AR +F+ + D   VSW+ L+  YS     R+A   F  MR+
Sbjct: 37  AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRS 96

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                 ++V    L   C+ PD A    Q+HA  +  G    + + N+LV  Y     +D
Sbjct: 97  CSVRCNEFVLPVVL--KCA-PD-AGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVD 152

Query: 126 LARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            AR VF E   ++++VS+N L++ + K      A+K+F EM   G +P++F F+  ++A 
Sbjct: 153 EARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNAC 212

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G  D+  GR+VHA V++T + ++VF ANAL+D+YSK   +  A  +FG++PE D VS+N
Sbjct: 213 TGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWN 272

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             I+    +   + +L+L  +++ +    + F  S++L   A      +GRQIH   +  
Sbjct: 273 AFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKA 332

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
            A S+  +A  LVDMYAK G  ++AK++F  +     V W A+IS         EAL+LF
Sbjct: 333 NADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLF 392

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M +     ++ T A++L+++A L ++S  +Q+H+   + GF+S+    + L+D Y K 
Sbjct: 393 CRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKC 452

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
             L  A + F++    +I+++ ++I+A +Q    +  +K F +M++ G  PD   L S+L
Sbjct: 453 DCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLL 512

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +AC+     E+G Q    + ++  +       A +V    + G  ++A+   + +P E  
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDVFAGNA-LVYTYAKCGSIEDADLAFSGLP-EKG 570

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            + WS++I     H +    K+A D   +M     +  ++ M+++         V + K+
Sbjct: 571 VVSWSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 271/571 (47%), Gaps = 39/571 (6%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T   LL+  +   +  +   +HA ++K G  ++    N L+  Y K R    ARRVF E+
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEI 63

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P    VS+++L+T ++   +  +A+  F  M+    + ++F     L       D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCA---PDAGFGT 120

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWN 253
           Q+HA  + T    ++FVANAL+ +Y     V EAR +F E   E + VS+N +++ Y  N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           ++   ++K+F E+ +     ++F FS +++      DL+ GR++H   I T    +V  A
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+LVDMY+K G    A  +F  +     V W A IS  V  G+ + AL L ++M  + + 
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            +  T +SIL+A A   + +LG+Q+H F++++   S+ +    L+DMYAK G L DA + 
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  +P+R++V WNALIS C+        L  F  M + G+  +  +L +VL + +    I
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420

Query: 494 EEGLQ-----------------------YFNSMTQKYKLRPKKEH-------YASMVDIL 523
            +  Q                       Y+      Y  R  ++H       + SM+  L
Sbjct: 421 SDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITAL 480

Query: 524 CRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
            +    ++A KL  +M     +PD  + SS++N+C      E  K+    L K + + D 
Sbjct: 481 SQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDV 540

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
               A+   YA  G  E        + E+GV
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPEKGV 571


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/740 (37%), Positives = 444/740 (60%), Gaps = 2/740 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LIS Y + G+L  ARELFN+M  R  +SW  +I GY+++    EA KL+  M+++G  
Sbjct: 424  NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG-V 482

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             P  VTF  LLS C+     ++   +H DI++ G  S   + N+L++ Y +   +  A+ 
Sbjct: 483  KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF+    +D +S+N++I G A+ G  E A KLF+EM+  G +P   TFA+ L        
Sbjct: 543  VFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEA 602

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + LGRQ+H  ++++    +V + NAL+++Y +   + +A ++F  +   + +S+  MI  
Sbjct: 603  LELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            +A   + +++ +LF ++Q   F   +  FS++L    +   L  G+++    + +    +
Sbjct: 663  FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELD 722

Query: 310  VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
              V N+L+  Y+K G   +A+++F  + +   + W  MI+ Y Q G    AL    +M  
Sbjct: 723  TGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQE 782

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
              +  ++ +F SIL A +  ++L  GK++H+ +++     +V  G+AL+ MYAK GSL++
Sbjct: 783  QGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEE 842

Query: 430  AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            A + F    E+N+V+WNA+I+A AQ+G A   L  F  M + G +PD  +  S+LSAC+H
Sbjct: 843  AQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNH 902

Query: 490  CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             GL+ EG + F+S+  ++ L P  EHY  +V +L R+G F EAE L+ QMPF PD  +W 
Sbjct: 903  SGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWE 962

Query: 550  SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            +++ +CRIH N+  A+ AA+   K+   R+ A YV +SN+YA AG+W+ V+++++ M  R
Sbjct: 963  TLLGACRIHGNVALAEHAANNALKLNA-RNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGR 1021

Query: 610  GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            G+RK    SW+E+ + +H F A D  HP+T EI  +++ L  EM++ GY PDT   LH+ 
Sbjct: 1022 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNL 1081

Query: 670  DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            D+E +  SL  HSERLAIA+ L+ TP G+PI + KNLR C DCH A K ISK+ GREI  
Sbjct: 1082 DKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIA 1141

Query: 730  RDSSRFHHFKDGFCSCRDFW 749
            RDS+RFH FK+G CSC DFW
Sbjct: 1142 RDSNRFHTFKNGKCSCEDFW 1161



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 179/567 (31%), Positives = 315/567 (55%), Gaps = 10/567 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L + +V+ G++A A++   +  DR  V +  LI   +Q   + EAF+ +  MR+DG    
Sbjct: 325 LATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG-VVM 383

Query: 72  DYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +  T+ ++L+ CS      A ELI  H+ I + G++S + I NSL+  Y +   L  AR 
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELI--HSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP++D +S+NA+I G+A+     EA+KL+ +MQ  G KP   TF   LSA    + 
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + G+ +H  ++++    N  +ANAL+++Y +   ++EA+ +F      D +S+N MI  
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A +  Y+ + KLF E++    +  +  F+++L    N   L++GRQIH   I +    +
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V + N+L++MY +CG  ++A E+F +L H + + WTAMI  +  +G   +A  LF +M  
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                 ++TF+SIL+A    A L  GK++ + ++ SG+  +   G+AL+  Y+KSGS+ D
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTD 741

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F +MP R+I+SWN +I+  AQNG     L+    M + G   +  S +S+L+ACS 
Sbjct: 742 ARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSS 801

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +EEG +    + ++ K++      A+++ +  + G  +EA+++      E + + W+
Sbjct: 802 FSALEEGKRVHAEIVKR-KMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT-EKNVVTWN 859

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEK 576
           ++IN+   H     A KA D    M+K
Sbjct: 860 AMINAYAQHG---LASKALDFFNCMDK 883



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 190/696 (27%), Positives = 327/696 (46%), Gaps = 68/696 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K  +L +AR++F+ +  R  VS+  ++G Y+QK    E   LF  M ++G  
Sbjct: 222 NSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEG-I 280

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA-- 127
            PD VT+  LL   + P   +E  ++H   +  G NS + +  +L   +  +RC D+A  
Sbjct: 281 PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMF--VRCGDVAGA 338

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           ++  +    +D V +NALI   A+ G  EEA + + +M+  G   +  T+ + L+A    
Sbjct: 339 KQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTS 398

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G  +H+ + +     +V + N+L+ +Y++   +  AR+LF  MP+ D +S+N +I
Sbjct: 399 KALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAII 458

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA  E   E++KL++++Q       +  F  LLS   N      G+ IH   + +   
Sbjct: 459 AGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIK 518

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S   +AN+L++MY +CG   EA+ +F        + W +MI+ + Q G+ E A  LF+EM
Sbjct: 519 SNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEM 578

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  +  D+ TFAS+L       +L LG+Q+H  +I SG   +V  G+AL++MY + GSL
Sbjct: 579 KKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSL 638

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA + F  +  RN++SW A+I   A  G+ +   + F  M   G++P   +  S+L AC
Sbjct: 639 QDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKAC 698

Query: 488 SHCGLIEEGLQYF-NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
                ++EG +   + +   Y+L     +  +++    +SG   +A K+  +MP   D +
Sbjct: 699 MSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP-NRDIM 755

Query: 547 MWS-----------------------------------SVINSCRIHKNLEFAKKAADQL 571
            W+                                   S++N+C     LE  K+   ++
Sbjct: 756 SWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV----RKVTAYSWVELKSKVH 627
            K +   D     A+ ++YA  G  E   +V     E+ V      + AY+   L SK  
Sbjct: 816 VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKAL 875

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            F                       M KEG KPD S
Sbjct: 876 DF--------------------FNCMDKEGIKPDGS 891



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 182/709 (25%), Positives = 338/709 (47%), Gaps = 75/709 (10%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N+LI+ YVK  +++ A ++F  M  R  +SW  LI  Y+Q+   ++AF+LF +M+T  G
Sbjct: 120 SNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQT-AG 178

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P  +T+ ++L+ C  P       ++H+ II+ GY     + NSL++ Y K   L  AR
Sbjct: 179 FIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSAR 238

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  + ++D VS+N ++  +A++   EE I LF +M   G  P   T+   L A    +
Sbjct: 239 QVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS 298

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+++H   V      ++ V  AL  ++ +   V  A++      + D V YN +I 
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             A +  Y+E+ + + +++      ++  + ++L+  +    L  G  IH+        S
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSS 418

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V++ NSL+ MYA+CG    A+E+F  +     + W A+I+ Y ++ +  EA+ L+ +M 
Sbjct: 419 DVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQ 478

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +   + TF  +L A    ++ S GK +H  ++RSG  SN    +AL++MY + GS+ 
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIM 538

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A   F+    R+I+SWN++I+  AQ+G  +A  K F +M + G +PD ++  SVL  C 
Sbjct: 539 EAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCK 598

Query: 489 H-----------------------------------CGLIEEGLQYFNSM---------- 503
           +                                   CG +++  + F+S+          
Sbjct: 599 NPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTA 658

Query: 504 --------------------TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM---P 540
                                Q    +P K  ++S++     S C DE +K++A +    
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           +E D  + +++I++     ++  A+K  D++      RD   +  M   YA  G   +  
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPN----RDIMSWNKMIAGYAQNGLGGTAL 774

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI-RRKIEN 648
           Q    M+E+GV  +  +S+V + +    F+A +E      EI +RK++ 
Sbjct: 775 QFAYQMQEQGV-VLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQG 822



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 302/630 (47%), Gaps = 59/630 (9%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           ++ +   +  L+  C+   +  E  ++HA +++ G    + + N L++ Y K R +  A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF +MP++D +S+N+LI+ +A++G  ++A +LF EMQ  GF PS  T+ + L+A    A
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           ++  G+++H+ +++  +  +  V N+LL++Y K + +  AR++F  +   D VSYN M+ 
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA     +E + LF ++        +  +  LL        L  G++IH   +     S
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +++V  +L  M+ +CG    AK+     +    V + A+I+A  Q G+ EEA   + +M 
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  ++ T+ S+L A +   +L  G+ +HS +   G  S+V  G++L+ MYA+ G L 
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A + F  MP+R+++SWNA+I+  A+  D    +K ++ M   G +P  V+ L +LSAC+
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 489 H-----------------------------------CGLIEEGLQYFNSMTQKYKLRPKK 513
           +                                   CG I E    F     +  +    
Sbjct: 498 NSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS--- 554

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
             + SM+    + G ++ A KL  +M     EPD+I ++SV+  C+  + LE  ++    
Sbjct: 555 --WNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           + +     D     A+ N+Y   G  +   +V  ++R R V      SW  +   +  F 
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNV-----MSWTAM---IGGFA 664

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
              E         RK   L  +M+ +G+KP
Sbjct: 665 DQGE--------DRKAFELFWQMQNDGFKP 686


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/744 (38%), Positives = 443/744 (59%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L++ Y +  N  +A ++F+ M  +  VS+  LI G +Q+     A +LF  M+ 
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D    PD VT A+LLS C+      +  Q+H+ +IK G +S +I+  +L+D Y     + 
Sbjct: 308 DY-LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIK 366

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  +F     ++ V +N ++  F K     E+ ++F +MQ  G  P+ FT+ + L    
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            +  + LG Q+H  V+KT F  NV+V + L+D+Y+KH  +  A  +   + E D VS+  
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTA 486

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+ YA +  + E+LK F+E+           FS+ +S  A    L  GRQIH Q+ V+ 
Sbjct: 487 LISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSG 546

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              ++ + N+LV +YA+CGR +EA   F  +    ++ W  +IS + Q G  E+AL +F 
Sbjct: 547 YSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFA 606

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M RA + A   TF S + A+A +A++  GKQ+H+ +I+ GF S++   +AL+  YAK G
Sbjct: 607 QMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCG 666

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA + F EMPE+N VSWNA+I+  +Q+G     +  FE M Q G  P+ V+ + VLS
Sbjct: 667 SIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLS 726

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+ +GL YF SM++++ L PK  HYA +VD++ R+G    A K + +MP EPD 
Sbjct: 727 ACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDA 786

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++++C +HKN+E  + AA  L ++E   D+A YV +SN+YAV+G+W+   Q ++ 
Sbjct: 787 TIWRTLLSACTVHKNVEVGEFAAQHLLELEP-EDSATYVLLSNMYAVSGKWDCRDQTRQM 845

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           MR RGV+K    SW+E+K+ VH F   D LHP  ++I   +  L ++  + GY  D    
Sbjct: 846 MRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSL 905

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L+D ++E K  ++  HSE+LAI F L++  +  PI VMKNLR C DCH+ IK +SKI+ R
Sbjct: 906 LNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNR 965

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRD+ RFHHF+ G CSC+D+W
Sbjct: 966 AIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 182/583 (31%), Positives = 315/583 (54%), Gaps = 6/583 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           + +N LI  Y K+G + +AR++F+++  + +VSW  +I G+SQ     EA  LF +M T 
Sbjct: 148 IISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTA 207

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G     YV F+++LSGC++    +   Q+HA + K+G +    +CN+LV  Y ++     
Sbjct: 208 GIFPTPYV-FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVS 266

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A +VF +M  KD VSFN+LI+G A++G ++ A++LF +M+    KP   T A+ LSA   
Sbjct: 267 AEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACAS 326

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              +  G Q+H++V+K     ++ V  ALLDLY     +  A ++F      + V +NVM
Sbjct: 327 NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVM 386

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  +   +   ES ++FR++Q      +QF + ++L    +   L +G QIHTQ I T  
Sbjct: 387 LVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF 446

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V V + L+DMYAK G+ + A  I   L+    V WTA+IS Y Q     EAL  F E
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKE 506

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    I +D   F+S + A A + +L+ G+Q+H+    SG+  ++  G+AL+ +YA+ G 
Sbjct: 507 MLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGR 566

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +K+A   F+++  ++ +SWN LIS  AQ+G  +  LK F  M ++  +    +  S +SA
Sbjct: 567 IKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSA 626

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            ++   I++G Q  ++M  K       E   +++    + G  ++A +   +MP E +++
Sbjct: 627 AANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP-EKNDV 684

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            W+++I     H    +  +A +   KM+++ +   +V    +
Sbjct: 685 SWNAMITGYSQHG---YGNEAVNLFEKMKQVGEMPNHVTFVGV 724



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 180/559 (32%), Positives = 282/559 (50%), Gaps = 22/559 (3%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           +V  N L+  Y   G+L    ++F  M +R+  SW  +I G+ +K        LF  M  
Sbjct: 45  SVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIE 104

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           +  S P  ++FA++L  CS          Q+HA II  G     II N L+  Y K   +
Sbjct: 105 ENVS-PTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLI 163

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR+VF  +  KDSVS+ A+I+GF++ G  EEAI LF EM   G  P+ + F++ LS  
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +    +G Q+HA V K       +V NAL+ LYS+    V A K+F +M   D VS+N
Sbjct: 224 TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+  A       +L+LF +++           ++LLS  A+   L  G Q+H+  I  
Sbjct: 284 SLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKA 343

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S++ V  +L+D+Y  C   + A E+F      + V W  M+ A+ +  NL E+  +F
Sbjct: 344 GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIF 403

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    +  +Q T+ SILR    + +L LG+Q+H+ VI++GF  NV+  S L+DMYAK 
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A    + + E ++VSW ALIS  AQ+      LK F++M+  G Q D++   S +
Sbjct: 464 GKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523

Query: 485 SACSHCGLIEEGLQ-----YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA----EKL 535
           SAC+    + +G Q     Y +  ++   +        ++V +  R G   EA    EK+
Sbjct: 524 SACAGIQALNQGRQIHAQSYVSGYSEDLSIGN------ALVSLYARCGRIKEAYLEFEKI 577

Query: 536 MAQMPFEPDEIMWSSVINS 554
            A+     D I W+ +I+ 
Sbjct: 578 DAK-----DSISWNGLISG 591



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 247/487 (50%), Gaps = 7/487 (1%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T+  LL  C    +  E  ++H  I+K G+ +  ++CN LVD Y  +  LD   +VF++M
Sbjct: 12  TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG-LADIALG 193
           P +   S++ +I+GF ++ ++   + LF  M      P++ +FA+ L A  G    I   
Sbjct: 72  PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+HA ++    + +  ++N L+ LY+K+  ++ ARK+F  +   D VS+  MI+ ++ N
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              +E++ LF E+       + + FS++LS         +G Q+H       +  E  V 
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVC 251

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+LV +Y++   F  A+++F+ +     V + ++IS   Q+G  + AL LF +M R  + 
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T AS+L A A   +L  G+QLHS+VI++G  S++    ALLD+Y     +K A + 
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F      N+V WN ++ A  +  +   + + F  M   G  P+  +  S+L  C+  G +
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 494 EEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           + G Q     TQ  K   +   Y  + ++D+  + G  D A  ++  +  E D + W+++
Sbjct: 432 DLGEQIH---TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTAL 487

Query: 552 INSCRIH 558
           I+    H
Sbjct: 488 ISGYAQH 494



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 155/263 (58%), Gaps = 1/263 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    ++LI  Y K G L TA  +  ++ +   VSWT LI GY+Q N F EA K F +M 
Sbjct: 449 NVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEM- 507

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G   D + F++ +S C+     N+  Q+HA     GY+  L I N+LV  Y +   +
Sbjct: 508 LNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRI 567

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A   F+++  KDS+S+N LI+GFA+ G  E+A+K+F +M     + S FTF +A+SA 
Sbjct: 568 KEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAA 627

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +A+I  G+Q+HA ++K  F  ++ V+NAL+  Y+K   + +AR+ F EMPE + VS+N
Sbjct: 628 ANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWN 687

Query: 245 VMITCYAWNEQYKESLKLFRELQ 267
            MIT Y+ +    E++ LF +++
Sbjct: 688 AMITGYSQHGYGNEAVNLFEKMK 710



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%)

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I A+  T+  +L       SL   K+LH  +++ GF +     + L+D+Y   G L   
Sbjct: 5   GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           ++ F++MP R++ SW+ +IS   +   +   L  F  M++    P  +S  SVL ACS
Sbjct: 65  VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACS 122


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/722 (39%), Positives = 442/722 (61%), Gaps = 2/722 (0%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           +F+ M +R  VS+  LI GY+Q N+F EAF+LF  +  +G     +V F T+L      +
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFV-FTTVLKLLVSME 60

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
            A     VH  ++K GY S   I  +L+D+Y    C+ +AR VF E+  KD VS+  +I 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
            +A+     EA++ F +M+  GFKP++FTFA  L A +GL +   G+ VH  V+KTN+  
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           +++V   LL+LY++     +A + FG+MP+ D + ++ MI+ +A + Q +++L++F +++
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                 +QF FS++L   A+   L + + IH   +     ++V V+N+L+  YAKCG  E
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           ++ E+F  LS  + V W  +I +YVQ G+ E AL+LF  M R  + A + T++SILRA A
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            LA+L LG Q+H    ++ +  +V  G+AL+DMYAK GS+KDA   F  +  R+ VSWNA
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I   + +G     +K F  M ++  +PD ++ + VLSACS+ G ++EG QYF SM Q Y
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            + P  EHY  MV ++ RSG  D+A K +  +PFEP  ++W +++ +C IH ++E  + +
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
           A ++ ++E  RD A +V +SNIYA A +W +V+ V+K M+ +GV+K    SW+E +  VH
Sbjct: 541 AQRVLELEP-RDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVH 599

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            FT  D  H     I   +E L  + +K GY P  +  L D +++ K   L  HSERLA+
Sbjct: 600 CFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLAL 659

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           AF L+  P G PI ++KNLR C DCH+ IKLISKI GR+I VRD +RFHHF++G CSC D
Sbjct: 660 AFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCAD 719

Query: 748 FW 749
           +W
Sbjct: 720 YW 721



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 237/457 (51%), Gaps = 3/457 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT     LI  Y  SG ++ ARE+F+ +  +  VSWT +I  Y++ + F EA + F  MR
Sbjct: 80  NTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMR 139

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+  TFA +L  C      +    VH  ++K  Y   L +   L++ Y +    
Sbjct: 140 V-AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDN 198

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A R F +MP+ D + ++ +I+ FA+ G +E+A+++F +M+     P+ FTF++ L A 
Sbjct: 199 DDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQAS 258

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  + L + +H   +K     +VFV+NAL+  Y+K  C+ ++ +LF  + + + VS+N
Sbjct: 259 ADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWN 318

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  Y      + +L LF  +   +   ++  +S++L   A    L++G Q+H  T  T
Sbjct: 319 TIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKT 378

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +V V N+L+DMYAKCG  ++A+ +F  L     V W A+I  Y   G   EA+ +F
Sbjct: 379 IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF 438

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
             M       D+ TF  +L A +    L  GKQ  + + +  G    +   + ++ +  +
Sbjct: 439 NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGR 498

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           SG+L  A++  +++P E +++ W AL+ AC  + D +
Sbjct: 499 SGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVE 535



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 44/197 (22%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            Q+    N LI  Y K G++  AR +F+ +  R  VSW  +I GYS      EA K+F +
Sbjct: 381 GQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF-N 439

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +    PD +TF  +LS CS                                      
Sbjct: 440 LMKETKCKPDELTFVGVLSACSNTGR---------------------------------- 465

Query: 123 CLDLARRVFKEMPQKDSVS-----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
            LD  ++ F  M Q   +      +  ++    + G  ++A+K    ++ + F+PS   +
Sbjct: 466 -LDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKF---IEDIPFEPSVMIW 521

Query: 178 AAALSAGVGLADIALGR 194
            A L A V   D+ LGR
Sbjct: 522 RALLGACVIHNDVELGR 538


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/707 (40%), Positives = 433/707 (61%), Gaps = 7/707 (0%)

Query: 47  YSQKNQFREAFKLFVDMRTDGG-SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
           +S+ +Q +EA  LF+ +R  G  +D   ++    + GC       +  QVH   IK G+ 
Sbjct: 67  FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGK--QVHCQCIKCGFV 124

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
             + +  SLVD Y K   ++   RVF EM  K+ VS+ +L+ G+ + GLNE+A+KLF +M
Sbjct: 125 EDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQM 184

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           Q  G KP+ FTFAA L        +  G QVH  V+K+     +FV N+++++YSK   V
Sbjct: 185 QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMV 244

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
            +A+ +F  M   + VS+N MI  +  N    E+ +LF  ++      +Q  F+T++ + 
Sbjct: 245 SDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPW 344
           AN  ++   +Q+H Q I   +  ++ +  +L+  Y+KC   ++A ++F  +  + + V W
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRA-NISADQATFASILRA-SAELASLSLGKQLHSFV 402
           TA+IS YVQ G  + A+NLF +M R   +  ++ TF+S+L A +A  AS+  GKQ HS  
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 424

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I+SGF + +   SAL+ MYAK G+++ A + FK   +R++VSWN++IS  AQ+G  + +L
Sbjct: 425 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSL 484

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           K FE+M     + D ++ + V+SAC+H GL+ EG +YF+ M + Y + P  EHY+ MVD+
Sbjct: 485 KIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDL 544

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             R+G  ++A  L+ +MPF     +W +++ +CR+H N++  + AA++L  ++  +D+A 
Sbjct: 545 YSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP-QDSAA 603

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           YV +SNIYA AG W+  ++V+K M  + V+K   YSW+E+K+K   F A D  HPQ++ I
Sbjct: 604 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 663

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
             K+E L   +K  GY PDT   LHD +EE K   L  HSERLAIAF LI TP G+PI +
Sbjct: 664 YLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQI 723

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C DCH  IKLISKI GR+I VRDS+RFHHFK G CSC D+W
Sbjct: 724 VKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 248/479 (51%), Gaps = 8/479 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K+ ++     +F+ M  +  VSWT L+ GY Q     +A KLF  M+ + G  P
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLE-GIKP 191

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA +L G +      + +QVH  +IK G +S + + NS+V+ Y K   +  A+ VF
Sbjct: 192 NPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVF 251

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +++VS+N++I GF   GL+ EA +LF  M+  G K +   FA  +     + +++
Sbjct: 252 DSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS 311

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VSYNVMITCY 250
             +Q+H  V+K     ++ +  AL+  YSK   + +A KLF  M  V   VS+  +I+ Y
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGY 371

Query: 251 AWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAIS 308
             N +   ++ LF +++     + ++F FS++L+  A     ++ G+Q H+ +I +   +
Sbjct: 372 VQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 431

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V+++LV MYAK G  E A E+F        V W +MIS Y Q G  +++L +F EM 
Sbjct: 432 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 491

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSL 427
             N+  D  TF  ++ A      ++ G++    +++    +  +   S ++D+Y+++G L
Sbjct: 492 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGML 551

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + A+    +MP       W  L++AC  + + Q    + E ++    QP   +   +LS
Sbjct: 552 EKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLIS--LQPQDSAAYVLLS 608



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 186/346 (53%), Gaps = 6/346 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +++ Y KS  ++ A+ +F+SM +R AVSW  +I G+       EAF+LF  MR +G  
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVK 291

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
               + FAT++  C+     +   Q+H  +IK G +  L I  +L+ +Y K   +D A +
Sbjct: 292 LTQTI-FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 130 VFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSA-GVG 186
           +F  M   ++ VS+ A+I+G+ + G  + A+ LF +M+   G +P++FTF++ L+A    
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAP 410

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            A +  G+Q H+  +K+ F   + V++AL+ +Y+K   +  A ++F    + D VS+N M
Sbjct: 411 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSM 470

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ YA +   K+SLK+F E++    +     F  ++S   +   +  G++     +    
Sbjct: 471 ISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH 530

Query: 307 I-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           I   ++  + +VD+Y++ G  E+A ++   +   +    W  +++A
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L++ Y K GN+ +A E+F   VDR  VSW  +I GY+Q    +++ K+F +MR+   
Sbjct: 436 SSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSK-N 494

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII--CNSLVDSYCKIRCLDL 126
            + D +TF  ++S C+     NE  Q + D++   Y+ +  +   + +VD Y +   L+ 
Sbjct: 495 LELDGITFIGVISACTHAGLVNEG-QRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEK 553

Query: 127 ARRVFKEMP 135
           A  +  +MP
Sbjct: 554 AMDLINKMP 562


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/741 (39%), Positives = 446/741 (60%), Gaps = 31/741 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ YVKS  L  A +LF+ M +R  +S+  LI GY++  +F EA +LFV +  +G  
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHE 136

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +V F T+L      D       +HA I K G+ S   +  +L+D+Y     +D+AR 
Sbjct: 137 LNPFV-FTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVARE 195

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  KD VS+  ++T FA+    +EA+KLF +M+ +GFKP++FTFA+   A +GL  
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEA 255

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G+ VH   +K+ +  +++V  ALLDLY+K   + +AR  F E+P+ D + ++ MI  
Sbjct: 256 FDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIAR 315

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA ++Q KE++++F +++      +QF F+++L   A    L +G QIH   I     S+
Sbjct: 316 YAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 375

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTV-PWTAMISAYVQKGNLEEALNLFIEMC 368
           V V+N+L+D+YAKCGR E +  +FA   H + V PW  +I  +VQ G+ E+AL LF+ M 
Sbjct: 376 VFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNML 435

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              + A + T++S LRA A LA+L  G Q+HS  +++ F  ++   +AL+DMYAK GS+K
Sbjct: 436 EYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIK 495

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F  M +++ VSWNA+IS  + +G                             AC+
Sbjct: 496 DARLVFDLMNKQDEVSWNAMISGYSMHG----------------------------LACA 527

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           + GL+++G  YF SM Q + + P  EHY  MV +L R G  D+A KL+ ++PF+P  ++W
Sbjct: 528 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVW 587

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C IH ++E  + +A  + +ME  +D A +V +SN+YA A +W++V+ V+K M+ 
Sbjct: 588 RALLGACVIHNDIELGRISAQHVLEMEP-QDKATHVLLSNMYATAKRWDNVASVRKNMKR 646

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +GV+K    SW+E +  VH FT  D  HP+   I   +E L  + KK GY P+ +  L D
Sbjct: 647 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLD 706

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            ++E K   L  HSERLA++F +I TP GSPI +MKNLR C DCHAAIK ISK+  REI 
Sbjct: 707 VEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIV 766

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD +RFHHF++G CSC D+W
Sbjct: 767 VRDINRFHHFQEGLCSCGDYW 787



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/484 (31%), Positives = 261/484 (53%), Gaps = 3/484 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A  L  C + D  +    +H +I+K G    L   N L++ Y K   L  A ++F EMP
Sbjct: 41  YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++++SF  LI G+A+     EAI+LFV +   G + + F F   L   V +    LG  
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWG 160

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA + K     N FV  AL+D YS    V  AR++F  +   D VS+  M+TC+A N+ 
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDC 220

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           +KE+LKLF +++   F  + F F+++           +G+ +H   + +    ++ V  +
Sbjct: 221 FKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y K G  ++A+  F  +     +PW+ MI+ Y Q    +EA+ +F +M +A +  +
Sbjct: 281 LLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q TFAS+L+A A +  L+LG Q+H  VI+ G  S+VF  +AL+D+YAK G +++++  F 
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFA 400

Query: 436 EMPERN-IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           E P RN +  WN +I    Q GD +  L+ F +M++   Q   V+  S L AC+    +E
Sbjct: 401 ESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALE 460

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            GLQ  +S+T K           +++D+  + G   +A +L+  +  + DE+ W+++I+ 
Sbjct: 461 PGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISG 518

Query: 555 CRIH 558
             +H
Sbjct: 519 YSMH 522



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYS-------QKNQFRE 55
           +++ V TN LI  Y K G++  AR +F+ M  +  VSW  +I GYS             +
Sbjct: 475 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQ 534

Query: 56  AFKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELI 93
               F  M  D G +P    Y     LL      D A +LI
Sbjct: 535 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLI 575


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/742 (38%), Positives = 440/742 (59%), Gaps = 3/742 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +FN    +R AVSW  L+  Y + +Q  +A ++F +M    
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM-VWS 196

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P    F+ +++ C+         QVHA +++ GY+  +   N+LVD Y K+  +D+A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F++MP  D VS+NALI+G    G +  AI+L ++M++ G  P+ FT ++ L A  G 
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               LGRQ+H F++K N   + ++   L+D+Y+K+  + +ARK+F  M   D +  N +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +   ++ E+L LF EL+      ++   + +L   A+       RQ+H   +    I
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N L+D Y KC    +A  +F   S    +  T+MI+A  Q  + E A+ LF+EM
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +  D    +S+L A A L++   GKQ+H+ +I+  FMS+ F+G+AL+  YAK GS+
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +PER +VSW+A+I   AQ+G  +  L+ F  MV  G  P+ +++ SVL AC
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL++E  +YFNSM + + +   +EHY+ M+D+L R+G  D+A +L+  MPF+ +  +
Sbjct: 617 NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASI 676

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ + R+HK+ E  K AA++LF +E  + +  +V ++N YA AG W  V++V+K M+
Sbjct: 677 WGALLGASRVHKDPELGKLAAEKLFILEPEK-SGTHVLLANTYASAGMWNEVAKVRKLMK 735

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +  ++K  A SW+E+K KVH F   D+ HP T EI  K+  L   M K G+ P+    LH
Sbjct: 736 DSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLH 795

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D D   K   L +HSERLA+AFAL++TP G+PI V KNLR C DCH A K ISKI  REI
Sbjct: 796 DLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREI 855

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+DG CSC D+W
Sbjct: 856 IIRDINRFHHFRDGTCSCGDYW 877



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/602 (28%), Positives = 283/602 (47%), Gaps = 55/602 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +HA ++K G  S+    N L+  Y K R    ARR F E+P    VS+++L+T ++  G
Sbjct: 25  HLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNG 82

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L   AI+ F  M+  G   ++F     L     + D  LG QVHA  + T F  +VFVAN
Sbjct: 83  LPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVAN 139

Query: 214 ALLDLYSKHDCVVEARKLFGEM-PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           AL+ +Y     + +AR++F E   E + VS+N +++ Y  N+Q  +++++F E+ ++   
Sbjct: 140 ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F FS +++      +++ GRQ+H   +      +V  AN+LVDMY K GR + A  I
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +     V W A+IS  V  G+   A+ L ++M  + +  +  T +SIL+A +   + 
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG+Q+H F+I++   S+ + G  L+DMYAK+  L DA + F  M  R+++  NALIS C
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY-- 499
           +  G     L  F ++ + G   +  +L +VL + +           H   ++ G  +  
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439

Query: 500 --FNSMTQKYK----LRPKKEHY-----------ASMVDILCRSGCFDEAEKLMAQM--- 539
              N +   Y     L      +            SM+  L +    + A KL  +M   
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  + SS++N+C      E  K+    L K + + DA    A+   YA  G  E  
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDA 559

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
                ++ ERGV      SW  +   +           Q    +R +E L   M  EG  
Sbjct: 560 ELAFSSLPERGV-----VSWSAMIGGL----------AQHGHGKRALE-LFGRMVDEGIN 603

Query: 660 PD 661
           P+
Sbjct: 604 PN 605



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 223/459 (48%), Gaps = 3/459 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++  + N L+  Y+K G +  A  +F  M D   VSW  LI G         A +L + 
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+  G   P+  T +++L  CS     +   Q+H  +IK   +S   I   LVD Y K  
Sbjct: 294 MKYSGLV-PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            LD AR+VF  M  +D +  NALI+G +  G ++EA+ LF E++  G   +  T AA L 
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L   +  RQVHA  VK  F+ +  V N L+D Y K  C+ +A ++F E    D ++
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              MIT  +  +  + ++KLF E+     +   F  S+LL+  A+    + G+Q+H   I
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +S+    N+LV  YAKCG  E+A+  F++L     V W+AMI    Q G+ + AL 
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF  M    I+ +  T  S+L A      +   K+  +S     G        S ++D+ 
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            ++G L DA++    MP + N   W AL+ A   + D +
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPE 691


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/742 (38%), Positives = 440/742 (59%), Gaps = 3/742 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +FN    +R AVSW  L+  Y + +Q  +A ++F +M    
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM-VWS 196

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P    F+ +++ C+         QVHA +++ GY+  +   N+LVD Y K+  +D+A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F++MP  D VS+NALI+G    G +  AI+L ++M++ G  P+ FT ++ L A  G 
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               LGRQ+H F++K N   + ++   L+D+Y+K+  + +ARK+F  M   D +  N +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +   ++ E+L LF EL+      ++   + +L   A+       RQ+H   +    I
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI 436

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N L+D Y KC    +A  +F   S    +  T+MI+A  Q  + E A+ LF+EM
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEM 496

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +  D    +S+L A A L++   GKQ+H+ +I+  FMS+ F+G+AL+  YAK GS+
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +PER +VSW+A+I   AQ+G  +  L+ F  MV  G  P+ +++ SVL AC
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL++E  +YFNSM + + +   +EHY+ M+D+L R+G  D+A +L+  MPF+ +  +
Sbjct: 617 NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASI 676

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ + R+HK+ E  K AA++LF +E  + +  +V ++N YA AG W  V++V+K M+
Sbjct: 677 WGALLGASRVHKDPELGKLAAEKLFILEPEK-SGTHVLLANTYASAGMWNEVAKVRKLMK 735

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +  ++K  A SW+E+K KVH F   D+ HP T EI  K+  L   M K G+ P+    LH
Sbjct: 736 DSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLH 795

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D D   K   L +HSERLA+AFAL++TP G+PI V KNLR C DCH A K ISKI  REI
Sbjct: 796 DLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREI 855

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+DG CSC D+W
Sbjct: 856 IIRDINRFHHFRDGTCSCGDYW 877



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 284/602 (47%), Gaps = 55/602 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +HA ++K G  S+    N L+  Y K R    ARRVF E+P    VS+++L+T ++  G
Sbjct: 25  HLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNG 82

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L   AI+ F  M+  G   ++F     L     + D  LG QVHA  + T F  +VFVAN
Sbjct: 83  LPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVAN 139

Query: 214 ALLDLYSKHDCVVEARKLFGEM-PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           AL+ +Y     + +AR++F E   E + VS+N +++ Y  N+Q  +++++F E+ ++   
Sbjct: 140 ALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F FS +++      +++ GRQ+H   +      +V  AN+LVDMY K GR + A  I
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +     V W A+IS  V  G+   A+ L ++M  + +  +  T +SIL+A +   + 
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG+Q+H F+I++   S+ + G  L+DMYAK+  L DA + F  M  R+++  NALIS C
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY-- 499
           +  G     L  F ++ + G   +  +L +VL + +           H   ++ G  +  
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439

Query: 500 --FNSMTQKYK----LRPKKEHY-----------ASMVDILCRSGCFDEAEKLMAQM--- 539
              N +   Y     L      +            SM+  L +    + A KL  +M   
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  + SS++N+C      E  K+    L K + + DA    A+   YA  G  E  
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDA 559

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
                ++ ERGV      SW  +   +           Q    +R +E L   M  EG  
Sbjct: 560 ELAFSSLPERGV-----VSWSAMIGGL----------AQHGHGKRALE-LFGRMVDEGIN 603

Query: 660 PD 661
           P+
Sbjct: 604 PN 605



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 223/459 (48%), Gaps = 3/459 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++  + N L+  Y+K G +  A  +F  M D   VSW  LI G         A +L + 
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+   G  P+  T +++L  CS     +   Q+H  +IK   +S   I   LVD Y K  
Sbjct: 294 MKYS-GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 352

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            LD AR+VF  M  +D +  NALI+G +  G ++EA+ LF E++  G   +  T AA L 
Sbjct: 353 FLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLK 412

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L   +  RQVHA  VK  F+ +  V N L+D Y K  C+ +A ++F E    D ++
Sbjct: 413 STASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              MIT  +  +  + ++KLF E+     +   F  S+LL+  A+    + G+Q+H   I
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +S+    N+LV  YAKCG  E+A+  F++L     V W+AMI    Q G+ + AL 
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF  M    I+ +  T  S+L A      +   K+  +S     G        S ++D+ 
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            ++G L DA++    MP + N   W AL+ A   + D +
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPE 691


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 278/744 (37%), Positives = 445/744 (59%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           TV  N LI+ Y++ G+L+ A  +F+ M     V++  LI  ++Q      A ++F +MR 
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL 237

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G + PD VT A+LL+ C+     N+  Q+H+ ++K G +   II  SL+D Y K   + 
Sbjct: 238 SGWT-PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIV 296

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  +FK   + + V +N ++  + +     ++  LF +M   G +P++FT+   L    
Sbjct: 297 EALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCT 356

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              +I LG Q+H   +KT F  +++V+  L+D+YSK+  + +AR++   +   D VS+  
Sbjct: 357 YAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTS 416

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  +E  KE+L+ F+++Q           ++ +S  A    ++ G+QIH++  V+ 
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             ++V + N+LV++YA+CGR +EA  +F  + H   + W  M+S + Q G  EEAL +FI
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A +  +  TF S + ASA LA +  GKQ+H+ VI++G  S     +AL+ +Y K G
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCG 596

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA   F EM ERN VSWN +I++C+Q+G     L  F+ M Q G +P+ V+ + VL+
Sbjct: 597 SIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLA 656

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+EEGL YF SM+ ++ + P+ +HYA +VDIL R+G  D A K + +MP   + 
Sbjct: 657 ACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANA 716

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++CR+HKN+E  + AA  L ++E   D+A YV +SN YAV G+W     V+K 
Sbjct: 717 MVWRTLLSACRVHKNIEIGELAAKYLLELEP-HDSASYVLLSNAYAVTGKWACRDHVRKM 775

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RGVRK    SW+E+K+ VH F   D LHP  ++I + + +L   + K GY       
Sbjct: 776 MKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFL 835

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            H++++E K  +   HSE+LA+AF L++ P   P+ V+KNLR C DCH  +K  S++ GR
Sbjct: 836 FHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGR 895

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD  RFHHF +G CSC DFW
Sbjct: 896 EIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/556 (30%), Positives = 295/556 (53%), Gaps = 3/556 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++ ++ N+LI  Y K G +  AR +F  +  R  VSW  ++ GY++     EA  L+  
Sbjct: 74  GEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQ 133

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M   G     YV  +++LS C++     +   VHA + K G  S  ++ N+L+  Y +  
Sbjct: 134 MHCSGVVPTPYV-LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFG 192

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L LA RVF EMP  D V+FN LI+  A+ G  E A+++F EM+  G+ P   T A+ L+
Sbjct: 193 SLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLA 252

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   + D+  G+Q+H++++K     +  +  +LLDLY K   +VEA ++F      + V 
Sbjct: 253 ACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVL 312

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N+M+  Y       +S  LF ++       ++F +  LL       ++ +G QIH  +I
Sbjct: 313 WNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSI 372

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   S++ V+  L+DMY+K G  ++A+ I   L     V WT+MI+ YVQ    +EAL 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALE 432

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            F +M    I  D    AS + A A + ++  G+Q+HS V  SG+ ++V   +AL+++YA
Sbjct: 433 TFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYA 492

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + G  K+A   F+ +  ++ ++WN ++S  AQ+G  +  L+ F  M Q+G + +  + +S
Sbjct: 493 RCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVS 552

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
            +SA ++   I++G Q  ++   K     + E   +++ +  + G  ++A+    +M  E
Sbjct: 553 SISASANLADIKQGKQ-IHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMS-E 610

Query: 543 PDEIMWSSVINSCRIH 558
            + + W+++I SC  H
Sbjct: 611 RNHVSWNTIITSCSQH 626



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 254/482 (52%), Gaps = 3/482 (0%)

Query: 74  VTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           V FA  L  C        L+ V HA  I  G     I  N L+D Y K   +  ARRVF+
Sbjct: 42  VDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFE 101

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           ++  +D+VS+ A+++G+A+ GL EEA+ L+ +M   G  P+ +  ++ LSA    A    
Sbjct: 102 QLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQ 161

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VHA V K        V NAL+ LY +   +  A ++F EMP  D V++N +I+ +A 
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQ 221

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
               + +L++F E++ + +       ++LL+  A+  DL  G+Q+H+  +      +  +
Sbjct: 222 CGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYII 281

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             SL+D+Y KCG   EA EIF +    + V W  M+ AY Q  +L ++ +LF +M  A +
Sbjct: 282 EGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGV 341

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ T+  +LR       ++LG+Q+H   I++GF S+++    L+DMY+K G L  A +
Sbjct: 342 RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
             + +  +++VSW ++I+   Q+   +  L++F+DM   G  PD++ L S +SAC+    
Sbjct: 402 ILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKA 461

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + +G Q  +S             + ++V++  R G   EA  L   +  + D+I W+ ++
Sbjct: 462 MRQG-QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMV 519

Query: 553 NS 554
           + 
Sbjct: 520 SG 521



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 49/254 (19%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + +++ ++ N ++SG+ +SG                                + EA ++F
Sbjct: 507 IEHKDKITWNGMVSGFAQSG-------------------------------LYEEALEVF 535

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M    G   +  TF + +S  +      +  Q+HA +IK G  S   + N+L+  Y K
Sbjct: 536 IKM-YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGK 594

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+  F EM +++ VS+N +IT  ++ G   EA+ LF +M+  G KP+D TF   
Sbjct: 595 CGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGV 654

Query: 181 LSA--GVGLADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           L+A   VGL +  LG        H    + +    V      +D+  +   +  ARK   
Sbjct: 655 LAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACV------VDILGRAGQLDRARKFVE 708

Query: 234 EMPEVDGVSYNVMI 247
           EMP    VS N M+
Sbjct: 709 EMP----VSANAMV 718


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/753 (37%), Positives = 452/753 (60%), Gaps = 14/753 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-----SQKNQFREAFKLFVDM 63
           +N L++ Y K G+L++AR++F++  +R  V+W  ++G Y     S     +E   LF  +
Sbjct: 115 SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 174

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R   GS    +T A +L  C           VH   IK G    + +  +LV+ Y K   
Sbjct: 175 RASLGSTT-RMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGR 233

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  AR +F  M ++D V +N ++ G+ + GL +EA +LF E    G +P +F+    L+ 
Sbjct: 234 MRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 293

Query: 184 GV--GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            +  G  D+ LG+QVH   VK+    +V VAN+L+++YSK  C   AR++F +M  +D +
Sbjct: 294 CLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLI 353

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-----LDLQIGRQ 296
           S+N MI+  A +   +ES+ LF +L         F  +++    A K     + L  G+Q
Sbjct: 354 SWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQ 413

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH   I     S++ V + ++DMY KCG    A  +F  +S    V WT+MIS  V  GN
Sbjct: 414 IHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGN 473

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            ++AL ++  M ++ +  D+ TFA++++AS+ + +L  G+QLH+ VI+   +S+ F G++
Sbjct: 474 EDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTS 533

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMYAK G+++DA + FK+M  RNI  WNA++   AQ+G+A+  +  F+ M   G +PD
Sbjct: 534 LVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPD 593

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            VS + +LSACSH GL  E  +Y +SM   Y + P+ EHY+ +VD L R+G   EA+K++
Sbjct: 594 RVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVI 653

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MPF+    +  +++ +CRI  ++E  K+ A +LF +E   D+A YV +SNIYA A +W
Sbjct: 654 ETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF-DSAAYVLLSNIYAAANRW 712

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V+  +K M+ + V+K   +SW+++K+ +H+F  +D  HPQ + I  K+E +M+ ++++
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED 772

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT   L D ++E K  SL YHSE+LAIA+ LI+TP  + I V+KNLR C DCH AI
Sbjct: 773 GYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAI 832

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISK+  REI +RD++RFHHF+DG CSC D+W
Sbjct: 833 KYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 253/501 (50%), Gaps = 22/501 (4%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA----- 150
           HA I+  G      + N+L+  Y K   L  AR+VF   P++D V++NA++  +A     
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 159

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
            +G  +E + LF  ++      +  T A  L   +    +     VH + +K     +VF
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V+ AL+++YSK   + +AR LF  M E D V +N+M+  Y      KE+ +LF E   + 
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279

Query: 271 FDRSQFPFSTLLS--VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
               +F    +L+  + A   DL++G+Q+H   + +   S+V VANSLV+MY+K G    
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYF 339

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A+E+F ++ H+  + W +MIS+  Q    EE++NLFI++    +  D  T ASI  A+A 
Sbjct: 340 AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAA 399

Query: 389 -----LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                L  L  GKQ+H+  I++GF S++   S +LDMY K G + +A   F  +   + V
Sbjct: 400 KACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV 459

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +W ++IS C  NG+    L+ +  M QS   PD  +  +++ A S    +E+G Q   ++
Sbjct: 460 AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 519

Query: 504 TQKYKLRPKKEHY--ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
               KL    + +   S+VD+  + G  ++A +L  +M    +  +W++++     H N 
Sbjct: 520 I---KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNA 575

Query: 562 EFAKKAADQLFKMEKLRDAAP 582
           E     A  LFK  K     P
Sbjct: 576 E----EAVNLFKSMKSHGIEP 592



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 245/528 (46%), Gaps = 65/528 (12%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   +   ++ LG+  HA +V +    + F++N LL +YSK   +  AR++F   PE D 
Sbjct: 84  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 143

Query: 241 VSYNVMITCYAW-----NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           V++N ++  YA      +   +E L LFR L+ +    ++   + +L +  N   L    
Sbjct: 144 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 203

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
            +H   I      +V V+ +LV++Y+KCGR  +A+ +F  +     V W  M+  YVQ G
Sbjct: 204 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 263

Query: 356 NLEEALNLFIEMCRANISADQATFASILRAS--AELASLSLGKQLHSFVIRSGFMSNVFS 413
             +EA  LF E  R+ +  D+ +   IL     A    L LGKQ+H   ++SG  S+V  
Sbjct: 264 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSV 323

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
            ++L++MY+K G    A + F +M   +++SWN++IS+CAQ+   + ++  F D++  G 
Sbjct: 324 ANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383

Query: 474 QPD-----SVSLLSVLSACSHCGLIEEGLQ--------------YFNS------------ 502
           +PD     S++L +   AC    L+++G Q              + NS            
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 443

Query: 503 ----MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSC 555
               +   Y   P    + SM+     +G  D+A ++   M Q    PDE  ++++I + 
Sbjct: 444 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 503

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS--NIYAVAGQWESVSQVKKAMRERGVRK 613
                LE  ++    + K++ + D  P+V  S  ++YA  G  E   ++ K M    VR 
Sbjct: 504 SCVTALEQGRQLHANVIKLDCVSD--PFVGTSLVDMYAKCGNIEDAYRLFKKMN---VRN 558

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           +  ++ + +    H    N E          +  NL + MK  G +PD
Sbjct: 559 IALWNAMLVGLAQH---GNAE----------EAVNLFKSMKSHGIEPD 593



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 11/283 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL    +  +L +G+  H + +V+ +  +  ++N+L+ MY+KCG    A+++F       
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 341 TVPWTAMISAYV-----QKGNLEEALNLFIEMCRANI-SADQATFASILRASAELASLSL 394
            V W A++ AY        GN +E L+LF  + RA++ S  + T A +L+       L  
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWA 201

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            + +H + I+ G   +VF   AL+++Y+K G ++DA   F  M ER++V WN ++    Q
Sbjct: 202 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 261

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL--IEEGLQYFNSMTQKYKLRPK 512
            G  +   + F +  +SG +PD  S+  +L+ C   G   +E G Q  + +  K  L   
Sbjct: 262 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQ-VHGIAVKSGLDSD 320

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
                S+V++  + GC   A ++   M    D I W+S+I+SC
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSC 362



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 15/198 (7%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +LR +    +L LGK  H+ ++ SG   + F  + LL MY+K GSL  A Q F   PER+
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 442 IVSWNALISACA-----QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC--SHCGLIE 494
           +V+WNA++ A A      +G+AQ  L  F  +  S      ++L  VL  C  S C    
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG+  +     K  L        ++V+I  + G   +A  L   M  E D ++W+ ++  
Sbjct: 203 EGVHGY---AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLKG 258

Query: 555 CRIHKNLEFAKKAADQLF 572
             +   LE   K A QLF
Sbjct: 259 -YVQLGLE---KEAFQLF 272


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/743 (38%), Positives = 435/743 (58%), Gaps = 7/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K G+L  AR++F  +  R  VS+  ++G Y+QK   +E   LF  M ++G S
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC--LDLA 127
            PD VT+  LL   + P   +E  ++H   ++ G NS + +  +LV + C +RC  +D A
Sbjct: 227 -PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALV-TMC-VRCGDVDSA 283

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           ++ FK +  +D V +NALI   A+ G N EA + +  M+  G   +  T+ + L+A    
Sbjct: 284 KQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+ +H+ + +     +V + NAL+ +Y++   + +AR+LF  MP+ D +S+N +I
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA  E   E+++L++++Q       +  F  LLS  AN      G+ IH   + +   
Sbjct: 404 AGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S   +AN+L++MY +CG   EA+ +F        + W +MI+ + Q G+ E A  LF EM
Sbjct: 464 SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM 523

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  D  TFAS+L       +L LGKQ+H  +  SG   +V  G+AL++MY + GSL
Sbjct: 524 QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSL 583

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           +DA   F  +  R+++SW A+I  CA  G+    ++ F  M   G++ PD  +  S+LSA
Sbjct: 584 QDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSA 643

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+H GL+ EG Q F+SM  +Y + P  EHY  +V +L R+  F EAE L+ QMPF PD  
Sbjct: 644 CNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAA 703

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +CRIH N+  A+ AA+   K+   R+ A Y+ +SN+YA AG+W+ V+++++ M
Sbjct: 704 VWETLLGACRIHGNIALAEHAANNALKLNA-RNPAVYILLSNVYAAAGRWDDVAKIRRVM 762

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
             RG+RK    SW+E+ + +H F A D  HP+T EI  +++ L  EM++ GY PDT   L
Sbjct: 763 EGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVL 822

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD  +  +  SL  HSERLAIA+ LI TP G+PI + KNLR C DCH A K ISK+ GRE
Sbjct: 823 HDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGRE 882

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I  RDS+RFH FK+G CSC D+W
Sbjct: 883 IIARDSNRFHSFKNGKCSCEDYW 905



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 175/625 (28%), Positives = 312/625 (49%), Gaps = 49/625 (7%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           ++ D  T+  LL  C+      E  ++HA +++ G    + + N L++ Y K R +  A 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VFKEMP++D +S+N+LI+ +A++G  ++A +LF EMQ+ GF P+  T+ + L+A    A
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           ++  G+++H+ ++K  +  +  V N+LL +Y K   +  AR++F  +   D VSYN M+ 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA     KE L LF ++        +  +  LL        L  G++IH  T+     S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +++V  +LV M  +CG  + AK+ F  ++    V + A+I+A  Q G+  EA   +  M 
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              ++ ++ T+ SIL A +   +L  GK +HS +   G  S+V  G+AL+ MYA+ G L 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A + F  MP+R+++SWNA+I+  A+  D    ++ ++ M   G +P  V+ L +LSAC+
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 489 -----------HCGLIEEGLQ----YFNSMTQKYK----LRPKKE-----------HYAS 518
                      H  ++  G++      N++   Y+    L   +             + S
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 519 MVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           M+    + G ++ A KL  +M     EPD I ++SV++ C+  + LE  K+   ++ +  
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              D     A+ N+Y   G  +    V  +++ R V      SW  +     +    D+ 
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV-----MSWTAM-----IGGCADQ- 611

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKP 660
                E  + IE L  +M+ EG++P
Sbjct: 612 ----GEDMKAIE-LFWQMQNEGFRP 631



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 288/550 (52%), Gaps = 9/550 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N+LI+ YVK  ++  A ++F  M  R  +SW  LI  Y+Q+   ++AF+LF +M+ + G
Sbjct: 65  SNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAG 123

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ +T+ ++L+ C  P       ++H+ IIK GY     + NSL+  Y K   L  AR
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  +  +D VS+N ++  +A++   +E + LF +M   G  P   T+   L A    +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+++H   V+     ++ V  AL+ +  +   V  A++ F  + + D V YN +I 
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIA 303

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTT 305
             A   Q+  +++ F +    R D      +T LS++   +    L+ G+ IH+      
Sbjct: 304 ALA---QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S+V++ N+L+ MYA+CG   +A+E+F  +     + W A+I+ Y ++ +  EA+ L+ 
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYK 420

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    +   + TF  +L A A  ++ + GK +H  ++RSG  SN    +AL++MY + G
Sbjct: 421 QMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG 480

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL +A   F+    R+++SWN++I+  AQ+G  +   K F++M     +PD+++  SVLS
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            C +   +E G Q    +T+   L+       +++++  R G   +A  +   +    D 
Sbjct: 541 GCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DV 598

Query: 546 IMWSSVINSC 555
           + W+++I  C
Sbjct: 599 MSWTAMIGGC 608


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 285/741 (38%), Positives = 444/741 (59%), Gaps = 9/741 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K  N    R++F+ M +R  V+WT LI GY++ +   E   LF+ M+ +G + P
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQP 192

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA  L   +E       +QVH  ++K G +  + + NSL++ Y K   +  AR +F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +   K  V++N++I+G+A  GL+ EA+ +F  M+    + S+ +FA+ +     L ++ 
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
              Q+H  VVK  F+ +  +  AL+  YSK   +++A +LF E+  V  V S+  MI+ +
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N+  +E++ LF E++      ++F +S +L+     L +    ++H Q + T      
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSS 428

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+D Y K G+ EEA ++F+ +     V W+AM++ Y Q G  E A+ +F E+ + 
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488

Query: 371 NISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I  ++ TF+SIL   A   AS+  GKQ H F I+S   S++   SALL MYAK G+++ 
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + FK   E+++VSWN++IS  AQ+G A   L  F++M +   + D V+ + V +AC+H
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YF+ M +  K+ P KEH + MVD+  R+G  ++A K++  MP      +W 
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HK  E  + AA+++  M K  D+A YV +SN+YA +G W+  ++V+K M ER
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAM-KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K   YSW+E+K+K + F A D  HP  ++I  K+E+L   +K  GY+PDTS  L D 
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K   L  HSERLAIAF LI TP+GSP+L++KNLR C DCH  IKLI+KI  REI V
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847

Query: 730 RDSSRFHHF-KDGFCSCRDFW 749
           RDS+RFHHF  DG CSC DFW
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 238/453 (52%), Gaps = 19/453 (4%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y+K GN+  AR LF+    ++ V+W  +I GY+      EA  +F  MR    
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL--- 288

Query: 69  SDPDYV-----TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              +YV     +FA+++  C+         Q+H  ++K+G+     I  +L+ +Y K   
Sbjct: 289 ---NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345

Query: 124 LDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           +  A R+FKE+    + VS+ A+I+GF +    EEA+ LF EM+  G +P++FT++  L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      +    +VHA VVKTN+  +  V  ALLD Y K   V EA K+F  + + D V+
Sbjct: 406 A----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQIGRQIHTQT 301
           ++ M+  YA   + + ++K+F EL       ++F FS++L+V  A    +  G+Q H   
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I +   S + V+++L+ MYAK G  E A+E+F        V W +MIS Y Q G   +AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDM 420
           ++F EM +  +  D  TF  +  A      +  G++    ++R   ++      S ++D+
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641

Query: 421 YAKSGSLKDAIQTFKEMPE-RNIVSWNALISAC 452
           Y+++G L+ A++  + MP       W  +++AC
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 263/553 (47%), Gaps = 72/553 (13%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  +F + P +D  S+ +L+ GF+++G  +EA +LF+ +  LG +     F++ L     
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D   GRQ+H   +K  F+++V V  +L+D Y K     + RK+F EM E + V++  +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ YA N    E L LF  +Q      + F F+  L V+A +     G Q+HT  +    
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              + V+NSL+++Y KCG   +A+ +F      S V W +MIS Y   G   EAL +F  
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +   +++FAS+++  A L  L   +QLH  V++ GF+ +    +AL+  Y+K  +
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + DA++ FKE+    N+VSW A+IS   QN   +  +  F +M + G +P+  +   +L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 486 ACS-------------------------------HCGLIEEGLQYFNSMTQKYKLRPKKE 514
           A                                   G +EE  + F+ +  K  +     
Sbjct: 406 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV----- 460

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC---------------- 555
            +++M+    ++G  + A K+  ++     +P+E  +SS++N C                
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520

Query: 556 ----RIHKNL--------EFAKK----AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
               R+  +L         +AKK    +A+++FK ++ +D   + +M + YA  GQ    
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580

Query: 600 SQVKKAMRERGVR 612
             V K M++R V+
Sbjct: 581 LDVFKEMKKRKVK 593



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 202/468 (43%), Gaps = 54/468 (11%)

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A  LF + P  D  SY  ++  ++ + + +E+ +LF  +     +     FS++L V A 
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             D   GRQ+H Q I    + +V V  SLVD Y K   F++ +++F  +   + V WT +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           IS Y +    +E L LF+ M       +  TFA+ L   AE      G Q+H+ V+++G 
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
              +   ++L+++Y K G+++ A   F +   +++V+WN++IS  A NG     L  F  
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285

Query: 468 MVQSGYQPDSVSLLSVLSACS-----------HCGLIEEG------------LQYFNSMT 504
           M  +  +    S  SV+  C+           HC +++ G            + Y     
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345

Query: 505 QKYKLRPKKE--------HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVIN 553
               LR  KE         + +M+    ++   +EA  L ++M      P+E  +S ++ 
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +  +    E       Q+ K    R +    A+ + Y   G+ E  ++V   + ++ +  
Sbjct: 406 ALPVISPSEVHA----QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI-- 459

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
               +W  + +           + QT E    I+ +  E+ K G KP+
Sbjct: 460 ---VAWSAMLAG----------YAQTGETEAAIK-MFGELTKGGIKPN 493


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/746 (37%), Positives = 441/746 (59%), Gaps = 8/746 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMV----DRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           N L++ Y   G +  AR +F+  V    +R AVSW  +I  Y + +Q  +A  +F +M  
Sbjct: 139 NALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM-V 197

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G  P+   F+ +++ C+         QVH  +++ GY   +   N+LVD Y K+  ++
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIE 257

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +A  VF++MP  D VS+NA I+G    G +  A++L ++M+  G  P+ FT ++ L A  
Sbjct: 258 MAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACA 317

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           G     LGRQ+H F+VK     + FVA  L+D+Y+KH  + +ARK+F  MP  D + +N 
Sbjct: 318 GAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNA 377

Query: 246 MITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           +I+  + + ++ E L LF  +  +    D ++   +++L   A+   +   RQ+H     
Sbjct: 378 LISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEK 437

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              +S+  V N L+D Y KCG+ + A ++F        +  T M++A  Q  + E+A+ L
Sbjct: 438 IGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKL 497

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F++M R  +  D    +S+L A   L++   GKQ+H+ +I+  F S+VF+G+AL+  YAK
Sbjct: 498 FVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAK 557

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            GS++DA   F  +PER IVSW+A+I   AQ+G  +  L  F  M+  G  P+ ++L SV
Sbjct: 558 CGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSV 617

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSAC+H GL+++  +YF SM + + +   +EHYA M+DIL R+G  ++A +L+  MPF+ 
Sbjct: 618 LSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQA 677

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +  +W +++ + R+H++ E  + AA++LF +E  + +  +V ++N YA AG W+ +++V+
Sbjct: 678 NAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEK-SGTHVLLANTYASAGMWDEMAKVR 736

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M++  V+K  A SWVE+K KVH F   D+ HP T +I  K+  L   M K GY P+  
Sbjct: 737 KLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVE 796

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD D   K   L +HSERLA+AFALI+TP G+PI V KNLR C DCH A K ISKI 
Sbjct: 797 VDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIV 856

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI +RD +RFHHF +G CSC D+W
Sbjct: 857 SREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 180/607 (29%), Positives = 284/607 (46%), Gaps = 60/607 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +H+ ++K G   +    N L+  Y + R    AR VF E+P    VS+++L+T ++  G
Sbjct: 25  HLHSHLLKSGL--LAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNG 82

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           +  +A+  F  M+  G   ++F     L       D+  G QVHA  V T  V +VFVAN
Sbjct: 83  MPRDALLAFRAMRGRGVPCNEFALPVVLKCA---PDVRFGAQVHALAVATRLVHDVFVAN 139

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDG----VSYNVMITCYAWNEQYKESLKLFRELQFT 269
           AL+ +Y     V EAR++F E   V G    VS+N MI+ Y  N+Q  +++ +FRE+ ++
Sbjct: 140 ALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWS 199

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               ++F FS +++      DL+ GRQ+H   + T    +V  AN+LVDMY+K G  E A
Sbjct: 200 GERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMA 259

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +     V W A IS  V  G+   AL L ++M  + +  +  T +S+L+A A  
Sbjct: 260 ATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGA 319

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            + +LG+Q+H F++++    + F    L+DMYAK G L DA + F  MP R+++ WNALI
Sbjct: 320 GAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALI 379

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPD--SVSLLSVLSACS----------------HCG 491
           S C+ +G     L  F  M + G   D    +L SVL + +                  G
Sbjct: 380 SGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIG 439

Query: 492 LIEE-----GL--QYFNSMTQKYKLRPKKEHYA-------SMVDILCRSGCFDEAEKLMA 537
           L+ +     GL   Y+      Y ++  KE  +       +M+  L +    ++A KL  
Sbjct: 440 LLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFV 499

Query: 538 QM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           QM     EPD  + SS++N+C      E  K+    L K +   D     A+   YA  G
Sbjct: 500 QMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCG 559

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
             E        + ERG+      SW  +   +           Q    +R ++ L   M 
Sbjct: 560 SIEDADMAFSGLPERGI-----VSWSAMIGGL----------AQHGHGKRALD-LFHRML 603

Query: 655 KEGYKPD 661
            EG  P+
Sbjct: 604 DEGVAPN 610



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 54/320 (16%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T  S L       SL  G  LHS +++SG ++  FS + LL +Y++      A   F E+
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG-FS-NHLLTLYSRCRLPSAARAVFDEI 63

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ-------------PD-----SVS 479
           P+   VSW++L++A + NG  +  L +F  M   G               PD      V 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVH 123

Query: 480 LLSVLSACSH--------------CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            L+V +   H               G+++E  + F+        R     + +M+    +
Sbjct: 124 ALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGER-NAVSWNTMISAYVK 182

Query: 526 SGCFDEAEKLMAQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +    +A  +  +M +    P+E  +S V+N+C   ++LE  ++    + +    +D   
Sbjct: 183 NDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT 242

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
             A+ ++Y+  G  E  + V + M    V      SW       + F +    H   +  
Sbjct: 243 ANALVDMYSKLGDIEMAATVFEKMPAADV-----VSW-------NAFISGCVTHGHDH-- 288

Query: 643 RRKIENLMQEMKKEGYKPDT 662
            R +E L+Q MK  G  P+ 
Sbjct: 289 -RALELLLQ-MKSSGLVPNV 306


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/718 (38%), Positives = 440/718 (61%), Gaps = 2/718 (0%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M DR  VS+  LI GY Q  Q  E   LF  +  +G     +V F T+L      + A  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFV-FTTILKLLVSVECAEL 59

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              +HA I K G+ S   +  +L+D+Y     ++ AR+ F  +  KD VS+  ++  +A+
Sbjct: 60  AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               +++++LF EM+ +GF P+ FTFA  L A +GL   ++G+ VH  V+KT +  +++V
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
              LLDLY+K     +  ++F EMP+ D + ++ MI+ YA + Q +E+++LF +++    
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
             +QF F+++L   A+  +LQ+G+Q+H   +       V V+N+L+D+YAKCGR + + +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  L + + V W  MI  YVQ G+ ++AL+L+  M    + A + T++S+LRA A LA+
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           + LG Q+HS  +++ +  +V  G+AL+DMYAK GS+K+A   F  + ER+ +SWNA+IS 
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            + +G     LK+F+ M ++   P+ ++ +S+LSACS+ GL++ G  YF SM Q Y + P
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEP 479

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
             EHY  MV +L RSG  D+A KL+ ++P EP+  +W +++ +C IH +++    +A Q+
Sbjct: 480 CMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQI 539

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
            +++  +D A +V +SNIYA   +W SV+ V+K M+ +GV+K    SW+E +  VH F+ 
Sbjct: 540 LQIDP-QDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D  HP    I   +E L  + +K GY PD +  L D +++ K   L  HSERLA+AF L
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I TP    I ++KNLR CTDCH+AIKLISKI  R+I +RD +RFHHF+DG CSC D+W
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 261/479 (54%), Gaps = 3/479 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N      LI  Y   G++ +AR+ F+++  +  VSWT ++  Y++ ++F+++ +LF +MR
Sbjct: 75  NAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMR 134

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G +P++ TFA +L  C   +  +    VH  ++K  Y   L +   L+D Y K    
Sbjct: 135 M-VGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDA 193

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           +   RVF+EMP+ D + ++ +I+ +A+   + EA++LF +M+     P+ FTFA+ L + 
Sbjct: 194 NDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSC 253

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             + ++ LG+QVH  V+K     NVFV+NAL+D+Y+K   +  + KLF E+P  + V++N
Sbjct: 254 ASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN 313

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  +    ++L L++ +   +   S+  +S++L   A+   +++G QIH+ ++ T
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT 373

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +V V N+L+DMYAKCG  + A+ +F  LS    + W AMIS Y   G + EAL  F
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF 433

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
             M       ++ TF SIL A +    L +G+    S V   G    +   + ++ +  +
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGR 493

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           SG L  A++  +E+P E N+  W AL+ AC  + D    + S + ++Q   Q ++  +L
Sbjct: 494 SGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVL 552



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 176/360 (48%), Gaps = 34/360 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + +  + +IS Y +S     A ELF                      Q R AF L 
Sbjct: 203 MPKHDVIPWSFMISRYAQSNQSREAVELF---------------------GQMRRAFVL- 240

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     P+  TFA++L  C+  +      QVH  ++K G +  + + N+L+D Y K
Sbjct: 241 ----------PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAK 290

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD + ++F E+P ++ V++N +I G+ + G  ++A+ L+  M     + S+ T+++ 
Sbjct: 291 CGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSV 350

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   LA + LG Q+H+  +KT + ++V V NAL+D+Y+K   +  AR +F  + E D 
Sbjct: 351 LRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDE 410

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+N MI+ Y+ +    E+LK F+ +Q T    ++  F ++LS  +N   L IG+     
Sbjct: 411 ISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKS 470

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
            +    I   ++    +V +  + G  ++A ++   +     V  W A++ A V   +++
Sbjct: 471 MVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVD 530



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 34/191 (17%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ V  N LI  Y K G++  AR +F+ + +R  +SW  +I GYS      EA K F  
Sbjct: 376 DKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF-Q 434

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +    P+ +TF ++LS CS           +A ++  G N       S+V  Y    
Sbjct: 435 MMQETECVPNKLTFVSILSACS-----------NAGLLDIGQNYF----KSMVQDYGIEP 479

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C++                +  ++    + G  ++A+KL  E+     +P+   + A L 
Sbjct: 480 CME---------------HYTCMVWLLGRSGHLDKAVKLIEEIP---LEPNVKVWRALLG 521

Query: 183 AGVGLADIALG 193
           A V   D+ LG
Sbjct: 522 ACVIHNDVDLG 532


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/738 (36%), Positives = 439/738 (59%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ ++K G +  A ++FN++  R  ++WT +I G ++  QF++A  LF  M  +G   P
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEG-VQP 304

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V F +LL  C+ P+   +  +VHA + + G ++ + +  +L+  Y K   ++ A  VF
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +  ++ VS+ A+I GFA+ G  EEA   F +M   G +P+  TF + L A    + + 
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GRQ+H  ++K  ++ +  V  ALL +Y+K   +++AR +F  + + + V++N MIT Y 
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYV 484

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +E+Y  ++  F+ L           F+++L+V  +   L++G+ + +  I     S++ 
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH 544

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+LV M+  CG    A  +F ++     V W  +I+ +VQ G  + A + F  M  + 
Sbjct: 545 IRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG 604

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  DQ TF  +L A A   +L+ G++LH+ +  +    +V  G+ L+ MY K GS+ DA 
Sbjct: 605 VKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAH 664

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +P++N+ SW ++I+  AQ+G  +  L+ F  M Q G +PD ++ +  LSAC+H G
Sbjct: 665 LVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAG 724

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LI+EGL +F SM + + + P+ EHY  MVD+  R+G   EA + + +M  +PD  +W ++
Sbjct: 725 LIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGAL 783

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C++H ++E A+K A +  +++   D   YV +SNIYA AG W+ V++++K M +RGV
Sbjct: 784 LGACQVHLDVELAEKVAQKKLELDP-NDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGV 842

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            K    SW+E+  +VH+F ++D+ HPQ  EI  ++  L  EMKK GY PDT   LHD ++
Sbjct: 843 VKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVED 902

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K  +L +HSERLAIA+ L+ TP  +PI++ KNLR C DCH A KLISKIT R+I  RD
Sbjct: 903 SEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARD 962

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFHHFKDG CSC DFW
Sbjct: 963 SNRFHHFKDGVCSCGDFW 980



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 299/549 (54%), Gaps = 3/549 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           NMLIS Y K GN  +A+++F+ M D+   SW +L+GGY Q  ++ EAF+L   M  DG  
Sbjct: 143 NMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG-V 201

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L+ C++    ++  ++ + I+  G+++ L +  +L++ + K   +D A +
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALK 261

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +P++D +++ ++ITG A+    ++A  LF  M+  G +P    F + L A      
Sbjct: 262 VFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G++VHA + +      ++V  ALL +Y+K   + +A ++F  +   + VS+  MI  
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A + + +E+   F ++  +  + ++  F ++L   +    L+ GRQIH + I    I++
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            +V  +L+ MYAKCG   +A+ +F  +S  + V W AMI+AYVQ    + A+  F  + +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  D +TF SIL       +L LGK + S +IR+GF S++   +AL+ M+   G L  
Sbjct: 502 EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMS 561

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A+  F +MPER++VSWN +I+   Q+G+ Q     F+ M +SG +PD ++   +L+AC+ 
Sbjct: 562 AMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACAS 621

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              + EG +  +++  +  L         ++ +  + G  D+A  +   +P + +   W+
Sbjct: 622 PEALTEG-RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWT 679

Query: 550 SVINSCRIH 558
           S+I     H
Sbjct: 680 SMITGYAQH 688



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 259/490 (52%), Gaps = 2/490 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T+++LL  C +     +  ++H  I        + + N L+  Y K    + A+++F EM
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P KD  S+N L+ G+ +    EEA +L  +M   G KP  +TF   L+A     ++  G 
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++ + ++   +  ++FV  AL++++ K   V +A K+F  +P  D +++  MIT  A + 
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           Q+K++  LF+ ++       +  F +LL    +   L+ G+++H +       +E+ V  
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +L+ MY KCG  E+A E+F  +   + V WTAMI+ + Q G +EEA   F +M  + I  
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           ++ TF SIL A +  ++L  G+Q+H  +I++G++++    +ALL MYAK GSL DA   F
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVF 465

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + + ++N+V+WNA+I+A  Q+      + +F+ +++ G +PDS +  S+L+ C     +E
Sbjct: 466 ERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALE 525

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G ++  S+  +           ++V +    G    A  L   MP E D + W+++I  
Sbjct: 526 LG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAG 583

Query: 555 CRIHKNLEFA 564
              H   +FA
Sbjct: 584 FVQHGENQFA 593



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 236/453 (52%), Gaps = 2/453 (0%)

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K++   NA +   +K G   EA+ + + +     +    T+++ L   +   ++  G ++
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  +  +    ++F+ N L+ +Y+K      A+++F EMP+ D  S+N+++  Y  + +Y
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           +E+ +L  ++        ++ F  +L+  A+  ++  G ++ +  +     +++ V  +L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           ++M+ KCG  ++A ++F NL     + WT+MI+   +    ++A NLF  M    +  D+
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
             F S+L+A     +L  GK++H+ +   G  + ++ G+ALL MY K GS++DA++ F  
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  RN+VSW A+I+  AQ+G  +     F  M++SG +P+ V+ +S+L ACS    +++G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            Q  + + +   +   +   A ++ +  + G   +A  +  ++  + + + W+++I +  
Sbjct: 427 RQIHDRIIKAGYITDDRVRTA-LLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYV 484

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            H+  + A      L K     D++ + ++ N+
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNV 517



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 32/235 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I+G+V+ G                             +NQF  AF  F
Sbjct: 569 MPERDLVSWNTIIAGFVQHG-----------------------------ENQF--AFDYF 597

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  PD +TF  LL+ C+ P+   E  ++HA I +   +  +++   L+  Y K
Sbjct: 598 -KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTK 656

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A  VF  +P+K+  S+ ++ITG+A+ G  +EA++LF +MQ  G KP   TF  A
Sbjct: 657 CGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGA 716

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           LSA      I  G      +   N    +     ++DL+ +   + EA +   +M
Sbjct: 717 LSACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKM 771


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/742 (37%), Positives = 455/742 (61%), Gaps = 2/742 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N+L++ YV+S +L  A +LF+ M     +S+  L  GYS+ +QF +A    + +  +G
Sbjct: 72  AQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEG 131

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                +V F TLL      D A+    +HA + K G+++   +  +L+D+Y     +D+A
Sbjct: 132 HEVNPFV-FTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVA 190

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF ++  KD VS+  ++  +A+    EE+++LF +M+ +G+KP++FT + AL + +GL
Sbjct: 191 RHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGL 250

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               +G+ VH   +K  +  ++FV  ALL+LY+K   +++A++LF EMP+ D + +++MI
Sbjct: 251 EAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMI 310

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA +++ KE+L LF  ++ T    + F F+++L   A+ + L +G+QIH+  +     
Sbjct: 311 ARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLN 370

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S V V+N+++D+YAKCG  E + ++F  L   + V W  +I  YVQ G+ E A+NLF  M
Sbjct: 371 SNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHM 430

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              ++   + T++S+LRASA LA+L  G Q+HS  I++ +  +    ++L+DMYAK G +
Sbjct: 431 LEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRI 490

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA  TF +M +R+ VSWNA+I   + +G +   L  F+ M  +  +P+ ++ + VLSAC
Sbjct: 491 NDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC 550

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S+ GL+ +G  +F SM++ Y ++P  EHY  MV +L R G FDEA KL+ ++ ++P  ++
Sbjct: 551 SNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMV 610

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C IHK ++  +  A  + +ME   D A +V +SN+YA AG+W++V+ V+K M+
Sbjct: 611 WRALLGACVIHKKVDLGRVCAQHVLEMEP-HDDATHVLLSNMYATAGRWDNVAFVRKYMQ 669

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           ++ VRK    SWVE +  VH F+  D  HP    I   +E L ++ +  GY PD +  L 
Sbjct: 670 KKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLL 729

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D  ++ K   L  HSERLA+A+ LI TP    I ++KNLR C DCH  +KLISK+  REI
Sbjct: 730 DVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREI 789

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+ G CSC D+W
Sbjct: 790 VIRDINRFHHFRHGVCSCGDYW 811



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 255/489 (52%), Gaps = 6/489 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +H  I+K G +  L   N L++ Y +   L  A ++F EMPQ +++SF  L  G++++ 
Sbjct: 56  HLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDH 115

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              +A+   + +   G + + F F   L   V +    L   +HA V K     + FV  
Sbjct: 116 QFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGT 175

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+D YS    V  AR +F ++   D VS+  M+ CYA N  Y+ESL+LF +++   +  
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP 235

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           + F  S  L          +G+ +H   +      ++ V  +L+++YAK G   +A+ +F
Sbjct: 236 NNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +     +PW+ MI+ Y Q    +EAL+LF+ M + ++  +  TFAS+L+A A   SL 
Sbjct: 296 EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLD 355

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LGKQ+HS V++ G  SNVF  +A++D+YAK G ++++++ F+E+P+RN V+WN +I    
Sbjct: 356 LGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYV 415

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           Q GD +  +  F  M++   QP  V+  SVL A +    +E GLQ  +S+T K       
Sbjct: 416 QLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ-IHSLTIKTMYNKDT 474

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
               S++D+  + G  ++A     +M  + DE+ W+++I    +H         A  LF 
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG----MSMEALNLFD 529

Query: 574 MEKLRDAAP 582
           M +  D  P
Sbjct: 530 MMQHTDCKP 538



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 191/365 (52%), Gaps = 2/365 (0%)

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           AD   G+ +H  ++K     ++F  N LL+ Y + + + +A KLF EMP+ + +S+  + 
Sbjct: 49  ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y+ + Q+ ++L     +     + + F F+TLL ++ +     +   +H         
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++  V  +L+D Y+  G  + A+ +F ++     V WT M++ Y +    EE+L LF +M
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQM 228

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
                  +  T +  L++   L + ++GK +H   ++  +  ++F G ALL++YAKSG +
Sbjct: 229 RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEI 288

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA + F+EMP+ +++ W+ +I+  AQ+  ++  L  F  M Q+   P++ +  SVL AC
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    ++ G Q  +S   K+ L        +++D+  + G  + + KL  ++P + +++ 
Sbjct: 349 ASSVSLDLGKQ-IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVT 406

Query: 548 WSSVI 552
           W+++I
Sbjct: 407 WNTII 411



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N   +N ++  Y K G +  + +LF  + DR  V+W  +I GY Q      A  LF  
Sbjct: 370 NSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTH 429

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +    P  VT++++L   +        +Q+H+  IK  YN   ++ NSL+D Y K  
Sbjct: 430 M-LEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCG 488

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ AR  F +M ++D VS+NA+I G++  G++ EA+ LF  MQH   KP+  TF   LS
Sbjct: 489 RINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLS 548

Query: 183 A 183
           A
Sbjct: 549 A 549



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           L  ++ N  D   G+ +H   +      ++   N L++ Y +    ++A ++F  +   +
Sbjct: 41  LQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTN 100

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
           T+ +  +   Y +     +AL+  + + +     +   F ++L+    +    L   LH+
Sbjct: 101 TISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHA 160

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            V + G  ++ F G+AL+D Y+  G++  A   F ++  +++VSW  +++  A+N   + 
Sbjct: 161 CVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEE 220

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN--SMTQKYKLRPKKEH--- 515
           +L+ F  M   GY+P++ ++   L +C        GL+ FN         L+   +H   
Sbjct: 221 SLQLFNQMRIMGYKPNNFTISGALKSCL-------GLEAFNVGKSVHGCALKGCYDHDLF 273

Query: 516 -YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
              +++++  +SG   +A++L  +MP + D I WS +I     +   + +K+A D   +M
Sbjct: 274 VGIALLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIAR---YAQSDRSKEALDLFLRM 329

Query: 575 EK 576
            +
Sbjct: 330 RQ 331



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 79/194 (40%), Gaps = 34/194 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N++TV  N LI  Y K G +  AR  F+ M  R  VSW  +I GYS      EA  LF
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DM       P+ +TF  +LS CS    A  L +  A               S+   Y  
Sbjct: 529 -DMMQHTDCKPNKLTFVGVLSACS---NAGLLYKGQAHF------------ESMSKDYDI 572

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C++                +  ++    + G  +EA+KL  E   + ++PS   + A 
Sbjct: 573 KPCIE---------------HYTCMVWLLGRLGRFDEAMKLIGE---IAYQPSVMVWRAL 614

Query: 181 LSAGVGLADIALGR 194
           L A V    + LGR
Sbjct: 615 LGACVIHKKVDLGR 628


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/744 (37%), Positives = 445/744 (59%), Gaps = 2/744 (0%)

Query: 6    TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            T   N L++ Y +S  L +A  +F++M  R  VS+  LI G  Q+     A +LF  M+ 
Sbjct: 296  TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355

Query: 66   DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            D    PD +T A+LLS C+     ++ +Q+H+  IK G ++ +I+  SL+D Y K   ++
Sbjct: 356  DC-LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414

Query: 126  LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
             A + F     ++ V +N ++  + +     ++ ++F +MQ  G  P+ FT+ + L    
Sbjct: 415  TAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 186  GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             L  + LG Q+H  V+KT F  NV+V + L+D+Y+K+  +  A ++   +PE D VS+  
Sbjct: 475  SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534

Query: 246  MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            MI  Y  ++ + E+L+LF E+++         F++ +S  A    L+ G+QIH Q+    
Sbjct: 535  MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +++ + N+L+ +YA+CGR +EA   F  +   + + W +++S   Q G  EEAL +F+
Sbjct: 595  FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654

Query: 366  EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
             M R     +  T+ S + A+A LA++  G+Q+HS V+++G+ S     ++L+ +YAKSG
Sbjct: 655  RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714

Query: 426  SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            S+ DA + F +M ERN++SWNA+I+  +Q+G     L+ FE+M   G  P+ V+ + VLS
Sbjct: 715  SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774

Query: 486  ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            ACSH GL++EGL YF SM + + L PK EHY  +VD+L R+G  D A + + +MP   D 
Sbjct: 775  ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834

Query: 546  IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            ++W +++++C IHKN+E  ++AA  L ++E   D+A YV +SNIYAV+ QW      +K 
Sbjct: 835  MIWRTLLSACVIHKNIEIGERAAHHLLELEP-EDSATYVLISNIYAVSRQWIHRDWSRKL 893

Query: 606  MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
            M++RGV+K    SW+E+K+ VH F A D+LHP TN+I   I +L +   + GY  D+   
Sbjct: 894  MKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSL 953

Query: 666  LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            L++ ++  K      HSE+LAIAF L++     PI VMKNLR C DCH  IK +SKI+ R
Sbjct: 954  LNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNR 1013

Query: 726  EITVRDSSRFHHFKDGFCSCRDFW 749
             I VRD+ RFHHF  G CSC+DFW
Sbjct: 1014 SIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 315/639 (49%), Gaps = 51/639 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI  Y K+G + +A+++FN +  +  V+W  +I G SQ     EA  LF DM      
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              YV  +++LS  ++        Q+H  +IK+G++S   +CN LV  Y + R L  A R
Sbjct: 259 PTPYV-LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  M  +D VS+N+LI+G  ++G ++ A++LF +MQ    KP   T A+ LSA   +  
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G Q+H+  +K     ++ +  +LLDLYSK   V  A K F      + V +NVM+  
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVA 437

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y   +   +S ++FR++Q      +QF + ++L    +   L +G QIHT  I T     
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN 497

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V + L+DMYAK G+   A  I   L     V WTAMI+ YVQ     EAL LF EM  
Sbjct: 498 VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEY 557

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  D   FAS + A A + +L  G+Q+H+    +GF +++   +AL+ +YA+ G +++
Sbjct: 558 RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQE 617

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM--------------------- 468
           A   F+++ ++N +SWN+L+S  AQ+G  +  L+ F  M                     
Sbjct: 618 AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS 677

Query: 469 --------------VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
                         +++GY  +     S++S  +  G I +  + FN M+++  +     
Sbjct: 678 LANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS---- 733

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
            + +M+    + GC  EA +L  +M      P+ + +  V+++C    ++   K+  D  
Sbjct: 734 -WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSAC---SHIGLVKEGLDYF 789

Query: 572 FKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAM 606
             M K+ D  P    YV + ++   AGQ +   +  K M
Sbjct: 790 ESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM 828



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 175/565 (30%), Positives = 287/565 (50%), Gaps = 44/565 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFVDMRTDGGSD 70
           L+  Y + G+   A ++F+   +R+  SW  +I  + +QK+ F + F LF  M  +G + 
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRMLAEGIT- 156

Query: 71  PDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           P+  TFA +L  C   D A N + QVH+    +G++S  ++ N L+D Y K   ++ A++
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  KD V++ A+I+G ++ GL EEAI LF +M      P+ +  ++ LSA   +  
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LG Q+H  V+K  F    +V N L+ LYS+   ++ A ++F  M   DGVSYN +I+ 
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
                    +L+LF ++Q           ++LLS  A+   L  G Q+H+  I     ++
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + +  SL+D+Y+KC   E A + F      + V W  M+ AY Q  NL ++  +F +M  
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +Q T+ SILR    L +L LG+Q+H+ VI++GF  NV+  S L+DMYAK G L  
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-- 487
           A++  + +PE ++VSW A+I+   Q+      L+ FE+M   G Q D++   S +SAC  
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576

Query: 488 ---------------------------------SHCGLIEEGLQYFNSMTQKYKLRPKKE 514
                                            + CG I+E    F  +  K  +     
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS---- 632

Query: 515 HYASMVDILCRSGCFDEAEKLMAQM 539
            + S+V  L +SG F+EA ++  +M
Sbjct: 633 -WNSLVSGLAQSGYFEEALQVFVRM 656



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 244/487 (50%), Gaps = 5/487 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   +Y  +  LL GC    +  E +++H  I K G++   ++ +SLVD+Y +      A
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            +VF E   +   S+N +I  F  +  N +   LF  M   G  P+ +TFA  L A VG 
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG- 171

Query: 188 ADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            DIA    +QVH+      F  +  VAN L+DLYSK+  +  A+K+F  +   D V++  
Sbjct: 172 GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI+  + N   +E++ LF ++  +    + +  S++LS        ++G Q+H   I   
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             SE  V N LV +Y++  +   A+ IF+ ++    V + ++IS  VQ+G  + AL LF 
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M R  +  D  T AS+L A A + +L  G QLHS  I++G  +++    +LLD+Y+K  
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            ++ A + F      NIV WN ++ A  Q  +   + + F  M   G  P+  +  S+L 
Sbjct: 412 DVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            C+  G +  G Q  ++   K   +      + ++D+  + G    A +++ ++P E D 
Sbjct: 472 TCTSLGALYLGEQ-IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDV 529

Query: 546 IMWSSVI 552
           + W+++I
Sbjct: 530 VSWTAMI 536


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/744 (38%), Positives = 442/744 (59%), Gaps = 2/744 (0%)

Query: 6    TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            T   N L++ Y + GN   A ++FN+M+ R  VS+  LI G SQ+    +A +LF  M  
Sbjct: 306  TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCL 365

Query: 66   DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            D    PD VT A+LLS CS         Q H+  IK G +S +I+  +L+D Y K   + 
Sbjct: 366  DC-LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIK 424

Query: 126  LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
             A   F     ++ V +N ++  +       E+ K+F +MQ  G +P+ FT+ + L    
Sbjct: 425  TAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCS 484

Query: 186  GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             L  + LG Q+H  V+KT F  NV+V++ L+D+Y+K   +  A K+F  + E D VS+  
Sbjct: 485  SLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTA 544

Query: 246  MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            MI  YA +E++ E+L LF+E+Q          F++ +S  A    L  G+QIH Q  V+ 
Sbjct: 545  MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
               ++ V N+LV +YA+CG+  +A   F  +     + W ++IS + Q G+ EEAL+LF 
Sbjct: 605  YSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664

Query: 366  EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            +M +A    +  TF   + A+A +A++ LGKQ+H+ +I++G  S     + L+ +YAK G
Sbjct: 665  QMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCG 724

Query: 426  SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            ++ DA + F EMPE+N +SWNA+++  +Q+G     L  FEDM Q G  P+ V+ + VLS
Sbjct: 725  NIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLS 784

Query: 486  ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            ACSH GL++EG++YF SM + + L PK EHYA +VD+L RSG    A + + +MP +PD 
Sbjct: 785  ACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDA 844

Query: 546  IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            ++  +++++C +HKN++  + AA  L ++E  +D+A YV +SN+YAV G+W    + ++ 
Sbjct: 845  MVCRTLLSACIVHKNIDIGEFAASHLLELEP-KDSATYVLLSNMYAVTGKWGCRDRTRQM 903

Query: 606  MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
            M++RGV+K    SW+E+ + VH F A D+ HP  ++I   + +L +   + GY P T+  
Sbjct: 904  MKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSL 963

Query: 666  LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            L+D +   K  +   HSE+LAIAF L++    +PI V KNLR C DCH  IK +SKI+ R
Sbjct: 964  LNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDR 1023

Query: 726  EITVRDSSRFHHFKDGFCSCRDFW 749
             I VRDS RFHHFK G CSC+D+W
Sbjct: 1024 VIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 325/599 (54%), Gaps = 3/599 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K+G L +A+++F+ +  R +VSW  ++ G SQ     EA  LF  M T G  
Sbjct: 209 NPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVY 268

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              Y+ F+++LS C++ +      Q+H  ++K G++    +CN+LV  Y ++     A +
Sbjct: 269 PTPYI-FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M Q+D VS+N+LI+G +++G +++A++LF +M     KP   T A+ LSA   +  
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G+Q H++ +K     ++ +  ALLDLY K   +  A + F      + V +NVM+  
Sbjct: 388 LLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVA 447

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y   +   ES K+F ++Q    + +QF + ++L   ++   + +G QIHTQ + T     
Sbjct: 448 YGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFN 507

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V++ L+DMYAK G+ + A +IF  L     V WTAMI+ Y Q     EALNLF EM  
Sbjct: 508 VYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQD 567

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I +D   FAS + A A + +L+ G+Q+H+    SG+  ++  G+AL+ +YA+ G ++D
Sbjct: 568 QGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRD 627

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F ++  ++ +SWN+LIS  AQ+G  +  L  F  M ++G + +S +    +SA ++
Sbjct: 628 AYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAAN 687

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              ++ G Q  ++M  K     + E    ++ +  + G  D+AE+   +MP E +EI W+
Sbjct: 688 VANVKLGKQ-IHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWN 745

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           +++     H +   A    + + ++  L +   +V + +  +  G  +   +  ++MRE
Sbjct: 746 AMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMRE 804



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 269/555 (48%), Gaps = 14/555 (2%)

Query: 47  YSQKNQFREAFKL-FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
           Y+  N   EA  + F+ +  + G   +  T+  LL GC      ++  ++H  I+K G+ 
Sbjct: 41  YAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFC 100

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
           + +++C  L+D Y     LD A  VF EMP +    +N ++  F    +    + LF  M
Sbjct: 101 AEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRM 160

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHD 223
                KP + T+A  L  G G  D+      ++HA  +   +  ++FV N L+DLY K+ 
Sbjct: 161 LQEKVKPDERTYAGVLR-GCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            +  A+K+F  + + D VS+  M++  + +   +E++ LF ++  +    + + FS++LS
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
                   ++G Q+H   +      E  V N+LV +Y++ G F  A+++F  +     V 
Sbjct: 280 ACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVS 339

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           + ++IS   Q+G  ++AL LF +MC   +  D  T AS+L A + + +L +GKQ HS+ I
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           ++G  S++    ALLD+Y K   +K A + F      N+V WN ++ A     +   + K
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK 459

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS--MVD 521
            F  M   G +P+  +  S+L  CS    ++ G Q     TQ  K   +   Y S  ++D
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH---TQVLKTGFQFNVYVSSVLID 516

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN----LEFAKKAADQLFKMEKL 577
           +  + G  D A K+  ++  E D + W+++I     H+     L   K+  DQ    + +
Sbjct: 517 MYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNI 575

Query: 578 RDAAPYVAMSNIYAV 592
             A+   A + I A+
Sbjct: 576 GFASAISACAGIQAL 590



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 155/263 (58%), Gaps = 1/263 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +++LI  Y K G L  A ++F  + ++  VSWT +I GY+Q  +F EA  LF +M+
Sbjct: 507 NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ 566

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G   D + FA+ +S C+     N+  Q+HA     GY+  L + N+LV  Y +   +
Sbjct: 567 -DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKV 625

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A   F ++  KD++S+N+LI+GFA+ G  EEA+ LF +M   G + + FTF  A+SA 
Sbjct: 626 RDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAA 685

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +A++ LG+Q+HA ++KT       V+N L+ LY+K   + +A + F EMPE + +S+N
Sbjct: 686 ANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWN 745

Query: 245 VMITCYAWNEQYKESLKLFRELQ 267
            M+T Y+ +    ++L LF +++
Sbjct: 746 AMLTGYSQHGHGFKALSLFEDMK 768



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 224/507 (44%), Gaps = 34/507 (6%)

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           AL   ++ +      I     M+  G + +  T+   L   +     + G ++H  ++K 
Sbjct: 38  ALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKM 97

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            F   V +   L+DLY     +  A  +F EMP      +N ++  +   +     L LF
Sbjct: 98  GFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLF 157

Query: 264 RELQFTRFDRSQFPFSTLL-SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           R +   +    +  ++ +L       +      +IH +TI     + + V N L+D+Y K
Sbjct: 158 RRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFK 217

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G    AK++F  L    +V W AM+S   Q G  EEA+ LF +M  + +      F+S+
Sbjct: 218 NGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSV 277

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L A  ++    +G+QLH  V++ GF    +  +AL+ +Y++ G+   A Q F  M +R+ 
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN- 501
           VS+N+LIS  +Q G +   L+ F+ M     +PD V++ S+LSACS  G +  G Q+ + 
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSY 397

Query: 502 --------------------------SMTQKYKLRPKKEHYASMVDILCRSGCFD---EA 532
                                         ++ L  + E+      +L   G  D   E+
Sbjct: 398 AIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNES 457

Query: 533 EKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            K+  QM     EP++  + S++ +C   + ++  ++   Q+ K     +      + ++
Sbjct: 458 FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDM 517

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTA 616
           YA  G+ +   ++ + ++E+ V   TA
Sbjct: 518 YAKLGKLDHALKIFRRLKEKDVVSWTA 544



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 121/303 (39%), Gaps = 42/303 (13%)

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           TA+  AY         +N    M    + A+  T+  +L         S G +LH  +++
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            GF + V     L+D+Y   G L  A+  F EMP R +  WN ++        A   L  
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGLQ-------------- 498
           F  M+Q   +PD  +   VL  C             H   I  G +              
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216

Query: 499 ---YFNSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSS 550
              + NS  + +    K++   + +M+  L +SGC +EA  L  QM      P   ++SS
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSS 276

Query: 551 VINSCRIHKNLEFAKKAADQL--FKMEKLRDAAPYV--AMSNIYAVAGQWESVSQVKKAM 606
           V+++C     +EF  K  +QL    +++      YV  A+  +Y+  G +    QV  AM
Sbjct: 277 VLSAC---TKVEFY-KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM 332

Query: 607 RER 609
            +R
Sbjct: 333 LQR 335



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 15/153 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +  T  +N+LI+ Y K GN+  A   F  M ++  +SW  ++ GYSQ     +A  LF D
Sbjct: 707 DSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFED 766

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELI-------QVHADIIKFGYNSILIICNSLV 115
           M+   G  P++VTF  +LS CS     +E I       +VH  + K  + +       +V
Sbjct: 767 MKQL-GVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYA------CVV 819

Query: 116 DSYCKIRCLDLARRVFKEMP-QKDSVSFNALIT 147
           D   +   L  ARR  +EMP Q D++    L++
Sbjct: 820 DLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/741 (38%), Positives = 443/741 (59%), Gaps = 9/741 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K  N    R +F+ M +R  V+WT LI GY++ +   E   LF+ M+ D G+ P
Sbjct: 138 LVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ-DEGTQP 196

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA  L   +E       +QVH  ++K G +  + + NSL++ Y K   +  AR +F
Sbjct: 197 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 256

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +   K  V++N++I+G+A  GL+ EA+ +F  M+    + S+ +FA+ +     L ++ 
Sbjct: 257 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELR 316

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
              Q+H  VVK  FV +  +  AL+  YSK   +++A +LF E   +  V S+  MI+ +
Sbjct: 317 FTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGF 376

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N+  +E++ LF E++      ++F +S +L+     L +    ++H Q + T      
Sbjct: 377 LQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSS 432

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+D Y K G+ +EA ++F+ + +   V W+AM++ Y Q G  E A+ +F E+ + 
Sbjct: 433 TVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKG 492

Query: 371 NISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ TF+SIL   +A  AS+  GKQ H F I+S   S++   SALL MYAK G ++ 
Sbjct: 493 GVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIES 552

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + FK   E+++VSWN++IS  AQ+G A   L  F++M +   + DSV+ + V +AC+H
Sbjct: 553 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTH 612

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YF+ M +  K+ P KEH + MVD+  R+G  ++A K++  MP      +W 
Sbjct: 613 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWR 672

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HK  E  + AA+++  M    D+A YV +SN+YA +G W+  ++V+K M ER
Sbjct: 673 TILAACRVHKKTELGRLAAEKIIAMIP-EDSAAYVLLSNMYAESGDWQERAKVRKLMNER 731

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K   YSW+E+K+K + F A D  HP  ++I  K+E+L   +K  GY+PDTS  L D 
Sbjct: 732 NVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 791

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K   L  HSERLAIAF LI TP+GSP+L++KNLR C DCH  IKLI+KI  REI V
Sbjct: 792 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVV 851

Query: 730 RDSSRFHHF-KDGFCSCRDFW 749
           RDS+RFHHF  DG CSC DFW
Sbjct: 852 RDSNRFHHFSSDGVCSCGDFW 872



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 266/553 (48%), Gaps = 72/553 (13%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  +F + P +D  S+ +L+ GF+++G  +EA +LF+ +QHLG +     F++ L     
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D   GRQ+H   +K  F+++V V  +L+D Y K     + R +F EM E + V++  +
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ YA N   +E L LF  +Q      + F F+  L V+A +     G Q+HT  +    
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              + V+NSL+++Y KCG   +A+ +F      S V W +MIS Y   G   EAL +F  
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M   ++   +++FASI++  A L  L   +QLH  V++ GF+ +    +AL+  Y+K  +
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + DA++ FKE     N+VSW A+IS   QN   +  +  F +M + G +P+  +   +L+
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILT 409

Query: 486 ACS-------------------------------HCGLIEEGLQYFNSMTQKYKLRPKKE 514
           A                                   G ++E  + F+ +  K  +     
Sbjct: 410 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV----- 464

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC---------------- 555
            +++M+    ++G  + A K+ +++     +P+E  +SS++N C                
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGF 524

Query: 556 ----RIHKNL--------EFAKK----AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
               R+  +L         +AKK    +A+++FK ++ +D   + +M + YA  GQ    
Sbjct: 525 AIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 584

Query: 600 SQVKKAMRERGVR 612
             V K M++R V+
Sbjct: 585 LDVFKEMKKRKVK 597



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 236/450 (52%), Gaps = 13/450 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y+K GN+  AR LF+    ++ V+W  +I GY+      EA  +F  MR +  
Sbjct: 236 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHV 295

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              +  +FA+++  C+         Q+H  ++K+G+     I  +L+ +Y K   +  A 
Sbjct: 296 RLSE-SSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDAL 354

Query: 129 RVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+FKE     + VS+ A+I+GF +    EEA+ LF EM+  G +P++FT++  L+A    
Sbjct: 355 RLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA---- 410

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +    +VHA VVKTN+  +  V  ALLD Y K   V EA K+F  +   D V+++ M+
Sbjct: 411 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAML 470

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQIGRQIHTQTIVTTA 306
             YA   + + ++K+F EL       ++F FS++L+V  A    +  G+Q H   I +  
Sbjct: 471 AGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRL 530

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S + V+++L+ MYAK G  E A+E+F        V W +MIS Y Q G   +AL++F E
Sbjct: 531 DSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 590

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSG 425
           M +  +  D  TF  +  A      +  G++    ++R   ++      S ++D+Y+++G
Sbjct: 591 MKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 650

Query: 426 SLKDAIQTFKEMPERNIVS---WNALISAC 452
            L+ A++    MP  N+     W  +++AC
Sbjct: 651 QLEKAMKVIDNMP--NLAGSTIWRTILAAC 678



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 215/489 (43%), Gaps = 49/489 (10%)

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
           +K NF    F A +   LY  H+       LF + P+ D  SY  ++  ++ + + +E+ 
Sbjct: 30  LKPNFRIYCFGAASSSRLYYAHN-------LFDKSPDRDRESYTSLLFGFSRDGRTQEAT 82

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
           +LF  +Q    +     FS++L V A   D   GRQ+H Q I    + +V V  SLVD Y
Sbjct: 83  RLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTY 142

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
            K   F++ + +F  +   + V WT +IS Y +    EE L LF+ M       +  TFA
Sbjct: 143 MKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFA 202

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           + L   AE      G Q+H+ V+++G    +   ++L+++Y K G+++ A   F +   +
Sbjct: 203 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 262

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------H 489
           ++V+WN++IS  A NG     L  F  M  +  +    S  S++  C+           H
Sbjct: 263 SVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLH 322

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           C +++ G  +  ++  +  L        +M+D L          +L  +  F  + + W+
Sbjct: 323 CSVVKYGFVFDQNI--RTALMVAYSKCMAMLDAL----------RLFKETGFLGNVVSWT 370

Query: 550 SVINSCRIHKNLEFA---------KKAADQLFKMEKLRDAAPYVAMSNIYA--VAGQWES 598
           ++I+    +   E A         K      F    +  A P ++ S ++A  V   +E 
Sbjct: 371 AMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 430

Query: 599 VSQVKKAMRERGVR------KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
            S V  A+ +  V+          +S ++ K  V  ++A    + Q  E    I+ +  E
Sbjct: 431 SSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV-AWSAMLAGYAQAGETEAAIK-IFSE 488

Query: 653 MKKEGYKPD 661
           + K G KP+
Sbjct: 489 LTKGGVKPN 497


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/740 (38%), Positives = 441/740 (59%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K+ ++     +F+ M  +  VSWT L+ GY Q     +A KLF  M+ +G   P
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG-IKP 191

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA +L G +      + +QVH  +IK G +S + + NS+V+ Y K   +  A+ VF
Sbjct: 192 NPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVF 251

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +++VS+N++I GF   GL+ EA +LF  M+  G K +   FA  +     + +++
Sbjct: 252 DSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS 311

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
             +Q+H  V+K     ++ +  AL+  YSK   + +A KLF  M  V  V S+  +I+ Y
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGY 371

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N +   ++ LF +++      + F +ST+L+  A         QIH   + T   +  
Sbjct: 372 VQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSP 427

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L D Y+K G   EA +IF  +     V W+AM+S Y Q G++E A+ +F+++ + 
Sbjct: 428 SVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKE 487

Query: 371 NISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ TF+S+L A +A  AS+  GKQ HS  I+SGF + +   SAL+ MYAK G+++ 
Sbjct: 488 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 547

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + FK   +R++VSWN++IS  AQ+G  + +LK FE+M     + D ++ + V+SAC+H
Sbjct: 548 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 607

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+ EG +YF+ M + Y + P  EHY+ MVD+  R+G  ++A  L+ +MPF     +W 
Sbjct: 608 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 667

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+H N++  + AA++L  ++  +D+A YV +SNIYA AG W+  ++V+K M  +
Sbjct: 668 TLLAACRVHLNVQLGELAAEKLISLQP-QDSAAYVLLSNIYATAGNWQERAKVRKLMDMK 726

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K   YSW+E+K+K   F A D  HPQ++ I  K+E L   +K  GY PDT   LHD 
Sbjct: 727 KVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDV 786

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K   L  HSERLAIAF LI TP G+PI ++KNLR C DCH  IKLISKI GR+I V
Sbjct: 787 EEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVV 846

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHFK G CSC D+W
Sbjct: 847 RDSNRFHHFKGGSCSCGDYW 866



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 255/480 (53%), Gaps = 11/480 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +++ Y KS  ++ A+ +F+SM +R AVSW  +I G+       EAF+LF  MR +G  
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVK 291

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
               + FAT++  C+     +   Q+H  +IK G +  L I  +L+ +Y K   +D A +
Sbjct: 292 LTQTI-FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 130 VFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F  M   ++ VS+ A+I+G+ + G  + A+ LF +M+  G +P+ FT++  L+A   ++
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS 410

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                 Q+HA VVKTN+  +  V  AL D YSK     EA K+F  + E D V+++ M++
Sbjct: 411 P----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQIGRQIHTQTIVTTAI 307
            YA     + ++K+F +L     + ++F FS++L+   A    ++ G+Q H+ +I +   
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 526

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           + + V+++LV MYAK G  E A E+F        V W +MIS Y Q G  +++L +F EM
Sbjct: 527 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGS 426
              N+  D  TF  ++ A      ++ G++    +++    +  +   S ++D+Y+++G 
Sbjct: 587 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 646

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           L+ A+    +MP       W  L++AC  + + Q    + E ++    QP   +   +LS
Sbjct: 647 LEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLIS--LQPQDSAAYVLLS 704



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 232/459 (50%), Gaps = 30/459 (6%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ++++F E PQ+     N L+  F++   N+EA+ LF+ ++  G      + +  L     
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  +G+QVH   +K  FVE+V V  +L+D+Y K + V +  ++F EM   + VS+  +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  Y  N   +++LKLF ++Q      + F F+ +L  +A    ++ G Q+HT  I +  
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S + V NS+V+MY+K     +AK +F ++ + + V W +MI+ +V  G   EA  LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +   Q  FA++++  A +  +S  KQLH  VI++G   ++   +AL+  Y+K   
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 427 LKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + DA + F  M   +N+VSW A+IS   QNG     +  F  M + G +P+  +  ++L+
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 486 ACS-------HCGLIEEGLQY-----------------FNSMTQKYKLRPKKE--HYASM 519
           A +       H  +++   +                   N   + ++L  +K+   +++M
Sbjct: 405 ANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAM 464

Query: 520 VDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC 555
           +    + G  + A K+  Q+     EP+E  +SSV+N+C
Sbjct: 465 LSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNAC 503



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L++ Y K GN+ +A E+F   VDR  VSW  +I GY+Q    +++ K+F +MR+   
Sbjct: 532 SSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSK-N 590

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII--CNSLVDSYCKIRCLDL 126
            + D +TF  ++S C+     NE  Q + D++   Y+ +  +   + +VD Y +   L+ 
Sbjct: 591 LELDGITFIGVISACTHAGLVNEG-QRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEK 649

Query: 127 ARRVFKEMP 135
           A  +  +MP
Sbjct: 650 AMDLINKMP 658


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/740 (37%), Positives = 439/740 (59%), Gaps = 2/740 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LIS Y + G+L  ARELF +M  R  +SW  +I GY+++    EA +L+  M+++G  
Sbjct: 369  NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG-V 427

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             P  VTF  LLS C+      +   +H DI++ G  S   + N+L++ Y +   L  A+ 
Sbjct: 428  KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF+    +D +S+N++I G A+ G  E A KLF EMQ+   +P + TFA+ LS       
Sbjct: 488  VFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA 547

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + LG+Q+H  + ++    +V + NAL+++Y +   + +AR +F  +   D +S+  MI  
Sbjct: 548  LELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
             A   +  ++++LF ++Q   F   +  FS++L V  +   L  G+++    + +    +
Sbjct: 608  CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELD 667

Query: 310  VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
              V N+L+  Y+K G   +A+E+F  +     V W  +I+ Y Q G  + A+    +M  
Sbjct: 668  TGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQE 727

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             ++  ++ +F S+L A +  ++L  GK++H+ +++     +V  G+AL+ MYAK GS  +
Sbjct: 728  QDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGE 787

Query: 430  AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            A + F  + E+N+V+WNA+I+A AQ+G A   L  F  M + G +PD  +  S+LSAC+H
Sbjct: 788  AQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNH 847

Query: 490  CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             GL+ EG Q F+SM  +Y + P  EHY  +V +L R+  F EAE L+ QMPF PD  +W 
Sbjct: 848  AGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWE 907

Query: 550  SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            +++ +CRIH N+  A+ AA+   K+   R+ A Y+ +SN+YA AG+W+ V+++++ M  R
Sbjct: 908  TLLGACRIHGNIALAEHAANNALKLNA-RNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 966

Query: 610  GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            G+RK    SW+E+ + +H F A D  HP+T EI  +++ L  EM++ GY PDT   LHD 
Sbjct: 967  GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDL 1026

Query: 670  DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
             +  +  SL  HSERLAIA+ LI TP G+PI + KNLR C DCH A K ISK+ GREI  
Sbjct: 1027 GKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIA 1086

Query: 730  RDSSRFHHFKDGFCSCRDFW 749
            RDS+RFH FK+G CSC D+W
Sbjct: 1087 RDSNRFHSFKNGKCSCEDYW 1106



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/567 (31%), Positives = 314/567 (55%), Gaps = 10/567 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++  V+ G++ +A++ F    DR  V +  LI   +Q     EAF+ +  MR+DG +  
Sbjct: 270 LVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA-L 328

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARR 129
           +  T+ ++L+ CS          +H+ I + G++S + I N+L+  Y   RC DL  AR 
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA--RCGDLPKARE 386

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP++D +S+NA+I G+A+     EA++L+ +MQ  G KP   TF   LSA    + 
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            A G+ +H  ++++    N  +ANAL+++Y +   ++EA+ +F      D +S+N MI  
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A +  Y+ + KLF+E+Q    +     F+++LS   N   L++G+QIH +   +    +
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V + N+L++MY +CG  ++A+ +F +L H   + WTAMI     +G   +A+ LF +M  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                 ++TF+SIL+     A L  GK++ ++++ SG+  +   G+AL+  Y+KSGS+ D
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F +MP R+IVSWN +I+  AQNG  Q  ++    M +    P+  S +S+L+ACS 
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +EEG +    + ++ KL+      A+++ +  + G   EA+++   +  E + + W+
Sbjct: 747 FSALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWN 804

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEK 576
           ++IN+   H     A KA      MEK
Sbjct: 805 AMINAYAQHG---LASKALGFFNCMEK 828



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 194/695 (27%), Positives = 330/695 (47%), Gaps = 66/695 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K G+L  AR++F  +  R  VS+  ++G Y+QK   +E   LF  M ++G S
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC--LDLA 127
            PD VT+  LL   + P   +E  ++H   ++ G NS + +  +LV + C +RC  +D A
Sbjct: 227 -PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALV-TMC-VRCGDVDSA 283

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           ++ FK    +D V +NALI   A+ G N EA + +  M+  G   +  T+ + L+A    
Sbjct: 284 KQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+ +H+ + +     +V + NAL+ +Y++   + +AR+LF  MP+ D +S+N +I
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA  E   E+++L++++Q       +  F  LLS  AN      G+ IH   + +   
Sbjct: 404 AGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S   +AN+L++MY +CG   EA+ +F        + W +MI+ + Q G+ E A  LF EM
Sbjct: 464 SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM 523

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  D  TFAS+L       +L LGKQ+H  +  SG   +V  G+AL++MY + GSL
Sbjct: 524 QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSL 583

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +  R+++SW A+I  CA  G+    ++ F  M   G++P   +  S+L  C
Sbjct: 584 QDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVC 643

Query: 488 SHCGLIEEGLQYFNS-MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---- 542
           +    ++EG +     +   Y+L     +  +++    +SG   +A ++  +MP      
Sbjct: 644 TSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSRDIVS 701

Query: 543 ------------------------------PDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
                                         P++  + S++N+C     LE  K+   ++ 
Sbjct: 702 WNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIV 761

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV----RKVTAYSWVELKSKVHV 628
           K +   D     A+ ++YA  G      +V   + E+ V      + AY+   L SK   
Sbjct: 762 KRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALG 821

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           F                       M+KEG KPD S
Sbjct: 822 F--------------------FNCMEKEGIKPDGS 836



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/625 (27%), Positives = 310/625 (49%), Gaps = 49/625 (7%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           ++ +  T+  LL  C+      E  ++HA +++      + + N L++ Y K R +  A 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VFKEMP++D +S+N+LI+ +A++G  ++A +LF EMQ+ GF P+  T+ + L+A    A
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           ++  G+++H+ ++K  +  +  V N+LL +Y K   +  AR++F  +   D VSYN M+ 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA     KE L LF ++        +  +  LL        L  G++IH  T+     S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +++V  +LV M  +CG  + AK+ F   +    V + A+I+A  Q G+  EA   +  M 
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              ++ ++ T+ SIL A +   +L  GK +HS +   G  S+V  G+AL+ MYA+ G L 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A + F  MP+R+++SWNA+I+  A+  D    ++ ++ M   G +P  V+ L +LSAC+
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 489 -----------HCGLIEEGLQ----YFNSMTQKYK----LRPKKE-----------HYAS 518
                      H  ++  G++      N++   Y+    L   +             + S
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 519 MVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           M+    + G ++ A KL  +M     EPD I ++SV++ C+  + LE  K+   ++ +  
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              D     A+ N+Y   G  +    V  +++ R V      SW  +     +    D+ 
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV-----MSWTAM-----IGGCADQ- 611

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKP 660
                E  + IE L  +M+ EG++P
Sbjct: 612 ----GEDMKAIE-LFWQMQNEGFRP 631



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 287/550 (52%), Gaps = 9/550 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N+LI+ YVK  ++  A ++F  M  R  +SW  LI  Y+Q+   ++AF+LF +M+ + G
Sbjct: 65  SNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAG 123

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ +T+ ++L+ C  P       ++H+ IIK GY     + NSL+  Y K   L  AR
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  +  +D VS+N ++  +A++   +E + LF +M   G  P   T+   L A    +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+++H   V+     ++ V  AL+ +  +   V  A++ F    + D V YN +I 
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIA 303

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTT 305
             A   Q+  +++ F +    R D      +T LS++   +    L+ G+ IH+      
Sbjct: 304 ALA---QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S+V++ N+L+ MYA+CG   +A+E+F  +     + W A+I+ Y ++ +  EA+ L+ 
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYK 420

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    +   + TF  +L A A  ++ + GK +H  ++RSG  SN    +AL++MY + G
Sbjct: 421 QMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG 480

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL +A   F+    R+++SWN++I+  AQ+G  +   K F++M     +PD+++  SVLS
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            C +   +E G Q    +T+   L+       +++++  R G   +A  +   +    D 
Sbjct: 541 GCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DV 598

Query: 546 IMWSSVINSC 555
           + W+++I  C
Sbjct: 599 MSWTAMIGGC 608


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/740 (38%), Positives = 438/740 (59%), Gaps = 4/740 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y +  +L  AR +F  M +R +VSW  LI GY     + +A  ++   R  G  
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T +++L  C       E + VH  I K G    +II N L+  Y K   L  ARR
Sbjct: 220 -PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KDSV++N +I G+A+ G +E ++KLF++M   GF P   +  + + A     D
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G+ VH +++ + F  +    N L+D+Y+K   ++ A+++F      D V++N +I  
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +  YKE L+ F+ ++  R   S   F  LLS+ +   D+  GR IH   I     +E
Sbjct: 398 YTQSGYYKEGLESFKMMKMERKPDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAE 456

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + + NSL+D+YAKCG  ++  ++F+ +S    + W  +I++ V   +      +  EM  
Sbjct: 457 LIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D+AT   IL   + LA    GK++H ++ +SGF SNV  G+AL++MY+K GSL++
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLEN 576

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            I+ FK M E+++V+W ALISA    G+ +  LK+F+DM  SG  PDSV+ ++ + ACSH
Sbjct: 577 CIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH 636

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G+++EGL++F+ M   Y L P+ EHYA +VD+L RSG   +AE+ +  MP +PD  +W 
Sbjct: 637 SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR   N   A++ + ++ ++    D   YV +SNIYA  G+W+ V  V+ +M+ +
Sbjct: 697 ALLSACRARGNTNIAQRVSKKILELNS-DDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SW+E++ +V+VF   D+   Q ++++  +E L++ M KEGY  D   ALHD 
Sbjct: 756 GLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDV 815

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +E+ K + L  HSERLAIAF L+NT  GSP+LVMKNLR C DCH   K I+KI  REI V
Sbjct: 816 EEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILV 875

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD++RFH FKDG CSC D W
Sbjct: 876 RDANRFHRFKDGACSCGDHW 895



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 245/479 (51%), Gaps = 5/479 (1%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM-P 135
           ++LL   S      +L  VH+ II  G +  +I    L+  Y +++    +  VF+ + P
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             +   +N++I      GL  +A+  + EM+    +P  FTF + +++   + D+ LG  
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH   ++  F  ++++ NAL+D+YS+   +  AR +F EM   D VS+N +I+ Y  N  
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           ++++L ++ + + T      F  S++L    + + ++ G  +H          +V + N 
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ MY K  R  EA+ +F+ ++   +V W  MI  Y Q G  E ++ LF++M    +  D
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PD 321

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             +  S +RA  +   L +GK +H ++I SGF  +  + + L+DMYAK G L  A + F 
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
               ++ V+WN+LI+   Q+G  +  L+SF+ M++   +PDSV+ + +LS  S    I +
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQ 440

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           G +  +    K+    +     S++D+  + G  D+  K+ + M    D I W++VI S
Sbjct: 441 G-RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIAS 497



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 202/407 (49%), Gaps = 21/407 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS-YNVMITCYAW 252
           R VH+ ++ +    +V  +  L+  Y++    + +  +F  +   + V  +N +I     
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N  + ++L  + E++  +     F F ++++  A  LDL++G  +H   +     S++ +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+DMY++    + A+ +F  +S+  +V W ++IS Y   G  E+AL+++ +     +
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T +S+L A   L ++  G  +H  + + G   +V  G+ LL MY K   L++A +
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F +M  ++ V+WN +I   AQ G  +A++K F DM+  G+ PD +S+ S + AC   G 
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILC--RSGCFDEAEKLMAQMPFEP----DEI 546
           ++ G         KY +    E      +IL    + C D    L AQ  F+     D +
Sbjct: 338 LQVG-----KFVHKYLIGSGFECDTVACNILIDMYAKCGD---LLAAQEVFDTTKCKDSV 389

Query: 547 MWSSVINSCRIHKNLEFAKKAAD--QLFKMEKLRDAAPYVAMSNIYA 591
            W+S+IN    +    + K+  +  ++ KME+  D+  +V + +I++
Sbjct: 390 TWNSLING---YTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFS 433



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 4/354 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV+ N+LI  Y K G+L  A+E+F++   + +V+W  LI GY+Q   ++E  + F  M+
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK 415

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +    PD VTF  LLS  S+    N+   +H D+IKFG+ + LII NSL+D Y K   +
Sbjct: 416 ME--RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEM 473

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D   +VF  M   D +S+N +I             ++  EM+  G  P + T    L   
Sbjct: 474 DDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA    G+++H ++ K+ F  NV + NAL+++YSK   +    K+F  M E D V++ 
Sbjct: 534 SLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWT 593

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ +    + K++LK F++++ +        F   +   ++   ++ G +   +    
Sbjct: 594 ALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTD 653

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGN 356
             +   ++    +VD+ A+ G   +A+E   ++        W A++SA   +GN
Sbjct: 654 YNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 170/406 (41%), Gaps = 65/406 (16%)

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           +F  S+LL  +++  +    R +H+  I +     V  +  L+  YA+      +  +F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 335 NLSHISTV-PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           ++S  + V  W ++I A    G   +AL  + EM    +  D  TF S++ + A +  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LG  +H   +  GF S+++ G+AL+DMY++   L +A   F+EM  R+ VSWN+LIS   
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF------------- 500
            NG  +  L  +     +G  PD  ++ SVL AC     ++EG+                
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258

Query: 501 --NSMTQKY----KLRPKKEHYASMV--------DILC---RSGCFDEAEKLMAQM--PF 541
             N +   Y    +LR  +  ++ M          ++C   + G  + + KL   M   F
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGF 318

Query: 542 EPDEIMWSSVINSCRIHKNLEFAK-------------------------------KAADQ 570
            PD +  +S I +C    +L+  K                                AA +
Sbjct: 319 VPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQE 378

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQW-ESVSQVKKAMRERGVRKVT 615
           +F   K +D+  + ++ N Y  +G + E +   K    ER    VT
Sbjct: 379 VFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVT 424


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/740 (37%), Positives = 439/740 (59%), Gaps = 4/740 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y +  +L  AR++F  M  R  VSW  LI GY+    + EA +++   R + G 
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR-NLGV 212

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T +++L  C    +  E   +H  I K G    +I+ N L+  YCK   L   RR
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M  +D+VS+N +I G+++ GL EE+IKLF+EM +  FKP   T  + L A   L D
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGD 331

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VH +++ + +  +   +N L+++Y+K   ++ ++++F  M   D VS+N MI  
Sbjct: 332 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 391

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N  + E++KLF+ ++ T        +  LLS+     DL +G+++H         S 
Sbjct: 392 YIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSN 450

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+N+LVDMYAKCG   ++ ++F N+     + W  +I++ V   +    L +   M  
Sbjct: 451 IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 510

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             ++ D AT  SIL   + LA+   GK++H  + + G  S+V  G+ L++MY+K GSL++
Sbjct: 511 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 570

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           + Q FK M  +++V+W ALISAC   G+ +  +++F +M  +G  PD V+ ++++ ACSH
Sbjct: 571 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 630

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEGL YF+ M + YK+ P+ EHYA +VD+L RS   D+AE  +  MP +PD  +W 
Sbjct: 631 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWG 690

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR+  + E A++ ++++ ++    D   YV +SNIYA  G+W+ V  ++K+++ R
Sbjct: 691 ALLSACRMSGDTEIAERVSERIIELNP-DDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 749

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SW+E+++KV+VF    +   Q  E+ + +  L   M KEGY  +    LHD 
Sbjct: 750 GLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 809

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           DE+ K + L  HSERLAIAF L+NT  G+P+ VMKNLR C DCH   K ISKI  RE+ V
Sbjct: 810 DEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLV 869

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD++RFH FKDG CSC D+W
Sbjct: 870 RDANRFHVFKDGACSCGDYW 889



 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 160/547 (29%), Positives = 291/547 (53%), Gaps = 5/547 (0%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  +I   +    F EA  L+ + +      PD  TF ++++ C+          +H  +
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRV 141

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           +  G+ S L I N+L+D YC+   LD AR+VF+EMP +D VS+N+LI+G+   G   EA+
Sbjct: 142 LDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           +++   ++LG  P  +T ++ L A  GL  +  G  +H  + K    ++V V N LL +Y
Sbjct: 202 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 261

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
            K + +++ R++F +M   D VS+N MI  Y+    Y+ES+KLF E+   +F       +
Sbjct: 262 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTIT 320

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           ++L    +  DL+ G+ +H   I +    +   +N L++MYAKCG    ++E+F+ +   
Sbjct: 321 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 380

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
            +V W +MI+ Y+Q G+ +EA+ LF +M + ++  D  T+  +L  S +L  L LGK+LH
Sbjct: 381 DSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
             + + GF SN+   + L+DMYAK G + D+++ F+ M  R+I++WN +I++C  + D  
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 499

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             L+    M   G  PD  ++LS+L  CS      +G +  +    K  L         +
Sbjct: 500 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIFKLGLESDVPVGNVL 558

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           +++  + G    + ++   M    D + W+++I++C ++   + A +A  ++     + D
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPD 617

Query: 580 AAPYVAM 586
              +VA+
Sbjct: 618 HVAFVAI 624



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 238/481 (49%), Gaps = 5/481 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-EM 134
           F+++    +   T  +L ++H+ II  G +  +I    L+  Y   R    +  VF+   
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P  +   +N++I      GL  EA+ L+ E Q +  +P  +TF + ++A  GL D  + +
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            +H  V+   F  ++++ NAL+D+Y + + + +ARK+F EMP  D VS+N +I+ Y  N 
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            + E+L+++   +        +  S++L        ++ G  IH          +V V N
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ MY K     + + IF  +     V W  MI  Y Q G  EE++ LF+EM       
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKP 314

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  SIL+A   L  L  GK +H ++I SG+  +  + + L++MYAK G+L  + + F
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M  ++ VSWN++I+   QNG     +K F+ M+++  +PDSV+ + +LS  +  G + 
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLH 433

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G +    +  K           ++VD+  + G   ++ K+   M    D I W+++I S
Sbjct: 434 LGKELHCDLA-KMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIAS 491

Query: 555 C 555
           C
Sbjct: 492 C 492



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 229/484 (47%), Gaps = 7/484 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ +  N L+S Y K   L   R +F+ MV R AVSW  +I GYSQ   + E+ KLF++M
Sbjct: 249 KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM 308

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD +T  ++L  C           VH  +I  GY       N L++ Y K   
Sbjct: 309 VNQ--FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 366

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  ++ VF  M  KDSVS+N++I  + + G  +EA+KLF +M     KP   T+   LS 
Sbjct: 367 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSM 425

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D+ LG+++H  + K  F  N+ V+N L+D+Y+K   + ++ K+F  M   D +++
Sbjct: 426 STQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITW 485

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I     +E     L++   ++            ++L V +     + G++IH     
Sbjct: 486 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK 545

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S+V V N L++MY+KCG    + ++F  +     V WTA+ISA    G  ++A+  
Sbjct: 546 LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 605

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F EM  A I  D   F +I+ A +    +  G    H           +   + ++D+ +
Sbjct: 606 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 665

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +S  L  A      MP +   S W AL+SAC  +GD +   +  E +++    PD     
Sbjct: 666 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPDDTGYY 723

Query: 482 SVLS 485
            ++S
Sbjct: 724 VLVS 727



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N V +N L+  Y K G +  + ++F +M  R  ++W  +I             ++   
Sbjct: 448 NSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 507

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MRT+G + PD  T  ++L  CS      +  ++H  I K G  S + + N L++ Y K  
Sbjct: 508 MRTEGVT-PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCG 566

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  + +VFK M  KD V++ ALI+     G  ++A++ F EM+  G  P    F A + 
Sbjct: 567 SLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIF 626

Query: 183 A 183
           A
Sbjct: 627 A 627



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 23/249 (9%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q  F+SI RA A  A+ +   +LHS +I  G   +V   + L+  YA       +   F+
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 436 -EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
              P  N+  WN++I A   NG     L  + +  +   QPD+ +  SV++AC+      
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA------ 126

Query: 495 EGLQYFNSMTQKYKLRPKKEHYAS-------MVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            GL  F  M +    R     + S       ++D+ CR    D+A K+  +MP   D + 
Sbjct: 127 -GLLDF-EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVS 183

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ---VKK 604
           W+S+I+    +    +  +A +  ++   L        MS++    G   SV +   +  
Sbjct: 184 WNSLISGYNANG---YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 240

Query: 605 AMRERGVRK 613
            + + G++K
Sbjct: 241 LIEKIGIKK 249


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/744 (37%), Positives = 444/744 (59%), Gaps = 2/744 (0%)

Query: 6    TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            T   N L++ Y +S  L +A  +F++M  R  VS+  LI G  Q+     A +LF  M+ 
Sbjct: 296  TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355

Query: 66   DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            D    PD +T A+LLS C+     ++ +Q+H+  IK G ++ +I+  SL+D Y K   ++
Sbjct: 356  DC-LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVE 414

Query: 126  LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
             A + F     ++ V +N ++  + +     ++ ++F +MQ  G  P+ FT+ + L    
Sbjct: 415  TAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 186  GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             L  + LG Q+H  V+KT F  NV+V + L+D+Y+K+  +  A ++   +PE D VS+  
Sbjct: 475  SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534

Query: 246  MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            MI  Y  ++ + E+L+LF E+++         F++ +S  A    L+ G+QIH Q+    
Sbjct: 535  MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +++ + N+L+ +YA+CGR +EA   F  +   + + W +++S   Q G  EEAL +F+
Sbjct: 595  FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFV 654

Query: 366  EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
             M R     +  T+ S + A+A LA++  G+Q+HS V+++G+ S     ++L+ +YAKSG
Sbjct: 655  RMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSG 714

Query: 426  SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            S+ DA + F +M ERN++SWNA+I+  +Q+G     L+ FE+M   G  P+ V+ + VLS
Sbjct: 715  SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774

Query: 486  ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            ACSH GL++EGL YF SM + + L PK EHY  +VD+L R+G  D A + + +MP   D 
Sbjct: 775  ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834

Query: 546  IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            ++W +++++C IHKN+E  ++AA  L ++E   D+A YV +SNIYAV+ QW      +K 
Sbjct: 835  MIWRTLLSACVIHKNIEIGERAAHHLLELEP-EDSATYVLISNIYAVSRQWIHRDWSRKL 893

Query: 606  MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
            M++ GV+K    SW+E+K+ VH F A D+LHP TN+I   I +L +   + GY  D+   
Sbjct: 894  MKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSL 953

Query: 666  LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            L++ ++  K      HSE+LAIAF L++     PI VMKNLR C DCH  IK +SKI+ R
Sbjct: 954  LNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNR 1013

Query: 726  EITVRDSSRFHHFKDGFCSCRDFW 749
             I VRD+ RFHHF  G CSC+DFW
Sbjct: 1014 SIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 315/639 (49%), Gaps = 51/639 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI  Y K+G + +A+++FN +  +  V+W  +I G SQ     EA  LF DM      
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              YV  +++LS  ++        Q+H  +IK+G++S   +CN LV  Y + R L  A R
Sbjct: 259 PTPYV-LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  M  +D VS+N+LI+G  ++G ++ A++LF +MQ    KP   T A+ LSA   +  
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G Q+H+  +K     ++ +  +LLDLYSK   V  A K F      + V +NVM+  
Sbjct: 378 LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVA 437

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y   +   +S ++FR++Q      +QF + ++L    +   L +G QIHT  I T     
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLN 497

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V + L+DMYAK G+   A  I   L     V WTAMI+ YVQ     EAL LF EM  
Sbjct: 498 VYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEY 557

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  D   FAS + A A + +L  G+Q+H+    +GF +++   +AL+ +YA+ G +++
Sbjct: 558 RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQE 617

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM--------------------- 468
           A   F+++ ++N +SWN+L+S  AQ+G  +  L+ F  M                     
Sbjct: 618 AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS 677

Query: 469 --------------VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
                         +++GY  +     S++S  +  G I +  + FN M+++  +     
Sbjct: 678 LANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS---- 733

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
            + +M+    + GC  EA +L  +M      P+ + +  V+++C    ++   K+  D  
Sbjct: 734 -WNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSAC---SHIGLVKEGLDYF 789

Query: 572 FKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAM 606
             M K+ D  P    YV + ++   AGQ +   +  K M
Sbjct: 790 ESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM 828



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 175/565 (30%), Positives = 287/565 (50%), Gaps = 44/565 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFVDMRTDGGSD 70
           L+  Y + G+   A ++F+   +R+  SW  +I  + +QK+ F + F LF  M  +G + 
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRMLAEGIT- 156

Query: 71  PDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           P+  TFA +L  C   D A N + QVH+    +G++S  ++ N L+D Y K   ++ A++
Sbjct: 157 PNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKK 216

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  KD V++ A+I+G ++ GL EEAI LF +M      P+ +  ++ LSA   +  
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LG Q+H  V+K  F    +V N L+ LYS+   ++ A ++F  M   DGVSYN +I+ 
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
                    +L+LF ++Q           ++LLS  A+   L  G Q+H+  I     ++
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + +  SL+D+Y+KC   E A + F      + V W  M+ AY Q  NL ++  +F +M  
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +Q T+ SILR    L +L LG+Q+H+ VI++GF  NV+  S L+DMYAK G L  
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-- 487
           A++  + +PE ++VSW A+I+   Q+      L+ FE+M   G Q D++   S +SAC  
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576

Query: 488 ---------------------------------SHCGLIEEGLQYFNSMTQKYKLRPKKE 514
                                            + CG I+E    F  +  K  +     
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS---- 632

Query: 515 HYASMVDILCRSGCFDEAEKLMAQM 539
            + S+V  L +SG F+EA ++  +M
Sbjct: 633 -WNSLVSGLAQSGYFEEALQVFVRM 656



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 244/487 (50%), Gaps = 5/487 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   +Y  +  LL GC    +  E +++H  I K G++   ++ +SLVD+Y +      A
Sbjct: 53  GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            +VF E   +   S+N +I  F  +  N +   LF  M   G  P+ +TFA  L A VG 
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG- 171

Query: 188 ADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            DIA    +QVH+      F  +  VAN L+DLYSK+  +  A+K+F  +   D V++  
Sbjct: 172 GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVA 231

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI+  + N   +E++ LF ++  +    + +  S++LS        ++G Q+H   I   
Sbjct: 232 MISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             SE  V N LV +Y++  +   A+ IF+ ++    V + ++IS  VQ+G  + AL LF 
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFT 351

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M R  +  D  T AS+L A A + +L  G QLHS  I++G  +++    +LLD+Y+K  
Sbjct: 352 KMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            ++ A + F      NIV WN ++ A  Q  +   + + F  M   G  P+  +  S+L 
Sbjct: 412 DVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            C+  G +  G Q  ++   K   +      + ++D+  + G    A +++ ++P E D 
Sbjct: 472 TCTSLGALYLGEQ-IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDV 529

Query: 546 IMWSSVI 552
           + W+++I
Sbjct: 530 VSWTAMI 536


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 274/740 (37%), Positives = 439/740 (59%), Gaps = 4/740 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y +  +L  AR++F  M  R  VSW  LI GY+    + EA +++   R + G 
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR-NLGV 271

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T +++L  C    +  E   +H  I K G    +I+ N L+  YCK   L   RR
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M  +D+VS+N +I G+++ GL EE+IKLF+EM +  FKP   T  + L A   L D
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGD 390

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VH +++ + +  +   +N L+++Y+K   ++ ++++F  M   D VS+N MI  
Sbjct: 391 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 450

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N  + E++KLF+ ++ T        +  LLS+     DL +G+++H         S 
Sbjct: 451 YIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSN 509

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+N+LVDMYAKCG   ++ ++F N+     + W  +I++ V   +    L +   M  
Sbjct: 510 IVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT 569

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             ++ D AT  SIL   + LA+   GK++H  + + G  S+V  G+ L++MY+K GSL++
Sbjct: 570 EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRN 629

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           + Q FK M  +++V+W ALISAC   G+ +  +++F +M  +G  PD V+ ++++ ACSH
Sbjct: 630 SFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 689

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEGL YF+ M + YK+ P+ EHYA +VD+L RS   D+AE  +  MP +PD  +W 
Sbjct: 690 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWG 749

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR+  + E A++ ++++ ++    D   YV +SN+YA  G+W+ V  ++K+++ R
Sbjct: 750 ALLSACRMSGDTEIAQRVSERIIELNP-DDTGYYVLVSNVYAALGKWDQVRSIRKSIKAR 808

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SW+E+++KV+VF    +   Q  E+ + +  L   M KEGY  +    LHD 
Sbjct: 809 GLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 868

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           DE+ K + L  HSERLAIAF L+NT  G+P+ VMKNLR C DCH   K ISKI  RE+ V
Sbjct: 869 DEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLV 928

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD++RFH FKDG CSC D+W
Sbjct: 929 RDANRFHVFKDGACSCGDYW 948



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 160/547 (29%), Positives = 292/547 (53%), Gaps = 5/547 (0%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  +I   +    F EA  L+ + +      PD  TF ++++ C+          +H  +
Sbjct: 142 WNSIIRALTHNGLFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRV 200

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           +  G+ S L I N+L+D YC+   LD AR+VF+EMP +D VS+N+LI+G+   G   EA+
Sbjct: 201 LXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 260

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           +++   ++LG  P  +T ++ L A  GL  +  G  +H  + K    ++V V N LL +Y
Sbjct: 261 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 320

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
            K + +++ R++F +M   D VS+N MI  Y+    Y+ES+KLF E+   +F       +
Sbjct: 321 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTIT 379

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           ++L    +  DL+ G+ +H   I +    +   +N L++MYAKCG    ++E+F+ +   
Sbjct: 380 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 439

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
            +V W +MI+ Y+Q G+ +EA+ LF +M + ++  D  T+  +L  S +L  L LGK+LH
Sbjct: 440 DSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH 498

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
             + + GF SN+   + L+DMYAK G + D+++ F+ M  R+I++WN +I++C  + D  
Sbjct: 499 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 558

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             L+    M   G  PD  ++LS+L  CS      +G +  +    K  L         +
Sbjct: 559 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIFKLGLESDVPVGNVL 617

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           +++  + G    + ++   M  + D + W+++I++C ++   + A +A  ++     + D
Sbjct: 618 IEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPD 676

Query: 580 AAPYVAM 586
              +VA+
Sbjct: 677 HVAFVAI 683



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 238/481 (49%), Gaps = 5/481 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-EM 134
           F+++    +   T  +L ++H+ II  G +  +I    L+  Y   R    +  VF+   
Sbjct: 75  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P  +   +N++I      GL  EA+ L+ E Q +  +P  +TF + ++A  GL D  + +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            +H  V+   F  ++++ NAL+D+Y + + + +ARK+F EMP  D VS+N +I+ Y  N 
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            + E+L+++   +        +  S++L        ++ G  IH          +V V N
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ MY K     + + IF  +     V W  MI  Y Q G  EE++ LF+EM       
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKP 373

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  SIL+A   L  L  GK +H ++I SG+  +  + + L++MYAK G+L  + + F
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M  ++ VSWN++I+   QNG     +K F+ M+++  +PDSV+ + +LS  +  G + 
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLX 492

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G +    +  K           ++VD+  + G   ++ K+   M    D I W+++I S
Sbjct: 493 LGKELHCDLA-KMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIAS 550

Query: 555 C 555
           C
Sbjct: 551 C 551



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 229/484 (47%), Gaps = 7/484 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ +  N L+S Y K   L   R +F+ MV R AVSW  +I GYSQ   + E+ KLF++M
Sbjct: 308 KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM 367

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD +T  ++L  C           VH  +I  GY       N L++ Y K   
Sbjct: 368 VNQ--FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 425

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  ++ VF  M  KDSVS+N++I  + + G  +EA+KLF +M     KP   T+   LS 
Sbjct: 426 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSM 484

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D+ LG+++H  + K  F  N+ V+N L+D+Y+K   + ++ K+F  M   D +++
Sbjct: 485 STQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITW 544

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I     +E     L++   ++            ++L V +     + G++IH     
Sbjct: 545 NTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK 604

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S+V V N L++MY+KCG    + ++F  +     V WTA+ISA    G  ++A+  
Sbjct: 605 LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 664

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F EM  A I  D   F +I+ A +    +  G    H           +   + ++D+ +
Sbjct: 665 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 724

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +S  L  A      MP +   S W AL+SAC  +GD +   +  E +++    PD     
Sbjct: 725 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE--LNPDDTGYY 782

Query: 482 SVLS 485
            ++S
Sbjct: 783 VLVS 786



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N V +N L+  Y K G +  + ++F +M  R  ++W  +I             ++   
Sbjct: 507 NSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 566

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MRT+G + PD  T  ++L  CS      +  ++H  I K G  S + + N L++ Y K  
Sbjct: 567 MRTEGVT-PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCG 625

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  + +VFK M  KD V++ ALI+     G  ++A++ F EM+  G  P    F A + 
Sbjct: 626 SLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIF 685

Query: 183 A 183
           A
Sbjct: 686 A 686



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 23/249 (9%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q  F+SI RA A  A+ +   +LHS +I  G   +V   + L+  YA       +   F+
Sbjct: 72  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 131

Query: 436 -EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
              P  N+  WN++I A   NG     L  + +  +   QPD+ +  SV++AC+      
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA------ 185

Query: 495 EGLQYFNSMTQKYKLRPKKEHYAS-------MVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            GL  F  M +    R     + S       ++D+ CR    D+A K+  +MP   D + 
Sbjct: 186 -GLLDF-EMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVS 242

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ---VKK 604
           W+S+I+    +    +  +A +  ++   L        MS++    G   SV +   +  
Sbjct: 243 WNSLISG---YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 299

Query: 605 AMRERGVRK 613
            + + G++K
Sbjct: 300 LIEKIGIKK 308


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/742 (37%), Positives = 433/742 (58%), Gaps = 5/742 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N L+  Y KSG++  AR +F+ M +R   SWT++IGG +Q  + +EAF LF+ M+ +G  
Sbjct: 359  NALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNG-C 417

Query: 70   DPDYVTFATLLSGCSEPDT-ANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             P+  T+ ++L+  +   T A E ++V H    + G+ S L I N+L+  Y K   +D A
Sbjct: 418  LPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDA 477

Query: 128  RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            R VF  M  +D +S+NA++ G A+ G   EA  +F++MQ  G  P   T+ + L+     
Sbjct: 478  RLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGST 537

Query: 188  ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
              +    +VH   V+T  + +  V +A + +Y +   + +AR LF ++      ++N MI
Sbjct: 538  DALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMI 597

Query: 248  TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
               A     +E+L LF ++Q   F      F  +LS   ++  L+  +++H+       +
Sbjct: 598  GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHA-TDAGL 656

Query: 308  SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             +++V N+LV  Y+KCG  + AK++F ++   +   WT MI    Q G   +A + F++M
Sbjct: 657  VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQM 716

Query: 368  CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
             R  I  D  T+ SIL A A   +L   K++H+  + +G +S++  G+AL+ MYAK GS+
Sbjct: 717  LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSI 776

Query: 428  KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             DA   F +M ER++ SW  +I   AQ+G     L  F  M   G++P+  S ++VL+AC
Sbjct: 777  DDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTAC 836

Query: 488  SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            SH GL++EG + F SMTQ Y + P  EHY  MVD+L R+G  +EAE  +  MP EPD+  
Sbjct: 837  SHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP 896

Query: 548  WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            W +++ +C  + NLE A+ AA +  K+ K + A+ YV +SNIYA  G+WE    V+  M+
Sbjct: 897  WGALLGACVTYGNLEMAEFAAKERLKL-KPKSASTYVLLSNIYAATGKWEQKLLVRSMMQ 955

Query: 608  ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
             +G+RK    SW+E+ +++H F   D  HP++ EI  ++ +L++ +K +GY PDT   L 
Sbjct: 956  RKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLR 1015

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            + D+E K ++L  HSE+LAI + L++T    PI V KNLR C+DCH A K ISKITGREI
Sbjct: 1016 NTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREI 1075

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
              RD+ RFHHFKDG CSC D+W
Sbjct: 1076 VARDAKRFHHFKDGVCSCGDYW 1097



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 183/699 (26%), Positives = 331/699 (47%), Gaps = 65/699 (9%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN    N L+  Y++ G L  AR++F+ ++ +    WT +IGGY++     +A +++  M
Sbjct: 151 QNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKM 210

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R + G  P+ +T+ ++L  C  P       ++HA II+ G+ S + +  +LV+ Y K   
Sbjct: 211 RQECGQ-PNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A+ +F +M +++ +S+  +I G A  G  +EA  LF++MQ  GF P+ +T+ + L+A
Sbjct: 270 IEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNA 329

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +   ++VH+  V      ++ V NAL+ +Y+K   + +AR +F  M E D  S+
Sbjct: 330 NASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSW 389

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL--SVVANKLDLQIGRQIHTQT 301
            VMI   A + + +E+  LF ++Q      +   + ++L  S +A+   L+  + +H   
Sbjct: 390 TVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHA 449

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                IS++++ N+L+ MYAKCG  ++A+ +F  +     + W AM+    Q G   EA 
Sbjct: 450 EEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAF 509

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +F++M +  +  D  T+ S+L       +L    ++H   + +G +S+   GSA + MY
Sbjct: 510 TVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMY 569

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            + GS+ DA   F ++  R++ +WNA+I   AQ    +  L  F  M + G+ PD+ + +
Sbjct: 570 IRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFI 629

Query: 482 SVLSA----------------------------------CSHCGLIEEGLQYFNSMTQKY 507
           ++LSA                                   S CG ++   Q F+ M ++ 
Sbjct: 630 NILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVER- 688

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFA 564
                   +  M+  L + GC  +A     QM  E   PD   + S++++C     LE+ 
Sbjct: 689 ----NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWV 744

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           K+  +       + D     A+ ++YA  G  +    V   M ER V     +SW     
Sbjct: 745 KEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV-----FSWT---- 795

Query: 625 KVHVFTANDELHPQTNEIRRKIENL--MQEMKKEGYKPD 661
              V       H       R +E L    +MK EG+KP+
Sbjct: 796 ---VMIGGLAQHG------RGLEALDFFVKMKSEGFKPN 825



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 289/596 (48%), Gaps = 46/596 (7%)

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
            + +R   G   D  ++  +L  C + +      QVH  IIK G    L + N L+  Y 
Sbjct: 105 MLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYI 164

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           +   L  AR+VF ++ +K+   +  +I G+A+ G  E+A++++ +M+    +P++ T+ +
Sbjct: 165 RCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLS 224

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A     ++  G+++HA ++++ F  +V V  AL+++Y K   + +A+ +F +M E +
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERN 284

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            +S+ VMI   A   + +E+  LF ++Q   F  + + + ++L+  A+   L+  +++H+
Sbjct: 285 VISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 344

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +      +++V N+LV MYAK G  ++A+ +F  ++      WT MI    Q G  +E
Sbjct: 345 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQE 404

Query: 360 ALNLFIEMCRANISADQATFASILRAS--AELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           A +LF++M R     +  T+ SIL AS  A  ++L   K +H     +GF+S++  G+AL
Sbjct: 405 AFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNAL 464

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MYAK GS+ DA   F  M +R+++SWNA++   AQNG        F  M Q G  PDS
Sbjct: 465 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDS 524

Query: 478 VSLLSVL-------------------------------SACSH----CGLIEEGLQYFNS 502
            + LS+L                               SA  H    CG I++    F+ 
Sbjct: 525 TTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDK 584

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHK 559
           ++ ++        + +M+    +  C  EA  L  QM    F PD   + +++++    +
Sbjct: 585 LSVRHVTT-----WNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEE 639

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
            LE+ K+          L D     A+ + Y+  G  +   QV   M ER V   T
Sbjct: 640 ALEWVKEVHSHATD-AGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWT 694



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 268/588 (45%), Gaps = 65/588 (11%)

Query: 140 VSFNALITGFAKEGLN----EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           V  NA + G A++  N    ++A+ +       G     F++   L   +   DI L +Q
Sbjct: 80  VCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQ 139

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH  ++K+   +N++VAN LL +Y +   +  AR++F ++ + +   +  MI  YA    
Sbjct: 140 VHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGH 199

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            +++++++ +++      ++  + ++L      ++L+ G++IH   I +   S+V+V  +
Sbjct: 200 AEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETA 259

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LV+MY KCG  E+A+ IF  +   + + WT MI      G  +EA +LF++M R     +
Sbjct: 260 LVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPN 319

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             T+ SIL A+A   +L   K++HS  + +G   ++  G+AL+ MYAKSGS+ DA   F 
Sbjct: 320 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 379

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-------- 487
            M ER+I SW  +I   AQ+G  Q     F  M ++G  P+  + LS+L+A         
Sbjct: 380 GMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL 439

Query: 488 -----------------------------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
                                        + CG I++    F+ M  +  +      + +
Sbjct: 440 EWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVIS-----WNA 494

Query: 519 MVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           M+  L ++GC  EA  +  QM  E   PD   + S++N+      LE+  +      +  
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
            + D     A  ++Y   G   S+   +    +  VR VT  +W  +             
Sbjct: 555 LISDFRVGSAFIHMYIRCG---SIDDARLLFDKLSVRHVT--TWNAMIGG---------- 599

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
                   R+  +L  +M++EG+ PD +  ++     +  E+L++  E
Sbjct: 600 -AAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKE 646


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/751 (37%), Positives = 439/751 (58%), Gaps = 33/751 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +I  Y  SG L  AR+LF     R+ ++W+ LI GY +     EA +LF
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+ +G   P+  T+ ++L  CS      +  Q+HA  IK  ++S   +   LVD Y K
Sbjct: 127 WEMQYEG-ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAK 185

Query: 121 IRCLDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +C+  A  +F+  P K + V + A++TG+++ G   +AI+ F +M+  G + + FTF +
Sbjct: 186 CKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPS 245

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++    G QVH  +V++ F  NVFV +AL+D+YSK   +  AR++   M   D
Sbjct: 246 ILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDD 305

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N MI         +E+L LFR +        +F + ++L+  +  +D++    +H+
Sbjct: 306 PVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHS 365

Query: 300 QTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             IV T     K V N+LVDMYAK G F+ A ++F  ++    + WT++++  V  G+ E
Sbjct: 366 -LIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 424

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF EM    I  DQ   A++L A AEL  L  GKQ+H+  ++SG  S++   ++L+
Sbjct: 425 EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLV 484

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MYAK G ++DA + F  M  +++++W ALI   AQNG  +                   
Sbjct: 485 SMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------------------- 525

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
                     H GL+E G  YF SM + Y ++P  EHYA M+D+L RSG   EA++L+ Q
Sbjct: 526 ---------DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQ 576

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           M  +PD  +W +++ +CR+H N+E  ++AA+ LF++E  ++A PYV +SN+Y+ AG+WE 
Sbjct: 577 MAVQPDATVWKALLAACRVHGNVELGERAANNLFELEP-KNAVPYVLLSNLYSAAGKWEE 635

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            ++ ++ M+ RGV K    SW+E+ SKVH F + D  HP+T EI  K++ +M  +K+ GY
Sbjct: 636 AAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGY 695

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            PD + ALHD DEE K   L YHSE+LA+AF L+  P G+PI + KNLR C DCH A+K 
Sbjct: 696 VPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKY 755

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +S +  R + +RDS+ FHHF++G CSC D+W
Sbjct: 756 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 226/495 (45%), Gaps = 65/495 (13%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L    L   +  FV     V +   +N +L   SK   V +ARKLF  MP+ D  S+N M
Sbjct: 19  LEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTM 78

Query: 247 ITCYA----WNEQYK---------------------------ESLKLFRELQFTRFDRSQ 275
           I  YA     NE  K                           E+L+LF E+Q+     +Q
Sbjct: 79  IGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQ 138

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA- 334
           F + ++L V +  + L+ G+QIH   I T   S   V   LVDMYAKC    EA+ +F  
Sbjct: 139 FTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFEL 198

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
                + V WTAM++ Y Q G+  +A+  F +M    I  +Q TF SIL A   +++   
Sbjct: 199 APDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGF 258

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G Q+H  ++RSGF +NVF GSAL+DMY+K G L +A +  + M   + VSWN++I  C +
Sbjct: 259 GAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVR 318

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYF--- 500
            G  +  L  F  M     + D  +  SVL+  S           H  +++ G + +   
Sbjct: 319 QGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLV 378

Query: 501 -NSMTQKYKLRPKKEH---------------YASMVDILCRSGCFDEAEKLMAQ---MPF 541
            N++   Y  R   ++               + S+V     +G ++EA +L  +   M  
Sbjct: 379 NNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGI 438

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            PD+I+ ++V+++C     LEF K+      K       +   ++ ++YA  G  E  ++
Sbjct: 439 HPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANK 498

Query: 602 VKKAMRERGVRKVTA 616
           V  +M  + V   TA
Sbjct: 499 VFDSMEIQDVITWTA 513



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 34/199 (17%)

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
           +L    L   +  FV   G + +    + +L   +K G + DA + F  MP+R+  SWN 
Sbjct: 18  QLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNT 77

Query: 448 LISACAQNG--------------------------------DAQATLKSFEDMVQSGYQP 475
           +I A A +G                                D +A L+ F +M   G +P
Sbjct: 78  MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEA-LELFWEMQYEGERP 136

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           +  +  SVL  CS   L+E+G Q  ++   K +          +VD+  +  C  EAE L
Sbjct: 137 NQFTWGSVLRVCSMYVLLEKGKQ-IHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 536 MAQMPFEPDEIMWSSVINS 554
               P + + ++W++++  
Sbjct: 196 FELAPDKRNHVLWTAMVTG 214


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/749 (37%), Positives = 436/749 (58%), Gaps = 57/749 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  ++VS N +ISGY+++G    AR LF+ M +R  VSW ++I GY +     +A +LF
Sbjct: 85  MPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 144

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + D  ++ T+LSG                                   Y +
Sbjct: 145 ERM-----PERDVCSWNTILSG-----------------------------------YAQ 164

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+D ARRVF  MP+K+ VS+NAL++ + +    EEA  LF   ++        ++   
Sbjct: 165 NGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL----VSWNCL 220

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   V    I   RQ       +  V +V   N ++  Y+++  + EAR+LF E P  D 
Sbjct: 221 LGGFVKKKKIVEARQF----FDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV 276

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++  M++ Y  N   +E+ +LF  +     +R++  ++ +L+       +++ +++   
Sbjct: 277 FTWTAMVSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFD- 331

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                    V   N+++  YA+CG+  EAK +F  +     V W AMI+ Y Q G+  EA
Sbjct: 332 ---VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEA 388

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF+ M R     ++++F+S L   A++ +L LGKQLH  +++ G+ +  F G+ALL M
Sbjct: 389 LRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 448

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K GS+++A   FKEM  ++IVSWN +I+  +++G  +  L+ FE M + G +PD  ++
Sbjct: 449 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATM 508

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           ++VLSACSH GL+++G QYF++MTQ Y +RP  +HYA MVD+L R+G  +EA  LM  MP
Sbjct: 509 VAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMP 568

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPD  +W +++ + R+H N E A+ AAD++F ME   ++  YV +SN+YA +G+W  V 
Sbjct: 569 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP-ENSGMYVLLSNLYASSGRWGDVG 627

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  MR++GV+KV  YSW+E+++K H F+  DE HP+ +EI   +E+L   MKK GY  
Sbjct: 628 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVS 687

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
            TS  LHD +EE K   ++YHSERLA+A+ ++    G PI V+KNLR C DCH AIK ++
Sbjct: 688 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 747

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K+TGR I +RD++RFHHFKDG CSC D+W
Sbjct: 748 KVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 49/327 (14%)

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            T+ +  +  S++K  N  +  Y + GR  EA  +F  +   S+V + AMIS Y++ G  
Sbjct: 47  QTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEF 106

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E A  LF EM   ++ +        +R      + +LGK    F        +V S + +
Sbjct: 107 ELARMLFDEMPERDLVSWNVMIKGYVR------NRNLGKARELFERMP--ERDVCSWNTI 158

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQ 474
           L  YA++G + DA + F  MPE+N VSWNAL+SA  QN    +A     S E+     + 
Sbjct: 159 LSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWN 218

Query: 475 ------------------------PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
                                    D VS  ++++  +  G I+E  Q F+         
Sbjct: 219 CLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE-------S 271

Query: 511 PKKE--HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           P  +   + +MV    ++   +EA +L  +MP E +E+ W++++      + +E AK   
Sbjct: 272 PVHDVFTWTAMVSGYIQNRMVEEARELFDRMP-ERNEVSWNAMLAGYVQGERVEMAK--- 327

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
            +LF +   R+ + +  M   YA  G+
Sbjct: 328 -ELFDVMPCRNVSTWNTMITGYAQCGK 353


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/674 (39%), Positives = 411/674 (60%), Gaps = 1/674 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  LL  C+   +  +  +VHA I+K G      + N+L+  Y K   L  ARRVF  + 
Sbjct: 99  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            ++ VS+ A+I  F     N EA K +  M+  G KP   TF + L+A      + +G++
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH  + K        V  +L+ +Y+K   + +A+ +F ++PE + V++ ++I  YA   Q
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
              +L+L  ++Q      ++  ++++L      L L+ G+++H   I +    E+ V N+
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ MY KCG  +EA+++F +L H   V WTAM++ Y Q G  +EA++LF  M +  I  D
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + TF S L + +  A L  GK +H  ++ +G+  +V+  SAL+ MYAK GS+ DA   F 
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           +M ERN+V+W A+I+ CAQ+G  +  L+ FE M + G +PD V+  SVLSAC+H GL+EE
Sbjct: 459 QMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEE 518

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G ++F SM   Y ++P  EHY+  VD+L R+G  +EAE ++  MPF+P   +W +++++C
Sbjct: 519 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSAC 578

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
           RIH ++E  ++AA+ + K++   D A YVA+SNIYA AG++E   +V++ M +R V K  
Sbjct: 579 RIHSDVERGERAAENVLKLDPDDDGA-YVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEP 637

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             SW+E+  KVHVF   D+ HP+  EI  ++  L +++K++GY PDT   LHD DEE KV
Sbjct: 638 GQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKV 697

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
           ++L  HSERLAI + L+ TP G+PI ++KNLR C DCH A K ISK+ GREI  RD+ RF
Sbjct: 698 QTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRF 757

Query: 736 HHFKDGFCSCRDFW 749
           HHF DG CSC DFW
Sbjct: 758 HHFVDGVCSCGDFW 771



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 254/483 (52%), Gaps = 5/483 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+S Y K G+L  AR +F+ + DR  VSWT +I  +   NQ  EA+K +  M+
Sbjct: 130 NRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMK 189

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD VTF +LL+  + P+      +VH +I K G      +  SLV  Y K   +
Sbjct: 190 L-AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDI 248

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F ++P+K+ V++  LI G+A++G  + A++L  +MQ     P+  T+ + L   
Sbjct: 249 SKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGC 308

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G++VH +++++ +   ++V NAL+ +Y K   + EARKLFG++P  D V++ 
Sbjct: 309 TTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWT 368

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+T YA    + E++ LFR +Q       +  F++ L+  ++   LQ G+ IH Q +  
Sbjct: 369 AMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHA 428

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +V + ++LV MYAKCG  ++A+ +F  +S  + V WTAMI+   Q G   EAL  F
Sbjct: 429 GYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYF 488

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            +M +  I  D+ TF S+L A   +  +  G K   S  +  G    V   S  +D+  +
Sbjct: 489 EQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 548

Query: 424 SGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G L++A      MP +   S W AL+SAC  + D +   ++ E++++    PD      
Sbjct: 549 AGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLK--LDPDDDGAYV 606

Query: 483 VLS 485
            LS
Sbjct: 607 ALS 609



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 233/445 (52%), Gaps = 8/445 (1%)

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           D+++ +  ++   K+G  +EA+ +   M   G +     F   L     L  +  GR+VH
Sbjct: 60  DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
           A ++K+    N ++ N LL +Y+K   + +AR++F  + + + VS+  MI  +    Q  
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E+ K +  ++       +  F +LL+   N   LQ+G+++H +        E +V  SLV
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLV 239

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MYAKCG   +A+ IF  L   + V WT +I+ Y Q+G ++ AL L  +M +A ++ ++ 
Sbjct: 240 GMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKI 299

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T+ SIL+      +L  GK++H ++I+SG+   ++  +AL+ MY K G LK+A + F ++
Sbjct: 300 TYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL 359

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P R++V+W A+++  AQ G     +  F  M Q G +PD ++  S L++CS    ++EG 
Sbjct: 360 PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGK 419

Query: 498 QYFNSMTQK-YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC- 555
                +    Y L    +  +++V +  + G  D+A  +  QM  E + + W+++I  C 
Sbjct: 420 SIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCA 476

Query: 556 ---RIHKNLEFAKKAADQLFKMEKL 577
              R  + LE+ ++   Q  K +K+
Sbjct: 477 QHGRCREALEYFEQMKKQGIKPDKV 501



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 51/362 (14%)

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           A    + T+  +  +S   ++G L+EAL +   M           F  +L+  A L SL 
Sbjct: 54  AGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLE 113

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+++H+ +++SG   N +  + LL MYAK GSL DA + F  + +RNIVSW A+I A  
Sbjct: 114 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFV 173

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
                    K +E M  +G +PD V+ +S+L+A ++  L++ G Q  +    K  L  + 
Sbjct: 174 AGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVG-QKVHMEIAKAGLELEP 232

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMP--------------------------------- 540
               S+V +  + G   +A+ +  ++P                                 
Sbjct: 233 RVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQA 292

Query: 541 -FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
              P++I ++S++  C     LE  KK    + +    R+     A+  +Y   G  +  
Sbjct: 293 EVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEA 352

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            ++   +  R V      +W  + +       +DE             +L + M+++G K
Sbjct: 353 RKLFGDLPHRDV-----VTWTAMVTGYAQLGFHDE-----------AIDLFRRMQQQGIK 396

Query: 660 PD 661
           PD
Sbjct: 397 PD 398


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/738 (38%), Positives = 423/738 (57%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LIS + K  ++  A  +F  +  +  V +  ++ GY++ +  R+A + +  MR D    P
Sbjct: 82  LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDE-VMP 140

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL    E        ++H  +I  G+ S L    ++V+ Y K R ++ A ++F
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + MPQ+D VS+N ++ G+A+ G    A+++ ++MQ  G KP   T  + L A   L  + 
Sbjct: 201 ERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +GR +H +  +  F   V VA A+LD Y K   V  AR +F  M   + VS+N MI  YA
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYA 320

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N + +E+   F ++     + +       L   AN  DL+ GR +H          +V 
Sbjct: 321 QNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS 380

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY+KC R + A  +F NL H + V W AMI  Y Q G + EALNLF EM   +
Sbjct: 381 VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD 440

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D  T  S++ A A+L+     K +H   IR+    NVF  +AL+D +AK G+++ A 
Sbjct: 441 IKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTAR 500

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M ER++++WNA+I     NG  +  L  F +M     +P+ ++ LSV++ACSH G
Sbjct: 501 KLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSG 560

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG+ YF SM + Y L P  +HY +MVD+L R+G  D+A K +  MP +P   +  ++
Sbjct: 561 LVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAM 620

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CRIHKN+E  +K AD+LF ++   D   +V ++N+YA A  W+ V++V+ AM ++G+
Sbjct: 621 LGACRIHKNVELGEKTADELFDLDP-DDGGYHVLLANMYASASMWDKVARVRTAMEKKGI 679

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    S VEL+++VH F +    HPQ+  I   +E L  EMK  GY PDT+ ++HD +E
Sbjct: 680 QKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTN-SIHDVEE 738

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           ++K + L  HSERLAIAF L+NT  G+ I + KNLR C DCH A K IS +TGREI VRD
Sbjct: 739 DVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRD 798

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC D+W
Sbjct: 799 LRRFHHFKNGICSCGDYW 816



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 233/469 (49%), Gaps = 9/469 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  +   +++ Y K   +  A ++F  M  R  VSW  ++ GY+Q    R A ++ + M+
Sbjct: 176 NLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQ 235

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD +T  ++L   ++         +H    + G+  ++ +  +++D+Y K   +
Sbjct: 236 -EAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSV 294

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR VFK M  ++ VS+N +I G+A+ G +EEA   F++M   G +P++ +   AL A 
Sbjct: 295 RSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHAC 354

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+  GR VH  + +     +V V N+L+ +YSK   V  A  +FG +     V++N
Sbjct: 355 ANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWN 414

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---IHTQT 301
            MI  YA N    E+L LF E+Q        F   TL+SV+    DL + RQ   IH   
Sbjct: 415 AMILGYAQNGCVNEALNLFCEMQSHDIKPDSF---TLVSVITALADLSVTRQAKWIHGLA 471

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I T     V V  +L+D +AKCG  + A+++F  +     + W AMI  Y   G+  EAL
Sbjct: 472 IRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREAL 531

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDM 420
           +LF EM   ++  ++ TF S++ A +    +  G     S     G    +    A++D+
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDL 591

Query: 421 YAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDM 468
             ++G L DA +  ++MP +  I    A++ AC  + + +   K+ +++
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADEL 640



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 228/504 (45%), Gaps = 57/504 (11%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+   ++K  F         L+ L+ K + + EA ++F  +     V Y+ M+  YA N 
Sbjct: 62  QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNS 121

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             +++++ +  ++        + F+ LL +    LDL+ GR+IH   I     S +    
Sbjct: 122 TLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMT 181

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           ++V++YAKC + E+A ++F  +     V W  +++ Y Q G    A+ + ++M  A    
Sbjct: 182 AVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKP 241

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  S+L A A+L +L +G+ +H +  R+GF   V   +A+LD Y K GS++ A   F
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF 301

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           K M  RN+VSWN +I   AQNG+++    +F  M+  G +P +VS++  L AC++ G +E
Sbjct: 302 KGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLE 361

Query: 495 EG---------------LQYFNSMTQKYKLRPKKEHYAS---------------MVDILC 524
            G               +   NS+   Y    + +  AS               M+    
Sbjct: 362 RGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYA 421

Query: 525 RSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAA-DQLFKMEKLRDA 580
           ++GC +EA  L  +M     +PD     SVI +     +L   ++A       +  L D 
Sbjct: 422 QNGCVNEALNLFCEMQSHDIKPDSFTLVSVITAL---ADLSVTRQAKWIHGLAIRTLMDK 478

Query: 581 APYV--AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP- 637
             +V  A+ + +A  G  ++  ++   M+ER                 HV T N  +   
Sbjct: 479 NVFVCTALIDTHAKCGAIQTARKLFDLMQER-----------------HVITWNAMIDGY 521

Query: 638 QTNEIRRKIENLMQEMKKEGYKPD 661
            TN   R+  +L  EM+    KP+
Sbjct: 522 GTNGHGREALDLFNEMQNGSVKPN 545



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 2/147 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N      LI  + K G + TAR+LF+ M +R  ++W  +I GY      REA  LF +
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+ +G   P+ +TF ++++ CS      E +     + + +G    +    ++VD   + 
Sbjct: 537 MQ-NGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRA 595

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITG 148
             LD A +  ++MP K  ++    + G
Sbjct: 596 GRLDDAWKFIQDMPVKPGITVLGAMLG 622


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 282/753 (37%), Positives = 451/753 (59%), Gaps = 10/753 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N +IS YV  G L  ARELF+    +++++W+ +I GY +     EAF LF
Sbjct: 91  MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR +G     + T  ++L  CS          +H  ++K G+   + +   LVD Y K
Sbjct: 151 RSMRLEGWKASQF-TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAK 209

Query: 121 IRCLDLARRVFK--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            +C+  A  +FK  E  +K+ V + A++TG+A+ G   +A++ F  M   G + + +TF 
Sbjct: 210 CKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFP 269

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             L+A   +     G QVH F+VK+ F  NV+V +AL+D+Y+K   +  A+ +   M + 
Sbjct: 270 TILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDD 329

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQF--TRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           D VS+N ++  +  +   +E+L+LF+ +     + D   FP S L   V   ++    + 
Sbjct: 330 DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFP-SVLNCCVVGSIN---PKS 385

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H   I T   +   V+N+LVDMYAK G  + A  +F  +     + WT++++ Y Q  +
Sbjct: 386 VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 445

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EE+L +F +M    ++ DQ   ASIL A AEL  L  GKQ+H   I+SG   +    ++
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MYAK G L DA   F  M  +++++W A+I   AQNG  + +LK ++ MV SG +PD
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ + +L ACSH GL++EG +YF  M + Y ++P  EHYA M+D+  RSG  DEA++L+
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            QM  +PD  +W S++++CR+H+NLE A++AA  LF++E + +A PYV +SN+Y+ + +W
Sbjct: 626 DQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPM-NAMPYVMLSNMYSASRKW 684

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
             V++++K M+ +G+ K    SW+E+ S+V+ F ++D  HP+  EI  KI+ ++  +K+ 
Sbjct: 685 NDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEA 744

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PD S +LHD D+E K   L YHSE+LA+AF L+  P  +PI + KNLR C DCH+A+
Sbjct: 745 GYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAM 804

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K IS++  R I +RDS+ FHHF++G CSC D+W
Sbjct: 805 KYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 242/474 (51%), Gaps = 37/474 (7%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT------------------------ 147
           N L++   K   ++ AR++F +MPQKD  S+N +I+                        
Sbjct: 69  NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128

Query: 148 -------GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
                  G+ K G   EA  LF  M+  G+K S FT  + L     L  I  G  +H FV
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKE 258
           VK  F  NVFV   L+D+Y+K  CV EA  LF   E    + V +  M+T YA N    +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +++ FR +     + +Q+ F T+L+  ++ L    G Q+H   + +   S V V ++LVD
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVD 308

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG  + AK +   +     V W +++  +V+ G  EEAL LF  M   N+  D  T
Sbjct: 309 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F S+L     + S++  K +H  +I++GF +     +AL+DMYAK+G +  A   F++M 
Sbjct: 369 FPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKML 426

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           E++++SW +L++  AQN   + +LK F DM  +G  PD   + S+LSAC+   L+E G Q
Sbjct: 427 EKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQ 486

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                  K  LR  +  Y S+V +  + GC D+A+ +   M  + D I W+++I
Sbjct: 487 VHLDFI-KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 538



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 57/407 (14%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +A  R +H     +   E+++  N LL+  SK   V +ARKLF +MP+ D  S+N MI+ 
Sbjct: 48  MAFLRSIHTTTAAS--YESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISS 105

Query: 250 YA-------WNEQYK------------------------ESLKLFRELQFTRFDRSQFPF 278
           Y          E +                         E+  LFR ++   +  SQF  
Sbjct: 106 YVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTL 165

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-- 336
            ++L V ++   +Q G  IH   +       V V   LVDMYAKC    EA+ +F  L  
Sbjct: 166 GSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEF 225

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
              + V WTAM++ Y Q G+  +A+  F  M    +  +Q TF +IL A + + +   G+
Sbjct: 226 DRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGE 285

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+H F+++SGF SNV+  SAL+DMYAK G LK+A    + M + ++VSWN+L+    ++G
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSAC---------SHCGLIEEGLQYFNSMTQKY 507
             +  L+ F++M     + D  +  SVL+ C          H  +I+ G        + Y
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGF-------ENY 398

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           KL        ++VD+  ++G  D A  +  +M  E D I W+S++  
Sbjct: 399 KLVSN-----ALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTG 439


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/742 (37%), Positives = 436/742 (58%), Gaps = 3/742 (0%)

Query: 9   TNMLISGYVKSGNLATARELFN-SMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +F+ +  +R AVSW  L+  Y + +Q  +A ++F +M   G
Sbjct: 45  ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 104

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P    F+ +++ C+     +   QVHA +++ GY   +   N+LVD Y K+  +D+A
Sbjct: 105 -IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 163

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F++MP  D VS+NALI+G    G +  AI+L ++M+  G  P+ F  ++ L A  G 
Sbjct: 164 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 223

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               LGRQ+H F++K N   + ++   L+D+Y+K+  + +A K+F  M   D + +N +I
Sbjct: 224 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 283

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +   ++ E+  +F  L+      ++   + +L   A+       RQ+H        I
Sbjct: 284 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI 343

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N L+D Y KC    +A  +F   S    +  T+MI+A  Q  + E A+ LF+EM
Sbjct: 344 FDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEM 403

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +  D    +S+L A A L++   GKQ+H+ +I+  FMS+ F+G+AL+  YAK GS+
Sbjct: 404 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 463

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +PER +VSW+A+I   AQ+G  +  L+ F  MV  G  P+ +++ SVL AC
Sbjct: 464 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 523

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL++E  +YFNSM + + +   +EHY+ M+D+L R+G  D+A +L+  MPF+ +  +
Sbjct: 524 NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASV 583

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ + R+HK+ E  K AA++LF +E  + +  +V ++N YA +G W  V++V+K M+
Sbjct: 584 WGALLGASRVHKDPELGKLAAEKLFILEPEK-SGTHVLLANTYASSGMWNEVAKVRKLMK 642

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +  ++K  A SWVE+K KVH F   D+ HP T EI  K++ L   M K GY P+    LH
Sbjct: 643 DSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLH 702

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D D   K   L +HSERLA+AFAL++TP G+PI V KNLR C DCH A K IS I  REI
Sbjct: 703 DLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREI 762

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+DG CSC D+W
Sbjct: 763 IIRDINRFHHFRDGTCSCGDYW 784



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 219/458 (47%), Gaps = 3/458 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++  + N L+  YVK G +  A  +F  M D   VSW  LI G         A +L + M
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           ++ G   P+    +++L  C+     +   Q+H  +IK   +S   I   LVD Y K   
Sbjct: 202 KSSGLV-PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A +VF  M  +D + +NALI+G +  G ++EA  +F  ++  G   +  T AA L +
Sbjct: 261 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L   +  RQVHA   K  F+ +  V N L+D Y K  C+ +A ++F E    D ++ 
Sbjct: 321 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 380

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MIT  +  +  + ++KLF E+     +   F  S+LL+  A+    + G+Q+H   I 
Sbjct: 381 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 440

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              +S+    N+LV  YAKCG  E+A+  F++L     V W+AMI    Q G+ + AL L
Sbjct: 441 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 500

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M    I+ +  T  S+L A      +   K+  +S     G        S ++D+  
Sbjct: 501 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 560

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++G L DA++    MP + N   W AL+ A   + D +
Sbjct: 561 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 598



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 237/509 (46%), Gaps = 50/509 (9%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-PEVDGVSYNV 245
           + D  LG QVHA  + T F  +VFVANAL+ +Y     + +AR++F E   E + VS+N 
Sbjct: 20  VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +++ Y  N+Q  +++++F E+ ++    ++F FS +++      ++  GRQ+H   +   
Sbjct: 80  LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +V  AN+LVDMY K GR + A  IF  +     V W A+IS  V  G+   A+ L +
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 199

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M  + +  +    +SIL+A A   +  LG+Q+H F+I++   S+ + G  L+DMYAK+ 
Sbjct: 200 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNH 259

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL- 484
            L DA++ F  M  R+++ WNALIS C+  G        F  + + G   +  +L +VL 
Sbjct: 260 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319

Query: 485 --------SACSHCGLIEEGLQYF------NSMTQKY--------KLRPKKE-------H 515
                   SA      + E + +       N +   Y         +R  +E        
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 379

Query: 516 YASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             SM+  L +    + A KL  +M     EPD  + SS++N+C      E  K+    L 
Sbjct: 380 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           K + + DA    A+   YA  G  E       ++ ERGV      SW  +   +      
Sbjct: 440 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV-----VSWSAMIGGL------ 488

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                Q    +R +E L   M  EG  P+
Sbjct: 489 ----AQHGHGKRALE-LFGRMVDEGINPN 512


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/746 (38%), Positives = 430/746 (57%), Gaps = 11/746 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDR--TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           L+  Y+    L  AR +F+ M  R    V W +LI  Y+    + EA  L+  M    G 
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM-LGYGI 115

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF  +L  CS    A+E  ++H DI +    S + +  +LVD Y K  CLD A+ 
Sbjct: 116 TPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175

Query: 130 VFKEMPQKDSVSFNALITGFA-KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           VF +M ++D V++N++I+GF+  EG  +E  +L V+MQ+    P+  T    L A   + 
Sbjct: 176 VFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVN 234

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMI 247
            +  G+++H F V+  FV +V V   +LD+Y K  C+  AR++F  M  V + V+++ M+
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294

Query: 248 TCYAWNEQYKESLKLFRELQFTRFD---RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             Y   +  +E+L+LF +L   + D    S    +T++ V AN  DL  G  +H   I +
Sbjct: 295 GAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS 354

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + ++ V N+L+ MYAKCG    A   F  +     V +TA+IS YVQ GN EE L +F
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +EM  + I+ ++AT AS+L A A LA L  G   H + I  GF ++    +AL+DMYAK 
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  A + F  M +R IVSWN +I A   +G     L  F++M   G +PD V+ + ++
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLI 534

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACSH GL+ EG  +FN+MTQ + + P+ EHYA MVD+L R+G F E    + +MP EPD
Sbjct: 535 SACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPD 594

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W +++++CR++KN+E  +  + ++ K+        +V +SN+Y+  G+W+  +QV+ 
Sbjct: 595 VRVWGALLSACRVYKNVELGEGVSKKIQKLGP-ESTGNFVLLSNMYSAVGRWDDAAQVRF 653

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             +E+G  K    SW+E+   VH F       HPQ  +I  K++ L+ EMK+ GY+ ++S
Sbjct: 654 TQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESS 713

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
               D +EE K   L YHSE+LAIAF +++      I+V KNLR C DCH AIK IS +T
Sbjct: 714 YVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVT 773

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            R+ITVRD+SRFHHFKDG C+C DFW
Sbjct: 774 KRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 229/455 (50%), Gaps = 9/455 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYS-QKNQFREAFKLFVDM 63
           N   +  L+  Y K G L  A+E+F+ M  R  V+W  +I G+S  +  + E  +L V M
Sbjct: 153 NVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM 212

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + D    P+  T   +L   ++ ++     ++H   ++ G+   +++   ++D Y K +C
Sbjct: 213 QND--VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQC 270

Query: 124 LDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG---FKPSDFTFAA 179
           +D ARR+F  M   K+ V+++A++  +       EA++LF ++  L       S  T A 
Sbjct: 271 IDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLAT 330

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            +     L D++ G  +H + +K+ FV ++ V N LL +Y+K   +  A + F EM   D
Sbjct: 331 VIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRD 390

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+  +I+ Y  N   +E L++F E+Q +  +  +   +++L   A+   L  G   H 
Sbjct: 391 AVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHC 450

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I+    ++  + N+L+DMYAKCG+ + A+++F  +     V W  MI AY   G   E
Sbjct: 451 YAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLE 510

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALL 418
           AL LF  M    +  D  TF  ++ A +    ++ GK   + + +  G +  +   + ++
Sbjct: 511 ALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMV 570

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           D+ +++G  K+     ++MP E ++  W AL+SAC
Sbjct: 571 DLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSAC 605


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/742 (37%), Positives = 436/742 (58%), Gaps = 3/742 (0%)

Query: 9   TNMLISGYVKSGNLATARELFN-SMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +F+ +  +R AVSW  L+  Y + +Q  +A ++F +M    
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM-VWS 196

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P    F+ +++ C+     +   QVHA +++ GY   +   N+LVD Y K+  +D+A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 256

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F++MP  D VS+NALI+G    G +  AI+L ++M+  G  P+ F  ++ L A  G 
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               LGRQ+H F++K N   + ++   L+D+Y+K+  + +A K+F  M   D + +N +I
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 376

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  +   ++ E+  +F  L+      ++   + +L   A+       RQ+H        I
Sbjct: 377 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI 436

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N L+D Y KC    +A  +F   S    +  T+MI+A  Q  + E A+ LF+EM
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEM 496

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +  D    +S+L A A L++   GKQ+H+ +I+  FMS+ F+G+AL+  YAK GS+
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSI 556

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA   F  +PER +VSW+A+I   AQ+G  +  L+ F  MV  G  P+ +++ SVL AC
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCAC 616

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL++E  +YFNSM + + +   +EHY+ M+D+L R+G  D+A +L+  MPF+ +  +
Sbjct: 617 NHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASV 676

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ + R+HK+ E  K AA++LF +E  + +  +V ++N YA +G W  V++V+K M+
Sbjct: 677 WGALLGASRVHKDPELGKLAAEKLFILEPEK-SGTHVLLANTYASSGMWNEVAKVRKLMK 735

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +  ++K  A SWVE+K KVH F   D+ HP T EI  K++ L   M K GY P+    LH
Sbjct: 736 DSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLH 795

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D D   K   L +HSERLA+AFAL++TP G+PI V KNLR C DCH A K IS I  REI
Sbjct: 796 DLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREI 855

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHF+DG CSC D+W
Sbjct: 856 IIRDINRFHHFRDGTCSCGDYW 877



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 175/602 (29%), Positives = 285/602 (47%), Gaps = 55/602 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +HA+++K G+ + L   N L+  Y K R    ARRVF E+P    VS+++L+T ++  G
Sbjct: 25  HLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNG 82

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L   AI+ F  M+  G   ++F     L     + D  LG QVHA  + T F  +VFVAN
Sbjct: 83  LPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVAN 139

Query: 214 ALLDLYSKHDCVVEARKLFGEM-PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           AL+ +Y     + +AR++F E   E + VS+N +++ Y  N+Q  +++++F E+ ++   
Sbjct: 140 ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F FS +++      ++  GRQ+H   +      +V  AN+LVDMY K GR + A  I
Sbjct: 200 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 259

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +     V W A+IS  V  G+   A+ L ++M  + +  +    +SIL+A A   + 
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 319

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG+Q+H F+I++   S+ + G  L+DMYAK+  L DA++ F  M  R+++ WNALIS C
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 379

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL---------SACSHCGLIEEGLQYF--- 500
           +  G        F  + + G   +  +L +VL         SA      + E + +    
Sbjct: 380 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA 439

Query: 501 ---NSMTQKY--------KLRPKKE-------HYASMVDILCRSGCFDEAEKLMAQM--- 539
              N +   Y         +R  +E          SM+  L +    + A KL  +M   
Sbjct: 440 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK 499

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  + SS++N+C      E  K+    L K + + DA    A+   YA  G  E  
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDA 559

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
                ++ ERGV      SW  +   +           Q    +R +E L   M  EG  
Sbjct: 560 ELAFSSLPERGV-----VSWSAMIGGL----------AQHGHGKRALE-LFGRMVDEGIN 603

Query: 660 PD 661
           P+
Sbjct: 604 PN 605



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 219/458 (47%), Gaps = 3/458 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++  + N L+  YVK G +  A  +F  M D   VSW  LI G         A +L + M
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           ++  G  P+    +++L  C+     +   Q+H  +IK   +S   I   LVD Y K   
Sbjct: 295 KSS-GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A +VF  M  +D + +NALI+G +  G ++EA  +F  ++  G   +  T AA L +
Sbjct: 354 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L   +  RQVHA   K  F+ +  V N L+D Y K  C+ +A ++F E    D ++ 
Sbjct: 414 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAV 473

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MIT  +  +  + ++KLF E+     +   F  S+LL+  A+    + G+Q+H   I 
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              +S+    N+LV  YAKCG  E+A+  F++L     V W+AMI    Q G+ + AL L
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M    I+ +  T  S+L A      +   K+  +S     G        S ++D+  
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++G L DA++    MP + N   W AL+ A   + D +
Sbjct: 654 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 691



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 49/317 (15%)

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T +  L   A   +L  G  LH+ +++SGF++++   + L+  Y+K      A + F E
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDE 62

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE- 495
           +P+   VSW++L++A + NG  ++ +++F  M   G   +  +L  VL       L  + 
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQV 122

Query: 496 ---------GLQYF--NSMTQKY-------KLRPKKEHYASMVDILCRSG---------- 527
                    G   F  N++   Y         R   +   S  + +  +G          
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQ 182

Query: 528 CFDEAEKL--MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           C D  +    M     +P E  +S V+N+C   +N++  ++    + +M   +D     A
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANA 242

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           + ++Y   G+ +  S + + M +  V      SW  L S   V   +D          R 
Sbjct: 243 LVDMYVKMGRVDIASVIFEKMPDSDV-----VSWNALISGC-VLNGHDH---------RA 287

Query: 646 IENLMQEMKKEGYKPDT 662
           IE L+Q MK  G  P+ 
Sbjct: 288 IELLLQ-MKSSGLVPNV 303


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/738 (37%), Positives = 429/738 (58%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + K G+L  A  +F  + D+    +  ++ GY++ +   +A   F  MR DG   P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDG-VRP 173

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL  C +     +  ++H  +I  G+ S +     +V+ Y K R ++ A ++F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP++D V +N +I+G+A+ G  + A++L + MQ  G +P   T  + L A   +  + 
Sbjct: 234 DRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLR 293

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +GR +H + ++  F   V V+ AL+D+YSK   V  AR +F  M     VS+N MI  Y 
Sbjct: 294 IGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYV 353

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N     ++++F+++   + + +       L   A+  D++ GR +H         S+V 
Sbjct: 354 QNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVS 413

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY+KC R + A EIF NL H + V W AMI  Y Q G + EA++ F +M   N
Sbjct: 414 VMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN 473

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D  T  S++ A AEL+ L   K +H  VIR+    NVF  +AL+DMYAK G++  A 
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTAR 533

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M ER++ +WNA+I     +G  +A L+ FE M +   +P+ V+ L VLSACSH G
Sbjct: 534 KLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSG 593

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG QYF SM + Y L P  +HY +MVD+L R+   +EA   + +MP EP   ++ ++
Sbjct: 594 LVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAM 653

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CRIHKN+E  +KAA+++F ++   D   +V ++NIYA A  W+ V++V+  M ++G+
Sbjct: 654 LGACRIHKNVELGEKAANRIFDLDP-DDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K   +S VEL+++VH F +    HPQ  +I   +E L   +K  GY PDT+ ++HD ++
Sbjct: 713 QKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTN-SVHDVED 771

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
            +K + L  HSE+LAIAF+L+NT  G+ I + KNLR C DCH A K IS +T REI VRD
Sbjct: 772 VVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRD 831

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFKDG CSC D+W
Sbjct: 832 MRRFHHFKDGTCSCGDYW 849



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 246/501 (49%), Gaps = 10/501 (1%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           A LL  C+   +  EL Q    IIK G  S  +    LV  +CK   L  A RVF+ +  
Sbjct: 81  AILLELCT---SMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIED 137

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K    ++ ++ G+A+    ++A+  F  M++ G +P  + F   L      AD+  G+++
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  ++   F  NVF    ++++Y+K   V EA K+F  MPE D V +N +I+ YA N   
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG 257

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           K +L+L   +Q            ++L  VA+   L+IGR IH  ++     S V V+ +L
Sbjct: 258 KTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTAL 317

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VDMY+KCG    A+ IF  ++  + V W +MI  YVQ G+   A+ +F +M    +    
Sbjct: 318 VDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTN 377

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T    L A A+L  +  G+ +H  + +    S+V   ++L+ MY+K   +  A + F+ 
Sbjct: 378 VTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFEN 437

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  + +VSWNA+I   AQNG     +  F  M     +PDS +++SV+ A +   ++ + 
Sbjct: 438 LQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            ++ + +  +  L        ++VD+  + G    A KL   M  E     W+++I+   
Sbjct: 498 -KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYG 555

Query: 557 IHKNLEFAKKAADQLF-KMEK 576
            H       KAA +LF KM+K
Sbjct: 556 THG----LGKAALELFEKMKK 572



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 216/450 (48%), Gaps = 3/450 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  +   +++ Y K   +  A ++F+ M +R  V W  +I GY+Q    + A +L + M+
Sbjct: 209 NVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQ 268

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD +T  ++L   ++  +      +H   ++ G+ S + +  +LVD Y K   +
Sbjct: 269 EE-GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSV 327

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR +F  M  K  VS+N++I G+ + G    A+++F +M     + ++ T   AL A 
Sbjct: 328 GTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHAC 387

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+  GR VH  + +     +V V N+L+ +YSK   V  A ++F  +     VS+N
Sbjct: 388 ADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWN 447

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  YA N +  E++  F ++Q        F   +++  +A    L   + IH   I T
Sbjct: 448 AMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRT 507

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                V VA +LVDMYAKCG    A+++F  +       W AMI  Y   G  + AL LF
Sbjct: 508 CLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELF 567

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M +  I  ++ TF  +L A +    +  G Q    + +  G    +    A++D+  +
Sbjct: 568 EKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGR 627

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  L +A    ++MP E  I  + A++ AC
Sbjct: 628 ANRLNEAWDFIQKMPIEPAISVFGAMLGAC 657



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 55/373 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +  VS N +I GYV++G+   A E+F  M+D                          
Sbjct: 337 MTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQ------------------------ 372

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V+M          VT    L  C++     +   VH  + +    S + + NSL+  Y K
Sbjct: 373 VEMTN--------VTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSK 424

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +D+A  +F+ +  K  VS+NA+I G+A+ G   EAI  F +MQ    KP  FT  + 
Sbjct: 425 CKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSV 484

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + A   L+ +   + +H  V++T   +NVFVA AL+D+Y+K   V  ARKLF  M E   
Sbjct: 485 IPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHV 544

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++N MI  Y  +   K +L+LF +++      ++  F  +LS  ++   ++ G Q    
Sbjct: 545 TTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGS 604

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                 +   +    ++VD+  +  R  EA              W      ++QK  +E 
Sbjct: 605 MKKDYGLEPAMDHYGAMVDLLGRANRLNEA--------------WD-----FIQKMPIEP 645

Query: 360 ALNLFIEM---CR 369
           A+++F  M   CR
Sbjct: 646 AISVFGAMLGACR 658


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/743 (39%), Positives = 459/743 (61%), Gaps = 3/743 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N+L++ YV  G L  A +LF+ M     VS+  L  G+S+ +QF+ A +L + +  +G
Sbjct: 40  AQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREG 99

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                +V F TLL      D A+  + VHA + K G+ +   +  +L+D+Y     +D A
Sbjct: 100 YEVNQFV-FTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAA 158

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  +  KD VS+  ++  +A+   +E+++ LF +M+ +G++P++FT +AAL +  GL
Sbjct: 159 RQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGL 218

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               +G+ VH   +K  +  +++V  ALL+LY+K   + EA++ F EMP+ D + +++MI
Sbjct: 219 EAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMI 278

Query: 248 TCYAWNEQYKESLKLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + YA +++ KE+L+LF R  Q +    + F F+++L   A+ + L +G QIH+  +    
Sbjct: 279 SRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGL 338

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S V V+N+L+D+YAKCG  E + ++F   +  + V W  +I  YVQ G+ E+ALNLF  
Sbjct: 339 DSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 398

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M   +I   + T++S+LRASA L +L  G+Q+HS  I++ +  +    ++L+DMYAK G 
Sbjct: 399 MLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGR 458

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + DA  TF +M +++ VSWNALI   + +G     L  F+ M QS  +P+ ++ + VLSA
Sbjct: 459 IDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSA 518

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS+ GL+++G  +F SM Q Y + P  EHY  MV +L RSG FDEA KL+ ++PF+P  +
Sbjct: 519 CSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVM 578

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +C IHKNL+  K  A ++ +ME  +D A +V +SN+YA A +W++V+ V+K M
Sbjct: 579 VWRALLGACVIHKNLDLGKVCAQRVLEMEP-QDDATHVLLSNMYATAKRWDNVAYVRKNM 637

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           +++ V+K    SWVE +  VH FT  D  HP    I   +E L ++ +  GY PD S  L
Sbjct: 638 KKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVL 697

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D +++ K   L  HSERLA+AF LI  P G  I ++KNLR C DCHA IKL+SKI  RE
Sbjct: 698 LDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQRE 757

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I +RD +RFHHF+ G CSC D+W
Sbjct: 758 IVIRDINRFHHFRQGVCSCGDYW 780



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 260/514 (50%), Gaps = 11/514 (2%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  ++A +L         N    +H  I+K G +  L   N L+++Y     L+ A ++F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS--AGVGLAD 189
            EMP  ++VSF  L  GF++    + A +L + +   G++ + F F   L     + LAD
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   VHA+V K     + FV  AL+D YS    V  AR++F  +   D VS+  M+ C
Sbjct: 122 TCL--SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA N  +++SL LF +++   +  + F  S  L         ++G+ +H   +      +
Sbjct: 180 YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRD 239

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V  +L+++Y K G   EA++ F  +     +PW+ MIS Y Q    +EAL LF  M +
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 370 ANISA-DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +++   +  TFAS+L+A A L  L+LG Q+HS V++ G  SNVF  +AL+D+YAK G ++
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           ++++ F    E+N V+WN +I    Q GD +  L  F +M+    QP  V+  SVL A +
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
               +E G Q  +S+T K           S++D+  + G  D+A     +M  + DE+ W
Sbjct: 420 SLVALEPGRQ-IHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSW 477

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +++I    IH         A  LF M +  ++ P
Sbjct: 478 NALICGYSIHG----LGMEALNLFDMMQQSNSKP 507



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 6/237 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +N L+  Y K G +  + +LF    ++  V+W  +I GY Q     +A  LF +
Sbjct: 339 DSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 398

Query: 63  MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           M    G D  P  VT++++L   +         Q+H+  IK  YN   ++ NSL+D Y K
Sbjct: 399 ML---GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAK 455

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D AR  F +M ++D VS+NALI G++  GL  EA+ LF  MQ    KP+  TF   
Sbjct: 456 CGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGV 515

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
           LSA      +  GR     +++   +E        ++ L  +     EA KL GE+P
Sbjct: 516 LSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP 572



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 79/199 (39%), Gaps = 44/199 (22%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+++V  N LI  Y K G +  AR  F+ M  +  VSW  LI GYS      EA  LF
Sbjct: 438 MYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLF 497

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DM     S P+ +TF  +LS CS                                    
Sbjct: 498 -DMMQQSNSKPNKLTFVGVLSACSNAGL-------------------------------- 524

Query: 121 IRCLDLARRVFKEMPQKDSVS-----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
              LD  R  FK M Q   +      +  ++    + G  +EA+KL  E+    F+PS  
Sbjct: 525 ---LDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP---FQPSVM 578

Query: 176 TFAAALSAGVGLADIALGR 194
            + A L A V   ++ LG+
Sbjct: 579 VWRALLGACVIHKNLDLGK 597


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/741 (37%), Positives = 438/741 (59%), Gaps = 29/741 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K      ++ LF+ + +R  VSW  L   Y Q +   EA  LF +M   G 
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSG- 253

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  + +++++ C+    ++    +H  +IK GY+      N+LVD Y K+  L  A 
Sbjct: 254 IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF+++ Q D VS+NA+I G      +E+A++L  +M+                      
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------------- 351

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                RQ+H+ ++K +   ++FV+  L+D+YSK D + +AR  F  +PE D +++N +I+
Sbjct: 352 -----RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 406

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y+   +  E+L LF E+       +Q   ST+L   A    + + RQ+H  ++ +   S
Sbjct: 407 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 466

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ V NSL+D Y KC   E+A+ IF   +    V +T+MI+AY Q G  EEAL LF+EM 
Sbjct: 467 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 526

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D+   +S+L A A L++   GKQLH  +++ GF+ ++F+G++L++MYAK GS+ 
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 586

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F E+ ER IVSW+A+I   AQ+G  +  L+ F  M++ G  P+ ++L+SVL AC+
Sbjct: 587 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN 646

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ E   YF SM + +  +P +EHYA M+D+L R+G  +EA +L+ +MPFE +  +W
Sbjct: 647 HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVW 706

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ + RIHK++E  ++AA+ LF +E    +  +V ++NIYA AG+WE+V++V++ MR+
Sbjct: 707 GALLGAARIHKDVELGRRAAEMLFILEP-EKSGTHVLLANIYASAGKWENVAEVRRLMRD 765

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
             V+K    SW+E+K KV+ F   D  H ++ EI  K++ L   M K GY P     LHD
Sbjct: 766 SKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHD 825

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            ++  K   L +HSE+LA+AF LI TP+G+PI V KNLR C DCH A K I KI  REI 
Sbjct: 826 VEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREII 885

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD +RFHHFKDG CSC D+W
Sbjct: 886 VRDINRFHHFKDGSCSCGDYW 906



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 295/564 (52%), Gaps = 30/564 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K      AR+L +   +   VSW+ LI GY+Q      A   F +M   G  
Sbjct: 95  NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ TF+++L  CS         QVH  ++  G+   + + N+LV  Y K      ++R
Sbjct: 155 CNEF-TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKR 213

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E+P+++ VS+NAL + + +     EA+ LF EM   G KP++F+ ++ ++A  GL D
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + G+ +H +++K  +  + F ANAL+D+Y+K   + +A  +F ++ + D VS+N +I  
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              +E ++++L+L  +++                           RQ+H+  +     S+
Sbjct: 334 CVLHEHHEQALELLGQMK---------------------------RQLHSSLMKMDMESD 366

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+  LVDMY+KC   E+A+  F  L     + W A+IS Y Q     EAL+LF+EM +
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 426

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  +Q T ++IL+++A L  + + +Q+H   ++SGF S+++  ++L+D Y K   ++D
Sbjct: 427 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 486

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+E    ++VS+ ++I+A AQ G  +  LK F +M     +PD     S+L+AC++
Sbjct: 487 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 546

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
               E+G Q  +    KY          S+V++  + G  D+A +  +++  E   + WS
Sbjct: 547 LSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWS 604

Query: 550 SVINSCRIHKNLEFAKKAADQLFK 573
           ++I     H +   A +  +Q+ K
Sbjct: 605 AMIGGLAQHGHGRQALQLFNQMLK 628



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 176/633 (27%), Positives = 293/633 (46%), Gaps = 86/633 (13%)

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   P  V+++ LLS C    +    +Q+HA I K G +    I N L++ Y K R    
Sbjct: 50  GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGY 109

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++  E  + D VS++ALI+G+A+ GL   A+  F EM  LG K ++FTF++ L A   
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           + D+ +G+QVH  VV + F  +VFVAN L+ +Y+K D  +++++LF E+PE + VS+N +
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +CY   +   E++ LF E+  +    ++F  S++++      D   G+ IH   I    
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +   AN+LVDMYAK G   +A  +F  +     V W A+I+  V   + E+AL L  +
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R                           QLHS +++    S++F    L+DMY+K   
Sbjct: 350 MKR---------------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDL 382

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM------------------ 468
           L+DA   F  +PE+++++WNA+IS  +Q  +    L  F +M                  
Sbjct: 383 LEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 442

Query: 469 -----------------VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
                            V+SG+  D   + S++ +   C  +E+  + F   T    +  
Sbjct: 443 TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS- 501

Query: 512 KKEHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
               + SM+    + G  +EA KL   M  M  +PD  + SS++N+C      E  K+  
Sbjct: 502 ----FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH 557

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
             + K   + D     ++ N+YA  G  +   +    + ERG+      SW  +   +  
Sbjct: 558 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI-----VSWSAMIGGL-- 610

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                    Q    R+ ++ L  +M KEG  P+
Sbjct: 611 --------AQHGHGRQALQ-LFNQMLKEGVSPN 634



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 226/464 (48%), Gaps = 30/464 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +  S N L+  Y K G+LA A  +F  +     VSW  +I G        +A +L   M+
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                                        Q+H+ ++K    S L +   LVD Y K   L
Sbjct: 352 R----------------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR  F  +P+KD +++NA+I+G+++   + EA+ LFVEM   G   +  T +  L + 
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GL  + + RQVH   VK+ F  +++V N+L+D Y K   V +A ++F E    D VS+ 
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT YA   Q +E+LKLF E+Q       +F  S+LL+  AN    + G+Q+H   +  
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 563

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + ++   NSLV+MYAKCG  ++A   F+ L+    V W+AMI    Q G+  +AL LF
Sbjct: 564 GFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLF 623

Query: 365 IEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAK 423
            +M +  +S +  T  S+L A      ++  K    S     GF       + ++D+  +
Sbjct: 624 NQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGR 683

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFE 466
           +G + +A++   +MP E N   W AL+ A   + D +   ++ E
Sbjct: 684 AGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 727



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
           F+ A ++   +   S  P T  I   + KGN                +    +++ +L  
Sbjct: 21  FKPAPKLIQTVPQFSEDPQTTAILNLIDKGNF---------------TPTSVSYSKLLSQ 65

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
                SL  G Q+H+ + +SG   +    + L+++Y+K      A +   E  E ++VSW
Sbjct: 66  CCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSW 125

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +ALIS  AQNG     L +F +M   G + +  +  SVL ACS
Sbjct: 126 SALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/749 (37%), Positives = 435/749 (58%), Gaps = 57/749 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  ++VS N +ISGY+++G    AR+LF+ M +R  VSW ++I GY +     +A +LF
Sbjct: 90  MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + D  ++ T+LSG                                   Y +
Sbjct: 150 EIM-----PERDVCSWNTMLSG-----------------------------------YAQ 169

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+D AR VF  MP+K+ VS+NAL++ + +    EEA  LF   ++        ++   
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCL 225

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   V    I   RQ   F    N V +V   N ++  Y++   + EAR+LF E P  D 
Sbjct: 226 LGGFVKKKKIVEARQ---FFDSMN-VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++  M++ Y  N   +E+ +LF ++     +R++  ++ +L+       +++ +++   
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFD- 336

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                    V   N+++  YA+CG+  EAK +F  +     V W AMI+ Y Q G+  EA
Sbjct: 337 ---VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF++M R     ++++F+S L   A++ +L LGKQLH  +++ G+ +  F G+ALL M
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K GS+++A   FKEM  ++IVSWN +I+  +++G  +  L+ FE M + G +PD  ++
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           ++VLSACSH GL+++G QYF +MTQ Y + P  +HYA MVD+L R+G  ++A  LM  MP
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPD  +W +++ + R+H N E A+ AAD++F ME   ++  YV +SN+YA +G+W  V 
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP-ENSGMYVLLSNLYASSGRWGDVG 632

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  MR++GV+KV  YSW+E+++K H F+  DE HP+ +EI   +E L   MKK GY  
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
            TS  LHD +EE K   ++YHSERLA+A+ ++    G PI V+KNLR C DCH AIK ++
Sbjct: 693 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 752

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +ITGR I +RD++RFHHFKDG CSC D+W
Sbjct: 753 RITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 68/306 (22%)

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR-ASAELA------------ 390
           W   IS+Y++ G   EAL +F  M R +  +     +  LR    ELA            
Sbjct: 67  WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126

Query: 391 ------------SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
                       + +LGK    F I      +V S + +L  YA++G + DA   F  MP
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184

Query: 439 ERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQ--------------------- 474
           E+N VSWNAL+SA  QN    +A    KS E+     +                      
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244

Query: 475 ---PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE--HYASMVDILCRSGCF 529
               D VS  ++++  +  G I+E  Q F+         P ++   + +MV    ++   
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMV 297

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           +EA +L  +MP E +E+ W++++      + +E AK    +LF +   R+ + +  M   
Sbjct: 298 EEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAK----ELFDVMPCRNVSTWNTMITG 352

Query: 590 YAVAGQ 595
           YA  G+
Sbjct: 353 YAQCGK 358



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 51/285 (17%)

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R N +   A F S+ RA+      S  K L    ++ G  S++   +  +  Y ++G   
Sbjct: 27  RCNNAHGAANFHSLKRATQTQIQKSQTKPL----LKCG-DSDIKEWNVAISSYMRTGRCN 81

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A++ FK MP  + VS+N +IS   +NG+ +   K F++M +     D VS   ++    
Sbjct: 82  EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIK--- 134

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
             G +    +      + +++ P+++   + +M+    ++GC D+A  +  +MP E +++
Sbjct: 135 --GYVRN--RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-EKNDV 189

Query: 547 MWSSVIN----------SCRIHKNLE-------------FAKKA----ADQLFKMEKLRD 579
            W+++++          +C + K+ E             F KK     A Q F    +RD
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
              +  +   YA +G+   + + ++   E  V+ V  ++W  + S
Sbjct: 250 VVSWNTIITGYAQSGK---IDEARQLFDESPVQDV--FTWTAMVS 289


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/753 (37%), Positives = 460/753 (61%), Gaps = 11/753 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++V  N LIS Y K G+  TAR +F  M + R  VSW+ ++  ++  +   +A   F+DM
Sbjct: 78  DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 137

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NSILIICNSLVDSYCKI 121
             + G  P+   FA ++  CS  + A     ++  ++K GY    + + C  L+D + K 
Sbjct: 138 -LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGC-ELIDMFVKG 195

Query: 122 RC-LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A +VF +MP+++ V++  +IT FA+ G   +AI LF++M+  G+ P  FT+++ 
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 255

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPE 237
           LSA   L  +ALG+Q+H+ V++     +V V  +L+D+Y+K      V ++RK+F +MPE
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315

Query: 238 VDGVSYNVMITCYAWN-EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
            + +S+  +IT Y  + E  KE+++LF ++       + F FS++L    N  D   G Q
Sbjct: 316 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 375

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +++  +     S   V NSL+ MYA+ GR E+A++ F  L   + V + A++  Y +   
Sbjct: 376 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 435

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEA  LF E+    I     TFAS+L  +A + ++  G+Q+H  +++ G+ SN    +A
Sbjct: 436 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 495

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY++ G+++ A Q F EM +RN++SW ++I+  A++G A   L+ F  M+++G +P+
Sbjct: 496 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 555

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ ++VLSACSH G+I EG ++FNSM +++ + P+ EHYA MVD+L RSG   EA + +
Sbjct: 556 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 615

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP   D ++W +++ +CR+H N E  + AA+ + + E   D A Y+ +SN++A AGQW
Sbjct: 616 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQW 674

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +++K+M+ER + K    SW+E++++VH F   +  HPQ  +I ++++ L  ++K+ 
Sbjct: 675 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 734

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT   LHD +EE K + L  HSE++A+AF LI+T +  PI + KNLR C DCH AI
Sbjct: 735 GYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAI 794

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K IS  TGREI VRDS+RFHH K+G CSC D+W
Sbjct: 795 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 284/521 (54%), Gaps = 12/521 (2%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+ T   + PD  T++ LL  C           VH  +++ G     ++ N+L+  Y K
Sbjct: 32  LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91

Query: 121 IRCLDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               + AR +F+ M  K D VS++A+++ FA   +  +AI  F++M  LGF P+++ FAA
Sbjct: 92  CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDC-VVEARKLFGEMPE 237
            + A        +G  ++ FVVKT ++E +V V   L+D++ K    +  A K+F +MPE
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + V++ +MIT +A     ++++ LF +++ + +   +F +S++LS       L +G+Q+
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           H++ I      +V V  SLVDMYAKC   G  ++++++F  +   + + WTA+I+AYVQ 
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 331

Query: 355 GNLE-EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
           G  + EA+ LF +M   +I  +  +F+S+L+A   L+    G+Q++S+ ++ G  S    
Sbjct: 332 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 391

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G++L+ MYA+SG ++DA + F  + E+N+VS+NA++   A+N  ++     F ++  +G 
Sbjct: 392 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 451

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
              + +  S+LS  +  G + +G Q    +  K   +  +    +++ +  R G  + A 
Sbjct: 452 GISAFTFASLLSGAASIGAMGKGEQIHGRLL-KGGYKSNQCICNALISMYSRCGNIEAAF 510

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           ++  +M  + + I W+S+I     H    FA +A +   KM
Sbjct: 511 QVFNEME-DRNVISWTSMITGFAKHG---FATRALEMFHKM 547



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 201/449 (44%), Gaps = 77/449 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  N +S   +I+ YV+SG                                 +EA +LF
Sbjct: 313 MPEHNVMSWTAIITAYVQSGECD------------------------------KEAIELF 342

Query: 61  VDMRTDGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M   G   P++ +F+++L  C   S+P T     QV++  +K G  S+  + NSL+  
Sbjct: 343 CKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGE---QVYSYAVKLGIASVNCVGNSLISM 398

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y +   ++ AR+ F  + +K+ VS+NA++ G+AK   +EEA  LF E+   G   S FTF
Sbjct: 399 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 458

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ LS    +  +  G Q+H  ++K  +  N  + NAL+ +YS+   +  A ++F EM +
Sbjct: 459 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED 518

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + +S+  MIT +A +     +L++F ++  T    ++  +  +LS  ++   +  G Q 
Sbjct: 519 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QK 577

Query: 298 HTQTIVT--TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQK 354
           H  ++      +  ++    +VD+  + G   EA E   ++  ++  + W  ++ A    
Sbjct: 578 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 637

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           GN E                       + R +AE+          ++++ S         
Sbjct: 638 GNTE-----------------------LGRHAAEMILEQEPDDPAAYILLS--------- 665

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIV 443
               +++A +G  KD ++  K M ERN++
Sbjct: 666 ----NLHASAGQWKDVVKIRKSMKERNLI 690



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 36/300 (12%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G L  A +    M + N   D  T++ +L++     +  LGK +H  +++SG   +    
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 415 SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           + L+ +Y+K G  + A   F+ M  +R++VSW+A++S  A N      + +F DM++ G+
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 474 QPDSVSLLSVLSACSH---------------------------CGLIEEGLQYFNSMTQK 506
            P+     +V+ ACS+                           C LI+  ++    +   
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 507 YKLRPKKEH-----YASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIH 558
           YK+  K        +  M+    + GC  +A  L   M    + PD   +SSV+++C   
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
             L   K+   ++ ++    D     ++ ++YA      SV   +K   +     V +++
Sbjct: 263 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 322


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/753 (37%), Positives = 460/753 (61%), Gaps = 11/753 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++V  N LIS Y K G+  TAR +F  M + R  VSW+ ++  ++  +   +A   F+DM
Sbjct: 60  DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 119

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NSILIICNSLVDSYCKI 121
             + G  P+   FA ++  CS  + A     ++  ++K GY    + + C  L+D + K 
Sbjct: 120 -LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCE-LIDMFVKG 177

Query: 122 RC-LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A +VF +MP+++ V++  +IT FA+ G   +AI LF++M+  G+ P  FT+++ 
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 237

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPE 237
           LSA   L  +ALG+Q+H+ V++     +V V  +L+D+Y+K      V ++RK+F +MPE
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297

Query: 238 VDGVSYNVMITCYAWN-EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
            + +S+  +IT Y  + E  KE+++LF ++       + F FS++L    N  D   G Q
Sbjct: 298 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 357

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +++  +     S   V NSL+ MYA+ GR E+A++ F  L   + V + A++  Y +   
Sbjct: 358 VYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK 417

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEA  LF E+    I     TFAS+L  +A + ++  G+Q+H  +++ G+ SN    +A
Sbjct: 418 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 477

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY++ G+++ A Q F EM +RN++SW ++I+  A++G A   L+ F  M+++G +P+
Sbjct: 478 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 537

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ ++VLSACSH G+I EG ++FNSM +++ + P+ EHYA MVD+L RSG   EA + +
Sbjct: 538 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 597

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP   D ++W +++ +CR+H N E  + AA+ + + E   D A Y+ +SN++A AGQW
Sbjct: 598 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQW 656

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +++K+M+ER + K    SW+E++++VH F   +  HPQ  +I ++++ L  ++K+ 
Sbjct: 657 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEM 716

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT   LHD +EE K + L  HSE++A+AF LI+T +  PI + KNLR C DCH AI
Sbjct: 717 GYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAI 776

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K IS  TGREI VRDS+RFHH K+G CSC D+W
Sbjct: 777 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 284/521 (54%), Gaps = 12/521 (2%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+ T   + PD  T++ LL  C           VH  +++ G     ++ N+L+  Y K
Sbjct: 14  LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73

Query: 121 IRCLDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               + AR +F+ M  K D VS++A+++ FA   +  +AI  F++M  LGF P+++ FAA
Sbjct: 74  CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 133

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDC-VVEARKLFGEMPE 237
            + A        +G  ++ FVVKT ++E +V V   L+D++ K    +  A K+F +MPE
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 193

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + V++ +MIT +A     ++++ LF +++ + +   +F +S++LS       L +G+Q+
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           H++ I      +V V  SLVDMYAKC   G  ++++++F  +   + + WTA+I+AYVQ 
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 313

Query: 355 GNLE-EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
           G  + EA+ LF +M   +I  +  +F+S+L+A   L+    G+Q++S+ ++ G  S    
Sbjct: 314 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 373

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G++L+ MYA+SG ++DA + F  + E+N+VS+NA++   A+N  ++     F ++  +G 
Sbjct: 374 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 433

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
              + +  S+LS  +  G + +G Q    +  K   +  +    +++ +  R G  + A 
Sbjct: 434 GISAFTFASLLSGAASIGAMGKGEQIHGRLL-KGGYKSNQCICNALISMYSRCGNIEAAF 492

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           ++  +M  + + I W+S+I     H    FA +A +   KM
Sbjct: 493 QVFNEME-DRNVISWTSMITGFAKHG---FATRALEMFHKM 529



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 201/449 (44%), Gaps = 77/449 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  N +S   +I+ YV+SG                                 +EA +LF
Sbjct: 295 MPEHNVMSWTAIITAYVQSGECD------------------------------KEAIELF 324

Query: 61  VDMRTDGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M   G   P++ +F+++L  C   S+P T     QV++  +K G  S+  + NSL+  
Sbjct: 325 CKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGE---QVYSYAVKLGIASVNCVGNSLISM 380

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y +   ++ AR+ F  + +K+ VS+NA++ G+AK   +EEA  LF E+   G   S FTF
Sbjct: 381 YARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTF 440

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ LS    +  +  G Q+H  ++K  +  N  + NAL+ +YS+   +  A ++F EM +
Sbjct: 441 ASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED 500

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + +S+  MIT +A +     +L++F ++  T    ++  +  +LS  ++   +  G Q 
Sbjct: 501 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QK 559

Query: 298 HTQTIVT--TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQK 354
           H  ++      +  ++    +VD+  + G   EA E   ++  ++  + W  ++ A    
Sbjct: 560 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 619

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           GN E                       + R +AE+          ++++ S         
Sbjct: 620 GNTE-----------------------LGRHAAEMILEQEPDDPAAYILLS--------- 647

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIV 443
               +++A +G  KD ++  K M ERN++
Sbjct: 648 ----NLHASAGQWKDVVKIRKSMKERNLI 672



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 36/300 (12%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G L  A +    M + N   D  T++ +L++     +  LGK +H  +++SG   +    
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 415 SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           + L+ +Y+K G  + A   F+ M  +R++VSW+A++S  A N      + +F DM++ G+
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 474 QPDSVSLLSVLSACSH---------------------------CGLIEEGLQYFNSMTQK 506
            P+     +V+ ACS+                           C LI+  ++    +   
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 507 YKLRPKKEH-----YASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIH 558
           YK+  K        +  M+    + GC  +A  L   M    + PD   +SSV+++C   
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
             L   K+   ++ ++    D     ++ ++YA      SV   +K   +     V +++
Sbjct: 245 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 304


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 292/785 (37%), Positives = 443/785 (56%), Gaps = 45/785 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           ++T+  N LIS Y K  +L  AR +F SM    R  VSW  +I  Y+Q     EA  L+ 
Sbjct: 40  RDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYW 99

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M   G    D+VTF ++L  CS      E   +H  +   G +S   + N+LV  Y + 
Sbjct: 100 RMNLQG-LGTDHVTFVSVLGACSSLAQGRE---IHNRVFYSGLDSFQSLANALVTMYARF 155

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  A+R+F+ +  +D  S+NA+I   ++ G    A+++F EM+    KP+  T+   +
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVI 214

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S       +  GR++HA +V   F  ++ VA AL+++Y K     EAR++F +M + D V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+NVMI CY  N  + E+L+L+++L    F R++  F ++L   ++   L  GR +H+  
Sbjct: 275 SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA--------------------------- 334
           +     SEV VA +LV+MYAKCG  EEA+++F                            
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394

Query: 335 -------NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANISADQATFASILRAS 386
                   L    T+ W AMI+ YVQ G    A+ +F EM   A +  D  TF ++L A 
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A L  LS  K LH+ +  S   SNV   + L++MYA+ GSL++A + F    E+ +VSW 
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           A+++A +Q G     L  F++M   G +PD V+  S+L  C+H G +E+G +YF  M + 
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           + L P  +H+A+MVD+L RSG   +A++L+  MPFEPD + W + + +CRIH  LE  + 
Sbjct: 575 HALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEA 634

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           AA+++++++     APY+AMSNIYA  G WE V+ V+K M ERG++K+   S++E+  K+
Sbjct: 635 AAERVYELDP-SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F++  + HP+T+EI  ++  L   M+  GY PDT   LHD  E  K   L YHSE++A
Sbjct: 694 HEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMA 753

Query: 687 IAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF-KDGFCS 744
           IAF L+++   G PI V+KNLR C+DCH A K I++I GR+I VRD +RFH F  DG CS
Sbjct: 754 IAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCS 813

Query: 745 CRDFW 749
           C D+W
Sbjct: 814 CGDYW 818



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 261/519 (50%), Gaps = 43/519 (8%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD VTF T+L  CS      E   +H  I    +    ++ N+L+  Y K   L  AR V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 131 FKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F+ M   Q++ VS+NA+I  +A+ G + EA+ L+  M   G      TF + L A    +
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA---CS 121

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +A GR++H  V  +       +ANAL+ +Y++   V +A+++F  +   D  S+N +I 
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            ++ +  +  +L++F+E++      S   +  ++S  +    L  GR+IH + +     +
Sbjct: 182 AHSQSGDWSGALRIFKEMKCDVKPNST-TYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ VA +L++MY KCG   EA+E+F  +     V W  MI  YV  G+  EAL L+ ++ 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                  +ATF SIL A + + +L+ G+ +HS ++  G  S V   +AL++MYAK GSL+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 429 DAIQTFKEMPERNIV----------------------------------SWNALISACAQ 454
           +A + F  M  R+ V                                  SWNA+I+   Q
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQ 420

Query: 455 NGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           NG A A +K F +M   +G +PD+V+ ++VL AC+  G + E ++  ++   + +L    
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELESNV 479

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               +++++  R G  +EAE+L A    E   + W++++
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMV 517



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 215/426 (50%), Gaps = 9/426 (2%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P + TF   L +     D+  GR +H  +  + F  +  V NAL+ +Y K D +V+AR 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 231 LFGEMP--EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           +F  M   + + VS+N MI  YA N    E+L L+  +           F ++L   ++ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L  GR+IH +   +   S   +AN+LV MYA+ G   +AK +F +L       W A+I
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
            A+ Q G+   AL +F EM + ++  +  T+ +++   +    L  G+++H+ ++ +GF 
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
           +++   +AL++MY K GS  +A + F +M +R++VSWN +I     NGD    L+ ++ +
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
              G++    + +S+L ACS    + +G +  +S   +  L  +     ++V++  + G 
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            +EA K+   M    D + WS++I +   +   + A+K A ++F     RD   + AM  
Sbjct: 359 LEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARK-ARKVFDRLGSRDTISWNAMIT 416

Query: 589 IYAVAG 594
            Y   G
Sbjct: 417 TYVQNG 422


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/697 (39%), Positives = 424/697 (60%), Gaps = 7/697 (1%)

Query: 56   AFKLFVDMRTDGGSDPDY--VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNS 113
            A + FV+M    G + DY  VT   +L+  +  D      QVH   +K G +S + + NS
Sbjct: 888  AIECFVNMN---GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANS 944

Query: 114  LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
            LV+ Y K+ C   AR VF +M   D +S+N++I+  A+  L EE++ LF+++ H G KP 
Sbjct: 945  LVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPD 1004

Query: 174  DFTFAAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
             FT A+ L A   L D + + RQ+H   +KT  + + FVA  L+D+YSK   + EA  LF
Sbjct: 1005 HFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLF 1064

Query: 233  GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
                ++D   +N M+  Y      K++L+LF  +  +     Q   +T        + L 
Sbjct: 1065 QNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLD 1124

Query: 293  IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
             G+QIH   I     S++ V + ++DMY KCG    A  +F  +S    V WT+MIS  V
Sbjct: 1125 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 1184

Query: 353  QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
              GN ++AL ++  M ++ +  D+ TFA++++AS+ + +L  G+QLH+ VI+   +S+ F
Sbjct: 1185 DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 1244

Query: 413  SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             G++L+DMYAK G+++DA + FK+M  RNI  WNA++   AQ+G+A+  +  F+ M   G
Sbjct: 1245 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304

Query: 473  YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
             +PD VS + +LSACSH GL  E  +Y +SM   Y + P+ EHY+ +VD L R+G   EA
Sbjct: 1305 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 1364

Query: 533  EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            +K++  MPF+    +  +++ +CRI  ++E  K+ A +LF +E   D+A YV +SNIYA 
Sbjct: 1365 DKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF-DSAAYVLLSNIYAA 1423

Query: 593  AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
            A +W+ V+  +K M+ + V+K   +SW+++K+ +H+F  +D  HPQ + I  K+E +M+ 
Sbjct: 1424 ANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKT 1483

Query: 653  MKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
            ++++GY PDT   L D ++E K  SL YHSE+LAIA+ LI+TP  + I V+KNLR C DC
Sbjct: 1484 IREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDC 1543

Query: 713  HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            H AIK ISK+  REI +RD++RFHHF+DG CSC D+W
Sbjct: 1544 HNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 176/694 (25%), Positives = 321/694 (46%), Gaps = 85/694 (12%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-----SQKNQFREAFKLFVDM 63
            +N L++ Y K G+L++AR++F++  +R  V+W  ++G Y     S     +E   LF  +
Sbjct: 659  SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 718

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            R   GS    +T A +L  C           VH   IK G    + +  +LV+ Y K   
Sbjct: 719  RASLGSTT-RMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGR 777

Query: 124  LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            +  AR +F  M ++D V +N ++ G+ + GL +EA +LF E    G +P +F+    L+ 
Sbjct: 778  MRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 837

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                            V + N+ E  ++A+ +    +K         L  + P+V    +
Sbjct: 838  ----------------VSEVNWDEGKWLADQVQAYAAK-------LSLSDDNPDV--FCW 872

Query: 244  NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            N  ++   W      +++ F  +     D        +L+ VA   DL++G+Q+H   + 
Sbjct: 873  NKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVK 932

Query: 304  TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            +   S+V VANSLV+MY+K G    A+E+F ++ H+  + W +MIS+  Q    EE++NL
Sbjct: 933  SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNL 992

Query: 364  FIEMCRANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            FI++    +  D  T AS+LRA + L   L++ +Q+H   +++G +++ F  + L+D+Y+
Sbjct: 993  FIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYS 1052

Query: 423  KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
            KSG +++A   F+   + ++  WNA++       D +  L+ F  + +SG + D ++L +
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLAT 1112

Query: 483  VLSACSHCGLIEEGLQ--------------YFNS----------------MTQKYKLRPK 512
               AC    L+++G Q              + NS                +   Y   P 
Sbjct: 1113 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPD 1172

Query: 513  KEHYASMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
               + SM+     +G  D+A ++   M Q    PDE  ++++I +      LE  ++   
Sbjct: 1173 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHA 1232

Query: 570  QLFKMEKLRDAAPYVAMS--NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
             + K++ + D  P+V  S  ++YA  G  E   ++ K M    VR +  ++ + +    H
Sbjct: 1233 NVIKLDCVSD--PFVGTSLVDMYAKCGNIEDAYRLFKKMN---VRNIALWNAMLVGLAQH 1287

Query: 628  VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                N E          +  NL + MK  G +PD
Sbjct: 1288 ---GNAE----------EAVNLFKSMKSHGIEPD 1308



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 225/453 (49%), Gaps = 4/453 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N L++ Y K G    ARE+FN M     +SW  +I   +Q +   E+  LF+D+  +G  
Sbjct: 943  NSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG-L 1001

Query: 70   DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD+ T A++L  CS   D  N   Q+H   +K G  +   +  +L+D Y K   ++ A 
Sbjct: 1002 KPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAE 1061

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             +F+     D   +NA++ G+      ++A++LF  +   G K    T A A  A   L 
Sbjct: 1062 FLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLV 1121

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             +  G+Q+HA  +K  F  ++ V + +LD+Y K   +V A  +F  +   D V++  MI+
Sbjct: 1122 LLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMIS 1181

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                N    ++L+++  ++ +R    ++ F+TL+   +    L+ GRQ+H   I    +S
Sbjct: 1182 GCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS 1241

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +  V  SLVDMYAKCG  E+A  +F  ++  +   W AM+    Q GN EEA+NLF  M 
Sbjct: 1242 DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMK 1301

Query: 369  RANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  D+ +F  IL A +     S   + LHS     G    +   S L+D   ++G +
Sbjct: 1302 SHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLV 1361

Query: 428  KDAIQTFKEMPERNIVSWN-ALISACAQNGDAQ 459
            ++A +  + MP +   S N AL+ AC   GD +
Sbjct: 1362 QEADKVIETMPFKASASINRALLGACRIQGDVE 1394



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 225/470 (47%), Gaps = 45/470 (9%)

Query: 95   VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA---- 150
             HA I+  G      + N+L+  Y K   L  AR+VF   P++D V++NA++  +A    
Sbjct: 643  THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 702

Query: 151  -KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
              +G  +E + LF  ++      +  T A  L   +    +     VH + +K     +V
Sbjct: 703  SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762

Query: 210  FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            FV+ AL+++YSK   + +AR LF  M E D V +N+M+  Y      KE+ +LF E   +
Sbjct: 763  FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 822

Query: 270  RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA-KCGRFEE 328
                 +F    +L+ V+ +++   G+ +  Q                V  YA K    ++
Sbjct: 823  GLRPDEFSVQLILNGVS-EVNWDEGKWLADQ----------------VQAYAAKLSLSDD 865

Query: 329  AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
              ++F          W   +S  +  G+   A+  F+ M   NI  D  T   +L A A 
Sbjct: 866  NPDVFC---------WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAG 916

Query: 389  LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
               L LGKQ+H   ++SG  S+V   ++L++MY+K G    A + F +M   +++SWN++
Sbjct: 917  TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 976

Query: 449  ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
            IS+CAQ+   + ++  F D++  G +PD  +L SVL ACS   LI +GL   N   Q + 
Sbjct: 977  ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLI-DGL---NISRQIHV 1030

Query: 509  LRPKKEHYA------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               K  + A      +++D+  +SG  +EAE L  Q   + D   W++++
Sbjct: 1031 HALKTGNIADSFVATTLIDVYSKSGKMEEAEFLF-QNKDDLDLACWNAMM 1079



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 174/380 (45%), Gaps = 32/380 (8%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   +   ++ LG+  HA +V +    + F++N LL +YSK   +  AR++F   PE D 
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687

Query: 241 VSYNVMITCYAW-----NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           V++N ++  YA      +   +E L LFR L+ +    ++   + +L +  N   L    
Sbjct: 688 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
            +H   I      +V V+ +LV++Y+KCGR  +A+ +F  +     V W  M+  YVQ G
Sbjct: 748 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 807

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             +EA  LF E  R+ +  D+ +   IL   +E+ +   GK L   V             
Sbjct: 808 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQV------------- 853

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
                YA   SL D      + P+  +  WN  +S C   GD    ++ F +M       
Sbjct: 854 ---QAYAAKLSLSD------DNPD--VFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDY 902

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D+V+LL VL+A +    +E G Q  + +  K  L        S+V++  + GC   A ++
Sbjct: 903 DAVTLLVVLAAVAGTDDLELGKQ-VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961

Query: 536 MAQMPFEPDEIMWSSVINSC 555
              M    D I W+S+I+SC
Sbjct: 962 FNDMK-HLDLISWNSMISSC 980



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 7/214 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL    +  +L +G+  H + +V+ +  +  ++N+L+ MY+KCG    A+++F       
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 341 TVPWTAMISAYV-----QKGNLEEALNLFIEMCRANI-SADQATFASILRASAELASLSL 394
            V W A++ AY        GN +E L+LF  + RA++ S  + T A +L+       L  
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            + +H + I+ G   +VF   AL+++Y+K G ++DA   F  M ER++V WN ++    Q
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            G  +   + F +  +SG +PD  S+  +L+  S
Sbjct: 806 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 15/198 (7%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +LR +    +L LGK  H+ ++ SG   + F  + LL MY+K GSL  A Q F   PER+
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 442 IVSWNALISACA-----QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC--SHCGLIE 494
           +V+WNA++ A A      +G+AQ  L  F  +  S      ++L  VL  C  S C    
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG+  +     K  L        ++V+I  + G   +A  L   M  E D ++W+ ++  
Sbjct: 747 EGVHGY---AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLKG 802

Query: 555 CRIHKNLEFAKKAADQLF 572
             +   LE   K A QLF
Sbjct: 803 -YVQLGLE---KEAFQLF 816


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 291/785 (37%), Positives = 443/785 (56%), Gaps = 45/785 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           ++T+  N LIS Y K  +L  AR +F SM    R  VSW  +I  Y+Q     EA  L+ 
Sbjct: 40  RDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYW 99

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M   G    D+VTF ++L  CS      E   +H  +   G +S   + N+LV  Y + 
Sbjct: 100 RMNLQG-LGTDHVTFVSVLGACSSLAQGRE---IHNRVFYSGLDSFQSLANALVTMYARF 155

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  A+R+F+ +  +D  S+NA+I   ++ G    A+++F EM+    KP+  T+   +
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVI 214

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S       +  GR++HA +V   F  ++ VA AL+++Y K     EAR++F +M + D V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+NVMI CY  N  + E+L+L+++L    F R++  F ++L   ++   L  GR +H+  
Sbjct: 275 SWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI 334

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA--------------------------- 334
           +     SEV VA +LV+MYAKCG  EEA+++F                            
Sbjct: 335 LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394

Query: 335 -------NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANISADQATFASILRAS 386
                   L    T+ W AMI+ YVQ G    A+ +F EM   A +  D  TF ++L A 
Sbjct: 395 KARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A L  LS  K LH+ +  S   SNV   + L++MYA+ GSL++A + F    E+ +VSW 
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           A+++A +Q G     L  F++M   G +PD V+  S+L  C+H G +E+G +YF  M + 
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           + L P  +H+A+MVD+L RSG   +A++L+  MPFEPD + W + + +CRIH  LE  + 
Sbjct: 575 HGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEA 634

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           AA+++++++     APY+AMSNIYA  G WE V+ V+K M ERG++K+   S++E+  K+
Sbjct: 635 AAERVYELDP-SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F++  + HP+T+EI  ++  L   M+  GY PDT   LHD  E  K   L YHSE++A
Sbjct: 694 HEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMA 753

Query: 687 IAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF-KDGFCS 744
           IAF L+++   G PI V+KNLR C+DCH A K I++I GR+I +RD +RFH F  DG CS
Sbjct: 754 IAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCS 813

Query: 745 CRDFW 749
           C D+W
Sbjct: 814 CGDYW 818



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 262/519 (50%), Gaps = 43/519 (8%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD VTF T+L  CS      E   +H  I    +    ++ N+L+  Y K   L  AR V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 131 FKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F+ M   Q++ VS+NA+I  +A+ G + EA+ L+  M   G      TF + L A    +
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA---CS 121

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +A GR++H  V  +       +ANAL+ +Y++   V +A+++F  +   D  S+N +I 
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            ++ +  +  +L++F+E++      S   +  ++S  +    L  GR+IH + +     S
Sbjct: 182 AHSQSGDWSGALRIFKEMKCDMKPNST-TYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ VA +L++MY KCG   EA+E+F  +     V W  MI  YVQ G+  EAL L+ ++ 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                  +ATF SIL A + + +L+ G+ +HS ++  G  S V   +AL++MYAK GSL+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 429 DAIQTFKEMPERNIVS----------------------------------WNALISACAQ 454
           +A + F  M  R+ V+                                  WNA+I+   Q
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420

Query: 455 NGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           NG A A +K F +M   +G +PD+V+ ++VL AC+  G + E ++  ++   + +L    
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELESNV 479

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               +++++  R G  +EAE+L A    E   + W++++
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMV 517



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 217/426 (50%), Gaps = 9/426 (2%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P + TF   L +     D+A GR +H  +  + F  +  V NAL+ +Y K D +V+AR 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 231 LFGEMP--EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           +F  M   + + VS+N MI  YA N    E+L L+  +           F ++L   ++ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L  GR+IH +   +   S   +AN+LV MYA+ G   +AK +F +L       W A+I
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
            A+ Q G+   AL +F EM + ++  +  T+ +++   +    L  G+++H+ ++ +GF 
Sbjct: 181 LAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
           S++   +AL++MY K GS  +A + F +M +R++VSWN +I    QNGD    L+ ++ +
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
              G++    + +S+L ACS    + +G +  +S   +  L  +     ++V++  + G 
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            +EA K+   M    D + WS++I +   +   + A+K A ++F     RD   + AM  
Sbjct: 359 LEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARK-ARKVFDRLGSRDTICWNAMIT 416

Query: 589 IYAVAG 594
            Y   G
Sbjct: 417 TYVQNG 422



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 38/393 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V    LI+ Y K G+   ARE+F+ M  R  VSW ++IG Y Q   F EA +L+  
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +G       TF ++L  CS      +   VH+ I++ G +S + +  +LV+ Y K  
Sbjct: 299 LDMEGFKRTK-ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 123 CLDLARRVFKEMPQKDSVS----------------------------------FNALITG 148
            L+ AR+VF  M  +D+V+                                  +NA+IT 
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITT 417

Query: 149 FAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           + + G    A+K+F EM    G KP   TF A L A   L  ++  + +HA + ++    
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NV V N L+++Y++   + EA +LF    E   VS+  M+  ++   +Y E+L LF+E+ 
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA-NSLVDMYAKCGRF 326
                     ++++L V  +   L+ G +  T       ++       ++VD+  + GR 
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRL 597

Query: 327 EEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            +AKE+  ++      V W   ++A    G LE
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/745 (37%), Positives = 442/745 (59%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N+L++ Y K G LATAR LF+ M +R  VS+  L+ GY+ + +F EA +LF  ++
Sbjct: 81  DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G  + ++    T+L      D       +HA   K G++    +  +L+D+Y     +
Sbjct: 141 REG-HEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAV 199

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR VF  +  KD+V++ A+++ +++  + E A+  F +M+  GFKP+ F   +AL A 
Sbjct: 200 CHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           V L+   LG+ +H   VKT +     V  ALLD+Y+K   + +A  +F  +P  D + ++
Sbjct: 260 VCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWS 319

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ YA + Q +++ ++F  +  +    ++F  S +L   AN   L++G QIH   I  
Sbjct: 320 FLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKL 379

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              SE+ V N+L+DMYAKC   E + EIF++L   + V W  +I  Y Q G  E+AL++F
Sbjct: 380 GYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVF 439

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM  A++ + Q TF+S+LRA A  +S+    Q+HS + +S F ++    ++L+D YAK 
Sbjct: 440 HEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKC 499

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++DA++ F+ + E ++VSWN++ISA A +G A   L+ F+ M +S  + + V+ +S+L
Sbjct: 500 GFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLL 559

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           S C   GL+ +GL  FNSM   ++++P  EHY  +V +L R+G   +A K +  +P  P 
Sbjct: 560 SVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPS 619

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W ++++SC +HKN+   + AA+++  +E   D   YV +SN+YA AG  + V+  +K
Sbjct: 620 PMVWRALLSSCVVHKNVALGRYAAEKVLDIEP-HDETTYVLLSNMYAAAGILDEVALWRK 678

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
           +MR  GV+K    SWVE+K +VH F+     HP    I   +E L  +  +EGY PD + 
Sbjct: 679 SMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINV 738

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD DEE K   L  HSERLA+A+ L  TP G PI +MKNLR+C DCH   K+ISKI  
Sbjct: 739 VLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQ 798

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI VRD +RFHHF++G CSC D+W
Sbjct: 799 REIIVRDINRFHHFEEGICSCGDYW 823



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 233/453 (51%), Gaps = 5/453 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N      LI  Y   G +  AR +F+ +V + AV+WT ++  YS+ +    A   F  
Sbjct: 180 DRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSK 239

Query: 63  MRTDG-GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           MR  G   +P  +T A   + C       +   +H   +K  Y++   +  +L+D Y K 
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSALLGK--GIHGCSVKTLYDTEPHVGGALLDMYAKC 297

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++ A  +F+ +P  D + ++ LI+ +A+   NE+A ++F+ M      P++F+ +  L
Sbjct: 298 GDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVL 357

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +A + LG Q+H   +K  +   +FV NAL+D+Y+K   +  + ++F  + + + V
Sbjct: 358 QACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEV 417

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +I  Y  +   +++L +F E++      +Q  FS++L   AN   ++   QIH+  
Sbjct: 418 SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLI 477

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
             +T  ++  V NSL+D YAKCG   +A ++F ++     V W ++ISAY   G    AL
Sbjct: 478 EKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDM 420
            LF  M +++I A+  TF S+L        ++ G  L +S ++      ++   + ++ +
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597

Query: 421 YAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
             ++G L DA++   ++P   + + W AL+S+C
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSC 630



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 42/223 (18%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +T+  N LI  Y K G +  A ++F S+V+   VSW  +I  Y+   +   A +LF  
Sbjct: 483 NNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDR 542

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M        D VTF +LLS C      N+ + +        +NS++              
Sbjct: 543 MNKSDIKAND-VTFVSLLSVCGSTGLVNQGLWL--------FNSMM-------------- 579

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
              +  R+   M       +  ++    + G   +A+K   ++      PS   + A LS
Sbjct: 580 ---MDHRIKPSMEH-----YTCIVRLLGRAGRLTDALKFIGDIPS---TPSPMVWRALLS 628

Query: 183 AGVGLADIALGRQVHAFVV------KTNFV--ENVFVANALLD 217
           + V   ++ALGR     V+      +T +V   N++ A  +LD
Sbjct: 629 SCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILD 671


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/745 (37%), Positives = 441/745 (59%), Gaps = 2/745 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N+L++ Y K G LA AR LF+ M +R  VS+  L+ GY+ +  F EA  LF  ++
Sbjct: 83  DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G  + ++    T+L      D       +HA   K G++    + +SL+D+Y     +
Sbjct: 143 REG-HEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAV 201

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR VF  +  KD+V++ A+++ +++  + E+A+  F +M+  G KP+ F   + L A 
Sbjct: 202 SHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAA 261

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           V L+   LG+ +H   VKT       V  ALLD+Y+K   + +AR +F  +P  D + ++
Sbjct: 262 VCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWS 321

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ YA + Q +++ ++F  +  +    ++F  S +L   AN   L +G+QIH   I  
Sbjct: 322 FLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKL 381

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              SE+ V N+L+D+YAKC   E + EIF +L   + V W  +I  Y Q G  E+AL++F
Sbjct: 382 GYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVF 441

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM  A++ + Q TF+S+LRA A  AS+    Q+HS + +S F ++    ++L+D YAK 
Sbjct: 442 QEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKC 501

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++DA++ F+ + + ++VSWNA+IS  A +G A   L+ F  M +S  +P+ V+ +++L
Sbjct: 502 GCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALL 561

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           S C   GL+ +GL  FNSMT  ++++P  +HY  +V +L R+G  ++A K +  +P  P 
Sbjct: 562 SVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPS 621

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W ++++SC +HKN+   K +A+++ ++E  +D   YV +SN+YA AG  + V+ ++K
Sbjct: 622 PMVWRALLSSCVVHKNVALGKFSAEKVLEIEP-QDETTYVLLSNMYAAAGILDQVALLRK 680

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
           +MR  GV+K    SWVE+K +VH F+     HP    I   +E L  +  +EGY PD + 
Sbjct: 681 SMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINV 740

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD DEE K   L  HSERLA+A+ L  TP G PI +MKNLR+C DCH   K+ISKI  
Sbjct: 741 VLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQ 800

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI VRD +RFHHF +G CSC D+W
Sbjct: 801 REIVVRDINRFHHFDEGICSCGDYW 825



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 236/452 (52%), Gaps = 3/452 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    + LI  Y   G ++ AR +F+ ++ + AV+WT ++  YS+ +   +A   F  
Sbjct: 182 DRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSK 241

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR   G+ P+     ++L       +A     +H   +K   ++   +  +L+D Y K  
Sbjct: 242 MRM-AGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCG 300

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ AR VF+ +P  D + ++ LI+ +A+   NE+A ++F+ M      P++F+ +  L 
Sbjct: 301 YIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQ 360

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +A + LG+Q+H  V+K  +   +FV NAL+D+Y+K   +  + ++F  + + + VS
Sbjct: 361 ACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVS 420

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  Y  +   +++L +F+E++      +Q  FS++L   AN   ++   QIH+   
Sbjct: 421 WNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +T  ++  V NSL+D YAKCG   +A ++F ++     V W A+IS Y   G   +AL 
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMY 421
           LF  M +++   +  TF ++L        ++ G  L +S  +      ++   + ++ + 
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLL 600

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
            ++G L DA++   ++P   + + W AL+S+C
Sbjct: 601 GRAGRLNDALKFIGDIPSTPSPMVWRALLSSC 632


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/744 (36%), Positives = 435/744 (58%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LIS Y++  +   A  +F  M+   +V++  LI G++Q      A  +F +M+ 
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G S PD VT A+LL+ CS      +  Q+H+ ++K G +   I+  SL+D Y K   ++
Sbjct: 238 SGLS-PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIE 296

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A ++F    + + V +N ++  + +     ++  +F  M   G +P+ FT+   L    
Sbjct: 297 EALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCT 356

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              +I LG Q+H+  +K  F  +++V+  L+D+YSK+  + +A+++   + E D VS+  
Sbjct: 357 HTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTS 416

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  +E  KE+L+ F+E+Q           ++ +S  A    +  G QIH +  V+ 
Sbjct: 417 MIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSG 476

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             ++V + N LV +YA+CG  +EA   F  + H   + W  +IS + Q G  EEAL +F+
Sbjct: 477 YSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFM 536

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A    +  TF S + ASA LA +  GKQ+H+ VI++G+ S     +AL+ +Y K G
Sbjct: 537 KMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCG 596

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA   F EM +RN VSWN +I+ C+Q+G     L  F+ M Q G +P  V+ + VL+
Sbjct: 597 SIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLT 656

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+EEGL YF SM+ ++ + P+ +HYA +VDIL R+G  D A++ + +MP   D 
Sbjct: 657 ACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADS 716

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C++HKNLE  + AA  L ++E   D+A YV +SN YAV G+W S  Q++K 
Sbjct: 717 MVWRTLLSACKVHKNLEIGEFAAKHLLELEP-HDSASYVLLSNAYAVTGKWASRDQIRKI 775

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RGVRK    SW+E+K+ VH F   D LHP  ++I   + +L   + K GYK +    
Sbjct: 776 MKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHL 835

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            H++++E K  +   HSE+LA+AF L++ P   P+ V+KNLR C DCH  +K  S + GR
Sbjct: 836 FHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGR 895

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD  RFHHF +G CSC D+W
Sbjct: 896 EIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 292/558 (52%), Gaps = 12/558 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI  Y K G +  AR +F  +  R  VSW  ++ GY+Q     EA +L+ +M   G  
Sbjct: 81  NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 70  DPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
              YV  +++LS C    T  EL Q    +H  + K G+ S   + N+L+  Y + R   
Sbjct: 141 PTPYV-LSSILSAC----TKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFR 195

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           LA RVF +M   DSV+FN LI+G A+ G  + A+ +F EMQ  G  P   T A+ L+A  
Sbjct: 196 LADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACS 255

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            + D+  G+Q+H++++K     +  +  +LLDLY K   + EA ++F      + V +N+
Sbjct: 256 AVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNL 315

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  Y   +   +S  +F  +       ++F +  +L    +  ++ +G QIH+ TI   
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG 375

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S++ V+  L+DMY+K G  ++A+ I   +     V WT+MI+ YVQ    +EAL  F 
Sbjct: 376 FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFK 435

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM    I  D    AS + A A + ++  G Q+H+ V  SG+ ++V   + L+ +YA+ G
Sbjct: 436 EMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCG 495

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
             K+A  +F+ +  +  ++WN LIS  AQ+G  +  LK F  M Q+G + +  + +S +S
Sbjct: 496 ISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSIS 555

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           A ++   I++G Q  ++   K     + E   +++ +  + G  ++A+    +M  + +E
Sbjct: 556 ASANLADIKQGKQ-IHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMT-KRNE 613

Query: 546 IMWSSVINSCRIH-KNLE 562
           + W+++I  C  H + LE
Sbjct: 614 VSWNTIITCCSQHGRGLE 631



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 230/426 (53%), Gaps = 1/426 (0%)

Query: 74  VTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           V FA  L  C        L+ ++HA  I  G +   II N L+D Y K   +  ARRVF+
Sbjct: 42  VDFACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFE 101

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           E+  +D+VS+ A+++G+A+ GL EEA++L+ EM   G  P+ +  ++ LSA        L
Sbjct: 102 ELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQL 161

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR +H  V K  F    FV NAL+ LY +      A ++F +M   D V++N +I+ +A 
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQ 221

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                 +L +F E+Q +         ++LL+  +   DL+ G+Q+H+  +      +  +
Sbjct: 222 CGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIM 281

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             SL+D+Y K G  EEA +IF +    + V W  M+ AY Q  +L ++ ++F  M  A +
Sbjct: 282 EGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGV 341

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ T+  +LR       + LG+Q+HS  I++GF S+++    L+DMY+K G L  A +
Sbjct: 342 RPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQR 401

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
               + E+++VSW ++I+   Q+   +  L++F++M   G  PD++ L S +SAC+    
Sbjct: 402 ILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKA 461

Query: 493 IEEGLQ 498
           + +G Q
Sbjct: 462 VHQGSQ 467



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 36/290 (12%)

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA-SAELASLSLGKQLHSFVIRSG 406
           ++ ++   + E+ L LF   CR  +      FA  LRA         L  ++H+  I  G
Sbjct: 13  LAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICG 72

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
                  G+ L+D+YAK G ++ A + F+E+  R+ VSW A++S  AQNG  +  ++ + 
Sbjct: 73  LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEG----LQYF-----------NSMTQKYKLRP 511
           +M +SG  P    L S+LSAC+   L + G    +Q +           N++   Y LR 
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLY-LRC 191

Query: 512 KKEHYASMV--DIL-CRSGCF-------------DEAEKLMAQMP---FEPDEIMWSSVI 552
           +    A  V  D+L C S  F             D A  +  +M      PD +  +S++
Sbjct: 192 RSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLL 251

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            +C    +L   K+    L K     D     ++ ++Y  +G  E   Q+
Sbjct: 252 AACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQI 301


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/773 (36%), Positives = 435/773 (56%), Gaps = 40/773 (5%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-------- 67
           Y K      AR+L     +   VSW+ LI GY Q  +  EA   + +M   G        
Sbjct: 92  YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTF 151

Query: 68  -------------------------------GSDPDYVTFATLLSGCSEPDTANELIQVH 96
                                          G  P+  + +T+L+ C+  +  N  ++VH
Sbjct: 152 SSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVH 211

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
             +IK GY+S     N+L+D Y K  C + A  VF E+P+ D VS+NA+I G      N+
Sbjct: 212 GYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKND 271

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
            A+KL  +M      PS FT ++AL A   +  + LGRQ+H+ ++K +   + FV   L+
Sbjct: 272 LALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLI 331

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+YSK   + +AR +F  MP  D + +N +I+ Y+      E++ LF  +     + +Q 
Sbjct: 332 DMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQT 391

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             ST+L   A         Q+HT +I +    +  VANSL+D Y KC   E+A ++F   
Sbjct: 392 TLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVC 451

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                V +T+MI+AY Q G  EEAL +++ M   +I  D   F+S+  A A L++   GK
Sbjct: 452 PAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGK 511

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+H  V++ G +S+VF+G++L++MYAK GS+ DA   F E+  R IVSW+A+I   AQ+G
Sbjct: 512 QIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHG 571

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
             +  L+ F  M+++G  P+ ++L+SVLSAC+H GL+ E  ++F  M + + + P +EHY
Sbjct: 572 HGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHY 631

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           A MVDIL R G  DEA  L+ +MPF+    +W +++ + RIHKN+E  + AA+ L  +E 
Sbjct: 632 ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEP 691

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
              +  ++ ++NIYA  G W++V++V+++M+   V+K    SW+ELK KV+ F   D  H
Sbjct: 692 -EKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSH 750

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
           P++ EI  K+++L + +   GY P     LHD ++  K + L +HSE+LA+AF LI TP 
Sbjct: 751 PRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPP 810

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G+PI V KNLR C DCH A K ISK+  REI VRD +RFHHF+DG CSC D+W
Sbjct: 811 GAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 251/502 (50%), Gaps = 45/502 (8%)

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           V+ Y K +C  +AR++  +  + D VS++ALI+G+ + G  EEA+  + EM  LG K ++
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 175 FTFAAAL-------------------------SAGV---------------GLADIALGR 194
           FTF++ L                         S G+               GL D   G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           +VH +++K  +  + F ANALLD+Y+K  C   A  +F E+P+ D VS+N +I     +E
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +   +LKL  ++   R   S F  S+ L   A    +++GRQ+H+  +      +  V  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+DMY+KCG  ++A+ +F  +     + W ++IS Y   G   EA++LF  M +  +  
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +Q T ++IL+++A   +    +Q+H+  I+SG+  + +  ++LLD Y K   L+DA + F
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           +  P  ++V++ ++I+A +Q G  +  LK +  M     +PD+    S+ +AC++    E
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +G Q  +    K  L        S+V++  + G  D+A  +  ++ +    + WS++I  
Sbjct: 509 QGKQ-IHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGG 566

Query: 555 CRIHKNLEFAKKAADQLFKMEK 576
              H +    +KA    ++M K
Sbjct: 567 LAQHGH---GRKALQLFYQMLK 585



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 46/314 (14%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL   A+K D+  G  IH + I    +         V++Y+KC  F  A+++  + S   
Sbjct: 57  LLQFTASK-DVSSGMAIHARIIRLGLLGLRNRL---VNLYSKCQCFRVARKLVIDSSEPD 112

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-- 398
            V W+A+IS YVQ G  EEAL  + EM       ++ TF+S+L+  +   +L LGKQ+  
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172

Query: 399 --------------------------------------HSFVIRSGFMSNVFSGSALLDM 420
                                                 H ++I+ G+ S+ FS +ALLDM
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAKSG  + AI  F E+P+ +IVSWNA+I+ C  +      LK    M      P   +L
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            S L AC+  GL++ G Q  +S   K  + P       ++D+  + G   +A  +   MP
Sbjct: 293 SSALKACAAIGLVKLGRQ-LHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351

Query: 541 FEPDEIMWSSVINS 554
            + D I+W+S+I+ 
Sbjct: 352 XK-DVIVWNSIISG 364


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/676 (39%), Positives = 407/676 (60%), Gaps = 2/676 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            F  LL  C+   +  +  +VHA I+K G      + N+L+  Y K   L  ARRVF  +
Sbjct: 49  VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             ++ VS+ A+I  F     N EA K +  M+  G KP   TF + L+A      + LG+
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           +VH  +V+        V  +L+ +Y+K   + +AR +F  +PE + V++ ++I  YA   
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           Q   +L+L   +Q      ++  F+++L        L+ G+++H   I +    E+ V N
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY KCG  EEA+++F++L H   V WTAM++ Y Q G  +EA+NLF  M +  I  
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKP 348

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D+ TF S+L + +  A L  GK++H  ++ +G+  +V+  SAL+ MYAK GS+ DA   F
Sbjct: 349 DKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVF 408

Query: 435 KEMPERNIVSWNALISA-CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
            +M ERN+V+W A+I+  CAQ+G  +  L+ F+ M + G +PD V+  SVLSAC+H GL+
Sbjct: 409 NQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLV 468

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           EEG ++F SM   Y ++P  EHY+  VD+L R+G  +EAE ++  MPF P   +W ++++
Sbjct: 469 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLS 528

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CR+H ++E  ++AA+ + K++   D A YVA+S+IYA AG++E   +V++ M +R V K
Sbjct: 529 ACRVHSDVERGERAAENVLKLDPDDDGA-YVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
               SW+E+  KVHVF   D+ HP++ +I  ++  L +++K+ GY PDT   LHD DEE 
Sbjct: 588 EPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQ 647

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K   L  HSERLAI + L+ TP G PI ++KNLR C DCH A K ISK+ GREI  RD+ 
Sbjct: 648 KERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQ 707

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHF DG CSC DFW
Sbjct: 708 RFHHFADGVCSCGDFW 723



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/489 (31%), Positives = 260/489 (53%), Gaps = 10/489 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+S Y K G+L  AR +F+S+ DR  VSWT +I  +   N+  EAFK +  M+
Sbjct: 81  NRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMK 140

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD VTF +LL+  + P+      +VH +I++ G      +  SLV  Y K   +
Sbjct: 141 L-AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDI 199

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR +F  +P+K+ V++  LI G+A++G  + A++L   MQ     P+  TFA+ L   
Sbjct: 200 SKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGC 259

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  G++VH +++++ +   ++V N+L+ +Y K   + EARKLF ++P  D V++ 
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWT 319

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+T YA    + E++ LFR +Q       +  F+++L+  ++   LQ G++IH Q +  
Sbjct: 320 AMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA 379

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA-YVQKGNLEEALNL 363
               +V + ++LV MYAKCG  ++A  +F  +S  + V WTA+I+    Q G   EAL  
Sbjct: 380 GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEY 439

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F +M +  I  D+ TF S+L A   +  +  G K   S  +  G    V   S  +D+  
Sbjct: 440 FDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 499

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDS---- 477
           ++G L++A      MP     S W AL+SAC  + D +   ++ E++++    PD     
Sbjct: 500 RAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLK--LDPDDDGAY 557

Query: 478 VSLLSVLSA 486
           V+L S+ +A
Sbjct: 558 VALSSIYAA 566



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 230/438 (52%), Gaps = 9/438 (2%)

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++   K G  +EA+ +   M   G +     F   L     L  +  GR+VHA ++K+  
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             N ++ N LL +Y+K   + +AR++F  + + + VS+  MI  +    +  E+ K +  
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           ++       +  F +LL+   N   LQ+G+++H + +      E +V  SLV MYAKCG 
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             +A+ IF  L   + V WT +I+ Y Q+G ++ AL L   M +A ++ ++ TFASIL+ 
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
               A+L  GK++H ++I+SG+   ++  ++L+ MY K G L++A + F ++P R++V+W
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            A+++  AQ G     +  F  M Q G +PD ++  SVL++CS    ++EG +    +  
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 506 K-YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC-----RIHK 559
             Y L    +  +++V +  + G  D+A  +  QM  E + + W+++I  C     R  +
Sbjct: 379 AGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGCCAQHGRCRE 435

Query: 560 NLEFAKKAADQLFKMEKL 577
            LE+  +   Q  K +K+
Sbjct: 436 ALEYFDQMKKQGIKPDKV 453



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 154/361 (42%), Gaps = 49/361 (13%)

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           A    + T+  +  +S   + G L+EAL +   M           F  +L+  A L SL 
Sbjct: 5   AGFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLE 64

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+++H+ +++SG   N +  + LL MYAK GSL DA + F  + +RNIVSW A+I A  
Sbjct: 65  QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV 124

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQY--- 499
                    K +E M  +G +PD V+ +S+L+A +           H  ++E GL+    
Sbjct: 125 AGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR 184

Query: 500 -FNSMTQKY-------KLR------PKKE--HYASMVDILCRSGCFDEAEKL---MAQMP 540
              S+   Y       K R      P+K    +  ++    + G  D A +L   M Q  
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
             P++I ++S++  C     LE  KK    + +    R+     ++  +Y   G  E   
Sbjct: 245 VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR 304

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           ++   +  R V      +W  + +       +DE             NL + M+++G KP
Sbjct: 305 KLFSDLPHRDV-----VTWTAMVTGYAQLGFHDE-----------AINLFRRMQQQGIKP 348

Query: 661 D 661
           D
Sbjct: 349 D 349



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGG-YSQKNQFREAFKLFV 61
           N +    + L+S Y K G++  A  +FN M +R  V+WT +I G  +Q  + REA + F 
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M+   G  PD VTF ++LS C+      E      +  + +G   ++   +  VD   +
Sbjct: 442 QMKKQ-GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 500

Query: 121 IRCLDLARRVFKEMP 135
              L+ A  V   MP
Sbjct: 501 AGHLEEAENVILSMP 515


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/754 (37%), Positives = 451/754 (59%), Gaps = 13/754 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTI----LIGGYSQKNQFREAF 57
           PN+ T+     ISG     + A   + F +  D +AVS  I    ++ GY    Q+    
Sbjct: 251 PNEITLRLLSRISG---DDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALL 307

Query: 58  KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           K F+DM  +   + D VTF  +L+     D+     QVH   +K G + +L + NSL++ 
Sbjct: 308 KCFMDM-VESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINM 366

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YCK+R + LAR VF  M ++D +S+N++I G A+  L  EA+ LF+++   G KP  +T 
Sbjct: 367 YCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTM 426

Query: 178 AAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            + L A   L + ++L +Q+H   +KTN V + FV+ AL+D YS++ C+ EA  LFG   
Sbjct: 427 TSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-N 485

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGR 295
             D V++N M++ Y  +    ++L+LF  L   + +RS  F  +T+L        +  G+
Sbjct: 486 NFDLVAWNAMMSGYTQSHDGHKTLELF-ALMHKQGERSDDFTLATVLKTCGFLFAINQGK 544

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   I +    ++ V++ ++DMY KCG    A+  F ++     V WT +IS  ++ G
Sbjct: 545 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENG 604

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             E AL++F +M    +  D+ T A++ +AS+ L +L  G+Q+H+  ++    S+ F G+
Sbjct: 605 EEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGT 664

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L+DMYAK GS+ DA   FK +   NI +WNA++   AQ+G+ +  L+ F+ M   G +P
Sbjct: 665 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKP 724

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D V+ + VLSACSH GL+ E  +Y  SM + Y ++P+ EHY+ + D L R+G   EAE L
Sbjct: 725 DKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENL 784

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  M  E    M+ +++ +CR+  + E  K+ A +L ++E L D++ YV +SN+YA A +
Sbjct: 785 IDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL-DSSAYVLLSNMYAAASK 843

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ +   +  M+   V+K   +SW+E+K+K+H+F  +D  +PQT  I +K++++++++K+
Sbjct: 844 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQ 903

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
           EGY P+T   L D +EE K  +L YHSE+LA+AF L++TP  +PI V+KNLR C DCH A
Sbjct: 904 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 963

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +K ISK+  REI +RD++RFH FKDG CSC D+W
Sbjct: 964 MKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 268/591 (45%), Gaps = 58/591 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQ-----FREAF 57
           N      N LIS Y K G+L  AR +F+ M +R  VSW  ++  Y+Q ++      +EAF
Sbjct: 78  NPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAF 137

Query: 58  KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
            LF  +R D       +T + +L  C            H    K G +    +  +LV+ 
Sbjct: 138 LLFRILRQDVVY-TSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNI 196

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   +   R +F+EMP +D V +N ++  + + G  EEAI L       G  P++ T 
Sbjct: 197 YLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
              LS   G  D +   QV +F       EN   A+A+ ++                   
Sbjct: 257 -RLLSRISG--DDSEAGQVKSF-------ENGNDASAVSEI------------------- 287

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              +S N +++ Y    QY   LK F ++  +  +  Q  F  +L+       L +G+Q+
Sbjct: 288 ---ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQV 344

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +       + V+NSL++MY K  +   A+ +F N+S    + W ++I+   Q    
Sbjct: 345 HCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLE 404

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EA+ LF+++ R  +  D  T  S+L+A++ L   LSL KQ+H   I++  +++ F  +A
Sbjct: 405 VEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTA 464

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+D Y+++  +K+A   F      ++V+WNA++S   Q+ D   TL+ F  M + G + D
Sbjct: 465 LIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSD 523

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL- 535
             +L +VL  C     I +G Q        Y ++   +     +D+   SG  D   K  
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQ-----VHAYAIKSGYD-----LDLWVSSGILDMYVKCG 573

Query: 536 ---MAQMPFE----PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
               AQ  F+    PD++ W+++I+ C  +   E A     Q+  M  L D
Sbjct: 574 DMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPD 624



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 219/484 (45%), Gaps = 57/484 (11%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK--EG 153
           HA I+    N    + N+L+  Y K   L  ARRVF +MP++D VS+N+++  +A+  EG
Sbjct: 69  HARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEG 128

Query: 154 LNE---EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + E   EA  LF  ++      S  T +  L   +    +      H +  K     + F
Sbjct: 129 VVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDF 188

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           VA AL+++Y K   V E R LF EMP  D V +N+M+  Y      +E++ L        
Sbjct: 189 VAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL-------- 240

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              S F  S L                H   I    +S +   +S      +   FE   
Sbjct: 241 --SSAFHTSGL----------------HPNEITLRLLSRISGDDSEA---GQVKSFENGN 279

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +  A    IS      ++S Y+  G     L  F++M  +++  DQ TF  +L  +  L 
Sbjct: 280 DASAVSEIISR---NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLD 336

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL+LG+Q+H   ++ G    +   ++L++MY K   +  A   F  M ER+++SWN++I+
Sbjct: 337 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIA 396

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             AQ+      +  F  +++ G +PD  ++ SVL A S    + EGL    S++++  + 
Sbjct: 397 GIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGL----SLSKQIHVH 449

Query: 511 PKKEH-------YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN----SCRIHK 559
             K +         +++D   R+ C  EAE L  +  F  D + W+++++    S   HK
Sbjct: 450 AIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF--DLVAWNAMMSGYTQSHDGHK 507

Query: 560 NLEF 563
            LE 
Sbjct: 508 TLEL 511



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 163/377 (43%), Gaps = 39/377 (10%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   +  +D+ LG+  HA ++        F+ N L+ +YSK   +  AR++F +MPE D 
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 241 VSYNVMITCYAWN-----EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           VS+N ++  YA +     E  KE+  LFR L+      S+   S +L +  +   +    
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASE 172

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
             H          +  VA +LV++Y K G+ +E + +F  + +   V W  M+ AY++ G
Sbjct: 173 SFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMG 232

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             EEA++L      + +  ++ T   + R S + +      Q+ SF              
Sbjct: 233 FKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSE---AGQVKSF-------------- 275

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
                  ++G+   A+          I+S N ++S     G   A LK F DMV+S  + 
Sbjct: 276 -------ENGNDASAVS--------EIISRNKILSGYLHAGQYSALLKCFMDMVESDLEC 320

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D V+ + VL+       +  G Q  + M  K  L        S++++ C+      A  +
Sbjct: 321 DQVTFILVLATAVRLDSLALG-QQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379

Query: 536 MAQMPFEPDEIMWSSVI 552
              M  E D I W+SVI
Sbjct: 380 FNNMS-ERDLISWNSVI 395



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 10/192 (5%)

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           LR +   + L LGK  H+ ++        F  + L+ MY+K GSL  A + F +MPER++
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 443 VSWNALISACAQNGDA-----QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           VSWN++++A AQ+ +      +     F  + Q       ++L  +L  C H G +    
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS- 171

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           + F+    K  L        ++V+I  + G   E   L  +MP+  D ++W+ ++ +   
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA--- 227

Query: 558 HKNLEFAKKAAD 569
           +  + F ++A D
Sbjct: 228 YLEMGFKEEAID 239


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/744 (37%), Positives = 429/744 (57%), Gaps = 30/744 (4%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L++ Y +SGNL++A ++F+ M  R  VS+  LI G +Q+     A  LF  M  
Sbjct: 286 TYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNL 345

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D    PD VT A+LLS C+         Q H+  IK G  S +++  SL+D Y K   + 
Sbjct: 346 DC-QKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIK 404

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A   F    Q D+++               ++ ++F +MQ  G  P+ FT+ + L    
Sbjct: 405 TAHEFFLCYGQLDNLN---------------KSFQIFTQMQIEGIVPNQFTYPSILKTCT 449

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L    LG Q+H  V+KT F  NV+V++ L+D+Y+KH  +  A K+F  + E D VS+  
Sbjct: 450 TLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTA 509

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  ++++ E+L LF+E+Q          F++ +S  A    L  GRQIH Q+ ++ 
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG 569

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              ++ + N+LV +YA+CG+  EA   F  +     V W +++S + Q G  EEALN+F 
Sbjct: 570 YSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFA 629

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A +  +  TF S + A+A +A++ +GKQ+H  + ++G+ S     +AL+ +YAK G
Sbjct: 630 QMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCG 689

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           ++ D             +SWN++I+  +Q+G     LK FEDM Q    P+ V+ + VLS
Sbjct: 690 TIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLS 736

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EG+ YF SM++ + L PK EHYA +VD+L RSG    A++ + +MP +PD 
Sbjct: 737 ACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDA 796

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C +HKN++  + AA  L ++E  +D+A YV +SN+YAV+G+W+   + ++ 
Sbjct: 797 MVWRTLLSACNVHKNIDIGEFAASHLLELEP-KDSATYVLVSNMYAVSGKWDCRDRTRQM 855

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RGV+K    SWVE+ + VH F A D+ HP+ + I   +  L     + GY P  +  
Sbjct: 856 MKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSL 915

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L D +   K  +   HSERLAIAF L++    +P+ V KNLR C DCH  IK +SKIT R
Sbjct: 916 LSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDR 975

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRDS RFHHFK G CSC+D+W
Sbjct: 976 VIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 285/572 (49%), Gaps = 52/572 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N LI  Y K+G L++A+++F ++  R +VSW  +I G SQ     EA  LF  + 
Sbjct: 198 STFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI- 256

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                         +LS C++ +      Q+H  ++K G++S   +CN+LV  Y +   L
Sbjct: 257 --------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNL 302

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A ++F  M Q+D VS+N+LI+G A++G    A+ LF +M     KP   T A+ LSA 
Sbjct: 303 SSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSAC 362

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +  G+Q H++ +K     ++ V  +LLDLY K   +  A + F            
Sbjct: 363 ASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF------------ 410

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
               CY   +   +S ++F ++Q      +QF + ++L          +G QIHTQ + T
Sbjct: 411 ---LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT 467

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                V V++ L+DMYAK G+ + A +IF  L     V WTAMI+ Y Q     EALNLF
Sbjct: 468 GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM    I +D   FAS + A A + +L  G+Q+H+    SG+  ++  G+AL+ +YA+ 
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +++A   F ++  ++ VSWN+L+S  AQ+G  +  L  F  M ++G + +S +  S +
Sbjct: 588 GKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAV 647

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKE------------------HYASMVDILCRS 526
           SA ++   +  G Q  + M +K     + E                   + SM+    + 
Sbjct: 648 SAAANIANVRIGKQ-IHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQH 706

Query: 527 GCFDEAEKL---MAQMPFEPDEIMWSSVINSC 555
           GC  EA KL   M Q+   P+ + +  V+++C
Sbjct: 707 GCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 177/623 (28%), Positives = 287/623 (46%), Gaps = 64/623 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y+  G+L  A  +F+ M  R+   W  +   +  +        LF  M T    + 
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKN-VEF 161

Query: 72  DYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           D   FA +L GCS    +   + Q+HA  I  G+ S   ICN L+D Y K   L  A++V
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F+ +  +DSVS+ A+I+G ++ G  EEA+ LF ++               LSA   +   
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFF 267

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+Q+H  V+K  F    +V NAL+ LYS+   +  A ++F  M + D VSYN +I+  
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A       +L LF+++            ++LLS  A+   L  G+Q H+  I     S++
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  SL+D+Y KC   + A E F                 Y Q  NL ++  +F +M   
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFL---------------CYGQLDNLNKSFQIFTQMQIE 432

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I  +Q T+ SIL+    L +  LG+Q+H+ V+++GF  NV+  S L+DMYAK G L  A
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           ++ F+ + E ++VSW A+I+   Q+      L  F++M   G + D++   S +SAC+  
Sbjct: 493 LKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552

Query: 491 GLIEEGLQYF---------------NSMTQKYKLRPK-KEHYA--------------SMV 520
             +++G Q                 N++   Y    K +E YA              S+V
Sbjct: 553 QALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLV 612

Query: 521 DILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
               +SG F+EA  + AQM     E +   + S +++     N+   K+    + K    
Sbjct: 613 SGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYD 672

Query: 578 RDAAPYVAMSNIYAVAGQWESVS 600
            +     A+  +YA  G  + +S
Sbjct: 673 SETEVSNALITLYAKCGTIDDIS 695



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 41/219 (18%), Positives = 78/219 (35%), Gaps = 22/219 (10%)

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           + G  L+D Y   G L  A+  F EMP R++  WN + +              F  M+  
Sbjct: 98  YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
             + D      VL  CS   +    ++  ++ T              ++D+  ++G    
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217

Query: 532 AEKLMAQMPFEPDEIMWSS---------------------VINSCRIHKNLEFAKKAADQ 570
           A+K+   +    D + W +                     V+++C   +  EF K+    
Sbjct: 218 AKKVFENLK-ARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGL 276

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           + K     +     A+  +Y+ +G   S  Q+   M +R
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR 315


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/781 (35%), Positives = 451/781 (57%), Gaps = 38/781 (4%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +T   N LI  Y K  +  +  ++F+ M +R  V+W  +I   +Q   F +A  LF+ M+
Sbjct: 310  DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G     +   + L++     D      ++H  +++   NS +I+ ++LVD Y K   +
Sbjct: 370  ESGYKSNRFNLGSILMASAGLADIGKGR-ELHGHLVRNLLNSDIILGSALVDMYSKCGMV 428

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSA 183
            + A +VF+ + +++ VS+NAL+ G+ +EG  EEA++L+ +MQ   G +P  FTF   L+ 
Sbjct: 429  EEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTL 488

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +   GRQ+HA +++ N  +N+ V   L+ +YS+   +  A+++F  M E +  S+
Sbjct: 489  CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 548

Query: 244  NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            N MI  Y  N + +E+L+LF+++Q        F  S++LS   +  D Q GR++H   + 
Sbjct: 549  NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 608

Query: 304  TTAISEVKVANSLVDMYAKCG-------------------------------RFEEAKEI 332
             T   E  +   LVDMYAKCG                               R  +AK +
Sbjct: 609  NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNL 668

Query: 333  FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
            F  +   +T  W ++++ Y  KG  +E+ N F+EM  ++I  D  T  +I+   + L +L
Sbjct: 669  FDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPAL 728

Query: 393  SLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
              G QLHS +I+ GF++ +V   +AL+DMY+K G++  A   F  M  +NIVSWNA+IS 
Sbjct: 729  EHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 788

Query: 452  CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
             +++G ++  L  +E+M + G  P+ V+ L++LSACSH GL+EEGL+ F SM + Y +  
Sbjct: 789  YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 848

Query: 512  KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
            K EHY  MVD+L R+G  ++A++ + +MP EP+   W +++ +CR+HK+++  + AA +L
Sbjct: 849  KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRL 908

Query: 572  FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
            F+++  ++  PYV MSNIYA AG+W+ V  +++ M+ +GV+K    SW+E+ S++ +F A
Sbjct: 909  FELDP-QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHA 967

Query: 632  NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY---HSERLAIA 688
              + HP+T EI   + +L  + K  GY PDTS  L +  +  + E  +Y   HSERLA++
Sbjct: 968  GSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALS 1027

Query: 689  FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
              LI+ P+ S I V KNLR C DCH A K ISKITGR I  RD++RFHHF++G CSC D+
Sbjct: 1028 LGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDY 1087

Query: 749  W 749
            W
Sbjct: 1088 W 1088



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 191/631 (30%), Positives = 324/631 (51%), Gaps = 21/631 (3%)

Query: 16  YVKSG---NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
           Y +SG   +L  AR+LF  M +R   +W  +I  Y++ + + E  +L+  MR  G    D
Sbjct: 116 YARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS-D 174

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             TF +++  C   +    + Q+ + ++K G N  L +  +LVD Y +   +D A     
Sbjct: 175 KFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLD 234

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           E+     V++NA+I G+ K    EEA  +F  M  +G  P +FTFA+AL     L     
Sbjct: 235 EIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 294

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+QVH+ ++   F  + FV NAL+D+Y+K D      K+F EM E + V++N +I+  A 
Sbjct: 295 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + ++L LF  +Q + +  ++F   ++L   A   D+  GR++H   +     S++ +
Sbjct: 355 FGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIIL 414

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRAN 371
            ++LVDMY+KCG  EEA ++F +L   + V + A+++ YVQ+G  EEAL L+ +M     
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  DQ TF ++L   A   + + G+Q+H+ +IR+    N+   + L+ MY++ G L  A 
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M ERN  SWN++I    QNG+ Q  L+ F+ M  +G +PD  SL S+LS+C    
Sbjct: 535 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP---DEIMW 548
             ++G +  N + +   +  +      +VD+  + G  D A K+  Q   +    + +M 
Sbjct: 595 DSQKGRELHNFIVRN-TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG-QWESVSQVKKAMR 607
           S+ +NS R +         A  LF   + R+ A + ++   YA  G + ES +   + M 
Sbjct: 654 SAFVNSGRAND--------AKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE-ML 704

Query: 608 ERGVRK--VTAYSWVELKSKVHVFTANDELH 636
           E  +    +T  + V L S +      D+LH
Sbjct: 705 ESDIEYDVLTMVTIVNLCSSLPALEHGDQLH 735



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 282/588 (47%), Gaps = 51/588 (8%)

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           + T   SD + + +++L+  C + ++      +H  +I  GYN    +   ++  Y +  
Sbjct: 61  IHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSG 120

Query: 123 CLD---LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           CLD    AR++F+EMP+++  ++N +I  +A+     E ++L+  M+  G     FTF +
Sbjct: 121 CLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPS 180

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            + A + + D+   RQ+ + VVK     N+FV  AL+D Y++   + +A     E+    
Sbjct: 181 VIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTS 240

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V++N +I  Y     ++E+  +F  +         F F++ L V         G+Q+H+
Sbjct: 241 VVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHS 300

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           + I      +  V N+L+DMYAKC   E   ++F  +   + V W ++ISA  Q G+  +
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 360

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF+ M  +   +++    SIL ASA LA +  G++LH  ++R+   S++  GSAL+D
Sbjct: 361 ALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVD 420

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSV 478
           MY+K G +++A Q F+ + ERN VS+NAL++   Q G A+  L+ + DM  + G QPD  
Sbjct: 421 MYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQF 480

Query: 479 SLLSVLSAC-----------------------------------SHCGLIEEGLQYFNSM 503
           +  ++L+ C                                   S CG +    + FN M
Sbjct: 481 TFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM 540

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF---EPDEIMWSSVINSCRIHKN 560
            ++         + SM++   ++G   EA +L  QM     +PD    SS+++SC    +
Sbjct: 541 AER-----NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSD 595

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ----WESVSQVKK 604
            +  ++  + + +     +    V + ++YA  G     W+   Q  K
Sbjct: 596 SQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIK 643



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 256/489 (52%), Gaps = 34/489 (6%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N + +  + L+  Y K G +  A ++F S+++R  VS+  L+ GY Q+ +  EA +L+ D
Sbjct: 409 NSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHD 468

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+++ G  PD  TF TLL+ C+     N+  Q+HA +I+      +I+   LV  Y +  
Sbjct: 469 MQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG 528

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A+ +F  M ++++ S+N++I G+ + G  +EA++LF +MQ  G KP  F+ ++ LS
Sbjct: 529 RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 588

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS----------------KHDCVV 226
           + V L+D   GR++H F+V+    E   +   L+D+Y+                K D ++
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648

Query: 227 ---------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
                          +A+ LF +M + +   +N ++  YA     KES   F E+  +  
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 708

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAK 330
           +       T++++ ++   L+ G Q+H+  I    ++  V +  +LVDMY+KCG   +A+
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKAR 768

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F N++  + V W AMIS Y + G  +EAL L+ EM +  +  ++ TF +IL A +   
Sbjct: 769 TVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTG 828

Query: 391 SLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G ++ + +       +     + ++D+  ++G L+DA +  ++MP E  + +W AL
Sbjct: 829 LVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGAL 888

Query: 449 ISACAQNGD 457
           + AC  + D
Sbjct: 889 LGACRVHKD 897


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/725 (37%), Positives = 424/725 (58%), Gaps = 2/725 (0%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  LF  M ++  VSW  L+ GY+Q    ++  KLF  M+ +  +     T +T+L GC+
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMK-ECETKFSKFTLSTVLKGCA 62

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
              +  E   +HA  ++ G      +  SLVD Y K   +  A +VF ++   D V+++A
Sbjct: 63  NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +ITG  ++G  +EA +LF  M+  G +P+ FT ++ +S    + D+  G+ +H  + K  
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  +  V+N L+ +Y K  CV +  K+F  M   D VS+N +++ +  ++      ++F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           ++    F  + F F ++L   ++ LD + G+Q+H   I  ++  +  V  +LVDMYAK  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E+A   F  L +     WT +IS Y Q    E+A+  F +M R  I  ++ T AS L 
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
             + +A+L  G+QLH+  +++G   ++F GSAL+D+Y K G ++ A   FK +  R+IVS
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN +IS  +Q+G  +  L++F  M+  G  PD  + + VLSACS  GL+EEG + F+SM+
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
           + Y + P  EHYA MVDIL R+G F+E +  + +M   P  ++W +V+ +C++H N++F 
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           +KAA +LF+ME + D++ Y+ +SNI+A  G+W+ V  ++  M  RG++K    SWVE+  
Sbjct: 543 EKAAKKLFEMEPMMDSS-YILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDG 601

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
           +VHVF + D  HP+  EI  K++ L Q +   GY P T   LH+   + K+E L YHSER
Sbjct: 602 QVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSER 661

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LA++FAL++T    PI + KNLR C DCH  +KLIS IT +EI VRD  RFHHFK G CS
Sbjct: 662 LALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCS 721

Query: 745 CRDFW 749
           C+D W
Sbjct: 722 CQDRW 726



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 242/473 (51%), Gaps = 15/473 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  A ++F  + +   V+W+ +I G  Q+   +EA +LF  MR   G+ P
Sbjct: 92  LVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRK-GARP 150

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T ++L+S  +          +H  I K+G+ S  ++ N L+  Y K RC++   +VF
Sbjct: 151 NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVF 210

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + M   D VS+NAL++GF          ++F +M   GFKP+ FTF + L +   L D  
Sbjct: 211 EAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPE 270

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+QVHA ++K +  ++ FV  AL+D+Y+K  C+ +A   F  +   D  S+ V+I+ YA
Sbjct: 271 FGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYA 330

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             +Q ++++K FR++Q      +++  ++ LS  ++   L+ GRQ+H   +      ++ 
Sbjct: 331 QTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIF 390

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++LVD+Y KCG  E A+ IF  L     V W  +IS Y Q G  E+AL  F  M    
Sbjct: 391 VGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEG 450

Query: 372 ISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           I  D+ATF  +L A + +  +  GK+   S     G   ++   + ++D+  ++G   + 
Sbjct: 451 IMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNE- 509

Query: 431 IQTFKEMPERNIVS----WNALISACAQNGD------AQATLKSFEDMVQSGY 473
           ++ F E  E N+      W  ++ AC  +G+      A   L   E M+ S Y
Sbjct: 510 VKIFIE--EMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSY 560



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 239/469 (50%), Gaps = 14/469 (2%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++LA R+F  MP+K+ VS+NAL+ G+A+ G  ++ +KLF +M+    K S FT +  L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+ +HA  +++    + F+  +L+D+YSK   V +A K+F ++   D V++
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MIT        +E+ +LF  ++      +QF  S+L+S   N  DL+ G+ IH     
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S+  V+N L+ MY K    E+  ++F  +++   V W A++S +           +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F +M       +  TF S+LR+ + L     GKQ+H+ +I++    + F G+AL+DMYAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           +  L+DA   F  +  R+I SW  +IS  AQ   A+  +K F  M + G +P+  +L S 
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY------ASMVDILCRSGCFDEAEKLMA 537
           LS CSH   +E G Q        + +  K  H+      +++VD+  + GC + AE +  
Sbjct: 361 LSGCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
            +    D + W+++I+    H   E A +A   +     + D A ++ +
Sbjct: 414 GL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGV 461



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 226/466 (48%), Gaps = 30/466 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + + +N LI  Y+KS  +    ++F +M +   VSW  L+ G+          ++F  M 
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245

Query: 65  TDGGSDPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            + G  P+  TF ++L  CS   +P+      QVHA IIK   +    +  +LVD Y K 
Sbjct: 246 LE-GFKPNMFTFISVLRSCSSLLDPEFGK---QVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
           RCL+ A   F  +  +D  S+  +I+G+A+    E+A+K F +MQ  G KP+++T A+ L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S    +A +  GRQ+HA  VK     ++FV +AL+DLY K  C+  A  +F  +   D V
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQ 300
           S+N +I+ Y+ + Q +++L+ FR +        +  F  +LS  +    ++ G++   + 
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSM 481

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF---ANLSHISTVPWTAMISAYVQKGNL 357
           + +      ++    +VD+  + G+F E K IF    NL+  S + W  ++ A    GN+
Sbjct: 482 SKIYGINPSIEHYACMVDILGRAGKFNEVK-IFIEEMNLTPYSLI-WETVLGACKLHGNV 539

Query: 358 ---EEALNLFIEM---------CRANISADQATFASILRASAELASLSLGKQLH-SFVIR 404
              E+A     EM           +NI A +  +  +    A + S  + K+   S+V  
Sbjct: 540 DFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEV 599

Query: 405 SG----FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
            G    F+S   S   + ++YAK   L  ++ +   +P+  +V  N
Sbjct: 600 DGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHN 645


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 265/675 (39%), Positives = 413/675 (61%), Gaps = 8/675 (1%)

Query: 78  TLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TL+   +   + ++  Q+HA  I+     + S  I+    +  Y  ++ L  A  VFK +
Sbjct: 10  TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLVFKTL 65

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
                +++ ++I  F  + L   A+  FVEM+  G  P    F + L +   + D+  G 
Sbjct: 66  ESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            VH F+V+     +++  NAL+++YSK   +   RK+F  MP  D VSYN +I  YA + 
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG 185

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            Y+++L++ RE+  +      F  S++L + +  +D+  G++IH   I     S+V + +
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGS 245

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SLVDMYAK  R E+++ +F++L    ++ W ++++ YVQ G   EAL LF +M  A +  
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
               F+S++ A A LA+L LGKQLH +V+R GF  N+F  SAL+DMY+K G+++ A + F
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M   + VSW A+I   A +G     +  FE+M + G +P+ V+ ++VL+ACSH GL++
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 425

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           E   YFNSMT+ Y L  + EHYA++ D+L R+G  +EA   +++M  EP   +WS++++S
Sbjct: 426 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C +HKNLE A+K A+++F ++   +   YV M N+YA  G+W+ +++++  +R++G+RK 
Sbjct: 486 CSVHKNLELAEKVAEKIFTIDS-ENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKK 544

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SW+E+K+K H F + D  HP  + I   ++ +M++M+KEGY  DTS  LHD DEE K
Sbjct: 545 PACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 604

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
            E L  HSERLA+AF +INT  G+ I V KN+R CTDCH AIK ISKIT REI VRD+SR
Sbjct: 605 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 664

Query: 735 FHHFKDGFCSCRDFW 749
           FHHF  G CSC D+W
Sbjct: 665 FHHFNRGSCSCGDYW 679



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 241/450 (53%), Gaps = 7/450 (1%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S +++IS Y     L  A  +F ++     ++W  +I  ++ ++ F  A   FV+MR  G
Sbjct: 41  SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASG 100

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              PD+  F ++L  C+          VH  I++ G +  L   N+L++ Y K+  +D  
Sbjct: 101 RC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSV 159

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF+ MP+KD VS+N +I G+A+ G+ E+A+++  EM     KP  FT ++ L      
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+  G+++H +V++     +V++ ++L+D+Y+K   + ++ ++F  +   D +S+N ++
Sbjct: 220 VDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLV 279

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y  N +Y E+L+LFR++   +       FS+++   A+   L +G+Q+H   +     
Sbjct: 280 AGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 339

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + +A++LVDMY+KCG  + A++IF  ++    V WTA+I  +   G+  EA++LF EM
Sbjct: 340 RNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEM 399

Query: 368 CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            R  +  +Q  F ++L A + +  +       +S     G    +   +A+ D+  ++G 
Sbjct: 400 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 459

Query: 427 LKDAIQTFKEM---PERNIVSWNALISACA 453
           L++A     +M   P  ++  W+ L+S+C+
Sbjct: 460 LEEAYDFISKMRVEPTGSV--WSTLLSSCS 487



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 184/365 (50%), Gaps = 40/365 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I+GY +SG                                + +A ++ 
Sbjct: 166 MPRKDVVSYNTVIAGYAQSG-------------------------------MYEDALRMV 194

Query: 61  VDMRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
            +M   G SD  PD  T +++L   SE     +  ++H  +I+ G +S + I +SLVD Y
Sbjct: 195 REM---GTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMY 251

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   ++ + RVF  + ++DS+S+N+L+ G+ + G   EA++LF +M     +P    F+
Sbjct: 252 AKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFS 311

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + + A   LA + LG+Q+H +V++  F  N+F+A+AL+D+YSK   +  ARK+F  M   
Sbjct: 312 SVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLH 371

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK--LDLQIGRQ 296
           D VS+  +I  +A +    E++ LF E++      +Q  F  +L+  ++   +D   G  
Sbjct: 372 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG-Y 430

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKG 355
            ++ T V     E++   ++ D+  + G+ EEA +  + +    T   W+ ++S+     
Sbjct: 431 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHK 490

Query: 356 NLEEA 360
           NLE A
Sbjct: 491 NLELA 495


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/749 (38%), Positives = 431/749 (57%), Gaps = 6/749 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           +++T+  N L+  Y K G L +A  +F  M D R   SW   I G  Q   F EA  LF 
Sbjct: 195 DRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFR 254

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M++DG S   Y T   +L  C+E    N   ++HA ++K G     I CN+L+  Y + 
Sbjct: 255 RMQSDGFSMNSYTTVG-VLQVCAELAQLNHGRELHAALLKCG-TEFNIQCNALLVMYARC 312

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D A RVF+E+  KD +S+N++++ + +  L  EAI  F EM   GF P      + L
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   L  +  GR+VHA+ VK     ++ +AN L+D+Y K   V  + ++F  M   D V
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHV 432

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+  +I CYA + +Y E++  FR  Q            ++L   +    + + +Q+H+  
Sbjct: 433 SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYA 492

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I    + ++ + N ++D+Y +CG    A  IF  L     V WT+M++ + + G L EA+
Sbjct: 493 I-RNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAV 551

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF +M  A I  D      IL A A L+SL+ GK++H F+IR  F       S+L+DMY
Sbjct: 552 ALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMY 611

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +  GS+  A++ F E   +++V W A+I+A   +G  +  +  F+ M+++G  PD VS L
Sbjct: 612 SGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFL 671

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           ++L ACSH  L++EG  Y + M  KYKL+P +EHYA +VD+L RSG  +EA K +  MP 
Sbjct: 672 ALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPL 731

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           EP  ++W +++ +CRIHKN E A  A D+L ++E   +   YV +SN++A  G+W +V +
Sbjct: 732 EPKSVVWCALLGACRIHKNHELAMIATDKLLELEP-DNPGNYVLVSNVFAEMGKWNNVKE 790

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG-YKP 660
           ++  M E+G+RK  A SW+E+ + VH FTA D  H  +  I  K+  + +++++EG Y  
Sbjct: 791 IRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVE 850

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTS  LHD  EE K++ L  HSERLAI+F LI+T  G+P+ + KNLR C DCH   KL+S
Sbjct: 851 DTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVS 910

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K+  REI VRD++RFHHF  G CSC DFW
Sbjct: 911 KLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/562 (30%), Positives = 286/562 (50%), Gaps = 12/562 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD---GGSDPD 72
           Y K G L  A  LF+ M  RT  SW  LIG         EA  ++  MR      G+ PD
Sbjct: 103 YGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPD 162

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             T A++L  C          +VH   +K G +   ++ N+LV  Y K   LD A RVF+
Sbjct: 163 GCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFE 222

Query: 133 EMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            M   +D  S+N+ I+G  + G+  EA+ LF  MQ  GF  + +T    L     LA + 
Sbjct: 223 WMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLN 282

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR++HA ++K     N+   NALL +Y++   V  A ++F E+ + D +S+N M++CY 
Sbjct: 283 HGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYV 341

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N  Y E++  F E+    F+       +LLS V +   L  GR++H   +     S+++
Sbjct: 342 QNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQ 401

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +AN+L+DMY KC   E +  +F  +     V WT +I+ Y Q     EA+  F    +  
Sbjct: 402 IANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEG 461

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D     SIL A + L S+SL KQ+HS+ IR+G +  +   + ++D+Y + G +  A+
Sbjct: 462 IKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILK-NRIIDIYGECGEVCYAL 520

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ + +++IV+W ++++  A+NG     +  F  M+ +G QPDSV+L+ +L A +   
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLS 580

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            + +G +    + +  K   +    +S+VD+    G  + A K+  +   + D ++W+++
Sbjct: 581 SLTKGKEIHGFLIRG-KFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAM 638

Query: 552 INSCRIHKNLEFAKKAADQLFK 573
           IN+  +H +     K A  +FK
Sbjct: 639 INATGMHGH----GKQAIYIFK 656



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 159/634 (25%), Positives = 260/634 (41%), Gaps = 72/634 (11%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYN 105
           +    REA +        G + P    +  +L   +     +E  Q+HA  +     G +
Sbjct: 31  KDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDD 90

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
               +   L+  Y K   L  A R+F  MP +   S+NALI      G   EA+ ++  M
Sbjct: 91  DAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAM 150

Query: 166 QH----LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
           +      G  P   T A+ L A     D   G +VH   VK+    +  VANAL+ +Y+K
Sbjct: 151 RASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAK 210

Query: 222 HDCVVEARKLFGEMPE-VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
              +  A ++F  M +  D  S+N  I+    N  + E+L LFR +Q   F  + +    
Sbjct: 211 CGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVG 270

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L V A    L  GR++H   +       ++  N+L+ MYA+CG  + A  +F  +    
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDKD 329

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            + W +M+S YVQ     EA++ F EM +   + D A   S+L A   L  L  G+++H+
Sbjct: 330 YISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHA 389

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           + ++    S++   + L+DMY K  S++ + + F  M  ++ VSW  +I+  AQ+     
Sbjct: 390 YAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSE 449

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYF---NSMTQK 506
            +  F    + G + D + + S+L ACS           H   I  GL      N +   
Sbjct: 450 AIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDI 509

Query: 507 Y-------------KLRPKKE--HYASMVDILCRSGCFDEAEKLMAQM---PFEPDEIM- 547
           Y             ++  KK+   + SMV+    +G   EA  L  +M     +PD +  
Sbjct: 510 YGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVAL 569

Query: 548 ---------WSSVINSCRIHKNLEFAK---------------------KAADQLFKMEKL 577
                     SS+     IH  L   K                       A ++F   K 
Sbjct: 570 VGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKC 629

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +D   + AM N   + G  +    + K M E GV
Sbjct: 630 KDVVLWTAMINATGMHGHGKQAIYIFKRMLETGV 663



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 19/223 (8%)

Query: 346 AMISAYVQKGNLEEAL-NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           A +    + G+L EAL  L     R         +  +L   A   ++S G+QLH+  + 
Sbjct: 24  ASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVA 83

Query: 405 SGFMSN---VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +G + +    F  + LL MY K G L DA + F  MP R + SWNALI AC  +G A   
Sbjct: 84  TGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEA 143

Query: 462 LKSFEDMVQS----GYQPDSVSLLSVLSAC-----SHCGLIEEGLQYFNSMTQKYKLRPK 512
           +  +  M  S    G  PD  +L SVL AC       CG    GL   + + +   +   
Sbjct: 144 VGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVAN- 202

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
                ++V +  + G  D A ++   M    D   W+S I+ C
Sbjct: 203 -----ALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/750 (36%), Positives = 428/750 (57%), Gaps = 38/750 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N++IS Y   GNL  AR+LFN    + +++W+ L+ GY +     E  + F
Sbjct: 63  MPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQF 122

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M +DG   P   T  ++L  CS     +    +H   IK    + + +   LVD Y K
Sbjct: 123 SQMWSDG-QKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSK 181

Query: 121 IRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +CL  A  +F  +P +K+ V + A++TG+A+ G + +AI+ F EM++ G + + FTF +
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++  A GRQVH  ++ + F  NV+V +AL+D+Y+K   +  AR +   M   D
Sbjct: 242 ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDD 301

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V +N MI     +   +E+L LF ++         F + ++L  +A+  +L+IG  +H+
Sbjct: 302 VVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHS 361

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            TI T   +   V+N+LVDMYAK G    A ++F  +     + WT++++ YV  G  E+
Sbjct: 362 LTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK 421

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF +M  A +  DQ   A +  A AEL  +  G+Q+H+  I+S   S + + ++L+ 
Sbjct: 422 ALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLIT 481

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G L+DAI+ F  M  RN++SW A+I   AQNG                       
Sbjct: 482 MYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG----------------------- 518

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                       L+E G  YF SM + Y ++P  +HYA M+D+L R+G  +EAE L+ +M
Sbjct: 519 ------------LVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRM 566

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  +W S++++CR+H NLE  ++A   L K+E   ++ PYV +SN+++VAG+WE  
Sbjct: 567 DVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEP-SNSLPYVLLSNMFSVAGRWEDA 625

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           + +++AM+  G+ K   YSW+E+KS+VH F + D  HP   EI  KI+ +M  +K+ G+ 
Sbjct: 626 AHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHV 685

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD + AL D DEE K  SL YHSE+LA+AF L+   +G+PI + KNLR C DCH+A+K I
Sbjct: 686 PDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYI 745

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S I  R I +RD + FHHF +G CSC DFW
Sbjct: 746 SSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 187/393 (47%), Gaps = 38/393 (9%)

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL----- 266
           +N LL   SK+  V EARKLF +MP  D  ++N+MI+ YA      E+ KLF E      
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99

Query: 267 ---------------------QFTRF-----DRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                                QF++        SQ+   ++L   +    L  G+ IH  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEE 359
            I     + + VA  LVDMY+KC    EA+ +F +L    + V WTAM++ Y Q G   +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+  F EM    + ++  TF SIL A   +++ + G+Q+H  +I SGF  NV+  SAL+D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G L  A      M   ++V WN++I  C  +G  +  L  F  M     + D  +
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             SVL + + C  ++ G +  +S+T K      K    ++VD+  + G    A  +  ++
Sbjct: 340 YPSVLKSLASCKNLKIG-ESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             + D I W+S++    +H    F +KA  QLF
Sbjct: 399 -LDKDVISWTSLVTG-YVHNG--FHEKAL-QLF 426


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/811 (33%), Positives = 458/811 (56%), Gaps = 81/811 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N ++ N++++GY K G+L+ A ELF  M  R   SW  L+ GY Q  +F +A + FV MR
Sbjct: 94  NVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMR 153

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS----------ILIIC--- 111
             G S P+  TF   +  C         +Q+   + KFG+            + + C   
Sbjct: 154 RSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213

Query: 112 ------------------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
                             NS++  Y K   +D A  +F+ MP++D VS+N +++  ++ G
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              EA+ + V+M + G +    T+ ++L+A   L+ +  G+Q+HA V+++    + +VA+
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           A+++LY+K  C  EAR++F  + + + VS+ V+I  +     + ESL+LF +++      
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            QF  +T++S  +N++D+ + RQ+H+ ++ +     V ++NSL+ MYAKCG  + A+ IF
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIF 453

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA------------------- 374
           +++     V WT M++AY Q GN+ +A   F  M   N+                     
Sbjct: 454 SSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLK 513

Query: 375 -------------DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                        D  T+ ++ R  A++ +  LG Q+    ++ G + +    +A++ MY
Sbjct: 514 MYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMY 573

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +K G + +A + F  +  +++VSWNA+I+  +Q+G  +  ++ F+DM++ G +PD +S +
Sbjct: 574 SKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYV 633

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           +VLS+CSH GL++EG  YF+ + + + + P  EH++ MVD+L R+G   EA+ L+ +MP 
Sbjct: 634 AVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPM 693

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +P   +W +++++C+ H N E A+ AA  LF ++   D+  Y+ ++ IYA AG+    +Q
Sbjct: 694 KPTAEVWGALLSACKTHGNNELAELAAKHLFDLDS-PDSGGYMLLAKIYADAGKSVDSAQ 752

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+K MR++G++K   YSW+E+K+KVHVF A D  HPQ   IR K++ LM+++ + GY   
Sbjct: 753 VRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGY--- 809

Query: 662 TSCALHDEDEEIKVESLK---YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
                      ++ ESL+   +HSE+LA+AF ++N P   PI +MKNLR C DCH  IKL
Sbjct: 810 -----------VRTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKL 858

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IS +TGRE  +RD+ RFHHFK G CSC D+W
Sbjct: 859 ISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 124/237 (52%), Gaps = 1/237 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   +++ Y + GN+  ARE F+ M  R  ++W  ++G Y Q     +  K++
Sbjct: 456 MEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMY 515

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M T+    PD+VT+ TL  GC++        Q+    +K G      + N+++  Y K
Sbjct: 516 SAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSK 575

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR++F  + +KD VS+NA+ITG+++ G+ ++AI++F +M   G KP   ++ A 
Sbjct: 576 CGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAV 635

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           LS+      +  G+     + +  N    +   + ++DL ++   ++EA+ L  EMP
Sbjct: 636 LSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMP 692



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 50/309 (16%)

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG---- 425
           ++++  QA  A  LR+     +L+  + LH  ++  G  S VF  + LL  Y   G    
Sbjct: 23  SHMAVTQA-LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPD 81

Query: 426 ----------------------------SLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
                                       SL DA + F  MP R++ SWN L+S   Q+G 
Sbjct: 82  ARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGR 141

Query: 458 AQATLKSFEDMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
               ++SF  M +SG   P++ +    + +C   G  E  LQ    +T K+  +   +  
Sbjct: 142 FLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLT-KFGFQGDPDVA 200

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK----AADQLF 572
             +VD+  R G  D A K  +Q+   P           CR      +AK      A +LF
Sbjct: 201 TGIVDMFVRCGAVDFASKQFSQIE-RPTVF--------CRNSMLAGYAKSYGVDHALELF 251

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFT 630
           +    RD   +  M +  + +G+      V   M  RGVR    T  S +   +K+    
Sbjct: 252 ESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLG 311

Query: 631 ANDELHPQT 639
              +LH Q 
Sbjct: 312 WGKQLHAQV 320


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/740 (37%), Positives = 429/740 (57%), Gaps = 6/740 (0%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  Y K G +  A  +F  M  + AVSW  L+ G++Q     +   LF  M    GS+ 
Sbjct: 270  LVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT---GSEI 326

Query: 72   DY--VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            ++   T +T+L GC+          VH+  I+ G      I   LVD Y K      A +
Sbjct: 327  NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF  +   D VS++A+IT   ++G + EA ++F  M+H G  P+ FT A+ +SA   L D
Sbjct: 387  VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGD 446

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            +  G  +HA V K  F  +  V NAL+ +Y K   V +  ++F      D +S+N +++ 
Sbjct: 447  LYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSG 506

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            +  NE     L++F ++    F+ + + F ++L   ++  D+ +G+Q+H Q +  +    
Sbjct: 507  FHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 566

Query: 310  VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
              V  +LVDMYAK    E+A+ IF  L       WT +++ Y Q G  E+A+  FI+M R
Sbjct: 567  DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 626

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
              +  ++ T AS L   + +A+L  G+QLHS  I++G   ++F  SAL+DMYAK G ++D
Sbjct: 627  EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVED 686

Query: 430  AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            A   F  +  R+ VSWN +I   +Q+G     LK+FE M+  G  PD V+ + VLSACSH
Sbjct: 687  AEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 746

Query: 490  CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             GLIEEG ++FNS+++ Y + P  EHYA MVDIL R+G F E E  + +M    + ++W 
Sbjct: 747  MGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWE 806

Query: 550  SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            +V+ +C++H N+EF ++AA +LF++E   D+  Y+ +SN++A  G W+ V+ V+  M  R
Sbjct: 807  TVLGACKMHGNIEFGERAAMKLFELEPEIDSN-YILLSNMFAAKGMWDDVTNVRALMSTR 865

Query: 610  GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            GV+K    SWVE+  +VHVF ++D  HP+  EI  K+++L Q++   GY P+T   LH+ 
Sbjct: 866  GVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNV 925

Query: 670  DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
             +  K E L YHSERLA+AFAL++T     I + KNLR C DCH  +K IS+IT +E+ V
Sbjct: 926  SDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVV 985

Query: 730  RDSSRFHHFKDGFCSCRDFW 749
            RD + FHHFK+G CSC++FW
Sbjct: 986  RDINCFHHFKNGSCSCQNFW 1005



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 259/477 (54%), Gaps = 2/477 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           ++ +L  C+     NE   +H  +IK G N    + NSLV+ Y K    + A +VF E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           ++D VS+ ALITGF  EG    A+ LF EM+  G + ++FT+A AL A     D+  G+Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VHA  +K     ++FV +AL+DLY+K   +V A ++F  MP+ + VS+N ++  +A    
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            ++ L LF  +  +  + S+F  ST+L   AN  +L+ G+ +H+  I      +  ++  
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMY+KCG   +A ++F  +     V W+A+I+   QKG   EA  +F  M  + +  +
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q T AS++ A+ +L  L  G+ +H+ V + GF  +    +AL+ MY K GS++D  + F+
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
               R+++SWNAL+S    N      L+ F  M+  G+ P+  + +S+L +CS    ++ 
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 550

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G Q  ++   K  L        ++VD+  ++   ++AE +  ++  + D   W+ ++
Sbjct: 551 GKQ-VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIV 605



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 13/181 (7%)

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           ++ ++  CA  GD          +++SG  PDS    S+++  + CG      + F  + 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNL 561
           ++  +      + +++      G    A  L  +M     E +E  +++ + +C +  +L
Sbjct: 191 ERDVVS-----WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDL 245

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           EF K+   +  K+    D     A+ ++YA  G+     +V   M      K  A SW  
Sbjct: 246 EFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM-----PKQNAVSWNA 300

Query: 622 L 622
           L
Sbjct: 301 L 301


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/746 (38%), Positives = 435/746 (58%), Gaps = 9/746 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ YV+ G+  +AR+LF+ M DR  V+W  LI GY+Q     +A  +  +M  +G  
Sbjct: 39  NTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFL 98

Query: 70  DPDYVTFATLLSGCSEPDT-ANELIQVHADIIKFGYNSILI-ICNSLVDSYCKIRCLDLA 127
            P+   F + +  C E      +  QVH   I+ G N   + + N L++ Y K   +D A
Sbjct: 99  -PNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHA 157

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  M  KDSVS+N++ITG  +    E+A+K +  M+  G  PS+F   +ALS+   L
Sbjct: 158 RSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASL 217

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             I LG+Q H   +K     +V V+N LL LY++   + E +K+F  M E D VS+N +I
Sbjct: 218 GCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVI 277

Query: 248 TCYA-WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
              A       E++++F E+    +  ++  F  LL+ V++    ++  QIH   +    
Sbjct: 278 GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNV 337

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFI 365
             +  + N+L+  Y K G  E  +EIF+ +S     V W +MIS Y+    L +A++L  
Sbjct: 338 KDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVW 397

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M +     D  TFA++L A A +A+L  G ++H+  IR+   S+V  GSAL+DMY+K G
Sbjct: 398 LMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCG 457

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            +  A + F  MP RN+ SWN++IS  A++G     L+ F  M  SG  PD ++ + VLS
Sbjct: 458 RIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLS 517

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EG +YF SMT+ Y L P+ EHY+ MVD+L R+G  D+ E  + +MP +P+ 
Sbjct: 518 ACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNI 577

Query: 546 IMWSSVINSC--RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           ++W +V+ +C     +  E  ++AA+ LF M+  ++A  YV +SN+YA  G+WE +++ +
Sbjct: 578 LIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP-QNAVNYVLLSNMYASGGKWEDMARTR 636

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           +AMRE  V+K    SWV +K  VHVF A D  HP+   I  K++ L ++++  GY P   
Sbjct: 637 RAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIK 696

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            AL+D + E K E L YHSE+LA+AF L     G PI +MKNLR C DCH+A K ISK+ 
Sbjct: 697 FALYDLEPENKEELLSYHSEKLAVAFVLTRN-SGLPIRIMKNLRVCGDCHSAFKYISKVV 755

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            R I +RDS+RFHHF+DG CSCRD+W
Sbjct: 756 DRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 290/562 (51%), Gaps = 17/562 (3%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           H +++K G++S L +CN+L++ Y +I     AR++F EMP ++ V++  LI+G+ + G+ 
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGV-GLADIALGRQVHAFVVKTNFVE-NVFVAN 213
           E+A  +  EM   GF P+ F F +A+ A    +     GRQVH + ++T   +  V V N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            L+++Y+K   +  AR +FG M + D VS+N MIT    N+ +++++K +  ++ T    
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           S F   + LS  A+   + +G+Q H + I      +V V+N+L+ +YA+  R  E +++F
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 334 ANLSHISTVPWTAMISAYVQKG-NLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           + +     V W  +I A    G ++ EA+ +F+EM RA  S ++ TF ++L   + L++ 
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISA 451
            L  Q+H+ +++     +    +ALL  Y KSG +++  + F  M E R+ VSWN++IS 
Sbjct: 323 KLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
              N      +     M+Q G + D  +  +VLSAC+    +E G++  ++   +  L  
Sbjct: 383 YIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME-VHACAIRACLES 441

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                +++VD+  + G  D A +    MP   +   W+S+I+    H + + A +   ++
Sbjct: 442 DVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
               +L D   +V + +  +  G  +   +  K+M E        Y    L  +V  ++ 
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE-------VYG---LVPRVEHYSC 550

Query: 632 NDELHPQTNEIRRKIENLMQEM 653
             +L  +  E+  KIEN + +M
Sbjct: 551 MVDLLGRAGEL-DKIENFINKM 571



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 165/323 (51%), Gaps = 4/323 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKN-QFREAFKLFVDMRTDG 67
           +N L++ Y ++  LA  +++F+ M++R  VSW  +IG  +       EA ++F++M   G
Sbjct: 242 SNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAG 301

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            S P+ VTF  LL+  S   T+    Q+HA I+K+       I N+L+  Y K   ++  
Sbjct: 302 WS-PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC 360

Query: 128 RRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
             +F  M + +D VS+N++I+G+    L  +A+ L   M   G +   FTFA  LSA   
Sbjct: 361 EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACAT 420

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +A +  G +VHA  ++     +V + +AL+D+YSK   +  A + F  MP  +  S+N M
Sbjct: 421 VATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSM 480

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTT 305
           I+ YA +     +L+LF  ++ +        F  +LS  ++   +  G +   + T V  
Sbjct: 481 ISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYG 540

Query: 306 AISEVKVANSLVDMYAKCGRFEE 328
            +  V+  + +VD+  + G  ++
Sbjct: 541 LVPRVEHYSCMVDLLGRAGELDK 563



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G +  A   FN M  R   SW  +I GY++      A +LF  M+
Sbjct: 442 DVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMK 501

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
              G  PD++TF  +LS CS     +E
Sbjct: 502 LS-GQLPDHITFVGVLSACSHIGLVDE 527


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/670 (40%), Positives = 399/670 (59%), Gaps = 33/670 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-F 170
           N+L+ SY K+ CL    RVF  MP +D VS+N+LI+ +A  G   +++K +  M + G F
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
             +    +  L        + LG QVH  VVK  F   VFV + L+D+YSK   V  AR+
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 231 LFGEMPEV-------------------------------DGVSYNVMITCYAWNEQYKES 259
            F EMPE                                D +S+  MI  +  N   +E+
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           + LFRE++    +  Q+ F ++L+     + LQ G+Q+H   I T     + V ++LVDM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KC   + A+ +F  ++  + V WTAM+  Y Q G  EEA+ +F +M    I  D  T 
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG +S +   +AL+ +Y K GS++D+ + F EM  
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            + VSW AL+S  AQ G A  TL+ FE M+  G++PD V+ + VLSACS  GL+++G Q 
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F SM +++++ P ++HY  M+D+  R+G  +EA K + +MPF PD I W+S+++SCR H+
Sbjct: 499 FESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHR 558

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N+E  K AA+ L K+E   + A Y+ +S+IYA  G+WE V+ ++K MR++G+RK    SW
Sbjct: 559 NMEIGKWAAESLLKLEP-HNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSW 617

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ K++VH+F+A+D+ +P +++I  ++E L  +M +EGY PD +  LHD D+  K++ L 
Sbjct: 618 IKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLN 677

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           +HSE+LAIAF LI  P G PI V+KNLR C DCH A K ISKIT REI VRD++RFH FK
Sbjct: 678 HHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFK 737

Query: 740 DGFCSCRDFW 749
           DG CSC DFW
Sbjct: 738 DGRCSCGDFW 747



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 255/485 (52%), Gaps = 33/485 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  S N L+S Y K   L     +F++M  R  VSW  LI  Y+ +    ++ K +
Sbjct: 70  MPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY 129

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G  + + +  +T+L   S+    +  +QVH  ++KFG+ S + + + LVD Y K
Sbjct: 130 NLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSK 189

Query: 121 IRCLDLARRVFKEMPQK-------------------------------DSVSFNALITGF 149
              +  AR+ F EMP+K                               DS+S+ A+I GF
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL+ EAI LF EM+    +   +TF + L+A  G+  +  G+QVHA++++T++ +N+
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+Y K   +  A  +F +M   + VS+  M+  Y  N   +E++K+F ++Q  
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             +   F   +++S  AN   L+ G Q H + +V+  IS + V+N+LV +Y KCG  E++
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F+ +S++  V WTA++S Y Q G   E L LF  M       D+ TF  +L A +  
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G Q+   +I+   +  +    + ++D+++++G L++A +   +MP   + + W +
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549

Query: 448 LISAC 452
           L+S+C
Sbjct: 550 LLSSC 554



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 200/361 (55%), Gaps = 5/361 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N V  N LI+G ++   +  +R+LF  M ++ ++SWT +I G++Q    REA  LF
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +MR +   + D  TF ++L+ C       E  QVHA II+  Y   + + ++LVD YCK
Sbjct: 263 REMRLEN-LEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK 321

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +  A  VF++M  K+ VS+ A++ G+ + G +EEA+K+F +MQ+ G +P DFT  + 
Sbjct: 322 CKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSV 381

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G Q H   + +  +  + V+NAL+ LY K   + ++ +LF EM  VD 
Sbjct: 382 ISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDE 441

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  +++ YA   +  E+L+LF  +    F   +  F  +LS  +    +Q G QI   
Sbjct: 442 VSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFES 501

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHIS--TVPWTAMISAYVQKGNL 357
            I    I  ++   + ++D++++ GR EEA++ F N    S   + W +++S+     N+
Sbjct: 502 MIKEHRIIPIEDHYTCMIDLFSRAGRLEEARK-FINKMPFSPDAIGWASLLSSCRFHRNM 560

Query: 358 E 358
           E
Sbjct: 561 E 561



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 214/424 (50%), Gaps = 65/424 (15%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE---------------- 237
           +++H  ++K      +F+ N L+  Y+K D +  AR++F +MP+                
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 238 ---------------VDGVSYNVMITCYAWNEQYKESLKLFRELQFT-RFDRSQFPFSTL 281
                           D VS+N +I+ YA      +S+K +  + +   F+ ++   ST+
Sbjct: 89  ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK------------------- 322
           L + + +  + +G Q+H   +     S V V + LVDMY+K                   
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208

Query: 323 ------------CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
                       C R E+++++F ++    ++ WTAMI+ + Q G   EA++LF EM   
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLE 268

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N+  DQ TF S+L A   + +L  GKQ+H+++IR+ +  N+F GSAL+DMY K  S+K A
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA 328

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F++M  +N+VSW A++    QNG ++  +K F DM  +G +PD  +L SV+S+C++ 
Sbjct: 329 ETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANL 388

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             +EEG Q F+       L        ++V +  + G  +++ +L ++M +  DE+ W++
Sbjct: 389 ASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTA 446

Query: 551 VINS 554
           +++ 
Sbjct: 447 LVSG 450



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 93/178 (52%), Gaps = 7/178 (3%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N++S + LL  Y+K   L +  + F  MP R++VSWN+LISA A  G    ++K++  M+
Sbjct: 74  NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133

Query: 470 QSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
            +G +  + ++L ++L   S  G +  GLQ    +  K+  +      + +VD+  ++G 
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVV-KFGFQSYVFVGSPLVDMYSKTGL 192

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
              A +   +MP E + +M++++I        +E ++    QLF   + +D+  + AM
Sbjct: 193 VFCARQAFDEMP-EKNVVMYNTLIAGLMRCSRIEDSR----QLFYDMQEKDSISWTAM 245


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 286/754 (37%), Positives = 448/754 (59%), Gaps = 13/754 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++V+ N LIS Y K G    A  +F  M   R  +SW+ ++  ++  N    A   FVDM
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIR 122
             + G  P+   FA     CS  +  +    +   ++K GY  S + +   L+D + K R
Sbjct: 160 -IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR 218

Query: 123 C-LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  A +VF++MP++++V++  +IT   + G   EAI LF+EM   G++P  FT +  +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-----ARKLFGEMP 236
           SA   +  + LG+Q+H+  ++     +  V   L+++Y+K  C V+     ARK+F ++ 
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK--CSVDGSMCAARKIFDQIL 336

Query: 237 EVDGVSYNVMITCYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           + +  S+  MIT Y     Y +E+L LFR +  T    + F FS+ L   AN   L+IG 
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+ T  +     S   VANSL+ MYA+ GR ++A++ F  L   + + +  +I AY +  
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           N EEAL LF E+    + A   TFAS+L  +A + ++  G+Q+H+ VI+SG   N    +
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+ MY++ G+++ A Q F++M +RN++SW ++I+  A++G A   L+ F  M++ G +P
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ ++VLSACSH GL+ EG ++F SM  ++ + P+ EHYA MVDIL RSG   EA + 
Sbjct: 577 NLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQF 636

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MP++ D ++W + + +CR+H NLE  K AA  + + E   D A Y+ +SN+YA   +
Sbjct: 637 INSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEP-HDPAAYILLSNLYASTSK 695

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ VS ++KAM+E+ + K    SWVE+++KVH F   D  HP+  EI  +++NL  ++KK
Sbjct: 696 WDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKK 755

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY P+    LHD +EE K + L  HSE++A+AF LI+T +  PI V KNLR C DCH+A
Sbjct: 756 LGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSA 815

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IK IS  TGREI VRD++RFHH KDG CSC ++W
Sbjct: 816 IKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 166/558 (29%), Positives = 291/558 (52%), Gaps = 22/558 (3%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           GS PD  T++  L  C    + +    VH  + +       +  NSL+  Y K    + A
Sbjct: 61  GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120

Query: 128 RRVFKEM-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
             +F+ M   +D +S++A+++ FA   +   A+  FV+M   G+ P+++ FAAA  A   
Sbjct: 121 TSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST 180

Query: 187 LADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVSYN 244
              +++G  +  FVVKT +++ +V V   L+D++ K    +V A K+F +MPE + V++ 
Sbjct: 181 AEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +MIT         E++ LF E+  + ++  +F  S ++S  AN   L +G+Q+H+Q I  
Sbjct: 241 LMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300

Query: 305 TAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL-EEA 360
               +  V   L++MYAKC   G    A++IF  +   +   WTAMI+ YVQKG   EEA
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+LF  M   ++  +  TF+S L+A A LA+L +G+Q+ +  ++ GF S     ++L+ M
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YA+SG + DA + F  + E+N++S+N +I A A+N +++  L+ F ++   G    + + 
Sbjct: 421 YARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTF 480

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            S+LS  +  G I +G Q  ++   K  L+  +    +++ +  R G  + A ++   M 
Sbjct: 481 ASLLSGAASIGTIGKGEQ-IHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM--EKLR-DAAPYVAM----SNIYAVA 593
            + + I W+S+I     H    FA +A +   KM  E +R +   Y+A+    S++  V 
Sbjct: 540 -DRNVISWTSIITGFAKHG---FATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVN 595

Query: 594 GQWESVSQVKKAMRERGV 611
             W+     K    E GV
Sbjct: 596 EGWK---HFKSMYTEHGV 610



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 15/412 (3%)

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G   +AI     M H G  P   T++  L   +      +G  VH  + +++   +    
Sbjct: 45  GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           N+L+ LYSK     +A  +F  M    D +S++ M++C+A N     +L  F ++    +
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC-GRFEEA 329
             +++ F+      +    + +G  I    + T  + S+V V   L+DM+ K  G    A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F  +   + V WT MI+  +Q G   EA++LF+EM  +    D+ T + ++ A A +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWN 446
             L LG+QLHS  IR G   +   G  L++MYAK    GS+  A + F ++ + N+ SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 447 ALISACAQNG--DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           A+I+   Q G  D +A L  F  M+ +   P+  +  S L AC++   +  G Q F   T
Sbjct: 345 AMITGYVQKGGYDEEA-LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF---T 400

Query: 505 QKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              KL     +    S++ +  RSG  D+A K    + FE + I +++VI++
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAF-DILFEKNLISYNTVIDA 451


>gi|414876781|tpg|DAA53912.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 878

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/481 (53%), Positives = 348/481 (72%), Gaps = 3/481 (0%)

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L+LFRE+Q   FDR   PF++LLSV     D++IGRQIH Q I+     E  + N+L+D
Sbjct: 2   ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY+KCG  + AK IFAN S  + + WTA+I+  VQ G  EEAL LF  M RA +S D+AT
Sbjct: 62  MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
            +SI+++S+ L  + +G+QLH+++  SG MS+VFSGSALLDMYAK G L +AI+TF EMP
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           E+N ++WNA+ISA AQ G A+  ++ F+ M+  G+ PD V+ LSVL+ACSH GL EE ++
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGLAEECMK 241

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           YF+ M     + P KEHY+ ++D L R+GCFD+ +K++ +MPFE D ++WSS+++SCRI+
Sbjct: 242 YFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSCRIY 301

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            N + A  AA+ LF M    DA  YV +SNIYA AG WE  ++VKK MR+RGVRK +  S
Sbjct: 302 GNQDLATVAAENLFTMVPT-DATAYVILSNIYAKAGNWEGAARVKKIMRDRGVRKESGNS 360

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
           WVE+K K+++F++ND  +P  +EI+ ++E L +EM K+GY+PDTSCALH  D + K+ESL
Sbjct: 361 WVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEMDKQGYEPDTSCALHMVDNKQKLESL 420

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV--RDSSRFH 736
           KYHSERLAIAFALINTP G+PI VMKNL AC DCHAAIK+ISKI  R+I +   D   F 
Sbjct: 421 KYHSERLAIAFALINTPPGTPITVMKNLSACLDCHAAIKMISKIVNRDIILGASDFGSFP 480

Query: 737 H 737
           H
Sbjct: 481 H 481



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 157/316 (49%), Gaps = 8/316 (2%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A++LF EMQ L F      FA+ LS    L DI +GRQ+HA ++        F+ NAL+D
Sbjct: 2   ALQLFREMQTLSFDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALID 61

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   +  A+ +F    +   +S+  +IT    N Q++E+L+LF  ++       +  
Sbjct: 62  MYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRAT 121

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            S+++   ++   + IGRQ+H     +  +S V   ++L+DMYAKCG  +EA   F  + 
Sbjct: 122 CSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEMP 181

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             +++ W A+ISAY Q G  + A+ +F  M       D  TF S+L A +      L ++
Sbjct: 182 EKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNG---LAEE 238

Query: 398 LHSFVIRSGFMSNVFSG----SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
              +     + +++       S ++D   ++G      +   EMP E + V W++++ +C
Sbjct: 239 CMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKIQKVLDEMPFEADPVIWSSILHSC 298

Query: 453 AQNGDAQATLKSFEDM 468
              G+      + E++
Sbjct: 299 RIYGNQDLATVAAENL 314



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 211/454 (46%), Gaps = 69/454 (15%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
           A +LF +M+T    D   + FA+LLS            Q+HA +I  G      + N+L+
Sbjct: 2   ALQLFREMQTLS-FDRHTLPFASLLSVAGALPDIKIGRQIHAQLILLGLTLEDFMGNALI 60

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
           D Y K   LD A+ +F     K ++S+ ALITG  + G +EEA++LF  M+  G  P   
Sbjct: 61  DMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLSPDRA 120

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T ++ + +   L  I +GRQ+HA++  +  + +VF  +ALLD+Y+K  C+ EA + F EM
Sbjct: 121 TCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIRTFNEM 180

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           PE + +++N +I+ YA   Q K ++++F  +    F      F ++L+  ++        
Sbjct: 181 PEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSH-------- 232

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW----TAMISAY 351
                             N L +   +C ++ +    + ++S     PW    + +I A 
Sbjct: 233 ------------------NGLAE---ECMKYFDLMRYYNSMS-----PWKEHYSCVIDAL 266

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRA-----SAELASLSLGKQLHSFVIRSG 406
            + G  ++   +  EM      AD   ++SIL +     + +LA+++  + L + V    
Sbjct: 267 GRAGCFDKIQKVLDEM---PFEADPVIWSSILHSCRIYGNQDLATVA-AENLFTMVPTDA 322

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV-----SWNAL---ISACAQNGDA 458
               + S     ++YAK+G+ + A +  K M +R +      SW  +   I   + N   
Sbjct: 323 TAYVILS-----NIYAKAGNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHT 377

Query: 459 QATL--------KSFEDMVQSGYQPDSVSLLSVL 484
              +        + +E+M + GY+PD+   L ++
Sbjct: 378 NPMIDEIKEELERLYEEMDKQGYEPDTSCALHMV 411



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 10/252 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  A+ +F +  D+TA+SWT LI G  Q  Q  EA +LF +MR  G S
Sbjct: 57  NALIDMYSKCGMLDAAKTIFANKSDKTAISWTALITGCVQNGQHEEALQLFCNMRRAGLS 116

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T ++++   S         Q+HA +   G+ S +   ++L+D Y K  CLD A R
Sbjct: 117 -PDRATCSSIIKSSSSLGVIGIGRQLHAYLTTSGHMSSVFSGSALLDMYAKCGCLDEAIR 175

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV--GL 187
            F EMP+K+S+++NA+I+ +A+ G  + AI++F  M H GF P   TF + L+A    GL
Sbjct: 176 TFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGFCPDPVTFLSVLAACSHNGL 235

Query: 188 ADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSY- 243
           A+  +     +  +   + + E+    + ++D   +  C  + +K+  EMP E D V + 
Sbjct: 236 AEECMKYFDLMRYYNSMSPWKEHY---SCVIDALGRAGCFDKIQKVLDEMPFEADPVIWS 292

Query: 244 NVMITCYAWNEQ 255
           +++ +C  +  Q
Sbjct: 293 SILHSCRIYGNQ 304



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 7/143 (4%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S + L+  Y K G L  A   FN M ++ +++W  +I  Y+Q  Q + A ++F D     
Sbjct: 156 SGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMF-DSMLHC 214

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII---CNSLVDSYCKIRCL 124
           G  PD VTF ++L+ CS    A E ++ + D++++ YNS+       + ++D+  +  C 
Sbjct: 215 GFCPDPVTFLSVLAACSHNGLAEECMK-YFDLMRY-YNSMSPWKEHYSCVIDALGRAGCF 272

Query: 125 DLARRVFKEMP-QKDSVSFNALI 146
           D  ++V  EMP + D V +++++
Sbjct: 273 DKIQKVLDEMPFEADPVIWSSIL 295


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/746 (37%), Positives = 443/746 (59%), Gaps = 14/746 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y + G L+ AR++F+ M  R  VSW  LI GYS    + EA +++ ++R +   
Sbjct: 145 NALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELR-NSWI 203

Query: 70  DPDYVTFATLLSGCSEPDTANELI-----QVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            PD  T +++L     P  AN L+      +H   +K G NS+ ++ N L+  Y K    
Sbjct: 204 VPDSFTVSSVL-----PAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRP 258

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             ARRVF EM  +DSV++N +I G+ K  + EE++K+F+E     FKP   T  + L A 
Sbjct: 259 TDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QFKPDILTVTSVLCAC 317

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D++L + ++ ++++  FV    V N L+D+Y+K   ++ AR +F  M   D VS+N
Sbjct: 318 GHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ Y  +    E++KLF+ +           +  L+S+     DL+ G+ +H+  I +
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKS 437

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               ++ V+N+L+DMYAKCG   ++ +IF ++  + TV W  +ISA V+ G+    L + 
Sbjct: 438 GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVT 497

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M +  +  D ATF   L   A LA+  LGK++H  ++R G+ S +  G+AL++MY+K 
Sbjct: 498 TQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L+ + + F+ M  R++V+W  +I A    G+ +  L+SF DM +SG  PDSV  ++++
Sbjct: 558 GCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALI 617

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            ACSH GL+E+GL  F  M   YK+ P  EHYA +VD+L RS    +AE+ +  MP EPD
Sbjct: 618 YACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPD 677

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W+SV+ +CR   ++E A++ + ++ ++    D    +  SN YA   +W+ VS ++K
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWDKVSLIRK 736

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT-S 663
           ++R++ ++K   YSW+E+  KVHVF + D+  PQ+  I + +E L   M KEGY PD+  
Sbjct: 737 SVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSRE 796

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            + + E+EE K   +  HSERLAIAF L+NT  G+P+ VMKNLR C+DCH   KLISKI 
Sbjct: 797 VSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIV 856

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GREI VRD++RFH FKDG CSC+D W
Sbjct: 857 GREILVRDANRFHLFKDGICSCKDRW 882



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 263/512 (51%), Gaps = 4/512 (0%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           V+ A +    S     NEL ++HA +I  G +        L+D Y   R    +  VF+ 
Sbjct: 5   VSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRR 64

Query: 134 M-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           + P K+   +N++I  F+K G   +A++ + +++     P  +TF + + A  GL D  +
Sbjct: 65  VSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G  V+  +++  F  +++V NAL+D+YS+   +  AR++F EMP  D VS+N +I+ Y+ 
Sbjct: 125 GDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSS 184

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           +  Y+E+L+++ EL+ +      F  S++L   AN L ++ G+ +H  T+ +   S   V
Sbjct: 185 HGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVV 244

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N L+ MY K  R  +A+ +F  +    +V +  MI  Y++   +EE++ +F+E      
Sbjct: 245 NNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-QF 303

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T  S+L A   L  LSL K ++++++R+GF+      + L+D+YAK G +  A  
Sbjct: 304 KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARD 363

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  M  ++ VSWN++IS   Q+GD    +K F+ M+    Q D ++ L ++S  +    
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLAD 423

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++ G +  +S   K  +        +++D+  + G   ++ K+   M    D + W++VI
Sbjct: 424 LKFG-KGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVI 481

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           ++C    +     +   Q+ K + + D A ++
Sbjct: 482 SACVRFGDFATGLQVTTQMRKNKVVPDMATFL 513



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 233/470 (49%), Gaps = 26/470 (5%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N  +V  N L++ Y+K      AR +F+ MV R +V++  +I GY +     E+ K+F++
Sbjct: 239 NSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE 298

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                   PD +T  ++L  C      +    ++  +++ G+     + N L+D Y K  
Sbjct: 299 NLDQ--FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCG 356

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR VF  M  KD+VS+N++I+G+ + G   EA+KLF  M  +  +    T+   +S
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               LAD+  G+ +H+  +K+    ++ V+NAL+D+Y+K   V ++ K+F  M  +D V+
Sbjct: 417 LSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT 476

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I+       +   L++  +++  +       F   L + A+    ++G++IH   +
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                SE+++ N+L++MY+KCG  E +  +F  +S    V WT MI AY   G  E+AL 
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF-----MSNVFSGSAL 417
            F++M ++ I  D   F +++ A +           HS ++  G      M   +    +
Sbjct: 597 SFVDMEKSGIVPDSVVFIALIYACS-----------HSGLVEKGLACFEKMKTHYKIDPM 645

Query: 418 LDMYA-------KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++ YA       +S  +  A +  + MP E +   W +++ AC  +GD +
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDME 695


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 270/749 (36%), Positives = 432/749 (57%), Gaps = 5/749 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N ++   + L   Y+    +  AR LF+ + + + + W  +I  Y+    F  A  L+  
Sbjct: 40  NADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHS 99

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P+  T+  +L  CS      + +++H+    FG  S + +C +LVD Y K  
Sbjct: 100 M-LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A+R+F  M  +D V++NA+I G +  GL ++A++L ++MQ  G  P+  T    L 
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218

Query: 183 AGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             VG A  +  G+ +H + V+ +F   V V   LLD+Y+K  C++ ARK+F  M   + V
Sbjct: 219 T-VGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           S++ MI  Y  ++  KE+L+LF ++      D +     ++L   A   DL  GR++H  
Sbjct: 278 SWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I    + ++ + N+L+ MYAKCG  ++A   F  ++   +V ++A++S  VQ GN   A
Sbjct: 338 IIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVA 397

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L++F  M  + I  D  T   +L A + LA+L  G   H ++I  GF ++    +AL+DM
Sbjct: 398 LSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 457

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K G +  A + F  M   +IVSWNA+I     +G     L  F D++  G +PD ++ 
Sbjct: 458 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 517

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + +LS+CSH GL+ EG  +F++M++ + + P+ EH   MVDIL R+G  DEA   +  MP
Sbjct: 518 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMP 577

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPD  +WS+++++CRIHKN+E  ++ + ++  +        +V +SNIY+ AG+W+  +
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP-ESTGNFVLLSNIYSAAGRWDDAA 636

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
            ++   ++ G++K+   SW+E+   VH F   D+ H Q ++I RK+E L+ EMK+ GY+ 
Sbjct: 637 HIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQA 696

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           + S    D +EE K + L YHSE+LAIAF ++N   G PILV KNLR C DCHAAIK ++
Sbjct: 697 ECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMT 756

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IT REITVRD++RFHHFK+G C+C DFW
Sbjct: 757 VITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 220/424 (51%), Gaps = 1/424 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            +  LL  C +  +  E  ++H   +K   N+   + + L   Y     + LARR+F E+
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P    + +N +I  +A  G  + AI L+  M HLG +P+ +T+   L A  GL  I  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H+         +VFV  AL+D Y+K   +VEA++LF  M   D V++N MI   +   
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              ++++L  ++Q      +      +L  V     L  G+ +H   +  +  + V V  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANIS 373
            L+DMYAKC     A++IF  +   + V W+AMI  YV    ++EAL LF +M  +  + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
               T  S+LRA A+L  LS G++LH ++I+ G + ++  G+ LL MYAK G + DAI+ 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M  ++ VS++A++S C QNG+A   L  F  M  SG  PD  ++L VL ACSH   +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 494 EEGL 497
           + G 
Sbjct: 430 QHGF 433



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 25/399 (6%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +++H   +K     +  V + L  LY   + VV AR+LF E+P    + +N +I  YAWN
Sbjct: 28  KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             +  ++ L+  +       +++ +  +L   +  L ++ G +IH+   +    S+V V 
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +LVD YAKCG   EA+ +F+++SH   V W AMI+     G  ++A+ L ++M    I 
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            + +T   +L    E  +L  GK LH + +R  F + V  G+ LLDMYAK   L  A + 
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGL 492
           F  M  RN VSW+A+I     +   +  L+ F+ M+ +    P  V+L SVL AC+    
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK--- 324

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDIL---------CRSGCFDEAEKLMAQMPFEP 543
                     +++  KL         ++DIL          + G  D+A +    M    
Sbjct: 325 -------LTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN-PK 376

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           D + +S++++ C  + N       A  +F+M +L    P
Sbjct: 377 DSVSFSAIVSGCVQNGN----AAVALSIFRMMQLSGIDP 411



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 151/328 (46%), Gaps = 12/328 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL        L   ++IH   +  T+ ++  V + L  +Y  C +   A+ +F  + + S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            + W  +I AY   G  + A++L+  M    +  ++ T+  +L+A + L ++  G ++HS
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                G  S+VF  +AL+D YAK G L +A + F  M  R++V+WNA+I+ C+  G    
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--- 517
            ++    M + G  P+S +++ VL        +  G          Y +R   ++     
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG-----KALHGYCVRRSFDNGVVVG 248

Query: 518 -SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             ++D+  +  C   A K+   M    +E+ WS++I        ++ A +  DQ+  ++ 
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVXSDCMKEALELFDQMI-LKD 306

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             D  P V + ++     +   +S+ +K
Sbjct: 307 AMDPTP-VTLGSVLRACAKLTDLSRGRK 333


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/739 (36%), Positives = 442/739 (59%), Gaps = 9/739 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G++A A  +F+++    +VSWT+++  +++   +REA   +  M  +G   PD   
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGAM 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLARRVFKEM 134
           F   +  CS      +   +HA I++       +I+  +L+  Y + R L+LAR+ F EM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEM---QHLGFKPSDFTFAAALSAGVGLADIA 191
            +K  V++NALI G+++ G +  A+K++ +M      G KP   TF++AL A   + DI+
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR++ A  V + +  +  V NAL+++YSK   +  ARK+F  +   D +++N MI+ YA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                 ++L+LF+ +       +   F  LL+   N  DL+ GR IH +       S++ 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 312 VANSLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           + N L++MY KC    EEA+++F  L     + W  +I AYVQ G  ++AL++F +M   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N++ ++ T +++L A A L +   GK +H+ +      ++V   ++L++MY + GSL D 
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           +  F  + ++++VSW+ LI+A AQ+G ++  L+ F +++Q G   D V+++S LSACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G+++EG+Q F SM   + L P   H+  MVD+L R+G  + AE L+  MPF PD + W+S
Sbjct: 481 GMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           +++ C++H + + A + AD+LF++E   + +    +SN+YA AG+W+    V+K    R 
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DVRKTRNRRA 597

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            RK    S++E+   VH F A D+ HP+   I  +I+ L ++MK  GY PD    LH+  
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K + L YHSE+LAIA+ LI+TP G+P+ ++KNLRAC DCHAA K IS+I GR+I VR
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           DS+RFHHF++G CSC+D+W
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 254/480 (52%), Gaps = 11/480 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM--RTDGGS 69
           LI+ Y +  +L  AR+ F+ M  +T V+W  LI GYS+    R A K++ DM  ++  G 
Sbjct: 100 LITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TF++ L  CS     ++  ++ A  +  GY S  I+ N+L++ Y K   L+ AR+
Sbjct: 160 KPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARK 219

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  +D +++N +I+G+AK+G   +A++LF  M     KP+  TF   L+A   L D
Sbjct: 220 VFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +  GR +H  V +  +  ++ + N LL++Y+K    + EAR++F  +   D +++N++I 
Sbjct: 280 LEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIV 339

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y    Q K++L +F+++Q      ++   S +LS  A     + G+ +H         +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V + NSL++MY +CG  ++   +FA +   S V W+ +I+AY Q G+    L  F E+ 
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459

Query: 369 RANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           +  ++AD  T  S L A +    L  G Q   S V   G   +      ++D+ +++G L
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGD----AQATLKSFEDMVQSGYQPDSVSLLS 482
           + A     +MP   + V+W +L+S C  + D    A+   K FE  ++S  +  +V+LLS
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE--LESEDEHSTVTLLS 577



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 198/386 (51%), Gaps = 28/386 (7%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   V +A  +F  +   + VS+ +++  +A N  Y+E+L  +R +           
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F   + V ++  DL+ G+ +H   + T  +  ++ +  +L+ MYA+C   E A++ F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN---ISADQATFASILRASAELASLS 393
              + V W A+I+ Y + G+   AL ++ +M   +   +  D  TF+S L A + +  +S
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+++ +  + SG+ S+    +AL++MY+K GSL+ A + F  +  R++++WN +IS  A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           + G A   L+ F+ M  +  +P+ V+ + +L+AC++   +E+G             R  K
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH---------RKVK 291

Query: 514 EH-YAS-------MVDILCR-SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
           EH Y S       ++++  + S   +EA ++  ++    D I W+ +I +   +     A
Sbjct: 292 EHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVA---YVQYGQA 347

Query: 565 KKAADQLFKMEKLRDAAPY-VAMSNI 589
           K A D +FK  +L + AP  + +SN+
Sbjct: 348 KDALD-IFKQMQLENVAPNEITLSNV 372



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +++  N LI+ Y K G+L +AR++F+ + +R  ++W  +I GY+++    +A +LF  M 
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRM- 255

Query: 65  TDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI- 121
             G +D  P+ VTF  LL+ C+  +   +   +H  + + GY S L+I N L++ Y K  
Sbjct: 256 --GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCS 313

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ AR+VF+ +  +D +++N LI  + + G  ++A+ +F +MQ     P++ T +  L
Sbjct: 314 SSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVL 373

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   L     G+ VHA +       +V + N+L+++Y++   + +   +F  + +   V
Sbjct: 374 SACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLV 433

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S++ +I  YA +   +  L+ F EL             + LS  ++   L+ G Q     
Sbjct: 434 SWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSM 493

Query: 302 IVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISA 350
           +    ++ + +    +VD+ ++ GR E A+ +  ++  +   V WT+++S 
Sbjct: 494 VGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/742 (37%), Positives = 422/742 (56%), Gaps = 3/742 (0%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            +N LI  Y K G++  AR +F+ MVD+  VSW  ++ GY+    F E  +LF  M+  G 
Sbjct: 266  SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL-GN 324

Query: 69   SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
               + V+  +     +E     +  ++H   ++   +S +++   L+  Y K    + A+
Sbjct: 325  VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            ++F  +  +D V+++A+I    + G  EEA+ LF EMQ+   KP+  T  + L A   L+
Sbjct: 385  QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             + LG+ +H F VK +   ++    AL+ +Y+K      A   F  M   D V++N +I 
Sbjct: 445  LLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             YA       ++ +F +L+ +  +        ++   A   DL  G  IH   +     S
Sbjct: 505  GYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFES 564

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N+L+DMYAKCG    A+ +F         V W  +I+AY+Q G+ +EA++ F +M
Sbjct: 565  DCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM 624

Query: 368  CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               N   +  TF S+L A+A LA+   G   H+ +I+ GF+SN   G++L+DMYAK G L
Sbjct: 625  RLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQL 684

Query: 428  KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
              + + F EM  ++ VSWNA++S  A +G     +  F  M +S  Q DSVS +SVLSAC
Sbjct: 685  DYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSAC 744

Query: 488  SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
             H GL+EEG + F+SM+ KY ++P  EHYA MVD+L R+G FDE    +  MP EPD  +
Sbjct: 745  RHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGV 804

Query: 548  WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            W +++ SCR+H N++  + A D L K+E  R+ A +V +S+IYA +G+W    + +  M 
Sbjct: 805  WGALLGSCRMHSNVKLGEVALDHLVKLEP-RNPAHFVVLSSIYAQSGRWADAGKARSKMN 863

Query: 608  ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            + G++K    SWVELK+KVH F   D+ HPQ   +      L+++M+K GY PD SC L 
Sbjct: 864  DLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQ 923

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            + +EE K   L  HSERLAI FAL+NTP GS I ++KNLR C DCH   K ISKIT R I
Sbjct: 924  NVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRI 983

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
             VRD++RFHHF+DG CSC D+W
Sbjct: 984  IVRDATRFHHFEDGICSCNDYW 1005



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 289/545 (53%), Gaps = 4/545 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   LI+ Y        AR +F+S  + + + W  +I  Y++  Q+ EA +++  M  + 
Sbjct: 65  SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM-VEK 123

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +PD  TF  +L  C+      E +  H +I + G    + I   LVD Y K+  L  A
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF +MP++D V++NA+I G ++     EA+  F  MQ +G +PS  +          L
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           ++I L R +H +V + +F   V  +N L+DLYSK   V  AR++F +M + D VS+  M+
Sbjct: 244 SNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA N  + E L+LF +++      ++    +     A  +DL+ G++IH   +     
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++ VA  L+ MYAKCG  E+AK++F  L     V W+A+I+A VQ G  EEAL+LF EM
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  ++ T  SIL A A+L+ L LGK +H F +++   S++ +G+AL+ MYAK G  
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFF 481

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A+ TF  M  R+IV+WN+LI+  AQ GD    +  F  +  S   PD+ +++ V+ AC
Sbjct: 482 TAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    +++G    + +  K           +++D+  + G    AE L  +  F  DE+ 
Sbjct: 542 ALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 548 WSSVI 552
           W+ +I
Sbjct: 601 WNVII 605



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 237/483 (49%), Gaps = 8/483 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +Y+ +  LLS C      N L+Q+HA II  G+     I + L++ Y      DLAR VF
Sbjct: 31  NYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 86

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
              P    + +N++I  + +     EA++++  M   G +P  +TF   L A  G  ++ 
Sbjct: 87  DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G   H  + +     +VF+   L+D+YSK   +  AR++F +MP+ D V++N MI   +
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +E   E++  FR +Q    + S      L   +    ++++ R IH         S   
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--A 264

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N L+D+Y+KCG  + A+ +F  +     V W  M++ Y   G   E L LF +M   N
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 324

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ +  S   A+AE   L  GK++H   ++    S++   + L+ MYAK G  + A 
Sbjct: 325 VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F  +  R++V+W+A+I+A  Q G  +  L  F++M     +P+ V+L+S+L AC+   
Sbjct: 385 QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++ G +  +  T K  +        ++V +  + G F  A     +M    D + W+S+
Sbjct: 445 LLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSL 502

Query: 552 INS 554
           IN 
Sbjct: 503 ING 505



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 8/187 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT+  N LI  Y K G L  + +LFN M  +  VSW  ++ GY+       A  LF  M+
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRC 123
            +     D V+F ++LS C       E  ++ H+   K+     L     +VD   +   
Sbjct: 727 -ESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL 785

Query: 124 LDLARRVFKEMP-QKDSVSFNALITG---FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            D      K MP + D+  + AL+      +   L E A+   V+++     P+ F   +
Sbjct: 786 FDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR--NPAHFVVLS 843

Query: 180 ALSAGVG 186
           ++ A  G
Sbjct: 844 SIYAQSG 850


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/739 (36%), Positives = 442/739 (59%), Gaps = 9/739 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G++A A  +F+++    +VSWT+++  +++   +REA   +  M  +G   PD   
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGAM 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLARRVFKEM 134
           F   +  CS      +   +HA I++       +I+  +L+  Y + R L+LAR+ F EM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEM---QHLGFKPSDFTFAAALSAGVGLADIA 191
            +K  V++NALI G+++ G +  A+K++ +M      G KP   TF++AL A   + DI+
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR++ A  V + +  +  V NAL+++YSK   +  ARK+F  +   D +++N MI+ YA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                 ++L+LF+ +       +   F  LL+   N  DL+ GR IH +       S++ 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 312 VANSLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           + N L++MY KC    EEA+++F  +     + W  +I AYVQ G  ++AL++F +M   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N++ ++ T +++L A A L +   GK +H+ +      ++V   ++L++MY + GSL D 
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           +  F  + ++++VSW+ LI+A AQ+G ++  L+ F +++Q G   D V+++S LSACSH 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G+++EG+Q F SM   + L P   H+  MVD+L R+G  + AE L+  MPF PD + W+S
Sbjct: 481 GMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTS 540

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           +++ C++H + + A + AD+LF++E   + +    +SN+YA AG+W+    V+K    R 
Sbjct: 541 LLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DVRKTRNRRA 597

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            RK    S++E+   VH F A D+ HP+   I  +I+ L ++MK  GY PD    LH+  
Sbjct: 598 ARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVK 657

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K + L YHSE+LAIA+ LI+TP G+P+ ++KNLRAC DCHAA K IS+I GR+I VR
Sbjct: 658 EEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           DS+RFHHF++G CSC+D+W
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 254/480 (52%), Gaps = 11/480 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM--RTDGGS 69
           LI+ Y +  +L  AR+ F+ M  +T V+W  LI GYS+    R A K++ DM  ++  G 
Sbjct: 100 LITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TF++ L  C+     ++  ++ A  +  GY S  I+ N+L++ Y K   L+ AR+
Sbjct: 160 KPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARK 219

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  +D +++N +I+G+AK+G   +A++LF  M     KP+  TF   L+A   L D
Sbjct: 220 VFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +  GR +H  V +  +  ++ + N LL++Y+K    + EAR++F  M   D +++N++I 
Sbjct: 280 LEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIV 339

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y    Q K++L +F+++Q      ++   S +LS  A     + G+ +H         +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V + NSL++MY +CG  ++   +FA +   S V W+ +I+AY Q G+    L  F E+ 
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459

Query: 369 RANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           +  ++AD  T  S L A +    L  G Q   S V   G   +      ++D+ +++G L
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGD----AQATLKSFEDMVQSGYQPDSVSLLS 482
           + A     +MP   + V+W +L+S C  + D    A+   K FE  ++S  +  +V+LLS
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE--LESEDEHSTVTLLS 577



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 198/385 (51%), Gaps = 26/385 (6%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   V +A  +F  +   + VS+ +++  +A N  Y+E+L  +R +           
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F   + V ++  DL+ G+ +H   + T  +  ++ +  +L+ MYA+C   E A++ F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN---ISADQATFASILRASAELASLS 393
              + V W A+I+ Y + G+   AL ++ +M   +   +  D  TF+S L A   +  +S
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+++ +  + SG+ S+    +AL++MY+K GSL+ A + F  +  R++++WN +IS  A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           + G A   L+ F+ M  +  +P+ V+ + +L+AC++   +E+G        +    + ++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG--------RAIHRKVRE 292

Query: 514 EHYAS-------MVDILCR-SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           + Y S       ++++  + S   +EA ++  +M    D I W+ +I +   +     AK
Sbjct: 293 DGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVA---YVQYGQAK 348

Query: 566 KAADQLFKMEKLRDAAPY-VAMSNI 589
            A D +FK  +L + AP  + +SN+
Sbjct: 349 DALD-IFKQMQLENVAPNEITLSNV 372



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +++  N LI+ Y K G+L +AR++F+ + +R  ++W  +I GY+++    +A +LF  M 
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRM- 255

Query: 65  TDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI- 121
             G +D  P+ VTF  LL+ C+  +   +   +H  + + GY S L+I N L++ Y K  
Sbjct: 256 --GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCS 313

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ AR+VF+ M  +D +++N LI  + + G  ++A+ +F +MQ     P++ T +  L
Sbjct: 314 SSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVL 373

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   L     G+ VHA +       +V + N+L+++Y++   + +   +F  + +   V
Sbjct: 374 SACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLV 433

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S++ +I  YA +   +  L+ F EL             + LS  ++   L+ G Q     
Sbjct: 434 SWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSM 493

Query: 302 IVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISA 350
           +    ++ + +    +VD+ ++ GR E A+ +  ++  +   V WT+++S 
Sbjct: 494 VGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 270/728 (37%), Positives = 427/728 (58%), Gaps = 3/728 (0%)

Query: 23  ATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSG 82
           A A +LF    D     W   +  Y Q  +  EA   F DM        D +T+  +LS 
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSV 306

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
            +  +      Q+H  +++FG++  + + NS ++ Y K   ++ ARR+F +M + D +S+
Sbjct: 307 VASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISW 366

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-IALGRQVHAFVV 201
           N +I+G A+ GL E +++LF+++   G  P  FT  + L A   L +   +GRQVH   +
Sbjct: 367 NTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCAL 426

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           K   V + FV+ AL+D+YSK   + EA  LF      D  S+N M+  +  ++ Y+E+L+
Sbjct: 427 KAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALR 486

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           LF  +        Q  F+         + LQ G+QIH   I      ++ V + ++DMY 
Sbjct: 487 LFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYL 546

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           KCG  + A+++F  +     V WT +IS  V+ G  E+AL  + +M  A +  D+ TFA+
Sbjct: 547 KCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFAT 606

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +++A + L +L  GKQ+H+ +++     + F  ++L+DMYAK G+++DA   F+ M  R+
Sbjct: 607 LVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRS 666

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           +  WNA+I   AQ+G+A+  L  F +M   G  PD V+ + VLSACSH GL  +  + F+
Sbjct: 667 VALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFD 726

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           SM + Y + P+ EHY+ +VD L R+G   EAEK+++ MPFE    M+ +++N+CR+  + 
Sbjct: 727 SMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDK 786

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           E  ++ A++LF M+   D+A YV +SNIYA A QWE+    +  M+   V+K   +SW++
Sbjct: 787 ETGERVAEKLFTMDP-SDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           +K+KVH+F A D  H +T+ I  K+E +M+ +K+EGY PDT  AL D +EE K  +L YH
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYH 905

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           SE+LAIA+ L+ TP  + + V+KNLR C DCH AIK IS +  REI +RD++RFHHF+ G
Sbjct: 906 SEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSG 965

Query: 742 FCSCRDFW 749
            CSC D+W
Sbjct: 966 ICSCGDYW 973



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 167/574 (29%), Positives = 271/574 (47%), Gaps = 39/574 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K   +  AR LF+ M  R  V W +++  Y +     E   LF       G  P
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHR-SGLRP 221

Query: 72  DYVTFATLLSGCSEPDT-ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           D V+  T+L G  +      EL QV A      Y + L +C+                  
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRA------YATKLFVCDD----------------- 258

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
                  D   +N  ++ + + G   EA+  F +M          T+   LS    L  +
Sbjct: 259 -----DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHL 313

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG+Q+H  VV+  + + V VAN+ +++Y K   V  AR++FG+M EVD +S+N +I+  
Sbjct: 314 ELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC 373

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISE 309
           A +   + SL+LF +L  +     QF  +++L   ++ +    +GRQ+HT  +    + +
Sbjct: 374 ARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD 433

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V+ +L+D+Y+K G+ EEA+ +F N        W AM+  +    N  EAL LF  M  
Sbjct: 434 SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
               ADQ TFA+  +A+  L  L  GKQ+H+ VI+  F  ++F  S +LDMY K G +K 
Sbjct: 494 RGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKS 553

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F ++P  + V+W  +IS C +NG+ +  L ++  M  +G QPD  +  +++ ACS 
Sbjct: 554 ARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSL 613

Query: 490 CGLIEEGLQ-YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              +E+G Q + N M       P      S+VD+  + G  ++A  L  +M       +W
Sbjct: 614 LTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALW 670

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +++I     H N E     A   F   K R   P
Sbjct: 671 NAMIVGLAQHGNAE----EALNFFNEMKSRGVTP 700



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 225/453 (49%), Gaps = 4/453 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+ YVK+G++  AR +F  M +   +SW  +I G ++      + +LF+D+    G 
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDL-LRSGL 394

Query: 70  DPDYVTFATLLSGCSEPDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            PD  T  ++L  CS  + +  +  QVH   +K G      +  +L+D Y K   ++ A 
Sbjct: 395 LPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F      D  S+NA++ GF       EA++LF  M   G K    TFA A  A   L 
Sbjct: 455 LLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLV 514

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+Q+HA V+K  F  ++FV + +LD+Y K   +  ARK+F ++P  D V++  +I+
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N + +++L  + +++       ++ F+TL+   +    L+ G+QIH   +      
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V  SLVDMYAKCG  E+A  +F  ++  S   W AMI    Q GN EEALN F EM 
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694

Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              ++ D+ TF  +L A +     S   K   S     G    +   S L+D  +++G +
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++A +    MP E +   +  L++AC   GD +
Sbjct: 755 QEAEKVVSSMPFEASATMYRTLLNACRVQGDKE 787



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 267/565 (47%), Gaps = 45/565 (7%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFN--SMVDRTAVSWTILIGGYSQKNQF------R 54
           N +   TN LI+ Y K G+L +AR+LF+     DR  V++  ++  Y+   +        
Sbjct: 45  NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTH 104

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIIC 111
           EAF +F  +R        + T + L   C     P +A+E +Q +A  +K G    + + 
Sbjct: 105 EAFHIFRLLRQSVMLTTRH-TLSPLFKLCLLYGSP-SASEALQGYA--VKIGLQWDVFVA 160

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
            +LV+ Y K + +  AR +F  MP +D V +N ++  + + G  +E + LF      G +
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLR 220

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P D      +  GVG               KT F   +    A             A KL
Sbjct: 221 P-DCVSVRTILMGVG--------------KKTVFERELEQVRAY------------ATKL 253

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F    + D   +N  ++ Y    +  E++  FR++  +R       +  +LSVVA+   L
Sbjct: 254 FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHL 313

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           ++G+QIH   +       V VANS ++MY K G    A+ +F  +  +  + W  +IS  
Sbjct: 314 ELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC 373

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSN 410
            + G  E +L LFI++ R+ +  DQ T  S+LRA + L  S  +G+Q+H+  +++G + +
Sbjct: 374 ARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD 433

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            F  +AL+D+Y+K G +++A   F      ++ SWNA++     + + +  L+ F  M +
Sbjct: 434 SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G + D ++  +   A      +++G Q  +++  K +        + ++D+  + G   
Sbjct: 494 RGEKADQITFANAAKAAGCLVRLQQGKQ-IHAVVIKMRFHYDLFVISGILDMYLKCGEMK 552

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSC 555
            A K+  Q+P  PD++ W++VI+ C
Sbjct: 553 SARKVFNQIP-SPDDVAWTTVISGC 576



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 237/524 (45%), Gaps = 49/524 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ--KDSVSFNALITGFAK 151
           + HA I+  G N    + N+L+  Y K   L  AR++F   PQ  +D V++NA++  +A 
Sbjct: 34  RTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAH 93

Query: 152 EG------LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
            G         EA  +F  ++      +  T +      +     +    +  + VK   
Sbjct: 94  TGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGL 153

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +VFVA AL+++Y+K   + EAR LF  MP  D V +NVM+  Y       E L LF  
Sbjct: 154 QWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSA 213

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
              +          T+L  V  K            T+    + +V+              
Sbjct: 214 FHRSGLRPDCVSVRTILMGVGKK------------TVFERELEQVRAY------------ 249

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
              A ++F          W   +S+Y+Q G   EA++ F +M ++ +  D  T+  IL  
Sbjct: 250 ---ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSV 306

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            A L  L LGKQ+H  V+R G+   V   ++ ++MY K+GS+  A + F +M E +++SW
Sbjct: 307 VASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISW 366

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL---QYFNS 502
           N +IS CA++G  + +L+ F D+++SG  PD  ++ SVL ACS    +EE     +  ++
Sbjct: 367 NTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHT 423

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA-QMPFEPDEIMWSSVINSCRIHKNL 561
              K  +        +++D+  + G  +EAE L   Q  F  D   W+++++   +  N 
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGF--DLASWNAMMHGFTVSDNY 481

Query: 562 EFAKKAADQLFK-MEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
               + A +LF  M +  + A  +  +N    AG    + Q K+
Sbjct: 482 ----REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQ 521



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 55/392 (14%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   +  +D+ LG++ HA +V +    + +V N L+ +Y+K   +  ARKLF   P+ D 
Sbjct: 20  LRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDR 79

Query: 241 --VSYNVMITCYAWN------EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
             V+YN ++  YA        E+  E+  +FR L+ +    ++   S L      KL L 
Sbjct: 80  DLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLF-----KLCLL 134

Query: 293 IGRQIHTQTIVTTAIS-----EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            G    ++ +   A+      +V VA +LV++YAK  R  EA+ +F  +     V W  M
Sbjct: 135 YGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVM 194

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           + AYV+ G  +E L LF    R+ +  D  +  +IL        + +GK+          
Sbjct: 195 MKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGKK---------- 236

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
              VF    L  + A       A + F    + ++  WN  +S+  Q G+    +  F D
Sbjct: 237 --TVFE-RELEQVRAY------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM----VDIL 523
           M++S    DS++ + +LS  +    +E G Q   ++     +R   + + S+    +++ 
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV-----VRFGWDQFVSVANSAINMY 342

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            ++G  + A ++  QM  E D I W++VI+ C
Sbjct: 343 VKAGSVNYARRMFGQMK-EVDLISWNTVISGC 373



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 11/238 (4%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIF--A 334
           FS L   +A+  DL +G++ H   IVT+ ++  + V N+L+ MYAKCG    A+++F   
Sbjct: 17  FSILRHAIADS-DLILGKRTHA-VIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDIT 74

Query: 335 NLSHISTVPWTAMISAYVQKGNLE------EALNLFIEMCRANISADQATFASILRASAE 388
             S    V + A+++AY   G L       EA ++F  + ++ +   + T + + +    
Sbjct: 75  PQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLL 134

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             S S  + L  + ++ G   +VF   AL+++YAK   +++A   F  MP R++V WN +
Sbjct: 135 YGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVM 194

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           + A  + G     L  F    +SG +PD VS+ ++L       + E  L+   +   K
Sbjct: 195 MKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           C  + S+    + SILR +   + L LGK+ H+ ++ SG   + +  + L+ MYAK GSL
Sbjct: 5   CSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSL 64

Query: 428 KDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFE 466
             A + F   P+  R++V++NA+++A A  G+     K+ E
Sbjct: 65  FSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHE 105


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/742 (37%), Positives = 422/742 (56%), Gaps = 3/742 (0%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            +N LI  Y K G++  AR +F+ MVD+  VSW  ++ GY+    F E  +LF  M+  G 
Sbjct: 266  SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL-GN 324

Query: 69   SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
               + V+  +     +E     +  ++H   ++   +S +++   L+  Y K    + A+
Sbjct: 325  VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK 384

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            ++F  +  +D V+++A+I    + G  EEA+ LF EMQ+   KP+  T  + L A   L+
Sbjct: 385  QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             + LG+ +H F VK +   ++    AL+ +Y+K      A   F  M   D V++N +I 
Sbjct: 445  LLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLIN 504

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             YA       ++ +F +L+ +  +        ++   A   DL  G  IH   +     S
Sbjct: 505  GYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFES 564

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V N+L+DMYAKCG    A+ +F         V W  +I+AY+Q G+ +EA++ F +M
Sbjct: 565  DCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM 624

Query: 368  CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               N   +  TF S+L A+A LA+   G   H+ +I+ GF+SN   G++L+DMYAK G L
Sbjct: 625  RLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQL 684

Query: 428  KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
              + + F EM  ++ VSWNA++S  A +G     +  F  M +S  Q DSVS +SVLSAC
Sbjct: 685  XYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSAC 744

Query: 488  SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
             H GL+EEG + F+SM+ KY ++P  EHYA MVD+L R+G FDE    +  MP EPD  +
Sbjct: 745  RHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGV 804

Query: 548  WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            W +++ SCR+H N++  + A D L K+E  R+ A +V +S+IYA +G+W    + +  M 
Sbjct: 805  WGALLGSCRMHSNVKLGEVALDHLVKLEP-RNPAHFVVLSSIYAQSGRWADAGKARSKMN 863

Query: 608  ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            + G++K    SWVELK+KVH F   D+ HPQ   +      L+++M+K GY PD SC L 
Sbjct: 864  DLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQ 923

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            + +EE K   L  HSERLAI FAL+NTP GS I ++KNLR C DCH   K ISKIT R I
Sbjct: 924  NVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRI 983

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
             VRD++RFHHF+DG CSC D+W
Sbjct: 984  IVRDATRFHHFEDGICSCNDYW 1005



 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 289/545 (53%), Gaps = 4/545 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   LI+ Y        AR +F+S  + + + W  +I  Y++  Q+ EA +++  M  + 
Sbjct: 65  SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM-VEK 123

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +PD  TF  +L  C+      E +  H +I + G    + I   LVD Y K+  L  A
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF +MP++D V++NA+I G ++     EA+  F  MQ +G +PS  +          L
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           ++I L R +H +V + +F   V  +N L+DLYSK   V  AR++F +M + D VS+  M+
Sbjct: 244 SNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA N  + E L+LF +++      ++    +     A  +DL+ G++IH   +     
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++ VA  L+ MYAKCG  E+AK++F  L     V W+A+I+A VQ G  EEAL+LF EM
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  ++ T  SIL A A+L+ L LGK +H F +++   S++ +G+AL+ MYAK G  
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFF 481

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A+ TF  M  R+IV+WN+LI+  AQ GD    +  F  +  S   PD+ +++ V+ AC
Sbjct: 482 TAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC 541

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    +++G    + +  K           +++D+  + G    AE L  +  F  DE+ 
Sbjct: 542 ALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 548 WSSVI 552
           W+ +I
Sbjct: 601 WNVII 605



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 246/510 (48%), Gaps = 13/510 (2%)

Query: 50  KNQFREAFKLFVDMRTD-----GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY 104
           K+Q R +F       ++       +  +Y+ +  LLS C      N L+Q+HA II  G+
Sbjct: 4   KHQLRRSFTSIATXASEFPSLSSSTYTNYLHYPRLLSSCKH---LNPLLQIHAQIIVSGF 60

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
                I + L++ Y      DLAR VF   P    + +N++I  + +     EA++++  
Sbjct: 61  KHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYC 119

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M   G +P  +TF   L A  G  ++  G   H  + +     +VF+   L+D+YSK   
Sbjct: 120 MVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGD 179

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           +  AR++F +MP+ D V++N MI   + +E   E++  FR +Q    + S      L   
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
           +    ++++ R IH         S   V+N L+D+Y+KCG  + A+ +F  +     V W
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             M++ Y   G   E L LF +M   N+  ++ +  S   A+AE   L  GK++H   ++
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
               S++   + L+ MYAK G  + A Q F  +  R++V+W+A+I+A  Q G  +  L  
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSL 417

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F++M     +P+ V+L+S+L AC+   L++ G +  +  T K  +        ++V +  
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYA 476

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           + G F  A     +M    D + W+S+IN 
Sbjct: 477 KCGFFTAALTTFNRMS-SRDIVTWNSLING 505



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 8/187 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT+  N LI  Y K G L  + +LFN M  +  VSW  ++ GY+       A  LF  M+
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRC 123
            +     D V+F ++LS C       E  ++ H+   K+     L     +VD   +   
Sbjct: 727 -ESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGL 785

Query: 124 LDLARRVFKEMP-QKDSVSFNALITG---FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            D      K MP + D+  + AL+      +   L E A+   V+++     P+ F   +
Sbjct: 786 FDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR--NPAHFVVLS 843

Query: 180 ALSAGVG 186
           ++ A  G
Sbjct: 844 SIYAQSG 850


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 279/738 (37%), Positives = 416/738 (56%), Gaps = 2/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  A ++F  M ++  V+W +L+ GY+Q+       KLF  M  +     
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM-MELDVKC 312

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T  T+L GC+      +   +H+ IIK GY     I   LVD Y K      A  VF
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + + D V ++ALIT   ++G +EE+IKLF  M+     P+ +T  + LSA     ++ 
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ +HA V K  F  +V V+NAL+ +Y K+ CV +  KL+  M + D +S+N  ++   
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
               Y   L +F  +    F  + + F ++L   +   D+  GRQ+H   I         
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  +L+DMYAKC   E+A   F  LS      WT +I+ Y Q    E+ALN F +M +  
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T A  L   + LASL  G+QLHS V +SG +S++F GSAL+DMYAK G +++A 
Sbjct: 613 VKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAE 672

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ +  R+ ++WN +I   AQNG     L +F  M+  G  PD V+   +LSACSH G
Sbjct: 673 ALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQG 732

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG ++FNSM + + + P  +H A MVDIL R G FDE E  + +M    + ++W +V
Sbjct: 733 LVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETV 792

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + + ++H NL   +KAA++LF+++   + + Y+ +SNI+A  G+W+ V +V+  M  +GV
Sbjct: 793 LGASKMHNNLVLGEKAANKLFELQP-EEESSYILLSNIFATEGRWDDVKRVRSLMSSKGV 851

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SWVE   +VH F ++D  HPQ  EI  K++ L +E+    Y P T   LH+  E
Sbjct: 852 KKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGE 911

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K E+L++HSERLA+ FALI+T     I + KNLR C DCH  +K IS IT +EI VRD
Sbjct: 912 TEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRD 971

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC DFW
Sbjct: 972 VRRFHHFKNGACSCNDFW 989



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 271/541 (50%), Gaps = 3/541 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K    A AR +   M DR  VSWT LI G   +    ++  LF +M+ +G   P
Sbjct: 153 LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM-P 211

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T AT L  CS     +   Q+HA   K G    L + ++LVD Y K   ++LA ++F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+++ V++N L+ G+A+ G     +KLF  M  L  K ++FT    L       ++ 
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ +H+ ++K  +  N F+   L+D+YSK    ++A  +F  + + D V ++ +ITC  
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              Q +ES+KLF  ++      +Q+   +LLS   N  +LQ G+ IH         ++V 
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+LV MY K G   +  +++ ++     + W A +S     G  +  L +F  M    
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              +  TF SIL + + L  +  G+Q+H+ +I++    N F  +AL+DMYAK   L+DA 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +  R++ +W  +I+  AQ    +  L  F  M Q G +P+  +L   LS CS   
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E G Q  +SM  K          +++VD+  + GC +EAE L   +    D I W+++
Sbjct: 632 SLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTI 689

Query: 552 I 552
           I
Sbjct: 690 I 690



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 272/568 (47%), Gaps = 35/568 (6%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           ++++L  C+   +      +H  I+K   N    +  SLV+ Y K R    AR V  +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D VS+ ALI G   EG   ++I LF EMQ+ G  P++FT A  L A      + LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA   K   + ++FV +AL+DLY+K   +  A K+F  MPE + V++NV++  YA    
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
               LKLF  +       ++F  +T+L   AN  +L+ G+ IH+  I         +   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMY+KCG   +A  +F  +     V W+A+I+   Q+G  EE++ LF  M   +   +
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q T  S+L A+    +L  G+ +H+ V + GF ++V   +AL+ MY K+G + D  + ++
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            M +R+++SWNA +S     G     L  F  M++ G+ P+  + +S+L +CS    +  
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE---------------------- 533
           G Q  ++   K +L        +++D+  +    ++A+                      
Sbjct: 535 GRQ-VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 534 ------------KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
                       + M Q   +P+E   +  ++ C    +LE  ++    +FK   + D  
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRER 609
              A+ ++YA  G  E    + +A+  R
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEALIRR 681



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 222/457 (48%), Gaps = 20/457 (4%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L++ Y+K+G +    +L+ SMVDR  +SW   + G      +     +F  M  + G
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE-G 511

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF ++L  CS     +   QVHA IIK   +    +C +L+D Y K   L+ A 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F  +  +D  ++  +IT +A+    E+A+  F +MQ  G KP++FT A  LS    LA
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+Q+H+ V K+  V ++FV +AL+D+Y+K  C+ EA  LF  +   D +++N +I 
Sbjct: 632 SLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIIC 691

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N Q  ++L  FR +           F+ +LS  +++  ++ G++          IS
Sbjct: 692 GYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS 751

Query: 309 E-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALNL 363
             V     +VD+  + G+F+E ++    +    + + W  ++ A     NL   E+A N 
Sbjct: 752 PTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANK 811

Query: 364 FIEM---------CRANISADQATFASILRASAELASLSLGKQLH-SFVIRSG----FMS 409
             E+           +NI A +  +  + R  + ++S  + K+   S+V  +G    F+S
Sbjct: 812 LFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVS 871

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           + +S   + +++ K   L   + + + +P+   V  N
Sbjct: 872 HDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHN 908



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      LI  Y K   L  A   FN +  R   +WT++I  Y+Q NQ  +A   F  
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  P+  T A  LSGCS   +     Q+H+ + K G+ S + + ++LVD Y K  
Sbjct: 608 MQQE-GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C++ A  +F+ + ++D++++N +I G+A+ G   +A+  F  M   G  P   TF   LS
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 183 A 183
           A
Sbjct: 727 A 727


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 288/774 (37%), Positives = 438/774 (56%), Gaps = 81/774 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N  IS Y++ G   +A  +FN M  R+ V++  +I GY   N+F  A K+F  
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M      D D +++  +LSG                                   Y K  
Sbjct: 117 M-----PDRDLISWNVMLSG-----------------------------------YVKNG 136

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  AR +F +MP+KD VS+NA+++GFA+ G  EEA K+F +M       ++ ++   LS
Sbjct: 137 NLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLS 192

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V    I   R++  F  K ++   +   N L+  Y +   + +AR LF  MP  D +S
Sbjct: 193 AYVQNGRIEDARRL--FDSKMDW--EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKIS 248

Query: 243 YNVMITCYAWNEQYKESLKLFREL----------------------QFTRF-----DRSQ 275
           +N+MIT YA N    E+ +LF EL                      + TR      ++++
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNE 308

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             ++ +++       ++  R++  Q       S     N++V  YA+CG  ++AK +F  
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDE 364

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +     + W AMIS Y Q G  EEAL+LFI+M R     +++  A  L + AE+A+L LG
Sbjct: 365 MPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQLH  ++++GF +   +G+ALL MY K GS+++A   F+++ E++IVSWN +I+  A++
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  FE M  +  +PD V+L+ VLSACSH GL+++G++YFNSM Q Y +    +H
Sbjct: 485 GFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKH 543

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  M+D+L R+G  DEA  LM  MPF PD   W +++ + RIH + E  +KAA+++F+ME
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              ++  YV +SN+YA +G+W  V +++  MR++GV+KV  YSWVE+++K H+FT  D  
Sbjct: 604 P-DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HP+   I   +E L  E+KK+G+   T   LHD +EE K   LKYHSE+LA+AF +++ P
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G PI V+KNLR C DCH AIK ISKIT R+I VRDS+RFHHF +G CSC D+W
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 251/515 (48%), Gaps = 47/515 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ +S N+++SGYVK+GNL+ AR LFN M ++  VSW  ++ G++Q     EA K+F
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M        + +++  LLS   +    N  I+    +     +  ++  N L+  Y +
Sbjct: 177 DQMLV-----KNEISWNGLLSAYVQ----NGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD AR +F  MP +D +S+N +ITG+A+ GL  EA +LF E+         F + A 
Sbjct: 228 KKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAM 283

Query: 181 LSAGV--GLADIALGRQVHAFVVKTNFVENVFVA-------------------------- 212
           +S  V  G+ D A  R       K     N  +A                          
Sbjct: 284 VSGFVQNGMLDEAT-RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N ++  Y++   + +A+ LF EMP+ D +S+  MI+ YA + Q +E+L LF +++     
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++   +  LS  A    L++G+Q+H + +     +     N+L+ MY KCG  EEA ++
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F +++    V W  MI+ Y + G  +EAL LF E  +  I  D  T   +L A +    +
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGLV 521

Query: 393 SLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
             G +  +S     G  +N    + ++D+  ++G L +A+   K MP   +  +W AL+ 
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           A   +GD +   K+ E + +   +PD+  +  +LS
Sbjct: 582 ASRIHGDTELGEKAAEKVFE--MEPDNSGMYVLLS 614



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 48/444 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +S N++I+GY ++G L+ AR LF  +  R   +WT ++ G+ Q     EA ++F
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M      + + V++  +++G  +     +  ++   +     +S     N++V  Y +
Sbjct: 301 EEM-----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQ 351

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A+ +F EMPQ+D +S+ A+I+G+A+ G +EEA+ LF++M+  G   +    A A
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACA 411

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS+   +A + LG+Q+H  +VK  F       NALL +Y K   + EA  +F ++ E D 
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N MI  YA +   KE+L LF  ++ T           +LS  +           HT 
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACS-----------HTG 519

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +       ++  NS+   Y           I AN  H     +T MI    + G L+EA
Sbjct: 520 LVDKG----MEYFNSMYQNYG----------ITANAKH-----YTCMIDLLGRAGRLDEA 560

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL-- 418
           LNL   M       D AT+ ++L AS       LG++    V     M    SG  +L  
Sbjct: 561 LNLMKSM---PFYPDAATWGALLGASRIHGDTELGEKAAEKVFE---MEPDNSGMYVLLS 614

Query: 419 DMYAKSGSLKDAIQTFKEMPERNI 442
           ++YA SG  ++  +   +M ++ +
Sbjct: 615 NLYAASGRWREVREMRSKMRDKGV 638


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/754 (37%), Positives = 448/754 (59%), Gaps = 13/754 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++V+ N LIS Y K G    A  +F  M   R  +SW+ ++  ++  N    A   FVDM
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIR 122
             + G  P+   FA     CS  +  +    +   +IK GY  S + +   L+D + K R
Sbjct: 160 -IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR 218

Query: 123 C-LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  A +VF++MP++++V++  +IT   + G   EAI LF++M   G++P  FT +  +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-----ARKLFGEMP 236
           SA   +  + LG+Q+H+  ++     +  V   L+++Y+K  C V+     ARK+F ++ 
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAK--CSVDGSMCAARKIFDQIL 336

Query: 237 EVDGVSYNVMITCYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           + +  S+  MIT Y     Y +E+L LFR +  T    + F FS+ L   AN   L+IG 
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+ T  +     S   VANSL+ MYA+ GR ++A++ F  L   + + +  +I AY +  
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           N EEAL LF E+    + A   TFAS+L  +A + ++  G+Q+H+ VI+SG   N    +
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+ MY++ G+++ A Q F++M +RN++SW ++I+  A++G A   L+ F  M++ G +P
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ ++VLSACSH GL+ EG ++F SM  ++ + P+ EHYA +VDIL RSG   EA + 
Sbjct: 577 NEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQF 636

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MP++ D ++W + + +CR+H NLE  K AA  + + E   D A Y+ +SN+YA   +
Sbjct: 637 INSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEP-HDPAAYILLSNLYASISK 695

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ VS ++KAM+E+ + K    SWVE+++KVH F   D  HP+  EI  +++NL  ++KK
Sbjct: 696 WDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKK 755

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY P+    LHD +EE K + L  HSE++A+AF LI+T +  PI V KNLR C DCH+A
Sbjct: 756 LGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSA 815

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IK IS  TGREI VRD++RFHH KDG CSC ++W
Sbjct: 816 IKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 292/558 (52%), Gaps = 22/558 (3%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           GS PD  T++  L  C    + +    VH  + +       +  NSL+  Y K    + A
Sbjct: 61  GSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120

Query: 128 RRVFKEM-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
             +F+ M   +D +S++A+++ FA   +   A+  FV+M   G+ P+++ FAAA  A   
Sbjct: 121 TSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST 180

Query: 187 LADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVSYN 244
              +++G  +  FV+KT +++ +V V   L+D++ K    +V A K+F +MPE + V++ 
Sbjct: 181 AEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +MIT         E++ LF ++ F+ ++  +F  S ++S  AN   L +G+Q+H+Q I  
Sbjct: 241 LMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300

Query: 305 TAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL-EEA 360
               +  V   L++MYAKC   G    A++IF  +   +   WTAMI+ YVQKG   EEA
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+LF  M   ++  +  TF+S L+A A LA+L +G+Q+ +  ++ GF S     ++L+ M
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YA+SG + DA + F  + E+N++S+N +I A A+N +++  L+ F ++   G    + + 
Sbjct: 421 YARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTF 480

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            S+LS  +  G I +G Q  ++   K  L+  +    +++ +  R G  + A ++   M 
Sbjct: 481 ASLLSGAASIGTIGKGEQ-IHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM--EKLR-DAAPYVAM----SNIYAVA 593
            + + I W+S+I     H    FA +A +   KM  E +R +   Y+A+    S++  V 
Sbjct: 540 -DRNVISWTSIITGFAKHG---FATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVN 595

Query: 594 GQWESVSQVKKAMRERGV 611
             W+     K    E GV
Sbjct: 596 EGWK---HFKSMYTEHGV 610



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 198/412 (48%), Gaps = 15/412 (3%)

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G   +AI     M H G  P   T++  L   +      +G  VH  + +++   +    
Sbjct: 45  GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           N+L+ LYSK     +A  +F  M    D +S++ M++C+A N     +L  F ++    +
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC-GRFEEA 329
             +++ F+      +    + +G  I    I T  + S+V V   L+DM+ K  G    A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F  +   + V WT MI+  +Q G   EA++LF++M  +    D+ T + ++ A A +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWN 446
             L LG+QLHS  IR G   +   G  L++MYAK    GS+  A + F ++ + N+ SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 447 ALISACAQNG--DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           A+I+   Q G  D +A L  F  M+ +   P+  +  S L AC++   +  G Q F   T
Sbjct: 345 AMITGYVQKGGYDEEA-LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF---T 400

Query: 505 QKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              KL     +    S++ +  RSG  D+A K    + FE + I +++VI++
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAF-DILFEKNLISYNTVIDA 451


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/749 (35%), Positives = 432/749 (57%), Gaps = 5/749 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N ++   + L   Y+    +  AR LF+ + + + + W  +I  Y+    F  A  L+  
Sbjct: 40  NADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHS 99

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P+  T+  +L  CS      + +++H+    FG  S + +C +LVD Y K  
Sbjct: 100 M-LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A+R+F  M  +D V++NA+I G +  GL ++A++L ++MQ  G  P+  T    L 
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218

Query: 183 AGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             VG A  +  G+ +H + V+ +F   V V   LLD+Y+K  C++ ARK+F  M   + V
Sbjct: 219 T-VGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           S++ MI  Y  ++  KE+L+LF ++      D +     ++L   A   DL  GR++H  
Sbjct: 278 SWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I   ++ ++ + N+L+ MYAKCG  ++A   F  ++   +V ++A++S  VQ GN   A
Sbjct: 338 IIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVA 397

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L++F  M  + I  D  T   +L A + LA+L  G   H ++I  GF ++    +AL+DM
Sbjct: 398 LSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 457

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K G +  A + F  M   +IVSWNA+I     +G     L  F D++  G +PD ++ 
Sbjct: 458 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 517

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + +LS+CSH GL+ EG  +F++M++ + + P+ EH   MVDIL R+G  DEA   +  MP
Sbjct: 518 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMP 577

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FEPD  +WS+++++CRIHKN+E  ++ + ++  +        +V +SNIY+ AG+W+  +
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP-ESTGNFVLLSNIYSAAGRWDDAA 636

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
            ++   ++ G++K+   SW+E+   VH F   D+ H Q ++I RK+E L+ EMK+ GY+ 
Sbjct: 637 HIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQA 696

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           + S    D +EE K + L YHSE+LAIAF ++N   G PILV KNLR C DCH AIK ++
Sbjct: 697 ECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMT 756

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IT REITVRD++RFHHFK+G C+C DFW
Sbjct: 757 LITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 221/424 (52%), Gaps = 1/424 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            +  LL  C +  +  E  ++H   +K   N+   + + L   Y     + LARR+F E+
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P    + +N +I  +A  G  + AI L+  M HLG +P+ +T+   L A  GL  I  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H+         +VFV  AL+D Y+K   +VEA++LF  M   D V++N MI   +   
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              ++++L  ++Q      +      +L  V     L  G+ +H   +  +  + V V  
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANIS 373
            L+DMYAKC     A++IF  +   + V W+AMI  YV    ++EAL LF +M  +  + 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
               T  S+LRA A+L  LS G++LH ++I+ G + ++  G+ LL MYAK G + DAI+ 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F EM  ++ VS++A++S C QNG+A   L  F  M  SG  PD  ++L VL ACSH   +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 494 EEGL 497
           + G 
Sbjct: 430 QHGF 433



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 191/399 (47%), Gaps = 25/399 (6%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +++H   +K     +  V + L  LY   + VV AR+LF E+P    + +N +I  YAWN
Sbjct: 28  KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             +  ++ L+  +       +++ +  +L   +  L ++ G +IH+   +    S+V V 
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +LVD YAKCG   EA+ +F+++SH   V W AMI+     G  ++A+ L ++M    I 
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            + +T   +L    E  +L  GK LH + +R  F + V  G+ LLDMYAK   L  A + 
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGL 492
           F  M  RN VSW+A+I     +   +  L+ F+ M+ +    P  V+L SVL AC+    
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAK--- 324

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDIL---------CRSGCFDEAEKLMAQMPFEP 543
                     +++  KL        S++DIL          + G  D+A +   +M    
Sbjct: 325 -------LTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN-PK 376

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           D + +S++++ C  + N       A  +F+M +L    P
Sbjct: 377 DSVSFSAIVSGCVQNGN----AAVALSIFRMMQLSGIDP 411



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 151/328 (46%), Gaps = 12/328 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL        L   ++IH   +  T+ ++  V + L  +Y  C +   A+ +F  + + S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            + W  +I AY   G  + A++L+  M    +  ++ T+  +L+A + L ++  G ++HS
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                G  S+VF  +AL+D YAK G L +A + F  M  R++V+WNA+I+ C+  G    
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--- 517
            ++    M + G  P+S +++ VL        +  G          Y +R   ++     
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG-----KALHGYCVRRSFDNGVVVG 248

Query: 518 -SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             ++D+  +  C   A K+   M    +E+ WS++I        ++ A +  DQ+  ++ 
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVASDCMKEALELFDQMI-LKD 306

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             D  P V + ++     +   +S+ +K
Sbjct: 307 AMDPTP-VTLGSVLRACAKLTDLSRGRK 333


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/744 (35%), Positives = 431/744 (57%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI+ Y+  G+   A  +F  M+    V++  LI G++Q      A ++F +M+ 
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G   PD VT A+LL+ C+      +  Q+H+ ++K G +   I   SL+D Y K   ++
Sbjct: 239 SG-LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIE 297

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  +F    + + V +N ++  + +     ++ ++F +MQ  G  P+ FT+   L    
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCT 357

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               I LG Q+H+  +K  F  +++V+  L+D+YSK+ C+ +ARK+   + + D VS+  
Sbjct: 358 CTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTS 417

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  ++  +E+L  F+E+Q           ++  S  A    ++ G QIH +  V+ 
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             +++ + N+LV++YA+CGR EEA  +F  + H   + W  +IS + Q    E+AL +F+
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A    +  TF S + A A LA +  GKQ+H   +++G  S     +AL+ +Y K G
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCG 597

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA   F EM  RN VSWN +I++C+Q+G     L  F+ M Q G +P+ V+ + VL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+EEGL YF SM+  Y L P  +HYA +VDIL R+G  D A + + +MP   + 
Sbjct: 658 ACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANA 717

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV G+W +  QV+K 
Sbjct: 718 MIWRTLLSACKVHKNIEIGELAAKHLLELEP-HDSASYVLLSNAYAVTGKWANRDQVRKM 776

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RG+RK    SW+E+K+ VH F   D LHP +++I + +  L   + K GYK +    
Sbjct: 777 MKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNL 836

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            H++++E K  +   HSE+LA+AF L+  P   P+ V+KNLR C DCH+ +K  S++T R
Sbjct: 837 FHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRR 896

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD  RFHHF  G CSC D+W
Sbjct: 897 EIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/569 (28%), Positives = 296/569 (52%), Gaps = 4/569 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI  Y K+G +  AR++F  +  R  VSW  ++ GY+Q+   +EAF+L+  M      
Sbjct: 82  NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              YV  +++LS C++     +   +HA + K  + S   + N+L+  Y       LA R
Sbjct: 142 PTPYV-LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M   D V+FN LI+G A+ G  E A+++F EMQ  G +P   T A+ L+A   + D
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+Q+H++++K     +     +LLDLY K   +  A  +F      + V +N+M+  
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y       +S ++F ++Q T    ++F +  +L        +++G QIH+ +I     S+
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+  L+DMY+K    ++A++I   L     V WT+MI+ YVQ    EEAL  F EM  
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D    AS   A A + ++  G Q+H+ V  SG+ +++   + L+++YA+ G  ++
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+E+  ++ ++WN LIS   Q+   +  L  F  M Q+G + +  + +S +SA ++
Sbjct: 501 AFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I++G Q  +    K     + E   +++ +  + G  ++A+ + ++M    +E+ W+
Sbjct: 561 LADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWN 618

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           ++I SC  H     A    DQ+ K E L+
Sbjct: 619 TIITSCSQHGRGLEALDLFDQM-KQEGLK 646



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 247/468 (52%), Gaps = 12/468 (2%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           ++++HA  +  G  +  +I N L+D Y K   +  AR+VFKE+  +D VS+ A+++G+A+
Sbjct: 62  VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            GL +EA +L+ +M      P+ +  ++ LSA       A GR +HA V K  F    FV
Sbjct: 122 RGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NAL+ LY        A ++F +M   D V++N +I+ +A     + +L++F E+Q +  
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                  ++LL+  A+  DLQ G+Q+H+  +      +     SL+D+Y KCG  E A +
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           IF      + V W  M+ AY Q  +L ++  +F +M    I  ++ T+  ILR       
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           + LG+Q+HS  I++GF S+++    L+DMY+K   L  A +  + + +R++VSW ++I+ 
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-----YFNSMTQK 506
             Q+   +  L +F++M   G  PD++ L S  SAC+    + +GLQ     Y +     
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +      + ++V++  R G  +EA  L  ++  + DEI W+ +I+ 
Sbjct: 482 ISI------WNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG 522


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/745 (36%), Positives = 434/745 (58%), Gaps = 2/745 (0%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +T   N L+S Y   GNL +A  +F++M  R AV++  LI G SQ     +A +LF  M 
Sbjct: 282  DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 341

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             DG  +PD  T A+L+  CS   T     Q+HA   K G+ S   I  +L++ Y K   +
Sbjct: 342  LDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 400

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            + A   F E   ++ V +N ++  +        + ++F +MQ     P+ +T+ + L   
Sbjct: 401  ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 460

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            + L D+ LG Q+H+ ++KTNF  N +V + L+D+Y+K   +  A  +       D VS+ 
Sbjct: 461  IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 520

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             MI  Y       ++L  FR++        +   +  +S  A    L+ G+QIH Q  V+
Sbjct: 521  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 580

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               S++   N+LV +Y++CG+ EE+   F        + W A++S + Q GN EEAL +F
Sbjct: 581  GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 640

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            + M R  I  +  TF S ++A++E A++  GKQ+H+ + ++G+ S     +AL+ MYAK 
Sbjct: 641  VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 700

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            GS+ DA + F E+  +N VSWNA+I+A +++G     L SF+ M+ S  +P+ V+L+ VL
Sbjct: 701  GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 760

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL+++G+ YF SM  +Y L PK EHY  +VD+L R+G    A++ + +MP +PD
Sbjct: 761  SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 820

Query: 545  EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             ++W +++++C +HKN+E  + AA  L ++E   D+A YV +SN+YAV+ +W++    ++
Sbjct: 821  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQ 879

Query: 605  AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
             M+E+GV+K    SW+E+K+ +H F   D+ HP  +EI    ++L +   + GY  D   
Sbjct: 880  KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 939

Query: 665  ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
             L++   E K   +  HSE+LAI+F L++ P   PI VMKNLR C DCHA IK +SK++ 
Sbjct: 940  LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 999

Query: 725  REITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD+ RFHHF+ G CSC+D+W
Sbjct: 1000 REIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 295/570 (51%), Gaps = 6/570 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV  N LI  Y ++G +  AR +F+ +  +   SW  +I G S+     EA +LF DM 
Sbjct: 181 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G     Y  F+++LS C + ++     Q+H  ++K G++S   +CN+LV  Y  +  L
Sbjct: 241 VLGIMPTPY-AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 299

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  +F  M Q+D+V++N LI G ++ G  E+A++LF  M   G +P   T A+ + A 
Sbjct: 300 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+Q+HA+  K  F  N  +  ALL+LY+K   +  A   F E    + V +N
Sbjct: 360 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 419

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VM+  Y   +  + S ++FR++Q      +Q+ + ++L       DL++G QIH+Q I T
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 479

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                  V + L+DMYAK G+ + A +I    +    V WT MI+ Y Q    ++AL  F
Sbjct: 480 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 539

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    I +D+    + + A A L +L  G+Q+H+    SGF S++   +AL+ +Y++ 
Sbjct: 540 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 599

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++++   F++    + ++WNAL+S   Q+G+ +  L+ F  M + G   ++ +  S +
Sbjct: 600 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 659

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            A S    +++G Q  +++  K     + E   +++ +  + G   +AEK   ++    +
Sbjct: 660 KAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKN 717

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           E+ W+++IN+   H    F  +A D   +M
Sbjct: 718 EVSWNAIINAYSKHG---FGSEALDSFDQM 744



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 279/563 (49%), Gaps = 4/563 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +  L   Y+  G+L  A ++F+ M +RT  +W  +I   + +N   E F LFV 
Sbjct: 77  DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR 136

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKI 121
           M ++  + P+  TF+ +L  C     A +++ Q+HA I+  G     ++CN L+D Y + 
Sbjct: 137 MVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN 195

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +DLARRVF  +  KD  S+ A+I+G +K     EAI+LF +M  LG  P+ + F++ L
Sbjct: 196 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 255

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   +  + +G Q+H  V+K  F  + +V NAL+ LY     ++ A  +F  M + D V
Sbjct: 256 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 315

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +YN +I   +     +++++LF+ +     +      ++L+   +    L  G+Q+H  T
Sbjct: 316 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 375

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                 S  K+  +L+++YAKC   E A + F      + V W  M+ AY    +L  + 
Sbjct: 376 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 435

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +F +M    I  +Q T+ SIL+    L  L LG+Q+HS +I++ F  N +  S L+DMY
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 495

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G L  A         +++VSW  +I+   Q       L +F  M+  G + D V L 
Sbjct: 496 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 555

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           + +SAC+    ++EG Q  ++               ++V +  R G  +E+     Q   
Sbjct: 556 NAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE- 613

Query: 542 EPDEIMWSSVINSCRIHKNLEFA 564
             D I W+++++  +   N E A
Sbjct: 614 AGDNIAWNALVSGFQQSGNNEEA 636



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 241/495 (48%), Gaps = 6/495 (1%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYC 119
           +D   + G  P++ T   LL GC + + + +E  ++H+ I+K G +S   +   L D Y 
Sbjct: 32  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 91

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L  A +VF EMP++   ++N +I   A   L  E   LFV M      P++ TF+ 
Sbjct: 92  FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 151

Query: 180 ALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            L A  G   +A     Q+HA ++     ++  V N L+DLYS++  V  AR++F  +  
Sbjct: 152 VLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 210

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D  S+  MI+  + NE   E+++LF ++       + + FS++LS       L+IG Q+
Sbjct: 211 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 270

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +     S+  V N+LV +Y   G    A+ IF+N+S    V +  +I+   Q G  
Sbjct: 271 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 330

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E+A+ LF  M    +  D  T AS++ A +   +L  G+QLH++  + GF SN     AL
Sbjct: 331 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 390

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L++YAK   ++ A+  F E    N+V WN ++ A     D + + + F  M      P+ 
Sbjct: 391 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            +  S+L  C   G +E G Q  +S   K   +      + ++D+  + G  D A  ++ 
Sbjct: 451 YTYPSILKTCIRLGDLELGEQ-IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 509

Query: 538 QMPFEPDEIMWSSVI 552
           +   + D + W+++I
Sbjct: 510 RFAGK-DVVSWTTMI 523



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 34/254 (13%)

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            SL  G++LHS +++ G  SN      L D Y   G L  A + F EMPER I +WN +I
Sbjct: 59  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 118

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGL 497
              A           F  MV     P+  +   VL AC             H  ++ +GL
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178

Query: 498 Q----YFNSMTQKYK--------------LRPKKE-HYASMVDILCRSGCFDEAEKLMAQ 538
           +      N +   Y               LR K    + +M+  L ++ C  EA +L   
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238

Query: 539 M---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           M      P    +SSV+++C+  ++LE  ++    + K+    D     A+ ++Y   G 
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 298

Query: 596 WESVSQVKKAMRER 609
             S   +   M +R
Sbjct: 299 LISAEHIFSNMSQR 312


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/745 (36%), Positives = 434/745 (58%), Gaps = 2/745 (0%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +T   N L+S Y   GNL +A  +F++M  R AV++  LI G SQ     +A +LF  M 
Sbjct: 322  DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             DG  +PD  T A+L+  CS   T     Q+HA   K G+ S   I  +L++ Y K   +
Sbjct: 382  LDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            + A   F E   ++ V +N ++  +        + ++F +MQ     P+ +T+ + L   
Sbjct: 441  ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            + L D+ LG Q+H+ ++KTNF  N +V + L+D+Y+K   +  A  +       D VS+ 
Sbjct: 501  IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             MI  Y       ++L  FR++        +   +  +S  A    L+ G+QIH Q  V+
Sbjct: 561  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               S++   N+LV +Y++CG+ EE+   F        + W A++S + Q GN EEAL +F
Sbjct: 621  GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            + M R  I  +  TF S ++A++E A++  GKQ+H+ + ++G+ S     +AL+ MYAK 
Sbjct: 681  VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            GS+ DA + F E+  +N VSWNA+I+A +++G     L SF+ M+ S  +P+ V+L+ VL
Sbjct: 741  GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL+++G+ YF SM  +Y L PK EHY  +VD+L R+G    A++ + +MP +PD
Sbjct: 801  SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860

Query: 545  EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             ++W +++++C +HKN+E  + AA  L ++E   D+A YV +SN+YAV+ +W++    ++
Sbjct: 861  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQ 919

Query: 605  AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
             M+E+GV+K    SW+E+K+ +H F   D+ HP  +EI    ++L +   + GY  D   
Sbjct: 920  KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 979

Query: 665  ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
             L++   E K   +  HSE+LAI+F L++ P   PI VMKNLR C DCHA IK +SK++ 
Sbjct: 980  LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 1039

Query: 725  REITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD+ RFHHF+ G CSC+D+W
Sbjct: 1040 REIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 295/570 (51%), Gaps = 6/570 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV  N LI  Y ++G +  AR +F+ +  +   SW  +I G S+     EA +LF DM 
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G     Y  F+++LS C + ++     Q+H  ++K G++S   +CN+LV  Y  +  L
Sbjct: 281 VLGIMPTPY-AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  +F  M Q+D+V++N LI G ++ G  E+A++LF  M   G +P   T A+ + A 
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+Q+HA+  K  F  N  +  ALL+LY+K   +  A   F E    + V +N
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VM+  Y   +  + S ++FR++Q      +Q+ + ++L       DL++G QIH+Q I T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                  V + L+DMYAK G+ + A +I    +    V WT MI+ Y Q    ++AL  F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    I +D+    + + A A L +L  G+Q+H+    SGF S++   +AL+ +Y++ 
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++++   F++    + ++WNAL+S   Q+G+ +  L+ F  M + G   ++ +  S +
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            A S    +++G Q  +++  K     + E   +++ +  + G   +AEK   ++    +
Sbjct: 700 KAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKN 757

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           E+ W+++IN+   H    F  +A D   +M
Sbjct: 758 EVSWNAIINAYSKHG---FGSEALDSFDQM 784



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 255/497 (51%), Gaps = 2/497 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +  L   Y+  G+L  A ++F+ M +RT  +W  +I   + +N   E F LFV 
Sbjct: 117 DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR 176

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKI 121
           M ++  + P+  TF+ +L  C     A +++ Q+HA I+  G     ++CN L+D Y + 
Sbjct: 177 MVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN 235

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +DLARRVF  +  KD  S+ A+I+G +K     EAI+LF +M  LG  P+ + F++ L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   +  + +G Q+H  V+K  F  + +V NAL+ LY     ++ A  +F  M + D V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +YN +I   +     +++++LF+ +     +      ++L+   +    L  G+Q+H  T
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                 S  K+  +L+++YAKC   E A + F      + V W  M+ AY    +L  + 
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +F +M    I  +Q T+ SIL+    L  L LG+Q+HS +I++ F  N +  S L+DMY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G L  A         +++VSW  +I+   Q       L +F  M+  G + D V L 
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595

Query: 482 SVLSACSHCGLIEEGLQ 498
           + +SAC+    ++EG Q
Sbjct: 596 NAVSACAGLQALKEGQQ 612



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 241/495 (48%), Gaps = 6/495 (1%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYC 119
           +D   + G  P++ T   LL GC + + + +E  ++H+ I+K G +S   +   L D Y 
Sbjct: 72  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L  A +VF EMP++   ++N +I   A   L  E   LFV M      P++ TF+ 
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 180 ALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            L A  G   +A     Q+HA ++     ++  V N L+DLYS++  V  AR++F  +  
Sbjct: 192 VLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D  S+  MI+  + NE   E+++LF ++       + + FS++LS       L+IG Q+
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +     S+  V N+LV +Y   G    A+ IF+N+S    V +  +I+   Q G  
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E+A+ LF  M    +  D  T AS++ A +   +L  G+QLH++  + GF SN     AL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L++YAK   ++ A+  F E    N+V WN ++ A     D + + + F  M      P+ 
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            +  S+L  C   G +E G Q  +S   K   +      + ++D+  + G  D A  ++ 
Sbjct: 491 YTYPSILKTCIRLGDLELGEQ-IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549

Query: 538 QMPFEPDEIMWSSVI 552
           +   + D + W+++I
Sbjct: 550 RFAGK-DVVSWTTMI 563



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 34/254 (13%)

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            SL  G++LHS +++ G  SN      L D Y   G L  A + F EMPER I +WN +I
Sbjct: 99  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGL 497
              A           F  MV     P+  +   VL AC             H  ++ +GL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218

Query: 498 Q----YFNSMTQKYK--------------LRPKKE-HYASMVDILCRSGCFDEAEKLMAQ 538
           +      N +   Y               LR K    + +M+  L ++ C  EA +L   
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278

Query: 539 M---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           M      P    +SSV+++C+  ++LE  ++    + K+    D     A+ ++Y   G 
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338

Query: 596 WESVSQVKKAMRER 609
             S   +   M +R
Sbjct: 339 LISAEHIFSNMSQR 352


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/738 (36%), Positives = 429/738 (58%), Gaps = 4/738 (0%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVS-WTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
            L+  YVK G++A+AR +F++M  +  V  W +++GGY++  +F E+  LFV M  + G  
Sbjct: 356  LVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMH-ELGIA 414

Query: 71   PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
            PD    + LL   +    A + +  H  I+K G+ +   +CN+L+  Y K   +  A  V
Sbjct: 415  PDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLV 474

Query: 131  FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
            F  MP++D++S+N++I+G +  GLN EAI+LF+ M   G +    T  + L A       
Sbjct: 475  FNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYW 534

Query: 191  ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
              GR VH + VKT  +    +ANALLD+YS         ++F  M + + VS+  MIT Y
Sbjct: 535  FAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSY 594

Query: 251  AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                 + +   L +E+         F  ++ L   A    L+ G+ +H  TI       +
Sbjct: 595  MRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLL 654

Query: 311  KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             VAN+L++MY KC   EEA+ IF  +++   + W  +I  Y +     E+ +LF +M   
Sbjct: 655  PVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-L 713

Query: 371  NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
                +  T   IL A+A ++SL  G+++H++ +R GF+ + ++ +AL+DMY K G+L  A
Sbjct: 714  QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVA 773

Query: 431  IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
               F  + ++N++SW  +I+    +G  +  +  FE M  SG +PD+ S  ++L AC H 
Sbjct: 774  RVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHS 833

Query: 491  GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            GL  EG ++F +M ++YK+ PK +HY  +VD+L R+G   EA + +  MP EPD  +W S
Sbjct: 834  GLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVS 893

Query: 551  VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
            +++ CRIHKN++ A+K AD++FK+E   +   YV ++NIYA A +WE+V ++K  +  RG
Sbjct: 894  LLHGCRIHKNVKLAEKVADKVFKLEP-ENTGYYVLLANIYAEAERWEAVKKLKNKIGGRG 952

Query: 611  VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            +R+ T YSW+E++SKVHVF A++  HP  N I   ++++ + M++EG+ P    AL   D
Sbjct: 953  LRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGAD 1012

Query: 671  EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            + +  E+L  HS +LA+AF ++N PEG PI V KN + C+ CH A K ISK+  REI +R
Sbjct: 1013 DAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILR 1072

Query: 731  DSSRFHHFKDGFCSCRDF 748
            DSSRFH F+ G CSCR +
Sbjct: 1073 DSSRFHRFEGGRCSCRGY 1090



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 260/571 (45%), Gaps = 28/571 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLF 60
            + +V    L+  Y+K G+L  AR +F+ M  + A    WT L+  Y++   F+EA  LF
Sbjct: 133 GKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLF 192

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+  G S PD    + +L   S   +  E   +H  + K G      + N+L+  Y +
Sbjct: 193 RQMQCCGVS-PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSR 251

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A RVF  M  +D++S+N++I G    G +  A+ LF +M   G + S  T  + 
Sbjct: 252 CGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSV 311

Query: 181 LSAGVGLADIALGRQVHAFVVKTNF----------VENVFVANALLDLYSKHDCVVEARK 230
           L A  GL    +G+ VH + VK+            +++  + + L+ +Y K   +  AR+
Sbjct: 312 LPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARR 371

Query: 231 LFGEMPEVDGVS-YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           +F  M     V  +N+++  YA   +++ESL LF ++        +   S LL  +    
Sbjct: 372 VFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLS 431

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
             + G   H   +     ++  V N+L+  YAK     +A  +F  +    T+ W ++IS
Sbjct: 432 CARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVIS 491

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
                G   EA+ LFI M       D  T  S+L A A+      G+ +H + +++G + 
Sbjct: 492 GCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIG 551

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
                +ALLDMY+     +   Q F+ M ++N+VSW A+I++  + G         ++MV
Sbjct: 552 ETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMV 611

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL------ 523
             G +PD  ++ S L A +     +E L+   S+   Y +R   E    + + L      
Sbjct: 612 LDGIRPDVFAVTSALHAFAG----DESLKQGKSV-HGYTIRNGMEKLLPVANALMEMYVK 666

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           CR+    E  +L+       D I W+++I  
Sbjct: 667 CRN---VEEARLIFDRVTNKDVISWNTLIGG 694



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 3/229 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  YVK  N+  AR +F+ + ++  +SW  LIGGYS+ N   E+F LF DM     
Sbjct: 657 ANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-- 714

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ VT   +L   +   +     ++HA  ++ G+       N+LVD Y K   L +AR
Sbjct: 715 FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVAR 774

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  + +K+ +S+  +I G+   G  + AI LF +M+  G +P   +F+A L A     
Sbjct: 775 VLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSG 834

Query: 189 DIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
             A GR+    + K   +E        ++DL S+   + EA +    MP
Sbjct: 835 LAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMP 883



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +++ ++N L+  YVK G L  AR LF+ +  +  +SWTI+I GY      + A  LF  M
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE 91
           R   G +PD  +F+ +L  C     A E
Sbjct: 812 RGS-GIEPDAASFSAILYACCHSGLAAE 838


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 287/774 (37%), Positives = 437/774 (56%), Gaps = 81/774 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N  IS Y++ G   +A  +FN M  R+ V++  +I GY   N+F  A K+F  
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M      D D +++  +LSG                                   Y K  
Sbjct: 117 M-----PDRDLISWNVMLSG-----------------------------------YVKNG 136

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  AR +F +MP+KD VS+NA+++GFA+ G  EEA K+F +M       ++ ++   LS
Sbjct: 137 NLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLS 192

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V    I   R++  F  K ++   +   N L+  Y +   + +AR LF  MP  D +S
Sbjct: 193 AYVQNGRIEDARRL--FDSKMDW--EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKIS 248

Query: 243 YNVMITCYAWNEQYKESLKLFREL----------------------QFTRF-----DRSQ 275
           +N+MIT YA N    E+ +LF EL                      + TR      ++++
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNE 308

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             ++ +++       ++  R++  Q       S     N++V  YA+CG  ++AK +F  
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQCGNIDQAKILFDE 364

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +     + W AMIS Y Q G  EEAL+LFI+M R     +++  A  L + AE+A+L LG
Sbjct: 365 MPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELG 424

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQLH  ++++GF +   +G+ALL MY K GS+++A   F+++ E++IVSWN +I+  A++
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARH 484

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  FE M  +  +PD V+L+ VLSACSH G +++G++YFNSM Q Y +    +H
Sbjct: 485 GFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKH 543

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  M+D+L R+G  DEA  LM  MPF PD   W +++ + RIH + E  +KAA+++F+ME
Sbjct: 544 YTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              ++  YV +SN+YA +G+W  V +++  MR++GV+KV  YSWVE+++K H+FT  D  
Sbjct: 604 P-DNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HP+   I   +E L  E+KK+G+   T   LHD +EE K   LKYHSE+LA+AF +++ P
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G PI V+KNLR C DCH AIK ISKIT R+I VRDS+RFHHF +G CSC D+W
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 251/515 (48%), Gaps = 47/515 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ +S N+++SGYVK+GNL+ AR LFN M ++  VSW  ++ G++Q     EA K+F
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M        + +++  LLS   +    N  I+    +     +  ++  N L+  Y +
Sbjct: 177 DQMLV-----KNEISWNGLLSAYVQ----NGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD AR +F  MP +D +S+N +ITG+A+ GL  EA +LF E+         F + A 
Sbjct: 228 KKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAM 283

Query: 181 LSAGV--GLADIALGRQVHAFVVKTNFVENVFVA-------------------------- 212
           +S  V  G+ D A  R       K     N  +A                          
Sbjct: 284 VSGFVQNGMLDEAT-RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSW 342

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N ++  Y++   + +A+ LF EMP+ D +S+  MI+ YA + Q +E+L LF +++     
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++   +  LS  A    L++G+Q+H + +     +     N+L+ MY KCG  EEA ++
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F +++    V W  MI+ Y + G  +EAL LF E  +  I  D  T   +L A +    +
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDDVTLVGVLSACSHTGFV 521

Query: 393 SLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
             G +  +S     G  +N    + ++D+  ++G L +A+   K MP   +  +W AL+ 
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           A   +GD +   K+ E + +   +PD+  +  +LS
Sbjct: 582 ASRIHGDTELGEKAAEKVFE--MEPDNSGMYVLLS 614



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 48/444 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +S N++I+GY ++G L+ AR LF  +  R   +WT ++ G+ Q     EA ++F
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF 300

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M      + + V++  +++G  +     +  ++   +     +S     N++V  Y +
Sbjct: 301 EEM-----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS----WNTMVTGYAQ 351

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A+ +F EMPQ+D +S+ A+I+G+A+ G +EEA+ LF++M+  G   +    A A
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACA 411

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS+   +A + LG+Q+H  +VK  F       NALL +Y K   + EA  +F ++ E D 
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N MI  YA +   KE+L LF  ++ T           +LS  +           HT 
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACS-----------HTG 519

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +       ++  NS+   Y           I AN  H     +T MI    + G L+EA
Sbjct: 520 FVDKG----MEYFNSMYQNYG----------ITANAKH-----YTCMIDLLGRAGRLDEA 560

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL-- 418
           LNL   M       D AT+ ++L AS       LG++    V     M    SG  +L  
Sbjct: 561 LNLMKSM---PFYPDAATWGALLGASRIHGDTELGEKAAEKVFE---MEPDNSGMYVLLS 614

Query: 419 DMYAKSGSLKDAIQTFKEMPERNI 442
           ++YA SG  ++  +   +M ++ +
Sbjct: 615 NLYAASGRWREVREMRSKMRDKGV 638


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 279/776 (35%), Positives = 424/776 (54%), Gaps = 111/776 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N+VS N +ISGY+++   + AR+LF+ M  +   SW +++ GY++  + R+A  LF
Sbjct: 59  MPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLF 118

Query: 61  VDMRTDGGSDPDYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSIL--------- 108
                D   + D V++  +LSG       D A ++           +N +L         
Sbjct: 119 -----DSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRL 173

Query: 109 ---------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
                          I CN L+  Y K   L  AR++F ++P +D +S+N +I+G+A++G
Sbjct: 174 EEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDG 233

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              +A +LF E                                       + V +VF   
Sbjct: 234 DLSQARRLFEE---------------------------------------SPVRDVFTWT 254

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           A++  Y +   + EAR++F EMP+   +SYNVMI  YA   QYK  + + REL    F+ 
Sbjct: 255 AMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYA---QYKR-MDMGREL----FEE 306

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
             FP                                +   N ++  Y + G   +A+ +F
Sbjct: 307 MPFP-------------------------------NIGSWNIMISGYCQNGDLAQARNLF 335

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +    +V W A+I+ Y Q G  EEA+N+ +EM R   S +++TF   L A A++A+L 
Sbjct: 336 DMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALE 395

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LGKQ+H  V+R+G+      G+AL+ MY K G + +A   F+ +  ++IVSWN +++  A
Sbjct: 396 LGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYA 455

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           ++G  +  L  FE M+ +G +PD ++++ VLSACSH GL + G +YF+SM + Y + P  
Sbjct: 456 RHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNS 515

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           +HYA M+D+L R+GC +EA+ L+  MPFEPD   W +++ + RIH N+E  ++AA+ +FK
Sbjct: 516 KHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFK 575

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
           ME   ++  YV +SN+YA +G+W  VS+++  MR+ GV+K   YSWVE+++K+H FT  D
Sbjct: 576 MEP-HNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGD 634

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
             HP+   I   +E L  +MK EGY   T   LHD +EE K   LKYHSE+LA+AF ++ 
Sbjct: 635 CFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILT 694

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            P G PI VMKNLR C DCH AIK ISKI GR I VRDS R+HHF +G CSCRD+W
Sbjct: 695 MPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/657 (40%), Positives = 400/657 (60%), Gaps = 2/657 (0%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA +I  GY     + N LV+ Y K   LD A ++F  MPQ++ VS+ A+I+G ++  
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNS 85

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              EAI+ F  M+  G  P+ F F++A+ A   L  I +G+Q+H   +K      +FV +
Sbjct: 86  KFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGS 145

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            L D+YSK   + +A K+F EMP  D VS+  MI  Y+   +++E+L  F+++       
Sbjct: 146 NLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTI 205

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            Q    + L         + GR +H+  +     S++ V N+L DMY+K G  E A  +F
Sbjct: 206 DQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF 265

Query: 334 ANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
              S   + V +T +I  YV+   +E+ L++F+E+ R  I  ++ TF+S+++A A  A+L
Sbjct: 266 GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAAL 325

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             G QLH+ V++  F  + F  S L+DMY K G L+ AIQ F E+ +   ++WN+L+S  
Sbjct: 326 EQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVF 385

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            Q+G  +  +K FE MV  G +P++++ +S+L+ CSH GL+EEGL YF SM + Y + P 
Sbjct: 386 GQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 445

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           +EHY+ ++D+L R+G   EA++ + +MPFEP+   W S + +CRIH + E  K AA++L 
Sbjct: 446 EEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV 505

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           K+E  +++   V +SNIYA   QWE V  V+  MR+  V+K+  YSWV++  K HVF A 
Sbjct: 506 KLEP-KNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HP+ + I  K++ L+ ++K  GY P T     D D+ +K + L  HSER+A+AFALI
Sbjct: 565 DWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALI 624

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + P G PI+V KNLR C DCH+AIK ISK+TGR+I VRD+SRFHHF DG CSC D+W
Sbjct: 625 SMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 245/483 (50%), Gaps = 6/483 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T  TN L++ Y K G L  A +LF++M  R  VSWT +I G SQ ++F EA + F  MR 
Sbjct: 40  TFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRI 99

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G  P    F++ +  C+   +     Q+H   +KFG  S L + ++L D Y K   + 
Sbjct: 100 -CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMF 158

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A +VF+EMP KD VS+ A+I G++K G  EEA+  F +M             + L A  
Sbjct: 159 DACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACG 218

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYN 244
            L     GR VH+ VVK  F  ++FV NAL D+YSK   +  A  +FG   E  + VSY 
Sbjct: 219 ALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYT 278

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  Y   EQ ++ L +F EL+    + ++F FS+L+   AN+  L+ G Q+H Q +  
Sbjct: 279 CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKI 338

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +  V++ LVDMY KCG  E+A + F  +   + + W +++S + Q G  ++A+ +F
Sbjct: 339 NFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIF 398

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
             M    +  +  TF S+L   +    +  G    +S     G +      S ++D+  +
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 458

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G LK+A +    MP E N   W + + AC  +GD +    + E +V+   +P +   L 
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK--LEPKNSGALV 516

Query: 483 VLS 485
           +LS
Sbjct: 517 LLS 519



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 199/364 (54%), Gaps = 7/364 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+Q+HA ++   +    F+ N L+++YSK   +  A KLF  MP+ + VS+  MI+  + 
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N ++ E+++ F  ++      +QF FS+ +   A+   +++G+Q+H   +     SE+ V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L DMY+KCG   +A ++F  +     V WTAMI  Y + G  EEAL  F +M    +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
           + DQ    S L A   L +   G+ +HS V++ GF S++F G+AL DMY+K+G ++ A  
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 433 TFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
            F    E RN+VS+  LI    +    +  L  F ++ + G +P+  +  S++ AC++  
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            +E+G Q      Q  K+   ++ + S  +VD+  + G  ++A +   ++  +P EI W+
Sbjct: 324 ALEQGTQLH---AQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWN 379

Query: 550 SVIN 553
           S+++
Sbjct: 380 SLVS 383



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 38/365 (10%)

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           R     + ++   A    L+ G+Q+H   I         + N LV+MY+KCG  + A ++
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   + V WTAMIS   Q     EA+  F  M        Q  F+S +RA A L S+
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            +GKQ+H   ++ G  S +F GS L DMY+K G++ DA + F+EMP ++ VSW A+I   
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQ--- 498
           ++ G+ +  L +F+ M+      D   L S L AC            H  +++ G +   
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 499 -YFNSMTQKYKLRPKKEHYASM--VDILCRS----GC----FDEAEKL---------MAQ 538
              N++T  Y      E  +++  +D  CR+     C    + E E++         + +
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA--MSNIYAVAGQW 596
              EP+E  +SS+I +C     LE   +   Q+ K+    D  P+V+  + ++Y   G  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN--FDEDPFVSSILVDMYGKCGLL 360

Query: 597 ESVSQ 601
           E   Q
Sbjct: 361 EQAIQ 365


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 295/750 (39%), Positives = 444/750 (59%), Gaps = 15/750 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + KSG+L+ AR++FN M  R AV+   L+ G  ++    EA KLF+DM +     P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308

Query: 72  DYVTFATLLSGCSEPDTANEL-----IQVHADIIKFGYNSILI-ICNSLVDSYCKIRCLD 125
           +  ++  LLS   E   A E+      +VH  +I  G    ++ I N LV+ Y K   + 
Sbjct: 309 E--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ARRVF  M  KDSVS+N++ITG  + G   EA++ +  M+     P  FT  ++LS+  
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L    LG+Q+H   +K     NV V+NAL+ LY++   + E RK+F  MPE D VS+N 
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486

Query: 246 MITCYAWNEQ-YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +I   A +E+   E++  F   Q      ++  FS++LS V++    ++G+QIH   +  
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNL 363
               E    N+L+  Y KCG  +  ++IF+ ++     V W +MIS Y+    L +AL+L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
              M +     D   +A++L A A +A+L  G ++H+  +R+   S+V  GSAL+DMY+K
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP-DSVSLLS 482
            G L  A++ F  MP RN  SWN++IS  A++G  +  LK FE M   G  P D V+ + 
Sbjct: 667 CGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG ++F SM+  Y L P+ EH++ M D+L R+G  D+ E  + +MP +
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786

Query: 543 PDEIMWSSVINSC-RIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           P+ ++W +V+ +C R + +  E  KKAA+ LF++E   +A  YV + N+YA  G+WE + 
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP-ENAVNYVLLGNMYAAGGRWEDLV 845

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           + +K M++  V+K   YSWV +K  VH+F A D+ HP  + I +K++ L ++M+  GY P
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS-PILVMKNLRACTDCHAAIKLI 719
            T  AL+D ++E K E L YHSE+LA+AF L      + PI +MKNLR C DCH+A K I
Sbjct: 906 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SKI GR+I +RDS+RFHHF+DG CSC DFW
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/577 (28%), Positives = 297/577 (51%), Gaps = 18/577 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y+++G+  +AR++F+ M  R  VSW  ++ GYS+  + +EA     DM  +G  
Sbjct: 40  NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99

Query: 70  DPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCK-IRCLDL 126
              Y  F ++L  C E  +   L   Q+H  + K  Y    ++ N L+  Y K I  +  
Sbjct: 100 SNQY-AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A   F ++  K+SVS+N++I+ +++ G    A ++F  MQ+ G +P+++TF + ++    
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218

Query: 187 LA--DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           L   D+ L  Q+   + K+  + ++FV + L+  ++K   +  ARK+F +M   + V+ N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS-----VVANKLDLQIGRQIHT 299
            ++      +  +E+ KLF ++  +  D S   +  LLS      +A ++ L+ GR++H 
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             I T  +   V + N LV+MYAKCG   +A+ +F  ++   +V W +MI+   Q G   
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EA+  +  M R +I     T  S L + A L    LG+Q+H   ++ G   NV   +AL+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA-QATLKSFEDMVQSGYQPDS 477
            +YA++G L +  + F  MPE + VSWN++I A A++  +    +  F +  ++G + + 
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++  SVLSA S     E G Q  + +  K  +  +     +++    + G  D  EK+ +
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +M    D + W+S+I S  IH   E   KA D ++ M
Sbjct: 577 RMAERRDNVTWNSMI-SGYIHN--ELLAKALDLVWFM 610



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 176/592 (29%), Positives = 301/592 (50%), Gaps = 25/592 (4%)

Query: 5   NTVSTNMLISGYVKS-GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           + V +N+LIS Y K  G++  A   F  +  + +VSW  +I  YSQ    R AF++F  M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197

Query: 64  RTDGGSDPDYVTFATLLS-GCS--EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + DG S P   TF +L++  CS  EPD    L Q+   I K G  + L + + LV ++ K
Sbjct: 198 QYDG-SRPTEYTFGSLVTTACSLTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTF-- 177
              L  AR+VF +M  +++V+ N L+ G  ++   EEA KLF++M  +    P  +    
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 178 ----AAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLF 232
                 +L+  VGL     GR+VH  V+ T  V+  V + N L+++Y+K   + +AR++F
Sbjct: 316 SSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
             M + D VS+N MIT    N  + E+++ ++ ++        F   + LS  A+    +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           +G+QIH +++       V V+N+L+ +YA+ G   E ++IF+++     V W ++I A  
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492

Query: 353 Q-KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           + + +L EA+  F+   RA    ++ TF+S+L A + L+   LGKQ+H   +++      
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            + +AL+  Y K G +    + F  M E R+ V+WN++IS    N      L     M+Q
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           +G + DS    +VLSA +    +E G++  ++ + +  L       +++VD+  + G  D
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLD 671

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            A +    MP   +   W+S+I+    H   E A K    LF+  KL    P
Sbjct: 672 YALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALK----LFETMKLDGQTP 718



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           H+ + K   +  + +CN+L+++Y +      AR+VF EMP ++ VS+  +++G+++ G +
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           +EA+    +M   G   + + F + L A   +G   I  GRQ+H  + K ++  +  V+N
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 214 ALLDLYSKH-DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
            L+ +Y K    V  A   FG++   + VS+N +I+ Y+     + + ++F  +Q+    
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 273 RSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            +++ F +L++   +  + D+++  QI      +  ++++ V + LV  +AK G    A+
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR-----A 385
           ++F  +   + V    ++   V++   EEA  LF++M  + I     ++  +L      +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYS 322

Query: 386 SAELASLSLGKQLHSFVIRSG---FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
            AE   L  G+++H  VI +G   FM  +  G+ L++MYAK GS+ DA + F  M +++ 
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGI--GNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSWN++I+   QNG     ++ ++ M +    P S +L+S LS+C+     + G Q  + 
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIHG 439

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            + K  +        +++ +   +G  +E  K+ + MP E D++ W+S+I +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 201/463 (43%), Gaps = 53/463 (11%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R  H+ + K    ++V++ N L++ Y +    V ARK+F EMP  + VS+  +++ Y+ N
Sbjct: 21  RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA--NKLDLQIGRQIHTQTIVTTAISEVK 311
            ++KE+L   R++       +Q+ F ++L        + +  GRQIH      +   +  
Sbjct: 81  GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140

Query: 312 VANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           V+N L+ MY KC G    A   F ++   ++V W ++IS Y Q G+   A  +F  M   
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200

Query: 371 NISADQATFASILRASAELA--SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                + TF S++  +  L    + L +Q+   + +SG ++++F GS L+  +AKSGSL 
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLL------ 481
            A + F +M  RN V+ N L+    +    +   K F DM       P+S  +L      
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320

Query: 482 ---------------------------------SVLSACSHCGLIEEGLQYFNSMTQKYK 508
                                             +++  + CG I +  + F  MT K  
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 509 LRPKKEHYASMVDILCRSGCFDEA---EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           +      + SM+  L ++GCF EA    K M +    P      S ++SC   K  +  +
Sbjct: 381 VS-----WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           +   +  K+    + +   A+  +YA  G      ++  +M E
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 11/269 (4%)

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           P S + S V ++      R  H++        +V + N+L++ Y + G    A+++F  +
Sbjct: 6   PLSFVQSCVGHR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL-- 394
              + V W  ++S Y + G  +EAL    +M +  I ++Q  F S+LRA  E+ S+ +  
Sbjct: 63  PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKS-GSLKDAIQTFKEMPERNIVSWNALISACA 453
           G+Q+H  + +  +  +    + L+ MY K  GS+  A+  F ++  +N VSWN++IS  +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM---TQKYKLR 510
           Q GD ++  + F  M   G +P   +  S+++  + C L E  ++    +    QK  L 
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLL 240

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                 + +V    +SG    A K+  QM
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQM 269



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 15/114 (13%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G L  A   FN+M  R + SW  +I GY++  Q  EA KLF  M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
            DG + PD+VTF  +LS CS           HA +++ G+        S+ DSY
Sbjct: 713 LDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHF----ESMSDSY 751


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 431/744 (57%), Gaps = 2/744 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI+ Y+  G+   A  +F  M+    V++  LI G++Q      A ++F +M+ 
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G   PD VT A+LL+ C+      +  Q+H+ ++K G +   I   SL+D Y K   ++
Sbjct: 239 SG-LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIE 297

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  +F    + + V +N ++  + +     ++ ++F +MQ  G  P+ FT+   L    
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCT 357

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               I LG Q+H+  +K  F  +++V+  L+D+YSK+ C+ +ARK+   + + D VS+  
Sbjct: 358 CTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTS 417

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  ++  +E+L  F+E+Q           ++  S  A    ++ G QIH +  V+ 
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             +++ + N+LV++YA+CGR EEA  +F  + H   + W  +IS + Q    ++AL +F+
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +A    +  TF S + A A LA +  GKQ+H   +++G  S     +AL+ +Y K G
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCG 597

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA   F EM  RN VSWN +I++C+Q+G     L  F+ M Q G +P+ V+ + VL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+EEGL YF SM+  Y L P  +HYA +VDIL R+G  D A + + +MP   + 
Sbjct: 658 ACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANA 717

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV G+W +  QV+K 
Sbjct: 718 MIWRTLLSACKVHKNIEIGELAAKHLLELEP-HDSASYVLLSNAYAVTGKWANRDQVRKM 776

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++RG+RK    SW+E+K+ VH F   D LHP +++I + +  L   + K GYK +    
Sbjct: 777 MKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNL 836

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            H++++E K  +   HSE+LA+AF L+  P   P+ V+KNLR C DCH+ +K  S++T R
Sbjct: 837 FHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRR 896

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD  RFHHF  G CSC D+W
Sbjct: 897 EIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 296/569 (52%), Gaps = 4/569 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI  Y K+G +  AR++F  +  R  VSW  ++ GY+Q    +EAF+L+  M      
Sbjct: 82  NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              YV  +++LS C++     +   +HA + K  + S   + N+L+  Y       LA R
Sbjct: 142 PTPYV-LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M   D V+FN LI+G A+ G  E A+++F EMQ  G +P   T A+ L+A   + D
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+Q+H++++K     +     +LLDLY K   +  A  +F      + V +N+M+  
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y       +S ++F ++Q T    +QF +  +L        +++G QIH+ +I     S+
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+  L+DMY+K G  ++A++I   L     V WT+MI+ YVQ    EEAL  F EM  
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D    AS   A A + ++  G Q+H+ V  SG+ +++   + L+++YA+ G  ++
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+E+  ++ ++WN LIS   Q+   +  L  F  M Q+G + +  + +S +SA ++
Sbjct: 501 AFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALAN 560

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I++G Q  +    K     + E   +++ +  + G  ++A+ + ++M    +E+ W+
Sbjct: 561 LADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-NEVSWN 618

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           ++I SC  H     A    DQ+ K E L+
Sbjct: 619 TIITSCSQHGRGLEALDLFDQM-KQEGLK 646



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 248/468 (52%), Gaps = 12/468 (2%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           ++++HA  +  G  +  +I N L+D Y K   +  AR+VFKE+  +D VS+ A+++G+A+
Sbjct: 62  VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            GL +EA +L+ +M      P+ +  ++ LSA       A GR +HA V K  F    FV
Sbjct: 122 SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NAL+ LY        A ++F +M   D V++N +I+ +A     + +L++F E+Q +  
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                  ++LL+  A+  DLQ G+Q+H+  +      +     SL+D+Y KCG  E A +
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           IF      + V W  M+ AY Q  +L ++  +F +M    I  +Q T+  ILR       
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQ 361

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           + LG+Q+HS  I++GF S+++    L+DMY+K G L  A +  + + +R++VSW ++I+ 
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-----YFNSMTQK 506
             Q+   +  L +F++M   G  PD++ L S  SAC+    + +GLQ     Y +     
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +      + ++V++  R G  +EA  L  ++  + DEI W+ +I+ 
Sbjct: 482 ISI------WNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISG 522


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/786 (36%), Positives = 448/786 (56%), Gaps = 40/786 (5%)

Query: 1    MPNQNTVSTNMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFK 58
            M  +N +S   LISGY K G  ++A AR +F+ M  R   SW+ ++ GY +   + EA  
Sbjct: 301  MEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVG 360

Query: 59   LFVDMRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSLVDS 117
            LF  M   G  +P+    A+L++ CS     A+E  QVH  ++K G    + +  +LV  
Sbjct: 361  LFCQMWGLG-VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHF 419

Query: 118  YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
            Y  I  +  A+++F+EMP  + VS+ +L+ G++  G   E + ++  M+  G   +  TF
Sbjct: 420  YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 479

Query: 178  AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            A   S+   L D  LG QV   +++  F ++V VAN+L+ ++S    V EA  +F  M E
Sbjct: 480  ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 539

Query: 238  VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
             D +S+N MI+ YA +   +ESL+ F  ++    + +    S+LLSV ++  +L+ GR I
Sbjct: 540  CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 599

Query: 298  HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            H   +     S V + N+L+ +Y++ GR E+A+ +F  ++    + W +M++ YVQ G  
Sbjct: 600  HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 659

Query: 358  EEALNLFIEMCR----------------------------------ANISADQATFASIL 383
             + L +  E+ +                                    I A+  T  S L
Sbjct: 660  LDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-L 718

Query: 384  RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
             A+A LA L  G+QLH  VI+ GF S++   +A +DMY K G + D ++   +   R+ +
Sbjct: 719  AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRL 778

Query: 444  SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            SWN LISA A++G  Q   ++F +M++ G +PD V+ +S+LSAC+H GL++EGL Y++SM
Sbjct: 779  SWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSM 838

Query: 504  TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            T+++ + P  EH   ++D+L RSG    AE  + +MP  P+++ W S++ +CRIH NLE 
Sbjct: 839  TREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLEL 898

Query: 564  AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            A+K A+ L +++   D+A YV  SN+ A +G+WE V  ++K M    ++K  A SWV+LK
Sbjct: 899  ARKTAEHLLELDPSDDSA-YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 957

Query: 624  SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
             KVH F   ++ HPQ + I  K+  LM+  K+ GY PDTS ALHD DEE K  +L  HSE
Sbjct: 958  DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1017

Query: 684  RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
            RLA+AF LINTPE S + + KNLR C DCH+  K +S I GR+I +RD  RFHHF  G C
Sbjct: 1018 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1077

Query: 744  SCRDFW 749
            SC D+W
Sbjct: 1078 SCGDYW 1083



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 174/694 (25%), Positives = 306/694 (44%), Gaps = 119/694 (17%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + + L+  + K G +  A  LF +M++R  VSW  +IGGY+ +    ++F +F  M   G
Sbjct: 129 ANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM-LRG 187

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS--------------------- 106
           G  PD  T  ++L   +E        Q+H  I + GY S                     
Sbjct: 188 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA 247

Query: 107 --------------------------ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
                                     I  + N+L+D Y K   ++ A+R F EM +K+ +
Sbjct: 248 KDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVI 307

Query: 141 SFNALITGFAKEG---------------------------------LNEEAIKLFVEMQH 167
           S+ +LI+G+AK G                                 L EEA+ LF +M  
Sbjct: 308 SWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 367

Query: 168 LGFKPSDFTFAAALSAGVGLADIA-LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
           LG +P+ F  A+ ++A      +A  G QVH FVVKT  + +V+V  AL+  Y     V 
Sbjct: 368 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 427

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A+KLF EMP+ + VS+  ++  Y+ +    E L +++ ++      +Q  F+T+ S   
Sbjct: 428 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 487

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
              D  +G Q+    I       V VANSL+ M++     EEA  +F +++    + W A
Sbjct: 488 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 547

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MISAY   G   E+L  F  M   +   +  T +S+L   + + +L  G+ +H  V++ G
Sbjct: 548 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 607

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
             SNV   + LL +Y+++G  +DA   F+ M ER+++SWN++++   Q+G     LK   
Sbjct: 608 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 667

Query: 467 DMVQSGYQPDSVSLLSV----------------------------------LSACSHCGL 492
           +++Q G +PD V+  ++                                  L+A ++  +
Sbjct: 668 ELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAV 726

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +EEG Q  + +  K           + +D+  + G   +  K++ Q P     + W+ +I
Sbjct: 727 LEEG-QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILI 784

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           ++   H   + A++   ++ K+    D   +V++
Sbjct: 785 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 818



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 252/553 (45%), Gaps = 74/553 (13%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  YVK G++  AR +F+ M +R+ VSWT ++ GYSQ  +F +AF LF DMR  G    
Sbjct: 71  LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG---- 126

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                                  V A+             ++LVD + K   ++ A  +F
Sbjct: 127 -----------------------VKAN-------------HALVDFHSKCGKMEDASYLF 150

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M ++D VS+NA+I G+A +G  +++  +F  M   G  P  +T  + L A      + 
Sbjct: 151 GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 210

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +  Q+H  + +  +     V   L++ Y+K+  +  A+ L   M + D  S   +IT YA
Sbjct: 211 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 270

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
               Y                      + L+ + A   +++  ++   +      IS   
Sbjct: 271 HEGIYTMG-------------------NALIDMYAKSGEIEDAKRAFDEMEEKNVIS--- 308

Query: 312 VANSLVDMYAK--CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
              SL+  YAK   G    A+ +F  + H +   W+ M+S YV+ G  EEA+ LF +M  
Sbjct: 309 -WTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 367

Query: 370 ANISADQATFASILRASAELASLS-LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +    AS++ A +    ++  G Q+H FV+++G + +V+ G+AL+  Y   G + 
Sbjct: 368 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 427

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A + F+EMP+ N+VSW +L+   + +G+    L  ++ M Q G   +  +  +V S+  
Sbjct: 428 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSS-- 485

Query: 489 HCGLIEE---GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            CGL+E+   G Q    + Q Y          S++ +       +EA  +   M  E D 
Sbjct: 486 -CGLLEDQVLGYQVLGHIIQ-YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDI 542

Query: 546 IMWSSVINSCRIH 558
           I W+++I++   H
Sbjct: 543 ISWNAMISAYAHH 555



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 195/475 (41%), Gaps = 107/475 (22%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G  +H  ++   F  ++ +   L+  Y K   V+ AR +F  MPE   VS+  M++ Y+ 
Sbjct: 49  GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N +++++  LF +++                                          VK 
Sbjct: 109 NGRFEKAFVLFSDMRHC---------------------------------------GVKA 129

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++LVD ++KCG+ E+A  +F  +     V W AMI  Y  +G  +++  +F  M R  +
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMS----------------------- 409
             D  T  S+LRASAE   L +  Q+H  + + G+ S                       
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249

Query: 410 --------NVFS----------------GSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
                   ++FS                G+AL+DMYAKSG ++DA + F EM E+N++SW
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 309

Query: 446 NALISACAQNGDAQATLKS--FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            +LIS  A++G          F++M       +  S  ++LS     GL EE +  F  M
Sbjct: 310 TSLISGYAKHGYGHMAHARYVFDEMRHR----NEASWSTMLSGYVRVGLYEEAVGLFCQM 365

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE-IMWSSVINSCRIHKNLE 562
                + P     AS++    RSG        MA   F+    ++ + ++    +   L 
Sbjct: 366 -WGLGVEPNGFMVASLITACSRSG-------YMADEGFQVHGFVVKTGILGDVYVGTALV 417

Query: 563 FAKKAADQLFKMEKLRDAAP------YVAMSNIYAVAGQWESVSQVKKAMRERGV 611
               +   ++  +KL +  P      + ++   Y+ +G    V  V + MR+ GV
Sbjct: 418 HFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 472



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 157/400 (39%), Gaps = 91/400 (22%)

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E+LKL      TR D S +    +L +  +K   + G  IHT  I     S++ +   L+
Sbjct: 16  EALKLLSS-NPTRLDPSLYL--KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
             Y K G    A+ +F  +   S V WTAM+S Y Q G  E+A  LF +M    + A+  
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH- 131

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
                                                 AL+D ++K G ++DA   F  M
Sbjct: 132 --------------------------------------ALVDFHSKCGKMEDASYLFGTM 153

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG------ 491
            ER++VSWNA+I   A  G A  +   F  M++ G  PD  +L SVL A +  G      
Sbjct: 154 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 213

Query: 492 -----LIEEGLQYF--------NSMTQKYKLRPKKE------------------HYA--- 517
                + + G   +        N+  +   LR  K+                   YA   
Sbjct: 214 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 273

Query: 518 ------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                 +++D+  +SG  ++A++   +M  E + I W+S+I+    H     A   A  +
Sbjct: 274 IYTMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHGYGHMAH--ARYV 330

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           F   + R+ A +  M + Y   G +E    +   M   GV
Sbjct: 331 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 370



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G L EAL L   +       D + +  IL+   +  +   G  +H+ +I +GF S++   
Sbjct: 12  GRLAEALKL---LSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLN 68

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           + L+  Y K G +  A   F  MPER++VSW A++S  +QNG  +     F DM   G +
Sbjct: 69  TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
            +     +++   S CG +E+    F +M ++
Sbjct: 129 ANH----ALVDFHSKCGKMEDASYLFGTMMER 156


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/672 (40%), Positives = 398/672 (59%), Gaps = 37/672 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-- 169
           N+L+ +Y K+  L   +RVF  MP  D VS+N+L++G+A  GL  E+++++  M   G  
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 170 -FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD----- 223
                 F+    LS+  G  D  LGRQ+H  + K  +   +FV + L+D+Y+K       
Sbjct: 135 NLNRITFSTMLILSSNRGFVD--LGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDA 192

Query: 224 ------------------------C--VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
                                   C  +VEA +LF  MPE D +S+  +IT    N  +K
Sbjct: 193 NRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFK 252

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E++  F+E+    F   QF F ++L+     L L  G+QIH   I T     + V ++L+
Sbjct: 253 EAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALL 312

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMY KC   + A+ +F  + H + + WTAM+  Y Q G  EEA+ +F +M R  I  D  
Sbjct: 313 DMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDF 372

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T  S++ + A LASL  G Q H   + SG +  V   +AL+ +Y K GSL+ A Q F EM
Sbjct: 373 TLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEM 432

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             R+ VSW AL+S  AQ G A  T+  FE M+  G  PD V+ + VLSACS  GL+E+G 
Sbjct: 433 KIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGY 492

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YF  M +++++ P  +HY  M+D+L R+G  +EA+  + QMPF PD I W+++++SCR+
Sbjct: 493 HYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRL 552

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           + NLE  K AA+ L K+E  ++ A Y+ +S+IYA  G+W+ V++++K MRE GV+K   +
Sbjct: 553 NGNLEIGKWAAESLHKLEP-QNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGH 611

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW++ K+KVH+F+A+D   P +++I  K+E+L  +M +EGY PD S  LHD ++  K++ 
Sbjct: 612 SWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKM 671

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           L +HSE+LAIAF L+  P+G  I V+KNLR C DCH A K IS+IT REI VRD+ RFH 
Sbjct: 672 LNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHL 731

Query: 738 FKDGFCSCRDFW 749
           FKDG CSC DFW
Sbjct: 732 FKDGVCSCGDFW 743



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 261/520 (50%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  N  S N L+S Y K G L   + +F+SM +   VSW  L+ GY+      E+ +++
Sbjct: 66  IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY 125

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG  + + +TF+T+L   S     +   Q+H  I KFGY S L + + LVD Y K
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAK 185

Query: 121 IRCLDLARRVFKE-------------------------------MPQKDSVSFNALITGF 149
              ++ A R+F+E                               MP+KDS+S+  +ITG 
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGL 245

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL +EA+  F EM   GF    FTF + L+A  G   +  G+Q+HA++++T++ +N+
Sbjct: 246 TQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI 305

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +ALLD+Y K   V  A  +F +M   + +S+  M+  Y  N   +E++++F ++Q  
Sbjct: 306 FVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F   +++S  AN   L+ G Q H Q + +  I  V V+N+L+ +Y KCG  E A
Sbjct: 366 EIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHA 425

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F  +     V WTA++S Y Q G   E ++LF  M    I  D  TF  +L A +  
Sbjct: 426 HQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRA 485

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G      +++   ++ +    + ++D+ +++G L++A     +MP   + + W  
Sbjct: 486 GLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWAT 545

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C  NG+ +    + E + +   Q P S  LLS + A
Sbjct: 546 LLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYA 585



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 4/168 (2%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +S+    + + L+   E  + +  K+LH  +IR+      F  + L++ Y K G LK+A 
Sbjct: 1   MSSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNAR 60

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +P+ N+ SWN L+SA ++ G  Q   + F+ M       D VS  S+LS  +  G
Sbjct: 61  NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNH----DVVSWNSLLSGYAGNG 116

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
           LI E ++ +N M +   +   +  +++M+ +    G  D   ++  Q+
Sbjct: 117 LISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI 164


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/774 (36%), Positives = 433/774 (55%), Gaps = 80/774 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N+ I+ ++++G   +A  LFNSM  R+++SW  +I G    ++F  A +LF  
Sbjct: 46  DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M T      D V++  ++SGC                                    + R
Sbjct: 106 MPTR-----DLVSWNVMISGC-----------------------------------VRYR 125

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  AR +F +MP++D VS+NA+++G+A+ G  +EA ++F EM       +  ++   L+
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLA 181

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V    I   R++  F  K ++   +   N ++  Y K + +V+AR +F  MPE D VS
Sbjct: 182 AYVQNGRIEDARRL--FESKADW--ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 237

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ YA N +  E+ +LF E       R  F ++ ++S       L   R++     
Sbjct: 238 WNTMISGYAQNGELLEAQRLFEESPV----RDVFTWTAMVSGYVQNGMLDEARRVFDGMP 293

Query: 303 VTTAIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFAN 335
              ++S                            V   N+++  YA+ G   +A+  F  
Sbjct: 294 EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDR 353

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +    ++ W A+I+ Y Q G  EEAL+LF+EM R     +++TF S L   AE+A+L LG
Sbjct: 354 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQ+H  V+++G  S  + G+ALL MY K G++ DA   F+ + E+ +VSWN +I+  A++
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 473

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  FE M ++G  PD V+++ VLSACSH GL+++G +YF SMTQ Y +    +H
Sbjct: 474 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 533

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  M+D+L R+G  D+A+ LM  MPFEPD   W +++ + RIH N E  +KAA  +F+ME
Sbjct: 534 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEME 593

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              ++  YV +SN+YA +G+W  V +++  MR+RGV+KV  YSWVE+++K+H FT  D +
Sbjct: 594 P-DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 652

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HP+ + I   +E L  +MKKEGY   T   LHD +EE KV  LKYHSE+LA+AF ++  P
Sbjct: 653 HPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIP 712

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G PI V+KNLR C DCH A+K ISKI GR I +RDS RFHHF  G CSC D+W
Sbjct: 713 AGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 247/545 (45%), Gaps = 75/545 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++++S N +ISG + +     AR+LF  M  R  VSW ++I G  +    R A  LF
Sbjct: 75  MPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLF 134

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII---KFGYNSI---------- 107
             M      + D V++  +LSG ++     E  ++  ++       +N +          
Sbjct: 135 DQM-----PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRI 189

Query: 108 --------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
                         LI  N ++  Y K   L  AR +F  MP++D VS+N +I+G+A+ G
Sbjct: 190 EDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG 249

Query: 154 LNEEAIKLFVEMQHLGFKPSD--FTFAAALSAGVGLADIALGRQVHAFVVKTNFV----- 206
              EA +LF E       P    FT+ A +S  V    +   R+V   + + N V     
Sbjct: 250 ELLEAQRLFEE------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAI 303

Query: 207 ----------------------ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                                 +NV   N ++  Y+++  + +AR  F  MP+ D +S+ 
Sbjct: 304 IAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWA 363

Query: 245 VMITCYAWNEQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            +I  YA +   +E+L LF E++    R +RS   F++ LS  A    L++G+Q+H + +
Sbjct: 364 AIIAGYAQSGYGEEALHLFVEMKRDGERLNRS--TFTSTLSTCAEIAALELGKQVHGRVV 421

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S   V N+L+ MY KCG  ++A  +F  +     V W  MI+ Y + G  +EAL 
Sbjct: 422 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 481

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF  M +  I  D  T   +L A +    +  G +  +S     G  +N    + ++D+ 
Sbjct: 482 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 541

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
            ++G L DA    K MP E +  +W AL+ A   +G+ +   K+ + + +   +PD+  +
Sbjct: 542 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE--MEPDNSGM 599

Query: 481 LSVLS 485
             +LS
Sbjct: 600 YVLLS 604


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/741 (36%), Positives = 436/741 (58%), Gaps = 3/741 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LIS +   GN+  A  +FN + +R  +SW  ++  Y+Q     E+ ++F  MR     
Sbjct: 300  NSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFH-D 358

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            + +  T +TLLS   + D       +H  ++K G++S++ +CN+L+  Y      + A  
Sbjct: 359  EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADL 418

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VFK+MP KD +S+N+L+  F  +G + +A+ +   M   G   +  TF +AL+A      
Sbjct: 419  VFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
               GR +H  VV +   +N  + NAL+ +Y K   +  +R++  +MP  D V++N +I  
Sbjct: 479  FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIVTTAIS 308
            YA NE   ++L  F+ L+      +     ++LS      DL + G+ +H   +     S
Sbjct: 539  YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFES 598

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +  V NSL+ MYAKCG    ++++F  L + S + W A+++A    G+ EE L L  +M 
Sbjct: 599  DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMR 658

Query: 369  RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
               +S DQ +F+  L A+A+LA L  G+QLH   ++ GF  + F  +A  DMY+K G + 
Sbjct: 659  SFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIG 718

Query: 429  DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            + ++       R++ SWN LISA  ++G  +   ++F +M++ G +P  V+ +S+L+ACS
Sbjct: 719  EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS 778

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H GL+++GL Y++ + + + L P  EH   ++D+L RSG   EAE  +++MP +P++++W
Sbjct: 779  HGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 838

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             S++ SC+IH++L+  +KAA+ L K+E   D + +V  SN++A  G+WE V  V+K M  
Sbjct: 839  RSLLASCKIHRDLDRGRKAAENLSKLEP-EDDSVFVLSSNMFATTGRWEDVENVRKQMGF 897

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            + ++K  A SWV+LK KV  F   D  HPQT EI  K+E++ + +K+ GY  DTS AL D
Sbjct: 898  KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD 957

Query: 669  EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
             DEE K  +L  HSERLA+A+AL++TPEGS + + KNLR C+DCH+  K +S++ GR I 
Sbjct: 958  TDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIV 1017

Query: 729  VRDSSRFHHFKDGFCSCRDFW 749
            +RD  RFHHF+ G CSC+D+W
Sbjct: 1018 LRDQYRFHHFESGLCSCKDYW 1038



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 256/494 (51%), Gaps = 3/494 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + + TN LI+ Y K G +  AR LF+ M  R  VSW  ++ G  +   + E  + F  M 
Sbjct: 92  SVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKM- 150

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            D G  P     A+L++ C    +   E +QVH  + K G  S + +  +++  Y     
Sbjct: 151 CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL 210

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  +R+VF+EMP ++ VS+ +L+ G++ +G  EE I ++  M+  G + ++ + +  +S+
Sbjct: 211 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISS 270

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D +LGRQ+   V+K+     + V N+L+ ++     V  A  +F ++ E D +S+
Sbjct: 271 CGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISW 330

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++  YA N   +ES ++F  ++    + +    STLLSV+ +    + GR IH   + 
Sbjct: 331 NSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVK 390

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S V V N+L+ MYA  GR EEA  +F  +     + W ++++++V  G   +AL +
Sbjct: 391 MGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGI 450

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
              M R   S +  TF S L A         G+ LH  V+ SG   N   G+AL+ MY K
Sbjct: 451 LCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGK 510

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G +  + +   +MP R++V+WNALI   A+N D    L +F+ +   G   + ++++SV
Sbjct: 511 IGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSV 570

Query: 484 LSACSHCG-LIEEG 496
           LSAC   G L+E G
Sbjct: 571 LSACLVPGDLLERG 584



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 247/461 (53%), Gaps = 3/461 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA  +K      ++  N+L++ Y K   +  AR +F +MP ++ VS+N +++G  + GL
Sbjct: 80  LHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGL 139

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             E ++ F +M  LG KPS F  A+ ++A G   +    G QVH FV K+  + +V+V+ 
Sbjct: 140 YLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST 199

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           A+L LY  +  V  +RK+F EMP+ + VS+  ++  Y+   + +E + +++ ++    + 
Sbjct: 200 AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVEC 259

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           ++   S ++S      D  +GRQI  Q I +   S++ V NSL+ M+   G  + A  IF
Sbjct: 260 NENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIF 319

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +S   T+ W ++++AY Q G++EE+  +F  M R +   +  T +++L    ++    
Sbjct: 320 NQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQK 379

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+ +H  V++ GF S V   + LL MYA +G  ++A   FK+MP ++++SWN+L+++  
Sbjct: 380 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFV 439

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
            +G +   L     M+++G   + V+  S L+AC      ++G +  + +     L   +
Sbjct: 440 NDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQ 498

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               ++V +  + G    + +++ QMP   D + W+++I  
Sbjct: 499 IIGNALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGG 538



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 184/370 (49%), Gaps = 17/370 (4%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR +HA  VK     +V   N L+++Y+K   V  AR LF +MP  + VS+N M++    
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIVTTAISEVK 311
              Y E ++ F+++       S F  ++L++       + + G Q+H     +  +S+V 
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+ +++ +Y   G    ++++F  +   + V WT+++  Y  KG  EE ++++  M    
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ + + ++ +   L   SLG+Q+   VI+SG  S +   ++L+ M+   G++  A 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV---SLLSVLSACS 488
             F ++ ER+ +SWN++++A AQNG  + + + F  M +   + +S    +LLSVL    
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVD 376

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR----SGCFDEAEKLMAQMPFEPD 544
           H        Q +        ++   +    + + L R    +G  +EA+ +  QMP   D
Sbjct: 377 H--------QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP-TKD 427

Query: 545 EIMWSSVINS 554
            I W+S++ S
Sbjct: 428 LISWNSLMAS 437



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 31/351 (8%)

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           C++ ++ +   L  F +  F++  R                    GR +H   +      
Sbjct: 49  CFSLSDHWNPELSCFDQTGFSQITRET-----------------TGRALHALCVKGLVRL 91

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V   N+L++MY K GR + A+ +F  +   + V W  M+S  V+ G   E +  F +MC
Sbjct: 92  SVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC 151

Query: 369 RANISADQATFASILRASAELASL-SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              I       AS++ A     S+   G Q+H FV +SG +S+V+  +A+L +Y   G +
Sbjct: 152 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 211

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             + + F+EMP+RN+VSW +L+   +  G+ +  +  ++ M   G + +  S+  V+S+ 
Sbjct: 212 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISS- 270

Query: 488 SHCGLIEE---GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
             CGL+++   G Q    +  K  L  K     S++ +    G  D A  +  Q+  E D
Sbjct: 271 --CGLLKDESLGRQIIGQVI-KSGLESKLAVENSLISMFGNMGNVDYANYIFNQIS-ERD 326

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFK-MEKLRDAAPYVAMSNIYAVAG 594
            I W+S++ +   + ++E     + ++F  M +  D      +S + +V G
Sbjct: 327 TISWNSIVAAYAQNGHIE----ESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/745 (36%), Positives = 433/745 (58%), Gaps = 2/745 (0%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +T   N L+S Y   G+L +A  +F++M  R AV++  LI G SQ     +A +LF  M+
Sbjct: 305  DTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQ 364

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             DG  +PD  T A+L+  CS   T     Q+HA   K G+ S   I  +L++ Y K   +
Sbjct: 365  LDG-LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDI 423

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            + A   F E   ++ V +N ++  +        + ++F +MQ     P+ +T+ + L   
Sbjct: 424  ETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 483

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            + L D+ LG Q+H+ ++KT+F  N +V + L+D+Y+K   +  A  +       D VS+ 
Sbjct: 484  IRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 543

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             MI  Y       ++L  FR++        +   +  +S  A    L+ G+QIH Q  V+
Sbjct: 544  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 603

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               S++   N+LV +Y+KCG  EEA   F        + W A++S + Q GN EEAL +F
Sbjct: 604  GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 663

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
              M R  I ++  TF S ++A++E A++  GKQ+H+ + ++G+ S     +A++ MYAK 
Sbjct: 664  ARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKC 723

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            GS+ DA + F E+  +N VSWNA+I+A +++G     L SF+ M+ S  +P+ V+L+ VL
Sbjct: 724  GSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 783

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL+++G++YF SM  +Y L PK EHY  +VD+L R+G    A+  + +MP EPD
Sbjct: 784  SACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPD 843

Query: 545  EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             ++W +++++C +HKN+E  + AA  L ++E   D+A YV +SN+YAV  +W++    ++
Sbjct: 844  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVCRKWDARDLTRQ 902

Query: 605  AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
             M+E+GV+K    SW+E+K+ +H F   D+ HP  +EI    ++L +   + GY  D   
Sbjct: 903  KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFS 962

Query: 665  ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
             L +  +E K  ++  HSE+LAI+F L++ P   PI VMKNLR C DCH  IK +SK++ 
Sbjct: 963  LLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSN 1022

Query: 725  REITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD+ RFHHF+ G CSC+D+W
Sbjct: 1023 REIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 300/571 (52%), Gaps = 6/571 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++T+  N LI  Y ++G +  AR +F+ +  +   SW  +I G S+     EA +LF DM
Sbjct: 203 KSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDM 262

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G     Y  F+++LS C + ++     Q+H  ++K G++S   +CN+LV  Y  +  
Sbjct: 263 YVLGIMPTPY-AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGS 321

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  +F  M Q+D+V++N LI G ++ G  E+A++LF  MQ  G +P   T A+ + A
Sbjct: 322 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVA 381

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+Q+HA+  K  F  N  +  ALL+LY+K   +  A   F E    + V +
Sbjct: 382 CSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLW 441

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           NVM+  Y   +  + S ++FR++Q      +Q+ + ++L       DL++G QIH+Q I 
Sbjct: 442 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 501

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           T+      V + L+DMYAK G+ + A +I    +    V WT MI+ Y Q    ++AL  
Sbjct: 502 TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 561

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F +M    I +D+    + + A A L +L  G+Q+H+    SGF S++   +AL+ +Y+K
Sbjct: 562 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSK 621

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G++++A   F++    + ++WNAL+S   Q+G+ +  L+ F  M + G   ++ +  S 
Sbjct: 622 CGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSA 681

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           + A S    +++G Q  +++  K     + E   +++ +  + G   +A+K   ++  + 
Sbjct: 682 VKAASETANMKQGKQ-VHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMK- 739

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +E+ W+++IN+   H    F  +A D   +M
Sbjct: 740 NEVSWNAMINAYSKHG---FGSEALDSFDQM 767



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 254/497 (51%), Gaps = 2/497 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +  L+  Y+  G+L  A ++F+ M +RT  +W  +I   + ++   + F LF  
Sbjct: 100 DNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGR 159

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKI 121
           M  +  + P+  TF+ +L  C     A +++ Q+HA II  G     I+CN L+D Y + 
Sbjct: 160 MVNENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRN 218

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D ARRVF  +  KD  S+ A+I+G +K     EAI+LF +M  LG  P+ + F++ L
Sbjct: 219 GFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVL 278

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           SA   +  + +G Q+H  V+K  F  + +V NAL+ LY     ++ A  +F  M + D V
Sbjct: 279 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAV 338

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +YN +I   +     +++++LF+ +Q    +      ++L+   ++   L  G+Q+H  T
Sbjct: 339 TYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYT 398

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                 S  K+  +L+++YAKC   E A   F      + V W  M+ AY    +L  + 
Sbjct: 399 TKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSF 458

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +F +M    I  +Q T+ SIL+    L  L LG+Q+HS +I++ F  N +  S L+DMY
Sbjct: 459 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMY 518

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G L  A         +++VSW  +I+   Q       L +F  M+  G + D V L 
Sbjct: 519 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 578

Query: 482 SVLSACSHCGLIEEGLQ 498
           + +SAC+    ++EG Q
Sbjct: 579 NAVSACAGLQALKEGQQ 595



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 258/530 (48%), Gaps = 9/530 (1%)

Query: 26  RELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSE 85
           R +  ++      S+T +    S+   F+E     +D   + G  P++ T   LL GC +
Sbjct: 23  RTVLRTLCQIRRASFTAISVSISEDESFQENG---IDSVENCGIRPNHQTLKWLLEGCLK 79

Query: 86  PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
            + + +E  ++H+ I+K G+++   +   L+D Y     LD A +VF EMP++   ++N 
Sbjct: 80  TNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNK 139

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG--RQVHAFVVK 202
           +I   A   L+ +   LF  M +    P++ TF+  L A  G   +A     Q+HA ++ 
Sbjct: 140 MIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIY 198

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
               ++  V N L+DLYS++  V  AR++F  +   D  S+  MI+  + NE   E+++L
Sbjct: 199 QGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRL 258

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F ++       + + FS++LS       L+IG Q+H   +     S+  V N+LV +Y  
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 318

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G    A+ IF+N+S    V +  +I+   Q G  E+A+ LF  M    +  D  T AS+
Sbjct: 319 LGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASL 378

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           + A +   +L  G+QLH++  + GF SN     ALL++YAK   ++ A+  F E    N+
Sbjct: 379 VVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENV 438

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           V WN ++ A     D + + + F  M      P+  +  S+L  C   G +E G Q  +S
Sbjct: 439 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ-IHS 497

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
              K   +      + ++D+  + G  D A  ++ +   + D + W+++I
Sbjct: 498 QIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 546



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 37/317 (11%)

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           + + +   L  I    +TA+  +  +  + +E     +E C   I  +  T   +L    
Sbjct: 21  KTRTVLRTLCQIRRASFTAISVSISEDESFQENGIDSVENC--GIRPNHQTLKWLLEGCL 78

Query: 388 EL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           +   SL  G++LHS +++ GF +N      LLD Y   G L  A++ F EMPER I +WN
Sbjct: 79  KTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWN 138

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIE 494
            +I   A    +      F  MV     P+  +   VL AC             H  +I 
Sbjct: 139 KMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIY 198

Query: 495 EGL-----------------QYFNSMTQKYKLRPKKEH--YASMVDILCRSGCFDEAEKL 535
           +GL                  + +   + +     K+H  + +M+  L ++ C  EA +L
Sbjct: 199 QGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRL 258

Query: 536 MAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
              M      P    +SSV+++C+  ++LE  ++    + K+    D     A+ ++Y  
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 318

Query: 593 AGQWESVSQVKKAMRER 609
            G   S   +   M +R
Sbjct: 319 LGSLISAEHIFSNMSQR 335


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 267/812 (32%), Positives = 457/812 (56%), Gaps = 75/812 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N ++ N++++GYVK G L+ A ELF  M  R   SW  L+ GY Q  Q+  + + F
Sbjct: 66  IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M   G S P+  TFA  +  C      +  +Q+   + KFG      +  +LVD + +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185

Query: 121 IRCLDLARRVF-------------------------------KEMPQKDSVSFNALITGF 149
              +DLA R+F                                 MP++D VS+N +++  
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G   EA+ + V+MQ  G +    T+ ++L+A   L+ +  G+Q+HA V++     + 
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           +VA+AL++LY+K  C  EA+ +F  + + + V++ V+I  +  +  + ES++LF +++  
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC------ 323
                QF  +TL+S   +++DL +GRQ+H+  + +  I  V V+NSL+ MYAKC      
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 324 -------------------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
                                    G   +A+E F  +S  + + W AM+ AY+Q G  E
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEE 485

Query: 359 EALNLF-IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           + L ++ + +   ++  D  T+ ++ +  A+L +  LG Q+    ++ G + +    +A+
Sbjct: 486 DGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAV 545

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY+K G + +A + F  +  ++IVSWNA+I+  +Q+G  +  ++ F+D+++ G +PD 
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 605

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +S ++VLS CSH GL++EG  YF+ M + + + P  EH++ MVD+L R+G   EA+ L+ 
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 665

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MP +P   +W +++++C+IH N E A+ AA  +F+++   D+  Y+ M+ IYA AG+ +
Sbjct: 666 EMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS-PDSGSYMLMAKIYADAGKSD 724

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
             +Q++K MR++G++K   YSW+E+ +KVHVF A+D  HPQ   IR+K++ LM+++ + G
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLG 784

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y    S        EI      +HSE+LA+AF L++ P   PI +MKNLR C DCH  IK
Sbjct: 785 YVRTDS-----PRSEI------HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIK 833

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LIS +TGRE  +RD+ RFHHF  G CSC D+W
Sbjct: 834 LISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 199/483 (41%), Gaps = 75/483 (15%)

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARK-------------------------- 230
           H  +V       VF+ N LL  Y     + +AR+                          
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86

Query: 231 ------LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS--QFPFSTLL 282
                 LFG MP  D  S+N +++ Y  ++QY  SL+ F  +  +  D S   F F+  +
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSG-DSSPNAFTFAYAM 145

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG----------RFEE---- 328
                  +  +  Q+        +  +  VA +LVDM+ +CG          R +E    
Sbjct: 146 KSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIF 205

Query: 329 -----------------AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
                            A E+F ++     V W  M+SA  Q G + EAL++ ++M    
Sbjct: 206 CRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T+ S L A A L+SL  GKQLH+ VIR+    + +  SAL+++YAK G  K+A 
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAK 325

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  + +RN V+W  LI+   Q+G    +++ F  M       D  +L +++S C  C 
Sbjct: 326 GVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC--CS 383

Query: 492 LIEEGL-QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            ++  L +  +S+  K           S++ +  +      AE +   M  E D + W+S
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTS 442

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM-RER 609
           +I +     N+  A+    + F     ++   + AM   Y   G  E   ++   M  E+
Sbjct: 443 MITAHSQVGNIAKAR----EFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEK 498

Query: 610 GVR 612
            VR
Sbjct: 499 DVR 501


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/744 (36%), Positives = 442/744 (59%), Gaps = 5/744 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMV-DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y   G +  AR +F+    DR AVSW  ++  + + ++  +A +LF +M    
Sbjct: 138 ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM-VWS 196

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+   F+ +++ C+         +VHA +++ GY+  +   N+LVD Y K+  + +A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             VF ++P+ D VS+NA I+G    G ++ A++L ++M+  G  P+ FT ++ L A  G 
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316

Query: 188 ADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              A    RQ+H F++K     + ++  AL+D+Y+K+  + +ARK+F  +P  D + +N 
Sbjct: 317 GAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNA 376

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+  +    + ESL LF  ++    D ++   + +L   A+   +    Q+H       
Sbjct: 377 LISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIG 436

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            +S+  V N L+D Y KC     A ++F   S  + + +T+MI+A  Q  + E+A+ LF+
Sbjct: 437 FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFM 496

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM R  +  D    +S+L A A L++   GKQ+H+ +I+  FM++VF+G+AL+  YAK G
Sbjct: 497 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCG 556

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S++DA   F  +P++ +VSW+A+I   AQ+G  +  L  F  MV     P+ ++L SVL 
Sbjct: 557 SIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLC 616

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+H GL++E   YF+SM + + +   +EHY+ M+D+L R+G  D+A +L+  MPFE + 
Sbjct: 617 ACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANA 676

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++ + R+H++ E  K AA++LF +E  + +  +V ++N YA AG W+ V++V+K 
Sbjct: 677 AVWGALLAASRVHRDPELGKLAAEKLFVLEPEK-SGTHVLLANTYASAGMWDEVAKVRKL 735

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++  V+K  A SWVELK +VH F   D+ HP+  +I  K+E L   M K GY P+    
Sbjct: 736 MKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVD 795

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD D+  K   L +HSERLA+AFALI+TP G+PI V KNLR C DCH A K ISKI  R
Sbjct: 796 LHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSR 855

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD +RFHHF DG CSC D+W
Sbjct: 856 EIIIRDINRFHHFSDGACSCGDYW 879



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 176/597 (29%), Positives = 311/597 (52%), Gaps = 12/597 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K     +AR +F+   D   VSW+ L+  YS     REA   F  MR  G  
Sbjct: 41  NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++     L   C+ PD A   +QVHA  +  G +  + + N+LV  Y     +D ARR
Sbjct: 101 CNEFALPIVL--KCA-PD-AGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARR 156

Query: 130 VFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           VF E  + +++VS+N +++ F K     +A++LF EM   G +P++F F+  ++A  G  
Sbjct: 157 VFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSR 216

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+  GR+VHA VV+T + ++VF ANAL+D+YSK   +  A  +FG++P+ D VS+N  I+
Sbjct: 217 DLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFIS 276

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS--VVANKLDLQIGRQIHTQTIVTTA 306
               +   + +L+L  +++ +    + F  S++L     A      +GRQIH   I   A
Sbjct: 277 GCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA 336

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S+  +  +LVDMYAK G  ++A+++F  +     + W A+IS     G   E+L+LF  
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCR 396

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M +     ++ T A++L+++A L ++S   Q+H+   + GF+S+    + L+D Y K   
Sbjct: 397 MRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNC 456

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L+ A + F+E    NI+++ ++I+A +Q    +  +K F +M++ G +PD   L S+L+A
Sbjct: 457 LRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNA 516

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+     E+G Q    + ++ K         ++V    + G  ++A+   + +P +   +
Sbjct: 517 CASLSAYEQGKQVHAHLIKR-KFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVV 574

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
            WS++I     H +    K+A D   +M   R A  ++ ++++         V + K
Sbjct: 575 SWSAMIGGLAQHGH---GKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/554 (29%), Positives = 271/554 (48%), Gaps = 41/554 (7%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +HA ++K G   +    N L+  Y K R    ARRVF E P    VS+++L+T ++   
Sbjct: 25  HIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNA 82

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  EA+  F  M+  G + ++F     L       D  LG QVHA  V T    ++FVAN
Sbjct: 83  LPREALAAFRAMRARGVRCNEFALPIVLKCA---PDAGLGVQVHAVAVSTGLSGDIFVAN 139

Query: 214 ALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           AL+ +Y     V EAR++F E   + + VS+N M++ +  N++  ++++LF E+ ++   
Sbjct: 140 ALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVR 199

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F FS +++      DL+ GR++H   + T    +V  AN+LVDMY+K G    A  +
Sbjct: 200 PNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR--ASAELA 390
           F  +     V W A IS  V  G+ + AL L ++M  + +  +  T +SIL+  A A   
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAG 319

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           + +LG+Q+H F+I++   S+ + G AL+DMYAK G L DA + F+ +P ++++ WNALIS
Sbjct: 320 AFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALIS 379

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ------------ 498
            C+  G    +L  F  M + G   +  +L +VL + +    I +  Q            
Sbjct: 380 GCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLS 439

Query: 499 -----------YFNSMTQKYKLRPKKEH-------YASMVDILCRSGCFDEAEKLMAQM- 539
                      Y+     +Y  +  +EH       + SM+  L +    ++A KL  +M 
Sbjct: 440 DSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML 499

Query: 540 --PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
               EPD  + SS++N+C      E  K+    L K + + D     A+   YA  G  E
Sbjct: 500 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIE 559

Query: 598 SVSQVKKAMRERGV 611
                   + ++GV
Sbjct: 560 DADLAFSGLPDKGV 573



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 49/316 (15%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           + + +L   A   SL LG  +H+ +++SG + + F  + LL  Y+K      A + F E 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLL-HAFR-NHLLSFYSKCRLPGSARRVFDET 63

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL----- 492
           P+   VSW++L++A + N   +  L +F  M   G + +  +L  VL      GL     
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVH 123

Query: 493 ---IEEGLQ----YFNSMTQKY---------------KLRPKKE-HYASMVDILCRSGCF 529
              +  GL       N++   Y                 R +    +  M+    ++   
Sbjct: 124 AVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRC 183

Query: 530 DEAEKLMAQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
            +A +L  +M +    P+E  +S V+N+C   ++LE  +K    + +    +D     A+
Sbjct: 184 SDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANAL 243

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            ++Y+  G     + V        V K    SW       + F +   LH      +  +
Sbjct: 244 VDMYSKLGDIHMAALVFGK-----VPKTDVVSW-------NAFISGCVLHGHD---QHAL 288

Query: 647 ENLMQEMKKEGYKPDT 662
           E L+Q MK  G  P+ 
Sbjct: 289 ELLLQ-MKSSGLVPNV 303


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/750 (36%), Positives = 425/750 (56%), Gaps = 38/750 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N++IS Y   GNL  AR+LFN      +++W+ L+ GY +     E  + F
Sbjct: 63  MPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQF 122

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M +DG   P   T  ++L  CS     +    +H   IK    + + +   LVD Y K
Sbjct: 123 SQMWSDG-QKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSK 181

Query: 121 IRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +CL  A  +F  +P +K+ V + A++TG+A+ G + +AI+ F EM++ G + + FTF +
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++  A GRQVH  ++ + F  NV+V +AL+D+Y+K   +  AR +   M   D
Sbjct: 242 ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDD 301

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V +N MI     +   +E+L LF ++         F + ++L  +A+  +L+IG  +H+
Sbjct: 302 VVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHS 361

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            TI T   +   V+N+LVDMYAK G    A ++F  +     + WT++++ YV  G  E+
Sbjct: 362 LTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK 421

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF +M  A +  DQ   A +  A AEL  +  G+Q+H+  I+S   S + + ++L+ 
Sbjct: 422 ALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLIT 481

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G L+DAI+    M  RN++SW A+I   AQNG                       
Sbjct: 482 MYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG----------------------- 518

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                       L+E G  YF SM + Y ++P  + YA M+D+L R+G  +EAE L+ +M
Sbjct: 519 ------------LVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRM 566

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  +W S++++CR+H NLE  ++A   L K+E   ++ PYV +SN+++VAG+WE  
Sbjct: 567 DVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEP-SNSLPYVLLSNMFSVAGRWEDA 625

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           + +++AM+  G+ +   YSW+E+KS+VH F + D  HP   EI  KI+ +M  +K+ G+ 
Sbjct: 626 AHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHV 685

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD + AL D DEE K  SL YHSE+LA+AF L+   +G+PI + KNLR C DCH+A+K I
Sbjct: 686 PDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYI 745

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S I  R I +RD + FHHF +G CSC DFW
Sbjct: 746 SSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 187/393 (47%), Gaps = 38/393 (9%)

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL----- 266
           +N LL   SK+  V EARKLF +MP  D  ++N+MI+ YA      E+ KLF E      
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99

Query: 267 ---------------------QFTRF-----DRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                                QF++        SQ+   ++L   +    L  G+ IH  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEE 359
            I     + + VA  LVDMY+KC    EA+ +F +L    + V WTAM++ Y Q G   +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+  F EM    + ++  TF SIL A   +++ + G+Q+H  +I SGF  NV+  SAL+D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G L  A      M   ++V WN++I  C  +G  +  L  F  M     + D  +
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             SVL + + C  ++ G +  +S+T K      K    ++VD+  + G    A  +  ++
Sbjct: 340 YPSVLKSLASCKNLKIG-ESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             + D I W+S++    +H    F +KA  QLF
Sbjct: 399 -LDKDVISWTSLVTG-YVHNG--FHEKAL-QLF 426


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/746 (36%), Positives = 432/746 (57%), Gaps = 8/746 (1%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N LI  +   G++  A  +FN M +R  +SW  +I   +Q     E+F+ F  MR   
Sbjct: 197 AANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVH 256

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             + +Y T + LLS C   D       VH   +K+G  S + +CN+L+  Y        A
Sbjct: 257 -EEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDA 315

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F+ MP++D +S+N+++  + ++G    A+K+F EM  +  + +  TF +AL+A +  
Sbjct: 316 ELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDP 375

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                G+ +H FVV     + + + N L+  Y K   + EA+K+F  MP++D V++N +I
Sbjct: 376 EFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALI 435

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD----LQIGRQIHTQTIV 303
             +A N +  E++  F+ ++      S   + T+++++ + L     ++ G  IH  T+V
Sbjct: 436 GGFANNAELNEAVAAFKLMR--EGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVV 493

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           T    +  V +SL+ MYAKCG    +  IF  L   ++  W A+I+A  + G  EEAL L
Sbjct: 494 TGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKL 553

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            + M  A I  DQ  F++ L  +A+LA L  G+QLH   I+ GF  + F  +A +DMY K
Sbjct: 554 VVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGK 613

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G L DA++   +  +R+ +SWN LIS  A++G      ++F DM++ G +P+ VS + +
Sbjct: 614 CGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCL 673

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACSH GL++EGL Y+ SMT  Y ++P  EH   M+D+L RSG   EAE  + +MP  P
Sbjct: 674 LSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPP 733

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           ++++W S++ SCRI++NL+  +KAA  L +++   D+A YV  SN++A  G+WE V  V+
Sbjct: 734 NDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSA-YVLYSNVFATIGRWEDVEDVR 792

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             M    ++K  A+SWV+ K  + +F   D+ HPQ  +I  K+  LM+ + + GY PDTS
Sbjct: 793 GQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTS 852

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            +L D DEE K  ++  HSER+A+AF LIN PEGS + + KNLR C DCH+  K +S + 
Sbjct: 853 YSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVL 912

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GR+I +RD  RFHHF +G CSC D+W
Sbjct: 913 GRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 267/541 (49%), Gaps = 8/541 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  A+ +F+ M +R   SW  ++ GY +   + EA   F D+    G  P    
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDI-CGIGIKPSGFM 60

Query: 76  FATLLSGCSEPDT-ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            A+L++ C++    A E  Q H   IK G    + +  S V  Y     +  A+++F EM
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P ++ VS+ +L+  ++  G  +E I  +  M+H G   ++   A  +S+   L DI LG 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+    +K      V  AN+L+ ++     + EA  +F EM E D +S+N +I+  A N 
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            ++ES + F  ++    + +    S LLS+  +   L+ G+ +H   +     S + + N
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +L+ +Y+  GR ++A+ IF  +     + W +M++ YVQ G    AL +F EM       
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  TF S L A  +    + GK LH FV+  G    +  G+ L+  Y K   + +A + F
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSAC-SHCGL 492
           + MP+ + V+WNALI   A N +    + +F+ M + S    D ++++++L +C +H  L
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480

Query: 493 IEEGLQ-YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           I+ G+  + +++   + L    +  +S++ +  + G    +  +  Q+ F+   + W+++
Sbjct: 481 IKYGIPIHAHTVVTGFDLDQHVQ--SSLITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAI 537

Query: 552 I 552
           I
Sbjct: 538 I 538



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 212/452 (46%), Gaps = 5/452 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+S Y  +G    A  +F  M +R  +SW  ++  Y Q  +   A K+F +M 
Sbjct: 295 NICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEML 354

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                + +YVTF + L+ C +P+       +H  ++  G    LII N+L+  Y K   +
Sbjct: 355 WM-KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKM 413

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF-TFAAALSA 183
             A++VF+ MP+ D V++NALI GFA      EA+  F  M+       D+ T    L +
Sbjct: 414 AEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473

Query: 184 GVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            +   D I  G  +HA  V T F  +  V ++L+ +Y+K   +  +  +F ++       
Sbjct: 474 CLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSV 533

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I   A     +E+LKL   ++    +  QF FST LSV A+   L+ G+Q+H  TI
Sbjct: 534 WNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTI 593

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 +  + N+ +DMY KCG  ++A  I    +  S + W  +IS   + G   +A  
Sbjct: 594 KLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKE 653

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVIRSGFMSNVFSGSALLDMY 421
            F +M +  +  +  +F  +L A +    +  G   + S     G    +     ++D+ 
Sbjct: 654 TFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLL 713

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            +SG L +A     EMP   N + W +L+++C
Sbjct: 714 GRSGRLVEAEAFITEMPIPPNDLVWRSLLASC 745



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 163/337 (48%), Gaps = 5/337 (1%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   +  A+ +F  M E +  S+N M++ Y     Y E++  FR++       S F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 278 FSTLLSVVANKLDLQI--GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
            ++L++   NK  +    G Q H   I    I +V V  S V  YA  G    A+++F  
Sbjct: 61  IASLVT-ACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   + V WT+++ +Y   G+ +E +N +  M    I  ++   A ++ +   L  + LG
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
            QL    ++ G  + V + ++L+ M+   G + +A   F EM ER+ +SWN++ISA AQN
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
              + + + F  M     + +  +L  +LS C     ++ G +  + +  KY L      
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG-KGVHGLAVKYGLESNICL 298

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             +++ +   +G   +AE +  +MP E D I W+S++
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMP-ERDLISWNSML 334



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY+K GR   A+ +F  +S  +   W  M+S YV+ G+  EA+  F ++C   I      
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 379 FASILRASAELASLSL-GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
            AS++ A  + + ++  G Q H F I+ G + +VF G++ +  YA  G + +A + F EM
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P+RN+VSW +L+ + + NG  +  + +++ M   G   +  ++  V+S+C     I  G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           Q       K+ L  K     S++ +    G  +EA  +  +M  E D I W+S+I++
Sbjct: 181 QLLGH-ALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMN-ERDTISWNSIISA 235


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 288/745 (38%), Positives = 444/745 (59%), Gaps = 9/745 (1%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR--TDGGS 69
            L++G+ + G +  A+ +F  M DR AV+   L+ G ++++Q  EA K+F +M+   +  S
Sbjct: 392  LVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINS 451

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLAR 128
            +   V  +T     +  +   +  +VHA + + G  ++ + I N+LV+ Y K   +D A 
Sbjct: 452  ESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC 511

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             VF+ MP KD+VS+N++I+G       EEA+  F  M+  G  PS+F+  + LS+   L 
Sbjct: 512  SVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             + LGRQ+H    K     +V V+NALL LY++ D + E +K+F +MPE D VS+N  I 
Sbjct: 572  WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631

Query: 249  CYA-WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A +     ++LK F E+    +  ++  F  +L+ V++   L +G QIH   +  +  
Sbjct: 632  ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691

Query: 308  SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +  + N+L+  Y KC + E+ + IF+ +S     V W +MIS Y+  G L +A++L   
Sbjct: 692  DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 751

Query: 367  MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            M +     D  TFA++L A A +A+L  G ++H+  +R+   S+V  GSAL+DMYAK G 
Sbjct: 752  MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 811

Query: 427  LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
            +  A + F+ MP RNI SWN++IS  A++G  Q  LK F  M Q G  PD V+ + VLSA
Sbjct: 812  IDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSA 871

Query: 487  CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            CSH GL++EG ++F SM + Y L P+ EH++ MVD+L R+G   + E  +  MP +P+ +
Sbjct: 872  CSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNIL 931

Query: 547  MWSSVINS-CRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            +W +V+ + CR + +N E  ++AA  L ++E  ++A  YV +SN++A  G WE V + + 
Sbjct: 932  IWRTVLGACCRANGRNTELGQRAAKMLIELEP-QNAVNYVLLSNMHAAGGNWEDVVEARL 990

Query: 605  AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            AMR+  V+K    SWV +K  VH+F A D+ HP+  +I  K++ LM +++  GY P+T  
Sbjct: 991  AMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKY 1050

Query: 665  ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            AL+D + E K E L YHSE+LAIAF L    E  PI +MKNLR C DCH A K ISKI G
Sbjct: 1051 ALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRIMKNLRVCGDCHTAFKYISKIVG 1109

Query: 725  REITVRDSSRFHHFKDGFCSCRDFW 749
            R+I +RDS+RFHHF  G CSC D+W
Sbjct: 1110 RQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 305/580 (52%), Gaps = 21/580 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ YV+ GNL +AR+LF+ M  +  VSW+ LI GY+Q     EA  LF  +    G 
Sbjct: 179 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGV-ISSGL 237

Query: 70  DPDYVTFATLLSGCSE-PDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCKIR-CLDL 126
            P++    + L  C +   T  +L +Q+HA I K    S +I+ N L+  Y      +D 
Sbjct: 238 LPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDD 297

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ----HLGFKPSDFTFAAALS 182
           A RVF E+  ++SV++N++I+ + + G    A KLF  MQ     L  +P+++T  + ++
Sbjct: 298 AHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVT 357

Query: 183 AGVGLAD--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   LAD  + L  Q+   + K+ F+ +++V +AL++ ++++  +  A+ +F +M + + 
Sbjct: 358 AACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNA 417

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR----Q 296
           V+ N ++   A   Q +E+ K+F+E++      S+     LLS      +L+ G+    +
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSE-SLVVLLSTFTEFSNLKEGKRKGQE 476

Query: 297 IHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           +H     +  + + + + N+LV+MY KC   + A  +F  +    TV W +MIS      
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             EEA++ F  M R  +     +  S L + + L  L+LG+Q+H    + G   +V   +
Sbjct: 537 RFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN 596

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ-NGDAQATLKSFEDMVQSGYQ 474
           ALL +YA++ S+ +  + F +MPE + VSWN+ I A A+        LK F +M+Q+G++
Sbjct: 597 ALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR 656

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ V+ +++L+A S   ++  G Q  +++  KY +        +++    +    ++ E 
Sbjct: 657 PNRVTFINILAAVSSFSVLGLGHQ-IHALILKYSVADDNAIENALLAFYGKCEQMEDCEI 715

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           + ++M    DE+ W+S+I S  +H  +    KA D ++ M
Sbjct: 716 IFSRMSERRDEVSWNSMI-SGYLHSGI--LHKAMDLVWPM 752



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 248/477 (51%), Gaps = 21/477 (4%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +H  + K G+   +  CN+L++ Y +I  L  AR++F EMPQK+ VS++ LI+G+ +  
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFV 211
           + +EA  LF  +   G  P+ F   +AL A    G   I LG Q+HAF+ K   V ++ +
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280

Query: 212 ANALLDLYSKHDC---VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +N L+ +YS  DC   + +A ++F E+   + V++N +I+ Y        + KLF  +Q 
Sbjct: 281 SNVLMSMYS--DCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338

Query: 269 TRFD----RSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
              +     +++   +L++   +  D  L +  Q+ T+   +  + ++ V ++LV+ +A+
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G  + AK IF  +   + V    ++    ++   EEA  +F EM +  +  +  +   +
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVL 457

Query: 383 LRASAELASLSLGK----QLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAIQTFKEM 437
           L    E ++L  GK    ++H+++ RSG +    S G+AL++MY K  ++ +A   F+ M
Sbjct: 458 LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 517

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P ++ VSWN++IS    N   +  +  F  M ++G  P + S++S LS+CS  G +  G 
Sbjct: 518 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           Q  +    K+ L        +++ +   +   +E +K+  QMP E D++ W+S I +
Sbjct: 578 Q-IHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 10/173 (5%)

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           +SL     LH  + ++GF  +VF  + L+++Y + G+L  A + F EMP++N+VSW+ LI
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL--IEEGLQYFNSMTQKY 507
           S   QN         F+ ++ SG  P+  ++ S L AC  CG   I+ G+Q    +    
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFIC--- 270

Query: 508 KLRPKKEHYASMVDILCRSGC---FDEAEKLMAQMPFEPDEIMWSSVIN-SCR 556
           KL    +   S V +   S C    D+A ++  ++ F  + + W+S+I+  CR
Sbjct: 271 KLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFR-NSVTWNSIISVYCR 322



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G +  A   F  M  R   SW  +I GY++    ++A K+F  M+
Sbjct: 795 DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 854

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
             G S PD+VTF  +LS CS     +E
Sbjct: 855 QHGQS-PDHVTFVGVLSACSHVGLVDE 880


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 425/749 (56%), Gaps = 9/749 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+   +  L++ Y   G+++ +R  F+ +  +   +W  +I  Y     F EA   F  +
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 208

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD+ TF  +L  C    T  +  ++H    K G+   + +  SL+  Y +   
Sbjct: 209 LLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +AR +F +MP +D  S+NA+I+G  + G   +A+ +  EM+  G K +  T  + L  
Sbjct: 266 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 325

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L DI+    +H +V+K     ++FV+NAL+++Y+K   + +ARK F +M   D VS+
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  Y  N+    +   F ++Q   F        +L S+VA   D +  R +H   + 
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMR 445

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
              + E V + N++VDMYAK G  + A ++F  +     + W  +I+ Y Q G   EA+ 
Sbjct: 446 RGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIE 505

Query: 363 LF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++  +E C+  I  +Q T+ SIL A A + +L  G ++H  VI++    +VF  + L+D+
Sbjct: 506 VYKMMEECK-EIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 564

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G L DA+  F ++P+ + V+WNA+IS    +G A+ TLK F +M+  G +PD V+ 
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +S+LSACSH G +EEG   F  M Q+Y ++P  +HY  MVD+L R+G  + A   +  MP
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 683

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +PD  +W +++ +CRIH N+E  K A+D+LF+++  ++   YV +SNIYA  G+WE V 
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS-KNVGYYVLLSNIYANVGKWEGVD 742

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V+   RERG++K   +S +E+  KV VF   ++ HP+  EI  ++  L  +MK  GY P
Sbjct: 743 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 802

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D S  L D +E+ K   L  HSERLAIAF +I+TP  SPI + KNLR C DCH A K IS
Sbjct: 803 DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFIS 862

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +IT REI VRDS+RFHHFKDG CSC D+W
Sbjct: 863 RITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 258/521 (49%), Gaps = 8/521 (1%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA ++  G    + I   LV+ Y  +  + L+R  F ++PQKD  ++N++I+ +   G 
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 155 NEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             EAI  F ++  +   +P  +TF   L A   L D   GR++H +  K  F  NVFVA 
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 254

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+ +YS+      AR LF +MP  D  S+N MI+    N    ++L +  E++      
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +     ++L V     D+     IH   I      ++ V+N+L++MYAK G  E+A++ F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +     V W ++I+AY Q  +   A   F++M       D  T  S+    A+     
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 394 LGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             + +H F++R G+ M +V  G+A++DMYAK G L  A + F+ +P ++++SWN LI+  
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494

Query: 453 AQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
           AQNG A   ++ ++ M +     P+  + +S+L A +H G +++G++  +    K  L  
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMK-IHGRVIKTNLHL 553

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                  ++D+  + G   +A  L  Q+P E   + W+++I+   IH + E   K   ++
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLKLFGEM 612

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
                  D   +V++ +  + +G  E      + M+E G++
Sbjct: 613 LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 653



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 25/216 (11%)

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             K LH+ ++ +G + ++F  + L+++YA  G +  +  TF ++P++++ +WN++ISA  
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 454 QNGDAQATLKSF-EDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQYFNSMT 504
            NG     +  F + ++ S  +PD  +   VL AC         HC   + G Q+ N   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQW-NVFV 252

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
                       AS++ +  R G    A  L   MPF  D   W+++I+    + N   A
Sbjct: 253 A-----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN---A 297

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +A D L +M        +V + +I  V  Q   +S
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 425/749 (56%), Gaps = 9/749 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+   +  L++ Y   G+++ +R  F+ +  +   +W  +I  Y     F EA   F  +
Sbjct: 149 QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQL 208

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD+ TF  +L  C    T  +  ++H    K G+   + +  SL+  Y +   
Sbjct: 209 LLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +AR +F +MP +D  S+NA+I+G  + G   +A+ +  EM+  G K +  T  + L  
Sbjct: 266 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 325

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L DI+    +H +V+K     ++FV+NAL+++Y+K   + +ARK F +M   D VS+
Sbjct: 326 CPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSW 385

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  Y  N+    +   F ++Q   F        +L S+VA   D +  R +H   + 
Sbjct: 386 NSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMR 445

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
              + E V + N++VDMYAK G  + A ++F  +     + W  +I+ Y Q G   EA+ 
Sbjct: 446 RGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIE 505

Query: 363 LF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++  +E C+  I  +Q T+ SIL A A + +L  G ++H  VI++    +VF  + L+D+
Sbjct: 506 VYKMMEECK-EIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDV 564

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G L DA+  F ++P+ + V+WNA+IS    +G A+ TLK F +M+  G +PD V+ 
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +S+LSACSH G +EEG   F  M Q+Y ++P  +HY  MVD+L R+G  + A   +  MP
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP 683

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +PD  +W +++ +CRIH N+E  K A+D+LF+++  ++   YV +SNIYA  G+WE V 
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS-KNVGYYVLLSNIYANVGKWEGVD 742

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V+   RERG++K   +S +E+  KV VF   ++ HP+  EI  ++  L  +MK  GY P
Sbjct: 743 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 802

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D S  L D +E+ K   L  HSERLAIAF +I+TP  SPI + KNLR C DCH A K IS
Sbjct: 803 DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFIS 862

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +IT REI VRDS+RFHHFKDG CSC D+W
Sbjct: 863 RITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 257/521 (49%), Gaps = 8/521 (1%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA ++  G    + I   LV+ Y  +  + L+R  F ++PQKD  ++N++I+ +   G 
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 155 NEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             EAI  F ++  +   +P  +TF   L A   L D   GR++H +  K  F  NVFVA 
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAA 254

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+ +YS+      AR LF +MP  D  S+N MI+    N    ++L +  E++      
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +     ++L V     D+     IH   I      ++ V+N+L++MYAK G  E+A++ F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +     V W ++I+AY Q  +   A   F++M       D  T  S+    A+     
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 394 LGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             + +H F++R G+ M +V  G+A++DMYAK G L  A + F+ +  ++++SWN LI+  
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494

Query: 453 AQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
           AQNG A   ++ ++ M +     P+  + +S+L A +H G +++G++  +    K  L  
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMR-IHGRVIKTNLHL 553

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                  ++D+  + G   +A  L  Q+P E   + W+++I+   IH + E   K   ++
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCHGIHGHAEKTLKLFGEM 612

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
                  D   +V++ +  + +G  E      + M+E G++
Sbjct: 613 LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 653



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 25/216 (11%)

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             K LH+ ++ +G + ++F  + L+++YA  G +  +  TF ++P++++ +WN++ISA  
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 454 QNGDAQATLKSF-EDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQYFNSMT 504
            NG     +  F + ++ S  +PD  +   VL AC         HC   + G Q+ N   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQW-NVFV 252

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
                       AS++ +  R G    A  L   MPF  D   W+++I+    + N   A
Sbjct: 253 A-----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN---A 297

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +A D L +M        +V + +I  V  Q   +S
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIS 333


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/741 (36%), Positives = 431/741 (58%), Gaps = 3/741 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LIS     GN+  A  +F+ M +R  +SW  +   Y+Q     E+F++F  MR     
Sbjct: 289  NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH-D 347

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            + +  T +TLLS     D       +H  ++K G++S++ +CN+L+  Y        A  
Sbjct: 348  EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VFK+MP KD +S+N+L+  F  +G + +A+ L   M   G   +  TF +AL+A      
Sbjct: 408  VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
               GR +H  VV +    N  + NAL+ +Y K   + E+R++  +MP  D V++N +I  
Sbjct: 468  FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIVTTAIS 308
            YA +E   ++L  F+ ++      +     ++LS      DL + G+ +H   +     S
Sbjct: 528  YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 587

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +  V NSL+ MYAKCG    ++++F  L + + + W AM++A    G+ EE L L  +M 
Sbjct: 588  DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 647

Query: 369  RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
               +S DQ +F+  L A+A+LA L  G+QLH   ++ GF  + F  +A  DMY+K G + 
Sbjct: 648  SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 707

Query: 429  DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            + ++       R++ SWN LISA  ++G  +    +F +M++ G +P  V+ +S+L+ACS
Sbjct: 708  EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 767

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H GL+++GL Y++ + + + L P  EH   ++D+L RSG   EAE  +++MP +P++++W
Sbjct: 768  HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 827

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             S++ SC+IH NL+  +KAA+ L K+E   D + YV  SN++A  G+WE V  V+K M  
Sbjct: 828  RSLLASCKIHGNLDRGRKAAENLSKLEP-EDDSVYVLSSNMFATTGRWEDVENVRKQMGF 886

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            + ++K  A SWV+LK KV  F   D  HPQT EI  K+E++ + +K+ GY  DTS AL D
Sbjct: 887  KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD 946

Query: 669  EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
             DEE K  +L  HSERLA+A+AL++TPEGS + + KNLR C+DCH+  K +S++ GR I 
Sbjct: 947  TDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIV 1006

Query: 729  VRDSSRFHHFKDGFCSCRDFW 749
            +RD  RFHHF+ G CSC+D+W
Sbjct: 1007 LRDQYRFHHFERGLCSCKDYW 1027



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 242/494 (48%), Gaps = 28/494 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + + TN LI+ Y K G +  AR LF+ M  R  VSW  ++ G  +   + E  + F  M 
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM- 164

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            D G  P     A+L++ C    +   E +QVH  + K G  S + +  +++  Y     
Sbjct: 165 CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGL 224

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  +R+VF+EMP ++ VS+ +L+ G++ +G  EE I ++                     
Sbjct: 225 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY--------------------- 263

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                D +LGRQ+   VVK+     + V N+L+ +      V  A  +F +M E D +S+
Sbjct: 264 ----KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 319

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +   YA N   +ES ++F  ++    + +    STLLSV+ +    + GR IH   + 
Sbjct: 320 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 379

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S V V N+L+ MYA  GR  EA  +F  +     + W ++++++V  G   +AL L
Sbjct: 380 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 439

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
              M  +  S +  TF S L A         G+ LH  V+ SG   N   G+AL+ MY K
Sbjct: 440 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 499

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G + ++ +   +MP R++V+WNALI   A++ D    L +F+ M   G   + ++++SV
Sbjct: 500 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 559

Query: 484 LSACSHCG-LIEEG 496
           LSAC   G L+E G
Sbjct: 560 LSACLLPGDLLERG 573



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 233/461 (50%), Gaps = 28/461 (6%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VHA  +K      ++  N+L++ Y K   +  AR +F  MP ++ VS+N +++G  + GL
Sbjct: 94  VHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGL 153

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             E ++ F +M  LG KPS F  A+ ++A G   +    G QVH FV K+  + +V+V+ 
Sbjct: 154 YLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST 213

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           A+L LY  +  V  +RK+F EMP+ + VS+  ++  Y+   + +E + +++         
Sbjct: 214 AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK--------- 264

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
                           D  +GRQI  Q + +   S++ V NSL+ M    G  + A  IF
Sbjct: 265 ----------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 308

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +S   T+ W ++ +AY Q G++EE+  +F  M R +   +  T +++L     +    
Sbjct: 309 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 368

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+ +H  V++ GF S V   + LL MYA +G   +A   FK+MP ++++SWN+L+++  
Sbjct: 369 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 428

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
            +G +   L     M+ SG   + V+  S L+AC      E+G +  + +     L   +
Sbjct: 429 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQ 487

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               ++V +  + G   E+ +++ QMP   D + W+++I  
Sbjct: 488 IIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG 527



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 31/374 (8%)

Query: 185 VGLADIAL---GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           +G + I +   GR VHA  VK     +V   N L+++Y+K   V  AR LF  MP  + V
Sbjct: 80  IGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEV 139

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQ 300
           S+N M++       Y E ++ FR++       S F  ++L++       + + G Q+H  
Sbjct: 140 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 199

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              +  +S+V V+ +++ +Y   G    ++++F  +   + V WT+++  Y  KG  EE 
Sbjct: 200 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 259

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++++          D+                SLG+Q+   V++SG  S +   ++L+ M
Sbjct: 260 IDIY---------KDE----------------SLGRQIIGQVVKSGLESKLAVENSLISM 294

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
               G++  A   F +M ER+ +SWN++ +A AQNG  + + + F  M +   + +S ++
Sbjct: 295 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 354

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            ++LS   H    + G +  + +  K           +++ +   +G   EA  +  QMP
Sbjct: 355 STLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413

Query: 541 FEPDEIMWSSVINS 554
            + D I W+S++ S
Sbjct: 414 TK-DLISWNSLMAS 426


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/748 (37%), Positives = 444/748 (59%), Gaps = 4/748 (0%)

Query: 4    QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +++VS  N LIS +    ++  A  +F+ M +   +SW  +I  Y+     RE+ + F  
Sbjct: 979  EDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHW 1038

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR    ++ +  T ++LLS CS  D       +H  ++K G +S + ICN+L+  Y +  
Sbjct: 1039 MRHLH-NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAG 1097

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
              + A  VF+ M ++D +S+N+++  + ++G   + +K+  E+  +G   +  TFA+AL+
Sbjct: 1098 RSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALA 1157

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A      +   + VHA ++   F + + V NAL+ +Y K   ++EA+K+   MP+ D V+
Sbjct: 1158 ACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVT 1217

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQT 301
            +N +I  +A NE+  E++K ++ ++      +     ++L   +   DL + G  IH   
Sbjct: 1218 WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHI 1277

Query: 302  IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            ++T   S+  V NSL+ MYAKCG    +  IF  L + S + W AM++A    G  EEAL
Sbjct: 1278 VLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEAL 1337

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             +F EM    ++ DQ +F+  L A+A LA L  G+QLH  VI+ GF S++   +A +DMY
Sbjct: 1338 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 1397

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
             K G + D ++   +   R+ +SWN LISA A++G  Q   ++F +M++ G +PD V+ +
Sbjct: 1398 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 1457

Query: 482  SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            S+LSAC+H GL++EGL Y++SMT+++ + P  EH   ++D+L RSG    AE  + +MP 
Sbjct: 1458 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 1517

Query: 542  EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             P+++ W S++ +CRIH NLE A+K A+ L +++   D+A YV  SN+ A +G+WE V  
Sbjct: 1518 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSA-YVLYSNVCATSGKWEDVEN 1576

Query: 602  VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            ++K M    ++K  A SWV+LK KVH F   ++ HPQ + I  K+  LM+  K+ GY PD
Sbjct: 1577 LRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPD 1636

Query: 662  TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            TS ALHD DEE K  +L  HSERLA+AF LINTPE S + + KNLR C DCH+  K +S 
Sbjct: 1637 TSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSG 1696

Query: 722  ITGREITVRDSSRFHHFKDGFCSCRDFW 749
            I GR+I +RD  RFHHF  G CSC D+W
Sbjct: 1697 IVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 195/576 (33%), Positives = 310/576 (53%), Gaps = 6/576 (1%)

Query: 51  NQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII 110
            +  EA KL     T    DP    +  +L  C +     +   +H  +I  G+ S L +
Sbjct: 12  GRLAEALKLLSSNPTR--LDPS--LYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHL 67

Query: 111 CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF 170
              L+  Y K+  +  AR VF  MP++  VS+ A+++G+++ G  E+A  LF +M+H G 
Sbjct: 68  NTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV 127

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           K + FT+ +AL A   L  + +G QV   + K  FVEN+FV +AL+D +SK   + +A  
Sbjct: 128 KANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASY 187

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           LFG M E D VS+N MI  YA      +S  +FR +         +   ++L   A    
Sbjct: 188 LFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGG 247

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L I  QIH         S   V   L++ YAK G    AK++   +        TA+I+ 
Sbjct: 248 LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 307

Query: 351 YVQKGNLE-EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           Y  +G    +AL+LF EM + NI  D     S+L   A LAS +LG Q+H+F ++     
Sbjct: 308 YAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSY 367

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +V  G+AL+DMYAKSG ++DA + F EM E+N++SW +LIS  A++G     +  ++ M 
Sbjct: 368 DVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKME 427

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
             G++P+ V+ LS+L ACSH GL  EG + FN+M  KY ++P+ EHY+ MVD+  R G  
Sbjct: 428 SKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLL 487

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           +EA  L+ ++  + +  +W +++ +  I+  +   K+AA  LF M+   ++  YV +++I
Sbjct: 488 EEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP-ENSVNYVVLASI 546

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           Y+ AG W+   +++K M ER  +K   YS+ +   K
Sbjct: 547 YSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 264/487 (54%), Gaps = 2/487 (0%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            N     TN LI+ Y K GN+  AR +F+ M  R   SW+ ++ GY +   + EA  LF  
Sbjct: 776  NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 835

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M   G  +P+    A+L++ CS     A+E  QVH  ++K G    + +  +LV  Y  I
Sbjct: 836  MWGLG-VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSI 894

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
              +  A+++F+EMP  + VS+ +L+ G++  G   E + ++  M+  G   +  TFA   
Sbjct: 895  GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT 954

Query: 182  SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            S+   L D  LG QV   +++  F ++V VAN+L+ ++S    V EA  +F  M E D +
Sbjct: 955  SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 1014

Query: 242  SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            S+N MI+ YA +   +ESL+ F  ++    + +    S+LLSV ++  +L+ GR IH   
Sbjct: 1015 SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 1074

Query: 302  IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            +     S V + N+L+ +Y++ GR E+A+ +F  ++    + W +M++ YVQ G   + L
Sbjct: 1075 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 1134

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             +  E+ +     +  TFAS L A +    L   K +H+ +I +GF   +  G+AL+ MY
Sbjct: 1135 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 1194

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
             K G + +A +  + MP+ + V+WNALI   A+N +    +K+++ + + G   + ++++
Sbjct: 1195 GKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 1254

Query: 482  SVLSACS 488
            SVL ACS
Sbjct: 1255 SVLGACS 1261



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 246/487 (50%), Gaps = 25/487 (5%)

Query: 80   LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
            L G SE  +      +HA  I    N  +   N+L++ Y K   ++ AR VF EM  ++ 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 140  VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA-LGRQVHA 198
             S++ +++G+ + GL EEA+ LF +M  LG +P+ F  A+ ++A      +A  G QVH 
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 199  FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
            FVVKT  + +V+V  AL+  Y     V  A+KLF EMP+ + VS+  ++  Y+ +    E
Sbjct: 871  FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930

Query: 259  SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
             L +++ ++      +Q  F+T+ S      D  +G Q+    I       V VANSL+ 
Sbjct: 931  VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990

Query: 319  MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
            M++     EEA  +F +++    + W AMISAY   G   E+L  F  M   +   +  T
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050

Query: 379  FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             +S+L   + + +L  G+ +H  V++ G  SNV   + LL +Y+++G  +DA   F+ M 
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110

Query: 439  ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---------- 488
            ER+++SWN++++   Q+G     LK   +++Q G   + V+  S L+ACS          
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 1170

Query: 489  -HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
             H  +I  G   F  +              ++V +  + G   EA+K++  MP +PD + 
Sbjct: 1171 VHALIIVAGFHDFLIVGN------------ALVTMYGKLGMMMEAKKVLQTMP-QPDRVT 1217

Query: 548  WSSVINS 554
            W+++I  
Sbjct: 1218 WNALIGG 1224



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 4/448 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  YVK G++  AR +F+ M +R+ VSWT ++ GYSQ  +F +AF LF DMR   G   
Sbjct: 71  LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR-HCGVKA 129

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T+ + L  C+     +  IQV   I K  +   L + ++LVD + K   ++ A  +F
Sbjct: 130 NQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLF 189

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M ++D VS+NA+I G+A +G  +++  +F  M   G  P  +T  + L A      + 
Sbjct: 190 GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 249

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +  Q+H  + +  +     V   L++ Y+K+  +  A+ L   M + D  S   +IT YA
Sbjct: 250 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 309

Query: 252 WNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
               Y  ++L LF+E+             ++L++ AN     +G QIH   +      +V
Sbjct: 310 HEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDV 369

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + N+L+DMYAK G  E+AK  F  +   + + WT++IS Y + G    A++L+ +M   
Sbjct: 370 AMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESK 429

Query: 371 NISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
               +  TF S+L A +     + G +  ++ V +          S ++D++A+ G L++
Sbjct: 430 GFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEE 489

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQNG 456
           A     ++  + N   W A++ A +  G
Sbjct: 490 AYNLLCKIDIKHNASLWGAILGASSIYG 517



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 36/439 (8%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    + L+  + K G +  A  LF +M++R  VSW  +IGGY+ +    ++F +F  M
Sbjct: 164 ENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 223

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              GG  PD  T  ++L   +E        Q+H  I + GY S  I+   L+++Y K   
Sbjct: 224 -LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 282

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGL-NEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           L  A+ + K M +KD  S  ALITG+A EG+ + +A+ LF EM  +     D    + L+
Sbjct: 283 LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLN 342

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               LA  ALG Q+HAF +K     +V + NAL+D+Y+K   + +A++ F EM E + +S
Sbjct: 343 ICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 402

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I+ YA +     ++ L+++++   F  +   F +LL                + T 
Sbjct: 403 WTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFAC-------------SHTG 449

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
           +T    E    N++V+ Y    R E                ++ M+  + ++G LEEA N
Sbjct: 450 LTAEGCE--CFNNMVNKYNIKPRAEH---------------YSCMVDLFARQGLLEEAYN 492

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L   +C+ +I  + + + +IL AS+    +SLGK+  S +       N  +   L  +Y+
Sbjct: 493 L---LCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ-PENSVNYVVLASIYS 548

Query: 423 KSGSLKDAIQTFKEMPERN 441
            +G   DA +  K M ER+
Sbjct: 549 AAGLWDDAWKIRKLMEERS 567



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 34/194 (17%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+ +    N LI  Y KSG +  A+  F+ M ++  +SWT LI GY++      A  L+ 
Sbjct: 365 PSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYK 424

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M +  G  P+ VTF +LL  CS      E  +                 N++V+ Y  I
Sbjct: 425 KMESK-GFKPNDVTFLSLLFACSHTGLTAEGCECF---------------NNMVNKY-NI 467

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
           +            P+ +   ++ ++  FA++GL EEA  L  ++     K +   + A L
Sbjct: 468 K------------PRAE--HYSCMVDLFARQGLLEEAYNLLCKID---IKHNASLWGAIL 510

Query: 182 SAGVGLADIALGRQ 195
            A      ++LG++
Sbjct: 511 GASSIYGYMSLGKE 524


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/740 (36%), Positives = 434/740 (58%), Gaps = 2/740 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ Y K G LA+AR LF+ M +R  VS+  L+  ++Q+  F  A  LF  +R +G  
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +V   T+L      D A     VH+   K G++    + + L+D+Y     +  A  
Sbjct: 160 VNQFV-LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  + +KD+V + A+++ +++    E A ++F +M+  G KP+ F   + L A V L  
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+ +H   +KT       V  ALLD+Y+K   + +AR  F  +P  D +  + MI+ 
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISR 338

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA + Q +++ +LF  L  +    +++  S++L    N + L  G+QIH   I     S+
Sbjct: 339 YAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESD 398

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V N+L+D YAKC   + + +IF++L   + V W  ++  + Q G  EEAL++F EM  
Sbjct: 399 LFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQA 458

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +   Q T++S+LRA A  AS+    Q+H  + +S F ++   G++L+D YAK G ++D
Sbjct: 459 AQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRD 518

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A++ F+ + ER+I+SWNA+IS  A +G A   L+ F+ M +S  + + ++ +++LS CS 
Sbjct: 519 ALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSS 578

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+  GL  F+SM   + ++P  EHY  +V +L R+G  ++A + +  +P  P  ++W 
Sbjct: 579 TGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWR 638

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           ++++SC IHKN+   + +A+++ ++E  +D   YV +SN+YA AG  + V+ ++K+MR  
Sbjct: 639 ALLSSCIIHKNVALGRFSAEKILEIEP-QDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 697

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GVRKV   SWVE+K ++H F+     HP    I   +E L  +  +EGY PD +  LHD 
Sbjct: 698 GVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDV 757

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K   L  HSERLA+A+ L+ TP G PI ++KNLR+C DCH A  +ISKI  REI V
Sbjct: 758 DKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD +RFHHF+DG CSC D+W
Sbjct: 818 RDINRFHHFEDGKCSCGDYW 837



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 254/525 (48%), Gaps = 4/525 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIIC-NSLVDSYCKIRCLDLARR 129
           D    A  L GC     A     VH  +++  G   + + C N L++ Y K+  L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP+++ VSF  L+   A+ G  E A  LF  ++  G + + F     L   + +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   VH+   K     N FV + L+D YS    V +A  +F  +   D V +  M++C
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y+ N+  + + ++F +++ +    + F  +++L        + +G+ IH   I T   +E
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V  +L+DMYAKCG  ++A+  F  + +   +  + MIS Y Q    E+A  LF+ + R
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +++  ++ + +S+L+A   +  L  GKQ+H+  I+ G  S++F G+AL+D YAK   +  
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           +++ F  + + N VSWN ++   +Q+G  +  L  F +M  +      V+  SVL AC+ 
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I    Q   S+ +K           S++D   + G   +A K+   +  E D I W+
Sbjct: 478 TASIRHAGQIHCSI-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWN 535

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++I+   +H     A +  D++ K     +   +VA+ ++ +  G
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +TV  N LI  Y K G +  A ++F  +++R  +SW  +I GY+   Q  +A +LF D
Sbjct: 497 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF-D 555

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
                  + + +TF  LLS CS     N 
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNH 584


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/741 (36%), Positives = 431/741 (58%), Gaps = 3/741 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS     GN+  A  +F+ M +R  +SW  +   Y+Q     E+F++F  MR     
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH-D 257

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + +  T +TLLS     D       +H  ++K G++S++ +CN+L+  Y        A  
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VFK+MP KD +S+N+L+  F  +G + +A+ L   M   G   +  TF +AL+A      
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              GR +H  VV +    N  + NAL+ +Y K   + E+R++  +MP  D V++N +I  
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIVTTAIS 308
           YA +E   ++L  F+ ++      +     ++LS      DL + G+ +H   +     S
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V NSL+ MYAKCG    ++++F  L + + + W AM++A    G+ EE L L  +M 
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +S DQ +F+  L A+A+LA L  G+QLH   ++ GF  + F  +A  DMY+K G + 
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           + ++       R++ SWN LISA  ++G  +    +F +M++ G +P  V+ +S+L+ACS
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+++GL Y++ + + + L P  EH   ++D+L RSG   EAE  +++MP +P++++W
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            S++ SC+IH NL+  +KAA+ L K+E   D + YV  SN++A  G+WE V  V+K M  
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEP-EDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           + ++K  A SWV+LK KV  F   D  HPQT EI  K+E++ + +K+ GY  DTS AL D
Sbjct: 797 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD 856

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            DEE K  +L  HSERLA+A+AL++TPEGS + + KNLR C+DCH+  K +S++ GR I 
Sbjct: 857 TDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIV 916

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           +RD  RFHHF+ G CSC+D+W
Sbjct: 917 LRDQYRFHHFERGLCSCKDYW 937



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 246/483 (50%), Gaps = 3/483 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  AR LF+ M  R  VSW  ++ G  +   + E  + F  M  D G  P    
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFV 60

Query: 76  FATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            A+L++ C    +   E +QVH  + K G  S + +  +++  Y     +  +R+VF+EM
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P ++ VS+ +L+ G++ +G  EE I ++  M+  G   ++ + +  +S+   L D +LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+   VVK+     + V N+L+ +      V  A  +F +M E D +S+N +   YA N 
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             +ES ++F  ++    + +    STLLSV+ +    + GR IH   +     S V V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +L+ MYA  GR  EA  +F  +     + W ++++++V  G   +AL L   M  +  S 
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  TF S L A         G+ LH  V+ SG   N   G+AL+ MY K G + ++ +  
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG-LI 493
            +MP R++V+WNALI   A++ D    L +F+ M   G   + ++++SVLSAC   G L+
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 494 EEG 496
           E G
Sbjct: 481 ERG 483



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 4/359 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N L+S Y K G ++ +R +   M  R  V+W  LIGGY++     +A   F  MR
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455

Query: 65  TDGGSDPDYVTFATLLSGCSEP-DTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            +G S  +Y+T  ++LS C  P D       +HA I+  G+ S   + NSL+  Y K   
Sbjct: 456 VEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  ++ +F  +  ++ +++NA++   A  G  EE +KL  +M+  G     F+F+  LSA
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LA +  G+Q+H   VK  F  + F+ NA  D+YSK   + E  K+          S+
Sbjct: 575 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 634

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N++I+    +  ++E    F E+           F +LL+  ++   +  G   +     
Sbjct: 635 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 694

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
              +   ++    ++D+  + GR  EA+   + +    + + W +++++    GNL+  
Sbjct: 695 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 753



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 168/338 (49%), Gaps = 3/338 (0%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y+K   V  AR LF  MP  + VS+N M++       Y E ++ FR++       S F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 278 FSTLLSVVANKLDL-QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++L++       + + G Q+H     +  +S+V V+ +++ +Y   G    ++++F  +
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
              + V WT+++  Y  KG  EE ++++  M    +  ++ + + ++ +   L   SLG+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+   V++SG  S +   ++L+ M    G++  A   F +M ER+ +SWN++ +A AQNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
             + + + F  M +   + +S ++ ++LS   H    + G +  + +  K          
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVC 299

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +++ +   +G   EA  +  QMP + D I W+S++ S
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/738 (35%), Positives = 422/738 (57%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + K G++  A  +F  + D+    +  ++ GY++ +    A      MR D    P
Sbjct: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD-VKP 145

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL  C +        ++H  +I   + + +     +V+ Y K R +D A ++F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP++D VS+N +I GF++ G  ++A++L + MQ  G +P   T    L A   +  + 
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G+ +H + ++  F + V ++ AL D+YSK   V  AR +F  M +   VS+N M+  Y 
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N + ++++ +F ++     D +       L   A+  DL+ G+ +H         S++ 
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY+KC R + A +IF NL+  + V W AMI  Y Q G + EALN F EM    
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T  S++ A AEL+     K +H  +IRS    N+F  +AL+DMY+K G++  A 
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMAR 505

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  + +R++++WNA+I     +G  +A L  F+ M +   +P+ ++ LSV+SACSH G
Sbjct: 506 KLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG 565

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EGL++F SM Q Y L P  +HY +MVD+L R+G   EA   +  MP  P   ++ ++
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAM 625

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C+IHKN+E  +KAA +LF++    +   +V ++NIYA   +W  V++V+K M ++G+
Sbjct: 626 LGACKIHKNIEVGEKAAKKLFELNP-DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    S VEL+++VH F +    HPQ+  I   +E L+ E+K  GY PDT+  L D ++
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVED 743

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           +++ + L  HSE+LAIAF L+NT  G+ I V KNLR C DCH A K IS +TGREI VRD
Sbjct: 744 DVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRD 803

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC D+W
Sbjct: 804 MQRFHHFKNGICSCGDYW 821



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 224/453 (49%), Gaps = 9/453 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  +   +++ Y K   +  A ++F+ M +R  VSW  +I G+SQ    ++A +L + M+
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD +T  T+L   ++         +H   I+ G+  ++ I  +L D Y K   +
Sbjct: 241 -DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV 299

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR +F  M QK  VS+N+++ G+ + G  E+AI +F +M   G  P+  T   AL A 
Sbjct: 300 ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHAC 359

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+  G+ VH FV + N   ++ V N+L+ +YSK   V  A  +F  +     VS+N
Sbjct: 360 ADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWN 419

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---IHTQT 301
            MI  YA N +  E+L  F E++        F   T++SV+    +L + R    IH   
Sbjct: 420 AMILGYAQNGRVSEALNCFSEMKSLGMKPDSF---TMVSVIPALAELSVTRHAKWIHGLI 476

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I +     + V  +LVDMY+KCG    A+++F  +S    + W AMI  Y   G    AL
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDM 420
           +LF +M +  +  +  T+ S++ A +    +  G +   S     G   ++    A++D+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
             ++G +K+A    + MP    I  + A++ AC
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAMLGAC 629



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 157/303 (51%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+   V+K            L+ L+SK+  + EA ++F  + +     Y+ M+  YA N
Sbjct: 66  HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKN 125

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              + +L     +++       + F+ LL V  +  DL+ G++IH Q I  +  + V   
Sbjct: 126 SSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAM 185

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
             +V+MYAKC + ++A ++F  +     V W  +I+ + Q G  ++AL L + M      
Sbjct: 186 TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR 245

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T  ++L A+A++  L +GK +H + IR+GF   V   +AL DMY+K GS++ A   
Sbjct: 246 PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M ++ +VSWN+++    QNG+ +  +  FE M++ G  P  V+++  L AC+  G +
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365

Query: 494 EEG 496
           E G
Sbjct: 366 ERG 368



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N   T  L+  Y K G +  AR+LF+ + DR  ++W  +I GY      R A  LF  
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M+  G  +P+ +T+ +++S CS     +E
Sbjct: 542 MKK-GAVEPNDITYLSVISACSHSGLVDE 569


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/754 (36%), Positives = 443/754 (58%), Gaps = 13/754 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTIL----IGGYSQKNQFREAF 57
           PN+ T+     ISG     + A   + F +  D ++VS  I     +  Y    Q+    
Sbjct: 244 PNEITLRLLARISG---DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300

Query: 58  KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           K F DM  +   + D VTF  +L+   + D+     QVH   +K G + +L + NSL++ 
Sbjct: 301 KCFADM-VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YCK+R    AR VF  M ++D +S+N++I G A+ GL  EA+ LF+++   G KP  +T 
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419

Query: 178 AAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            + L A   L + ++L +QVH   +K N V + FV+ AL+D YS++ C+ EA  LF E  
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERH 478

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGR 295
             D V++N M+  Y  +    ++LKLF  L   + +RS  F  +T+         +  G+
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   I +    ++ V++ ++DMY KCG    A+  F ++     V WT MIS  ++ G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             E A ++F +M    +  D+ T A++ +AS+ L +L  G+Q+H+  ++    ++ F G+
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L+DMYAK GS+ DA   FK +   NI +WNA++   AQ+G+ + TL+ F+ M   G +P
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D V+ + VLSACSH GL+ E  ++  SM   Y ++P+ EHY+ + D L R+G   +AE L
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  M  E    M+ +++ +CR+  + E  K+ A +L ++E L D++ YV +SN+YA A +
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL-DSSAYVLLSNMYAAASK 836

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ +   +  M+   V+K   +SW+E+K+K+H+F  +D  + QT  I RK++++++++K+
Sbjct: 837 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQ 896

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
           EGY P+T   L D +EE K  +L YHSE+LA+AF L++TP  +PI V+KNLR C DCH A
Sbjct: 897 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 956

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +K I+K+  REI +RD++RFH FKDG CSC D+W
Sbjct: 957 MKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 258/560 (46%), Gaps = 58/560 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQ-----FREAFKLFVDMR 64
           N LIS Y K G+L  AR +F+ M DR  VSW  ++  Y+Q ++      ++AF LF  +R
Sbjct: 78  NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D       +T + +L  C            H    K G +    +  +LV+ Y K   +
Sbjct: 138 QDVVY-TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
              + +F+EMP +D V +N ++  + + G  EEAI L       G  P++ T    L A 
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--RLLAR 254

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           +   D   G QV +F            AN        +D    +  +F           N
Sbjct: 255 ISGDDSDAG-QVKSF------------ANG-------NDASSVSEIIF----------RN 284

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             ++ Y  + QY   LK F ++  +  +  Q  F  +L+       L +G+Q+H   +  
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V+NSL++MY K  +F  A+ +F N+S    + W ++I+   Q G   EA+ LF
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404

Query: 365 IEMCRANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           +++ R  +  DQ T  S+L+A++ L   LSL KQ+H   I+   +S+ F  +AL+D Y++
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           +  +K+A   F E    ++V+WNA+++   Q+ D   TLK F  M + G + D  +L +V
Sbjct: 465 NRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL----MAQM 539
              C     I +G Q        Y ++   +     +D+   SG  D   K      AQ 
Sbjct: 524 FKTCGFLFAINQGKQ-----VHAYAIKSGYD-----LDLWVSSGILDMYVKCGDMSAAQF 573

Query: 540 PFE----PDEIMWSSVINSC 555
            F+    PD++ W+++I+ C
Sbjct: 574 AFDSIPVPDDVAWTTMISGC 593



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 47/466 (10%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK---- 151
           HA I+ F  N    + N+L+  Y K   L  ARRVF +MP +D VS+N+++  +A+    
Sbjct: 62  HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121

Query: 152 --EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
             E + ++A  LF  ++      S  T +  L   +    +      H +  K     + 
Sbjct: 122 VVENI-QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FVA AL+++Y K   V E + LF EMP  D V +N+M+  Y      +E++ L      +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             + ++     L  +  +  D    +        ++ +SE+                   
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASS-VSEI------------------- 280

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF N            +S Y+  G     L  F +M  +++  DQ TF  +L  + ++
Sbjct: 281 --IFRNKG----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            SL+LG+Q+H   ++ G    +   ++L++MY K      A   F  M ER+++SWN++I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM-TQKYK 508
           +  AQNG     +  F  +++ G +PD  ++ SVL A S    + EGL     +     K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIK 445

Query: 509 LRPKKEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +    + + S  ++D   R+ C  EAE L  +  F  D + W++++
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMM 489



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 43/372 (11%)

Query: 188 ADIALGRQVHAFVVKTNFVENV--FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           +D+ LG+  HA ++   F EN   F+ N L+ +YSK   +  AR++F +MP+ D VS+N 
Sbjct: 53  SDLMLGKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110

Query: 246 MITCYAWN-----EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           ++  YA +     E  +++  LFR L+      S+   S +L +  +   +      H  
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                   +  VA +LV++Y K G+ +E K +F  + +   V W  M+ AY++ G  EEA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++L      + ++ ++ T   + R S + +      Q+ SF       +N    S++ ++
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSF-------ANGNDASSVSEI 280

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
             ++  L + + +                      G   A LK F DMV+S  + D V+ 
Sbjct: 281 IFRNKGLSEYLHS----------------------GQYSALLKCFADMVESDVECDQVTF 318

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + +L+       +  G Q  + M  K  L        S++++ C+   F  A  +   M 
Sbjct: 319 ILMLATAVKVDSLALG-QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377

Query: 541 FEPDEIMWSSVI 552
            E D I W+SVI
Sbjct: 378 -ERDLISWNSVI 388



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 10/192 (5%)

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           LR +   + L LGK  H+ ++        F  + L+ MY+K GSL  A + F +MP+R++
Sbjct: 46  LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105

Query: 443 VSWNALISACAQNGDA-----QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           VSWN++++A AQ+ +      Q     F  + Q       ++L  +L  C H G +    
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS- 164

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           + F+    K  L   +    ++V+I  + G   E + L  +MP+  D ++W+ ++   + 
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML---KA 220

Query: 558 HKNLEFAKKAAD 569
           +  + F ++A D
Sbjct: 221 YLEMGFKEEAID 232


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/814 (33%), Positives = 460/814 (56%), Gaps = 87/814 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N ++ N++++GY K G+L+ A ELF+ M  R   SW  L+ GY Q  +F +  + FV M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 65  TDGGSDPDYVTFATLLSGCS----------------------EPDTANELIQVHADIIKF 102
             G S P+  TF  ++  C                       +PD    L+ +    ++ 
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM---FVRC 186

Query: 103 GYNSI-----------LIIC-NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           GY               I C NS++  Y K+  +D A   F++M ++D VS+N +I   +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G   EA+ L VEM   G +    T+ ++L+A   L  +  G+Q+HA V+++    + +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           VA+AL++LY+K     EA+++F  + + + VS+ V+I      E + +S++LF +++   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               QF  +TL+S   N++DL +GRQ+H+  + +     + V+NSL+ +YAKCG  + A+
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNL-------------------------------EE 359
            +F+++S    V WT+MI+AY Q GN+                               E+
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEED 486

Query: 360 ALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
            L ++  M  + +++ D  T+ ++ R  A++ +  LG Q+    +++G + NV   +A +
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAI 546

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MY+K G + +A + F  +  +++VSWNA+I+  +Q+G  +   K+F+DM+  G +PD +
Sbjct: 547 TMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           S ++VLS CSH GL++EG  YF+ MT+ + + P  EH++ MVD+L R+G   EA+ L+ +
Sbjct: 607 SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MP +P   +W +++++C+IH N E A+ AA  +F+++   D+  Y+ ++ IY+ AG+ + 
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS-PDSGSYMLLAKIYSDAGKSDD 725

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            +QV+K MR++G++K   YSW+E+++KVHVF A+D  HPQ   IR K++ LM+++   GY
Sbjct: 726 SAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGY 785

Query: 659 KPDTSCALHDEDEEIKVESLK---YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
                         ++ ES +   +HSE+LA+AF +++ P   PI +MKNLR C DCH  
Sbjct: 786 --------------VRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTV 831

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IKLIS +T RE  +RD  RFHHFK G CSC D+W
Sbjct: 832 IKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 182/399 (45%), Gaps = 45/399 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +    + LI  Y K G+   A+ +FNS+ DR +VSWT+LIGG  Q   F ++ +LF
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 359

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR +  +  D    ATL+SGC          Q+H+  +K G+N  +++ NSL+  Y K
Sbjct: 360 NQMRAELMA-IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK 418

Query: 121 IRCLDL---------------------------------ARRVFKEMPQKDSVSFNALIT 147
             C DL                                 AR  F  M  ++++++NA++ 
Sbjct: 419 --CGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLG 476

Query: 148 GFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIA---LGRQVHAFVVKT 203
            + + G  E+ +K++  M       P   T+        G ADI    LG Q+    VK 
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR---GCADIGANKLGDQIIGHTVKA 533

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             + NV VANA + +YSK   + EA+KLF  +   D VS+N MIT Y+ +   K++ K F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAK 322
            ++           +  +LS  ++   +Q G+           IS  ++  + +VD+  +
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653

Query: 323 CGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            G   EAK++   +    T   W A++SA    GN E A
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 70/326 (21%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK------------------------ 330
           R +H + +     S V + N+L+  Y  CG   +A+                        
Sbjct: 24  RALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 83

Query: 331 --------EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA-TFAS 381
                   E+F  +       W  ++S Y Q     + L  F+ M R+  S   A TF  
Sbjct: 84  QGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCC 143

Query: 382 ILRASAELASLSLGKQLHSF-------------------VIRSGFMS------------N 410
           ++++   L    L  QL                       +R G++              
Sbjct: 144 VMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 203

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +F  +++L  YAK   +  AI+ F++M ER++VSWN +I+A +Q+G  +  L    +M +
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCRSGC 528
            G + DS +  S L+AC+    +  G Q    + +     P+ + Y  ++++++  + G 
Sbjct: 264 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGS 320

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINS 554
           F EA+++   +  + + + W+ +I  
Sbjct: 321 FKEAKRVFNSLQ-DRNSVSWTVLIGG 345



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 34/194 (17%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG------------- 425
            A  LR+     +L+  + LH  ++  G  S VF  + LL  Y   G             
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66

Query: 426 -------------------SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
                              SL DA + F  MP R++ SWN L+S   Q       L++F 
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 467 DMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            M +SG   P++ +   V+ +C   G  E   Q    +  K+      +   ++VD+  R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG-LFWKFDFWGDPDVETALVDMFVR 185

Query: 526 SGCFDEAEKLMAQM 539
            G  D A +L +Q+
Sbjct: 186 CGYVDFASRLFSQI 199


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/752 (36%), Positives = 452/752 (60%), Gaps = 11/752 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++V  N LI+ Y K G+   A  +F +M    R  VSW+ +I  ++  +    A   F+ 
Sbjct: 73  DSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLH 132

Query: 63  MRTDGGS--DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYC 119
           M     +   P+   F  LL  CS P      + + A ++K GY +S + +  +L+D + 
Sbjct: 133 MLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFT 192

Query: 120 KIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           K   LD+  AR VF +M  K+ V++  +IT +++ GL ++A+ LF  +    + P  FT 
Sbjct: 193 K-GGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTL 251

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + LSA V L   +LG+Q+H++V+++    +VFV   L+D+Y+K   V  +RK+F  M  
Sbjct: 252 TSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLH 311

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + +S+  +I+ Y  + Q +E++KLF  +       + F FS++L   A+  D  IG+Q+
Sbjct: 312 HNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQL 371

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H QTI     +   V NSL++MYA+ G  E A++ F  L   + + +     A  +  + 
Sbjct: 372 HGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDS 431

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           +E+ N  +E     + A   T+A +L  +A + ++  G+Q+H+ +++SGF +N+   +AL
Sbjct: 432 DESFNHEVE--HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNAL 489

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY+K G+ + A+Q F +M  RN+++W ++IS  A++G A   L+ F +M++ G +P+ 
Sbjct: 490 ISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNE 549

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           V+ ++VLSACSH GLI+E  ++FNSM   + + P+ EHYA MVD+L RSG   EA + + 
Sbjct: 550 VTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFIN 609

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            MPF+ D ++W + + SCR+H+N +  + AA ++ + E   D A Y+ +SN+YA  G+W+
Sbjct: 610 SMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREP-HDPATYILLSNLYASEGRWD 668

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
            V+ ++K+M+++ + K T YSW+E+ ++VH F   D  HPQ  +I  +++ L  ++K  G
Sbjct: 669 DVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLG 728

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y P+T   LHD ++E K + L  HSE++A+A+ALI+TP+  PI V KNLR C DCH AIK
Sbjct: 729 YIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIK 788

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IS +TGREI VRD++RFHH KDG CSC D+W
Sbjct: 789 YISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 198/381 (51%), Gaps = 9/381 (2%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP--EV 238
           L A +   ++ LG+ +H  ++ +    +  + N+L+ LYSK      A  +F  M   + 
Sbjct: 46  LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRE-LQFTR--FDRSQFPFSTLLSVVANKLDLQIGR 295
           D VS++ +I+C+A N     +L  F   LQ +R     +++ F+ LL   +N L    G 
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165

Query: 296 QIHTQTIVTTAI-SEVKVANSLVDMYAKCG-RFEEAKEIFANLSHISTVPWTAMISAYVQ 353
            I    + T    S V V  +L+DM+ K G   + A+ +F  + H + V WT MI+ Y Q
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQ 225

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            G L++A++LF  +  +  + D+ T  S+L A  EL   SLGKQLHS+VIRSG  S+VF 
Sbjct: 226 LGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFV 285

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G  L+DMYAKS +++++ + F  M   N++SW ALIS   Q+   Q  +K F +M+    
Sbjct: 286 GCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHV 345

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+  +  SVL AC+       G Q  +  T K  L        S++++  RSG  + A 
Sbjct: 346 TPNCFTFSSVLKACASLPDFGIGKQ-LHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 534 KLMAQMPFEPDEIMWSSVINS 554
           K    + FE + I +++  ++
Sbjct: 405 KAF-NILFEKNLISYNTAADA 424



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 142/282 (50%), Gaps = 9/282 (3%)

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           S LL       +L++G+ +H + I +    +  + NSL+ +Y+KCG +E A  IF N+ H
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 339 I--STVPWTAMISAYVQKGNLEEALNLFIEM--CRAN-ISADQATFASILRASAELASLS 393
                V W+A+IS +        AL  F+ M  C  N I  ++  F ++LR+ +     +
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 394 LGKQLHSFVIRSGFM-SNVFSGSALLDMYAKSG-SLKDAIQTFKEMPERNIVSWNALISA 451
            G  + +F++++G+  S+V  G AL+DM+ K G  ++ A   F +M  +N+V+W  +I+ 
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            +Q G     +  F  ++ S Y PD  +L S+LSAC        G Q  +S   +  L  
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQ-LHSWVIRSGLAS 281

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
                 ++VD+  +S   + + K+   M    + + W+++I+
Sbjct: 282 DVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALIS 322


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 457/814 (56%), Gaps = 87/814 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N ++ N++++GY K G+L+ A ELF+ M  R   SW  L+ GY Q  +F +  + FV M 
Sbjct: 70  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129

Query: 65  TDGGSDPDYVTFATLLSGCS----------------------EPDTANELIQVHADIIKF 102
             G S P+  TF  ++  C                       +PD    L+ +    ++ 
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM---FVRC 186

Query: 103 GYNSI-----------LIIC-NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           GY               I C NS++  Y K+  +D A   F++M ++D VS+N +I   +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G   EA+ L VEM   G +    T+ ++L+A   L  +  G+Q+HA V+++    + +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           VA+AL++LY+K     EA+++F  + + + VS+ V+I      E + +S++LF +++   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               QF  +TL+S   N++DL +GRQ+H+  + +     + V+NSL+ +YAKCG  + A+
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN------------------- 371
            +F+++S    V WT+MI+AY Q GN+ +A   F  M   N                   
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEED 486

Query: 372 -------------ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
                        ++ D  T+ ++ R  A++ +  LG Q+    +++G + NV   +A +
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAI 546

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MY+K G + +A + F  +  +++VSWNA+I+  +Q+G  +   K+F+DM+  G +PD +
Sbjct: 547 TMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           S ++VLS CSH GL++EG  YF+ MT+ + + P  EH++ MVD+L R+G   EA+ L+ +
Sbjct: 607 SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MP +P   +W +++++C+IH N E A+ AA  +F+++   D+  Y+ ++ IY+ AG+ + 
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDS-PDSGSYMLLAKIYSDAGKSDD 725

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            +QV+K MR++G++K   YSW+E+++KVHVF A+D  HPQ   IR K++ LM+++   GY
Sbjct: 726 SAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY 785

Query: 659 KPDTSCALHDEDEEIKVESLK---YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
                         ++ ES +   +HSE+LA+AF +++ P   PI +MKNLR C DCH  
Sbjct: 786 --------------VRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTV 831

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IKLIS +T RE  +RD  RFHHFK G CSC D+W
Sbjct: 832 IKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 182/399 (45%), Gaps = 45/399 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +    + LI  Y K G+   A+ +FNS+ DR +VSWT+LIGG  Q   F ++ +LF
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 359

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR +  +  D    ATL+SGC          Q+H+  +K G+N  +++ NSL+  Y K
Sbjct: 360 NQMRAELMA-IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK 418

Query: 121 IRCLDL---------------------------------ARRVFKEMPQKDSVSFNALIT 147
             C DL                                 AR  F  M  ++++++NA++ 
Sbjct: 419 --CGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 476

Query: 148 GFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIA---LGRQVHAFVVKT 203
            + + G  E+ +K++  M       P   T+        G ADI    LG Q+    VK 
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR---GCADIGANKLGDQIIGHTVKA 533

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             + NV VANA + +YSK   + EA+KLF  +   D VS+N MIT Y+ +   K++ K F
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 593

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAK 322
            ++           +  +LS  ++   +Q G+           IS  ++  + +VD+  +
Sbjct: 594 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 653

Query: 323 CGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            G   EAK++   +    T   W A++SA    GN E A
Sbjct: 654 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 70/326 (21%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK------------------------ 330
           R +H + +     S V + N+L+  Y  CG   +A+                        
Sbjct: 24  RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 83

Query: 331 --------EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA-TFAS 381
                   E+F  +       W  ++S Y Q     + L  F+ M R+  S   A TF  
Sbjct: 84  QGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCC 143

Query: 382 ILRASAELASLSLGKQLHSF-------------------VIRSGFMS------------N 410
           ++++   L    L  QL                       +R G++              
Sbjct: 144 VMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 203

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +F  +++L  YAK   +  AI+ F++M ER++VSWN +I+A +Q+G  +  L    +M +
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCRSGC 528
            G + DS +  S L+AC+    +  G Q    + +     P+ + Y  ++++++  + G 
Sbjct: 264 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGS 320

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINS 554
           F EA+++   +  + + + W+ +I  
Sbjct: 321 FKEAKRVFNSLQ-DRNSVSWTVLIGG 345



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 34/194 (17%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG------------- 425
            A  LR+     +L+  + LH  ++  G  S VF  + LL  Y   G             
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66

Query: 426 -------------------SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
                              SL DA + F  MP R++ SWN L+S   Q       L++F 
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 467 DMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            M +SG   P++ +   V+ +C   G  E   Q    +  K+      +   ++VD+  R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG-LFWKFDFWGDPDVETALVDMFVR 185

Query: 526 SGCFDEAEKLMAQM 539
            G  D A +L +Q+
Sbjct: 186 CGYVDFASRLFSQI 199


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/744 (36%), Positives = 424/744 (56%), Gaps = 14/744 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G+L  AR++F+ M  R+  +W  +I  YS   +  EAF +F  M+ +G    
Sbjct: 201 LVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEG-ERC 259

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VTF ++L  C  P+T      V   I +  +   L +  +L+  Y + R  + A +VF
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M Q + ++++A+IT FA  G   EA++ F  MQ  G  P+  TF + L+     + + 
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 379

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
              ++H  + +    +   + NAL+++Y + +   +AR +F ++   + +S+N MI  Y 
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYV 439

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             E++ ++L+LFR +Q       +  F T+L          IG    T+ +V   + E  
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT------IGSHGRTRKLVHQCVEESG 493

Query: 312 ------VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
                 V  SLV+MYAK G  + A+ I   +       W  +I+ Y   G   EAL  + 
Sbjct: 494 LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQ 553

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           ++    I  D+ TF S+L A     SL+ GK +HS  +  G  S+V   +AL +MY+K G
Sbjct: 554 KLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 613

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S+++A + F  MP R+ VSWN ++ A AQ+G+++  LK    M Q G + + ++ +SVLS
Sbjct: 614 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 673

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +CSH GLI EG QYF+S+     +  K EHY  +VD+L R+G   EAEK +++MP EP  
Sbjct: 674 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGI 733

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           + W+S++ +CR+ K+L+  K AA +L +++    +A  V +SNIY+  G W++ +++++A
Sbjct: 734 VTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSAS-VVLSNIYSERGDWKNAAKLRRA 792

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M  R V+KV   S +++K+KVH F   D  HP+  EI  K+E L   M++ GY PDT   
Sbjct: 793 MASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 852

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD DEE K   L YHSE+LAIAF LI+TPE S + + KNLR C DCH A K ISKITGR
Sbjct: 853 LHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGR 912

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD+ RFHHF+DG CSC+D+W
Sbjct: 913 EIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 279/559 (49%), Gaps = 8/559 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y + G+L  A   F  +  R  VSW ++I  YS    F+EA  LF  M  +G + P+ +T
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVA-PNAIT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
              +L+ C       + I VHA  ++ G+    ++  +L++ Y K   L  A+ VF+EM 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 136 QKDSVSFNALITGFAKEGLNEE-AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           +K+ V++NA++  ++ +G   + A++LF  M   G K +  TF   L++ V    +  G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            +H+ V ++    +VFV  AL++ Y+K   + +ARK+F  MP     ++N MI+ Y+ +E
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 255 QYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           +  E+  +F+ +Q    R DR    F ++L    N   LQ G+ +      T+   ++ V
Sbjct: 241 RSGEAFFIFQRMQQEGERCDR--VTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+ MYA+C   E+A ++F  +   + + W+A+I+A+   G+  EAL  F  M +  I
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ TF S+L      + L    ++H  +   G        +AL+++Y +  S  DA  
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F ++   N++SWN++I    Q       L+ F  M Q G QPD V+ +++L AC+  G 
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGS 477

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                +  +   ++  L        S+V++  ++G  D AE ++ +M  E     W+ +I
Sbjct: 478 HGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLI 536

Query: 553 NSCRIHKNLEFAKKAADQL 571
           N   +H     A +A  +L
Sbjct: 537 NGYALHGRSREALEAYQKL 555



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 197/399 (49%), Gaps = 3/399 (0%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YS+   + +A   FG++   + VS+NVMI+ Y+  + ++E+L LF  +       +   
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              +L+   +  +L+ G  +H  ++         VA +L++MY KCG   +A+ +F  ++
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 338 HISTVPWTAMISAYVQKGNLEE-ALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
             + V W AM+  Y  +G   + A+ LF  M    + A+  TF ++L +  +  +L  GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            +HS V  S    +VF  +AL++ Y K GSL DA + F  MP R++ +WN++ISA + + 
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            +      F+ M Q G + D V+ LS+L AC +   ++ G     S+++           
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET-SFELDLFVG 299

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            +++ +  R    ++A ++  +M  + + I WS++I +   H +   A +    + +   
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
           L +   ++++ N +      E +S++   + E G+   T
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTT 397



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 198/443 (44%), Gaps = 41/443 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +  T   N L++ Y +  +   AR +F+ +     +SW  +IG Y Q  +  +A +LF  
Sbjct: 394 DDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRT 453

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+   G  PD V F T+L  C+          VH  + + G     ++  SLV+ Y K  
Sbjct: 454 MQQQ-GIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAG 512

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            LD+A  + +EM ++   ++N LI G+A  G + EA++ + ++Q         TF + L+
Sbjct: 513 ELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLN 572

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      +A G+ +H+  V+     +V V NAL ++YSK   +  AR++F  MP    VS
Sbjct: 573 ACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS 632

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+  YA + + +E LKL R+++      +   F ++LS  ++   +  G Q      
Sbjct: 633 WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 692

Query: 303 VTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
               I EVK  +   LVD+  + G+ +EA++  + +      V W +++ A         
Sbjct: 693 HDRGI-EVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGA--------- 742

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
                   CR     D+        A+ +L  L  G    S V              L +
Sbjct: 743 --------CRVQKDLDRGKL-----AAGKLLELDPGNSSASVV--------------LSN 775

Query: 420 MYAKSGSLKDAIQTFKEMPERNI 442
           +Y++ G  K+A +  + M  R +
Sbjct: 776 IYSERGDWKNAAKLRRAMASRRV 798


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/657 (39%), Positives = 399/657 (60%), Gaps = 2/657 (0%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA +I  GY     + N LV+ Y K   LD A ++F  MPQ++ VS+ A+I+G ++  
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNS 85

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              EAI+ F  M+  G  P+ F F++A+ A   L  I +G+Q+H   +K      +FV +
Sbjct: 86  KFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGS 145

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            L D+YSK   + +A K+F EMP  D VS+  MI  Y+   +++E+L  F+++       
Sbjct: 146 NLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTI 205

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            Q    + L         + GR +H+  +     S++ V N+L DMY+K G  E A  +F
Sbjct: 206 DQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF 265

Query: 334 ANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
              S   + V +T +I  YV+   +E+ L++F+E+ R  I  ++ TF+S+++A A  A+L
Sbjct: 266 GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAAL 325

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             G QLH+ V++  F  + F  S L+DMY K G L+ AIQ F E+ +   ++WN+L+S  
Sbjct: 326 EQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVF 385

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            Q+G  +  +K FE MV  G +P++++ +S+L+ CSH GL+EEGL YF SM + Y + P 
Sbjct: 386 GQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 445

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           +EHY+ ++D+L R+G   EA++ + +MPFEP+   W S + +CRIH + E  K AA++L 
Sbjct: 446 EEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV 505

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           K+E  +++   V +SNIYA   QWE V  V+  MR+  V+K+  YSWV++  K HVF A 
Sbjct: 506 KLEP-KNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  H + + I  K++ L+ ++K  GY P T     D D+ +K + L  HSER+A+AFALI
Sbjct: 565 DWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALI 624

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + P G PI+V KNLR C DCH+AIK ISK+TGR+I VRD+SRFHHF DG CSC D+W
Sbjct: 625 SMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 243/483 (50%), Gaps = 6/483 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T  TN L++ Y K G L  A +LF++M  R  VSWT +I G SQ ++F EA + F  MR 
Sbjct: 40  TFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRI 99

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G  P    F++ +  C+   +     Q+H   +KFG  S L + ++L D Y K   + 
Sbjct: 100 -CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMF 158

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A +VF+EMP KD VS+ A+I G++K G  EEA+  F +M             + L A  
Sbjct: 159 DACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACG 218

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYN 244
            L     GR VH+ VVK  F  ++FV NAL D+YSK   +  A  +FG   E  + VSY 
Sbjct: 219 ALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYT 278

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  Y   EQ ++ L +F EL+    + ++F FS+L+   AN+  L+ G Q+H Q +  
Sbjct: 279 CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKI 338

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +  V++ LVDMY KCG  E A + F  +   + + W +++S + Q G  ++A+  F
Sbjct: 339 NFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFF 398

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
             M    +  +  TF S+L   +    +  G    +S     G +      S ++D+  +
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 458

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G LK+A +    MP E N   W + + AC  +GD +    + E +V+   +P +   L 
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK--LEPKNSGALV 516

Query: 483 VLS 485
           +LS
Sbjct: 517 LLS 519



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 198/364 (54%), Gaps = 7/364 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+Q+HA ++   +    F+ N L+++YSK   +  A KLF  MP+ + VS+  MI+  + 
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N ++ E+++ F  ++      +QF FS+ +   A+   +++G+Q+H   +     SE+ V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L DMY+KCG   +A ++F  +     V WTAMI  Y + G  EEAL  F +M    +
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
           + DQ    S L A   L +   G+ +HS V++ GF S++F G+AL DMY+K+G ++ A  
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 433 TFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
            F    E RN+VS+  LI    +    +  L  F ++ + G +P+  +  S++ AC++  
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            +E+G Q      Q  K+   ++ + S  +VD+  + G  + A +   ++  +P EI W+
Sbjct: 324 ALEQGTQLH---AQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWN 379

Query: 550 SVIN 553
           S+++
Sbjct: 380 SLVS 383



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 38/365 (10%)

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           R     + ++   A    L+ G+Q+H   I         + N LV+MY+KCG  + A ++
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   + V WTAMIS   Q     EA+  F  M        Q  F+S +RA A L S+
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            +GKQ+H   ++ G  S +F GS L DMY+K G++ DA + F+EMP ++ VSW A+I   
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQ--- 498
           ++ G+ +  L +F+ M+      D   L S L AC            H  +++ G +   
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 499 -YFNSMTQKYKLRPKKEHYASM--VDILCRS----GC----FDEAEKL---------MAQ 538
              N++T  Y      E  +++  +D  CR+     C    + E E++         + +
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA--MSNIYAVAGQW 596
              EP+E  +SS+I +C     LE   +   Q+ K+    D  P+V+  + ++Y   G  
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN--FDEDPFVSSILVDMYGKCGLL 360

Query: 597 ESVSQ 601
           E   Q
Sbjct: 361 EHAIQ 365


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/750 (37%), Positives = 429/750 (57%), Gaps = 8/750 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           +++T   N LI+ Y K G L +A  +F  M D R   SW  +I G  Q   F +A  LF 
Sbjct: 196 DRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFR 255

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M+    S   Y T   +L  C+E    N   ++HA ++K G + + I CN+L+  Y K 
Sbjct: 256 GMQRAVLSMNSYTTVG-VLQVCTELAQLNLGRELHAALLKSG-SEVNIQCNALLVMYTKC 313

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D A RVF+E+ +KD +S+N++++ + + GL  EAI+   EM   GF+P D     +L
Sbjct: 314 GRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQP-DHACIVSL 372

Query: 182 SAGVG-LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           S+ VG L  +  G++VHA+ +K     +  V N L+D+Y K   +  +  +F  M   D 
Sbjct: 373 SSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDH 432

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  +ITCYA + ++ E+L++FRE Q            ++L   +    + + +Q+H  
Sbjct: 433 ISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCY 492

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I    + ++ V N ++D+Y +CG    + ++F  +     V WT+MI+ Y   G L EA
Sbjct: 493 AI-RNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEA 551

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF EM   ++  D     SIL A   L+SL+ GK++H F+IR  F       S+L+DM
Sbjct: 552 LVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDM 611

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+  GSL  A++ F  +  +++V W A+I+A   +G  +  +  F+ M+Q+G  PD VS 
Sbjct: 612 YSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSF 671

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L++L ACSH  L+ EG  Y + M   Y+L P +EHYA +VD+L RSG  +EA + +  MP
Sbjct: 672 LALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMP 731

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +P  ++W S++ +CR+HKN E A  AA++L ++E   +   YV +SN++A  G+W +  
Sbjct: 732 LKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEP-DNPGNYVLVSNVFAEMGKWNNAK 790

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYK 659
           +V+  + ERG+RK  A SW+E+ + VH FT  D  H     I  K+  + + ++KE GY 
Sbjct: 791 EVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYT 850

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
            DT   LHD  EE KV+ L  HSERLAI+F LINT  G P+ + KNLR C DCH   KL+
Sbjct: 851 EDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLV 910

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SK+  R+I VRD++RFHHF  G CSC DFW
Sbjct: 911 SKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 170/561 (30%), Positives = 284/561 (50%), Gaps = 11/561 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDY 73
           Y K G +A AR LF+ M  RT  SW  LIG Y       EA  ++  MR    S   PD 
Sbjct: 105 YGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDG 164

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
            T A++L             +VH   +K G +    + N+L+  Y K   LD A RVF+ 
Sbjct: 165 CTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFEL 224

Query: 134 MPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           M   +D  S+N++I+G  + G+  +A+ LF  MQ      + +T    L     LA + L
Sbjct: 225 MHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNL 284

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++HA ++K+    N+   NALL +Y+K   V  A ++F E+ E D +S+N M++CY  
Sbjct: 285 GRELHAALLKSGSEVNI-QCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQ 343

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N  Y E+++   E+    F        +L S V +   L  G+++H   I     S+ +V
Sbjct: 344 NGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQV 403

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+DMY KC   E +  +F  +     + WT +I+ Y Q     EAL +F E  +  I
Sbjct: 404 GNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGI 463

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D     SIL A + L ++ L KQLH + IR+G +  V   + ++D+Y + G +  +++
Sbjct: 464 KVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVK-NRIIDIYGECGEVYHSLK 522

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F+ + +++IV+W ++I+  A +G     L  F +M  +  QPDSV+L+S+L A      
Sbjct: 523 MFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSS 582

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + +G +    + ++     ++   +S+VD+    G    A K+   +  + D ++W+++I
Sbjct: 583 LAKGKEVHGFLIRR-NFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMI 640

Query: 553 NSCRIHKNLEFAKKAADQLFK 573
           N+  +H +    K+A D LFK
Sbjct: 641 NATGMHGH---GKQAID-LFK 657



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 266/599 (44%), Gaps = 45/599 (7%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NS 106
           ++   R+A +L    +T G S P    +  +L   +      + +QVHA  +  G     
Sbjct: 36  KEGNLRQALRLLTS-QTPGRSPPQE-HYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGD 93

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
              +   L+  Y K   +  AR +F  M  +   S+NALI  +   G   EA+ ++  M+
Sbjct: 94  DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153

Query: 167 ---HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
                G  P   T A+ L A     D   G +VH   VK     + FVANAL+ +Y+K  
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213

Query: 224 CVVEARKLFGEMPE-VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
            +  A ++F  M +  D  S+N MI+    N  + ++L LFR +Q      + +    +L
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVL 273

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHIST 341
            V      L +GR++H   + +   SEV +  N+L+ MY KCGR + A  +F  +     
Sbjct: 274 QVCTELAQLNLGRELHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDY 331

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           + W +M+S YVQ G   EA+    EM R     D A   S+  A   L  L  GK++H++
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            I+    S+   G+ L+DMY K   ++ +   F  M  ++ +SW  +I+  AQ+      
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEA 451

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGL------------- 497
           L+ F +  + G + D + + S+L ACS           HC  I  GL             
Sbjct: 452 LEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIY 511

Query: 498 ----QYFNSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMW 548
               + ++S+ + ++   +K+   + SM++    SG  +EA  L A+M     +PD +  
Sbjct: 512 GECGEVYHSL-KMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVAL 570

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            S++ +     +L   K+    L +     + A   ++ ++Y+  G      +V  A++
Sbjct: 571 VSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVK 629



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 206/444 (46%), Gaps = 68/444 (15%)

Query: 267 QFTRFDRSQFP--------FSTLLSVVANKLDLQIGRQIHTQTIVTTAI--SEVKVANSL 316
           Q  R   SQ P        +  +L +VA K  +  G Q+H   + T ++   +  +A  L
Sbjct: 42  QALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKL 101

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM---CRANIS 373
           + MY KCGR  +A+ +F  +S  +   W A+I AY+  G+  EAL ++  M     + ++
Sbjct: 102 LFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVA 161

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T AS+L+AS        G ++H   ++ G   + F  +AL+ MYAK G L  A++ 
Sbjct: 162 PDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRV 221

Query: 434 FKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
           F+ M + R++ SWN++IS C QNG     L  F  M ++    +S + + VL  C+    
Sbjct: 222 FELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQ 281

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILC--------RSGCFDEAEKLMAQMPFEPD 544
           +  G +   ++ +            S V+I C        + G  D A ++  ++  E D
Sbjct: 282 LNLGRELHAALLKS----------GSEVNIQCNALLVMYTKCGRVDSALRVFREID-EKD 330

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR-----DAAPYVAMS------------ 587
            I W+S++ SC +   L +A+      F  E LR     D A  V++S            
Sbjct: 331 YISWNSML-SCYVQNGL-YAEAIE---FISEMLRGGFQPDHACIVSLSSAVGHLGWLLNG 385

Query: 588 ---NIYAVAGQWESVSQVKKAMRERGVR----KVTAYSWVELKSKVHV-FTANDELHPQT 639
              + YA+  + +S +QV   + +  ++    + +A+ +  ++ K H+ +T     + Q+
Sbjct: 386 KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQS 445

Query: 640 NEIRRKIENL--MQEMKKEGYKPD 661
           +   R IE L   +E +KEG K D
Sbjct: 446 S---RHIEALEIFREAQKEGIKVD 466


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 292/747 (39%), Positives = 447/747 (59%), Gaps = 13/747 (1%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+SG+ + G + +A+ +F  M DR AV+   L+ G ++++Q  EA K+F +M+     + 
Sbjct: 291  LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL--VEI 348

Query: 72   DYVTFATLLSGCSEPDTANELI----QVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDL 126
            +  ++A LLS  +E     E      +VHA +I+     + ++I N+LV+ Y K   +D 
Sbjct: 349  NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDN 408

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            AR +F+ MP KD+VS+N++I+G       EEA+  F  M+  G  PS F+  + LS+   
Sbjct: 409  ARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCAS 468

Query: 187  LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            L  I LG+Q+H   +K     +V V+NALL LY++ DC+ E +K+F  MPE D VS+N  
Sbjct: 469  LGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSF 528

Query: 247  ITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            I   A +E    +++K F E+    +  ++  F  +LS V++   L++GRQIH   +  +
Sbjct: 529  IGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHS 588

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLF 364
               +  + N+L+  Y KC + E+ + IF+ +S     V W AMIS Y+  G L +A+ L 
Sbjct: 589  VADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLV 648

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
              M +     D  T A++L A A +A+L  G ++H+  IR+   + V  GSAL+DMYAK 
Sbjct: 649  WLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKC 708

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            G +  A + F+ MP RNI SWN++IS  A++G     LK F  M Q G  PD V+ + VL
Sbjct: 709  GKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVL 768

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL++EG ++F SM + Y+L P+ EH++ MVD+L R+G   + E+ +  MP  P+
Sbjct: 769  SACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPN 828

Query: 545  EIMWSSVINS-CRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
             ++W +++ + CR + +N E  ++AA  L ++E L +A  YV +SN++A  G+WE V + 
Sbjct: 829  ALIWRTILGACCRANSRNTELGRRAAKMLIELEPL-NAVNYVLLSNMHAAGGKWEDVEEA 887

Query: 603  KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
            + AMR   V+K    SWV +K  VHVF A D+ HP+  +I  K++ +M +M+  GY P+T
Sbjct: 888  RLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPET 947

Query: 663  SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              AL+D + E K E L YHSE+LAIAF L    E  PI ++KNLR C DCH A K IS I
Sbjct: 948  KYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-LPIRIIKNLRVCGDCHTAFKYISNI 1006

Query: 723  TGREITVRDSSRFHHFKDGFCSCRDFW 749
              R+I +RDS+RFHHF  G CSC+D+W
Sbjct: 1007 VNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 303/568 (53%), Gaps = 21/568 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ +V++GNL +A++LF+ M  +  VSW+ L+ GY+Q     EA  LF  +    G 
Sbjct: 78  NTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGI-ISAGL 136

Query: 70  DPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC-LDL 126
            P++    + L  C E  P+     +++H  I K  Y S +++ N L+  Y      +D 
Sbjct: 137 LPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDD 196

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFTFAAALS 182
           ARRVF+E+  K S S+N++I+ + + G    A KLF  MQ     L  +P+++TF + ++
Sbjct: 197 ARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVT 256

Query: 183 AGVGLAD--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
               L D  + L  Q+ A + K++FV++++V +AL+  ++++  +  A+ +F +M + + 
Sbjct: 257 VACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNA 316

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQFPFSTLLSVVANKLDLQIGR---- 295
           V+ N ++   A   Q +E+ K+F+E++     + S   ++ LLS      +L+ G+    
Sbjct: 317 VTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASS--YAVLLSAFTEFSNLKEGKRKGQ 374

Query: 296 QIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           ++H   I    +   + + N+LV++YAKC   + A+ IF  +    TV W ++IS     
Sbjct: 375 EVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHN 434

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
              EEA+  F  M R  +   + +  S L + A L  + LG+Q+H   I+ G   +V   
Sbjct: 435 ERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVS 494

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN-GDAQATLKSFEDMVQSGY 473
           +ALL +YA++  +++  + F  MPE + VSWN+ I A A +       +K F +M+Q+G+
Sbjct: 495 NALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGW 554

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
           +P+ V+ +++LSA S   L+E G Q  +++  K+ +        +++    +    ++ E
Sbjct: 555 KPNRVTFINILSAVSSLSLLELGRQ-IHALILKHSVADDNAIENTLLAFYGKCEQMEDCE 613

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            + ++M    DE+ W+++I S  IH  +
Sbjct: 614 IIFSRMSERRDEVSWNAMI-SGYIHNGI 640



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 254/481 (52%), Gaps = 17/481 (3%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
           T  +  Q+H  I K G  S +  CN+LV+ + +   L  A+++F EMPQK+ VS++ L++
Sbjct: 54  TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG--VGLADIALGRQVHAFVVKTNF 205
           G+A+ G+ +EA  LF  +   G  P+ +   +AL A   +G   + LG ++H  + K+ +
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173

Query: 206 VENVFVANALLDLYSKHDCVV-EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
             ++ ++N L+ +YS     + +AR++F E+      S+N +I+ Y        + KLF 
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233

Query: 265 ELQFTRFD----RSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSLVD 318
            +Q    +     +++ F +L++V  + +D  L +  Q+  +   ++ + ++ V ++LV 
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVS 293

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
            +A+ G  + AK IF  +   + V    ++    ++   EEA  +F EM +  +  + ++
Sbjct: 294 GFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASS 352

Query: 379 FASILRASAELASLSLGK----QLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQT 433
           +A +L A  E ++L  GK    ++H+++IR+  +   +  G+AL+++YAK  ++ +A   
Sbjct: 353 YAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSI 412

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F+ MP ++ VSWN++IS    N   +  +  F  M ++G  P   S++S LS+C+  G I
Sbjct: 413 FQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
             G Q  +    K  L        +++ +   + C +E +K+   MP E D++ W+S I 
Sbjct: 473 MLG-QQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP-EYDQVSWNSFIG 530

Query: 554 S 554
           +
Sbjct: 531 A 531


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/814 (33%), Positives = 452/814 (55%), Gaps = 78/814 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRT--AVSWTILIGGYSQKNQFR----EA 56
           ++N  + N +I   V S  ++ A +LF+ M  R   +VSWT +I GYSQ N F     E 
Sbjct: 71  HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQ-NGFHSRSFET 129

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
           F L +    DGG + D  +F +++  C     +   IQ+HA + K G+     I NS+V 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 117 SYCKIRCLDLAR-------------------------------RVFKEMPQKDSVSFNAL 145
            Y K   +DLA                                ++F  MP++D VS+N L
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I+ F++ G   + + +FVEM + GF P+  T+ + LSA    +D+  G  +HA +++   
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             ++   N L+D+Y+K  C+  A+++F  + E D +S+N +IT        +++L LF +
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           ++ +     +F   T+L V +       G  +H  TI +   S   V N+++ MYAKCG 
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429

Query: 326 FEEAKEIFANLSHISTVPWTAMISA-------------------------------YVQK 354
            ++A  +F  +   +T+ WTAMI+A                               YVQ 
Sbjct: 430 TDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQN 489

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  EE L L++ M    +  D  TF + +RA A+LA + LG Q+ +   + G   NV   
Sbjct: 490 GFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVA 549

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++++ MY++ G +K+A  TF  + +++++SWNA+++A AQNG     + +FEDM+++  +
Sbjct: 550 NSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECK 609

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ +S +SVLS CSH GL+ EG  YF+SMT+ + + P  EH++ MVD+L R+G  ++A+ 
Sbjct: 610 PNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKD 669

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           L+  MPF+P+  +WS+++ SCR+H +L  A+ AA +L +++ +  +  YV +SN+Y+ +G
Sbjct: 670 LIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELD-VEGSEGYVLLSNMYSESG 728

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           + ++V+ ++K M+ +G+R     SW+E+ ++VHVFT ++  HPQ  E+  K+E +M+ ++
Sbjct: 729 ELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIE 788

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
             G       ++H         S KYHSE+LA AF L+N P   PI VMKNLR C DCH 
Sbjct: 789 DTGKYITVESSVH--------RSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHL 840

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
            IKL+S +T RE+ +RD  RFHHFKDG CSC+D+
Sbjct: 841 VIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 210/503 (41%), Gaps = 78/503 (15%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSK----HDC----------------------- 224
           + R++HA ++ +    ++F+ N LL +YS     HD                        
Sbjct: 26  IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85

Query: 225 ----VVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKESLKLF----RELQFTRFDRS 274
               + +A KLF EMP    D VS+  MI+ Y+ N  +  S + F    R+      +  
Sbjct: 86  SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F F++++    +  D ++  Q+H          E  + NS+V MY KCG  + A+ +F 
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205

Query: 335 NLSHIST-------------------------------VPWTAMISAYVQKGNLEEALNL 363
           ++   S                                V W  +IS + Q G   + L +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F+EMC    S +  T+ S+L A A  + L  G  LH+ ++R     ++  G+ L+DMYAK
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G L  A + FK + E + +SWN+LI+     G  +  L  F  M +S    D   L ++
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L  CS       G +  +  T K  +        +++ +  + G  D+A+ +   MP   
Sbjct: 386 LGVCSGPDYASTG-ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR- 443

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           + I W+++I +    ++ +  K  A   F M   R+   + +M + Y   G  E   ++ 
Sbjct: 444 NTISWTAMITA--FSRSGDIGK--ARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLY 499

Query: 604 KAMRERGVRKVTAYSWVELKSKV 626
            +MR  GV+      W+   + +
Sbjct: 500 VSMRSNGVQP----DWITFTTSI 518



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 8/240 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT+S   +I+ + +SG++  AR  F+ M +R  V+W  ++  Y Q     E  KL+
Sbjct: 440 MPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLY 499

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V MR++ G  PD++TF T +  C++       +QV     KFG +  + + NS+V  Y +
Sbjct: 500 VSMRSN-GVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A+  F  +  KD +S+NA++  FA+ GL  + I  F +M     KP+  ++ + 
Sbjct: 559 CGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSV 618

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVAN----ALLDLYSKHDCVVEARKLFGEMP 236
           LS    +  +A G+  H F   T  V  +   N     ++DL  +   + +A+ L   MP
Sbjct: 619 LSGCSHMGLVAEGK--HYFDSMTR-VFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMP 675



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS----------- 340
            I R++H Q I++   S + + N+L+ MY+ CG   +A ++F    H +           
Sbjct: 25  HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84

Query: 341 ----------------------TVPWTAMISAYVQKGNLEEALNLFIEMCR----ANISA 374
                                 +V WT MIS Y Q G    +   F  M R       + 
Sbjct: 85  VSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNY 144

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK------ 428
           D  +F S+++A   L    L  QLH+ V + GF       ++++ MY K G +       
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204

Query: 429 -------------------------DAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
                                     A+Q F  MPER+ VSWN LIS  +Q+G     L 
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F +M   G+ P+ ++  SVLSAC+    ++ G  + ++   + +          ++D+ 
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWG-AHLHARILRMEHSLDLVFGNGLIDMY 323

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            + GC D A+++   +  E D I W+S+I  
Sbjct: 324 AKCGCLDLAKRVFKSLR-EHDHISWNSLITG 353


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/738 (35%), Positives = 420/738 (56%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + K G++  A  +F  + D+    +  ++ GY++ +    A      MR D    P
Sbjct: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD-VKP 145

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL  C +        ++H  +I   + + +     +V+ Y K R +D A ++F
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP++D VS+N +I GF++ G  ++A++L + MQ  G +P   T    L A   +  + 
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G+ +H + ++  F + V ++ AL D+YSK   V  AR +F  M +   VS+N M+  Y 
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N + ++++ +F ++     D +       L   A+  DL+ G+ +H         S++ 
Sbjct: 326 QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS 385

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY+KC R + A +IF NL+  + V W AMI  Y Q G + EALN F EM    
Sbjct: 386 VMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG 445

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T  S++ A AEL+     K +H  +IRS    N+F  +AL+DMY+K G++  A 
Sbjct: 446 MKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMAR 505

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  + +R++++WNA+I     +G  +A L  F+ M +   +P+ ++ LSV+SACSH G
Sbjct: 506 KLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG 565

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EGL++F SM Q Y L P  +HY +MVD+L R+G   EA   +  MP  P   ++ + 
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAX 625

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
             +C+IHKN+E  +KAA +LF++    +   +V ++NIYA   +W  V++V+K M ++G+
Sbjct: 626 XGACKIHKNIEVGEKAAKKLFELNP-DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    S VEL+++VH F +    HPQ+  I   +E L+ E+K  GY PDT+  L D ++
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVED 743

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           +++ + L  HSE+LAIAF L+NT  G+ I V KNLR C DCH A K IS +TGREI VRD
Sbjct: 744 DVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRD 803

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC D+W
Sbjct: 804 MQRFHHFKNGICSCGDYW 821



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 222/453 (49%), Gaps = 9/453 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  +   +++ Y K   +  A ++F+ M +R  VSW  +I G+SQ    ++A +L + M+
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD +T  T+L   ++         +H   I+ G+  ++ I  +L D Y K   +
Sbjct: 241 -DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSV 299

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR +F  M QK  VS+N+++ G+ + G  E+AI +F +M   G  P+  T   AL A 
Sbjct: 300 ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHAC 359

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+  G+ VH FV + N   ++ V N+L+ +YSK   V  A  +F  +     VS+N
Sbjct: 360 ADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWN 419

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---IHTQT 301
            MI  YA N +  E+L  F E++        F   T++SV+    +L + R    IH   
Sbjct: 420 AMILGYAQNGRVSEALNCFSEMKSLGMKPDSF---TMVSVIPALAELSVTRHAKWIHGLI 476

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I +     + V  +LVDMY+KCG    A+++F  +S    + W AMI  Y   G    AL
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAAL 536

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDM 420
           +LF +M +  +  +  T+ S++ A +    +  G +   S     G   ++    A++D+
Sbjct: 537 DLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDL 596

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
             ++G +K+A    + MP    I  + A   AC
Sbjct: 597 LGRAGRIKEAWDFIENMPISPGITVYGAXXGAC 629



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 157/303 (51%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+   V+K            L+ L+SK+  + EA ++F  + +     Y+ M+  YA N
Sbjct: 66  HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKN 125

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              + +L     +++       + F+ LL V  +  DL+ G++IH Q I  +  + V   
Sbjct: 126 SSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAM 185

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
             +V+MYAKC + ++A ++F  +     V W  +I+ + Q G  ++AL L + M      
Sbjct: 186 TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR 245

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T  ++L A+A++  L +GK +H + IR+GF   V   +AL DMY+K GS++ A   
Sbjct: 246 PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M ++ +VSWN+++    QNG+ +  +  FE M++ G  P  V+++  L AC+  G +
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365

Query: 494 EEG 496
           E G
Sbjct: 366 ERG 368



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N   T  L+  Y K G +  AR+LF+ + DR  ++W  +I GY      R A  LF  
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M+  G  +P+ +T+ +++S CS     +E
Sbjct: 542 MKK-GAVEPNDITYLSVISACSHSGLVDE 569


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/734 (37%), Positives = 413/734 (56%), Gaps = 2/734 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  A ++F  M ++  V+W +L+ GY+Q+       KLF  M  +     
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM-MELDVKC 312

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T  T+L GC+      +   +H+ IIK GY     I   LVD Y K      A  VF
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + + D V ++ALIT   ++G +EE+IKLF  M+     P+ +T  + LSA     ++ 
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ +HA V K  F  +V V+NAL+ +Y K+ CV +  KL+  M + D +S+N  ++   
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
               Y   L +F  +    F  + + F ++L   +   D+  GRQ+H   I         
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  +L+DMYAKC   E+A   F  LS      WT +I+ Y Q    E+ALN F +M +  
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T A  L   + LASL  G+QLHS V +SG +S++F GSAL+DMYAK G +++A 
Sbjct: 613 VKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAE 672

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ +  R+ ++WN +I   AQNG     L +F  M+  G  PD V+   +LSACSH G
Sbjct: 673 ALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQG 732

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG ++FNSM + + + P  +H A MVDIL R G FDE E  + +M    + ++W +V
Sbjct: 733 LVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETV 792

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + + ++H NL   +KAA++LF+++   + + Y+ +SNI+A  G+W+ V +V+  M  +GV
Sbjct: 793 LGASKMHNNLVLGEKAANKLFELQP-EEESSYILLSNIFATEGRWDDVKRVRSLMSSKGV 851

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SWVE   +VH F ++D  HPQ  EI  K++ L +E+    Y P T   LH+  E
Sbjct: 852 KKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGE 911

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K E+L++HSERLA+ FALI+T     I + KNLR C DCH  +K IS IT +EI VRD
Sbjct: 912 TEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRD 971

Query: 732 SSRFHHFKDGFCSC 745
             RFHHFK+G CSC
Sbjct: 972 VRRFHHFKNGACSC 985



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 271/541 (50%), Gaps = 3/541 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K    A AR +   M DR  VSWT LI G   +    ++  LF +M+ +G   P
Sbjct: 153 LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM-P 211

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T AT L  CS     +   Q+HA   K G    L + ++LVD Y K   ++LA ++F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+++ V++N L+ G+A+ G     +KLF  M  L  K ++FT    L       ++ 
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ +H+ ++K  +  N F+   L+D+YSK    ++A  +F  + + D V ++ +ITC  
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              Q +ES+KLF  ++      +Q+   +LLS   N  +LQ G+ IH         ++V 
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+LV MY K G   +  +++ ++     + W A +S     G  +  L +F  M    
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              +  TF SIL + + L  +  G+Q+H+ +I++    N F  +AL+DMYAK   L+DA 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +  R++ +W  +I+  AQ    +  L  F  M Q G +P+  +L   LS CS   
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E G Q  +SM  K          +++VD+  + GC +EAE L   +    D I W+++
Sbjct: 632 SLEGG-QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTI 689

Query: 552 I 552
           I
Sbjct: 690 I 690



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 272/568 (47%), Gaps = 35/568 (6%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           ++++L  C+   +      +H  I+K   N    +  SLV+ Y K R    AR V  +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D VS+ ALI G   EG   ++I LF EMQ+ G  P++FT A  L A      + LG+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA   K   + ++FV +AL+DLY+K   +  A K+F  MPE + V++NV++  YA    
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
               LKLF  +       ++F  +T+L   AN  +L+ G+ IH+  I         +   
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMY+KCG   +A  +F  +     V W+A+I+   Q+G  EE++ LF  M   +   +
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q T  S+L A+    +L  G+ +H+ V + GF ++V   +AL+ MY K+G + D  + ++
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            M +R+++SWNA +S     G     L  F  M++ G+ P+  + +S+L +CS    +  
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE---------------------- 533
           G Q  ++   K +L        +++D+  +    ++A+                      
Sbjct: 535 GRQ-VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 534 ------------KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
                       + M Q   +P+E   +  ++ C    +LE  ++    +FK   + D  
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMF 653

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRER 609
              A+ ++YA  G  E    + +A+  R
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEALIRR 681



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 222/457 (48%), Gaps = 20/457 (4%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L++ Y+K+G +    +L+ SMVDR  +SW   + G      +     +F  M  + G
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE-G 511

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF ++L  CS     +   QVHA IIK   +    +C +L+D Y K   L+ A 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F  +  +D  ++  +IT +A+    E+A+  F +MQ  G KP++FT A  LS    LA
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+Q+H+ V K+  V ++FV +AL+D+Y+K  C+ EA  LF  +   D +++N +I 
Sbjct: 632 SLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIIC 691

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N Q  ++L  FR +           F+ +LS  +++  ++ G++          IS
Sbjct: 692 GYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGIS 751

Query: 309 E-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALNL 363
             V     +VD+  + G+F+E ++    +    + + W  ++ A     NL   E+A N 
Sbjct: 752 PTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANK 811

Query: 364 FIEM---------CRANISADQATFASILRASAELASLSLGKQLH-SFVIRSG----FMS 409
             E+           +NI A +  +  + R  + ++S  + K+   S+V  +G    F+S
Sbjct: 812 LFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVS 871

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           + +S   + +++ K   L   + + + +P+   V  N
Sbjct: 872 HDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHN 908



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      LI  Y K   L  A   FN +  R   +WT++I  Y+Q NQ  +A   F  
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  P+  T A  LSGCS   +     Q+H+ + K G+ S + + ++LVD Y K  
Sbjct: 608 MQQE-GVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCG 666

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C++ A  +F+ + ++D++++N +I G+A+ G   +A+  F  M   G  P   TF   LS
Sbjct: 667 CMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 183 A 183
           A
Sbjct: 727 A 727


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/742 (36%), Positives = 423/742 (57%), Gaps = 8/742 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K+GN+   R +F+ M DR  VSW  L+ GYS      + ++LF  M+ +G  
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEG-Y 199

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PDY T +T+++  +        +Q+HA ++K G+ +  ++CNSL+    K   L  AR 
Sbjct: 200 RPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARV 259

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M  KDSVS+N++I G    G + EA + F  MQ  G KP+  TFA+ + +   L +
Sbjct: 260 VFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMIT 248
           + L R +H   +K+    N  V  AL+   +K   + +A  LF  M  V  V S+  MI+
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  N    +++ LF  ++      + F +ST+L+V           +IH + I T    
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEK 435

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              V  +L+D + K G   +A ++F  +     + W+AM++ Y Q G  EEA  +F ++ 
Sbjct: 436 SSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLT 495

Query: 369 RANISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           R  I  ++ TF SI+ A +A  AS+  GKQ H++ I+    + +   S+L+ +YAK G++
Sbjct: 496 REGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNI 555

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + A + FK   ER++VSWN++IS  AQ+G A+  L+ FE+M +   + D+++ + V+SAC
Sbjct: 556 ESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISAC 615

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL+ +G  YFN M   + + P  EHY+ M+D+  R+G   +A  ++  MPF P   +
Sbjct: 616 AHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATV 675

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W  V+ + R+H+N+E  K AA+++  +E    AA YV +SNIYA AG W     V+K M 
Sbjct: 676 WRIVLAASRVHRNIELGKLAAEKIISLEPQHSAA-YVLLSNIYAAAGNWHEKVNVRKLMD 734

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +R V+K   YSW+E+K+K + F A D  HP ++ I  K+  L   ++  GY+PDT+   H
Sbjct: 735 KRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFH 794

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D ++E K   L +HSERLAIAF LI T    P+ ++KNLR C DCH+ IKL+S +  R I
Sbjct: 795 DIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYI 854

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRDS+RFHHFK G CSC D+W
Sbjct: 855 VVRDSNRFHHFKGGLCSCGDYW 876



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 303/575 (52%), Gaps = 15/575 (2%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A++LF+    R       L+  YS+ +Q +EA  LFV +   G S PD  T + +LS C+
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLS-PDSYTMSCVLSVCA 113

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                    QVH   +K G    L + NSLVD Y K   +   RRVF EM  +D VS+N+
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           L+TG++    N++  +LF  MQ  G++P  +T +  ++A      +A+G Q+HA VVK  
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F     V N+L+ + SK   + +AR +F  M   D VS+N MI  +  N Q  E+ + F 
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            +Q      +   F++++   A+  +L + R +H +T+ +   +   V  +L+    KC 
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353

Query: 325 RFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
             ++A  +F+ +  + S V WTAMIS Y+Q G+ ++A+NLF  M R  +  +  T+++IL
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                +       ++H+ VI++ +  +   G+ALLD + K G++ DA++ F+ +  ++++
Sbjct: 414 TVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH-CGLIEEGLQYFNS 502
           +W+A+++  AQ G+ +   K F  + + G +P+  +  S+++AC+     +E+G Q F++
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQ-FHA 528

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
              K +L       +S+V +  + G  + A ++  +   E D + W+S+I+    H    
Sbjct: 529 YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHGQ-- 585

Query: 563 FAKKAADQLFKMEKLR---DAAPYVAMSNIYAVAG 594
            AKKA +   +M+K     DA  ++ + +  A AG
Sbjct: 586 -AKKALEVFEEMQKRNLEVDAITFIGVISACAHAG 619



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 217/441 (49%), Gaps = 39/441 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+++VS N +I+G+V +G                               Q  EAF+ F
Sbjct: 264 MENKDSVSWNSMIAGHVING-------------------------------QDLEAFETF 292

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+   G+ P + TFA+++  C+       +  +H   +K G ++   +  +L+ +  K
Sbjct: 293 NNMQL-AGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351

Query: 121 IRCLDLARRVFKEMPQKDS-VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            + +D A  +F  M    S VS+ A+I+G+ + G  ++A+ LF  M+  G KP+ FT++ 
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+    +       ++HA V+KTN+ ++  V  ALLD + K   + +A K+F  +   D
Sbjct: 412 ILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKD 467

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQIGRQIH 298
            ++++ M+  YA   + +E+ K+F +L       ++F F ++++   A    ++ G+Q H
Sbjct: 468 VIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFH 527

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              I     + + V++SLV +YAK G  E A EIF        V W +MIS Y Q G  +
Sbjct: 528 AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAK 587

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SAL 417
           +AL +F EM + N+  D  TF  ++ A A    +  G+   + +I    ++      S +
Sbjct: 588 KALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCM 647

Query: 418 LDMYAKSGSLKDAIQTFKEMP 438
           +D+Y+++G L  A+     MP
Sbjct: 648 IDLYSRAGMLGKAMDIINGMP 668


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/811 (32%), Positives = 446/811 (54%), Gaps = 81/811 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N ++ N++++GY K G+L+ A ELF  M  R   SW  ++ GY Q  QF  A  +FV MR
Sbjct: 91  NVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMR 150

Query: 65  TDGGSDPDYVTFATLLSGCS----------------------EPDTANELIQ--VHADII 100
             G S P+  TF  ++  C                       +PD    L+   V    +
Sbjct: 151 QTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210

Query: 101 KFGY-------NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            F         N  +I  NS++  Y K   +D A  +FK MP++D VS+N +I+  +K G
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              EA+ + V+M   G +P   T+ ++L+A   L+ +  G+Q+H  V++     + +VA+
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           A+++LY+K  C  EA+++F  + + + VS+ V+I  +     + ES++LF +++      
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            QF  +TL+S   N +D+ +G Q+H+  + +     V V+NSL+ MYAKCG  + A+ IF
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA------------------- 374
             ++    V WT MI+AY Q GN+ +A   F +M   N+                     
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLK 510

Query: 375 -------------DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                        D  T+ ++ R  A++ +  LG Q+    ++ G + +    +A++ MY
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMY 570

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +K G + +A + F  +  +++VSWNA+I+  +Q+G  +  ++ F+D++  G +PD +S +
Sbjct: 571 SKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYV 630

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           +VLS CSH GL+EEG  YF+ M + + + P  EH++ MVD+L R+G   EA+ L+ +MP 
Sbjct: 631 AVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPM 690

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +P   +W +++++C+ H N + A+ AA  LF ++    +  Y+ ++ +YA AG+ +  +Q
Sbjct: 691 KPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDS-PGSGGYMLLAKMYADAGKSDDSAQ 749

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+K MR++G++K   YSW+E+ ++VHVF A D  HPQ   IR K++ LM+++   GY   
Sbjct: 750 VRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGY--- 806

Query: 662 TSCALHDEDEEIKVESLK---YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
                      ++ ES +   +HSE+LA+AF +++ P   PI +MKNLR C DCH  IKL
Sbjct: 807 -----------VRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKL 855

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IS +T RE  +RD  RFHHFK G CSC D+W
Sbjct: 856 ISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 232/495 (46%), Gaps = 43/495 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N   +  N ++ GY KS  +  A E+F SM +R  VSW ++I   S+  + REA  + 
Sbjct: 220 IKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMV 279

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           VDM    G  PD  T+ + L+ C+   +     Q+H  +I+   +    + +++V+ Y K
Sbjct: 280 VDMHGK-GVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAK 338

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C   A+RVF  +  ++SVS+  LI GF + G   E+++LF +M+        F  A  
Sbjct: 339 CGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATL 398

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S      DI LG Q+H+  +K+     V V+N+L+ +Y+K   +  A  +F  M E D 
Sbjct: 399 ISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI 458

Query: 241 VSYNVMITCYA----------------------WNEQY---------KESLKLFRELQFT 269
           VS+  MIT Y+                      WN            ++ LK++ ++  T
Sbjct: 459 VSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDM-LT 517

Query: 270 RFD--RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
             D       + TL    A+    ++G QI   T+    I +  V N+++ MY+KCGR  
Sbjct: 518 EKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRIS 577

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           EA++ F  LS    V W AMI+ Y Q G  ++A+ +F ++       D  ++ ++L   +
Sbjct: 578 EARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCS 637

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSG----SALLDMYAKSGSLKDAIQTFKEMPERNIV 443
               +  GK     + R     N+  G    S ++D+  ++G L +A     EMP +   
Sbjct: 638 HSGLVEEGKFYFDMMKRD---HNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTA 694

Query: 444 S-WNALISACAQNGD 457
             W AL+SAC  +G+
Sbjct: 695 EVWGALLSACKTHGN 709



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 151/611 (24%), Positives = 279/611 (45%), Gaps = 89/611 (14%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-EM 134
            A  L  C           +H+ +I  G  S++ + N+L+ +Y     L  AR + + E+
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKL-------------------------------FV 163
            + + ++ N ++ G+AK G   +A++L                               FV
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 164 EMQHLGFK-PSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDL-- 218
            M+  G   P+ FTF   + +   +G  ++AL  Q+   + K +  ++  V  AL+D+  
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVAL--QLLGLLSKFDSQDDPDVQTALVDMLV 205

Query: 219 -----------------------------YSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
                                        Y+K   V  A ++F  MPE D VS+N++I+ 
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            + + + +E+L +  ++           +++ L+  A    L+ G+Q+H Q I      +
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             VA+++V++YAKCG F+EAK +F++L   ++V WT +I  ++Q G   E++ LF +M  
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRA 385

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             ++ DQ   A+++        + LG QLHS  ++SG    V   ++L+ MYAK G+L++
Sbjct: 386 ELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQN 445

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  M ER+IVSW  +I+A +Q G+     + F+DM       + ++  ++L A   
Sbjct: 446 AELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQ 501

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD-EAEKLMAQM---PFEPDE 545
            G  E+GL+ ++ M  +  + P    Y ++       GC D  A KL  Q+     +   
Sbjct: 502 HGAEEDGLKMYSDMLTEKDVIPDWVTYVTLF-----RGCADIGANKLGDQIIGHTVKVGL 556

Query: 546 IMWSSVINSCRIH----KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           I+ +SV+N+          +  A+KA D L +    +D   + AM   Y+  G  +   +
Sbjct: 557 ILDTSVVNAVITMYSKCGRISEARKAFDFLSR----KDLVSWNAMITGYSQHGMGKQAIE 612

Query: 602 VKKAMRERGVR 612
           +   +  +G +
Sbjct: 613 IFDDILNKGAK 623


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/640 (40%), Positives = 401/640 (62%), Gaps = 37/640 (5%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           F+  I    ++   +EA+++  ++     KPS   ++  + + +    +  G++VH  + 
Sbjct: 42  FDEAIHILCQQNRLKEALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIK 97

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------- 251
            + FV  +F+ N LL++Y+K D +++++KLF EMPE D  S+N++I+ YA          
Sbjct: 98  LSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKS 157

Query: 252 ------------W---------NEQYKESLKLFRELQFTRFDRS-QFPFSTLLSVVANKL 289
                       W         +++  E+L+LFR ++ +   +S +F  S+ L+  A   
Sbjct: 158 LFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVP 217

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L+IG++IH   + T   S+  V ++L DMY KCG  EEA+ IF  +     V WTAMI 
Sbjct: 218 CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMID 277

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            Y Q G  +E  +LF ++ R+ I  ++ TF+ +L A A   S  LGK++H ++ R GF  
Sbjct: 278 RYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDP 337

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             F+ SAL+ MY+K G++  A + FKE P+ ++ SW +LI+  AQNG     ++ FE +V
Sbjct: 338 FSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLV 397

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           +SG QPD ++ + VLSAC+H GL+++GL YF+S+ ++Y L    +HYA ++D+L RSG F
Sbjct: 398 KSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQF 457

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           DEAE ++++M  +PD+ +W+S++  CRIH NL+ A++AA+ LF++E   + A YV ++NI
Sbjct: 458 DEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEP-ENPATYVTLANI 516

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG W  V++++K M +RGV K    SW+ +K  VHVF   D+ HP++ EI   +  L
Sbjct: 517 YATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKL 576

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
            + MK+EG+ PDT+  LHD ++E K ++L YHSE+LA+AF +I+TPEG+PI V KNLR C
Sbjct: 577 SKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTC 636

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIK ISKIT R+I VRDS+RFH F+DG CSCRD+W
Sbjct: 637 VDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 217/458 (47%), Gaps = 43/458 (9%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           Q+N+ +EA ++   +       P    ++TL+  C +     +  +VH  I   G+   L
Sbjct: 51  QQNRLKEALQILHQI-----DKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            I N L++ Y K   L  ++++F EMP++D  S+N LI+G+AK GL +EA  LF +M   
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPER 165

Query: 169 ----------GF----------------------KPSDFTFAAALSAGVGLADIALGRQV 196
                     G+                      K + FT ++AL+A   +  + +G+++
Sbjct: 166 DNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEI 225

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H ++++T    +  V +AL D+Y K   + EAR +F +M + D V++  MI  Y  + + 
Sbjct: 226 HGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRR 285

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           KE   LF +L  +    ++F FS +L+  AN+   ++G+++H              A++L
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           V MY+KCG    A+ +F          WT++I+ Y Q G  +EA+  F  + ++    D 
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDH 405

Query: 377 ATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
            TF  +L A A    +  G    HS   + G        + ++D+ A+SG   +A     
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIIS 465

Query: 436 EM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +M   P++ +  W +L+  C  +G+ +   ++ E + +
Sbjct: 466 KMSMKPDKFL--WASLLGGCRIHGNLKLAQRAAEALFE 501



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 186/365 (50%), Gaps = 8/365 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N+LISGY K G L  A+ LF+ M +R   SWT +I GY + ++  EA +LF
Sbjct: 131 MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+    S  +  T ++ L+  +         ++H  I++ G +S  ++ ++L D Y K
Sbjct: 191 RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGK 250

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR +F +M  +D V++ A+I  + ++G  +E   LF ++   G +P++FTF+  
Sbjct: 251 CGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGV 310

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A        LG++VH ++ +  F    F A+AL+ +YSK   +V A ++F E P+ D 
Sbjct: 311 LNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDL 370

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQ 296
            S+  +I  YA N Q  E+++ F  L  +        F  +LS  A+   +  G      
Sbjct: 371 FSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHS 430

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           I  Q  +T           ++D+ A+ G+F+EA+ I + +S       W +++      G
Sbjct: 431 IKEQYGLTHTADHYAC---IIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487

Query: 356 NLEEA 360
           NL+ A
Sbjct: 488 NLKLA 492


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/740 (37%), Positives = 421/740 (56%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K  ++   R++F +M  R  V+WT L+ GY Q     +  +LF  MR +G   P
Sbjct: 145 LVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEG-VWP 203

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA++LS  +     +   +VHA  +KFG  S + +CNSL++ Y K   ++ AR VF
Sbjct: 204 NSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 263

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +D VS+N L+ G    G + EA++LF + +      +  T+A  +     +  + 
Sbjct: 264 CGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLG 323

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
           L RQ+H+ V+K  F     V  AL+D YSK   +  A  +F  M     V S+  MI   
Sbjct: 324 LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGC 383

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     +  LF  ++      + F +ST+L+     L      QIH Q I T      
Sbjct: 384 IQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLP----PQIHAQVIKTNYECTS 439

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+  Y+K    EEA  IF  +     V W+AM++ Y Q G+ + A N+FI+M   
Sbjct: 440 IVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMH 499

Query: 371 NISADQATFASILRASAE-LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ T +S++ A A   A + LG+Q H+  I+      +   SAL+ MYA+ GS++ 
Sbjct: 500 GLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIES 559

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+   +R++VSWN+++S  AQ+G +Q  L  F  M   G + D V+ LSV+  C+H
Sbjct: 560 AQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAH 619

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YF+SM + Y + P  EHYA MVD+  R+G  DEA  L+  M F    ++W 
Sbjct: 620 AGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWR 679

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +C++HKN+E  K AA++L  +E   D+A YV +SNIY+ AG+W+   +V+K M  +
Sbjct: 680 TLLGACKVHKNVELGKLAAEKLLSLEPF-DSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+++K+KVH F A+D+ HP + +I  K+  +  ++K+EGY PDTS ALH+ 
Sbjct: 739 KVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEV 798

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            EE K   L  HSERLA+AF LI TP G+P+ + KNLR C DCH  IK++SKI  REI +
Sbjct: 799 AEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVM 858

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD SRFHHF  G CSC DFW
Sbjct: 859 RDCSRFHHFNSGVCSCGDFW 878



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 237/467 (50%), Gaps = 46/467 (9%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGV 185
           AR+ F E+P ++++  +AL    A+ G   +A+  F+++    G +         L    
Sbjct: 57  ARQAFDEIPHRNTLD-HALFD-HARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 186 GLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            + D  LG+Q+H   ++      +V V  +L+D+Y K   VV+ RK+F  MP+ + V++ 
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++T Y  +    + ++LF  ++      +   F+++LSVVA++  + +GR++H Q++  
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKF 234

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S V V NSL++MYAKCG  EEA+ +F  +     V W  +++  V  G+  EAL LF
Sbjct: 235 GCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF 294

Query: 365 IEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            +  R++I+   Q+T+A++++  A +  L L +QLHS V++ GF S     +AL+D Y+K
Sbjct: 295 HD-SRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G L +A+  F  M   +N+VSW A+I+ C QNGD       F  M + G  P+  +  +
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413

Query: 483 VLSACS-------HCGLI------------------------EEGLQYFNSMTQKYKLRP 511
           +L+A         H  +I                        EE L  F  + QK  +  
Sbjct: 414 ILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVS- 472

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC 555
               +++M+    ++G  D A  +  +M     +P+E   SSVI++C
Sbjct: 473 ----WSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 223/448 (49%), Gaps = 11/448 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +  AR +F  M  R  VSW  L+ G        EA +LF D R+   +
Sbjct: 244 NSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSS-IT 302

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                T+AT++  C+         Q+H+ ++K G++S   +  +L+D+Y K   L  A  
Sbjct: 303 MLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALD 362

Query: 130 VFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F  M   ++ VS+ A+I G  + G    A  LF  M+  G  P+DFT++  L+A V   
Sbjct: 363 IFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA-- 420

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             +L  Q+HA V+KTN+     V  ALL  YSK     EA  +F  + + D VS++ M+T
Sbjct: 421 --SLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLT 478

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAI 307
           CYA       +  +F ++       ++F  S+++   A+    + +GRQ H  +I     
Sbjct: 479 CYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCH 538

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V+++LV MYA+ G  E A+ IF   +    V W +M+S Y Q G  ++AL++F +M
Sbjct: 539 DALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQM 598

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGS 426
               I  D  TF S++   A    +  G++    + R  G    +   + ++D+Y+++G 
Sbjct: 599 EAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGK 658

Query: 427 LKDAIQTFKEM--PERNIVSWNALISAC 452
           L +A+   + M  P   +V W  L+ AC
Sbjct: 659 LDEAMSLIEGMSFPAGPMV-WRTLLGAC 685



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L+S Y + G++ +A+ +F    DR  VSW  ++ GY+Q    ++A  +F  M  + G
Sbjct: 544 SSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAE-G 602

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLA 127
            + D VTF +++ GC+      E  +    + + +G    +     +VD Y +   LD A
Sbjct: 603 IEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEA 662

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
             + + M           + G  K   N E  KL  E + L  +P D
Sbjct: 663 MSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAE-KLLSLEPFD 708


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/738 (36%), Positives = 433/738 (58%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ YVK  +L  AR++   M  +    W   +   +     +EA +LF  MR       
Sbjct: 30  LVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLN 89

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            ++ FA+L+S  +     +    +HA + K+G+ S ++I N+ V  Y K + ++   + F
Sbjct: 90  QFI-FASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFF 148

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K M  ++  S N L++GF      ++  ++ +++   GF+P+ +TF + L       D+ 
Sbjct: 149 KAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLN 208

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ +H  V+K+    +  + N+L+++Y+K      A K+FGE+PE D VS+  +IT + 
Sbjct: 209 EGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFV 268

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             E Y   L++F ++    F+ + + F ++L   ++  D+ +G+Q+H Q +  +      
Sbjct: 269 -AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 327

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  +LVDMYAK    E+A+ IF  L       WT +++ Y Q G  E+A+  FI+M R  
Sbjct: 328 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 387

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T AS L   + +A+L  G+QLHS  I++G   ++F  SAL+DMYAK G ++DA 
Sbjct: 388 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 447

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +  R+ VSWN +I   +Q+G     LK+FE M+  G  PD V+ + VLSACSH G
Sbjct: 448 VVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG 507

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LIEEG ++FNS+++ Y + P  EHYA MVDIL R+G F E E  + +M    + ++W +V
Sbjct: 508 LIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETV 567

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C++H N+EF ++AA +LF++E   D + Y+ +SN++A  G W+ V+ V+  M  RGV
Sbjct: 568 LGACKMHGNIEFGERAAMKLFELEPEID-SNYILLSNMFAAKGMWDDVTNVRALMSTRGV 626

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SWVE+  +VHVF ++D  HP+  EI  K+++L Q++   GY P+T   LH+  +
Sbjct: 627 KKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSD 686

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K E L YHSERLA+AFAL++T     I + KNLR C DCH  +K IS+IT +E+ VRD
Sbjct: 687 REKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 746

Query: 732 SSRFHHFKDGFCSCRDFW 749
            + FHHFK+G CSC++FW
Sbjct: 747 INCFHHFKNGSCSCQNFW 764



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 192/365 (52%), Gaps = 16/365 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+   A ++F  + +R  VSWT LI G+  +  +    ++F  M  + G 
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAE-GF 287

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+  TF ++L  CS     +   QVHA I+K   +    +  +LVD Y K R L+ A  
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  + ++D  ++  ++ G+A++G  E+A+K F++MQ  G KP++FT A++LS    +A 
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GRQ+H+  +K     ++FVA+AL+D+Y+K  CV +A  +F  +   D VS+N +I  
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFP----FSTLLSVVANKLDLQIGRQ-IHTQTIVT 304
           Y+ + Q  ++LK F  +     D    P    F  +LS  ++   ++ G++  ++ + + 
Sbjct: 468 YSQHGQGGKALKAFEAM----LDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIY 523

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV-PWTAMISAYVQKGNLE----E 359
                ++    +VD+  + G+F E +     +   S V  W  ++ A    GN+E     
Sbjct: 524 GITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA 583

Query: 360 ALNLF 364
           A+ LF
Sbjct: 584 AMKLF 588


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 270/743 (36%), Positives = 421/743 (56%), Gaps = 5/743 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L++ Y K  ++  AR+LF+ M  R   VSW  +I  YS      EA  LF +M   G
Sbjct: 96  VNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAG 155

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                Y TFA  L  C +       +Q+HA I+K G    + + N+LV  Y +   +  A
Sbjct: 156 VVTNTY-TFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEA 214

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F  +  KD V++N+++TGF + GL  EA++ F ++Q+   KP   +  + + A   L
Sbjct: 215 AVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRL 274

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+++HA+ +K  F  N+ V N L+D+Y+K  C+    + F  M   D +S+    
Sbjct: 275 GYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAA 334

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA N+ Y ++L+L R+LQ    D       ++L        L   ++IH  TI    +
Sbjct: 335 AGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTI-RGGL 393

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+  + N+++D+Y +CG  + A  IF ++     V WT+MIS YV  G   +AL +F  M
Sbjct: 394 SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM 453

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  D  T  SIL A   L++L  GK++H F+IR GF+      + L+DMYA+ GS+
Sbjct: 454 KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSV 513

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA + F     RN++ W A+ISA   +G  +A ++ F  M      PD ++ L++L AC
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG  +   M  +Y+L P  EHY  +VD+L R  C +EA +++  M  EP   +
Sbjct: 574 SHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV 633

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CRIH N E  + AA++L +++ L +   YV +SN++A  G+W+ V +V+  M+
Sbjct: 634 WCALLGACRIHSNKEIGEVAAEKLLELD-LDNPGNYVLVSNVFAANGRWKDVEEVRMRMK 692

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCAL 666
             G+ K    SW+E+ +K+H F + D+LHP+ ++I +K+  + +++K+E GY   T   L
Sbjct: 693 GSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVL 752

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+  EE KV+ L  HSERLAIA+ L+ T EG+PI V KNLR C DCH+   L+S+   RE
Sbjct: 753 HNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERE 812

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRD+SRFHHFKDG CSC DFW
Sbjct: 813 LIVRDASRFHHFKDGMCSCGDFW 835



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/569 (30%), Positives = 291/569 (51%), Gaps = 11/569 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G++  A  +F+ M +R+  +W  ++GGY    +   A +++ +MR  G S   Y T
Sbjct: 2   YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY-T 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM- 134
           F  LL  C   +      ++H   IK+G +S + + NSLV  Y K   ++ AR++F  M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
            + D VS+N++I+ ++  G+  EA+ LF EM   G   + +TFAAAL A    + I LG 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+HA ++K+  V +V+VANAL+ +Y +   + EA  +FG +   D V++N M+T +  N 
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            Y E+L+ F +LQ       Q    +++        L  G++IH   I     S + V N
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +L+DMYAKC         F  ++H   + WT   + Y Q     +AL L  ++    +  
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D     SIL A   L  L   K++H + IR G    V   + ++D+Y + G +  A++ F
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQ-NTIIDVYGECGIIDYAVRIF 419

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + +  +++VSW ++IS    NG A   L+ F  M ++G +PD V+L+S+LSA      ++
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLK 479

Query: 495 EGLQYFNSMTQK-YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           +G +    + +K + L     +  ++VD+  R G  ++A K+        + I+W+++I+
Sbjct: 480 KGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIFTCTK-NRNLILWTAMIS 536

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +  +H   E    AA +LF   K     P
Sbjct: 537 AYGMHGYGE----AAVELFMRMKDEKIIP 561



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 249/497 (50%), Gaps = 26/497 (5%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  +F +M ++   ++NA++ G+   G    A++++ EM+HLG     +TF   L A   
Sbjct: 11  AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGI 70

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-PEVDGVSYNV 245
           + D+  G ++H   +K      VFV N+L+ LY+K + +  ARKLF  M    D VS+N 
Sbjct: 71  VEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNS 130

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+ Y+ N    E+L LF E+       + + F+  L    +   +++G QIH   + + 
Sbjct: 131 IISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSG 190

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            + +V VAN+LV MY + G+  EA  IF NL     V W +M++ ++Q G   EAL  F 
Sbjct: 191 RVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFY 250

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           ++  A++  DQ +  SI+ AS  L  L  GK++H++ I++GF SN+  G+ L+DMYAK  
Sbjct: 251 DLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCC 310

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            +    + F  M  ++++SW    +  AQN      L+    +   G   D+  + S+L 
Sbjct: 311 CMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILL 370

Query: 486 ACSHCGLIEEGLQYFNSMTQ--KYKLR-----PKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           AC        GL     + +   Y +R     P  ++  +++D+    G  D A ++   
Sbjct: 371 AC-------RGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVRIFES 421

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           +  + D + W+S+I SC +H  L  A KA +    M++      YV + +I +      S
Sbjct: 422 IECK-DVVSWTSMI-SCYVHNGL--ANKALEVFSSMKETGLEPDYVTLVSILSAVC---S 474

Query: 599 VSQVKKAMRERG--VRK 613
           +S +KK     G  +RK
Sbjct: 475 LSTLKKGKEIHGFIIRK 491



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 150/280 (53%), Gaps = 1/280 (0%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   V++A  +F +M E    ++N M+  Y  N +   +L+++RE++        + 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL- 336
           F  LL       DL  G +IH   I     S V V NSLV +YAKC     A+++F  + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                V W ++ISAY   G   EAL LF EM +A +  +  TFA+ L+A  + + + LG 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+H+ +++SG + +V+  +AL+ MY + G + +A   F  +  ++IV+WN++++   QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
                L+ F D+  +  +PD VS++S++ A    G +  G
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 170/355 (47%), Gaps = 14/355 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N +  N LI  Y K   ++     F+ M  +  +SWT    GY+Q   + +A +L   
Sbjct: 293 DSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQ 352

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           ++ + G D D     ++L  C   +   ++ ++H   I+ G  S  ++ N+++D Y +  
Sbjct: 353 LQME-GMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECG 410

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D A R+F+ +  KD VS+ ++I+ +   GL  +A+++F  M+  G +P   T  + LS
Sbjct: 411 IIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILS 470

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L+ +  G+++H F+++  F+    ++N L+D+Y++   V +A K+F      + + 
Sbjct: 471 AVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLIL 530

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ Y  +   + +++LF  ++  +       F  LL   ++      G     ++ 
Sbjct: 531 WTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHS-----GLVNEGKSF 585

Query: 303 VTTAISEVKVA------NSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           +     E ++         LVD+  +    EEA +I  ++ +  T   W A++ A
Sbjct: 586 LEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA 640



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY KCG   +A+ IF  +S  S   W AM+  YV  G    AL ++ EM    +S D  T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F  +L+A   +  L  G ++H   I+ G  S VF  ++L+ +YAK   +  A + F  M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 439 ERN-IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
            RN +VSWN++ISA + NG     L  F +M+++G   ++ +  + L AC     I+ G+
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           Q   ++ +  ++       A +V +  R G   EA  +   +    D + W+S++  
Sbjct: 181 QIHAAILKSGRVLDVYVANA-LVAMYVRFGKMPEAAVIFGNLE-GKDIVTWNSMLTG 235


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/723 (36%), Positives = 435/723 (60%), Gaps = 12/723 (1%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R  VSW+ LI  Y+   +  EA   F DM  + G  P+   F  +   CS  +  +    
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDM-LECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 95  VHADIIKFGY-NSILIICNSLVDSYCKIRC-LDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +   ++K GY  S + +  +L+D + K    L+ A +VF  MP ++ V++  +IT F + 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G + +A+ LF++M   G+ P  FT +  +SA   +  ++LGRQ H  V+K+    +V V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 213 NALLDLYSKHDCVVE-----ARKLFGEMPEVDGVSYNVMITCYAWNEQY-KESLKLFREL 266
            +L+D+Y+K  CV +     ARK+F  MP  + +S+  +IT Y  +    +E+++LF E+
Sbjct: 184 CSLVDMYAK--CVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
              +   + F FS++L   AN  D+ +G Q++   +     S   V NSL+ MY++CG  
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           E A++ F  L   + V +  +++AY +  N EEA  LF E+  A    +  TFAS+L  +
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           + + ++  G+Q+HS +++SGF SN+   +AL+ MY++ G+++ A Q F EM + N++SW 
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           ++I+  A++G A   L++F  M+++G  P+ V+ ++VLSACSH GLI EGL++F SM  +
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           + + P+ EHYA +VD+L RSG  +EA +L+  MPF+ D ++  + + +CR+H N++  K 
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           AA+ + + +   D A Y+ +SN++A AGQWE V++++K M+ER + K    SW+E+++KV
Sbjct: 542 AAEMILEQDP-HDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F   D  HPQ  EI  +++ L  ++K+ GY P T   LHD +EE K + L  HSE++A
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIA 660

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           +A+  I+T    PI V KNLR C DCH A K  S +  +EI +RD++RFHHFKDG CSC 
Sbjct: 661 VAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCN 720

Query: 747 DFW 749
           D+W
Sbjct: 721 DYW 723



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 265/483 (54%), Gaps = 9/483 (1%)

Query: 12  LISGYVK-SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           LI  +VK +G+L +A ++F+ M DR  V+WT++I  + Q    R+A  LF+DM    G  
Sbjct: 84  LIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLS-GYV 142

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLA 127
           PD  T + ++S C+E    +   Q H  ++K G +  + +  SLVD Y K      +D A
Sbjct: 143 PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDA 202

Query: 128 RRVFKEMPQKDSVSFNALITGFAKE-GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           R+VF  MP  + +S+ A+ITG+ +  G + EAI+LF+EM     KP+ FTF++ L A   
Sbjct: 203 RKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACAN 262

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L+DI LG QV+A VVK        V N+L+ +YS+   +  ARK F  + E + VSYN +
Sbjct: 263 LSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTI 322

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA +   +E+ +LF E++      + F F++LLS  ++   +  G QIH++ + +  
Sbjct: 323 VNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGF 382

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S + + N+L+ MY++CG  E A ++F  +   + + WT+MI+ + + G    AL  F +
Sbjct: 383 KSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHK 442

Query: 367 MCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M  A +S ++ T+ ++L A + +  +S G K   S  +  G +  +   + ++D+  +SG
Sbjct: 443 MLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSG 502

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSV 483
            L++A++    MP + + +     + AC  +G+      + E ++ Q  + P +  LLS 
Sbjct: 503 HLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSN 562

Query: 484 LSA 486
           L A
Sbjct: 563 LHA 565



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 250/445 (56%), Gaps = 11/445 (2%)

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           ++D VS++ALI+ +A      EAI  F +M   GF P+++ F     A     +I+LG+ 
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 196 VHAFVVKTNFVE-NVFVANALLDLYSKHDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWN 253
           +  F++KT + E +V V  AL+D++ K +  +E A K+F  MP+ + V++ +MIT +   
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              ++++ LF ++  + +   +F  S ++S  A    L +GRQ H   + +    +V V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 314 NSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE-EALNLFIEMCR 369
            SLVDMYAKC   G  ++A+++F  +   + + WTA+I+ YVQ G  + EA+ LF+EM +
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  TF+S+L+A A L+ + LG+Q+++ V++    S    G++L+ MY++ G++++
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F  + E+N+VS+N +++A A++ +++   + F ++  +G   ++ +  S+LS  S 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G I +G Q  +S   K   +       +++ +  R G  + A ++  +M  + + I W+
Sbjct: 364 IGAIGKGEQ-IHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWT 421

Query: 550 SVINSCRIHKNLEFAKKAADQLFKM 574
           S+I     H    FA +A +   KM
Sbjct: 422 SMITGFAKHG---FATRALETFHKM 443



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 2/228 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y + GN+  AR+ F+ + ++  VS+  ++  Y++     EAF+LF ++    G+
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIE-GAGT 347

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             +  TFA+LLSG S      +  Q+H+ I+K G+ S L ICN+L+  Y +   ++ A +
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQ 407

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EM   + +S+ ++ITGFAK G    A++ F +M   G  P++ T+ A LSA   +  
Sbjct: 408 VFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467

Query: 190 IALG-RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           I+ G +   +  V+   V  +     ++DL  +   + EA +L   MP
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMP 515


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 278/774 (35%), Positives = 436/774 (56%), Gaps = 80/774 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V+ N  IS ++++G+  +A  +FNSM  R++VS+  +I GY +  +F  A  LF  
Sbjct: 43  DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M      + D  ++  +L+G                                   Y + R
Sbjct: 103 M-----PERDLFSWNVMLTG-----------------------------------YVRNR 122

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A ++F  MP+KD VS+NA+++G+A+ G  +EA ++F +M H     +  ++   L+
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH----RNSISWNGLLA 178

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V    +   R++  F  ++N+   +   N L+  Y K + + +AR+LF  MP  D +S
Sbjct: 179 AYVHNGRLKEARRL--FESQSNW--ELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVIS 234

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ YA      ++ +LF E       R  F ++ ++S       +   R+   +  
Sbjct: 235 WNTMISGYAQVGDLSQAKRLFNESPI----RDVFTWTAMVSGYVQNGMVDEARKYFDEMP 290

Query: 303 VTTAIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFAN 335
           V   IS                            +   N+++  Y + G   +A+++F  
Sbjct: 291 VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +     V W A+IS Y Q G+ EEALN+F+EM R   S++++TF+  L   A++A+L LG
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQ+H  V+++GF +  F G+ALL MY K GS  +A   F+ + E+++VSWN +I+  A++
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  FE M ++G +PD ++++ VLSACSH GLI+ G +YF SM + Y ++P  +H
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKH 530

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  M+D+L R+G  +EAE LM  MPF+P    W +++ + RIH N E  +KAA+ +FKME
Sbjct: 531 YTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKME 590

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
             +++  YV +SN+YA +G+W  V +++  MRE GV+KVT YSWVE+++K+H F+  D  
Sbjct: 591 P-QNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCF 649

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HP+ + I   +E L  +M++EGY   T   LHD +EE K   LKYHSE+LA+AF ++  P
Sbjct: 650 HPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIP 709

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G PI VMKNLR C DCH AIK ISKI GR I +RDS RFHHF +G CSC D+W
Sbjct: 710 AGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 255/546 (46%), Gaps = 77/546 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +++VS N +ISGY+++   + AR+LF+ M +R   SW +++ GY +  +  EA KLF
Sbjct: 72  MPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF 131

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQV-----HADIIKFG------------ 103
                D     D V++  +LSG ++    +E  +V     H + I +             
Sbjct: 132 -----DLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRL 186

Query: 104 ----------YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
                      N  LI  N L+  Y K   L  AR++F  MP +D +S+N +I+G+A+ G
Sbjct: 187 KEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVG 246

Query: 154 LNEEAIKLFVEMQHLGFKP--SDFTFAAALSAGV--GLAD-------------------- 189
              +A +LF E       P    FT+ A +S  V  G+ D                    
Sbjct: 247 DLSQAKRLFNE------SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAM 300

Query: 190 IALGRQVHAFVVKTNFVE-----NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           +A   Q    V+     E     N+   N ++  Y ++  + +ARKLF  MP+ D VS+ 
Sbjct: 301 LAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWA 360

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ YA N  Y+E+L +F E++      ++  FS  LS  A+   L++G+Q+H Q +  
Sbjct: 361 AIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKA 420

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              +   V N+L+ MY KCG  +EA ++F  +     V W  MI+ Y + G   +AL LF
Sbjct: 421 GFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLF 480

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS----ALLDM 420
             M +A +  D+ T   +L A +    +  G +    + R     NV   S     ++D+
Sbjct: 481 ESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRD---YNVKPTSKHYTCMIDL 537

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
             ++G L++A    + MP +    SW AL+ A   +G+ +   K+ E + +   +P +  
Sbjct: 538 LGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFK--MEPQNSG 595

Query: 480 LLSVLS 485
           +  +LS
Sbjct: 596 MYVLLS 601


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 273/738 (36%), Positives = 423/738 (57%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + + G++  A  +F  +  +  V +  ++ G+++ +   +A K FV MR D   +P
Sbjct: 75  LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDE-VEP 133

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL  C +        ++H  ++K G++  L     L + Y K R +  AR+VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVF 193

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP++D VS+N ++ G+++ G+   A+++   M     KPS  T  + L A   L  I 
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G+++H + ++  F   V +A AL+D+Y+K   +  AR LF  M E + VS+N MI  Y 
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            NE  KE++ +F+++       +       L   A+  DL+ GR IH  ++       V 
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY KC   + A  +F  L   + V W AMI  + Q G   EALN F +M    
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T+ S++ A AEL+     K +H  V+R+    NVF  +AL+DMYAK G++  A 
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M ER++ +WNA+I     +G  +A L+ FE+M +   +P+ V+ LSV+SACSH G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+E GL+ F+ M + Y + P  +HY +MVD+L R+G  +EA   + QMP +P   ++ ++
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C+IHKN+ FA+K A++LF++    D   +V ++NIY  A  WE V QV+ +M  +G+
Sbjct: 614 LGACQIHKNVNFAEKVAERLFELNP-EDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    S VE+K++VH F +    HP + +I   +E L+ ++K+ GY PDT+  L  ED 
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLILGLED- 731

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           ++K + L  HSE+LAI+F L+NT  G+ I V KNLR C DCH A K IS +TGREI VRD
Sbjct: 732 DVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRD 791

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC D+W
Sbjct: 792 MQRFHHFKNGACSCGDYW 809



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 246/501 (49%), Gaps = 10/501 (1%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           A LL  CS   +  EL  +   I K G     +    LV  +C+   +D A RVF+ + +
Sbjct: 41  ALLLERCS---SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDK 97

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K +V +  ++ GFAK    ++A+K FV M+    +P  + F   L      A++ +G+++
Sbjct: 98  KLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  +VK+ F  ++F    L ++Y+K   V EARK+F  MPE D VS+N ++  Y+ N   
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           + +L++   +       S     ++L  V+    ++IG++IH   +     S V +A +L
Sbjct: 218 RMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATAL 277

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VDMYAKCG  + A+ +F  +   + V W +MI AYVQ  N +EA+ +F +M    +    
Sbjct: 278 VDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTD 337

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            +    L A A+L  L  G+ +H   +      NV   ++L+ MY K   +  A   F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGK 397

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  R IVSWNA+I   AQNG     L  F  M     +PD+ + +SV++A +   +    
Sbjct: 398 LQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA 457

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            ++ + +  +  L        ++VD+  + G    A +L+  M  E     W+++I+   
Sbjct: 458 -KWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYG 515

Query: 557 IHKNLEFAKKAADQLF-KMEK 576
            H       KAA +LF +M+K
Sbjct: 516 THG----IGKAALELFEEMQK 532



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 5/248 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    N LIS Y K   + TA  +F  +  RT VSW  +I G++Q  +  EA   F  
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQ 428

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+      PD  T+ ++++  +E    +    +H  +++   +  + +  +LVD Y K  
Sbjct: 429 MQAR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCG 487

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            + +AR +F  M ++   ++NA+I G+   G+ + A++LF EMQ    +P+  TF + +S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVIS 547

Query: 183 A--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A    GL +  L +  H      +   ++    A++DL  +   + EA     +MP    
Sbjct: 548 ACSHSGLVEAGL-KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606

Query: 241 VS-YNVMI 247
           V+ Y  M+
Sbjct: 607 VNVYGAML 614


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 293/756 (38%), Positives = 444/756 (58%), Gaps = 14/756 (1%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            Q+    + L+SG+ + G    A+ +F  M  R  VS   L+ G  ++ Q   A K+F +M
Sbjct: 788  QDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 847

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELI----QVHADIIKFGYN-SILIICNSLVDSY 118
            +   G + D  ++  LLS  SE     E      +VHA +I+ G N + + I N LV+ Y
Sbjct: 848  KDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMY 905

Query: 119  CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
             K   +  A  VF+ M +KDSVS+N+LI+G  +   +E+A + F+ M+  G  PS+FT  
Sbjct: 906  AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLI 965

Query: 179  AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            + LS+   L  I LG Q+H   +K     +V V+NALL LY++  C  E  K+F  MPE 
Sbjct: 966  STLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY 1025

Query: 239  DGVSYNVMITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D VS+N +I   + +E    +++K F E+    +  S+  F  +LS V++    ++  QI
Sbjct: 1026 DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 1085

Query: 298  HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGN 356
            H   +      +  + N+L+  Y KCG   E ++IFA +S     V W +MIS Y+    
Sbjct: 1086 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 1145

Query: 357  LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            L +A++L   M +     D  TFA++L A A +A+L  G ++H+  IR+   S+V  GSA
Sbjct: 1146 LHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSA 1205

Query: 417  LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
            L+DMY+K G +  A + F+ MP RN+ SWN++IS  A++G  +  LK F  M+  G  PD
Sbjct: 1206 LVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 1265

Query: 477  SVS-LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
             V+ LL VLSACSH G +EEG ++F SM++ Y+L P+ EH++ MVD+L R+G  DE    
Sbjct: 1266 HVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDF 1325

Query: 536  MAQMPFEPDEIMWSSVINSC-RIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
            +  MP +P+ ++W +V+ +C R + +N E  ++AA+ L ++E  ++A  YV ++N+YA  
Sbjct: 1326 INSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEP-QNAVNYVLLANMYASG 1384

Query: 594  GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
             +WE V++ + AM+E  V+K    SWV +K  VHVF A D+LHP+ + I  K+  L ++M
Sbjct: 1385 EKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKM 1444

Query: 654  KKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCH 713
            +  GY P T  AL D + E K E L YHSE++A+AF L       PI +MKNLR C DCH
Sbjct: 1445 RDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQ-SALPIRIMKNLRVCGDCH 1503

Query: 714  AAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +A   ISKI GR+I +RDS+RFHHF+DG CSC D+W
Sbjct: 1504 SAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 181/591 (30%), Positives = 307/591 (51%), Gaps = 28/591 (4%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            N   +N LI+ YV+ G+L +A++LF+ M +R  V+W  LI GY+Q  +  EA   F DM 
Sbjct: 578  NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM- 636

Query: 65   TDGGSDPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
               G  P++  F + L  C E  P      +Q+H  I K  Y S +++CN L+  Y    
Sbjct: 637  VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS-- 694

Query: 123  CLDL---ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG----FKPSDF 175
            CLD    AR VF  +  ++S+S+N++I+ +++ G    A  LF  MQ  G    FKP+++
Sbjct: 695  CLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEY 754

Query: 176  TFAAALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
            TF + ++A     D  L    Q+ A V K+ F+++++V +AL+  +++     +A+ +F 
Sbjct: 755  TFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFE 814

Query: 234  EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ- 292
            +M   + VS N ++      +Q + + K+F E++      S   +  LLS  +    L+ 
Sbjct: 815  QMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFSVLEE 873

Query: 293  ---IGRQIHTQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
                GR++H   ++ T +++ KVA  N LV+MYAK G   +A  +F  +    +V W ++
Sbjct: 874  GRRKGREVHAH-VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 932

Query: 348  ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
            IS   Q    E+A   F+ M R        T  S L + A L  + LG+Q+H   ++ G 
Sbjct: 933  ISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGL 992

Query: 408  MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN-GDAQATLKSFE 466
             ++V   +ALL +YA++G   + ++ F  MPE + VSWN++I A + +       +K F 
Sbjct: 993  DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 1052

Query: 467  DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            +M++ G+    V+ +++LSA S   L E   Q  +++  KY L        +++    + 
Sbjct: 1053 EMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYCLSDDTAIGNALLSCYGKC 1111

Query: 527  GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL-FKMEK 576
            G  +E EK+ A+M    DE+ W+S+I S  IH   E   KA D + F M+K
Sbjct: 1112 GEMNECEKIFARMSETRDEVSWNSMI-SGYIHN--ELLHKAMDLVWFMMQK 1159



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 263/495 (53%), Gaps = 19/495 (3%)

Query: 75   TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            TF +L++       + E  ++H   IK+G+   L + N+L++ Y +I  L  A+++F EM
Sbjct: 546  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 135  PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIAL 192
              ++ V++  LI+G+ + G  +EA   F +M   GF P+ + F +AL A    G +   L
Sbjct: 606  SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665

Query: 193  GRQVHAFVVKTNFVENVFVANALLDLY-SKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G Q+H  + KT +  +V V N L+ +Y S  D   +AR +F  +   + +S+N +I+ Y+
Sbjct: 666  GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725

Query: 252  WNEQYKESLKLFRELQ-----FTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVT 304
                   +  LF  +Q     F+ F  +++ F +L++   + +D  L +  Q+  +   +
Sbjct: 726  RRGDXVSAYDLFSSMQKEGLGFS-FKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKS 784

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              + ++ V ++LV  +A+ G  ++AK IF  +   + V    ++   V++   E A  +F
Sbjct: 785  GFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF 844

Query: 365  IEMCRANISADQATFASILRASAELASLS----LGKQLHSFVIRSGFMSN-VFSGSALLD 419
             EM +  +  +  ++  +L A +E + L      G+++H+ VIR+G   N V  G+ L++
Sbjct: 845  HEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 903

Query: 420  MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            MYAKSG++ DA   F+ M E++ VSWN+LIS   QN  ++   +SF  M ++G  P + +
Sbjct: 904  MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L+S LS+C+  G I  G Q  +    K  L        +++ +   +GCF E  K+ + M
Sbjct: 964  LISTLSSCASLGWIMLGEQ-IHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 1022

Query: 540  PFEPDEIMWSSVINS 554
            P E D++ W+SVI +
Sbjct: 1023 P-EYDQVSWNSVIGA 1036



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 229/463 (49%), Gaps = 12/463 (2%)

Query: 3    NQNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
            N N V+  N L++ Y KSG +A A  +F  MV++ +VSW  LI G  Q     +A + F+
Sbjct: 891  NDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFL 950

Query: 62   DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
             MR   GS P   T  + LS C+         Q+H D +K G ++ + + N+L+  Y + 
Sbjct: 951  RMRRT-GSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAET 1009

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFA-KEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C     +VF  MP+ D VS+N++I   +  E    +A+K F+EM   G+  S  TF   
Sbjct: 1010 GCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINI 1069

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-D 239
            LSA   L+   +  Q+HA V+K    ++  + NALL  Y K   + E  K+F  M E  D
Sbjct: 1070 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 1129

Query: 240  GVSYNVMITCYAWNEQYKESLKL--FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
             VS+N MI+ Y  NE   +++ L  F   +  R D   F F+T+LS  A+   L+ G ++
Sbjct: 1130 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD--SFTFATVLSACASVATLERGMEV 1187

Query: 298  HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            H   I     S+V V ++LVDMY+KCGR + A   F  +   +   W +MIS Y + G+ 
Sbjct: 1188 HACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHG 1247

Query: 358  EEALNLFIEMCRANISADQ-ATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGS 415
            E+AL LF  M       D  A    +L A + +  +  G +   S          V   S
Sbjct: 1248 EKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFS 1307

Query: 416  ALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQ-NG 456
             ++D+  ++G L +       MP + N++ W  ++ AC + NG
Sbjct: 1308 CMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANG 1350



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 200/397 (50%), Gaps = 20/397 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R++H   +K  FV N+F++N L+++Y +   +  A+KLF EM   + V++  +I+ Y  N
Sbjct: 564 RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN 623

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--ANKLDLQIGRQIHTQTIVTTAISEVK 311
            +  E+   FR++    F  + + F + L     +     ++G QIH     T   S+V 
Sbjct: 624 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 683

Query: 312 VANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           V N L+ MY  C     +A+ +F  +   +++ W ++IS Y ++G+   A +LF  M + 
Sbjct: 684 VCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKE 743

Query: 371 NIS----ADQATFASILRASAELASLSLG--KQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +      ++ TF S++ A+       L   +Q+ + V +SGF+ +++ GSAL+  +A+ 
Sbjct: 744 GLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARF 803

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
           G   DA   F++M  RN+VS N L+    +    +A  K F +M    G   DS  +L  
Sbjct: 804 GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL-- 861

Query: 484 LSACSHCGLIEEGLQY---FNSMTQKYKLRPKKEHYAS-MVDILCRSGCFDEAEKLMAQM 539
           LSA S   ++EEG +     ++   +  L   K    + +V++  +SG   +A  +   M
Sbjct: 862 LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 921

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             E D + W+S+I+   + +N E ++ AA+   +M +
Sbjct: 922 -VEKDSVSWNSLISG--LDQN-ECSEDAAESFLRMRR 954



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%)

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           C   + +   TF S++            ++LH   I+ GF+ N+F  + L+++Y + G L
Sbjct: 536 CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 595

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F EM  RN+V+W  LIS   QNG        F DMV++G+ P+  +  S L AC
Sbjct: 596 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655

Query: 488 SHCG 491
              G
Sbjct: 656 QESG 659


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/744 (37%), Positives = 441/744 (59%), Gaps = 4/744 (0%)

Query: 4    QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +++VS  N LIS +    ++  A  +F+ M +   +SW  +I  Y+     RE+ + F  
Sbjct: 329  EDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHW 388

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR    ++ +  T ++LLS CS  D       +H  ++K G +S + ICN+L+  Y +  
Sbjct: 389  MR-HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAG 447

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
              + A  VF+ M ++D +S+N+++  + ++G   + +K+  E+  +G   +  TFA+AL+
Sbjct: 448  RSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALA 507

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A      +   + VHA ++   F + + V NAL+ +Y K   ++EA+K+   MP+ D V+
Sbjct: 508  ACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVT 567

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQT 301
            +N +I  +A NE+  E++K ++ ++      +     ++L   +   DL + G  IH   
Sbjct: 568  WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHI 627

Query: 302  IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            ++T   S+  V NSL+ MYAKCG    +  IF  L + S + W AM++A    G  EEAL
Sbjct: 628  VLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEAL 687

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             +F EM    ++ DQ +F+  L A+A LA L  G+QLH  VI+ GF S++   +A +DMY
Sbjct: 688  KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 747

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
             K G + D ++   +   R+ +SWN LISA A++G  Q   ++F +M++ G +PD V+ +
Sbjct: 748  GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 807

Query: 482  SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            S+LSAC+H GL++EGL Y++SMT+++ + P  EH   ++D+L RSG    AE  + +MP 
Sbjct: 808  SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 867

Query: 542  EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             P+++ W S++ +CRIH NLE A+K A+ L +++   D+A YV  SN+ A +G+WE V  
Sbjct: 868  PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSA-YVLYSNVCATSGKWEDVEN 926

Query: 602  VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            ++K M    ++K  A SWV+LK KVH F   ++ HPQ + I  K+  LM+  K+ GY PD
Sbjct: 927  LRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPD 986

Query: 662  TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            TS ALHD DEE K  +L  HSERLA+AF LINTPE S + + KNLR C DCH+  K +S 
Sbjct: 987  TSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSG 1046

Query: 722  ITGREITVRDSSRFHHFKDGFCSC 745
            I GR+I +RD  RFHHF  G CSC
Sbjct: 1047 IVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/487 (31%), Positives = 264/487 (54%), Gaps = 2/487 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N     TN LI+ Y K GN+  AR +F+ M  R   SW+ ++ GY +   + EA  LF  
Sbjct: 126 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 185

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M   G  +P+    A+L++ CS     A+E  QVH  ++K G    + +  +LV  Y  I
Sbjct: 186 MWGLG-VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSI 244

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  A+++F+EMP  + VS+ +L+ G++  G   E + ++  M+  G   +  TFA   
Sbjct: 245 GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT 304

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S+   L D  LG QV   +++  F ++V VAN+L+ ++S    V EA  +F  M E D +
Sbjct: 305 SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 364

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N MI+ YA +   +ESL+ F  ++    + +    S+LLSV ++  +L+ GR IH   
Sbjct: 365 SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 424

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +     S V + N+L+ +Y++ GR E+A+ +F  ++    + W +M++ YVQ G   + L
Sbjct: 425 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 484

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +  E+ +     +  TFAS L A +    L   K +H+ +I +GF   +  G+AL+ MY
Sbjct: 485 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 544

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + +A +  + MP+ + V+WNALI   A+N +    +K+++ + + G   + ++++
Sbjct: 545 GKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 604

Query: 482 SVLSACS 488
           SVL ACS
Sbjct: 605 SVLGACS 611



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 246/487 (50%), Gaps = 25/487 (5%)

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L G SE  +      +HA  I    N  +   N+L++ Y K   ++ AR VF EM  ++ 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA-LGRQVHA 198
            S++ +++G+ + GL EEA+ LF +M  LG +P+ F  A+ ++A      +A  G QVH 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           FVVKT  + +V+V  AL+  Y     V  A+KLF EMP+ + VS+  ++  Y+ +    E
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
            L +++ ++      +Q  F+T+ S      D  +G Q+    I       V VANSL+ 
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 340

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           M++     EEA  +F +++    + W AMISAY   G   E+L  F  M   +   +  T
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
            +S+L   + + +L  G+ +H  V++ G  SNV   + LL +Y+++G  +DA   F+ M 
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---------- 488
           ER+++SWN++++   Q+G     LK   +++Q G   + V+  S L+ACS          
Sbjct: 461 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI 520

Query: 489 -HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            H  +I  G   F  +              ++V +  + G   EA+K++  MP +PD + 
Sbjct: 521 VHALIIVAGFHDFLIVGN------------ALVTMYGKLGMMMEAKKVLQTMP-QPDRVT 567

Query: 548 WSSVINS 554
           W+++I  
Sbjct: 568 WNALIGG 574


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 293/791 (37%), Positives = 450/791 (56%), Gaps = 56/791 (7%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +N LI+ YV+ G+L +A++LF+ M +R  V+W  LI GY+Q  +  EA   F DM 
Sbjct: 133 NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM- 191

Query: 65  TDGGSDPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
              G  P++  F + L  C E  P      +Q+H  I K  Y S +++CN L+  Y    
Sbjct: 192 VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS-- 249

Query: 123 CLDLA---RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG----FKPSD- 174
           CLD A   R VF  +  ++S+S+N++I+ +++ G    A  LF  MQ  G    FKP+D 
Sbjct: 250 CLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDA 309

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSK------------ 221
           F+  + L  G        GR+VHA V++T   +N V + N L+++Y+K            
Sbjct: 310 FSEFSVLEEGR-----RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 364

Query: 222 -------------------HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE-QYKESLK 261
                              ++C  +A ++F  MPE D VS+N +I   + +E    +++K
Sbjct: 365 LMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 424

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
            F ++    +  S+  F  +LS V++    ++  QIH   +      +  + N+L+  Y 
Sbjct: 425 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 484

Query: 322 KCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
           KCG   E ++IFA +S     V W +MIS Y+    L +A++L   M +     D  TFA
Sbjct: 485 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 544

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           +IL A A +A+L  G ++H+  IR+   S+V  GSAL+DMY+K G +  A + F+ MP R
Sbjct: 545 TILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 604

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           N+ SWN++IS  A++G  +  LK F  M+  G  PD V+ + VLSACSH G +EEG ++F
Sbjct: 605 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHF 664

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIH- 558
            SM++ Y+L P+ EH++ MVD+L R+G  DE    +  MP +P+ ++W +V+ + CR + 
Sbjct: 665 KSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANG 724

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
           +N E  ++AA+ L ++E  ++A  YV ++N+YA   +WE V++ + AM+E  V+K    S
Sbjct: 725 RNTELGRRAAEMLLELEP-QNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCS 783

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
           WV +K  VHVF A D+LHP+ + I  K+  L ++M+  GY P T  AL D + E K E L
Sbjct: 784 WVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELL 843

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
            YHSE++A+AF L       PI +MKNLR C DCH+A   ISKI GR+I +RDS+RFHHF
Sbjct: 844 SYHSEKIAVAFVLTRQ-SALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHF 902

Query: 739 KDGFCSCRDFW 749
           +DG CSC D+W
Sbjct: 903 EDGKCSCGDYW 913



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/607 (24%), Positives = 274/607 (45%), Gaps = 79/607 (13%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF +L++       + E  ++H   IK+G+   L + N+L++ Y +I  L  A+++F EM
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG--VGLADIAL 192
             ++ V++  LI+G+ + G  +EA   F +M   GF P+ + F +AL A    G +   L
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLY-SKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           G Q+H  + KT +  +V V N L+ +Y S  D   +AR +F  +   + +S+N +I+ Y+
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                  +  LF  +Q      S  P          +   + GR++H   ++ T +++ K
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAH-VIRTGLNDNK 339

Query: 312 VA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ---------------- 353
           VA  N LV+MYAK G   +A  +F  +    +V W ++IS   Q                
Sbjct: 340 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPE 399

Query: 354 ----------------KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
                           + ++ +A+  F++M R      + TF +IL A + L+   +  Q
Sbjct: 400 YDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ 459

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNG 456
           +H+ V++     +   G+ALL  Y K G + +  + F  M E R+ VSWN++IS    N 
Sbjct: 460 IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNE 519

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY----------------- 499
                +     M+Q G + DS +  ++LSAC+    +E G++                  
Sbjct: 520 LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGS 579

Query: 500 -----------FNSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFE---P 543
                       +  ++ ++L P +  Y+  SM+    R G  ++A KL  +M  +   P
Sbjct: 580 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 639

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV----AMSNIYAVAGQWESV 599
           D + +  V+++C    ++ F ++  +    M ++   +P V     M ++   AG+ + V
Sbjct: 640 DHVTFVGVLSAC---SHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 696

Query: 600 SQVKKAM 606
                +M
Sbjct: 697 GDFINSM 703



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 170/354 (48%), Gaps = 5/354 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKN-QFREAFKL 59
           M  +++VS N LISG  ++     A E+F+ M +   VSW  +IG  S       +A K 
Sbjct: 366 MVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKY 425

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F+ M   GG     VTF  +LS  S         Q+HA ++K+  +    I N+L+  Y 
Sbjct: 426 FLQM-MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 484

Query: 120 KIRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           K   ++   ++F  M + +D VS+N++I+G+    L  +A+ L   M   G +   FTFA
Sbjct: 485 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 544

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             LSA   +A +  G +VHA  ++     +V V +AL+D+YSK   +  A + F  MP  
Sbjct: 545 TILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 604

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQI 297
           +  S+N MI+ YA +   +++LKLF  +           F  +LS  ++   ++ G    
Sbjct: 605 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHF 664

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV-PWTAMISA 350
            + + V      V+  + +VD+  + G+ +E  +   ++     V  W  ++ A
Sbjct: 665 KSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 718



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%)

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           C   + +   TF S++            ++LH   I+ GF+ N+F  + L+++Y + G L
Sbjct: 91  CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 150

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F EM  RN+V+W  LIS   QNG        F DMV++G+ P+  +  S L AC
Sbjct: 151 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 210

Query: 488 SHCG 491
              G
Sbjct: 211 QESG 214


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/682 (38%), Positives = 412/682 (60%), Gaps = 5/682 (0%)

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            D VT   +LS     D  +   Q+HA +IK  +  ++ + NSL++ Y K   +  A + F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL---SAGVGLA 188
               P+ D +S+N +I+ +A+  L  EAI  F ++   G KP  FT A+ L   S G    
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
               LG QVH + +K   + + FV+ AL+DLYSK   + EA  L     + D  S+N ++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             Y  + + +++L+ F  +        +   +T +      ++L+ G+QI    I     +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            ++ V++ ++DMY KCG    A E+F  +S    V WT MIS Y++ G+ + AL+++  M 
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192

Query: 369  RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             + +  D+ TFA++++AS+ L +L  GKQ+H+ V++  +  + F G++L+DMY K GS++
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252

Query: 429  DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            DA + F++M  R +V WNA++   AQ+G     L  F  M  +G QPD V+ + VLSACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H GL  E  +YF++M + Y + P+ EHY+ +VD L R+G   EAE ++A MPF+    M+
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMY 1372

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             +++ +CR   + E AK+ AD+L  ++   D++ YV +SNIYA + QW+ V+  +  M+ 
Sbjct: 1373 RALLGACRTKGDAETAKRVADKLLALDP-SDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG-YKPDTSCALH 667
            + V+K   +SW+++K+KVH+F  +D  HPQ + I  KIE+LM+ +++EG Y PDT   L 
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            D +EE K  +L YHSE+LAIAF LI+TP  + I V+KNLR C DCH+AIK ISK+T REI
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
             +RD++RFHHF++G CSC D+W
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 178/704 (25%), Positives = 306/704 (43%), Gaps = 103/704 (14%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-----KNQFREAFKLFVDM 63
            TN LI+ Y K G+L +AR++F+   DR  V+W  ++  Y+Q          E F+LF  +
Sbjct: 649  TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSYC 119
            R  G S    +T  TL         +   +Q    VH   +K G+   L +  +LV+ YC
Sbjct: 709  REFGFS----ITRLTLAPLLKLCLLSG-FVQVSETVHGYAVKIGFELDLFVSGALVNIYC 763

Query: 120  KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            K   +  AR +F +MP++D+V +N ++  + +    +EA++ F      GF P DF+   
Sbjct: 764  KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFP-DFSNLH 822

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             +  GV  +D++  R+ HA  VK                         A K+F      +
Sbjct: 823  CVIGGVN-SDVSNNRKRHAEQVK-----------------------AYAMKMFPFDQGSN 858

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              ++N  +T +    Q   ++  F+ L  +           +LS      DL +G QIH 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 300  QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE- 358
              I ++    V V+NSL++MY+K G    A++ F N   +  + W  MIS+Y Q  NLE 
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN-NLEM 977

Query: 359  EALNLFIEMCRANISADQATFASILRASA---ELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            EA+  F ++ R  +  DQ T AS+LRA +   E    +LG Q+H + I+ G +++ F  +
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 416  ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            AL+D+Y+K G + +A        + ++ SWNA++    ++  ++  L+ F  M + G   
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 476  DSVSLLSVLSACS-----------------------------------HCGLIEEGLQYF 500
            D ++L + + A                                      CG +   L+ F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 501  NSMTQKYKLRPKKEHYASMVDILCRSGCFDEA---EKLMAQMPFEPDEIMWSSVINSCRI 557
              ++     RP +  + +M+     +G  D A     LM     +PDE  ++++I +   
Sbjct: 1158 GEIS-----RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 558  HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
               LE  K+    + K++   D     ++ ++Y   G   SV    +  R+  VRKV  +
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG---SVQDAYRVFRKMDVRKVVFW 1269

Query: 618  SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + + L    H     DE             NL + M+  G +PD
Sbjct: 1270 NAMLLGLAQHGHV--DE-----------ALNLFRTMQSNGIQPD 1300



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 239/486 (49%), Gaps = 49/486 (10%)

Query: 94   QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            + HA I+  G      + N+L+  Y K   L  AR+VF +   +D V++N+++  +A+  
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 154  LNE-----EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
             +      E  +LF  ++  GF  +  T A  L   +    + +   VH + VK  F  +
Sbjct: 692  DSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELD 751

Query: 209  VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
            +FV+ AL+++Y K+  V +AR LF +MPE D V +NVM+  Y  N    E+L+ F     
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811

Query: 269  TRFDRSQFP-FSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
            + F    FP FS L  V+     D+   R+ H + +   A+              K   F
Sbjct: 812  SGF----FPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAM--------------KMFPF 853

Query: 327  EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
            ++   IFA         W   ++ ++  G +  A++ F  + R+ I  D  T   IL A+
Sbjct: 854  DQGSNIFA---------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904

Query: 387  AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
                 L LG+Q+H+ VI+S F   V   ++L++MY+K+G +  A +TF   PE +++SWN
Sbjct: 905  VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964

Query: 447  ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
             +IS+ AQN      + +F D+++ G +PD  +L SVL ACS     +EG +YF   +Q 
Sbjct: 965  TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG-EYFTLGSQV 1020

Query: 507  YKLRPK----KEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV----INSCR 556
            +    K     + + S  ++D+  + G  DEAE L+    ++ D   W+++    I S +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL-HGKYDFDLASWNAIMFGYIKSNK 1079

Query: 557  IHKNLE 562
              K LE
Sbjct: 1080 SRKALE 1085



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 1/168 (0%)

Query: 16   YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
            Y+K G++  A ELF  +     V+WT +I GY +      A  ++  MR  G   PD  T
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG-VQPDEYT 1202

Query: 76   FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            FATL+   S      +  Q+HA+++K  Y+    +  SLVD YCK   +  A RVF++M 
Sbjct: 1203 FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262

Query: 136  QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +  V +NA++ G A+ G  +EA+ LF  MQ  G +P   TF   LSA
Sbjct: 1263 VRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 176/389 (45%), Gaps = 41/389 (10%)

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           + + +AD+ LG++ HA +V +  + + ++ N L+ +YSK   +  AR++F +  + D V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 243 YNVMITCYAW--NEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVVANKLD------LQI 293
           +N ++  YA   +  Y+  L+ FR     R    +F FS T L++            +Q+
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLR----EFGFSITRLTLAPLLKLCLLSGFVQV 735

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +      ++ V+ +LV++Y K G   +A+ +F  +     V W  M+ AYV+
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               +EAL  F    R+    D +    ++      + +S  ++ H+  +++        
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKA-------- 845

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
                           A++ F      NI +WN  ++     G   A +  F+ +++S  
Sbjct: 846 ---------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
             DSV+L+ +LSA      ++ G Q  +++  K    P      S++++  ++G    AE
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           K     P E D I W+++I+S     NLE
Sbjct: 950 KTFINSP-ELDLISWNTMISS-YAQNNLE 976



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 36/250 (14%)

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R++  +A L LGK+ H+ ++ SG + + +  + L+ MY+K GSL  A Q F +  +R++V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 444 SWNALISACAQNGDAQ-----ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +WN++++A AQ  D+         + F  + + G+    ++L  +L  C   G ++    
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---- 734

Query: 499 YFNSMTQKYKLRPKKEH----YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +     Y ++   E       ++V+I C+ G   +A  L  +MP E D ++W+ ++  
Sbjct: 735 -VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVML-- 790

Query: 555 CRIHKNLEFAKKAADQLFKMEKLR------DAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
                     K   +  F+ E LR       +  +   SN++ V G    V+      R+
Sbjct: 791 ----------KAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIG---GVNSDVSNNRK 837

Query: 609 RGVRKVTAYS 618
           R   +V AY+
Sbjct: 838 RHAEQVKAYA 847



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  Y K G++  A  +F  M  R  V W  ++ G +Q     EA  LF  M+++ G  P
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSN-GIQP 1299

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRV 130
            D VTF  +LS CS     +E  +    + K +G    +   + LVD+  +   +  A  V
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359

Query: 131  FKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
               MP K S S + AL+     +G  E A ++  ++  L   PSD
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL--LALDPSD 1402


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/682 (38%), Positives = 412/682 (60%), Gaps = 5/682 (0%)

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            D VT   +LS     D  +   Q+HA +IK  +  ++ + NSL++ Y K   +  A + F
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL---SAGVGLA 188
               P+ D +S+N +I+ +A+  L  EAI  F ++   G KP  FT A+ L   S G    
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
               LG QVH + +K   + + FV+ AL+DLYSK   + EA  L     + D  S+N ++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             Y  + + +++L+ F  +        +   +T +      ++L+ G+QI    I     +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            ++ V++ ++DMY KCG    A E+F  +S    V WT MIS Y++ G+ + AL+++  M 
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192

Query: 369  RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             + +  D+ TFA++++AS+ L +L  GKQ+H+ V++  +  + F G++L+DMY K GS++
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252

Query: 429  DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            DA + F++M  R +V WNA++   AQ+G     L  F  M  +G QPD V+ + VLSACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H GL  E  +YF++M + Y + P+ EHY+ +VD L R+G   EAE ++A MPF+    M+
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMY 1372

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             +++ +CR   + E AK+ AD+L  ++   D++ YV +SNIYA + QW+ V+  +  M+ 
Sbjct: 1373 RALLGACRTKGDAETAKRVADKLLALDP-SDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG-YKPDTSCALH 667
            + V+K   +SW+++K+KVH+F  +D  HPQ + I  KIE+LM+ +++EG Y PDT   L 
Sbjct: 1432 KNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLL 1491

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            D +EE K  +L YHSE+LAIAF LI+TP  + I V+KNLR C DCH+AIK ISK+T REI
Sbjct: 1492 DVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREI 1551

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
             +RD++RFHHF++G CSC D+W
Sbjct: 1552 VLRDANRFHHFRNGTCSCGDYW 1573



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 178/704 (25%), Positives = 306/704 (43%), Gaps = 103/704 (14%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-----KNQFREAFKLFVDM 63
            TN LI+ Y K G+L +AR++F+   DR  V+W  ++  Y+Q          E F+LF  +
Sbjct: 649  TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSYC 119
            R  G S    +T  TL         +   +Q    VH   +K G+   L +  +LV+ YC
Sbjct: 709  REFGFS----ITRLTLAPLLKLCLLSG-FVQVSETVHGYAVKIGFELDLFVSGALVNIYC 763

Query: 120  KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            K   +  AR +F +MP++D+V +N ++  + +    +EA++ F      GF P DF+   
Sbjct: 764  KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXP-DFSNLH 822

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             +  GV  +D++  R+ HA  VK                         A K+F      +
Sbjct: 823  CVIGGVN-SDVSNNRKRHAEQVK-----------------------AYAMKMFPFDQGSN 858

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              ++N  +T +    Q   ++  F+ L  +           +LS      DL +G QIH 
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 300  QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE- 358
              I ++    V V+NSL++MY+K G    A++ F N   +  + W  MIS+Y Q  NLE 
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN-NLEM 977

Query: 359  EALNLFIEMCRANISADQATFASILRASA---ELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            EA+  F ++ R  +  DQ T AS+LRA +   E    +LG Q+H + I+ G +++ F  +
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 416  ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            AL+D+Y+K G + +A        + ++ SWNA++    ++  ++  L+ F  M + G   
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 476  DSVSLLSVLSACS-----------------------------------HCGLIEEGLQYF 500
            D ++L + + A                                      CG +   L+ F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 501  NSMTQKYKLRPKKEHYASMVDILCRSGCFDEA---EKLMAQMPFEPDEIMWSSVINSCRI 557
              ++     RP +  + +M+     +G  D A     LM     +PDE  ++++I +   
Sbjct: 1158 GEIS-----RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 558  HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
               LE  K+    + K++   D     ++ ++Y   G   SV    +  R+  VRKV  +
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG---SVQDAYRVFRKMDVRKVVFW 1269

Query: 618  SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + + L    H     DE             NL + M+  G +PD
Sbjct: 1270 NAMLLGLAQHGHV--DE-----------ALNLFRTMQSNGIQPD 1300



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 240/487 (49%), Gaps = 51/487 (10%)

Query: 94   QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            + HA I+  G      + N+L+  Y K   L  AR+VF +   +D V++N+++  +A+  
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 154  LNE-----EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
             +      E  +LF  ++  GF  +  T A  L   +    + +   VH + VK  F  +
Sbjct: 692  DSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELD 751

Query: 209  VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
            +FV+ AL+++Y K+  V +AR LF +MPE D V +NVM+  Y  N    E+L+ F     
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF----- 806

Query: 269  TRFDRSQF--PFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
            + F RS F   FS L  V+     D+   R+ H + +   A+              K   
Sbjct: 807  SAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAM--------------KMFP 852

Query: 326  FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            F++   IFA         W   ++ ++  G +  A++ F  + R+ I  D  T   IL A
Sbjct: 853  FDQGSNIFA---------WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSA 903

Query: 386  SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            +     L LG+Q+H+ VI+S F   V   ++L++MY+K+G +  A +TF   PE +++SW
Sbjct: 904  AVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISW 963

Query: 446  NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            N +IS+ AQN      + +F D+++ G +PD  +L SVL ACS     +EG +YF   +Q
Sbjct: 964  NTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG-EYFTLGSQ 1019

Query: 506  KYKLRPK----KEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV----INSC 555
             +    K     + + S  ++D+  + G  DEAE L+    ++ D   W+++    I S 
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL-HGKYDFDLASWNAIMFGYIKSN 1078

Query: 556  RIHKNLE 562
            +  K LE
Sbjct: 1079 KSRKALE 1085



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 1/168 (0%)

Query: 16   YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
            Y+K G++  A ELF  +     V+WT +I GY +      A  ++  MR  G   PD  T
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG-VQPDEYT 1202

Query: 76   FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            FATL+   S      +  Q+HA+++K  Y+    +  SLVD YCK   +  A RVF++M 
Sbjct: 1203 FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262

Query: 136  QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +  V +NA++ G A+ G  +EA+ LF  MQ  G +P   TF   LSA
Sbjct: 1263 VRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 176/389 (45%), Gaps = 41/389 (10%)

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           + + +AD+ LG++ HA +V +  + + ++ N L+ +YSK   +  AR++F +  + D V+
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 243 YNVMITCYAW--NEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVVANKLD------LQI 293
           +N ++  YA   +  Y+  L+ FR     R    +F FS T L++            +Q+
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLR----EFGFSITRLTLAPLLKLCLLSGFVQV 735

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +      ++ V+ +LV++Y K G   +A+ +F  +     V W  M+ AYV+
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               +EAL  F    R+    D +    ++      + +S  ++ H+  +++        
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKA-------- 845

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
                           A++ F      NI +WN  ++     G   A +  F+ +++S  
Sbjct: 846 ---------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
             DSV+L+ +LSA      ++ G Q  +++  K    P      S++++  ++G    AE
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           K     P E D I W+++I+S     NLE
Sbjct: 950 KTFINSP-ELDLISWNTMISS-YAQNNLE 976



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 93/180 (51%), Gaps = 15/180 (8%)

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R++  +A L LGK+ H+ ++ SG + + +  + L+ MY+K GSL  A Q F +  +R++V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 444 SWNALISACAQNGDAQ-----ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +WN++++A AQ  D+         + F  + + G+    ++L  +L  C   G ++    
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQ---- 734

Query: 499 YFNSMTQKYKLRPKKEH----YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +     Y ++   E       ++V+I C+ G   +A  L  +MP E D ++W+ ++ +
Sbjct: 735 -VSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  Y K G++  A  +F  M  R  V W  ++ G +Q     EA  LF  M+++ G  P
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSN-GIQP 1299

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRV 130
            D VTF  +LS CS     +E  +    + K +G    +   + LVD+  +   +  A  V
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359

Query: 131  FKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
               MP K S S + AL+     +G  E A ++  ++  L   PSD
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL--LALDPSD 1402


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/670 (38%), Positives = 395/670 (58%), Gaps = 33/670 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+++  Y K+  L   +++F  MP +D VS+N  I+G+A  G   +A++++ + ++    
Sbjct: 75  NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
             +  TF+  L        + LGRQ++  ++K  F  +VFV + L+D+Y+K   + +A++
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194

Query: 231 LFGEMPEV-------------------------------DGVSYNVMITCYAWNEQYKES 259
            F EMPE                                D +S+ +MIT    N   +E+
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L +FRE++   F   QF F ++L+   + L L  G+QIH   I T     V V ++LVDM
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KC   + A+ +F  +   + + WTAM+  Y Q G  EEA+ +F EM R  +  D  T 
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG +S +   +AL+ +Y K GS +++ + F EM  
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           R+ VSW AL++  AQ G A  T+  FE M+  G +PD V+ + VLSACS  GL+E+GLQY
Sbjct: 435 RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F SM +++ + P  +H   ++D+L R+G  +EA   +  MP  PD + W+++++SCR+H 
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           ++E  K AAD L  +E  ++ A YV +S++YA  G+W+ V+Q+++ MR++ VRK   YSW
Sbjct: 555 DMEIGKWAADSLIALEP-QNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSW 613

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ K KVHVF+A+D+  P   +I  ++E L  +M +EGY PD S  LHD +E  K++ L 
Sbjct: 614 IKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLN 673

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           +HSE+LAIAF LI  P G PI V+KNLR C DCH A K ISKIT REI VRD+ RFH FK
Sbjct: 674 HHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFK 733

Query: 740 DGFCSCRDFW 749
           DG CSC DFW
Sbjct: 734 DGTCSCGDFW 743



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 266/520 (51%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  N  S N ++S Y K G L+  +++FN M  R  VSW + I GY+      +A +++
Sbjct: 66  IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  D   + + +TF+T+L  CS+    +   Q++  I+KFG+ S + + + LVD Y K
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 121 IRCLDLARRVFKEMPQK-------------------------------DSVSFNALITGF 149
           +  +  A+R F EMP++                               DS+S+  +ITG 
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  EA+ +F EM+  GF    FTF + L+A   L  +  G+Q+HA+V++T+  +NV
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+YSK   +  A  +F  MP+ + +S+  M+  Y  N   +E++K+F E+Q  
Sbjct: 306 FVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRN 365

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             +   F   +++S  AN   L+ G Q H + +V+  IS + V+N+L+ +Y KCG  E +
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  ++    V WTA+++ Y Q G   E + LF  M    +  D  TF  +L A +  
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485

Query: 390 ASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G Q   S +   G M  V   + ++D+  ++G L++A      MP   ++V W  
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWAT 545

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C  +GD +    + + ++    Q P S  LLS L A
Sbjct: 546 LLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYA 585



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 217/414 (52%), Gaps = 38/414 (9%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P  F     ++A   L ++A    V   + + N    +F  N +L +YSK   + + ++
Sbjct: 37  QPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN----LFSWNTILSVYSKLGLLSQMQQ 92

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKL 289
           +F  MP  DGVS+N+ I+ YA      +++++++  L+    + ++  FST+L + +   
Sbjct: 93  IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK--------------------------- 322
            + +GRQI+ Q +     S+V V + LVDMY K                           
Sbjct: 153 CVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMIT 212

Query: 323 ----CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
               CG  EE++ +F  L    ++ WT MI+  +Q G   EAL++F EM  A  + DQ T
Sbjct: 213 GLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFT 272

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F S+L A   L +L  GKQ+H++VIR+    NVF GSAL+DMY+K  S+K A   FK MP
Sbjct: 273 FGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           ++N++SW A++    QNG ++  +K F +M ++G +PD  +L SV+S+C++   +EEG Q
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ 392

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            F+       L        +++ +  + G  + + +L  +M    DE+ W++++
Sbjct: 393 -FHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIR-DEVSWTALL 444



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 159/366 (43%), Gaps = 76/366 (20%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF---- 333
           +++LL +     +    +++H   + T    E  ++N+L+  Y K G    A  +F    
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 334 -ANLSHIST--------------------------VPWTAMISAYVQKGNLEEALNLFIE 366
             NL   +T                          V W   IS Y   G+  +A+ ++  
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 367 MCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M + A ++ ++ TF+++L   ++   + LG+Q++  +++ GF S+VF GS L+DMY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 426 SLKDAIQTFKEMPERNIV-------------------------------SWNALISACAQ 454
            + DA + F EMPERN+V                               SW  +I+   Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG  +  L  F +M  +G+  D  +  SVL+AC     + EG Q        Y +R   +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQ-----IHAYVIRTDHK 302

Query: 515 HY----ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
                 +++VD+  +      AE +  +MP + + I W++++     +    F+++A   
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAMLVG---YGQNGFSEEAVKI 358

Query: 571 LFKMEK 576
            F+M++
Sbjct: 359 FFEMQR 364



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +S+    +AS+L+   E  + +  K+LH  ++++      F  + L+  Y K G+L  A 
Sbjct: 1   MSSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAH 60

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP--DSVSLLSVLSACSH 489
             F  +P+ N+ SWN ++S  ++ G      + F  M      P  D VS    +S  ++
Sbjct: 61  HVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLM------PFRDGVSWNLAISGYAN 114

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            G   + ++ +  M +   +   +  +++M+ +  +  C D   ++  Q+
Sbjct: 115 YGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQI 164


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/742 (35%), Positives = 426/742 (57%), Gaps = 10/742 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YVK G+L   R +F+ + +     W ++I  YS    + E+  LF  M  + G  P
Sbjct: 191 LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQM-LELGIKP 249

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC---KIRCLDLAR 128
           +  TF+++L   +      E  QVH  I K G+NS   + NSL+  Y    K+RC   A+
Sbjct: 250 NSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRC---AQ 306

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F E+  +D +S+N++I+G+ K GL++  I++F++M   G      T      A   + 
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366

Query: 189 DIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            + LG+ +H++ +K   ++  V   N LLD+YSK   +  A ++F  M E   VS+  MI
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T Y        ++KLF E++        +  +++L+  A   +L+ G+ +H         
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +   V+N+L DMYAKCG  ++A ++F+++     + W  MI  Y +     EAL LF EM
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R +   D  T A IL A A LA+L  G+++H + +R+G+  + +  +A++DMY K G L
Sbjct: 547 QRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLL 605

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F  +P +++VSW  +I+    +G     + +F  M  +G +PD VS +S+L AC
Sbjct: 606 VLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYAC 665

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG + FN M ++ ++ P  EHYA MVD+L R+G   +A K +  MP +PD  +
Sbjct: 666 SHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATI 725

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++  CRIH +++ A+K A+++F++E   +   YV ++NIYA A +WE V +++K + 
Sbjct: 726 WGALLCGCRIHHDVKLAEKVAERIFELEP-ENTGYYVLLANIYAEAEKWEEVQKLRKKIG 784

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +RG++K    SW+E+K K+++F A D   PQ  +I   ++ L  +MK+EGY P T+ AL 
Sbjct: 785 QRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALL 844

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF ++N P G  I V KNLR C DCH   K +SK   REI
Sbjct: 845 NADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREI 904

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDSSRFHHFKDG CSCR +W
Sbjct: 905 ILRDSSRFHHFKDGSCSCRGYW 926



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 242/488 (49%), Gaps = 16/488 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NTV  N LIS Y     +  A++LF+ + DR  +SW  +I GY +        ++F+ M 
Sbjct: 286 NTV-VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKML 344

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
              G D D  T   +   C+   T      +H+  IK    +  +   N+L+D Y K   
Sbjct: 345 V-FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGD 403

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ A RVF+ M +K  VS+ ++ITG+ +EGL++ AIKLF EM+  G  P  +   + L+A
Sbjct: 404 LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNA 463

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                ++  G+ VH ++ + N   N FV+NAL D+Y+K   + +A  +F  M + D +S+
Sbjct: 464 CAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISW 523

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST----LLSVVANKLDLQIGRQIHT 299
           N MI  Y  N    E+L LF E+Q     R   P  T    +L   A+   L  GR+IH 
Sbjct: 524 NTMIGGYTKNSLPNEALTLFAEMQ-----RESKPDGTTVACILPACASLAALDKGREIHG 578

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +      +  V N++VDMY KCG    A+ +F  + +   V WT MI+ Y   G   E
Sbjct: 579 YALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSE 638

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALL 418
           A+N F +M    I  D+ +F SIL A +    L  G ++ + + +      N+   + ++
Sbjct: 639 AINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMV 698

Query: 419 DMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           D+ A++G+L  A +  K MP + +   W AL+  C  + D +   K  E + +   +P++
Sbjct: 699 DLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFE--LEPEN 756

Query: 478 VSLLSVLS 485
                +L+
Sbjct: 757 TGYYVLLA 764



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 30/338 (8%)

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I  + + G+L+ A+ L      +N   D   + SIL+  AE  S+  G+++ S +  SG 
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNF--DLGAYCSILQLCAERKSIRDGRRVRSIIESSGV 181

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
           M +   G  L+ MY K G LK+    F ++ E  I  WN +IS  + +G+   ++  F+ 
Sbjct: 182 MIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQ 241

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M++ G +P+S +  S+L   +    +EEG Q  + +  K           S++       
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEGRQ-VHGLICKLGFNSYNTVVNSLISFYFVGR 300

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
               A+KL  ++  + D I W+S+I S  +   L+   +  +   KM           M 
Sbjct: 301 KVRCAQKLFDELT-DRDVISWNSMI-SGYVKNGLD--DRGIEIFIKMLVFGVDIDLATMV 356

Query: 588 NIYA--------VAGQWESVSQVKKAMRERGVR----KVTAYSWV-ELKSKVHVFTANDE 634
           N++         + G+      +K A  +R VR     +  YS   +L S + VF   DE
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416

Query: 635 ------LHPQTNEIRRKIEN----LMQEMKKEGYKPDT 662
                     T  +R  + +    L  EMK  G  PD 
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/813 (32%), Positives = 453/813 (55%), Gaps = 77/813 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N ++ N++++GY K G L+ A ELF  M  R   SW  L+ GY Q  Q+  + + F
Sbjct: 86  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M   G S P+  T A  +  C      +  +Q+ A + KF       +  +LVD + +
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205

Query: 121 IRCLDLARRVF-------------------------------KEMPQKDSVSFNALITGF 149
              +DLA R+F                                 MP++D VS+N +++  
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G   EA+ + V+MQ  G +    T+ ++L+A   L+ +  G+Q+HA V++     + 
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           +VA+AL++LY+K  C  EA+ +F  + + + V++ V+I+ +     + ES++LF +++  
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                QF  +TL+S   +++DL +GRQ+H+  + +  I  V V+NSL+ MYAKC   + A
Sbjct: 386 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI----------------- 372
           + IF  ++    V WT+MI+AY Q GN+ +A   F  M   N+                 
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 505

Query: 373 ---------------SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
                            D  T+ ++ +  A+L +  LG Q+    ++ G + +    +A+
Sbjct: 506 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 565

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY+K G + +A + F  +  ++IVSWNA+I+  +Q+G  +  ++ F+D+++ G +PD 
Sbjct: 566 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 625

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +S ++VLS CSH GL++EG  YF+ M + + + P  EH++ MVD+L R+G   EA+ L+ 
Sbjct: 626 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 685

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            MP +P   +W +++++C+IH N E A+ AA  +F+++   D+  Y+ M+ IYA AG+ +
Sbjct: 686 DMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS-PDSGSYMLMAKIYADAGKSD 744

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
             +Q++K MR++G++K   YSW+E+ +KVHVF A+D  HPQ   IR+K++ LM+++ + G
Sbjct: 745 DSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 804

Query: 658 Y-KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           Y + D++             S  +HSE+LA+AF L+  P   PI +MKNLR C DCH  I
Sbjct: 805 YVRTDST------------RSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVI 852

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KLIS +TGRE  +RD+ RFHHF  G CSC D+W
Sbjct: 853 KLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 278/610 (45%), Gaps = 87/610 (14%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF-KEM 134
           FA  L  C           +H  ++  G  S + + N+L+ +Y     L  ARR+   ++
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEM-------------------QHL------- 168
              + ++ N ++ G+AK G   +A++LF  M                   Q+L       
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 169 ------GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL---- 218
                    P+ FT A A+ +   L   +L  Q+ A V K +  ++  VA AL+D+    
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 219 ---------------------------YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                                      Y K   V  A +LF  MPE D VS+N+M++  +
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            + + +E+L +  ++Q          +++ L+  A    L+ G+Q+H Q I      +  
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VA++LV++YAK G F+EAK +F +L   + V WT +IS ++Q G   E++ LF +M    
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           ++ DQ   A+++        L LG+QLHS  ++SG +  V   ++L+ MYAK  +L+ A 
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ M E++IVSW ++I+A +Q G+     + F+ M     + + ++  ++L A    G
Sbjct: 447 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHG 502

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD-EAEKLMAQM---PFEPDEIM 547
             E+GL+ +  M  +  +RP    Y ++       GC D  A KL  Q+     +   I+
Sbjct: 503 AEEDGLRMYKVMLSEEYVRPDWVTYVTLF-----KGCADLGANKLGDQIIGRTVKVGLII 557

Query: 548 WSSVINSC-----RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            +SV N+      +  + LE     A ++F    ++D   + AM   Y+  G  +   ++
Sbjct: 558 DTSVANAVITMYSKCGRILE-----ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEI 612

Query: 603 KKAMRERGVR 612
              + +RG +
Sbjct: 613 FDDILKRGAK 622


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/711 (37%), Positives = 416/711 (58%), Gaps = 44/711 (6%)

Query: 78  TLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TL+   +   + ++  Q+HA  I+     + S  I+    +  Y  ++ L  A  +FK +
Sbjct: 10  TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLLFKTL 65

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
                +++ ++I  F  + L  +A+  FVEM+  G  P    F + L +   + D+  G 
Sbjct: 66  KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSK-------------------------------HD 223
            VH F+V+     +++  NAL+++Y+K                                 
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185

Query: 224 CVV-----EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
           C++       R++F  MP  D VSYN +I  YA +  Y+++L++ RE+  T      F  
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           S++L + +  +D+  G++IH   I     S+V + +SLVDMYAK  R E+++ +F+ L  
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              + W ++++ YVQ G   EAL LF +M  A +      F+S++ A A LA+L LGKQL
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H +V+R GF SN+F  SAL+DMY+K G++K A + F  M   + VSW A+I   A +G  
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              +  FE+M + G +P+ V+ ++VL+ACSH GL++E   YFNSMT+ Y L  + EHYA+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           + D+L R+G  +EA   +++M  EP   +WS++++SC +HKNLE A+K A+++F ++   
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS-E 544

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           +   YV M N+YA  G+W+ +++++  MR++G+RK  A SW+E+K+K H F + D  HP 
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
            ++I   ++ +M++M+KEGY  DTS  LHD DEE K E L  HSERLA+AF +INT  G+
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGT 664

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            I V KN+R CTDCH AIK ISKIT REI VRD+SRFHHF  G CSC D+W
Sbjct: 665 TIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 246/486 (50%), Gaps = 43/486 (8%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S +++IS Y     L  A  LF ++     ++W  +I  ++ ++ F +A   FV+MR  G
Sbjct: 41  SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI------ 121
              PD+  F ++L  C+          VH  I++ G +  L   N+L++ Y K+      
Sbjct: 101 RC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159

Query: 122 -------------------------RC-----LDLARRVFKEMPQKDSVSFNALITGFAK 151
                                     C     +D  RRVF+ MP+KD VS+N +I G+A+
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            G+ E+A+++  EM     KP  FT ++ L       D+  G+++H +V++     +V++
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            ++L+D+Y+K   + ++ ++F  +   DG+S+N ++  Y  N +Y E+L+LFR++   + 
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                 FS+++   A+   L +G+Q+H   +     S + +A++LVDMY+KCG  + A++
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           IF  ++ +  V WTA+I  +   G+  EA++LF EM R  +  +Q  F ++L A + +  
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459

Query: 392 LSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNA 447
           +       +S     G    +   +A+ D+  ++G L++A     +M   P  ++  W+ 
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV--WST 517

Query: 448 LISACA 453
           L+S+C+
Sbjct: 518 LLSSCS 523



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTFAT 78
            + + R +F  M  +  VS+  +I GY+Q   + +A ++  +M   G +D  PD  T ++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM---GTTDLKPDSFTLSS 247

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           +L   SE     +  ++H  +I+ G +S + I +SLVD Y K   ++ + RVF  +  +D
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            +S+N+L+ G+ + G   EA++LF +M     KP    F++ + A   LA + LG+Q+H 
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           +V++  F  N+F+A+AL+D+YSK   +  ARK+F  M  +D VS+  +I  +A +    E
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           ++ LF E++      +Q  F  +L+  ++  L  +     ++ T V     E++   ++ 
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
           D+  + G+ EEA    + +    T   W+ ++S+     NLE A
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELA 531



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + L+  Y K GN+  AR++F+ M     VSWT +I G++      EA  LF +M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE-------LIQVH------------ADI------ 99
              G  P+ V F  +L+ CS     +E       + +V+            AD+      
Sbjct: 437 RQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495

Query: 100 IKFGYNSILIIC--------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI---TG 148
           ++  YN I  +C        ++L+ S    + L+LA +V +++   DS +  A +     
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555

Query: 149 FAKEGLNEEAIKLFVEMQHLGFK 171
           +A  G  +E  KL + M+  G +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLR 578


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/813 (32%), Positives = 453/813 (55%), Gaps = 77/813 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N ++ N++++GY K G L+ A ELF  M  R   SW  L+ GY Q  Q+  + + F
Sbjct: 66  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M   G S P+  T A  +  C      +  +Q+ A + KF       +  +LVD + +
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185

Query: 121 IRCLDLARRVF-------------------------------KEMPQKDSVSFNALITGF 149
              +DLA R+F                                 MP++D VS+N +++  
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G   EA+ + V+MQ  G +    T+ ++L+A   L+ +  G+Q+HA V++     + 
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           +VA+AL++LY+K  C  EA+ +F  + + + V++ V+I+ +     + ES++LF +++  
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                QF  +TL+S   +++DL +GRQ+H+  + +  I  V V+NSL+ MYAKC   + A
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI----------------- 372
           + IF  ++    V WT+MI+AY Q GN+ +A   F  M   N+                 
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 485

Query: 373 ---------------SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
                            D  T+ ++ +  A+L +  LG Q+    ++ G + +    +A+
Sbjct: 486 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 545

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY+K G + +A + F  +  ++IVSWNA+I+  +Q+G  +  ++ F+D+++ G +PD 
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 605

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +S ++VLS CSH GL++EG  YF+ M + + + P  EH++ MVD+L R+G   EA+ L+ 
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 665

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            MP +P   +W +++++C+IH N E A+ AA  +F+++   D+  Y+ M+ IYA AG+ +
Sbjct: 666 DMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS-PDSGSYMLMAKIYADAGKSD 724

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
             +Q++K MR++G++K   YSW+E+ +KVHVF A+D  HPQ   IR+K++ LM+++ + G
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 784

Query: 658 Y-KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           Y + D++             S  +HSE+LA+AF L+  P   PI +MKNLR C DCH  I
Sbjct: 785 YVRTDST------------RSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVI 832

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KLIS +TGRE  +RD+ RFHHF  G CSC D+W
Sbjct: 833 KLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 278/610 (45%), Gaps = 87/610 (14%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF-KEM 134
           FA  L  C           +H  ++  G  S + + N+L+ +Y     L  ARR+   ++
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEM-------------------QHL------- 168
              + ++ N ++ G+AK G   +A++LF  M                   Q+L       
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 169 ------GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL---- 218
                    P+ FT A A+ +   L   +L  Q+ A V K +  ++  VA AL+D+    
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 219 ---------------------------YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                                      Y K   V  A +LF  MPE D VS+N+M++  +
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            + + +E+L +  ++Q          +++ L+  A    L+ G+Q+H Q I      +  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VA++LV++YAK G F+EAK +F +L   + V WT +IS ++Q G   E++ LF +M    
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           ++ DQ   A+++        L LG+QLHS  ++SG +  V   ++L+ MYAK  +L+ A 
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ M E++IVSW ++I+A +Q G+     + F+ M     + + ++  ++L A    G
Sbjct: 427 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHG 482

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD-EAEKLMAQM---PFEPDEIM 547
             E+GL+ +  M  +  +RP    Y ++       GC D  A KL  Q+     +   I+
Sbjct: 483 AEEDGLRMYKVMLSEEYVRPDWVTYVTLF-----KGCADLGANKLGDQIIGRTVKVGLII 537

Query: 548 WSSVINSC-----RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            +SV N+      +  + LE     A ++F    ++D   + AM   Y+  G  +   ++
Sbjct: 538 DTSVANAVITMYSKCGRILE-----ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEI 592

Query: 603 KKAMRERGVR 612
              + +RG +
Sbjct: 593 FDDILKRGAK 602


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/740 (35%), Positives = 430/740 (58%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K+ N+   R +F+ M +R  VSWT L+ GYS    +   ++LF  M+ +G   P
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG-VLP 192

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T +T+++           +QVHA ++K G+   + + NSL+  Y ++  L  AR VF
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +M  +D V++N++I G+ + G + E  ++F +MQ  G KP+  TFA+ + +   L ++A
Sbjct: 253 DKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELA 312

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
           L + +    +K+ F  +  V  AL+   SK   + +A  LF  M E   V S+  MI+  
Sbjct: 313 LVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N    +++ LF +++      + F +S +L+V           ++H + I T      
Sbjct: 373 LQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSS 428

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+D Y K G   +A ++F  +     + W+AM++ Y Q G  EEA  LF ++ + 
Sbjct: 429 SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE 488

Query: 371 NISADQATFASILRASAE-LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I  ++ TF+S++ A A   A+   GKQ H++ I+    + +   SAL+ MYAK G++  
Sbjct: 489 GIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDS 548

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + FK   ER++VSWN++IS  +Q+G A+  L+ F++M +     D+V+ + V++AC+H
Sbjct: 549 AHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTH 608

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+E+G +YFNSM   + + P  +HY+ M+D+  R+G  ++A  ++ +MPF P   +W 
Sbjct: 609 AGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWR 668

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ + R+H+N+E  + AA++L  ++   D+A YV +SN+YA AG W+  + V+K M +R
Sbjct: 669 TLLGAARVHRNVELGELAAEKLISLQP-EDSAAYVLLSNMYAAAGNWQERTNVRKLMDKR 727

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K   YSW+E+K+K + F A D  HP +N+I  K+  L   +K  GY+PDT    HD 
Sbjct: 728 KVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDI 787

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           ++E K   L +HSERLAIAF LI TP   PI ++KNLR C DCH   KL+S +  R I V
Sbjct: 788 EDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVV 847

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHFKDG CSC D+W
Sbjct: 848 RDSNRFHHFKDGLCSCGDYW 867



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 297/574 (51%), Gaps = 11/574 (1%)

Query: 25  ARELFNSMVDR--TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSG 82
           A  LF+ +  R  T      L+  YS+  Q +EA  LFV +       PD  T + + + 
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSL-LHSSLQPDESTLSCVFNI 102

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
           C+         QVH   +KFG    + +  SLVD Y K   ++  RRVF EM +++ VS+
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
            +L+ G++  GL     +LF +MQ+ G  P+ +T +  ++A V    + +G QVHA VVK
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
             F E + V N+L+ LYS+   + +AR +F +M   D V++N MI  Y  N Q  E  ++
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F ++Q      +   F++++   A+  +L + + +  + + +   ++  V  +L+   +K
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 323 CGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           C   ++A  +F+ +    + V WTAMIS  +Q G  ++A+NLF +M R  +  +  T+++
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           IL     +       ++H+ VI++ +  +   G+ALLD Y K G+  DA++ F+ +  ++
Sbjct: 403 ILTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYF 500
           +++W+A+++  AQ G+ +   K F  +++ G +P+  +  SV++AC S     E+G Q F
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQ-F 517

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
           ++   K +L       +++V +  + G  D A ++  +   E D + W+S+I+    H  
Sbjct: 518 HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQ 576

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + A +  D++ K     DA  ++ +      AG
Sbjct: 577 AKKALEVFDEMQKRNMDVDAVTFIGVITACTHAG 610



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 272/550 (49%), Gaps = 64/550 (11%)

Query: 126 LARRVFKEMPQKDSV--SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +A  +F ++P + +     N L+  ++++   +EA+ LFV + H   +P + T +   + 
Sbjct: 43  IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
             G  D  LGRQVH   VK   V++V V  +L+D+Y K + V + R++F EM E + VS+
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             ++  Y+WN  Y    +LF ++Q+     +++  ST+++ + N+  + IG Q+H   + 
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 + V NSL+ +Y++ G   +A+++F  +     V W +MI+ YV+ G   E   +
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F +M  A +     TFAS++++ A L  L+L K +    ++SGF ++    +AL+   +K
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSK 342

Query: 424 SGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
              + DA+  F  M E +N+VSW A+IS C QNG     +  F  M + G +P+  +  +
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 483 VL----------------------SACSHCGLIEEGLQYFNSM--TQKYKLRPKKE--HY 516
           +L                      S+     L++  ++  N++   + +++   K+   +
Sbjct: 403 ILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAW 462

Query: 517 ASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSC------------------ 555
           ++M+    ++G  +EA KL  Q+     +P+E  +SSVIN+C                  
Sbjct: 463 SAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAI 522

Query: 556 --RIHKNL--------EFAKK----AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             R++  L         +AK+    +A ++FK +K RD   + +M + Y+  GQ +   +
Sbjct: 523 KMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALE 582

Query: 602 VKKAMRERGV 611
           V   M++R +
Sbjct: 583 VFDEMQKRNM 592



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 248/480 (51%), Gaps = 11/480 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y + G L  AR++F+ M  R  V+W  +I GY +  Q  E F++F  M+   G 
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQL-AGV 291

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P ++TFA+++  C+       +  +    +K G+ +  I+  +L+ +  K + +D A  
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351

Query: 130 VFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F  M + K+ VS+ A+I+G  + G N++A+ LF +M+  G KP+ FT++A L+    + 
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV- 410

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                 ++HA V+KTN+  +  V  ALLD Y K    ++A K+F  +   D ++++ M+ 
Sbjct: 411 ---FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLA 467

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAI 307
            YA   + +E+ KLF +L       ++F FS++++  A+     + G+Q H   I     
Sbjct: 468 GYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLN 527

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           + + V+++LV MYAK G  + A E+F        V W +MIS Y Q G  ++AL +F EM
Sbjct: 528 NALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEM 587

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGS 426
            + N+  D  TF  ++ A      +  G++  + +I    ++      S ++D+Y+++G 
Sbjct: 588 QKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGM 647

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           L+ A+    EMP       W  L+ A   + + +    + E ++    QP+  +   +LS
Sbjct: 648 LEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLIS--LQPEDSAAYVLLS 705



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 215/472 (45%), Gaps = 30/472 (6%)

Query: 210 FVANALLDLYSKHDCVVE-ARKLFGEMPEVDGV--SYNVMITCYAWNEQYKESLKLFREL 266
           F++N +L       CV   A  LF ++P        +N ++  Y+ ++Q KE+L LF  L
Sbjct: 32  FISNTVL-------CVPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSL 84

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
             +     +   S + ++ A  LD ++GRQ+H Q +    +  V V  SLVDMY K    
Sbjct: 85  LHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENV 144

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
            + + +F  +   + V WT++++ Y   G       LF +M    +  ++ T ++++ A 
Sbjct: 145 NDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAAL 204

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
                + +G Q+H+ V++ GF   +   ++L+ +Y++ G L+DA   F +M  R+ V+WN
Sbjct: 205 VNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWN 264

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL-QYFNSMTQ 505
           ++I+   +NG      + F  M  +G +P  ++  SV+ +C+   L E  L +       
Sbjct: 265 SMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA--SLRELALVKLMQCKAL 322

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           K      +    +++  L +    D+A  L + M    + + W+++I+ C  +   + A 
Sbjct: 323 KSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAV 382

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY--SWVELK 623
               Q+ +     +   Y A+  ++      E  ++V K   ER     TA   ++V+L 
Sbjct: 383 NLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLG 442

Query: 624 SKV------HVFTANDEL--------HPQTNEIRRKIENLMQEMKKEGYKPD 661
           + +       +  A D +        + QT E     + L  ++ KEG KP+
Sbjct: 443 NTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAK-LFHQLIKEGIKPN 493


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/741 (37%), Positives = 440/741 (59%), Gaps = 4/741 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y + G L  AR++F+ M  R  VSW  LI GYS    + EA +++ +++ +   
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWI 203

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T +++L          +   +H   +K G NS++++ N LV  Y K R    ARR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EM  +DSVS+N +I G+ K  + EE++++F+E     FKP   T ++ L A   L D
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRD 322

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++L + ++ +++K  FV    V N L+D+Y+K   ++ AR +F  M   D VS+N +I+ 
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +    E++KLF+ +           +  L+SV     DL+ G+ +H+  I +    +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+N+L+DMYAKCG   ++ +IF+++    TV W  +ISA V+ G+    L +  +M +
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + +  D ATF   L   A LA+  LGK++H  ++R G+ S +  G+AL++MY+K G L++
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           + + F+ M  R++V+W  +I A    G+ +  L++F DM +SG  PDSV  ++++ ACSH
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSH 622

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL++EGL  F  M   YK+ P  EHYA +VD+L RS    +AE+ +  MP +PD  +W+
Sbjct: 623 SGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWA 682

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           SV+ +CR   ++E A++ + ++ ++    D    +  SN YA   +W+ VS ++K+++++
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT-SCALHD 668
            + K   YSW+E+   VHVF++ D+  PQ+  I + +E L   M KEGY PD    + + 
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNL 801

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           E+EE K   +  HSERLAIAF L+NT  G+P+ VMKNLR C DCH   KLISKI GREI 
Sbjct: 802 EEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREIL 861

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD++RFH FKDG CSC+D W
Sbjct: 862 VRDANRFHLFKDGTCSCKDRW 882



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 262/502 (52%), Gaps = 4/502 (0%)

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM-PQKDSVSF 142
           S     NEL ++HA +I  G +S       L+D Y   R    +  VF+ + P K+   +
Sbjct: 15  SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N++I  F+K GL  EA++ + +++     P  +TF + + A  GL D  +G  V+  ++ 
Sbjct: 75  NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
             F  ++FV NAL+D+YS+   +  AR++F EMP  D VS+N +I+ Y+ +  Y+E+L++
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           + EL+ +      F  S++L    N L ++ G+ +H   + +   S V V N LV MY K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
             R  +A+ +F  +    +V +  MI  Y++   +EE++ +F+E        D  T +S+
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSV 313

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           LRA   L  LSL K ++++++++GF+      + L+D+YAK G +  A   F  M  ++ 
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSWN++IS   Q+GD    +K F+ M+    Q D ++ L ++S  +    ++ G +  +S
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHS 432

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
              K  +        +++D+  + G   ++ K+ + M    D + W++VI++C    +  
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFA 491

Query: 563 FAKKAADQLFKMEKLRDAAPYV 584
              +   Q+ K E + D A ++
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFL 513



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 7/193 (3%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM-PER 440
           I RA +  ++L+  +++H+ VI  G  S+ F    L+D Y+       ++  F+ + P +
Sbjct: 10  ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           N+  WN++I A ++NG     L+ +  + +S   PD  +  SV+ AC+     E G   +
Sbjct: 70  NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129

Query: 501 NSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
               Q   +  + + +   ++VD+  R G    A ++  +MP   D + W+S+I+    H
Sbjct: 130 E---QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSH 185

Query: 559 KNLEFAKKAADQL 571
              E A +   +L
Sbjct: 186 GYYEEALEIYHEL 198


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 394/648 (60%), Gaps = 14/648 (2%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+++Y K   + +ARRVF E+PQ D VS+N LI  +A  G     ++LF E++ L   
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
              FT +  ++A     D+ L RQ+H FVV         V NA+L  YS+   + EAR++
Sbjct: 139 LDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196

Query: 232 FGEMPEVDG---VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           F EM E  G   VS+N MI     + +  E++ LFRE+         F  +++L+     
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAM 347
            DL  GRQ H   I +       V + L+D+Y+KC G   E +++F  ++    V W  M
Sbjct: 257 KDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTM 316

Query: 348 ISAYVQKGNL-EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           IS +    +L E+ L  F EM R     D  +F  +  A + L+S SLGKQ+H+  I+S 
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSD 376

Query: 407 FMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
              N  S  +AL+ MY+K G++ DA + F  MPE N VS N++I+  AQ+G    +L+ F
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF 436

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M++    P+S++ ++VLSAC H G +EEG +YFN M +++ + P+ EHY+ M+D+L R
Sbjct: 437 ELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGR 496

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EAE+++  MPF P  I W++++ +CR H N+E A KAA++  ++E   +AAPYV 
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPY-NAAPYVM 555

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+YA A +WE  + VK+ MRERGV+K    SW+E+  KVHVF A D  HP   EI   
Sbjct: 556 LSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVY 615

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVES----LKYHSERLAIAFALINTPEGSPIL 701
           +  ++++MK+ GY PD   AL  +DEE++ +     L YHSE+LA+AF LI+T EG PIL
Sbjct: 616 MGKMLKKMKQAGYVPDIRWAL-VKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPIL 674

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V+KNLR C DCH A+KLIS +TGREITVRD+ RFH FK+G CSCRD+W
Sbjct: 675 VVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 238/474 (50%), Gaps = 11/474 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N LI+ Y K   +  AR +F+ +     VS+  LI  Y+ + +     +LF ++R
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +     D  T + +++ C   D    + Q+H  ++  G++    + N+++  Y +   L
Sbjct: 134 -ELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190

Query: 125 DLARRVFKEMPQ---KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ARRVF+EM +   +D VS+NA+I    +     EA+ LF EM   G K   FT A+ L
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDG 240
           +A   + D+  GRQ H  ++K+ F  N  V + L+DLYSK    +VE RK+F E+   D 
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310

Query: 241 VSYNVMITCYAWNEQYKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           V +N MI+ ++  E   E  L  FRE+Q   F      F  + S  +N     +G+Q+H 
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370

Query: 300 QTIVT-TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             I +    + V V N+LV MY+KCG   +A+ +F  +   +TV   +MI+ Y Q G   
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGSAL 417
           E+L LF  M   +I+ +  TF ++L A      +  G++  + +  R          S +
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +D+  ++G LK+A +  + MP     + W  L+ AC ++G+ +  +K+  + ++
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLR 544



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 204/411 (49%), Gaps = 16/411 (3%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NVF  N L++ Y+KH  +  AR++F E+P+ D VSYN +I  YA   +   +L+LF E++
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
             R     F  S +++   +  D+ + RQ+H   +V        V N+++  Y++ G   
Sbjct: 134 ELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLS 191

Query: 328 EAKEIFANLSHIST---VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           EA+ +F  +        V W AMI A  Q     EA+ LF EM R  +  D  T AS+L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK-SGSLKDAIQTFKEMPERNIV 443
           A   +  L  G+Q H  +I+SGF  N   GS L+D+Y+K +GS+ +  + F+E+   ++V
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLV 311

Query: 444 SWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
            WN +IS  +   D ++  L  F +M ++G++PD  S + V SACS+      G Q    
Sbjct: 312 LWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHAL 371

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
             +      +     ++V +  + G   +A ++   MP E + +  +S+I     H    
Sbjct: 372 AIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNTVSLNSMIAGYAQHG--- 427

Query: 563 FAKKAADQLFKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAMRER 609
             +  + +LF++   +D AP    ++A+ +     G+ E   +    M+ER
Sbjct: 428 -VEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKER 477



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P       N L++ Y K GN+  AR +F++M +   VS   +I GY+Q     E+ +LF
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF 436

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
            ++  +    P+ +TF  +LS C       E  Q + +++K  F         + ++D  
Sbjct: 437 -ELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAEHYSCMIDLL 494

Query: 119 CKIRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIK 160
            +   L  A R+ + MP    S+ +  L+    K G  E A+K
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVK 537



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 54/224 (24%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TF ++L+A      L  GK LH+   +S    + +  +    +Y+K GSL +A  +F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 438 PERNIVSWNALISACAQN-------------------------------GDAQATLKSFE 466
              N+ S+N LI+A A++                               G+   TL+ FE
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 467 DMVQSGYQPDSVSLLSVLSACS---------HCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           ++ +     D  +L  V++AC          HC ++  G   + S+              
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNN------------ 178

Query: 518 SMVDILCRSGCFDEAEKLMAQM--PFEPDEIMWSSVINSCRIHK 559
           +++    R G   EA ++  +M      DE+ W+++I +C  H+
Sbjct: 179 AVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/746 (34%), Positives = 424/746 (56%), Gaps = 10/746 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K G +  A ++F  M +R  VSW  +I G+S+    +E+F  F +M     S
Sbjct: 140 NALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEES 199

Query: 70  -DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T  T+L  C+  +   + + VH   +K G N  L++ NSL+D Y K R L  A+
Sbjct: 200 FVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQ 259

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----GFKPSDFTFAAALSA 183
            +F +  +K+ VS+N++I G+A+E   E+  + F  +Q +       K  +FT    L  
Sbjct: 260 LLFDKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPV 316

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            +  +++   +++H +  +     N  VANA +  Y++   +  + ++F  M      S+
Sbjct: 317 CLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSW 376

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++  YA N   +++L L+ ++  +  D   F   +LL   +    L  G +IH   + 
Sbjct: 377 NALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR 436

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  +  SL+ +Y  CG+   A+ +F  + H S V W  MI+ Y Q G  +EA+NL
Sbjct: 437 NGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINL 496

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F +M    I   +     +  A ++L++L LGK+LH F +++    ++F  S+++DMYAK
Sbjct: 497 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 556

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G +  + + F  + E+++ SWN +I+    +G  +  L+ FE M++ G +PD  +   +
Sbjct: 557 GGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 616

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L ACSH GL+E+GL+YFN M   + + PK EHY  +VD+L R+G  D+A +L+ +MP +P
Sbjct: 617 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP 676

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +WSS+++SCRIH NL   +K A++L ++E       YV +SN++A +G+W+ V +V+
Sbjct: 677 DSRIWSSLLSSCRIHGNLGLGEKVANKLLELEP-EKPENYVLISNLFAGSGKWDDVRRVR 735

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             M++ G++K    SW+E+  KVH F   DE+ P+  E+R     L  ++   GY PDT 
Sbjct: 736 GRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTG 795

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD +EE K+  L+ HSE+LAI+F L+NT +G P+ V KNLR C DCH A K ISK+ 
Sbjct: 796 SVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVV 855

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            R+I VRD+ RFHHF+DG CSC D+W
Sbjct: 856 NRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 273/575 (47%), Gaps = 9/575 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V    +I+ Y   G+ + +R +F+ +  +    W  ++  Y++   F +A  +F ++ + 
Sbjct: 35  VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 94

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
               PD  T   ++  C+          +H    K    S + + N+L+  Y K   ++ 
Sbjct: 95  TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 154

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAG 184
           A +VF+ MP+++ VS+N++I GF++ G  +E+   F EM      F P   T    L   
Sbjct: 155 AVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVC 214

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G  DI  G  VH   VK    E + V N+L+D+YSK   + EA+ LF +  + + VS+N
Sbjct: 215 AGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWN 274

Query: 245 VMITCYAWNEQYKESLKLFRELQF--TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            MI  YA  E    +  L +++Q    +    +F    +L V   + +LQ  +++H  + 
Sbjct: 275 SMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S   VAN+ +  Y +CG    ++ +F  +   +   W A++  Y Q  +  +AL+
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L+++M  + +  D  T  S+L A + + SL  G+++H F +R+G   + F G +LL +Y 
Sbjct: 395 LYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI 454

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
             G    A   F  M  R++VSWN +I+  +QNG     +  F  M+  G QP  ++++ 
Sbjct: 455 CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 514

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           V  ACS    +  G +  +    K  L       +S++D+  + GC   ++++  ++  E
Sbjct: 515 VCGACSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-E 572

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            D   W+ +I    IH      K+A +   KM +L
Sbjct: 573 KDVASWNVIIAGYGIHGR---GKEALELFEKMLRL 604



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 231/490 (47%), Gaps = 4/490 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N+  +  N LI  Y K   L+ A+ LF+    +  VSW  +IGGY+++      F L   
Sbjct: 236 NEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQK 295

Query: 63  MRT-DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M+T D     D  T   +L  C E      L ++H    + G  S  ++ N+ + +Y + 
Sbjct: 296 MQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRC 355

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  + RVF  M  K   S+NAL+ G+A+     +A+ L+++M   G  P  FT  + L
Sbjct: 356 GALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLL 415

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +  +  G ++H F ++     + F+  +LL LY        A+ LF  M     V
Sbjct: 416 LACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLV 475

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+NVMI  Y+ N    E++ LFR++        +     +    +    L++G+++H   
Sbjct: 476 SWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFA 535

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +      ++ V++S++DMYAK G    ++ IF  L       W  +I+ Y   G  +EAL
Sbjct: 536 LKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEAL 595

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDM 420
            LF +M R  +  D  TF  IL A +    +  G +  + ++        +   + ++DM
Sbjct: 596 ELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDM 655

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSV 478
             ++G + DA++  +EMP + +   W++L+S+C  +G+     K    +++    +P++ 
Sbjct: 656 LGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENY 715

Query: 479 SLLSVLSACS 488
            L+S L A S
Sbjct: 716 VLISNLFAGS 725



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 210/424 (49%), Gaps = 26/424 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N  I+ Y + G L ++  +F+ M  +T  SW  L+ GY+Q +  R+A  L++ M 
Sbjct: 341 NELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM- 399

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           TD G DPD+ T  +LL  CS   + +   ++H   ++ G      I  SL+  Y      
Sbjct: 400 TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKP 459

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F  M  +  VS+N +I G+++ GL +EAI LF +M   G +P +        A 
Sbjct: 460 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGAC 519

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L+ + LG+++H F +K +  E++FV+++++D+Y+K  C+  ++++F  + E D  S+N
Sbjct: 520 SQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWN 579

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           V+I  Y  + + KE+L+LF ++         F F+ +L   ++   ++ G +   Q +  
Sbjct: 580 VIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNL 639

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNL---EE 359
             I  +++    +VDM  + GR ++A  +   +     +  W++++S+    GNL   E+
Sbjct: 640 HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEK 699

Query: 360 ALNLFIEM---------CRANISADQATFASILRASAELASLSL-----------GKQLH 399
             N  +E+           +N+ A    +  + R    +  + L           G ++H
Sbjct: 700 VANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVH 759

Query: 400 SFVI 403
           +F+I
Sbjct: 760 NFLI 763



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 153/305 (50%), Gaps = 6/305 (1%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           DI +GR++H  V  +    N FV N  ++ +YS      ++R +F ++   +   +N ++
Sbjct: 13  DIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIV 72

Query: 248 TCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y  NE +++++ +F EL   T      F    ++   A  LDL +G+ IH        
Sbjct: 73  SAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDL 132

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +S+V V N+L+ MY KCG  EEA ++F ++   + V W ++I  + + G L+E+ N F E
Sbjct: 133 VSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFRE 192

Query: 367 MCRANIS--ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           M     S   D AT  ++L   A    +  G  +H   ++ G    +   ++L+DMY+K 
Sbjct: 193 MLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKC 252

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLS 482
             L +A   F +  ++NIVSWN++I   A+  D   T    + M    +  + D  ++L+
Sbjct: 253 RFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILN 312

Query: 483 VLSAC 487
           VL  C
Sbjct: 313 VLPVC 317



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 150/281 (53%), Gaps = 6/281 (2%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANL 336
              LL     + D+++GR++H     +T      V N+ ++ MY+ CG   +++ +F  L
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLG 395
              +   W A++SAY +    E+A+++F E+        D  T   +++A A L  L LG
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           + +H    +   +S+VF G+AL+ MY K G +++A++ F+ MPERN+VSWN++I   ++N
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180

Query: 456 GDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           G  Q +  +F +M+  +  + PD  +L++VL  C+    IE+G+   + +  K  L  + 
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEEL 239

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               S++D+  +     EA+ L  +   + + + W+S+I  
Sbjct: 240 MVNNSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGG 279


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/739 (35%), Positives = 416/739 (56%), Gaps = 4/739 (0%)

Query: 12   LISGYVKSGNLATARELFNSMV-DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
            L+  YV  G L   R +F+ ++ D     W +++  Y++   +RE+  LF  M+  G + 
Sbjct: 492  LVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITG 551

Query: 71   PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
              Y TF+ +L   +      E  ++H  + K G+ S   + NSL+ +Y K   +D A ++
Sbjct: 552  NSY-TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKL 610

Query: 131  FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
            F E+  +D VS+N++I+G    G +  A++ FV+M  L       T   +++A   +  +
Sbjct: 611  FDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSL 670

Query: 191  ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            +LGR +H   VK  F   V   N LLD+YSK   + +A + F +M +   VS+  +I  Y
Sbjct: 671  SLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAY 730

Query: 251  AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                 Y ++++LF E++        +  +++L   A    L  GR +H           +
Sbjct: 731  VREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCL 790

Query: 311  KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             V+N+L+DMYAKCG  EEA  +F+ +     V W  MI  Y +     EAL LF EM + 
Sbjct: 791  PVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE 850

Query: 371  NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +   D  T A +L A   LA+L +G+ +H  ++R+G+ S +   +AL+DMY K GSL  A
Sbjct: 851  S-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHA 909

Query: 431  IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
               F  +PE+++++W  +IS C  +G     + +F+ M  +G +PD ++  S+L ACSH 
Sbjct: 910  RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHS 969

Query: 491  GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            GL+ EG  +FNSM  +  + PK EHYA MVD+L R+G   +A  L+  MP +PD  +W +
Sbjct: 970  GLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGA 1029

Query: 551  VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
            ++  CRIH ++E A+K A+ +F++E   +A  YV ++NIYA A +WE V ++++ + +RG
Sbjct: 1030 LLCGCRIHHDVELAEKVAEHVFELEP-DNAGYYVLLANIYAEAEKWEEVKKLRERIGKRG 1088

Query: 611  VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            ++K    SW+E++ K   F + D  HPQ   I   + NL  +MK EG+ P    AL +  
Sbjct: 1089 LKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAG 1148

Query: 671  EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            +  K  +L  HSE+LA+AF ++N P G  I V KNLR C DCH   K +SK T REI +R
Sbjct: 1149 DMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILR 1208

Query: 731  DSSRFHHFKDGFCSCRDFW 749
            DS+RFHHFKDGFCSCRDFW
Sbjct: 1209 DSNRFHHFKDGFCSCRDFW 1227



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 253/514 (49%), Gaps = 9/514 (1%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           + +    R A +L   +R    S+ D   ++++L  C+E     E   VH+ I   G   
Sbjct: 428 FCEVGDLRNAVEL---LRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPI 484

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEM 165
             ++   LV  Y     L   RR+F  +   + V  +N +++ +AK G   E+I LF +M
Sbjct: 485 EGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKM 544

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           Q LG   + +TF+  L     L  +   +++H  V K  F     V N+L+  Y K   V
Sbjct: 545 QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEV 604

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
             A KLF E+ + D VS+N MI+    N     +L+ F ++   R           ++  
Sbjct: 605 DSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAAC 664

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           AN   L +GR +H Q +      EV   N+L+DMY+KCG   +A + F  +   + V WT
Sbjct: 665 ANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWT 724

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           ++I+AYV++G  ++A+ LF EM    +S D  +  S+L A A   SL  G+ +H+++ ++
Sbjct: 725 SLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKN 784

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
                +   +AL+DMYAK GS+++A   F ++P ++IVSWN +I   ++N      LK F
Sbjct: 785 NMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLF 844

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA-SMVDILC 524
            +M Q   +PD +++  +L AC     +E G      + +       + H A +++D+  
Sbjct: 845 AEM-QKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNG--YSSELHVANALIDMYV 901

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           + G    A  L   +P E D I W+ +I+ C +H
Sbjct: 902 KCGSLVHARLLFDMIP-EKDLITWTVMISGCGMH 934



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 244/487 (50%), Gaps = 15/487 (3%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM- 63
            NTV  N LI+ Y KSG + +A +LF+ + DR  VSW  +I G         A + FV M 
Sbjct: 588  NTV-VNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML 646

Query: 64   --RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              R       D  T    ++ C+   + +    +H   +K  ++  ++  N+L+D Y K 
Sbjct: 647  ILRV----GVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKC 702

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
              L+ A + F++M QK  VS+ +LI  + +EGL ++AI+LF EM+  G  P  ++  + L
Sbjct: 703  GNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVL 762

Query: 182  SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             A      +  GR VH ++ K N    + V+NAL+D+Y+K   + EA  +F ++P  D V
Sbjct: 763  HACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIV 822

Query: 242  SYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+N MI  Y+ N    E+LKLF E+Q  +R D      + LL    +   L+IGR IH  
Sbjct: 823  SWNTMIGGYSKNSLPNEALKLFAEMQKESRPD--GITMACLLPACGSLAALEIGRGIHGC 880

Query: 301  TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             +     SE+ VAN+L+DMY KCG    A+ +F  +     + WT MIS     G   EA
Sbjct: 881  ILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEA 940

Query: 361  LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLD 419
            +  F +M  A I  D+ TF SIL A +    L+ G    + +I    M       A ++D
Sbjct: 941  IATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVD 1000

Query: 420  MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            + A++G+L  A    + MP + +   W AL+  C  + D +   K  E + +   +PD+ 
Sbjct: 1001 LLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE--LEPDNA 1058

Query: 479  SLLSVLS 485
                +L+
Sbjct: 1059 GYYVLLA 1065


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 410/704 (58%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N ++  Y K   L+ A RVF+EMP+ DSVS+ A+I G+ + G  E AI +F EM      
Sbjct: 83  NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ FT    L++   +  + +GR+VH+FVVK      + VAN+LL++Y+K    V A+ +
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202

Query: 232 FG-------------------------------EMPEVDGVSYNVMITCYAWNEQYKESL 260
           F                                +M E D VS+N MI+ Y  +   +E+L
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREAL 262

Query: 261 KLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +F ++      +  +F  ++ LS  AN  +L++G+QIH   I T   +   V N+L+ M
Sbjct: 263 DIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISM 322

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           Y+K G  E                                  A+ IF +L     V WTA
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTA 382

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  YVQ G  ++A+ LF  M +     +  T A++L  S+ LASL  G+Q+H+   RSG
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG 442

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSF 465
             S+V   +AL+ MYAKSGS+ DA   F  +  +R+ ++W ++I A AQ+G  +  L  F
Sbjct: 443 NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLF 502

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M+++G +PD ++ + VLSAC+H GL+E+G  Y+N M   +K+ P   HYA M+D+  R
Sbjct: 503 ERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGR 562

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA   +  MP EPD I W S++ SC++HKN+E A+ AA++L  +E   ++  Y A
Sbjct: 563 AGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEP-ENSGAYSA 621

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  GQWE+ + ++K+M+++GV+K   +SWV++K+KVH+F  +D LHPQ + I   
Sbjct: 622 LANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEM 681

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +  + +E+KK G+ PDT   LHD +EE+K + L +HSE+LAIAF LI TPE + + +MKN
Sbjct: 682 MAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKN 741

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH+AIK ISK+ GREI VRD++RFHHFK+G CSCRD+W
Sbjct: 742 LRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/608 (28%), Positives = 291/608 (47%), Gaps = 77/608 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N+++SGY K G L  A  +F  M +  +VSWT +I GY+Q  QF  A  +F
Sbjct: 74  MPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMF 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M +D    P   T   +L+ C+  +      +VH+ ++K G +S + + NSL++ Y K
Sbjct: 134 REMVSD-DVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAK 192

Query: 121 -------------------------------IRCLDLARRVFKEMPQKDSVSFNALITGF 149
                                             +DLA+  F++M ++D VS+NA+I+G+
Sbjct: 193 SGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGY 252

Query: 150 AKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + G + EA+ +F +M      KP  FT A+ALSA   L ++ LG+Q+HA +++T F   
Sbjct: 253 NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTF 312

Query: 209 VFVANALLDLYSKHDCV------VE---------------------------ARKLFGEM 235
             V NAL+ +YSK   V      +E                           AR++F  +
Sbjct: 313 GAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL 372

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D V++  MI  Y  N   +++++LFR +       + +  +T+LSV ++   L  GR
Sbjct: 373 RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGR 432

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQ 353
           QIH     +   S V V+N+L+ MYAK G   +A+ +F NL H    T+ WT+MI A  Q
Sbjct: 433 QIHASATRSGNASSVSVSNALITMYAKSGSINDARWVF-NLIHWKRDTITWTSMIIALAQ 491

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            G  EEAL LF  M    I  D  T+  +L A   +  +  G+  ++ +  +  +    S
Sbjct: 492 HGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPS 551

Query: 414 GSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             A ++D++ ++G L++A    + MP E ++++W +L+++C  + + +    + E ++  
Sbjct: 552 HYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLL- 610

Query: 472 GYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
             +P++    S L+   S CG  E       SM  K     KK+   S V I  +   F 
Sbjct: 611 -IEPENSGAYSALANVYSACGQWENAANIRKSMKDK---GVKKDQGFSWVQIKNKVHIFG 666

Query: 531 EAEKLMAQ 538
             + L  Q
Sbjct: 667 VDDGLHPQ 674



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 4/126 (3%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           + S L+ S +      GK +H+ +I++G    VF  + L++ YAK+G + DA + F EMP
Sbjct: 16  YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            +++ SWN ++S  A+ G  +   + FE+M     +PDSVS  +++   +  G  E  + 
Sbjct: 76  VKSVFSWNIILSGYAKGGRLEEAHRVFEEMP----EPDSVSWTAMIVGYNQMGQFENAIG 131

Query: 499 YFNSMT 504
            F  M 
Sbjct: 132 MFREMV 137


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/671 (38%), Positives = 401/671 (59%), Gaps = 34/671 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLG 169
           N+++ +Y K+  +     +F  MP++D VS+N+LI+G+A  GL  +++K +  M      
Sbjct: 79  NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
           F  +  TF+  L        + LGRQ+H  VVK  F+  VFV + L+D+YSK   +  AR
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198

Query: 230 KLFGEMPEVDGVSYNV-------------------------------MITCYAWNEQYKE 258
           K+F E+PE + V YN                                MIT +  N   ++
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           ++ +FRE++       Q+ F ++L+     + LQ G+Q+H   I T     + VA++LVD
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY KC   + A+ +F  ++  + V WTAM+  Y Q G  EEA+  F +M +  I  D  T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             S++ + A LASL  G Q H+  + SG +S +   +AL+ +Y K GS++D+ + F E+ 
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            ++ V+W AL+S  AQ G A  T+  FE M+  G +PD V+ + VLSACS  GL+E+G Q
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQ 498

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            F SM  ++ + P ++HY  M+D+  R+G  +EA   + +MPF PD I W+++++SCR +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            N++  K AA+ L +++   + A YV +S++YA  G+WE V++++K MR++G+RK    S
Sbjct: 559 GNMDIGKWAAEFLMELDP-HNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCS 617

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
           W++ K++VHVF+A+D+ +P +++I  ++E L  +M KEGY PD +  LHD  +  K++ L
Sbjct: 618 WIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKML 677

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
            +HSE+LAIAF L+  P G PI V+KNLR C+DCH A K ISKIT REI VRD++RFH F
Sbjct: 678 NHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLF 737

Query: 739 KDGFCSCRDFW 749
           KDG CSC DFW
Sbjct: 738 KDGTCSCGDFW 748



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 259/491 (52%), Gaps = 34/491 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+ N  S N ++S Y K G ++    LF++M  R  VSW  LI GY+      ++ K +
Sbjct: 70  MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 61  -VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
            + ++ DG  + + +TF+TLL   S+        Q+H  ++KFG+ S + + + LVD Y 
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189

Query: 120 KIRCLDLARRVFKEMPQK-------------------------------DSVSFNALITG 148
           K+  +  AR+VF E+P+K                               DS+S+ ++ITG
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           F + GL+ +AI +F EM+    +   +TF + L+A  G+  +  G+QVHA++++T++ +N
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +FVA+AL+D+Y K   +  A  +F +M   + VS+  M+  Y  N   +E++K F ++Q 
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
              +   F   +++S  AN   L+ G Q H + + +  IS + V+N+LV +Y KCG  E+
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           +  +F  +S    V WTA++S Y Q G   E + LF  M    +  D+ TF  +L A + 
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489

Query: 389 LASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWN 446
              +  G Q+  S +   G +      + ++D+++++G +++A     +MP   + +SW 
Sbjct: 490 AGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549

Query: 447 ALISACAQNGD 457
            L+S+C   G+
Sbjct: 550 TLLSSCRFYGN 560



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 193/361 (53%), Gaps = 5/361 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +N V  N LI G ++ G +  ++ LF  M +R ++SWT +I G++Q    R+A  +F
Sbjct: 204 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+ +     D  TF ++L+ C       E  QVHA II+  Y   + + ++LVD YCK
Sbjct: 264 REMKLE-NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCK 322

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +  A  VFK+M  K+ VS+ A++ G+ + G +EEA+K F +MQ  G +P DFT  + 
Sbjct: 323 CKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSV 382

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G Q HA  + +  +  + V+NAL+ LY K   + ++ +LF E+   D 
Sbjct: 383 ISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDE 442

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V++  +++ YA   +  E++ LF  +        +  F  +LS  +    ++ G QI   
Sbjct: 443 VTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFES 502

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHIS--TVPWTAMISAYVQKGNL 357
            I    I  ++   + ++D++++ GR EEA+  F N    S   + W  ++S+    GN+
Sbjct: 503 MINEHGIVPIQDHYTCMIDLFSRAGRIEEARN-FINKMPFSPDAISWATLLSSCRFYGNM 561

Query: 358 E 358
           +
Sbjct: 562 D 562



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 168/370 (45%), Gaps = 45/370 (12%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           +  LL +     +    + +H+  I T    E  + N+L+  YAK G    A ++F  + 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCR---------------------------- 369
           H +   W  ++SAY + G + E   LF  M R                            
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 370 -----ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
                 + + ++ TF+++L  +++   + LG+Q+H  V++ GFMS VF GS L+DMY+K 
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  A + F E+PE+N+V +N LI    + G  + + + F +M +     DS+S  S++
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER----DSISWTSMI 247

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA---QMPF 541
           +  +  GL  + +  F  M  +  L+  +  + S++          E +++ A   +  +
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLE-NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           + +  + S++++     KN+    K+A+ +FK    ++   + AM   Y   G  E   +
Sbjct: 307 KDNIFVASALVDMYCKCKNI----KSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVK 362

Query: 602 VKKAMRERGV 611
               M++ G+
Sbjct: 363 TFSDMQKYGI 372


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/738 (36%), Positives = 425/738 (57%), Gaps = 3/738 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + + G++  A  +F  +  +  V +  ++ G+++ +   +A + FV MR D   +P
Sbjct: 75  LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEP 133

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F  LL  C +        ++H  ++K G++  L     L + Y K R ++ AR+VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP++D VS+N ++ G+++ G+   A+++   M     KPS  T  + L A   L  I+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G+++H + +++ F   V ++ AL+D+Y+K   +  AR+LF  M E + VS+N MI  Y 
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            NE  KE++ +F+++       +       L   A+  DL+ GR IH  ++       V 
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY KC   + A  +F  L   + V W AMI  + Q G   +ALN F +M    
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T+ S++ A AEL+     K +H  V+RS    NVF  +AL+DMYAK G++  A 
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M ER++ +WNA+I     +G  +A L+ FE+M +   +P+ V+ LSV+SACSH G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+E GL+ F  M + Y +    +HY +MVD+L R+G  +EA   + QMP +P   ++ ++
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C+IHKN+ FA+KAA++LF++    D   +V ++NIY  A  WE V QV+ +M  +G+
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNP-DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    S VE+K++VH F +    HP + +I   +E L+  +K+ GY PDT+  L  E+ 
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVEN- 731

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           ++K + L  HSE+LAI+F L+NT  G+ I V KNLR C DCH A K IS +TGREI VRD
Sbjct: 732 DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRD 791

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHFK+G CSC D+W
Sbjct: 792 MQRFHHFKNGACSCGDYW 809



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 248/500 (49%), Gaps = 8/500 (1%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           A LL  CS   +  EL Q+   + K G          LV  +C+   +D A RVF+ +  
Sbjct: 41  ALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K +V ++ ++ GFAK    ++A++ FV M++   +P  + F   L      A++ +G+++
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  +VK+ F  ++F    L ++Y+K   V EARK+F  MPE D VS+N ++  Y+ N   
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           + +L++ + +       S     ++L  V+    + +G++IH   + +   S V ++ +L
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VDMYAKCG  E A+++F  +   + V W +MI AYVQ  N +EA+ +F +M    +    
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            +    L A A+L  L  G+ +H   +  G   NV   ++L+ MY K   +  A   F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  R +VSWNA+I   AQNG     L  F  M     +PD+ + +SV++A +   +    
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            ++ + +  +  L        ++VD+  + G    A +L+  M  E     W+++I+   
Sbjct: 458 -KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYG 515

Query: 557 IHKNLEFAKKAADQLFKMEK 576
            H    F K A +   +M+K
Sbjct: 516 THG---FGKAALELFEEMQK 532



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 223/480 (46%), Gaps = 40/480 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +++GY ++G    A E+  SM +                    E  K  
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE--------------------ENLK-- 233

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     P ++T  ++L   S     +   ++H   ++ G++S++ I  +LVD Y K
Sbjct: 234 ----------PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ AR++F  M +++ VS+N++I  + +    +EA+ +F +M   G KP+D +   A
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   L D+  GR +H   V+     NV V N+L+ +Y K   V  A  +FG++     
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N MI  +A N +  ++L  F +++        F + ++++ +A        + IH  
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            + +     V V  +LVDMYAKCG    A+ IF  +S      W AMI  Y   G  + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG---SAL 417
           L LF EM +  I  +  TF S++ A +    +  G  L  F +     S   S     A+
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMDHYGAM 581

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +D+  ++G L +A     +MP +  V+ + A++ AC  + +     K+ E + +    PD
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE--LNPD 639


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/703 (37%), Positives = 403/703 (57%), Gaps = 3/703 (0%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           + ++  R A   F  M    GS P   TF +LL  C+          VHA +   G +  
Sbjct: 200 ASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPE 259

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
            +   +L + Y K R    ARRVF  MP +D V++NAL+ G+A+ GL E A+ + V MQ 
Sbjct: 260 ALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQE 319

Query: 168 L-GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G +P   T  + L A      +   R+VHAF V+  F E V V+ A+LD+Y K   V 
Sbjct: 320 EDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVD 379

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            ARK+F  M + + VS+N MI  YA N    E+L LF+ +     D +       L    
Sbjct: 380 SARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACG 439

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               L  GR++H   +     S V V N+L+ MY KC R + A ++F  L + + V W A
Sbjct: 440 ELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNA 499

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI    Q G+ E+A+ LF  M   N+  D  T  SI+ A A+++     + +H + IR  
Sbjct: 500 MILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLH 559

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              +V+  +AL+DMYAK G +  A   F    +R++++WNA+I     +G  +  ++ FE
Sbjct: 560 LDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFE 619

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           +M  SG  P+  + LSVLSACSH GL++EG +YF+SM + Y L P  EHY +MVD+L R+
Sbjct: 620 EMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRA 679

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G   EA   + +MP EP   ++ +++ +C++HKN+E A+++A ++F++E   +   +V +
Sbjct: 680 GKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEP-EEGVYHVLL 738

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           +NIYA A  W+ V++V+ AM ++G++K   +S V+LK+++H F +    H Q  +I  ++
Sbjct: 739 ANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARL 798

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             L++E+K  GY PDT  ++HD ++++K + L  HSE+LAIA+ LI T  G+ I + KNL
Sbjct: 799 AKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNL 857

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH A KLIS +TGREI +RD  RFHHFKDG CSC D+W
Sbjct: 858 RVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 223/448 (49%), Gaps = 2/448 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           ++   L + Y K      AR +F+ M  R  V+W  L+ GY++      A  + V M+ +
Sbjct: 261 LAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEE 320

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G  PD VT  ++L  C++        +VHA  ++ G++  + +  +++D YCK   +D 
Sbjct: 321 DGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDS 380

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR+VF  M  ++SVS+NA+I G+A+ G   EA+ LF  M   G   +D +  AAL A   
Sbjct: 381 ARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGE 440

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L  +  GR+VH  +V+     NV V NAL+ +Y K      A ++F E+     VS+N M
Sbjct: 441 LGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAM 500

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I     N   +++++LF  +Q        F   +++  +A+  D    R IH  +I    
Sbjct: 501 ILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHL 560

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +V V  +L+DMYAKCGR   A+ +F +      + W AMI  Y   G+ + A+ LF E
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSG 425
           M  +    ++ TF S+L A +    +  G++  S +    G    +     ++D+  ++G
Sbjct: 621 MKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAG 680

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L +A    ++MP E  I  + A++ AC
Sbjct: 681 KLHEAWSFIQKMPMEPGISVYGAMLGAC 708



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI  Y K G ++ AR LFNS  DR  ++W  +I GY      + A +LF +
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M++  G  P+  TF ++LS CS     +E  +  + + + +G    +    ++VD   + 
Sbjct: 621 MKSS-GKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRA 679

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
             L  A    ++MP +  +S    + G  K   N E
Sbjct: 680 GKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVE 715


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 251/707 (35%), Positives = 418/707 (59%), Gaps = 2/707 (0%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           ++GG+++   +   F  F ++    G+ PD  T   ++  C +         +H  + KF
Sbjct: 1   MVGGFAKVGDYINCFGTFREL-IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G +    +C +LVD Y K R ++ AR +F +M ++D V++  +I G+A+ G   E++ LF
Sbjct: 60  GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            +M+  G  P        + A   L  +   R +  ++ +  F  +V +  A++D+Y+K 
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
            CV  AR++F  M E + +S++ MI  Y ++ Q +++L LFR +  +     +   ++LL
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              ++  +LQ+GR IH          +  V  +LVDMY KC   E+A+ +F  +     V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT MI  Y + GN  E+L LF +M    +  D+    +++ A A+L ++   + +  ++
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            R  F  +V  G+A++DM+AK G ++ A + F  M E+N++SW+A+I+A   +G  +  L
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 419

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++SG  P+ ++L+S+L ACSH GL+EEGL++F+ M + Y +R   +HY  +VD+
Sbjct: 420 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDL 479

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R+G  DEA KL+  M  E DE +W + + +CR HK++  A+KAA  L +++  ++   
Sbjct: 480 LGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQP-QNPGH 538

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           Y+ +SNIYA AG+WE V++ +  M +R ++K+  ++W+E+ +K H F+  D  HP++ EI
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
              +++L  +++  GY PDT+  LHD DEE+K+  L  HSE+LAIAF LI TPE +PI +
Sbjct: 599 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 658

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C DCH   KL+S ITGR I VRD++RFHHFK+G CSC D+W
Sbjct: 659 IKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 241/478 (50%), Gaps = 4/478 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YVK   +  AR LF+ M +R  V+WT++IGGY++  +  E+  LF  MR + G  P
Sbjct: 71  LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE-GVVP 129

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V   T++  C++    ++   +   I +  +   +I+  +++D Y K  C++ AR +F
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M +K+ +S++A+I  +   G   +A+ LF  M   G  P   T A+ L A   L ++ 
Sbjct: 190 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +GR +H  V K     + FV  AL+D+Y K   + +AR LF +MPE D V++ VMI  YA
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYA 309

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                 ESL LF +++       +    T++   A    +   R I           +V 
Sbjct: 310 ECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 369

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +  +++DM+AKCG  E A+EIF  +   + + W+AMI+AY   G   +AL+LF  M R+ 
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 429

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDA 430
           I  ++ T  S+L A +    +  G +  S +       ++V   + ++D+  ++G L +A
Sbjct: 430 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEA 489

Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           ++  + M  E++   W A + AC  + D     K+   +++   Q P    LLS + A
Sbjct: 490 LKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYA 547


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/705 (38%), Positives = 400/705 (56%), Gaps = 69/705 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+  Y K    +++RR+  EMP  D VS+ A+I G+ + GL + AI +F +M      
Sbjct: 80  NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           PS FT +  LS+      + +GR++H+FVVK      V VA +LL++Y+K    V A+ +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199

Query: 232 FG-------------------------------EMPEVDGVSYNVMITCYAWNEQYKESL 260
           F                                +MP+ D VS+N MI+ Y+      E+L
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEAL 259

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +F + L         F  +++LS  AN   L IG+QIH   +     +   V N+L+ M
Sbjct: 260 AIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISM 319

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                  A+EIF  L     V WTA
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  YVQ G   +AL LF  M       +  T A++L  S+ L  L  GKQ+H+  I++G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKS 464
             S     +AL+ MYAK+G++  A + F ++P  ++ IVSW ++I A AQ+G  +  +  
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINL 498

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           FE M+  G +PD ++ + VLSAC+H GL+E+G +Y+N MT+ +++ P   HYA M+D+  
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYG 558

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G   EA   +  MP EPD I W S++ SC+IHKN + AK AA++L  ++     A Y+
Sbjct: 559 RAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA-YL 617

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
           A++N+Y+  G+WE+ +Q +K M++RGVRK    SW+ +K++VH F   D +HPQ +EI +
Sbjct: 618 ALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYK 677

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
            +  + +E+KK G+ PDT   LHD +EE+K + LKYHSE+LAIAF L+NTPE + + +MK
Sbjct: 678 LMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMK 737

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH+AIK ISK+ GREI VRD++RFHHFKDG CSCRD+W
Sbjct: 738 NLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 292/634 (46%), Gaps = 100/634 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++T S N LISGY K GN   +R L   M D   VSWT +I GY+Q   F  A  +F
Sbjct: 71  MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M ++    P   T + +LS C+   T +   ++H+ ++K G  S + +  SL++ Y K
Sbjct: 131 AKMISE-RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189

Query: 121 IRCLD---------------------------------LARRVFKEMPQKDSVSFNALIT 147
             C D                                 LA   F++MP +D VS+N++I+
Sbjct: 190 --CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 148 GFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV----- 201
           G++++G N EA+ +F +M      KP +FT A+ LSA   L  + +G+Q+HA+++     
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 202 --------------KTNFVE--------------NVFVANALLDLYSKHDCVVEARKLFG 233
                         K+  VE              N+    +LLD Y+K   V  AR++F 
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
           ++ + D V++  MI  Y  N  + ++L+LFR +     + + +  + +LSV ++   L+ 
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH--ISTVPWTAMISAY 351
           G+QIH   I     S   V N+L+ MYAK G    AK +F +L +     V WT+MI A 
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMAL 486

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  +EA+NLF  M    +  D  T+  +L A   +  +  G++ ++ +     +   
Sbjct: 487 AQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPT 546

Query: 412 FSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA--QNGDAQATLKSFED 467
            S  A ++D+Y ++G L++A    + MP E + ++W +L+++C   +N D          
Sbjct: 547 LSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLL 606

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           ++  G     ++L +V SA   CG  E   Q    M  +     +KE   S + I     
Sbjct: 607 LIDPGNSGAYLALANVYSA---CGKWENAAQTRKLMKDR---GVRKEKGISWIHIKNEVH 660

Query: 528 CF----------DEAEKLMAQ-------MPFEPD 544
            F          DE  KLMA+       M F PD
Sbjct: 661 AFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPD 694



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 233/553 (42%), Gaps = 132/553 (23%)

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
           S+F FA  L   V + D   GR VH  ++K      V++ N L+  Y+K   +  A  +F
Sbjct: 10  SEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVF 68

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL----------------QFTRFDR--- 273
            EMP     S+N +I+ YA    ++ S +L  E+                QF  FD    
Sbjct: 69  DEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIW 128

Query: 274 ------------SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
                       SQF  S +LS  A    L IGR+IH+  +     S V VA SL++MYA
Sbjct: 129 MFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYA 188

Query: 322 KC-------------------------------GRFEEAKEIFANLSHISTVPWTAMISA 350
           KC                               G+FE A   F  +     V W +MIS 
Sbjct: 189 KCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISG 248

Query: 351 YVQKGNLEEALNLFIEMC-RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           Y Q+G   EAL +F +M    ++  D  T ASIL A A L  L++GKQ+H++++R+   +
Sbjct: 249 YSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETET 308

Query: 410 NVFSGSALLDMYAKS---------------------------------GSLKDAIQTFKE 436
           +   G+AL+ MYAKS                                 G++K A + F +
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNK 368

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           + +R++V+W A+I    QNG     L+ F  MV  G +P+S +L ++LS  S   ++E G
Sbjct: 369 LRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428

Query: 497 LQYF---------------NSMTQKYK--------------LRPKKE--HYASMVDILCR 525
            Q                 N++   Y                  KKE   + SM+  L +
Sbjct: 429 KQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQ 488

Query: 526 SGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA-A 581
            G   EA  L  +M     +PD I +  V+++C     +E  +K  + + ++ ++    +
Sbjct: 489 HGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS 548

Query: 582 PYVAMSNIYAVAG 594
            Y  M ++Y  AG
Sbjct: 549 HYACMIDLYGRAG 561


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 278/757 (36%), Positives = 438/757 (57%), Gaps = 17/757 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N ++S Y    +   A+  F+++  R   SWT L+  ++   Q +E  +    MR
Sbjct: 78  NLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR 137

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            DG   PD VTF T L  C +P++  + I++H  ++         + N+L++ Y K   L
Sbjct: 138 QDG-VRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSL 196

Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             A+RVF +M + ++ +S++ +    A  G   EA++ F  M  LG K +       LSA
Sbjct: 197 SHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSA 256

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV--DGV 241
               A +  GR +H+ +  + F   + VANA++ +Y +   V EARK+F  M E   D V
Sbjct: 257 CSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N+M++ Y  N++ K++++L++ +Q  R D+    + +LLS  ++  D+ +GR +H Q 
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQRMQL-RADK--VTYVSLLSACSSAEDVGLGRVLHKQI 373

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +       V V N+LV MYAKCG   EA+ +F  +   S + WT +ISAYV++  + EA 
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433

Query: 362 NLFIEMCR-------ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           +LF +M           +  D   F +IL A A++++L  GK +       G  S+   G
Sbjct: 434 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG 493

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           +A++++Y K G +++  + F  +  R ++  WNA+I+  AQ G +   LK F  M   G 
Sbjct: 494 TAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGV 553

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGCFDEA 532
           +PDS S +S+L ACSH GL ++G  YF SMT +Y+   +  +H+  + D+L R G   EA
Sbjct: 554 RPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEA 613

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
           E+ + ++P +PD + W+S++ +CR H++L+ AK+ A++L ++E  R A  YVA+SNIYA 
Sbjct: 614 EEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEP-RCATGYVALSNIYAE 672

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
             +W +V++V+K M E+GV+K    S +E+   +H F   D+ HP+  EIR ++  L  +
Sbjct: 673 LQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQ 732

Query: 653 MKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
           MK+ GY PDT   LH  DE+ K   L  HSERLAIA  LI+TP G+P+ V KNLR C+DC
Sbjct: 733 MKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDC 792

Query: 713 HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           H A KLISKI GR+I VRD +RFH FKDG CSC+D+W
Sbjct: 793 HTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 126/549 (22%), Positives = 239/549 (43%), Gaps = 72/549 (13%)

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSK 221
           ++++    +  + T+A  L        +  GR++H+  VK N +  N+ + N ++ +Y+ 
Sbjct: 32  LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
            D   +A+  F  + + +  S+  ++  +A + Q KE+L+    ++          F T 
Sbjct: 92  CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-S 340
           L    +   L+ G +IH   + +    + KV+N+L++MY KCG    AK +FA +    +
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            + W+ M  A+   GN+ EAL  F  M    I A ++   +IL A +  A +  G+ +HS
Sbjct: 212 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHS 271

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDA 458
            +  SGF S +   +A++ MY + G++++A + F  M E  R++VSWN ++SA   N   
Sbjct: 272 CIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRG 331

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACS------------------------------ 488
           +  ++ ++ M     + D V+ +S+LSACS                              
Sbjct: 332 KDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 388

Query: 489 -----HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM---- 539
                 CG   E    F+ M Q+  +      + +++    R     EA  L  QM    
Sbjct: 389 VSMYAKCGSHTEARAVFDKMEQRSII-----SWTTIISAYVRRRLVAEACHLFQQMLELE 443

Query: 540 ------PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
                   +PD + + +++N+C     LE  K  ++Q        D A   A+ N+Y   
Sbjct: 444 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 503

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+ E   ++              +  V  +  V ++ A   ++ Q  +    ++ L   M
Sbjct: 504 GEIEEGRRI--------------FDGVCSRPDVQLWNAMIAVYAQFGQSHEALK-LFWRM 548

Query: 654 KKEGYKPDT 662
           + EG +PD+
Sbjct: 549 EMEGVRPDS 557



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 10/254 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF--- 60
           +N +  N L+S Y K G+   AR +F+ M  R+ +SWT +I  Y ++    EA  LF   
Sbjct: 380 KNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM 439

Query: 61  VDMRTDGGSD---PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           +++  +G S    PD + F T+L+ C++     +   V       G +S   +  ++V+ 
Sbjct: 440 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 499

Query: 118 YCKIRCLDLARRVFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
           Y K   ++  RR+F  +  +  V  +NA+I  +A+ G + EA+KLF  M+  G +P  F+
Sbjct: 500 YGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 559

Query: 177 FAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           F + L A    GL D              N    +     + DL  +   + EA +   +
Sbjct: 560 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 619

Query: 235 MP-EVDGVSYNVMI 247
           +P + D V++  ++
Sbjct: 620 LPVKPDAVAWTSLL 633


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 409/688 (59%), Gaps = 34/688 (4%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA ++KF  +S+  + + L+  Y  I  L  + R+F  +    ++++ ++I  +   G
Sbjct: 27  QLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHG 85

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  +++  F+ M   G  P    F + L +   L D+ LG  +H ++++     +++  N
Sbjct: 86  LPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGN 145

Query: 214 ALLDLYSKHDCVVEA--------------------------------RKLFGEMPEVDGV 241
           AL+++YSK   + E+                                RK+F  MPE D V
Sbjct: 146 ALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLV 205

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +I   A N  Y+E+L++ RE+         F  S++L ++A  +D+  G++IH  +
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCS 265

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I     +++ VA+SL+DMYAKC R  ++  +F  L+    + W ++I+  VQ G  +E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             F +M  A I     +F+SI+ A A L +L LGKQLH ++ R+GF  N+F  S+L+DMY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G+++ A Q F  M  R++VSW A+I  CA +G A   ++ FE M   G +P+ V+ +
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFM 445

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           +VL+ACSH GL++E  +YFNSMT+ + + P  EHYA++ D+L R+G  +EA   +  M  
Sbjct: 446 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 505

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P   +W++++++CR+H N++ A+K A+++ +++   +   Y+ ++NIY+ A +W+  ++
Sbjct: 506 GPTGSIWATLLSACRVHXNIDMAEKVANRILEVDP-NNTGAYILLANIYSAARRWKEAAK 564

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + +MR  G+RK  A SW+E+K+KV+ F A DE HP   +IR  +E L++ M+KEGY PD
Sbjct: 565 WRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPD 624

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           TS   HD +EE K   +  HSERLAI F +INTP G  I V KNLR CTDCH A K ISK
Sbjct: 625 TSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISK 684

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I GREI VRD+SRFHHFK+G CSC D+W
Sbjct: 685 IVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 39/461 (8%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           LFN++    A++W  +I  Y+      ++   F+ M   G   PD+  F ++L  C+   
Sbjct: 62  LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG-LYPDHNVFPSVLKSCALLM 120

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL----------------------- 124
             N    +H  II+ G +  L   N+L++ Y K+R L                       
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180

Query: 125 ---------DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
                    D  R++F+ MP+KD VS+N +I G A+ GL EE +++  EM     KP  F
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T ++ L       DI+ G+++H   ++     +++VA++L+D+Y+K   V ++ ++F  +
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL 300

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
            E DG+S+N +I     N  + E L+ FR++   +     + FS+++   A+   L +G+
Sbjct: 301 TERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 360

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H           + +A+SLVDMYAKCG    AK+IF  +     V WTAMI      G
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSG 414
              +A+ LF +M    I  +   F ++L A +    +    K  +S     G    V   
Sbjct: 421 QAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 480

Query: 415 SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISAC 452
           +A+ D+  ++G L++A      M   P  +I  W  L+SAC
Sbjct: 481 AAVSDLLGRAGRLEEAYDFICGMHIGPTGSI--WATLLSAC 519



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 24  TARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTFATLLS 81
           + R++F  M ++  VSW  +I G ++   + E  ++  +M   GG++  PD  T +++L 
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLP 247

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             +E    +   ++H   I+ G ++ + + +SL+D Y K   +  + RVF  + ++D +S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N++I G  + GL +E ++ F +M     KP  ++F++ + A   L  + LG+Q+H ++ 
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           +  F EN+F+A++L+D+Y+K   +  A+++F  M   D VS+  MI   A + Q  ++++
Sbjct: 368 RNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE 427

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
           LF +++      +   F  +L+  ++  L  +  +  ++ T        V+   ++ D+ 
Sbjct: 428 LFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487

Query: 321 AKCGRFEEAKEIFANLSHISTVP--WTAMISAYVQKGNLEEA 360
            + GR EEA +    + HI      W  ++SA     N++ A
Sbjct: 488 GRAGRLEEAYDFICGM-HIGPTGSIWATLLSACRVHXNIDMA 528



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 1/172 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +A +  +F  + +R  +SW  +I G  Q   F E  + F  M       P
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM-AKIKP 338

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              +F++++  C+   T +   Q+H  I + G++  + I +SLVD Y K   +  A+++F
Sbjct: 339 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIF 398

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             M  +D VS+ A+I G A  G   +AI+LF +M+  G KP+   F A L+A
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    + L+  Y K GN+ TA+++F+ M  R  VSWT +I G +   Q  +A +LF  
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M T+ G  P++V F  +L+ CS     +E
Sbjct: 432 METE-GIKPNHVAFMAVLTACSHGGLVDE 459



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAI 431
           ++ +A   ++LR    + S S  +QLH+ V++  F + ++ + S LL +Y+    L D++
Sbjct: 3   TSTEALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSL 60

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           + F  +     ++W ++I     +G    +L SF  M+ SG  PD     SVL +C+
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/741 (35%), Positives = 418/741 (56%), Gaps = 9/741 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y   G+++ +R  F+ +  +   +W  +I  Y +   FREA   F  +        
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  +L  C    T  +  ++H  + K G+   + +  SL+  Y +   + +AR +F
Sbjct: 174 DFYTFPPVLKACQ---TLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MP +D  S+NA+I+G  + G   +A+ +  EM+  G      T A+ L     L DI+
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIS 290

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
               +H +V+K      +FV+NAL+++Y+K   + +A+K+F +M   D VS+N +I  Y 
Sbjct: 291 TATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-V 310
            N+    +   F ++Q    +       +L S+ A   D +  R +H   +    + E V
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV 410

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF--IEMC 368
            + N+++DMYAK G  + A ++F  +     V W  +IS Y Q G   EA+ ++  +E C
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEEC 470

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R  I  +Q T+ SIL A A + +L  G ++H  +I++    +VF G+ L+D+Y K G L 
Sbjct: 471 R-EIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLV 529

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA+  F ++P  + V WNA+IS    +G  +  LK F +M   G +PD V+ +S+LSACS
Sbjct: 530 DAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACS 589

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL++EG  +F+ M Q+Y ++P  +HY  MVD+L R+G  + A   +  MP  PD  +W
Sbjct: 590 HSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIW 648

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CRIH N+E  K A+D+LF+++   +   YV +SNIYA  G+WE V +V+   RE
Sbjct: 649 GALLGACRIHGNIELGKFASDRLFEVDS-ENVGYYVLLSNIYANVGKWEGVDKVRSLARE 707

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           RG++K   +S +E+  +V +F   ++ HP+  EI  ++  L  +MK  GY PD S  L D
Sbjct: 708 RGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQD 767

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +E+ K   L  HSERLAIAF +I+TP  S I + KNLR C DCH A K IS+IT REI 
Sbjct: 768 VEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIV 827

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRDS RFHHFK+G CSC D+W
Sbjct: 828 VRDSKRFHHFKNGICSCGDYW 848



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 267/542 (49%), Gaps = 11/542 (2%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           + F +L   C++   A  L   HA ++  G      I   LV+ Y  +  + L+R  F +
Sbjct: 77  IDFNSLFDSCTKTLLAKRL---HALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIAL 192
           + +KD  ++N++I+ + + G   EAI  F ++  +  F+   +TF   L A   L D   
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD--- 190

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H +V K  F  +VFVA +L+ +YS+   V  AR LF +MP  D  S+N MI+    
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQ 250

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N    ++L +  E++    +      +++L V A   D+     IH   I      E+ V
Sbjct: 251 NGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFV 310

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           +N+L++MYAK G   +A+++F  +     V W ++I+AY Q  +   A   F +M    +
Sbjct: 311 SNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGL 370

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAI 431
             D  T  S+   +A+       + +H F++R G+ M  V  G+A++DMYAK G +  A 
Sbjct: 371 EPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAH 430

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSHC 490
           + F  +P +++VSWN LIS   QNG A   ++ +  M +    + +  + +S+L+A +H 
Sbjct: 431 KVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHV 490

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G +++G++    +  K  L         ++D+  + G   +A  L  Q+P E   + W++
Sbjct: 491 GALQQGMRIHGHLI-KTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNA 548

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           +I+   IH + E A K   ++       D   ++++ +  + +G  +        M+E G
Sbjct: 549 IISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYG 608

Query: 611 VR 612
           ++
Sbjct: 609 IK 610



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 180/353 (50%), Gaps = 4/353 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y K GNL  A+++F  M  R  VSW  +I  Y Q +    A   F  M+ + G
Sbjct: 311 SNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN-G 369

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLA 127
            +PD +T  +L S  ++         VH  I++ G+    ++I N+++D Y K+  +D A
Sbjct: 370 LEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSA 429

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVG 186
            +VF  +P KD VS+N LI+G+ + GL  EAI+++  M+     K +  T+ + L+A   
Sbjct: 430 HKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAH 489

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +  +  G ++H  ++KTN   +VFV   L+DLY K   +V+A  LF ++P    V +N +
Sbjct: 490 VGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAI 549

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+C+  +   +++LKLFRE+Q          F +LLS  ++   +  G+           
Sbjct: 550 ISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGI 609

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
              +K    +VD+  + G  E A +   ++  H     W A++ A    GN+E
Sbjct: 610 KPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/706 (38%), Positives = 409/706 (57%), Gaps = 71/706 (10%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++ +Y K   +D +   F  +PQ+DSVS+  +I G+   G   +AI++  EM   G +
Sbjct: 84  NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           PS FT    L++      +  G++VH+F+VK     NV V+N+LL++Y+K    + A+ +
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203

Query: 232 FG-------------------------------EMPEVDGVSYNVMITCYAWNEQYKESL 260
           F                                +M E D V++N MI+ Y        +L
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA--ISEVKVANSLV 317
            +F + L+ +     +F  +++LS  AN   L IG QIH+  IVTT   IS + V N+L+
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSH-IVTTGFDISGI-VLNALI 321

Query: 318 DMYAKCGRFE---------------------------------EAKEIFANLSHISTVPW 344
            MY++CG  E                                 EAK IF +L     V W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           TAMI  Y Q G   EA+NLF  M       +  T A++L  ++ LASL  GKQ+H   ++
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
           SG + +V   +AL+ MYAK+GS+  A + F  +  ER+ VSW ++I A AQ+G A+  L+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            FE M+  G +PD ++ + V SAC+H GL+ +G QYF+ M    K+ P   HYA MVD+ 
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            R+G   EA++ + +MP EPD + W S++++CR++KN++  K AA++L  +E   ++  Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEP-ENSGAY 620

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            A++N+Y+  G+WE  ++++K+M++  V+K   +SW+E+K KVH F   D +HPQ NEI 
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIY 680

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
             ++ +  E+KK GY PDT+  LHD +EE+K + L++HSE+LAIAF LI+TP+ + + +M
Sbjct: 681 ITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C DCH AIK ISK+ GREI VRD++RFHHFKDGFCSCRD+W
Sbjct: 741 KNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/591 (26%), Positives = 273/591 (46%), Gaps = 75/591 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +   S N ++S Y K G++ ++ E F+ +  R +VSWT +I GY    Q+ +A ++ 
Sbjct: 75  MPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIM 134

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M  + G +P   T   +L+  +         +VH+ I+K G    + + NSL++ Y K
Sbjct: 135 GEMMRE-GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193

Query: 121 -------------------------------IRCLDLARRVFKEMPQKDSVSFNALITGF 149
                                          +  +DLA   F++M ++D V++N++I+G+
Sbjct: 194 CGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGY 253

Query: 150 AKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + G +  A+ +F +M +     P  FT A+ LSA   L  + +G Q+H+ +V T F  +
Sbjct: 254 NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDIS 313

Query: 209 VFVANALLDLYSKHDCVVEARKL-----------------------FGEMPEV------- 238
             V NAL+ +YS+   V  AR+L                        G+M E        
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSL 373

Query: 239 ---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D V++  MI  Y  +  Y E++ LFR +       + +  + +LSV ++   L  G+
Sbjct: 374 KDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGK 433

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           QIH   + +  I  V V+N+L+ MYAK G    A   F  +     TV WT+MI A  Q 
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ EEAL LF  M    +  D  T+  +  A      ++ G+Q    +     +    S 
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            A ++D++ ++G L++A +  ++MP E ++V+W +L+SAC    +      + E ++   
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLL-- 611

Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
            +P++    S L+   S CG  EE  +   SM      R KKE   S +++
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG---RVKKEQGFSWIEV 659



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 216/496 (43%), Gaps = 99/496 (19%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-------------------- 235
           VH  V+K+  V +V++ N L+++YSK    + ARKLF EM                    
Sbjct: 36  VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95

Query: 236 -----------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
                      P+ D VS+  MI  Y    QY +++++  E+     + SQF  + +L+ 
Sbjct: 96  MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLAS 155

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI------------ 332
           VA    L+ G+++H+  +       V V+NSL++MYAKCG    AK +            
Sbjct: 156 VAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSW 215

Query: 333 -------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANI 372
                              F  ++    V W +MIS Y Q+G    AL++F +M R + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSML 275

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGF------------MSNVFSG------ 414
           S D+ T AS+L A A L  L +G+Q+HS ++ +GF            M +   G      
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335

Query: 415 ---------------SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
                          +ALLD Y K G + +A   F  + +R++V+W A+I    Q+G   
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYG 395

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             +  F  MV    +P+S +L ++LS  S    +  G Q   S  +  ++       A +
Sbjct: 396 EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNA-L 454

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR- 578
           + +  ++G    A +    +  E D + W+S+I +   H + E A +  + +  ME LR 
Sbjct: 455 ITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRP 513

Query: 579 DAAPYVAMSNIYAVAG 594
           D   YV + +    AG
Sbjct: 514 DHITYVGVFSACTHAG 529



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 228/533 (42%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N +I+ +++ G +  A   F  M +R  V+W  +I GY+Q+     A  +F
Sbjct: 207 MVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMF 266

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV----- 115
             M  D    PD  T A++LS C+  +      Q+H+ I+  G++   I+ N+L+     
Sbjct: 267 SKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSR 326

Query: 116 ----------------------------DSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                       D Y K+  ++ A+ +F  +  +D V++ A+I 
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIV 386

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + GL  EAI LF  M     +P+ +T AA LS    LA +  G+Q+H   VK+  + 
Sbjct: 387 GYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +V V+NAL+ +Y+K   +  A + F  +  E D VS+  MI   A +   +E+L+LF  +
Sbjct: 447 SVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
                      +  + S   +   +  GRQ                     DM       
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQ-------------------YFDM------M 541

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           ++  +I   LSH     +  M+  + + G L+EA   FIE  +  I  D  T+ S+L A 
Sbjct: 542 KDVDKIIPTLSH-----YACMVDLFGRAGLLQEAQE-FIE--KMPIEPDVVTWGSLLSAC 593

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
               ++ LGK     ++    +    SG  SAL ++Y+  G  ++A +  K M +  +  
Sbjct: 594 RVYKNIDLGKVAAERLL---LLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKK 650

Query: 443 ---VSWNALISAC----------AQNGDAQATLKSFEDMVQS-GYQPDSVSLL 481
               SW  +               Q  +   T+K   D ++  GY PD+ S+L
Sbjct: 651 EQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVL 703



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 71/285 (24%)

Query: 276 FPFSTLLSVVANKLDLQIGRQ--------IHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
              STLL +  N L   + +         +H + I +  +  V + N+L+++Y+K G   
Sbjct: 7   LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYAL 66

Query: 328 EAK-------------------------------EIFANLSHISTVPWTAMISAYVQKGN 356
            A+                               E F  L    +V WT MI  Y   G 
Sbjct: 67  HARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQ 126

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
             +A+ +  EM R  I   Q T  ++L + A    L  GK++HSF+++ G   NV   ++
Sbjct: 127 YHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNS 186

Query: 417 LLDMYAKSGS------------LKD-------------------AIQTFKEMPERNIVSW 445
           LL+MYAK G             +KD                   A+  F++M ER+IV+W
Sbjct: 187 LLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246

Query: 446 NALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSH 489
           N++IS   Q G     L  F  M++ S   PD  +L SVLSAC++
Sbjct: 247 NSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACAN 291



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 107/217 (49%), Gaps = 12/217 (5%)

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H  VI+SG + +V+  + L+++Y+K+G    A + F EMP R   SWN ++SA A+ GD
Sbjct: 36  VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             ++ + F+ + Q     DSVS  +++    + G   + ++    M ++  + P +    
Sbjct: 96  MDSSCEFFDRLPQR----DSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE-GIEPSQFTLT 150

Query: 518 SMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +++  +  + C +  +K+   + ++    +  + +S++N      +   AK   D++   
Sbjct: 151 NVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV-- 208

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
             ++D + + AM  ++   GQ +      + M ER +
Sbjct: 209 --VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/742 (35%), Positives = 432/742 (58%), Gaps = 3/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT-DGG 68
           N LI+ Y K G +  A ++F+ M  R  VSW  +I G+S+    ++ F + V+M   + G
Sbjct: 70  NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T  T+L  C+        I++H   +K G +  + + NSLVD Y K   L  A+
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGL 187
            +F +  +K++VS+N +I G   +G   EA  LF EMQ     + ++ T    L A + +
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           + +   +++H + ++  F  +  VAN  +  Y+K   ++ A ++F  M      S+N +I
Sbjct: 250 SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A N   +++L L+ ++ ++      F   +LL   A+   L+ G+++H   +     
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  +  SL+ +Y  CG    A+ +F  +   S+V W AMIS Y Q G  E+AL LF ++
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
                        S+L A ++ ++L LGK+ H + +++  M +VF   + +DMYAKSG +
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCI 489

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K++   F  +  +++ SWNA+I+A   +GD + +++ FE M + G  PD  + + +L+ C
Sbjct: 490 KESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVC 549

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+EEGL+YFN M   + + PK EHYA ++D+L R+G  D+A +L+ +MP +PD  +
Sbjct: 550 SHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRV 609

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           WSS+++ CR    LE  +  A++L ++E  ++   YV++SN+YA +G+W+ V +V++ ++
Sbjct: 610 WSSLLSFCRNFGELEIGQIVAEKLLELEP-KNVENYVSLSNLYAGSGRWDDVRRVRQMIK 668

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           + G++K    SW+EL  KVH F A D L PQ+ E+      L ++M K GYKP+TS  LH
Sbjct: 669 DIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLH 728

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE K+E L+ HSE+LAI F L+NT +G+ + + KNLR C DCH A K +S++TGREI
Sbjct: 729 DVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREI 788

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD+ RFHHFKDG CSC D+W
Sbjct: 789 IIRDNKRFHHFKDGLCSCGDYW 810



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 271/549 (49%), Gaps = 13/549 (2%)

Query: 53  FREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN 112
           + +A  +FV + TD   + D  TF  ++  C+          +H  +IK G    + + N
Sbjct: 11  YSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGN 70

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ--HLGF 170
           +L+  Y K   +D A +VF  MP ++ VS+N++I+GF++ G +++   + VEM     G 
Sbjct: 71  ALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGL 130

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            P   T    L       D+ +G ++H   VK    E+V V N+L+D+YSK   + EA+ 
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM 190

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKL 289
           LF +    + VS+N MI          E+  LFRE+Q     + ++     +L       
Sbjct: 191 LFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEIS 250

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L+  +++H  +I      +  VAN  V  YAKCG    A+ +F ++   +   W A+I 
Sbjct: 251 QLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIG 310

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
              Q G+  +ALNL+I+M  + +  D  T  S+L ASA L SL  GK++H FV+R G   
Sbjct: 311 GCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEI 370

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           + F G +LL +Y   G    A   F  M E++ VSWNA+IS  +QNG  +  L  F  +V
Sbjct: 371 DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLV 430

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH----YASMVDILCR 525
             G+QP  ++++SVL ACS    +  G +     T  Y L+           S +D+  +
Sbjct: 431 SDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALKALLMEDVFVACSTIDMYAK 485

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           SGC  E+  +   +    D   W+++I +  +H + E + +  +++ K+ ++ D   ++ 
Sbjct: 486 SGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIG 544

Query: 586 MSNIYAVAG 594
           +  + + AG
Sbjct: 545 ILTVCSHAG 553



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 246/552 (44%), Gaps = 67/552 (12%)

Query: 154 LNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           L  +AI +FV++     F   +FTF   + A  G  D  LG  +H  V+K   + +VFV 
Sbjct: 10  LYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVG 69

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           NAL+ +Y K   V  A K+F  MP  + VS+N +I+ ++ N   K+   +  E+     +
Sbjct: 70  NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG--E 127

Query: 273 RSQFP----FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
               P      T+L V A ++D+Q+G +IH   +      +V+V NSLVDMY+KCG   E
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASA 387
           A+ +F   +  + V W  MI     KG + EA NLF EM  + +I  ++ T  +IL A  
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
           E++ L   K+LH + IR GF  +    +  +  YAK G L  A + F  M  + + SWNA
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSL--------------------------- 480
           LI  CAQNGD +  L  +  M  SG  PD  ++                           
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367

Query: 481 --------LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
                   +S+LS   HCG        F+ M +K  +      + +M+    ++G  ++A
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS-----WNAMISGYSQNGLPEDA 422

Query: 533 EKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
             L  ++    F+P +I   SV+ +C     L   K+      K   + D     +  ++
Sbjct: 423 LILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDM 482

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA +G  +    V   ++ + +      SW  + +   V    +E           IE L
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLA-----SWNAIIAAYGVHGDGEE----------SIE-L 526

Query: 650 MQEMKKEGYKPD 661
            + M+K G  PD
Sbjct: 527 FERMRKVGQMPD 538


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/705 (38%), Positives = 400/705 (56%), Gaps = 69/705 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+  Y K    +++RR+  EMP  D VS+ A+I G+ + GL + AI +F +M      
Sbjct: 80  NTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVP 139

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           PS FT +  LS+      + +GR++H+FVVK      V VA +LL++Y+K    V A+ +
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199

Query: 232 FG-------------------------------EMPEVDGVSYNVMITCYAWNEQYKESL 260
           F                                +MP+ D VS+N MI+ Y+      E+L
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEAL 259

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +F + L         F  +++LS  AN   L IG+QIH   +     +   V N+L+ M
Sbjct: 260 VIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISM 319

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                  A+EIF  L     V WTA
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  YVQ G   +AL LF  M       +  T A++L  S+ L  L  GKQ+H+  I++G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKS 464
             S     +AL+ MYAK+G++  A + F ++P  ++ IVSW ++I A AQ+G  +  +  
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINL 498

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           FE M+  G +PD ++ + VLSAC+H GL+E+G +Y+N MT+ +++ P   HYA M+D+  
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYG 558

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G   EA   +  MP EPD I W S++ SC+IHKN + AK AA++L  ++     A Y+
Sbjct: 559 RAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGA-YL 617

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
           A++N+Y+  G+WE+ +Q +K M++RGVRK    SW+ +K++VH F   D +HPQ +EI +
Sbjct: 618 ALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYK 677

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
            +  + +E+KK G+ PDT   LHD +EE+K + LKYHSE+LAIAF L+NTPE + + +MK
Sbjct: 678 LMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMK 737

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH+AIK ISK+ GREI VRD++RFHHFKDG CSCRD+W
Sbjct: 738 NLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 292/634 (46%), Gaps = 100/634 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++T S N LISGY K GN   +R L   M D   VSWT +I GY+Q   F  A  +F
Sbjct: 71  MPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMF 130

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M ++    P   T + +LS C+   T +   ++H+ ++K G  S + +  SL++ Y K
Sbjct: 131 AKMISE-RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAK 189

Query: 121 IRCLD---------------------------------LARRVFKEMPQKDSVSFNALIT 147
             C D                                 LA   F++MP +D VS+N++I+
Sbjct: 190 --CGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 148 GFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV----- 201
           G++++G N EA+ +F +M      KP +FT A+ LSA   L  + +G+Q+HA+++     
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 202 --------------KTNFVE--------------NVFVANALLDLYSKHDCVVEARKLFG 233
                         K+  VE              N+    +LLD Y+K   V  AR++F 
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
           ++ + D V++  MI  Y  N  + ++L+LFR +     + + +  + +LSV ++   L+ 
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH--ISTVPWTAMISAY 351
           G+QIH   I     S   V N+L+ MYAK G    AK +F +L +     V WT+MI A 
Sbjct: 428 GKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMAL 486

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  +EA+NLF  M    +  D  T+  +L A   +  +  G++ ++ +     +   
Sbjct: 487 AQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPT 546

Query: 412 FSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA--QNGDAQATLKSFED 467
            S  A ++D+Y ++G L++A    + MP E + ++W +L+++C   +N D          
Sbjct: 547 LSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLL 606

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           ++  G     ++L +V SA   CG  E   Q    M  +     +KE   S + I     
Sbjct: 607 LIDPGNSGAYLALANVYSA---CGKWENAAQTRKLMKDR---GVRKEKGISWIHIKNEVH 660

Query: 528 CF----------DEAEKLMAQ-------MPFEPD 544
            F          DE  KLMA+       M F PD
Sbjct: 661 AFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPD 694



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 233/553 (42%), Gaps = 132/553 (23%)

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
           S+F FA  L   V + D   GR VH  ++K      V++ N L+  Y+K   +  A  +F
Sbjct: 10  SEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVF 68

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL----------------QFTRFDR--- 273
            EMP     S+N +I+ YA    ++ S +L  E+                QF  FD    
Sbjct: 69  DEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIW 128

Query: 274 ------------SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
                       SQF  S +LS  A    L IGR+IH+  +     S V VA SL++MYA
Sbjct: 129 MFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYA 188

Query: 322 KC-------------------------------GRFEEAKEIFANLSHISTVPWTAMISA 350
           KC                               G+FE A   F  +     V W +MIS 
Sbjct: 189 KCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISG 248

Query: 351 YVQKGNLEEALNLFIEMC-RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           Y Q+G   EAL +F +M    ++  D  T ASIL A A L  L++GKQ+H++++R+   +
Sbjct: 249 YSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETET 308

Query: 410 NVFSGSALLDMYAKS---------------------------------GSLKDAIQTFKE 436
           +   G+AL+ MYAKS                                 G++K A + F +
Sbjct: 309 SGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNK 368

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           + +R++V+W A+I    QNG     L+ F  MV  G +P+S +L ++LS  S   ++E G
Sbjct: 369 LRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428

Query: 497 LQYF---------------NSMTQKYK--------------LRPKKE--HYASMVDILCR 525
            Q                 N++   Y                  KKE   + SM+  L +
Sbjct: 429 KQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQ 488

Query: 526 SGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA-A 581
            G   EA  L  +M     +PD I +  V+++C     +E  +K  + + ++ ++    +
Sbjct: 489 HGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS 548

Query: 582 PYVAMSNIYAVAG 594
            Y  M ++Y  AG
Sbjct: 549 HYACMIDLYGRAG 561


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/675 (38%), Positives = 390/675 (57%), Gaps = 34/675 (5%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L   N+L+ +    R L     +F  M Q+D VS+NA+I GF+  G + +A+++++ +  
Sbjct: 72  LFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQ 131

Query: 168 L--GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
                +PS  T +  + A   L D ALG+Q H  +++  F  N FV + L+D+Y+K   V
Sbjct: 132 ADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLV 191

Query: 226 V-------------------------------EARKLFGEMPEVDGVSYNVMITCYAWNE 254
                                           EAR+LF  M + D +++  M+T +  N 
Sbjct: 192 GDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNG 251

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L++FR ++F      Q+ F ++L+       L+ G+QIH   I T     V V +
Sbjct: 252 LESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGS 311

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +LVDMY+KC   + A+ +F  ++  + + WTA+I  Y Q G  EEA+ +F EM R  I  
Sbjct: 312 ALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  S++ + A LASL  G Q H   + SG M  +   +AL+ +Y K GS++DA + F
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EM   + VSW AL+S  AQ G A+ T+  FE M+  G +PD V+ + VLSACS  G +E
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +G  YF+SM + + + P  +HY  M+D+  RSG   EAE+ + QMP  PD I W +++++
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR+  ++E  K AA+ L +++  ++ A YV + +++A  GQW  V+Q+++ MR+R V+K 
Sbjct: 552 CRLRGDMEIGKWAAENLLEIDP-QNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKE 610

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              SW++ K+KVH+F+A+D+ HP +  I  K+E L  +M +EGYKPD S  LHD  +  K
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
           V  + +HSE+LAIAF LI  P+  PI ++KNLR C DCH A K ISKITGR+I VRD+ R
Sbjct: 671 VHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 730

Query: 735 FHHFKDGFCSCRDFW 749
           FH F DG CSC DFW
Sbjct: 731 FHKFSDGVCSCGDFW 745



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/596 (27%), Positives = 290/596 (48%), Gaps = 57/596 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+ N  + N L+S    +  L+    LF SM  R  VS+  +I G+S      +A +++
Sbjct: 67  MPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY 126

Query: 61  VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           + + + D    P  +T +T++   S         Q H  I++ G+ +   + + LVD Y 
Sbjct: 127 LALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYA 186

Query: 120 K-----------------------------IRC--LDLARRVFKEMPQKDSVSFNALITG 148
           K                             +RC  ++ ARR+F+ M  +DS+++  ++TG
Sbjct: 187 KMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTG 246

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           F + GL  EA+++F  M+  G     +TF + L+A   L+ +  G+Q+HA++++T + +N
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           VFV +AL+D+YSK   +  A  +F  M   + +S+  +I  Y  N   +E++++F E+Q 
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
              D   +   +++S  AN   L+ G Q H   +V+  +  + V+N+LV +Y KCG  E+
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  +S    V WTA++S Y Q G  +E ++LF +M    +  D  TF  +L A + 
Sbjct: 427 AHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSR 486

Query: 389 LASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWN 446
              +  G+   HS     G +      + ++D+Y++SG LK+A +  K+MP   + + W 
Sbjct: 487 AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            L+SAC   GD +    + E++++   Q P S  LL  + A    G   E  Q    M  
Sbjct: 547 TLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAK--GQWNEVAQLRRGMRD 604

Query: 506 KYKLRPKKE------HYASMVDIL--------CRSGCFDEAEKLMAQM---PFEPD 544
           +   + KKE       Y + V I         C  G +++ E L ++M    ++PD
Sbjct: 605 R---QVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPD 657



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 201/406 (49%), Gaps = 50/406 (12%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           N+F  NALL   +    + +   LF  M + D VSYN +I  ++    + ++++++  L 
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY--LA 128

Query: 268 FTRFDRSQFP----FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK- 322
             + D S  P     ST++   +   D  +G+Q H Q +     +   V + LVDMYAK 
Sbjct: 129 LLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKM 188

Query: 323 ------------------------------CGRFEEAKEIFANLSHISTVPWTAMISAYV 352
                                         C   EEA+ +F  ++   ++ WT M++ + 
Sbjct: 189 SLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFT 248

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           Q G   EAL +F  M    I+ DQ TF SIL A   L++L  GKQ+H+++IR+ +  NVF
Sbjct: 249 QNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVF 308

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            GSAL+DMY+K  S+K A   F+ M  +NI+SW ALI    QNG ++  ++ F +M + G
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS----MVDILCRSGC 528
             PD  +L SV+S+C++   +EEG Q+         L     HY +    +V +  + G 
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQF-----HCLALVSGLMHYITVSNALVTLYGKCGS 423

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
            ++A +L  +M F  D++ W+++++    +     AK+  D   KM
Sbjct: 424 IEDAHRLFDEMSFH-DQVSWTALVSG---YAQFGRAKETIDLFEKM 465



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 179/451 (39%), Gaps = 125/451 (27%)

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSH---------IST----------------------V 342
           N L+  Y K GR   A+ +F  + H         +ST                      V
Sbjct: 45  NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRAN--ISADQATFASILRASAELASLSLGKQLHS 400
            + A+I+ +   G+  +A+ +++ + +A+  +   + T ++++ A++ L   +LGKQ H 
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV----------------- 443
            ++R GF +N F GS L+DMYAK   + DA + F E+  +N+V                 
Sbjct: 165 QILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224

Query: 444 --------------SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
                         +W  +++   QNG     L+ F  M   G   D  +  S+L+AC  
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHY----ASMVDIL--CRS----------------- 526
              +E+G Q        Y +R + +      +++VD+   CRS                 
Sbjct: 285 LSALEQGKQ-----IHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNII 339

Query: 527 ------------GCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                       GC +EA ++ ++M     +PD+    SVI+SC    NL   ++ A Q 
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSC---ANLASLEEGA-QF 395

Query: 572 FKMEKLRDAAPYVAMSN-IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
             +  +     Y+ +SN +  + G+  S+    +   E         SW  L S      
Sbjct: 396 HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV--SWTALVSG----- 448

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                + Q    +  I+ L ++M  +G KPD
Sbjct: 449 -----YAQFGRAKETID-LFEKMLAKGVKPD 473


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/713 (37%), Positives = 419/713 (58%), Gaps = 3/713 (0%)

Query: 38   VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHA 97
            + W   +  + Q+ +  EA   FVDM  +     D +TF  +L+  +  +      Q+H 
Sbjct: 901  IVWNKALSRFLQRGEAWEAVDCFVDM-INSRVACDGLTFVVMLTVVAGLNCLELGKQIHG 959

Query: 98   DIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
             +++ G + ++ + N L++ Y K   +  AR VF +M + D +S+N +I+G    GL E 
Sbjct: 960  IVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC 1019

Query: 158  AIKLFVEMQHLGFKPSDFTFAAALSAGVGL-ADIALGRQVHAFVVKTNFVENVFVANALL 216
            ++ +FV +      P  FT A+ L A   L     L  Q+HA  +K   V + FV+ AL+
Sbjct: 1020 SVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALI 1079

Query: 217  DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
            D+YSK   + EA  LF      D  S+N ++  Y  +  + ++L+L+  +Q +     Q 
Sbjct: 1080 DVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQI 1139

Query: 277  PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
                        + L+ G+QIH   +      ++ V + ++DMY KCG  E A+ +F+ +
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 337  SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                 V WT MIS  V+ G  E AL  + +M  + +  D+ TFA++++A + L +L  G+
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGR 1259

Query: 397  QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            Q+H+ +++     + F  ++L+DMYAK G+++DA   FK    R I SWNA+I   AQ+G
Sbjct: 1260 QIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHG 1319

Query: 457  DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            +A+  L+ F+ M   G  PD V+ + VLSACSH GL+ E  + F SM + Y + P+ EHY
Sbjct: 1320 NAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHY 1379

Query: 517  ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            + +VD L R+G  +EAEK+++ MPFE    M+ +++N+CR+  + E  K+ A++L  +E 
Sbjct: 1380 SCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEP 1439

Query: 577  LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
              D+A YV +SN+YA A QWE+V+  +  MR+  V+K   +SWV+LK+KVH+F A D  H
Sbjct: 1440 -SDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSH 1498

Query: 637  PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
             +T+ I  K+E +M+ +++EGY PDT  AL D +EE K  SL YHSE+LAIA+ L+ TP 
Sbjct: 1499 EETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPP 1558

Query: 697  GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             + + V+KNLR C DCH+AIK ISK+  REI +RD++RFHHF++G CSC D+W
Sbjct: 1559 STTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 268/556 (48%), Gaps = 44/556 (7%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYS-QKNQFREAFKLFVDMRT 65
            TN LI+ Y K G+L++AR+LF++  D  R  V+W  ++   +   ++  + F LF  +R 
Sbjct: 694  TNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRR 753

Query: 66   DGGSDPDYVTFATLLSGC--SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               S   + T A +   C  S   +A+E   +H   +K G    + +  +LV+ Y K   
Sbjct: 754  SVVSTTRH-TLAPVFKMCLLSASPSASE--SLHGYAVKIGLQWDVFVAGALVNIYAKFGL 810

Query: 124  LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            +  AR +F  M  +D V +N ++  +    L  EA+ LF E    GF+P D T       
Sbjct: 811  IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRT---- 866

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG--- 240
                    L R V     K N +E        L  +  +     A KLF  M + DG   
Sbjct: 867  --------LSRVVKC---KKNILE--------LKQFKAY-----ATKLF--MYDDDGSDV 900

Query: 241  VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            + +N  ++ +    +  E++  F ++  +R       F  +L+VVA    L++G+QIH  
Sbjct: 901  IVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGI 960

Query: 301  TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             + +     V V N L++MY K G    A+ +F  ++ +  + W  MIS     G  E +
Sbjct: 961  VMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECS 1020

Query: 361  LNLFIEMCRANISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            + +F+ + R ++  DQ T AS+LRA + L     L  Q+H+  +++G + + F  +AL+D
Sbjct: 1021 VGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALID 1080

Query: 420  MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            +Y+K G +++A   F      ++ SWNA++     +GD    L+ +  M +SG + D ++
Sbjct: 1081 VYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT 1140

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L++   A      +++G Q  +++  K          + ++D+  + G  + A ++ +++
Sbjct: 1141 LVNAAKAAGGLVGLKQGKQ-IHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 540  PFEPDEIMWSSVINSC 555
            P  PD++ W+++I+ C
Sbjct: 1200 P-SPDDVAWTTMISGC 1214



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 234/519 (45%), Gaps = 44/519 (8%)

Query: 94   QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAK 151
            + HA I+  G++    + N+L+  Y K   L  AR++F   P   +D V++NA+++  A 
Sbjct: 677  RAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAA 736

Query: 152  EG-LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                + +   LF  ++      +  T A      +  A  +    +H + VK     +VF
Sbjct: 737  HADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVF 796

Query: 211  VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
            VA AL+++Y+K   + EAR LF  M   D V +NVM+  Y       E++ LF E   T 
Sbjct: 797  VAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTG 856

Query: 271  FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            F        TL  VV  K ++               + + K   + + MY   G      
Sbjct: 857  FRPDDVTLRTLSRVVKCKKNI-------------LELKQFKAYATKLFMYDDDGS----- 898

Query: 331  EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
                       + W   +S ++Q+G   EA++ F++M  + ++ D  TF  +L   A L 
Sbjct: 899  ---------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLN 949

Query: 391  SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
             L LGKQ+H  V+RSG    V  G+ L++MY K+GS+  A   F +M E +++SWN +IS
Sbjct: 950  CLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMIS 1009

Query: 451  ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             C  +G  + ++  F  +++    PD  ++ SVL ACS      EG  Y  +      ++
Sbjct: 1010 GCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMK 1065

Query: 511  PKK--EHYAS--MVDILCRSGCFDEAEKLMA-QMPFEPDEIMWSSVINSCRIHKNLEFAK 565
                 + + S  ++D+  + G  +EAE L   Q  F  D   W+++++   +  +     
Sbjct: 1066 AGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF--DLASWNAIMHGYIVSGDF---P 1120

Query: 566  KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            KA      M++  + +  + + N    AG    + Q K+
Sbjct: 1121 KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQ 1159



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 166/380 (43%), Gaps = 32/380 (8%)

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-- 238
            L   +  +D++LG++ HA ++ +    + FV N L+ +Y+K   +  ARKLF   P+   
Sbjct: 663  LRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNR 722

Query: 239  DGVSYNVMITCYAWN-EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V++N +++  A + ++  +   LFR L+ +    ++   + +  +            +
Sbjct: 723  DLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL 782

Query: 298  HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            H   +      +V VA +LV++YAK G   EA+ +F  ++    V W  M+ AYV     
Sbjct: 783  HGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLE 842

Query: 358  EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
             EA+ LF E  R     D  T  ++ R      ++   KQ  ++  +             
Sbjct: 843  YEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK------------- 889

Query: 418  LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
            L MY   GS              +++ WN  +S   Q G+A   +  F DM+ S    D 
Sbjct: 890  LFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDG 935

Query: 478  VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            ++ + +L+  +    +E G Q  + +  +  L         ++++  ++G    A  +  
Sbjct: 936  LTFVVMLTVVAGLNCLELGKQ-IHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFG 994

Query: 538  QMPFEPDEIMWSSVINSCRI 557
            QM  E D I W+++I+ C +
Sbjct: 995  QMN-EVDLISWNTMISGCTL 1013



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 35/325 (10%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            N +   T+ ++  Y+K G + +AR +F+ +     V+WT +I G  +  Q   A   +  
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQ 1229

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR      PD  TFATL+  CS      +  Q+HA+I+K        +  SLVD Y K  
Sbjct: 1230 MRL-SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCG 1288

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             ++ AR +FK    +   S+NA+I G A+ G  +EA++ F  M+  G  P   TF   LS
Sbjct: 1289 NIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLS 1348

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A                        +  V+ A  + YS        +K +G  PE++   
Sbjct: 1349 A---------------------CSHSGLVSEAYENFYS-------MQKNYGIEPEIE--H 1378

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            Y+ ++   +   + +E+ K+   +    F+ S   + TLL+    ++D + G+++  + +
Sbjct: 1379 YSCLVDALSRAGRIEEAEKVISSMP---FEASASMYRTLLNACRVQVDRETGKRV-AEKL 1434

Query: 303  VTTAISEVKVANSLVDMYAKCGRFE 327
            +    S+      L ++YA   ++E
Sbjct: 1435 LALEPSDSAAYVLLSNVYAAANQWE 1459



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE- 439
           SILR +   + LSLGK+ H+ ++ SG   + F  + L+ MYAK GSL  A + F   P+ 
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 440 -RNIVSWNALISACAQNGD 457
            R++V+WNA++SA A + D
Sbjct: 721 NRDLVTWNAILSALAAHAD 739


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 424/736 (57%), Gaps = 4/736 (0%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVS-WTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
            L+  YVK G++ +AR +F++M  +  V  W +++GGY++  +F E+  LF  M  + G  
Sbjct: 349  LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMH-ELGIT 407

Query: 71   PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
            PD    + LL   +    A + +  H  ++K G+ +   +CN+L+  Y K   +D A  V
Sbjct: 408  PDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLV 467

Query: 131  FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
            F  MP +D++S+N++I+G    GLN EAI+LFV M   G +    T  + L A       
Sbjct: 468  FDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYW 527

Query: 191  ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             +GR VH + VKT  +    +ANALLD+YS         ++F  M + + VS+  MIT Y
Sbjct: 528  FVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSY 587

Query: 251  AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                 + +   L +E+         F  +++L   A    L+ G+ +H   I       +
Sbjct: 588  TRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLL 647

Query: 311  KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             VAN+L++MY  C   EEA+ +F ++++   + W  +I  Y +     E+ +LF +M   
Sbjct: 648  PVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-L 706

Query: 371  NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
                +  T   IL A A ++SL  G+++H++ +R GF+ + ++ +AL+DMY K G+L  A
Sbjct: 707  QFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVA 766

Query: 431  IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
               F  + ++N++SW  +I+    +G  +  +  FE M  SG +PD+ S  ++L AC H 
Sbjct: 767  RVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHS 826

Query: 491  GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            GL  EG ++FN+M ++YK+ PK +HY  +VD+L  +G   EA + +  MP EPD  +W S
Sbjct: 827  GLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVS 886

Query: 551  VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
            +++ CRIH++++ A+K AD++FK+E   +   YV ++NIYA A +WE+V ++K  +  RG
Sbjct: 887  LLHGCRIHRDVKLAEKVADRVFKLEP-ENTGYYVLLANIYAEAERWEAVKKLKNKIGGRG 945

Query: 611  VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            +R+ T  SW+E++ KVHVF A++  HP+ N I   ++++ + M++EG+ P    +L   +
Sbjct: 946  LRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGAN 1005

Query: 671  EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            + +  E+L  HS +LA+ F +++ PEG PI V KN + C+ CH A K ISK+  REI +R
Sbjct: 1006 DAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILR 1065

Query: 731  DSSRFHHFKDGFCSCR 746
            DSSRFHHF+ G CSCR
Sbjct: 1066 DSSRFHHFEGGRCSCR 1081



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 162/565 (28%), Positives = 272/565 (48%), Gaps = 26/565 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y + G +  A ++F+SM  R A+SW   I GY        A  LF  M ++ G+
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSE-GT 295

Query: 70  DPDYVTFATLLSGCSEPDTANELIQ--VHADIIKFGYNSILIICNSLVDS-------YCK 120
           +   VT  ++L  C+E     EL+   VH   +K G    L    S +D        +  
Sbjct: 296 EISSVTVLSVLPACAE--LGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMY 353

Query: 121 IRCLDL--ARRVFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           ++C D+  ARRVF  MP K +V  +N ++ G+AK    EE++ LF +M  LG  P +   
Sbjct: 354 VKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHAL 413

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +  L     L+    G   H ++VK  F     V NAL+  Y+K + +  A  +F  MP 
Sbjct: 414 SCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH 473

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D +S+N +I+    N    E+++LF  +     +       ++L   A      +GR +
Sbjct: 474 QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVV 533

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H  ++ T  I E  +AN+L+DMY+ C  +    +IF N++  + V WTAMI++Y + G  
Sbjct: 534 HGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLF 593

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           ++   L  EM    I  D     S+L   A   SL  GK +H + IR+G    +   +AL
Sbjct: 594 DKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANAL 653

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           ++MY    ++++A   F  +  ++I+SWN LI   ++N  A  +   F DM+   ++P++
Sbjct: 654 MEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNT 712

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK--KEHYAS--MVDILCRSGCFDEAE 533
           V++  +L A +    +E G +        Y LR    ++ Y S  +VD+  + G    A 
Sbjct: 713 VTMTCILPAVASISSLERGRE-----IHAYALRRGFLEDSYTSNALVDMYVKCGALLVAR 767

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIH 558
            L  ++  + + I W+ +I    +H
Sbjct: 768 VLFDRLT-KKNLISWTIMIAGYGMH 791



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 263/568 (46%), Gaps = 27/568 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVD 62
            +V    L+  Y+K G+L  AR +F+ M  R A    WT L+  Y++   F+E   LF  
Sbjct: 129 GSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQ 188

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+  G S PD    + +L   +   +  E   +H  + K G      + N+L+  Y +  
Sbjct: 189 MQCCGVS-PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCG 247

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C++ A +VF  M  +D++S+N+ I+G+   G ++ A+ LF +M   G + S  T  + L 
Sbjct: 248 CMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLP 307

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENV---------FVANALLDLYSKHDCVVEARKLFG 233
           A   L    +G+ VH + +K+  + ++          + + L+ +Y K   +  AR++F 
Sbjct: 308 ACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFD 367

Query: 234 EMPEVDGVS-YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
            MP    V  +N+++  YA   +++ESL LF ++        +   S LL  +      +
Sbjct: 368 AMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCAR 427

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
            G   H   +     ++  V N+L+  YAK    + A  +F  + H  T+ W ++IS   
Sbjct: 428 DGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCT 487

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G   EA+ LF+ M       D  T  S+L A A      +G+ +H + +++G +    
Sbjct: 488 SNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETS 547

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             +ALLDMY+         Q F+ M ++N+VSW A+I++  + G         ++MV  G
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG 607

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL------CRS 526
            +PD  ++ SVL    H    +E L+   S+   Y +R   E    + + L      CR+
Sbjct: 608 IKPDVFAVTSVL----HGFAGDESLKQGKSV-HGYAIRNGMEKLLPVANALMEMYVNCRN 662

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              +EA +L+       D I W+++I  
Sbjct: 663 --MEEA-RLVFDHVTNKDIISWNTLIGG 687



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 265/591 (44%), Gaps = 73/591 (12%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           Q      A +L   + +DGG      ++  ++  C E  +     + HA +++ G   I+
Sbjct: 75  QAGDLAAALRL---LGSDGGVGVR--SYCAVVQLCGEERSLEAARRAHA-LVRAGTGGII 128

Query: 109 --IICNSLVDSYCKIRCLDLARRVFKEMPQK--DSVSFNALITGFAKEGLNEEAIKLFVE 164
             ++   LV +Y K   L  AR VF EMP +  D   + +L++ +AK G  +E + LF +
Sbjct: 129 GSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQ 188

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           MQ  G  P     +  L     L  I  G  +H  + K    E   VANAL+ LYS+  C
Sbjct: 189 MQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGC 248

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A ++F  M   D +S+N  I+ Y  N  +  ++ LF ++     + ++    T+LSV
Sbjct: 249 MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMW---SEGTEISSVTVLSV 305

Query: 285 VANKLDLQ---IGRQIHTQTI----------VTTAISEVKVANSLVDMYAKCGRFEEAKE 331
           +    +L    +G+ +H  ++          V + I E  + + LV MY KCG    A+ 
Sbjct: 306 LPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEA-LGSKLVFMYVKCGDMGSARR 364

Query: 332 IFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +F  +     V  W  ++  Y +    EE+L LF +M    I+ D+   + +L+    L+
Sbjct: 365 VFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLS 424

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
               G   H ++++ GF +     +AL+  YAKS  + +A+  F  MP ++ +SWN++IS
Sbjct: 425 CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVIS 484

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGL-- 497
            C  NG     ++ F  M   G++ DS +LLSVL AC+           H   ++ GL  
Sbjct: 485 GCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG 544

Query: 498 ----------------------QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
                                 Q F +M QK  +      + +M+    R+G FD+   L
Sbjct: 545 ETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS-----WTAMITSYTRAGLFDKVAGL 599

Query: 536 MAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFK--MEKLRDAA 581
           + +M  +   PD    +SV++     ++L+  K       +  MEKL   A
Sbjct: 600 LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 164/332 (49%), Gaps = 3/332 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L+  Y    +  +  ++F +M  +  VSWT +I  Y++   F +   L  +M  
Sbjct: 546 TSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVL 605

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D G  PD     ++L G +  ++  +   VH   I+ G   +L + N+L++ Y   R ++
Sbjct: 606 D-GIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNME 664

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR VF  +  KD +S+N LI G+++     E+  LF +M  L FKP+  T    L A  
Sbjct: 665 EARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVA 723

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            ++ +  GR++HA+ ++  F+E+ + +NAL+D+Y K   ++ AR LF  + + + +S+ +
Sbjct: 724 SISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 783

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  +   K+++ LF +++ +  +     FS +L    +      G +         
Sbjct: 784 MIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEY 843

Query: 306 AI-SEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            I  ++K    +VD+ +  G  +EA E   ++
Sbjct: 844 KIEPKLKHYTCIVDLLSHTGNLKEAFEFIESM 875



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +++ ++N L+  YVK G L  AR LF+ +  +  +SWTI+I GY      ++A  LF  M
Sbjct: 745 EDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQM 804

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE 91
           R   G +PD  +F+ +L  C       E
Sbjct: 805 RGS-GVEPDTASFSAILYACCHSGLTAE 831


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/740 (36%), Positives = 438/740 (59%), Gaps = 2/740 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N+L++ Y K G   +A  +F+ + +R  VS+  L+ G++ + +F EA  LF  +R +G  
Sbjct: 469  NVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHE 528

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
               +V   T+L      DT      VHA   K G++    + ++L+D+Y     +  ARR
Sbjct: 529  VNQFV-LTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARR 587

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF  +  KD+V++ A+++ +++    E  +++F +M+    K + F   + L A V L+ 
Sbjct: 588  VFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSS 647

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + LG+ +HA  VKT +     V  ALLD+Y+K   + +AR  F  +   D + +++MI+ 
Sbjct: 648  VVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISR 707

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            YA   Q +++ +LF  +  +    ++F  S++L   AN   L +G+QIH   I     SE
Sbjct: 708  YAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESE 767

Query: 310  VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            + V N+L+D+YAKC   E + EIF++L  ++ V W  +I  Y + G  E AL++F EM  
Sbjct: 768  LFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRA 827

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            A++ + Q T++S+LRA A  AS++   Q+H  + +S F S+    ++L+D YAK G ++D
Sbjct: 828  ASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRD 887

Query: 430  AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            A + F+ + E ++VSWNA+IS  A +G A    + F+ M ++  + + ++ +++LS C  
Sbjct: 888  AREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947

Query: 490  CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             GL+ +GL  F+SM   + + P  EHY  +V +L R+G  ++A   +  +P  P  ++W 
Sbjct: 948  TGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWR 1007

Query: 550  SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            ++++SC +HKN+E  + +A+++ ++E  +D   YV +SN+Y+ AG  + V+  +K+MR  
Sbjct: 1008 ALLSSCIVHKNVELGRFSAEKVLEIEP-QDETTYVLLSNMYSAAGSLDQVAFFRKSMRNI 1066

Query: 610  GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            GVRK    SWVE+K +VH F+   E HP    I   +E L  +  +EGY PDT   LHD 
Sbjct: 1067 GVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDL 1126

Query: 670  DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            +EE KV  L  HSERLA+A+ L+ TP G PI +MKNLR+C DCHA  K+ISKI  +EI V
Sbjct: 1127 EEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIV 1186

Query: 730  RDSSRFHHFKDGFCSCRDFW 749
            RD +RFHHF++G CSC D+W
Sbjct: 1187 RDINRFHHFEEGTCSCGDYW 1206



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 269/525 (51%), Gaps = 4/525 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL-IIC-NSLVDSYCKIRCLDLARR 129
           D   +A LL GC     A     VH  +++ G  + L + C N L++ Y K+     A R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +P+++ VSF  L+ G A  G  EEA  LF  ++  G + + F     L   V +  
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + L   VHA   K     N FV +AL+D YS    V +AR++F  +   D V++  M++C
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y+ N+  + +L++F +++      + F  +++L        + +G+ IH  ++ T   +E
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V  +L+DMYAKCG  E+A+  F  +++   + W+ MIS Y Q    E+A  LFI M R
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMR 726

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +++S ++ + +S+L+A A +  L LGKQ+H+  I+ G  S +F G+AL+D+YAK   ++ 
Sbjct: 727 SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMES 786

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           +++ F  + + N VSWN +I   +++G  +A L  F +M  +      V+  SVL AC+ 
Sbjct: 787 SLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACAS 846

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I    Q  + + +K           S++D   + GC  +A ++   +  E D + W+
Sbjct: 847 TASINHVGQ-VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK-ECDLVSWN 904

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++I+   +H     A++  D + K     +   +VA+ ++    G
Sbjct: 905 AIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 243/482 (50%), Gaps = 5/482 (1%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++N    + LI  Y   G ++ AR +F+ +V + AV+WT ++  YS+ +      ++F  
Sbjct: 563  DRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSK 622

Query: 63   MRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            MR      +P  +T     + C       +   +HA  +K  Y++   +  +L+D Y K 
Sbjct: 623  MRVAVSKLNPFALTSVLRAAVCLSSVVLGK--GIHACSVKTLYDTERHVYGALLDMYAKC 680

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
              ++ AR  F+ +   D + ++ +I+ +A+   NE+A +LF+ M      P++F+ ++ L
Sbjct: 681  GNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVL 740

Query: 182  SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             A   +  + LG+Q+H   +K      +FV NAL+DLY+K   +  + ++F  + +V+ V
Sbjct: 741  QACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEV 800

Query: 242  SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            S+N +I  Y+ +   + +L +FRE++      +Q  +S++L   A+   +    Q+H   
Sbjct: 801  SWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLI 860

Query: 302  IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
              +T  S+  V+NSL+D YAKCG   +A+EIF  L     V W A+IS Y   G    A 
Sbjct: 861  EKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQ 920

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDM 420
             LF  M + +I A+  TF ++L        +S G  L  S  +  G   ++   + ++ +
Sbjct: 921  ELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRL 980

Query: 421  YAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
              ++G L DA+    ++P   + + W AL+S+C  + + +    S E +++   Q ++  
Sbjct: 981  LGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTY 1040

Query: 480  LL 481
            +L
Sbjct: 1041 VL 1042


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/713 (37%), Positives = 417/713 (58%), Gaps = 3/713 (0%)

Query: 38   VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHA 97
            ++W   +  + Q+ +  EA   FVDM  +     D +TF  +LS  +  +      Q+H 
Sbjct: 872  IAWNKTLSWFLQRGETWEAVDCFVDM-INSRVACDGLTFVVMLSVVAGLNCLELGKQIHG 930

Query: 98   DIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
             +++ G + ++ + N L++ Y K   +  AR VF +M + D VS+N +I+G A  GL E 
Sbjct: 931  IVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEEC 990

Query: 158  AIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALL 216
            ++ +FV++   G  P  FT A+ L A   L     L  Q+HA  +K   V + FV+  L+
Sbjct: 991  SVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLI 1050

Query: 217  DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
            D+YSK   + EA  LF      D  S+N M+  Y  +  + ++L+L+  +Q +    +Q 
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQI 1110

Query: 277  PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
              +         + L+ G+QI    +      ++ V + ++DMY KCG  E A+ IF  +
Sbjct: 1111 TLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170

Query: 337  SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                 V WT MIS  V+ G  E AL  +  M  + +  D+ TFA++++A + L +L  G+
Sbjct: 1171 PSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGR 1230

Query: 397  QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            Q+H+  ++     + F  ++L+DMYAK G+++DA   FK      I SWNA+I   AQ+G
Sbjct: 1231 QIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHG 1290

Query: 457  DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            +A+  L+ FE+M   G  PD V+ + VLSACSH GL+ E  + F SM + Y + P+ EHY
Sbjct: 1291 NAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHY 1350

Query: 517  ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            + +VD L R+G   EAEK+++ MPFE    M+ +++N+CR+  + E  K+ A++L  +E 
Sbjct: 1351 SCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEP 1410

Query: 577  LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
              D+A YV +SN+YA A QWE+V+  +  MR+  V+K   +SWV+LK+KVH+F A D  H
Sbjct: 1411 -SDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSH 1469

Query: 637  PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
             +T+ I  K+E +M+ +++EGY PDT  AL D +EE K  SL YHSE+LAIA+ L+ TP 
Sbjct: 1470 EETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPP 1529

Query: 697  GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             + + V+KNLR C DCH AIK ISK+  RE+ +RD++RFHHF+ G CSC D+W
Sbjct: 1530 STTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 227/446 (50%), Gaps = 4/446 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LI+ YVK+G+++ AR +F  M +   VSW  +I G +       +  +FVD+   GG 
Sbjct: 945  NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDL-LRGGL 1003

Query: 70   DPDYVTFATLLSGCSEPDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T A++L  CS       L  Q+HA  +K G      +  +L+D Y K   ++ A 
Sbjct: 1004 LPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAE 1063

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             +F      D  S+NA++ G+   G   +A++L++ MQ  G + +  T A A  A  GL 
Sbjct: 1064 FLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLV 1123

Query: 189  DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             +  G+Q+ A VVK  F  ++FV + +LD+Y K   +  AR++F E+P  D V++  MI+
Sbjct: 1124 GLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMIS 1183

Query: 249  CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                N Q + +L  +  ++ ++    ++ F+TL+   +    L+ GRQIH  T+      
Sbjct: 1184 GCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAF 1243

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +  V  SLVDMYAKCG  E+A+ +F   +      W AMI    Q GN EEAL  F EM 
Sbjct: 1244 DPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMK 1303

Query: 369  RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               ++ D+ TF  +L A +    +S   +  +S     G    +   S L+D  +++G +
Sbjct: 1304 SRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRI 1363

Query: 428  KDAIQTFKEMP-ERNIVSWNALISAC 452
            ++A +    MP E +   +  L++AC
Sbjct: 1364 REAEKVISSMPFEASASMYRTLLNAC 1389



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 262/556 (47%), Gaps = 43/556 (7%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
            TN LI+ Y K G+L++AR+LF++  D  R  V+W  ++  ++ K   R+ F LF  +R  
Sbjct: 664  TNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA--RDGFHLFRLLRRS 721

Query: 67   GGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              S   + T A +   C   + P  A  L   H   +K G    + +  +LV+ Y K   
Sbjct: 722  FVSATRH-TLAPVFKMCLLSASPSAAESL---HGYAVKIGLQWDVFVAGALVNIYAKFGR 777

Query: 124  LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            +  AR +F  M  +D V +N ++  +   GL  EA+ LF E    G +P D T       
Sbjct: 778  IREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCT---- 833

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG--- 240
                    L R V +   K N +E           +          KLF    + DG   
Sbjct: 834  --------LARVVKS---KQNVLE-----------WQLKQLKAYGTKLFMYDDDDDGSDV 871

Query: 241  VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            +++N  ++ +    +  E++  F ++  +R       F  +LSVVA    L++G+QIH  
Sbjct: 872  IAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGI 931

Query: 301  TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             + +     V V N L++MY K G    A+ +F  ++ +  V W  MIS     G  E +
Sbjct: 932  VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991

Query: 361  LNLFIEMCRANISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            + +F+++ R  +  DQ T AS+LRA + L     L  Q+H+  +++G + + F  + L+D
Sbjct: 992  VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051

Query: 420  MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            +Y+KSG +++A   F      ++ SWNA++     +GD    L+ +  M +SG + + ++
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQIT 1111

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L +   A      +++G Q   ++  K          + ++D+  + G  + A ++  ++
Sbjct: 1112 LANAAKAAGGLVGLKQGKQ-IQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170

Query: 540  PFEPDEIMWSSVINSC 555
            P  PD++ W+++I+ C
Sbjct: 1171 P-SPDDVAWTTMISGC 1185



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 238/514 (46%), Gaps = 33/514 (6%)

Query: 94   QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ--KDSVSFNALITGFAK 151
            + HA I+  G++    + N+L+  Y K   L  AR++F   P   +D V++NA+++  A 
Sbjct: 647  RAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHAD 706

Query: 152  EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            +    +   LF  ++      +  T A      +  A  +    +H + VK     +VFV
Sbjct: 707  KA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFV 764

Query: 212  ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            A AL+++Y+K   + EAR LF  M   D V +NVM+  Y       E+L LF E   T  
Sbjct: 765  AGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGL 824

Query: 272  DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                    TL  VV +K           Q ++   + ++K   + + MY       +   
Sbjct: 825  RPDDVTLCTLARVVKSK-----------QNVLEWQLKQLKAYGTKLFMYDDDDDGSD--- 870

Query: 332  IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
                      + W   +S ++Q+G   EA++ F++M  + ++ D  TF  +L   A L  
Sbjct: 871  ---------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNC 921

Query: 392  LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
            L LGKQ+H  V+RSG    V  G+ L++MY K+GS+  A   F +M E ++VSWN +IS 
Sbjct: 922  LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981

Query: 452  CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            CA +G  + ++  F D+++ G  PD  ++ SVL ACS  G         ++   K  +  
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 512  KKEHYASMVDILCRSGCFDEAEKLMA-QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
                  +++D+  +SG  +EAE L   Q  F  D   W+++++   +  +     KA   
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF--DLASWNAMMHGYIVSGDF---PKALRL 1096

Query: 571  LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
               M++  + A  + ++N    AG    + Q K+
Sbjct: 1097 YILMQESGERANQITLANAAKAAGGLVGLKQGKQ 1130



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 170/382 (44%), Gaps = 35/382 (9%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-- 238
           L   +  +D+ LG++ HA ++ +    + F+ N L+ +YSK   +  ARKLF   P+   
Sbjct: 633 LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSR 692

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D V++N +++ +A  ++ ++   LFR L+ +    ++   + +  +            +H
Sbjct: 693 DLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLH 750

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +      +V VA +LV++YAK GR  EA+ +F  +     V W  M+ AYV  G   
Sbjct: 751 GYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEY 810

Query: 359 EALNLFIEMCRANISADQA---TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           EAL LF E  R  +  D     T A ++++   +    L KQL ++            G+
Sbjct: 811 EALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQL-KQLKAY------------GT 857

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            L  MY       D            +++WN  +S   Q G+    +  F DM+ S    
Sbjct: 858 KLF-MYDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D ++ + +LS  +    +E G Q  + +  +  L         ++++  ++G    A  +
Sbjct: 905 DGLTFVVMLSVVAGLNCLELGKQ-IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTV 963

Query: 536 MAQMPFEPDEIMWSSVINSCRI 557
             QM  E D + W+++I+ C +
Sbjct: 964 FWQMN-EVDLVSWNTMISGCAL 984



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE- 439
           SILR +   + L LGK+ H+ ++ SG   + F  + L+ MY+K GSL  A + F   P+ 
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 440 -RNIVSWNALISACA 453
            R++V+WNA++SA A
Sbjct: 691 SRDLVTWNAILSAHA 705


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 395/648 (60%), Gaps = 14/648 (2%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+++Y K   + LAR+VF E+PQ D VS+N LI  +A  G    A++LF E++ L F 
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
              FT +  + A     D+ L RQ+H FVV   +     V NA+L  YS+   + EAR++
Sbjct: 139 LDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196

Query: 232 FGEMPEVDG---VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           F EM E  G   VS+N MI     + +  E+++LFRE+         F  +++L+     
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAM 347
            DL  G Q H   I +       V + L+D+Y+KC G   E +++F  ++    V W  M
Sbjct: 257 KDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTM 316

Query: 348 ISAYVQKGNL-EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           IS + Q  +L E+ +  F EM       D  +F  +  A + L+S S+GKQ+H+  I+S 
Sbjct: 317 ISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSD 376

Query: 407 FMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
              N  S  +AL+ MY+K G++ DA + F  MPE N+VS N++I+  AQ+G    +L+ F
Sbjct: 377 IPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLF 436

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M+Q    P++++ ++VLSAC H G +EEG +YFN M +++++ P+ EHY+ M+D+L R
Sbjct: 437 ELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGR 496

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EAE+++  MPF P  I W++++ +CR H N+E A KAA++  ++E   +AAPYV 
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPY-NAAPYVM 555

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+YA A +WE  + VK+ MRERGV+K    SW+E+  KVHVF A D  HP   EI   
Sbjct: 556 LSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVY 615

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEI----KVESLKYHSERLAIAFALINTPEGSPIL 701
           +  ++++MK+ GY PD   AL  +DEE+    K   L YHSE+LA+AF LI+T E  PIL
Sbjct: 616 MGEILRKMKQAGYVPDIRWAL-VKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPIL 674

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V+KNLR C DCH AIKLIS ITGREITVRD+ RFH FK+G CSC D+W
Sbjct: 675 VVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 245/476 (51%), Gaps = 15/476 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N LI+ Y K   +  AR++F+ +     VS+  LI  Y+ + + R A +LF ++R
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +     D  T + ++  C   D    + Q+H  ++  GY+    + N+++  Y +   L
Sbjct: 134 -ELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190

Query: 125 DLARRVFKEMPQ---KDSVSFNALIT--GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           + ARRVF+EM +   +D VS+NA+I   G  +EGL  EA++LF EM   G K   FT A+
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGL--EAVELFREMVRRGLKVDMFTMAS 248

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEV 238
            L+A   + D+  G Q H  ++K+ F  N  V + L+DLYSK    +VE RK+F E+   
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 239 DGVSYNVMITCYAWNEQYKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           D V +N MI+ ++  E   E  +  FRE+Q   F      F  + S  +N     +G+Q+
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 298 HTQTIVT-TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           H   I +    + V V N+LV MY+KCG   +A+ +F  +   + V   +MI+ Y Q G 
Sbjct: 369 HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGV 428

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGS 415
             E+L LF  M + +I+ +  TF ++L A      +  G++  + +  R          S
Sbjct: 429 EVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYS 488

Query: 416 ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            ++D+  ++G LK+A +  + MP     + W  L+ AC ++G+ +  +K+  + +Q
Sbjct: 489 CMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQ 544



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 211/446 (47%), Gaps = 56/446 (12%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NVF  N L++ Y+KH  +  AR++F E+P+ D VSYN +I  YA   + + +L+LF E++
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
             RF    F  S +  ++A   D+ + RQ+H   +V        V N+++  Y++ G   
Sbjct: 134 ELRFGLDGFTLSGV--IIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 328 EAKEIFANLSHIST---VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           EA+ +F  +        V W AMI A  Q     EA+ LF EM R  +  D  T AS+L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK-SGSLKDAIQTFKEMPERNIV 443
           A   +  L  G Q H  +I+SGF  N   GS L+D+Y+K +G + +  + F+E+   ++V
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLV 311

Query: 444 SWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSH------------- 489
            WN +IS  +Q  D ++  +  F +M  +G+ PD  S + V SACS+             
Sbjct: 312 LWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHAL 371

Query: 490 -----------------------CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
                                  CG + +  + F++M +   +        SM+    + 
Sbjct: 372 AIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVS-----LNSMIAGYAQH 426

Query: 527 GCFDEAEK---LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL---FKMEKLRDA 580
           G   E+ +   LM Q    P+ I + +V+++C     +E  +K  + +   F++E   +A
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP--EA 484

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAM 606
             Y  M ++   AG+ +   ++ + M
Sbjct: 485 EHYSCMIDLLGRAGKLKEAERIIETM 510



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P       N L++ Y K GN+  AR +F++M +   VS   +I GY+Q     E+ +LF
Sbjct: 377 IPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLF 436

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
            ++       P+ +TF  +LS C       E  Q + +++K  F         + ++D  
Sbjct: 437 -ELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAEHYSCMIDLL 494

Query: 119 CKIRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIK 160
            +   L  A R+ + MP    S+ +  L+    K G  E A+K
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVK 537



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 54/224 (24%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TF ++L+A      L  GK LH+   +S    + +  +    +Y+K GSL +A  +F   
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 438 PERNIVSWNALISACAQN-------------------------------GDAQATLKSFE 466
              N+ S+N LI+A A++                               G+ +  L+ F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 467 DMVQSGYQPDSVSLLSVLSACS---------HCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           ++ +  +  D  +L  V+ AC          HC ++  G   + S+              
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNN------------ 178

Query: 518 SMVDILCRSGCFDEAEKLMAQM--PFEPDEIMWSSVINSCRIHK 559
           +++    R G  +EA ++  +M      DE+ W+++I +C  H+
Sbjct: 179 AVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHR 222


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 262/704 (37%), Positives = 405/704 (57%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++ ++ K   LD ARRVF E+PQ DSVS+  +I G+   GL + A+  F+ M   G  
Sbjct: 83  NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ FTF   L++      + +G++VH+FVVK      V VAN+LL++Y+K    V A+ +
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-------------------------- 265
           F  M   D  ++N MI+ +    Q+  +L LF +                          
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262

Query: 266 ------LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
                 L+ +     +F   ++LS  AN+  L++G+QIH   +         V N+L+ M
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISM 322

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                  A+ IF +L H   V WTA
Sbjct: 323 YAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTA 382

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G + +AL LF  M R     +  T A++L   + LASL  GKQLH+  IR  
Sbjct: 383 MIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLE 442

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSF 465
            +S+V  G+AL+ MY++SGS+KDA + F  +   R+ ++W ++I + AQ+G     ++ F
Sbjct: 443 EVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELF 502

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M++   +PD ++ + VLSAC+H GL+E+G  YFN M   + + P   HYA M+D+L R
Sbjct: 503 EKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGR 562

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  +EA   +  MP EPD + W S+++SCR+HK ++ AK AA++L  ++   ++  Y+A
Sbjct: 563 AGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDP-NNSGAYLA 621

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N  +  G+WE  ++V+K+M+++ V+K   +SWV++K+KVH+F   D LHPQ + I   
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCM 681

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           I  + +E+KK G+ PDT+  LHD ++E+K + L++HSE+LAIAFALINTP+ + + +MKN
Sbjct: 682 ISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKN 741

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH+AI+ IS +  REI VRD++RFHHFKDG CSC+D+W
Sbjct: 742 LRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 283/630 (44%), Gaps = 106/630 (16%)

Query: 9   TNMLISGYVKS-------------------------------GNLATARELFNSMVDRTA 37
           TN L++ YVK+                               GNL +AR +F+ +    +
Sbjct: 51  TNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDS 110

Query: 38  VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHA 97
           VSWT +I GY+    F+ A   F+ M + G S P   TF  +L+ C+     +   +VH+
Sbjct: 111 VSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS-PTQFTFTNVLASCAAAQALDVGKKVHS 169

Query: 98  DIIKFGYNSILIICNSLVDSYCK-------------IRC------------------LDL 126
            ++K G + ++ + NSL++ Y K             +R                    DL
Sbjct: 170 FVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDL 229

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGV 185
           A  +F +M   D VS+N++ITG+  +G +  A++ F  M +    KP  FT  + LSA  
Sbjct: 230 ALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACA 289

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV------VE------------ 227
               + LG+Q+HA +V+ +      V NAL+ +Y+K   V      VE            
Sbjct: 290 NRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAF 349

Query: 228 ---------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
                          AR +F  +   D V++  MI  YA N    ++L LFR +      
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            + +  + +LSV+++   L  G+Q+H   I    +S V V N+L+ MY++ G  ++A++I
Sbjct: 410 PNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKI 469

Query: 333 FANL-SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           F ++ S+  T+ WT+MI +  Q G   EA+ LF +M R N+  D  T+  +L A   +  
Sbjct: 470 FNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGL 529

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALI 449
           +  GK   + +     +    S  A ++D+  ++G L++A    + MP E ++V+W +L+
Sbjct: 530 VEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQP-DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           S+C  +        + E ++     P +S + L++ +  S CG  E+  +   SM  K  
Sbjct: 590 SSCRVHKYVDLAKVAAEKLLL--IDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDK-- 645

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
              KKE   S V I  +   F   + L  Q
Sbjct: 646 -AVKKEQGFSWVQIKNKVHIFGVEDALHPQ 674



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 197/446 (44%), Gaps = 66/446 (14%)

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
           ++  F  N +L  ++K   +  AR++F E+P+ D VS+  MI  Y     +K ++  F  
Sbjct: 76  LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +  +    +QF F+ +L+  A    L +G+++H+  +       V VANSL++MYAKCG 
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGD 195

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA----------- 374
              AK +F  +    T  W  MIS ++Q    + AL LF +M   +I +           
Sbjct: 196 SVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQ 255

Query: 375 ---------------------DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
                                D+ T  S+L A A   SL LGKQ+H+ ++R+        
Sbjct: 256 GYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAV 315

Query: 414 GSALLDMYAKSGSLK---------------------------------DAIQTFKEMPER 440
           G+AL+ MYAKSG+++                                  A   F  +  R
Sbjct: 316 GNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHR 375

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++V+W A+I   AQNG     L  F  M++ G +P++ +L +VLS  S    ++ G Q  
Sbjct: 376 DVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ-L 434

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
           +++  + +         +++ +  RSG   +A K+   +    D + W+S+I S   H  
Sbjct: 435 HAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGL 494

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAM 586
              A +  +++ ++    D   YV +
Sbjct: 495 GNEAIELFEKMLRINLKPDHITYVGV 520



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 177/386 (45%), Gaps = 42/386 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++T + N +IS +++      A  LF+ M D   VSW  +I GY  +     A + F  M
Sbjct: 209 KDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFM 268

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK---------------------- 101
                  PD  T  ++LS C+  ++     Q+HA I++                      
Sbjct: 269 LKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGA 328

Query: 102 ----------FGYNSILIIC-NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
                      G  S+ +I   SL+D Y KI  +D AR +F  +  +D V++ A+I G+A
Sbjct: 329 VEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYA 388

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + GL  +A+ LF  M   G KP+++T AA LS    LA +  G+Q+HA  ++   V +V 
Sbjct: 389 QNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVS 448

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           V NAL+ +YS+   + +ARK+F  +    D +++  MI   A +    E+++LF ++   
Sbjct: 449 VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRI 508

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS----LVDMYAKCGR 325
                   +  +LS   +   ++ G+       +   +  ++  +S    ++D+  + G 
Sbjct: 509 NLKPDHITYVGVLSACTHVGLVEQGKSYFN---LMKNVHNIEPTSSHYACMIDLLGRAGL 565

Query: 326 FEEAKEIFANLS-HISTVPWTAMISA 350
            EEA     N+      V W +++S+
Sbjct: 566 LEEAYNFIRNMPIEPDVVAWGSLLSS 591



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 76/382 (19%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKV--ANSLVDMY------------------ 320
           LL       D  IGR IH + I+   +  + V   N+L+++Y                  
Sbjct: 18  LLQSAIKSRDPFIGRCIHAR-IIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPL 76

Query: 321 -------------AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
                        AK G  + A+ +F  +    +V WT MI  Y   G  + A++ F+ M
Sbjct: 77  KTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM 136

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS- 426
             + IS  Q TF ++L + A   +L +GK++HSFV++ G    V   ++LL+MYAK G  
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDS 196

Query: 427 -----------LKD-------------------AIQTFKEMPERNIVSWNALISA-CAQN 455
                      LKD                   A+  F +M + +IVSWN++I+  C Q 
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG 256

Query: 456 GDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
            D +A L++F  M++ S  +PD  +L SVLSAC++   ++ G Q  ++   +  +     
Sbjct: 257 YDIRA-LETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQ-IHAHIVRADVDIAGA 314

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEP--DEIMWSSVINSCRIHKNLEFAKKAADQLF 572
              +++ +  +SG  + A +++ ++   P  + I ++S+++      +++ A+   D L 
Sbjct: 315 VGNALISMYAKSGAVEVAHRIV-EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSL- 372

Query: 573 KMEKLRDAAPYVAMSNIYAVAG 594
              K RD   + AM   YA  G
Sbjct: 373 ---KHRDVVAWTAMIVGYAQNG 391


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/740 (37%), Positives = 422/740 (57%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K+ +    R +F+ M  +  VSWT L+ GY++     E   L   M+ +G  +P
Sbjct: 145 LVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEG-VNP 203

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFAT+L   ++       +QVHA I+K G+     +CN+L+  Y K   +  A  VF
Sbjct: 204 NGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVF 263

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +DSV++N +I G+A  G   E  ++F  M+  G K S   F  AL       ++ 
Sbjct: 264 DSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELN 323

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
             +Q+H  VVK  +     +  AL+  YSK   V EA KLF        V ++  MI  +
Sbjct: 324 FTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGF 383

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N   K+++ LF ++       + F +ST+L+   + L      Q+H Q I        
Sbjct: 384 VQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQLHAQIIKAYYEKVP 439

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            VA +L+D Y K G   E+  +F ++     V W+AM++   Q  + E+A+ +FI++ + 
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 371 NISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ TF+S++ A S+  A++  GKQ+H+  ++SG  + +   SALL MY+K G+++ 
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F    ER+IVSWN++I+   Q+GDA+  L+ F+ M   G   D V+ + VL+AC+H
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YFN M + Y +  K EHY+ MVD+  R+G FD+A  ++  MPF     +W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+H+NLE  K AA++L  ++   DA  YV +SNI+AVAG WE  + V+K M ER
Sbjct: 680 TLLAACRVHRNLELGKLAAEKLVSLQP-NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+E+K+++  F A D  HP ++ +  K+E L  ++K  GY+PDT+   HD 
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K   L  HSERLAIA+ LI  P G+PI + KNLR C DCH  I+LIS I  R + V
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHFK G CSC  +W
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 166/546 (30%), Positives = 282/546 (51%), Gaps = 14/546 (2%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A +LF+    +    +  L+  +S+ N  REA  LF D+ + G    D +T +  L  C 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG-LGVDGLTLSCALKVCG 115

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                    QVH   +K G+   + +  SLVD Y K    +  R +F EM  K+ VS+ +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           L++G+A+ GLN+E I L  +MQ  G  P+ FTFA  L A    + I  G QVHA +VK  
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F    FV NAL+ +Y K + V +A  +F  M   D V++N+MI  YA    Y E  ++F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            ++      S+  F T L + + + +L   +Q+H   +         +  +L+  Y+KC 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 325 RFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
             +EA ++F  A+ +H + V WTAMI  +VQ  N ++A++LF +M R  +  +  T++++
Sbjct: 356 SVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L         SL  QLH+ +I++ +       +ALLD Y K+G++ ++ + F  +P ++I
Sbjct: 415 LAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFN 501
           V+W+A+++  AQ  D++  ++ F  +V+ G +P+  +  SV++AC S    +E G Q   
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           +  +  K        A ++ +  + G  + AEK+  +   E D + W+S+I     H + 
Sbjct: 531 TAVKSGKSNALCVSSA-LLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGD- 587

Query: 562 EFAKKA 567
             AKKA
Sbjct: 588 --AKKA 591



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 233/451 (51%), Gaps = 9/451 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI  Y+KS  +  A  +F+SMV R +V+W I+IGGY+    + E F++F  MR 
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G       F T L  CS+    N   Q+H  ++K GY     I  +L+ +Y K   +D
Sbjct: 300 -AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 126 LARRVFKEM-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            A ++F       + V++ A+I GF +   N++A+ LF +M   G +P+ FT++  L+  
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAG- 417

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                 +L  Q+HA ++K  + +   VA ALLD Y K   VVE+ ++F  +P  D V+++
Sbjct: 418 ---KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHTQTIV 303
            M+T  A     ++++++F +L       +++ FS++++  ++    ++ G+QIH   + 
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +   + + V+++L+ MY+K G  E A+++F        V W +MI+ Y Q G+ ++AL +
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEV 594

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYA 422
           F  M    +  D  TF  +L A      +  G++  + +I+   +       S ++D+Y+
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS 654

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++G    A+     MP   +   W  L++AC
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAAC 685



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 214/448 (47%), Gaps = 7/448 (1%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A ++F E P KD   +N L+  F++   + EA+ LF ++   G      T + AL     
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  +GRQVH   +K+ F+E+V V  +L+D+Y K +   + R +F EM   + VS+  +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           ++ YA N    E + L  ++Q    + + F F+T+L  +A++  ++ G Q+H   +    
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                V N+L+ MY K     +A+ +F ++    +V W  MI  Y   G   E   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  A +   +  F + L+  ++   L+  KQLH  V+++G+       +AL+  Y+K  S
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 427 LKDAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + +A + F       N+V+W A+I    QN + +  +  F  M + G +P+  +  +VL+
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
                 L +   Q   +  +K    P      +++D   ++G   E+ ++   +P   D 
Sbjct: 417 GKPSSLLSQLHAQIIKAYYEKV---PSVA--TALLDAYVKTGNVVESARVFYSIP-AKDI 470

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFK 573
           + WS+++      ++ E A +   QL K
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVK 498


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 286/790 (36%), Positives = 429/790 (54%), Gaps = 122/790 (15%)

Query: 76  FATLLSGC--SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           + +LL  C    P + +    VHA +I  G+     I N L+D Y K   L+ AR +F E
Sbjct: 14  YGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDE 73

Query: 134 MPQ---------------------------------KDSVSFNALITGFAKEGLNEEAIK 160
           +PQ                                 +DSV +NA+IT ++       AI+
Sbjct: 74  IPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIE 133

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALG----RQVHAFVVK--TNFVENVFVANA 214
           LF +MQ   F+P ++TF + L A   LA +A      +Q+H  VVK  T FV +V   NA
Sbjct: 134 LFCDMQRDNFRPDNYTFTSVLGA---LALVAEKEKHCQQLHCAVVKSGTGFVTSVL--NA 188

Query: 215 LLDLYSK---------HDCVVEARKLFGEMPEVD-------------------------- 239
           L+  Y K            + EARKLF EMP  D                          
Sbjct: 189 LISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNG 248

Query: 240 -----GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
                GV++N MI+ YA    Y E+ ++FR++  ++    +F F++++SV AN    ++G
Sbjct: 249 TSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLG 308

Query: 295 RQIHTQTIVTTAISEVKVA----NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           +++H   + T A     VA    N+L+  Y KCG+ + A+EIF  +     V W  ++S 
Sbjct: 309 KEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSG 368

Query: 351 YVQKGNLEEALNLFIEMCRANIS--------------ADQA-----------------TF 379
           YV    ++EA + F EM   NI               A++A                  F
Sbjct: 369 YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAF 428

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           A  + + + L SL  G+QLH+ V+R G+ S++ +G+AL+ MYA+ G +  A   F  MP 
Sbjct: 429 AGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC 488

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            + +SWNA+I+A  Q+G     ++ FE+M++ G  PD +S L+V+SACSH GL++EG +Y
Sbjct: 489 VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKY 548

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F+SM   Y + P +EHYA ++D+LCR+G F EA+++M  MPFEP   +W +++  CRIH 
Sbjct: 549 FDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N++   +AA++LF+++   D   YV +SN+YAVAGQW  +++V+K MR+RGV+K    SW
Sbjct: 609 NIDLGIEAAERLFELKPQHDGT-YVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSW 667

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           +E+++KVH F   D  HP+  +I   +E L+ EM+K GY PDT C LHD + ++K   L 
Sbjct: 668 IEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELS 727

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
            HSE+LA+A+  +  P G+ + V KNLR C DCH A K +SK+ GREI VRD  RFHHF+
Sbjct: 728 THSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFR 787

Query: 740 DGFCSCRDFW 749
           DG CSC D+W
Sbjct: 788 DGKCSCGDYW 797



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 257/567 (45%), Gaps = 93/567 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFK 58
           +P  + V+   LI+ Y  +G+L  +R++F+   +  R +V +  +I  YS  +    A +
Sbjct: 74  IPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIE 133

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           LF DM+ D    PD  TF ++L   +   +      Q+H  ++K G   +  + N+L+ S
Sbjct: 134 LFCDMQRDN-FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISS 192

Query: 118 YCKIR---------CLDLARRVFKEMPQKD------------------------------ 138
           Y K            +  AR++F EMP +D                              
Sbjct: 193 YVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKK 252

Query: 139 -SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
             V++NA+I+G+A  GL  EA ++F +M     +  +FTF + +S         LG+++H
Sbjct: 253 LGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMH 312

Query: 198 AFVVKT--NFVENVF--VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA-- 251
           A+ +KT  N   +V   V NAL+  Y K   V  A+++F +MPE D VS+N++++ Y   
Sbjct: 313 AYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNV 372

Query: 252 ---------WNEQ--------------------YKESLKLFRELQFTRFDRSQFPFSTLL 282
                    +NE                      +E+LK F  ++   F+   + F+  +
Sbjct: 373 RCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAI 432

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              +    L+ GRQ+H Q +     S +   N+L+ MYA+CG  + A  +F N+  +  +
Sbjct: 433 ISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAI 492

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W AMI+A  Q G   +A+ LF EM +  I  D+ +F +++ A +    +  G++     
Sbjct: 493 SWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFD-- 550

Query: 403 IRSGFMSNVFSGSA-------LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQ 454
                M NV+  +        ++D+  ++G   +A +  + MP E     W AL++ C  
Sbjct: 551 ----SMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRI 606

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +G+    +++ E + +   Q D   +L
Sbjct: 607 HGNIDLGIEAAERLFELKPQHDGTYVL 633


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/702 (37%), Positives = 413/702 (58%), Gaps = 32/702 (4%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           TLL   S   + ++  Q+HA I++    S  ++ ++++  Y  +  L  +  +F  +P  
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 138 DS-VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
            + +++ ++I  +   GL   ++  F++M   G  P    F + L +   + D+  G  V
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEA---------------------------- 228
           H  +++     +++  NAL+++YSK   + E                             
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 229 -RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
            RK+F  MP+ D VS+N +I+  A N  ++++L + RE+         F  S++L + A 
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            ++L  G++IH   I     ++V + +SL+DMYAKC R +++  +F  L     + W ++
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+  VQ G  +E L  F +M  A I  +  +F+SI+ A A L +L LGKQLH ++IRS F
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
             NVF  SAL+DMYAK G+++ A   F +M   ++VSW A+I   A +G A   +  F+ 
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M   G +P+ V+ ++VL+ACSH GL++E  +YFNSMTQ Y++ P  EHYA++ D+L R G
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 488

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             +EA + ++ M  EP   +WS+++ +CR+HKN+E A+K + +LF ++  ++   YV +S
Sbjct: 489 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDP-QNIGAYVLLS 547

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
           NIY+ AG+W+   +++ AMR++G++K  A SW+E+K+KVH F A D+ HP  + I   ++
Sbjct: 548 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALK 607

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            L+++M++EGY  DT+  LHD +EE K   L  HSERLAI F +I+TP G+ I V KNLR
Sbjct: 608 VLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 667

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            C DCH A K ISKI GREI VRD+SRFHHFKDG CSC DFW
Sbjct: 668 VCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 3/182 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +  +  +F  +     +SW  +I G  Q   F E  K F  M       P
Sbjct: 277 LIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI-AKIKP 335

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++V+F++++  C+   T +   Q+H  II+  ++  + I ++LVD Y K   +  AR +F
Sbjct: 336 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 395

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
            +M   D VS+ A+I G+A  G   +AI LF  M+  G KP+   F A L+A    GL D
Sbjct: 396 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 455

Query: 190 IA 191
            A
Sbjct: 456 EA 457



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K GN+ TAR +F+ M     VSWT +I GY+      +A  LF  
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  + G  P+YV F  +L+ CS     +E
Sbjct: 429 MEVE-GVKPNYVAFMAVLTACSHAGLVDE 456


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/750 (34%), Positives = 424/750 (56%), Gaps = 13/750 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN   +  L++ Y   GN+A AR  F+ + +R   +W ++I GY +     E  + F   
Sbjct: 84  QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF 143

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PDY TF ++L  C      N   ++H   +KFG+   + +  SL+  YC+   
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRNVTDGN---KIHCLALKFGFMWDVYVAASLIHLYCRYGA 200

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALS 182
           +  AR +F EMP +D  S+NA+I+G+ + G  +EA+ L       G +  D  T  + LS
Sbjct: 201 VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLS 255

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A     D   G  +H++ +K      +FV+N L+DLY++   + + +K+F  M   D +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLIS 315

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  Y  NEQ   ++ LF+E++ +R         +L S+++   +++  R +   T+
Sbjct: 316 WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTL 375

Query: 303 VTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                + ++ + N++V MYAK G  + A+ +F  L +   + W  +IS Y Q G   EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAI 435

Query: 362 NLF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            ++  +E     ISA+Q T+ S+L A ++  +L  G +LH  ++++G   +VF G++L D
Sbjct: 436 EMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLAD 495

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY K G L DA+  F ++P  N V WN LI+    +G  +  +  F++M+  G +PD ++
Sbjct: 496 MYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 555

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +++LSACSH GL++EG   F  M   Y + P  +HY  MVD+  R+G  + A   +  M
Sbjct: 556 FVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSM 615

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P +PD  +W +++++CR+H N++  K A++ LF++E       +V +SN+YA AG+WE V
Sbjct: 616 PLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHVGYHVLLSNMYASAGKWEGV 674

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            +++     +G+RK   +S +E+ +KV VF   ++ HP   E+ R++  L +++K  GY 
Sbjct: 675 DEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYV 734

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD    L D +++ K   L  HSERLA+AFALI TP  + I + KNLR C DCH+  K I
Sbjct: 735 PDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFI 794

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SKIT REI VRDS+RFHHFK+G CSC D+W
Sbjct: 795 SKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 249/527 (47%), Gaps = 50/527 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N +ISGY +SGN                                +EA  L 
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNA-------------------------------KEALTL- 238

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
               +DG    D VT  +LLS C+E    N  + +H+  IK G  S L + N L+D Y +
Sbjct: 239 ----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE---AIKLFVEMQHLGFKPSDFTF 177
              L   ++VF  M  +D +S+N++I  +    LNE+   AI LF EM+    +P   T 
Sbjct: 295 FGSLKDCQKVFDRMYVRDLISWNSIIKAYE---LNEQPLRAILLFQEMRLSRIQPDCLTL 351

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +  S    L +I   R V  F ++   F+E++ + NA++ +Y+K   V  AR +F  +P
Sbjct: 352 ISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFR--ELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
             D +S+N +I+ YA N    E+++++   E +      +Q  + ++L   +    L+ G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
            ++H + +      +V V  SL DMY KCGR ++A  +F  +  +++VPW  +I+ +   
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFS 413
           G+ E+A+ LF EM    +  D  TF ++L A +    +  G+     +    G   ++  
Sbjct: 532 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKH 591

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSG 472
              ++D+Y ++G L+ A+   K MP +   S W AL+SAC  +G+      + E + +  
Sbjct: 592 YGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE-- 649

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
            +P+ V    +LS         EG+    S+T    LR K   ++SM
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLR-KTPGWSSM 695


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/744 (37%), Positives = 425/744 (57%), Gaps = 16/744 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +IS + K G+ + A  +F  +  +  V + I++ GY++ +   +A   F+ M  D   + 
Sbjct: 85  VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCD---EV 141

Query: 72  DYVT--FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             V   +A LL  C E     +  ++H  II  G+ S L +  +++  Y K R +D A +
Sbjct: 142 RLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ M  KD VS+  L+ G+A+ G  + A++L ++MQ  G KP   T  + L A   +  
Sbjct: 202 MFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +GR +H +  ++ F   V V NALLD+Y K      AR +F  M     VS+N MI  
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDG 321

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVV---ANKLDLQIGRQIHTQTIVTT 305
            A N + +E+   F ++     D  + P   T++ V+   AN  DL+ G  +H       
Sbjct: 322 CAQNGESEEAFATFLKM----LDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLK 377

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S V V NSL+ MY+KC R + A  IF NL   + V W AMI  Y Q G ++EALNLF 
Sbjct: 378 LDSNVSVMNSLISMYSKCKRVDIAASIFNNLEK-TNVTWNAMILGYAQNGCVKEALNLFC 436

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M    I  D  T   ++ A A+ +     K +H   +R+   +NVF  +AL+DMYAK G
Sbjct: 437 MMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCG 496

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           ++K A + F  M ER++++WNA+I     +G  + TL  F +M +   +P+ ++ LSV+S
Sbjct: 497 AIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVIS 556

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH G +EEGL  F SM + Y L P  +HY++MVD+L R+G  D+A   + +MP +P  
Sbjct: 557 ACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGI 616

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +  +++ +C+IHKN+E  +KAA +LFK++   +   +V ++NIYA    W+ V++V+ A
Sbjct: 617 SVLGAMLGACKIHKNVELGEKAAQKLFKLDP-DEGGYHVLLANIYASNSMWDKVAKVRTA 675

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M ++G+ K    SWVEL++++H F +    HP++ +I   +E L  E+K  GY PD   +
Sbjct: 676 MEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-S 734

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           +HD +E++K + L  HSERLAIAF L+NT  G+ + + KNLR C DCH   K IS +TGR
Sbjct: 735 IHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGR 794

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD  RFHHFK+G CSC D+W
Sbjct: 795 EIIVRDLRRFHHFKNGSCSCGDYW 818



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 148/282 (52%), Gaps = 8/282 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN L+  Y K G+   AR +F  M  +T VSW  +I G +Q  +  EAF  F+ M  D G
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKM-LDEG 342

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P  VT   +L  C+          VH  + K   +S + + NSL+  Y K + +D+A 
Sbjct: 343 EVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAA 402

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  + +K +V++NA+I G+A+ G  +EA+ LF  MQ  G K   FT    ++A   LA
Sbjct: 403 SIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITA---LA 458

Query: 189 DIALGRQ---VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           D ++ RQ   +H   V+     NVFV+ AL+D+Y+K   +  ARKLF  M E   +++N 
Sbjct: 459 DFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNA 518

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           MI  Y  +   KE+L LF E+Q      +   F +++S  ++
Sbjct: 519 MIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSH 560



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    N LIS Y K   +  A  +FN++ ++T V+W  +I GY+Q    +EA  LF  
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCM 437

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M++  G   D  T   +++  ++     +   +H   ++   ++ + +  +LVD Y K  
Sbjct: 438 MQSQ-GIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCG 496

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR++F  M ++  +++NA+I G+   G+ +E + LF EMQ    KP+D TF + +S
Sbjct: 497 AIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVIS 556

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVF-VANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           A      +  G  +   + +  ++E      +A++DL  +   + +A     EMP   G+
Sbjct: 557 ACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGI 616

Query: 242 S 242
           S
Sbjct: 617 S 617



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N   VST  L+  Y K G + TAR+LF+ M +R  ++W  +I GY      +E   LF
Sbjct: 478 MDNNVFVST-ALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLF 536

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYC 119
            +M+  G   P+ +TF +++S CS      E + +   + +  Y    +   +++VD   
Sbjct: 537 NEMQK-GAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE-----AIKLF 162
           +   LD A    +EMP K  +S    + G  K   N E     A KLF
Sbjct: 596 RAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLF 643


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/699 (38%), Positives = 400/699 (57%), Gaps = 2/699 (0%)

Query: 51  NQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII 110
           N   EA  + ++ R   G   D   +  +L  C +        QVH  IIK        +
Sbjct: 7   NTLSEAIVVLMN-RLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65

Query: 111 CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF 170
            N+L+  Y +   L  AR VF  + +K   S+NA+I G+ +    E+A++LF EM H G 
Sbjct: 66  MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P+  T+   L A   L+ +  G++VHA +       +V V  ALL +Y K   + EAR+
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F  +   D +S+ VMI  YA +   KE+ +L  +++   F  +   + ++L+  A++  
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L+  +++H   +      +V+V  +LV MYAK G  ++A+ +F  +     V W  MI A
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           + + G   EA +LF++M       D   F SIL A A   +L   K++H   + SG   +
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  G+AL+ MY+KSGS+ DA   F  M  RN+VSWNA+IS  AQ+G  Q  L+ F  M  
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G +PD V+ ++VLSACSH GL++EG   + +MTQ Y + P   H   MVD+L R+G   
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA+  +  M  +PDE  W +++ SCR + N+E  +  A +  K++  ++AA YV +SNIY
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDP-KNAATYVLLSNIY 544

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           A AG+W+ VS V+  MRERG+RK    SW+E+ +K+H F   D  HP+  EI    + ++
Sbjct: 545 AEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVI 604

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           +++K EGY PDT   L +++ + K   +  HSE+LAI + L++TP G+PI V KNLR CT
Sbjct: 605 EKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCT 664

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH A KLISK+ GREI VRD++RFHHFKDG CSC D+W
Sbjct: 665 DCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 230/458 (50%), Gaps = 3/458 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN    N L+  Y++ G L  AR +F+++V ++  SW  +I GY +     +A +LF +M
Sbjct: 61  QNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREM 120

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             + G  P+  T+  +L  C+         +VHA I   G  S + +  +L+  Y K   
Sbjct: 121 CHE-GVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ ARR+F  +   D +S+  +I  +A+ G  +EA +L ++M+  GFKP+  T+ + L+A
Sbjct: 180 INEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +   ++VH   +      +V V  AL+ +Y+K   + +AR +F  M   D VS+
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSW 299

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           NVMI  +A + +  E+  LF ++Q          F ++L+  A+   L+  ++IH   + 
Sbjct: 300 NVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALD 359

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +    +V+V  +LV MY+K G  ++A+ +F  +   + V W AMIS   Q G  ++AL +
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEV 419

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M    +  D+ TF ++L A +    +  G+ Q  +     G   +V   + ++D+  
Sbjct: 420 FRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLG 479

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++G L +A      M  + +  +W AL+ +C   G+ +
Sbjct: 480 RAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVE 517


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/740 (36%), Positives = 422/740 (57%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K+ +    R +F+ M  +  VSWT L+ GY++     E   L   M+ +G  +P
Sbjct: 145 LVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEG-VNP 203

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFAT+L   ++       +QVHA I+K G+     +CN+L+  Y K   +  A  VF
Sbjct: 204 NGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVF 263

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +DSV++N +I G+A  G   E  ++F  M+  G K S   F  AL       ++ 
Sbjct: 264 DSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELN 323

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
             +Q+H  VVK  +     +  AL+  YSK   V EA KLF        V ++  MI  +
Sbjct: 324 FTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGF 383

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N   ++++ LF ++       + F +ST+L+   + L      Q+H Q I        
Sbjct: 384 VQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQLHAQIIKAYYEKVP 439

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            VA +L+D Y K G   E+  +F ++     V W+AM++   Q  + E+A+ +FI++ + 
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499

Query: 371 NISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ TF+S++ A S+  A++  GKQ+H+  ++SG  + +   SALL MY+K G+++ 
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F    ER+IVSWN++I+   Q+GDA+  L+ F+ M   G   D V+ + VL+AC+H
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTH 619

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YFN M + Y +  K EHY+ MVD+  R+G FD+A  ++  MPF     +W 
Sbjct: 620 AGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWR 679

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+H+NLE  K AA++L  ++   DA  YV +SNI+AVAG WE  + V+K M ER
Sbjct: 680 TLLAACRVHRNLELGKLAAEKLVSLQP-NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+E+K+++  F A D  HP ++ +  K+E L  ++K  GY+PDT+   HD 
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K   L  HSERLAIA+ LI  P G+PI + KNLR C DCH  I+LIS I  R + V
Sbjct: 799 EEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIV 858

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHFK G CSC  +W
Sbjct: 859 RDSNRFHHFKGGVCSCGGYW 878



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/546 (30%), Positives = 282/546 (51%), Gaps = 14/546 (2%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A +LF+    +    +  L+  +S+ N  REA  LF D+ + G    D +T +  L  C 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG-LGVDGLTLSCALKVCG 115

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                    QVH   +K G+   + +  SLVD Y K    +  R +F EM  K+ VS+ +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           L++G+A+ GLN+E I L  +MQ  G  P+ FTFA  L A    + I  G QVHA +VK  
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F    FV NAL+ +Y K + V +A  +F  M   D V++N+MI  YA    Y E  ++F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            ++      S+  F T L + + + +L   +Q+H   +         +  +L+  Y+KC 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 325 RFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
             +EA ++F  A+ +H + V WTAMI  +VQ  N E+A++LF +M R  +  +  T++++
Sbjct: 356 SVDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L         SL  QLH+ +I++ +       +ALLD Y K+G++ ++ + F  +P ++I
Sbjct: 415 LAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFN 501
           V+W+A+++  AQ  D++  ++ F  +V+ G +P+  +  SV++AC S    +E G Q   
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           +  +  K        A ++ +  + G  + AEK+  +   E D + W+S+I     H + 
Sbjct: 531 TAVKSGKSNALCVSSA-LLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGD- 587

Query: 562 EFAKKA 567
             AKKA
Sbjct: 588 --AKKA 591



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 234/451 (51%), Gaps = 9/451 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI  Y+KS  +  A  +F+SMV R +V+W I+IGGY+    + E F++F  MR 
Sbjct: 240 TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRL 299

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G       F T L  CS+    N   Q+H  ++K GY     I  +L+ +Y K   +D
Sbjct: 300 -AGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 126 LARRVFKEM-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            A ++F       + V++ A+I GF +   NE+A+ LF +M   G +P+ FT++  L+  
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAG- 417

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                 +L  Q+HA ++K  + +   VA ALLD Y K   VVE+ ++F  +P  D V+++
Sbjct: 418 ---KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHTQTIV 303
            M+T  A     ++++++F +L       +++ FS++++  ++    ++ G+QIH   + 
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +   + + V+++L+ MY+K G  E A+++F        V W +MI+ Y Q G+ ++AL +
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEV 594

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYA 422
           F  M    +  D  TF  +L A      +  G++  + +I+   +   +   S ++D+Y+
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYS 654

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++G    A+     MP   +   W  L++AC
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAAC 685



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 214/448 (47%), Gaps = 7/448 (1%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A ++F E P KD   +N L+  F++   + EA+ LF ++   G      T + AL     
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  +GRQVH   +K+ F+E+V V  +L+D+Y K +   + R +F EM   + VS+  +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           ++ YA N    E + L  ++Q    + + F F+T+L  +A++  ++ G Q+H   +    
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                V N+L+ MY K     +A+ +F ++    +V W  MI  Y   G   E   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  A +   +  F + L+  ++   L+  KQLH  V+++G+       +AL+  Y+K  S
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 427 LKDAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + +A + F       N+V+W A+I    QN + +  +  F  M + G +P+  +  +VL+
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
                 L +   Q   +  +K    P      +++D   ++G   E+ ++   +P   D 
Sbjct: 417 GKPSSLLSQLHAQIIKAYYEKV---PSVA--TALLDAYVKTGNVVESARVFYSIP-AKDI 470

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFK 573
           + WS+++      ++ E A +   QL K
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVK 498


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 283/845 (33%), Positives = 444/845 (52%), Gaps = 109/845 (12%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y ++G +  AR +F+ M +R   SWT ++  Y     + E  KLF  M  +G   P
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRP 188

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+  F  +   CSE         V+  ++  G+     +  S++D + K   +D+ARR F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248

Query: 132 KEMPQK-----------------------------------DSVSFNALITGFAKEGLNE 156
           +E+  K                                   D V++NA+I+G+A+ G  E
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308

Query: 157 EAIKLFVEMQHL------------------------------------GFKPSDFTFAAA 180
           EA K F+EM  L                                    G KP+  T A+A
Sbjct: 309 EASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASA 368

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           +SA   L+ +  GR++H + +K   ++ ++ V N+L+D Y+K   V  AR+ FG + + D
Sbjct: 369 VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD 428

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQF--------------TRF-------------- 271
            VS+N M+  YA    ++E+++L  E++F              T F              
Sbjct: 429 LVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQ 488

Query: 272 -------DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
                  D +    S  L+      +L++G++IH   +         V ++L+ MY+ C 
Sbjct: 489 RMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD 548

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E A  +F+ LS    V W ++ISA  Q G    AL+L  EM  +N+  +  T  S L 
Sbjct: 549 SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 608

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A ++LA+L  GK++H F+IR G  +  F  ++L+DMY + GS++ + + F  MP+R++VS
Sbjct: 609 ACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS 668

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN +IS    +G     +  F+     G +P+ ++  ++LSACSH GLIEEG +YF  M 
Sbjct: 669 WNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMK 728

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            +Y + P  E YA MVD+L R+G F+E  + + +MPFEP+  +W S++ +CRIH N + A
Sbjct: 729 TEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 788

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           + AA  LF++E  + +  YV M+NIY+ AG+WE  ++++  M+ERGV K    SW+E+K 
Sbjct: 789 EYAARYLFELEP-QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
           K+H F   D  HP   +I  K+E+L  ++K+ GY PDT+  L D DE+ K  SL  HSE+
Sbjct: 848 KLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEK 907

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           +A+AF LI+T  G+P+ ++KNLR C DCH+A K ISK+  R+I +RD+ RFHHF DG CS
Sbjct: 908 IALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCS 967

Query: 745 CRDFW 749
           C D+W
Sbjct: 968 CGDYW 972



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 244/534 (45%), Gaps = 88/534 (16%)

Query: 69  SDPDYVT--FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           ++PD     +A++L  C +        QVHA ++  G +    + + L++ YC+  C++ 
Sbjct: 83  TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F +M +++  S+ A++  +   G  EE IKLF  M + G +P  F F     A   
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 202

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L +  +G+ V+ +++   F  N  V  ++LD++ K   +  AR+ F E+   D   +N+M
Sbjct: 203 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 262

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           ++ Y    ++K++LK   +++ +     Q  +                            
Sbjct: 263 VSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------------- 294

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-----STVPWTAMISAYVQKGNLEEAL 361
                  N+++  YA+ G+FEEA + F  +  +     + V WTA+I+   Q G   EAL
Sbjct: 295 -------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM-SNVFSGSALLDM 420
           ++F +M    +  +  T AS + A   L+ L  G+++H + I+   + S++  G++L+D 
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDY 407

Query: 421 YAKS-------------------------------GSLKDAIQTFKEMP----ERNIVSW 445
           YAK                                GS ++AI+   EM     E +I++W
Sbjct: 408 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITW 467

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           N L++   Q GD +A L+ F+ M   G  P++ ++   L+AC     ++ G +       
Sbjct: 468 NGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE-----IH 522

Query: 506 KYKLRPKKEHYASMVDILCR--SGC--FDEAEKLMAQMPFEPDEIMWSSVINSC 555
            Y LR   E    +   L    SGC   + A  + +++    D ++W+S+I++C
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISAC 575



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 214/475 (45%), Gaps = 31/475 (6%)

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEA--------RKLFGEMPEVDGVSYNVMITCY 250
           F + +NF       + L  L +++ C+V +        RKL      + G S    +   
Sbjct: 8   FALNSNFAIQPKGTSPLQTLPTRNCCIVASTNTKSQNLRKLTNARQRITGFSGGGSV--- 64

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     +  L   +  T  D     ++++L       +L++G Q+H Q +V       
Sbjct: 65  HRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + + L+++Y + G  E+A+ +F  +S  +   WTA++  Y   G+ EE + LF  M   
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D   F  + +A +EL +  +GK ++ +++  GF  N     ++LDM+ K G +  A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F+E+  +++  WN ++S     G+ +  LK   DM  SG +PD V+  +++S  +  
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIM 547
           G  EE  +YF  M      +P    + +++    ++G   EA  +  +M  E   P+ I 
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            +S +++C     L   ++      K+E+L D+   V  S    +   +     V+ A R
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEEL-DSDLLVGNS----LVDYYAKCRSVEVARR 419

Query: 608 ERG-VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           + G +++    SW  + +   +  +++E           IE L+ EMK +G +PD
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEE----------AIE-LLSEMKFQGIEPD 463



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 207/447 (46%), Gaps = 49/447 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + VS N +++GY   G+   A EL + M    ++   ++W  L+ G++Q    + A + F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M + G  DP+  T +  L+ C +        ++H  +++        + ++L+  Y  
Sbjct: 488 QRMHSMG-MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSG 546

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L++A  VF E+  +D V +N++I+  A+ G +  A+ L  EM     + +  T  +A
Sbjct: 547 CDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 606

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   LA +  G+++H F+++       F+ N+L+D+Y +   + ++R++F  MP+ D 
Sbjct: 607 LPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL 666

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQ 296
           VS+NVMI+ Y  +    +++ LF++ +      +   F+ LLS  ++   ++ G    + 
Sbjct: 667 VSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM 726

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           + T+  +  A+ +      +VD+ ++ G+F E  E    +    +   W +++ A     
Sbjct: 727 MKTEYAMDPAVEQYAC---MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA----- 778

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
                       CR + + D A +A+  R   EL   S G  +         M+N+    
Sbjct: 779 ------------CRIHCNPDLAEYAA--RYLFELEPQSSGNYV--------LMANI---- 812

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNI 442
                Y+ +G  +DA +    M ER +
Sbjct: 813 -----YSAAGRWEDAAKIRCLMKERGV 834


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 270/751 (35%), Positives = 430/751 (57%), Gaps = 9/751 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLF 60
           +++T+  N LI  Y K G L +A  +F  +    R   SW  ++ G  Q  +  EA  LF
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M++ G     Y + A +L  C+E    +   ++HA ++K G + + I CN+L+  Y K
Sbjct: 256 RGMQSAGFPMNSYTSVA-VLQVCAELGLLSLGRELHAALLKCG-SELNIQCNALLVMYAK 313

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A RVF ++ +KD +S+N++++ + +     EAI  F EM   GF+P D     +
Sbjct: 314 YGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQP-DHACVVS 372

Query: 181 LSAGVG-LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           LS+ +G L+ +  GR+ HA+ +K     ++ V N L+D+Y K   +  + K+F  M   D
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD 432

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            +S+  ++ C+A + ++ E+L++  ELQ            ++L        + + +Q+H 
Sbjct: 433 HISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC 492

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I    + ++ + N L+D+Y +CG F+ +  +F  +     V WT+MI+     G L  
Sbjct: 493 YAI-RNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNG 551

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ LF EM +ANI  D     SIL A A L+SL+ GKQ+H F+IR  F       S+L+D
Sbjct: 552 AVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVD 611

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+  GS+  AI+ F+    +++V W A+I+A   +G  +  +  F+ M+Q+G  PD VS
Sbjct: 612 MYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVS 671

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L++L ACSH  L+EEG  Y + M  KY+L+P +EHYA +VDIL RSG  +EA + +  M
Sbjct: 672 FLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTM 731

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P +P   +W +++ +CR+H+N   A  AA++L ++E   +   Y+ +SN++A  G+W + 
Sbjct: 732 PMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEP-DNPGNYILVSNVFAEMGKWNNA 790

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GY 658
            + +  M ERG+RK  A SW+E+ + +H FT+ D  H  +  I  K+  + + +++E GY
Sbjct: 791 KETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGY 850

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
             DT   LHD  EE K++ L  HSER+AIAF LI+T  G PI + KNLR C DCH   KL
Sbjct: 851 VEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKL 910

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +SK+  R+I VRD++RFHHF  G CSC DFW
Sbjct: 911 VSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 172/566 (30%), Positives = 296/566 (52%), Gaps = 12/566 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG--GS 69
           L+  Y + G +  AR LFN M  RT  SW  L+G Y       EA +++  MR     GS
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T A++L  C          +VH   +K G +   ++ N+L+  Y K   LD A R
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALR 220

Query: 130 VFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           VF+ + Q  +D  S+N++++G  + G   EA+ LF  MQ  GF  + +T  A L     L
Sbjct: 221 VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAEL 280

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             ++LGR++HA ++K     N+   NALL +Y+K+  V  A ++FG++ E D +S+N M+
Sbjct: 281 GLLSLGRELHAALLKCGSELNI-QCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSML 339

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +CY  N  Y E++  F E+    F        +L S + +   L  GR+ H   I     
Sbjct: 340 SCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLH 399

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++++V N+L+DMY KCG  E + ++F ++     + WT +++ + Q     EAL + +E+
Sbjct: 400 TDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILEL 459

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  I  D     SIL     L S+SL KQ+H + IR+G +  +   + L+D+Y + G  
Sbjct: 460 QKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILE-NRLIDIYGECGEF 518

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             ++  F+ + +++IVSW ++I+ C  NG     +  F +M ++  QPDSV+L+S+L A 
Sbjct: 519 DHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAI 578

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    + +G Q    + ++     +    +S+VD+    G  + A ++  +   + D ++
Sbjct: 579 AGLSSLTKGKQVHGFLIRR-NFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVL 636

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFK 573
           W+++IN+  +H +    K+A D LFK
Sbjct: 637 WTAMINATGMHGH---GKQAID-LFK 658



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 246/513 (47%), Gaps = 22/513 (4%)

Query: 94  QVHADIIKFGY---NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           QVHA  +  G    +    +   LV  Y +   +D ARR+F  MP +   S+NAL+  + 
Sbjct: 78  QVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYL 137

Query: 151 KEGLNEEAIKLFVEMQ---HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
             G   EA++++  M+     G  P   T A+ L A     D   G +VH   VK    +
Sbjct: 138 SSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDK 197

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPE--VDGVSYNVMITCYAWNEQYKESLKLFRE 265
           +  VANAL+ +Y+K   +  A ++F  + +   D  S+N +++    N +  E+L LFR 
Sbjct: 198 STLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRG 257

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCG 324
           +Q   F  + +    +L V A    L +GR++H   +     SE+ +  N+L+ MYAK G
Sbjct: 258 MQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG--SELNIQCNALLVMYAKYG 315

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           R + A  +F  ++    + W +M+S YVQ     EA++ F EM +     D A   S+  
Sbjct: 316 RVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSS 375

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A   L+ L+ G++ H++ I+    +++  G+ L+DMY K GS++ + + F+ M  R+ +S
Sbjct: 376 ALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           W  +++  AQ+      L+   ++ + G   DS+ + S+L  C  CGL    L       
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC--CGLKSISLL---KQV 490

Query: 505 QKYKLRPKKEHYA---SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
             Y +R           ++DI    G FD +  L  ++  + D + W+S+IN C  +  L
Sbjct: 491 HCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRL 549

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
             A     ++ K     D+   V++  + A+AG
Sbjct: 550 NGAVFLFTEMQKANIQPDSVALVSI--LVAIAG 580



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 163/329 (49%), Gaps = 33/329 (10%)

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK---VANSLVDM 319
            R+L  TR   ++  +  +L +VA +     GRQ+H   + T +++E     +A  LV M
Sbjct: 46  LRQLT-TRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFM 104

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI----SAD 375
           Y +CGR ++A+ +F  +   +   W A++ AY+  G+  EA+ ++  M RA+     + D
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAM-RASAAPGSAPD 163

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             T AS+L+A         G ++H   ++ G   +    +AL+ MYAK G L  A++ F+
Sbjct: 164 GCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFE 223

Query: 436 EMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
            + +  R++ SWN+++S C QNG     L  F  M  +G+  +S + ++VL  C+  GL+
Sbjct: 224 WLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLL 283

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS--------GCFDEAEKLMAQMPFEPDE 545
             G +   ++ +            S ++I C +        G  D A ++  Q+  E D 
Sbjct: 284 SLGRELHAALLK----------CGSELNIQCNALLVMYAKYGRVDSALRVFGQIA-EKDY 332

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           I W+S++ SC +  +  F  +A D   +M
Sbjct: 333 ISWNSML-SCYVQNS--FYAEAIDFFGEM 358


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/746 (36%), Positives = 433/746 (58%), Gaps = 17/746 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y    +   A+  F+++  R   SWT L+  ++   Q +E  +    MR DG   PD VT
Sbjct: 2   YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAVT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F T L  C +P++  + I++H  ++         + N+L++ Y K   L  A+RVF +M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 136 Q-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           + ++ +S++ +    A  G   EA++ F  M  LG K +       LSA    A +  GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV--DGVSYNVMITCYAW 252
            +H+ +  + F   + VANA++ +Y +   V EARK+F  M E   D VS+N+M++ Y  
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N++ K++++L++ +Q  R D+    + +LLS  ++  D+ +GR +H Q +       V V
Sbjct: 241 NDRGKDAIQLYQRMQL-RPDK--VTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR--- 369
            N+LV MYAKCG   EA+ +F  +   S + WT +ISAYV++  + EA +LF +M     
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 370 ----ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
                 +  D   F +IL A A++++L  GK +       G  S+   G+A++++Y K G
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 417

Query: 426 SLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            +++A + F  +  R ++  WNA+I+  AQ G +   LK F  M   G +PDS S +S+L
Sbjct: 418 EIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 477

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
            ACSH GL ++G  YF SMT +Y+   +  +H+  + D+L R G   EAE+ + ++P +P
Sbjct: 478 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 537

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D + W+S++ +CR H++L+ AK+ A++L ++E  R A  YVA+SNIYA   +W +V++V+
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVANKLLRLEP-RCATGYVALSNIYAELQKWHAVAKVR 596

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M E+GV+K    S +E+   +H F   D+ HP+  EIR ++  L  +MK+ GY PDT 
Sbjct: 597 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTK 656

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LH  DE+ K   L  HSERLAIA  LI+TP G+P+ V KNLR C+DCH A KLISKI 
Sbjct: 657 MVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIA 716

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GR+I VRD +RFH FKDG CSC+D+W
Sbjct: 717 GRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 212/493 (43%), Gaps = 71/493 (14%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y+  D   +A+  F  + + +  S+  ++  +A + Q KE+L+    ++          
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F T L    +   L+ G +IH   + +    + KV+N+L++MY KCG    AK +FA + 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 338 HI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
              + + W+ M  A+   GN+ EAL  F  M    I A ++   +IL A +  A +  G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQ 454
            +HS +  SGF S +   +A++ MY + G++++A + F  M E  R++VSWN ++S    
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-------------------------- 488
           N   +  ++ ++ M     +PD V+ +S+LSACS                          
Sbjct: 241 NDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 489 ---------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                     CG   E    F+ M Q+  +      + +++    R     EA  L  QM
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSII-----SWTTIISAYVRRRLVAEACHLFQQM 352

Query: 540 ----------PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
                       +PD + + +++N+C     LE  K  ++Q        D A   A+ N+
Sbjct: 353 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 412

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           Y   G+ E   ++  A+  R                V ++ A   ++ Q  +    ++ L
Sbjct: 413 YGKCGEIEEARRIFDAVCSR--------------PDVQLWNAMIAVYAQFGQSHEALK-L 457

Query: 650 MQEMKKEGYKPDT 662
              M+ EG +PD+
Sbjct: 458 FWRMEMEGVRPDS 470



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 10/254 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF--- 60
           +N +  N L+S Y K G+   AR +F+ M  R+ +SWT +I  Y ++    EA  LF   
Sbjct: 293 KNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM 352

Query: 61  VDMRTDGGSD---PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           +++  +G S    PD + F T+L+ C++     +   V       G +S   +  ++V+ 
Sbjct: 353 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 412

Query: 118 YCKIRCLDLARRVFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
           Y K   ++ ARR+F  +  +  V  +NA+I  +A+ G + EA+KLF  M+  G +P  F+
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 472

Query: 177 FAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           F + L A    GL D              N    +     + DL  +   + EA +   +
Sbjct: 473 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 532

Query: 235 MP-EVDGVSYNVMI 247
           +P + D V++  ++
Sbjct: 533 LPVKPDAVAWTSLL 546


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/748 (35%), Positives = 424/748 (56%), Gaps = 6/748 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ V    L++ Y   G+L+ +   F  +  +   SW  ++  Y ++ ++R++     ++
Sbjct: 81  QDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTEL 140

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            +  G  PD+ TF  +L  C       ++   H  ++K G+   + +  SL+  Y +   
Sbjct: 141 LSLSGVRPDFYTFPPVLKACLSLADGEKM---HCWVLKMGFEHDVYVAASLIHLYSRFGA 197

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +++A +VF +MP +D  S+NA+I+GF + G   EA+++   M+    K    T ++ L  
Sbjct: 198 VEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPI 257

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                D+  G  VH +V+K     +VFV+NAL+++YSK   + +A+++F  M   D VS+
Sbjct: 258 CAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSW 317

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  Y  N+    +L  F+E+ F           +L S+     D +IGR +H   + 
Sbjct: 318 NSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVR 377

Query: 304 TTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
              +  ++ + N+LV+MYAK G  + A+ +F  L     + W  +I+ Y Q G   EA++
Sbjct: 378 CRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAID 437

Query: 363 LFIEMCRA-NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +  M     I  +Q T+ SIL A + + +L  G ++H  +I++    +VF  + L+DMY
Sbjct: 438 AYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMY 497

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G L+DA+  F E+P+   V WNA+IS+   +G  +  L+ F+DM   G + D ++ +
Sbjct: 498 GKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           S+LSACSH GL++E    F++M ++Y+++P  +HY  MVD+  R+G  ++A  L++ MP 
Sbjct: 558 SLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI 617

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           + D  +W +++ +CRIH N E    A+D+L +++   +   YV +SNIYA  G+WE   +
Sbjct: 618 QADASIWGTLLAACRIHGNAELGTFASDRLLEVDS-ENVGYYVLLSNIYANVGKWEGAVK 676

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+   R+RG+RK   +S V + S V VF A ++ HPQ  EI  ++  L  +MK  GY PD
Sbjct: 677 VRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPD 736

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            S  L D +E+ K E L  HSERLAI F +I+TP  SPI + KNLR C DCH A K ISK
Sbjct: 737 YSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISK 796

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IT REI VRDS+RFHHFKDG CSC D+W
Sbjct: 797 ITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 266/502 (52%), Gaps = 17/502 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  +   C+  + A    Q+HA ++  G    +++   LV  Y  +  L L+   FK + 
Sbjct: 54  FNLVFRSCTNINVAK---QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGR 194
           +K+  S+N++++ + + G   +++    E+  L G +P  +TF   L A + LAD   G 
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GE 167

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H +V+K  F  +V+VA +L+ LYS+   V  A K+F +MP  D  S+N MI+ +  N 
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L++   ++           S++L + A   D+  G  +H   I     S+V V+N
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +L++MY+K GR ++A+ +F  +     V W ++I+AY Q  +   AL  F EM    +  
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQT 433
           D  T  S+     +L+   +G+ +H FV+R  ++  ++  G+AL++MYAK GS+  A   
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ--PDSVSLLSVLSACSHCG 491
           F+++P R+++SWN LI+  AQNG A   + ++ +M++ G    P+  + +S+L A SH G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVG 466

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +++G++    +  K  L         ++D+  + G  ++A  L  ++P E   + W+++
Sbjct: 467 ALQQGMKIHGRLI-KNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET-SVPWNAI 524

Query: 552 INSCRIHKNLEFAKKAADQLFK 573
           I+S  IH + E     A QLFK
Sbjct: 525 ISSLGIHGHGE----KALQLFK 542



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           ++++ KQLH+ ++  G   +V   + L+ +YA  G L  +  TFK +  +NI SWN+++S
Sbjct: 63  NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122

Query: 451 ACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSAC--------SHCGLIEEGLQYFN 501
           A  + G  + ++    +++  SG +PD  +   VL AC         HC +++ G ++  
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDV 182

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            +             AS++ +  R G  + A K+   MP   D   W+++I+    + N+
Sbjct: 183 YVA------------ASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNGNV 229

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
             A +  D++   E   D     +M  I A
Sbjct: 230 AEALRVLDRMKTEEVKMDTVTVSSMLPICA 259


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 270/745 (36%), Positives = 426/745 (57%), Gaps = 13/745 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ G+L  A  +F  M +R   SW +L+GGY++   F EA  L+  M   G  
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG-I 191

Query: 70  DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL-- 126
            PD  TF  +L  C   PD A    +VH  +I++G+ S + + N+L+  Y  ++C D+  
Sbjct: 192 RPDVYTFPCVLRTCGGLPDLARGR-EVHLHVIRYGFESDVDVVNALITMY--VKCGDIFS 248

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP++D +S+NA+I+G+ +  +  E ++LF  M+     P   T  + +SA   
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  LGR+VH +V+KT FV  V V N+L+ ++S   C  EA  +F +M   D VS+  M
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y  N   +++++ +  ++       +   +++LS  A    L  G  +H     T  
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S V VANSL+DMY+KC   ++A E+F  + + + + WT++I          EAL  F +
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M   ++  +  T  S+L A A + +LS GK++H+  +R+G   + F  +ALLDMY + G 
Sbjct: 489 MI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGR 547

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ A   F    E+++ SWN L++  AQ G     ++ F  M++S   PD ++  S+L A
Sbjct: 548 MEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCA 606

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS  G++ +GL+YF SM  K+ + P  +HYAS+VD+L R+G  ++A + + +MP +PD  
Sbjct: 607 CSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPA 666

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++N+CRI++N+E  + AA  +F+M+  +    Y+ + N+YA +G+W+ V++V+K M
Sbjct: 667 IWGALLNACRIYQNVELGELAAQHIFEMDT-KSVGYYILLCNLYADSGKWDEVARVRKIM 725

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           RE  +      SWVE+  +VH F   D+ HPQ  EI   +E   ++M+  G         
Sbjct: 726 RENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRR 785

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D D   K E    HSERLAIAF LINT  G+PI V KNL  C +CH  +K ISK+  R 
Sbjct: 786 DDIDAS-KAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRG 844

Query: 727 ITVRDSSRFHHFKDGFCSCRD--FW 749
           I+VRD+ +FHHFKDG CSC D  +W
Sbjct: 845 ISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 213/420 (50%), Gaps = 10/420 (2%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N+LI     +G  E+A+     MQ L     + T+ A L         + G +VH++V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T     V + NALL ++ +   +VEA  +FG+M E D  S+NV++  YA    + E+L L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           +  + +       + F  +L       DL  GR++H   I     S+V V N+L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG    A+ +F  +     + W AMIS Y +     E L LF  M    +  D  T  S+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           + A   L    LG+++H +VI++GF++ V   ++L+ M++  G   +A   F +M  +++
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSW A+IS   +NG  +  ++++  M   G  PD +++ SVLSAC+  GL+++G+     
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI----- 417

Query: 503 MTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           M  ++  R     Y     S++D+  +  C D+A ++  ++P   + I W+S+I   R++
Sbjct: 418 MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLN 476



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
           N S I+     ++I     KG+LE+AL     M    +S ++ T+ ++LR      + S 
Sbjct: 53  NPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G ++HS+V ++     V  G+ALL M+ + G L +A   F +M ER++ SWN L+   A+
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
            G     L  +  M+  G +PD  +   VL  C     +  G +    +  +Y      +
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVI-RYGFESDVD 231

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              +++ +  + G    A  +  +MP   D I W+++I+ 
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            +  N LI  Y K   +  A E+F+ + ++  +SWT +I G     +  EA   F  M  
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                P+ VT  ++LS C+     +   ++HA  ++ G      + N+L+D Y +   ++
Sbjct: 492 S--LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            A   F    +KD  S+N L+TG+A++G    A++LF +M      P + TF + L A
Sbjct: 550 PAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCA 606


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/740 (37%), Positives = 418/740 (56%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K G +   R +F  M  R  V+WT L+ GY Q     +   LF  MR +G   P
Sbjct: 141 LVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEG-VWP 199

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TF ++LS  +     +   +VHA  +KFG  S + +CNSL++ Y K   ++ A+ VF
Sbjct: 200 NPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVF 259

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           ++M  +D VS+N L+ G        EA++LF + +    K S  T++  +     L  +A
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
           L RQ+H+ V+K  F  +  V  A++D YSK   + +A  +F  MP    V S+  MI   
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     +  LF  ++      ++F +ST+L+     L      QIH Q I T      
Sbjct: 380 IQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAP 435

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+  Y+K G  EEA  IF  + H   V W+AM+S Y Q G+ + A N+FI+M   
Sbjct: 436 SVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQ 495

Query: 371 NISADQATFASILRASAE-LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ T +S + A A   A +  G+Q H+  I+  +   +  GSAL+ MYA+ GS+  
Sbjct: 496 GMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDS 555

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+   +R++VSWN++IS  AQ+G ++  L +F  M   G + D  + L+V+  C+H
Sbjct: 556 ARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTH 615

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL++EG QYF+SM   + + P  EHY+ MVD+  R+G  DE   L+  MPF    ++W 
Sbjct: 616 AGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWR 675

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HKN+E  K AA +L  +E   D+A YV +SNIYA AG+W+   +V+K M  +
Sbjct: 676 TLLGACRVHKNVELGKLAAQKLLLLEP-DDSATYVLLSNIYAAAGRWKERDEVRKLMDSK 734

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+++K+KVH F A D+ HP + +I  K++ +   +K+EGY P+TS  LHD 
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDI 794

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            EE K   L  HSERLA+AF LI TP  +P+ ++KNLR C DCH  +K++S I  REI +
Sbjct: 795 AEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIM 854

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD SRFHHF  G CSC DFW
Sbjct: 855 RDCSRFHHFNAGACSCGDFW 874



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 303/577 (52%), Gaps = 22/577 (3%)

Query: 21  NLATARELFNSMVDRTAVSWT----ILIGGYSQKNQFR-EAFKLFVDMRTDGGSDPDYVT 75
           N   AR+  + M  R A + +    + I  Y ++ + R EA   FVD+   G      V+
Sbjct: 44  NAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVS 103

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILI-ICNSLVDSYCKIRCLDLARRVFKEM 134
               + G      + E  Q+H   +K G++   + +  +LVD Y K   ++  R VF+ M
Sbjct: 104 RVLKVCGLIPDRVSGE--QLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P+++ V++ +L+TG+ +     + + LF  M+  G  P+ FTF + LSA      + LGR
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           +VHA  VK      VFV N+L+++YSK   V EA+ +F +M   D VS+N ++     NE
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L+LF + + +    SQ  +ST++ + AN   L + RQ+H+  +     S+  V  
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMT 341

Query: 315 SLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           +++D Y+KCG  ++A  IF  +    + V WTAMI   +Q  ++  A  LF  M   N+ 
Sbjct: 342 AIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVK 401

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            ++ T++++L AS  +    L  Q+H+ +I++ +      G+ALL  Y+K G+ ++A+  
Sbjct: 402 PNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSI 457

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGL 492
           FK +  +++V+W+A++S  +Q GD       F  M   G +P+  ++ S + AC S    
Sbjct: 458 FKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG 517

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           I++G Q F++++ KY+ +      +++V +  R G  D A +++ +   + D + W+S+I
Sbjct: 518 IDQGRQ-FHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVSWNSMI 575

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKL---RDAAPYVAM 586
           +    H    ++K+A D   +ME +    D A ++A+
Sbjct: 576 SGYAQHG---YSKEALDTFRQMETVGIEMDGATFLAV 609



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 216/447 (48%), Gaps = 9/447 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K G +  A+ +F  M  R  VSW  L+ G        EA +LF D R    +
Sbjct: 240 NSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRAS-MA 298

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                T++T++  C+         Q+H+ ++K G++S   +  +++D+Y K   LD A  
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFN 358

Query: 130 VFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F  MP  ++ VS+ A+I G  +      A  LF  M+    KP++FT++  L+A + + 
Sbjct: 359 IFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI- 417

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              L  Q+HA ++KTN+     V  ALL  YSK     EA  +F  +   D V+++ M++
Sbjct: 418 ---LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLS 474

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAI 307
           CY+       +  +F ++       ++F  S+ +   A+    +  GRQ H  +I     
Sbjct: 475 CYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQ 534

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V ++LV MYA+ G  + A+ +F   +    V W +MIS Y Q G  +EAL+ F +M
Sbjct: 535 DAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQM 594

Query: 368 CRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
               I  D ATF +++        +  G+Q   S V+       +   S ++D+Y+++G 
Sbjct: 595 ETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGK 654

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L + +   + MP     + W  L+ AC
Sbjct: 655 LDETMNLIEGMPFPAGAMVWRTLLGAC 681


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/730 (37%), Positives = 411/730 (56%), Gaps = 64/730 (8%)

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ------ 136
           C E     +  ++H  IIK   N    + N+L+++Y K+  +  AR VF +MPQ      
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 137 -------------------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-F 170
                                    +D VS+N+LI+G+   G   EA+K +  M   G  
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV---- 226
             +  TF+  L        + LGRQ+H  +VK  F   VFV ++L+D+Y+K   V     
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 227 ---------------------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
                                      ++++LF  M E D +S+  MIT    N    E+
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           + LFR+++       Q+ F ++L+       L+ G++IHT  I +     V V ++LVDM
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KC     A+ +F  +++ + V WTAM+  Y Q G  EEA+ +F +M R  I  D  T 
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG +S +   +AL+ +Y K GS++D+ Q F EM  
Sbjct: 375 GSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSF 434

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           R+ VSW AL+S  AQ G A  T+  FE M+  G +PD+V+ ++VLSACS  GL+E G QY
Sbjct: 435 RDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQY 494

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F SM + + + P  +HY  M+D+  R+G  +EA+  + +MPF PD I W+++++SCR++ 
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N E  K AA+ L +++  ++ A Y+ +S+IYA  G+W +V+Q+++ MRE+G RK   +SW
Sbjct: 555 NEEIGKWAAESLLELDP-QNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSW 613

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ KSKV++F+A+D+  P +++I  ++E L  +M +EGY PD S  LHD ++  K++ L 
Sbjct: 614 IKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLN 673

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           +HSE+LAIAF L+  P G PI V+KNLR C DCH A K ISKI+ REI VRD+ RFH FK
Sbjct: 674 HHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFK 733

Query: 740 DGFCSCRDFW 749
           DG CSC DFW
Sbjct: 734 DGTCSCGDFW 743



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 267/520 (51%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  N+ S N ++S Y KSG+L+T +E+F+ M +R  VSW  LI GY       EA K +
Sbjct: 66  MPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTY 125

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG  + + +TF+T+L   S     +   Q+H  I+KFG+ + + + +SLVD Y K
Sbjct: 126 NSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAK 185

Query: 121 IRCLDLARRVFKE-------------------------------MPQKDSVSFNALITGF 149
           +  + +A +VF E                               M ++DS+S+  +ITG 
Sbjct: 186 MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGL 245

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  EA+ LF +M+  G     +TF + L+A  GL  +  G+++H  ++++ +  NV
Sbjct: 246 IQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV 305

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+Y K   V  A  +F  M   + VS+  M+  Y  N   +E++++F ++Q  
Sbjct: 306 FVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRN 365

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             +   F   +++S  AN   L+ G Q H Q +V+  IS + V+N+L+ +Y KCG  E++
Sbjct: 366 GIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDS 425

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F  +S    V WTA++S Y Q G   E ++LF  M    +  D  TF ++L A +  
Sbjct: 426 NQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRA 485

Query: 390 ASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G+Q   S +   G +      + ++D++ ++G L++A     +MP   + + W  
Sbjct: 486 GLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWAT 545

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C   G+ +    + E +++   Q P    LLS + A
Sbjct: 546 LLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYA 585


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/704 (37%), Positives = 400/704 (56%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NSL+  + K   L  AR VF EMP++D+VS+  ++ G  + G   EAIK  ++M   GF 
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------HDCV 225
           P+ FT    LS+       A+GR+VH+FVVK      V VAN++L++Y K         V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 226 VE-------------------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
            E                         A  LF  MP+   VS+N MI  Y  N    ++L
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           KLF R L  +     +F  +++LS  AN  +++IG+Q+H   + T      +V N+L+  
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 320 YAKCGR---------------------------------FEEAKEIFANLSHISTVPWTA 346
           YAK G                                   E A+E+F  +++   V WTA
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G  +EA++LF  M       +  T A++L   A LA L  GKQ+H   IRS 
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSF 465
              +    +A++ MYA+SGS   A + F ++  R   ++W ++I A AQ+G  +  +  F
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E+M+++G +PD ++ + VLSACSH G + EG +Y++ +  ++++ P+  HYA MVD+L R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G F EA++ + +MP EPD I W S++++CR+HKN E A+ AA++L  ++   ++  Y A
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP-NNSGAYSA 640

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  G+W   +++ KA +E+ VRK T +SW  ++SK+HVF A+D +HPQ + +   
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
              + +E+K  G+ PD    LHD D+E+K E L  HSE+LAIAF LI+TPE + + VMKN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCHAAIK ISK+T REI VRD++RFHHF+DG CSC+D+W
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 72/575 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +  +N  + N L+S + KSG LA AR +F  M +R AVSWT+++ G ++  +F EA K  
Sbjct: 93  LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +DM  DG + P   T   +LS C+         +VH+ ++K G  S + + NS+++ Y K
Sbjct: 153 LDMTADGFT-PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211

Query: 121 ---------------IRC----------------LDLARRVFKEMPQKDSVSFNALITGF 149
                          +R                 +DLA  +F+ MP +  VS+NA+I G+
Sbjct: 212 CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY 271

Query: 150 AKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + GL+ +A+KLF  M H     P +FT  + LSA   L ++ +G+QVHA++++T    N
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 209 VFVANALLDLYSKHDCVVEARK---------------------------------LFGEM 235
             V NAL+  Y+K   V  AR+                                 +FG M
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D V++  MI  Y  N +  E++ LFR +     + + +  + +LSV A+   L  G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           QIH + I +       V+N+++ MYA+ G F  A+ +F  +     T+ WT+MI A  Q 
Sbjct: 452 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  EEA+ LF EM RA +  D+ T+  +L A +    ++ GK+ +  +     ++   S 
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            A ++D+ A++G   +A +  + MP E + ++W +L+SAC  + +A+    + E ++   
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-- 629

Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
             P++    S ++   S CG   +  + + +  +K
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEK 664



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 210/452 (46%), Gaps = 66/452 (14%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NVF  N+LL +++K   + +AR +F EMPE D VS+ VM+       ++ E++K   ++ 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC---- 323
              F  +QF  + +LS  A      +GR++H+  +     S V VANS+++MY KC    
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216

Query: 324 ---------------------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
                                      GR + A+ +F ++   S V W AMI+ Y Q G 
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276

Query: 357 LEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIR----------- 404
             +AL LF  M   ++++ D+ T  S+L A A L ++ +GKQ+H++++R           
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 405 --------SGFMS--------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                   SG +               NV S +ALL+ Y K G ++ A + F  M  R++
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           V+W A+I    QNG     +  F  M+  G +P+S +L +VLS C+    ++ G Q  + 
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHC 455

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
              +  L        +++ +  RSG F  A ++  Q+ +  + I W+S+I +   H   E
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            A    +++ +     D   YV + +  + AG
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 237/533 (44%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N ++S     G +  A  LF SM DR+ VSW  +I GY+Q     +A KLF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSIL---------- 108
             M  +    PD  T  ++LS C+         QVHA I++    YNS +          
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344

Query: 109 ---------------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                I   +L++ Y KI  ++ AR +F  M  +D V++ A+I 
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G N+EAI LF  M   G +P+ +T AA LS    LA +  G+Q+H   +++   +
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 464

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +  V+NA++ +Y++      AR++F ++    + +++  MI   A + Q +E++ LF E+
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGR 325
                +  +  +  +LS  ++   +  G++ + Q      I+ E+     +VD+ A+ G 
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 584

Query: 326 FEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           F EA+E    +      + W +++SA                 CR             + 
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSA-----------------CR-------------VH 614

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
            +AELA L+  K L      SG      + SA+ ++Y+  G   DA + +K   E+ +  
Sbjct: 615 KNAELAELAAEKLLSIDPNNSG------AYSAIANVYSACGRWSDAARIWKARKEKAVRK 668

Query: 443 ---VSWNALISACAQNG---------DAQATL--KSFEDMVQSGYQPDSVSLL 481
               SW  + S     G         DA   +  + +E++  +G+ PD  S+L
Sbjct: 669 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 163/383 (42%), Gaps = 83/383 (21%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTI----------------------------------- 302
           ++ LL +     +   GR IH + +                                   
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 303 --VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             +  A   V   NSL+ M+AK GR  +A+ +FA +     V WT M+    + G   EA
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +   ++M     +  Q T  ++L + A   + ++G+++HSFV++ G  S V   +++L+M
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208

Query: 421 YAKSGSLKDAIQTFKE-------------------------------MPERNIVSWNALI 449
           Y K G  + A   F+                                MP+R+IVSWNA+I
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268

Query: 450 SACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           +   QNG     LK F  M+ +S   PD  ++ SVLSAC++ G +  G Q        Y 
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYI 323

Query: 509 LRPKKEHYASMVDIL----CRSGCFDEAEKLMAQ-MPFEPDEIMWSSVINSCRIHKNLEF 563
           LR +  + + + + L     +SG  + A ++M Q M  + + I +++++       ++E 
Sbjct: 324 LRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMES 383

Query: 564 AKKAADQLFKMEKLRDAAPYVAM 586
           A+    ++F +   RD   + AM
Sbjct: 384 AR----EMFGVMNNRDVVAWTAM 402


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/742 (36%), Positives = 425/742 (57%), Gaps = 5/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           N L+S Y K  ++  AR+LF+ M +R   VSW  +I  YS   Q  EA  LF +M+  G 
Sbjct: 49  NSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGV 108

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
               Y T    L  C +       +++HA I+K      + + N+LV  + +   +  A 
Sbjct: 109 GANTY-TLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAA 167

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           R+F E+ +KD++++N++I GF + GL  EA++ F  +Q    KP + +  + L+A   L 
Sbjct: 168 RIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLG 227

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+++HA+ +K     N+ + N L+D+YSK  CV  A  +F +M   D +S+  +I 
Sbjct: 228 YLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIA 287

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N  + E+LKL R++Q    D       + L   +    L   +++H  T+    +S
Sbjct: 288 AYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTL-KRGLS 346

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ + N ++D+YA CG    A  +F ++     V WT+MIS YV  G   EAL +F  M 
Sbjct: 347 DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMK 406

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             ++  D  T  SIL A+A L++L+ GK++H F+ R GFM    + ++L+DMYA  GSL+
Sbjct: 407 ETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLE 466

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A + F     +++V W  +I+A   +G  +A ++ F  M      PD ++ L++L ACS
Sbjct: 467 NAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACS 526

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GLI EG +   +M  KY+L P  EHYA +VD+L R+   +EA   +  M  EP   +W
Sbjct: 527 HSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVW 586

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            + + +CRIH N +  + AA +L  ++       YV +SN++A +G+W+ V +V+  M+ 
Sbjct: 587 CAFLGACRIHSNKKLGEIAAQKLLDLDP-DSPGSYVLISNVFAASGRWKDVEEVRMRMKG 645

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALH 667
            G++K    SW+E+ +KVH F   D+ HP++ +I +K+  + ++++KE GY P T   LH
Sbjct: 646 GGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLH 705

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           +  +E KV+ L  HSERLAIA+ L++T EG+PI + KNLR C DCH   KL+SK   RE+
Sbjct: 706 NVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFEREL 765

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD+SRFHHF+DG CSC DFW
Sbjct: 766 IVRDASRFHHFEDGVCSCGDFW 787



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 268/516 (51%), Gaps = 8/516 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   D  TF  +L  C   +  +   ++H  IIK GY+SI+ + NSLV  Y K   +  A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 128 RRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           R++F  M ++ D VS+N++I+ ++  G   EA+ LF EMQ  G   + +T  AAL A   
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            +   LG ++HA ++K+N V +V+VANAL+ ++ +   +  A ++F E+ E D +++N M
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +  N  Y E+L+ F  LQ       +    ++L+       L  G++IH   +    
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S +++ N+L+DMY+KC     A  +F  + +   + WT +I+AY Q     EAL L  +
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK 304

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           +    +  D     S L A + L  LS  K++H + ++ G +S++   + ++D+YA  G+
Sbjct: 305 VQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADCGN 363

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +  A + F+ +  +++VSW ++IS    NG A   L  F  M ++  +PDS++L+S+LSA
Sbjct: 364 INYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSA 423

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            +    + +G +    + +K     +     S+VD+    G  + A K+          +
Sbjct: 424 AASLSALNKGKEIHGFIFRK-GFMLEGSTVNSLVDMYACCGSLENAYKVFI-CTRSKSLV 481

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +W+++IN+  +H       KAA +LF + + +   P
Sbjct: 482 LWTTMINAYGMHGR----GKAAVELFSIMEDQKLIP 513



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 204/403 (50%), Gaps = 15/403 (3%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+ LG     FTF   L A   + DI  G ++H  ++K  +   VFVAN+L+ +Y+K + 
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 225 VVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
           ++ ARKLF  M E  D VS+N +I+ Y+ N Q  E+L LFRE+Q      + +     L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
              +    ++G +IH   + +  + +V VAN+LV M+ + G+   A  IF  L     + 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W +MI+ + Q G   EAL  F  +  AN+  D+ +  SIL AS  L  L  GK++H++ +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           ++   SN+  G+ L+DMY+K   +  A   F +M  ++++SW  +I+A AQN      LK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM---- 519
               +   G   D++ + S L ACS       GL+  +   + +    K+     M    
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKRGLSDLMMQNM 353

Query: 520 -VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            +D+    G  + A ++   +  + D + W+S+I SC +H  L
Sbjct: 354 IIDVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGL 394



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N L+  Y   G+L  A ++F     ++ V WT +I  Y    + + A +LF  M  D 
Sbjct: 451 TVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIME-DQ 509

Query: 68  GSDPDYVTFATLLSGCSEPDTANE 91
              PD++TF  LL  CS     NE
Sbjct: 510 KLIPDHITFLALLYACSHSGLINE 533


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/675 (38%), Positives = 387/675 (57%), Gaps = 34/675 (5%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L   N+L+ +    R LD    +F  M Q+D+VS+NA+I GF+  G +  A++L+  +  
Sbjct: 72  LFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLR 131

Query: 168 LG--FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
            G   +PS  T +A + A   L D ALGRQ H  +++  F  N FV + L+ +Y+K   +
Sbjct: 132 AGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLI 191

Query: 226 VEARKLFGEMPEVDGVSYNVMIT----------------------CYAW---------NE 254
            +A+++F EM   + V YN MIT                      C  W         N 
Sbjct: 192 GDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG 251

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              ++L  FR ++F      Q+ F ++L+       L+ G+QIH   I T     V V +
Sbjct: 252 LESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGS 311

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +LVDMY+KC   + A+  F  +S  + + WTA+I  Y Q G  EEA+ +F EM R  I  
Sbjct: 312 ALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  S++ + A LASL  G Q H   + SG M  +   +AL+ +Y K GS++DA + F
Sbjct: 372 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EM   + VSW AL++  AQ G A+ T+  FE M+    +PD V+ + VLSACS  G +E
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE 491

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +G  YF+SM + + + P  +HY  M+D+  RSG   EAE+ + QMP  PD I W +++++
Sbjct: 492 KGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR+  ++E  + AA+ L +++  ++ A YV + +++A  G W  V+Q+++ MR+R V+K 
Sbjct: 552 CRLRGDMEIGQWAAENLLEIDP-QNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              SW++ K+KVH+F+A+D+ HP +  I  K+E L  +M +EGYKPD S  LHD  +  K
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
           V  + +HSE+LAIAF L+  P   PI ++KNLR C DCH A KLISKITGR+I VRD+ R
Sbjct: 671 VHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVR 730

Query: 735 FHHFKDGFCSCRDFW 749
           FH F +G CSC DFW
Sbjct: 731 FHKFSNGVCSCGDFW 745



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 249/520 (47%), Gaps = 35/520 (6%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+ N  + N L+S    +  L     LF SM  R  VS+  +I G+S       A +L+ 
Sbjct: 68  PHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYH 127

Query: 62  DMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +   G S  P  +T + ++   S         Q H  I++ G+     + + LV  Y K
Sbjct: 128 TLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAK 187

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALI-------------------------------TGF 149
           +  +  A+RVF EM  K+ V +N +I                               TGF
Sbjct: 188 MGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGF 247

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  +A+  F  M+  G     +TF + L+A   L+ +  G+Q+HA++++T++ +NV
Sbjct: 248 TQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNV 307

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+YSK   +  A   F  M   + +S+  +I  Y  N   +E++++F E+Q  
Sbjct: 308 FVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             D   F   +++S  AN   L+ G Q H   +V+  +  + V+N+LV +Y KCG  E+A
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +     V WTA+++ Y Q G  +E ++LF +M   ++  D  TF  +L A +  
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRA 487

Query: 390 ASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G    HS     G +      + ++D+Y++SG LK+A +  K+MP   + + W  
Sbjct: 488 GFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGT 547

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+SAC   GD +    + E++++   Q P S  LL  + A
Sbjct: 548 LLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHA 587



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N V  N +I+G ++   +  AR LF  M DR  ++WT ++ G++Q     +A   F
Sbjct: 201 MDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFF 260

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR  G +   Y TF ++L+ C       +  Q+HA II+  Y+  + + ++LVD Y K
Sbjct: 261 RRMRFQGIAIDQY-TFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSK 319

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +  A   F+ M  K+ +S+ ALI G+ + G +EEA+++F EMQ  G  P DFT  + 
Sbjct: 320 CRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSV 379

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G Q H   + +  +  + V+NAL+ LY K   + +A +LF EM   D 
Sbjct: 380 ISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQ 439

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHT 299
           VS+  ++T YA   + KE++ LF ++           F  +LS  +    ++ G    H+
Sbjct: 440 VSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHS 499

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                  +        ++D+Y++ GR +EA+E    +  H   + W  ++SA   +G++E
Sbjct: 500 MQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 213/481 (44%), Gaps = 80/481 (16%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEAR 229
           +P    +AA LSA       A G  +H  +++T        + N LL  Y K      AR
Sbjct: 3   RPLSSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61

Query: 230 KLFGEMP-------------------------------EVDGVSYNVMITCYAWNEQYKE 258
           ++F   P                               + D VSYN +I  ++    +  
Sbjct: 62  RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121

Query: 259 SLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           +++L+  L    +    S+   S ++   +   D  +GRQ H Q +         V + L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181

Query: 317 VDMYAK-------------------------------CGRFEEAKEIFANLSHISTVPWT 345
           V MYAK                               C   EEA+ +F  ++    + WT
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWT 241

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            M++ + Q G   +ALN F  M    I+ DQ TF SIL A   L++L  GKQ+H+++IR+
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
            +  NVF GSAL+DMY+K  S+K A   F+ M  +NI+SW ALI    QNG ++  ++ F
Sbjct: 302 HYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVF 361

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS----MVD 521
            +M + G  PD  +L SV+S+C++   +EEG Q+         L     HY +    +V 
Sbjct: 362 SEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF-----HCLALVSGLMHYITVSNALVT 416

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +  + G  ++A +L  +M F  D++ W++++     +     AK+  D LF+    +D  
Sbjct: 417 LYGKCGSIEDAHRLFDEMLFH-DQVSWTALVTG---YAQFGRAKETID-LFEKMLAKDVK 471

Query: 582 P 582
           P
Sbjct: 472 P 472



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 95/204 (46%), Gaps = 8/204 (3%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+F+ +ALL   A +  L D    F  M +R+ VS+NA+I+  +  G     ++ +  ++
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 470 QSG--YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           ++G   +P  +++ +++ A S  G    G Q F+    +          + +V +  + G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQ-FHCQILRLGFGVNAFVGSPLVGMYAKMG 189

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
              +A+++  +M  + + +M++++I      K +E A++    LF++   RD   +  M 
Sbjct: 190 LIGDAKRVFDEMDGK-NVVMYNTMITGLLRCKMVEEARR----LFEVMTDRDCITWTTMV 244

Query: 588 NIYAVAGQWESVSQVKKAMRERGV 611
             +   G         + MR +G+
Sbjct: 245 TGFTQNGLESQALNFFRRMRFQGI 268


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/758 (35%), Positives = 416/758 (54%), Gaps = 106/758 (13%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLD----------------------------- 125
           VH +II FG+     I N L+D YCK   LD                             
Sbjct: 36  VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 126 --LARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             LAR VF+E P   +D+V +NA+ITGF+       AI LF +M+H GFKP DFT+A+ L
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155

Query: 182 SAGVGLA--DIALGRQVHAFVVKTNFVENVFVANALLDLYSK----HDCVVEARKLFGEM 235
            AG+ L   D     Q HA  +K+       V+NAL+ +YS+       +  ARK+F ++
Sbjct: 156 -AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDI 214

Query: 236 PEVDG--------------------------------VSYNVMITCYAWNEQYKESLKLF 263
           PE D                                 V+YN MI+ Y     Y+E+L++ 
Sbjct: 215 PEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMV 274

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           R +  +  +  +F + +++   AN   LQ+G+Q+H   +     S     NSLV +Y KC
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNSLVTLYYKC 333

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL-------------------------- 357
           G+F EA+ IF  +     V W A++S YV  G++                          
Sbjct: 334 GKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393

Query: 358 -----EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
                EE L LF  M R         F+  +++ A L +   G+Q H+ +++ GF S++ 
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLS 453

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
           +G+AL+ MYAK G +++A Q F+ MP  + VSWNALI+A  Q+G     +  +E+M++ G
Sbjct: 454 AGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKG 513

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +PD ++ L+VL+ACSH GL+++G +YFNSM   Y++ P  +HYA ++D+LCRSG F EA
Sbjct: 514 IRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEA 573

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
           E ++  +PF+P   +W ++++ CR+H N+E    AAD+LF +    D   Y+ +SN+YA 
Sbjct: 574 ESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT-YMLLSNMYAA 632

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
            GQWE V++V+K MR+RGV+K  A SW+E++++VH F  +D  HP+   + + +++L +E
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKE 692

Query: 653 MKKEGYKPDTSCALHD-EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           M++ GY PDTS  LHD E +  K + L  HSE++A+AF L+  P G+ I + KNLR C D
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH   + +SK+  R+I +RD  RFHHF++G CSC +FW
Sbjct: 753 CHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 244/529 (46%), Gaps = 78/529 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + ++   ++SGY  SG++A AR +F    +  R  V +  +I G+S  N    A  LF  
Sbjct: 79  DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 63  MRTDGGSDPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M+ + G  PD  T+A++L+G +   D   + +Q HA  +K G   +  + N+LV  Y   
Sbjct: 139 MKHE-GFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYS-- 195

Query: 122 RC------LDLARRVFKEMPQKDS--------------------------------VSFN 143
           RC      L  AR+VF ++P+KD                                 V++N
Sbjct: 196 RCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYN 255

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           A+I+G+   GL +EA+++   M   G +  +FT+ + + A      + LG+QVHA+V++ 
Sbjct: 256 AMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR 315

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN------------------- 244
                 F  N+L+ LY K     EAR +F +MP  D VS+N                   
Sbjct: 316 EDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374

Query: 245 ------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
                       +MI+  A N   +E LKLF  ++   F+   + FS  +   A      
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
            G+Q H Q +     S +   N+L+ MYAKCG  EEA+++F  +  + +V W A+I+A  
Sbjct: 435 NGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALG 494

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNV 411
           Q G+  EA++++ EM +  I  D+ TF ++L A +    +  G++  +S           
Sbjct: 495 QHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGA 554

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
              + L+D+  +SG   +A    + +P +     W AL+S C  +G+ +
Sbjct: 555 DHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME 603



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 234/542 (43%), Gaps = 94/542 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA-VSWTILIGGYSQKNQFREAFKL 59
           +P ++  S   +++GYVK+G     +EL   M +    V++  +I GY     ++EA ++
Sbjct: 214 IPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEM 273

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVD 116
              M    G + D  T+ +++  C+         QVHA +++   F ++      NSLV 
Sbjct: 274 VRRM-VSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFH----FDNSLVT 328

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGF--------------------------- 149
            Y K    + AR +F++MP KD VS+NAL++G+                           
Sbjct: 329 LYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388

Query: 150 ----AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
               A+ G  EE +KLF  M+  GF+P D+ F+ A+ +   L     G+Q HA +VK  F
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF 448

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             ++   NAL+ +Y+K   V EA+++F  MP +D VS+N +I     +    E++ ++ E
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEE 508

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKCG 324
           +        +  F T+L+  ++   +  GR+  ++   V            L+D+  + G
Sbjct: 509 MLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSG 568

Query: 325 RFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           +F EA+ I  +L    T   W A++S     GN+E  +          I+AD+  F  I 
Sbjct: 569 KFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGI----------IAADK-LFGLIP 617

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI- 442
                   LS                         +MYA +G  ++  +  K M +R + 
Sbjct: 618 EHDGTYMLLS-------------------------NMYAATGQWEEVARVRKLMRDRGVK 652

Query: 443 ----VSW-------NALISACAQNGDAQATLKSFED----MVQSGYQPDSVSLLSVLSAC 487
                SW       +  +     + +A+A  K  +D    M + GY PD+  +L  + + 
Sbjct: 653 KEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESD 712

Query: 488 SH 489
            H
Sbjct: 713 GH 714



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 198/469 (42%), Gaps = 102/469 (21%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS------- 242
           + L R VH  ++   F  +  + N L+D+Y K   +  AR+LF E+ E D ++       
Sbjct: 30  LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSG 89

Query: 243 --------------------------YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
                                     YN MIT ++ N     ++ LF +++   F    F
Sbjct: 90  YCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDF 149

Query: 277 PFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKC------------ 323
            ++++L+ +A  +D +    Q H   + + A     V+N+LV +Y++C            
Sbjct: 150 TYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARK 209

Query: 324 -----------------------GRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
                                  G F+  KE+   +  ++  V + AMIS YV  G  +E
Sbjct: 210 VFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQE 269

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS---------- 409
           AL +   M  + I  D+ T+ S++RA A    L LGKQ+H++V+R    S          
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTL 329

Query: 410 --------------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
                               ++ S +ALL  Y  SG + +A   FKEM E+NI+SW  +I
Sbjct: 330 YYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           S  A+NG  +  LK F  M + G++P   +    + +C+  G    G Q F++   K   
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG-QQFHAQLVKIGF 448

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                   +++ +  + G  +EA+++   MP   D + W+++I +   H
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQH 496



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 83/348 (23%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L +   +  LQ+ R +H   I         + N L+D+Y K    + A+++F  +S    
Sbjct: 21  LCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDK 80

Query: 342 VPWTAMISAYVQKGNL-------EE--------------------------ALNLFIEMC 368
           +  T M+S Y   G++       EE                          A+NLF +M 
Sbjct: 81  IARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140

Query: 369 RANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS- 426
                 D  T+AS+L   A +        Q H+  ++SG        +AL+ +Y++  S 
Sbjct: 141 HEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASS 200

Query: 427 ---LKDAIQTFKEMPERN--------------------------------IVSWNALISA 451
              L  A + F ++PE++                                +V++NA+IS 
Sbjct: 201 PSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
               G  Q  L+    MV SG + D  +  SV+ AC++  L++ G Q        Y LR 
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ-----VHAYVLR- 314

Query: 512 KKEHYA-----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +E ++     S+V +  + G F+EA  +  +MP + D + W+++++ 
Sbjct: 315 -REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSG 360



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 67/284 (23%)

Query: 379 FASILRASAEL--ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +A+ LR    L   SL L + +H  +I  GF  +    + L+D+Y KS  L  A Q F E
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74

Query: 437 MPE---------------------------------RNIVSWNALISACAQNGDAQATLK 463
           + E                                 R+ V +NA+I+  + N D  + + 
Sbjct: 75  ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGLQYFNSMTQKYKLRP 511
            F  M   G++PD  +  SVL+  +            H   ++ G  Y  S++       
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSN------ 188

Query: 512 KKEHYASMVDILCRSGC----FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
                 ++V +  R          A K+   +P E DE  W++++     +   +  K  
Sbjct: 189 ------ALVSVYSRCASSPSLLHSARKVFDDIP-EKDERSWTTMMTGYVKNGCFDLGK-- 239

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
            + L  M++      Y AM + Y   G ++   ++ + M   G+
Sbjct: 240 -ELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGI 282


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/741 (36%), Positives = 424/741 (57%), Gaps = 11/741 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ G+L  A  +F  M +R   SW +L+GGY++   F EA  L+  M   G  
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG-I 191

Query: 70  DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL-- 126
            PD  TF  +L  C   PD A    +VH  +I++G+ S + + N+L+  Y  ++C D+  
Sbjct: 192 RPDVYTFPCVLRTCGGLPDLARGR-EVHLHVIRYGFESDVDVVNALITMY--VKCGDIFS 248

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP++D +S+NA+I+G+ +  +  E ++LF  M+     P   T  + +SA   
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D  LGR+VH +V+KT FV  V V N+L+ ++S   C  EA  +F +M   D VS+  M
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y  N   +++++ +  ++       +   +++LS  A    L  G  +H     T  
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGL 428

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S V VANSL+DMY+KC   ++A E+F  + + + + WT++I          EAL  F +
Sbjct: 429 TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQ 488

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M   ++  +  T  S+L A A + +LS GK++H+  +R+G   + F  +ALLDMY + G 
Sbjct: 489 MI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGR 547

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ A   F    E+++ SWN L++  AQ G     ++ F  M++S   PD ++  S+L A
Sbjct: 548 MEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCA 606

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS  G++ +GL+YF SM  K+ + P  +HYAS+VD+L R+G  ++A + + +MP +PD  
Sbjct: 607 CSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPA 666

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++N+CRI++N+E  + AA  +F+M+  +    Y+ + N+YA +G+W+ V++V+K M
Sbjct: 667 IWGALLNACRIYQNVELGELAAQHIFEMDT-KSVGYYILLCNLYADSGKWDEVARVRKIM 725

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           RE  +      SWVE+  +VH F   D+ HPQ  EI   +E   ++M+  G         
Sbjct: 726 RENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRR 785

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D D   K E    HSERLAIAF LINT  G+PI V KNL  C +CH  +K ISK+  R 
Sbjct: 786 DDIDAS-KAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRG 844

Query: 727 ITVRDSSRFHHFKDGFCSCRD 747
           I+VRD+ +FHHFKDG CSC D
Sbjct: 845 ISVRDTEQFHHFKDGVCSCGD 865



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 213/420 (50%), Gaps = 10/420 (2%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N+LI     +G  E+A+     MQ L     + T+ A L         + G +VH++V K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T     V + NALL ++ +   +VEA  +FG+M E D  S+NV++  YA    + E+L L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           +  + +       + F  +L       DL  GR++H   I     S+V V N+L+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG    A+ +F  +     + W AMIS Y +     E L LF  M    +  D  T  S+
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           + A   L    LG+++H +VI++GF++ V   ++L+ M++  G   +A   F +M  +++
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDL 362

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSW A+IS   +NG  +  ++++  M   G  PD +++ SVLSAC+  GL+++G+     
Sbjct: 363 VSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI----- 417

Query: 503 MTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           M  ++  R     Y     S++D+  +  C D+A ++  ++P   + I W+S+I   R++
Sbjct: 418 MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLN 476



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
           N S I+     ++I     KG+LE+AL     M    +S ++ T+ ++LR      + S 
Sbjct: 53  NPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G ++HS+V ++     V  G+ALL M+ + G L +A   F +M ER++ SWN L+   A+
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
            G     L  +  M+  G +PD  +   VL  C     +  G +  +    +Y      +
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGRE-VHLHVIRYGFESDVD 231

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              +++ +  + G    A  +  +MP   D I W+++I+ 
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            +  N LI  Y K   +  A E+F+ + ++  +SWT +I G     +  EA   F  M  
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                P+ VT  ++LS C+     +   ++HA  ++ G      + N+L+D Y +   ++
Sbjct: 492 S--LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            A   F    +KD  S+N L+TG+A++G    A++LF +M      P + TF + L A
Sbjct: 550 PAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCA 606


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/743 (36%), Positives = 424/743 (57%), Gaps = 54/743 (7%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           LFN++    A++W  +I  Y+      ++   F+ M   G   PD+  F ++L  C+   
Sbjct: 64  LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASG-LYPDHNVFPSVLKACAMLM 122

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR-------VFKEMPQKD-S 139
             N    +H  II+ G +  L   N+L++ Y K+R L  + R       V  EM ++  S
Sbjct: 123 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRS 182

Query: 140 VSFNALITGFAKEGLNEEAIKLF------------VEMQHLGFKP-SDFTFAAALSAGVG 186
           V   +++ G   +G     I+ F             ++  + +KP S++    A + G  
Sbjct: 183 VRTASVLVG--NQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQ 240

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           + DI+     H+  V +                         RK+F  MPE D VS+N +
Sbjct: 241 IKDIS-----HSMSVDS------------------------VRKIFEMMPEKDLVSWNTI 271

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I   A N  Y E+L + RE+         F  S++L ++A  +D+  G++IH  +I    
Sbjct: 272 IAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGL 331

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            +EV VA+SL+DMYAKC R  ++  +F  L+    + W ++I+  VQ G  +E L  F +
Sbjct: 332 DAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQ 391

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  A I     +F+SI+ A A L +L LGKQLH ++ R+GF  N+F  S+L+DMYAK G+
Sbjct: 392 MLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGN 451

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ A Q F  M  R++VSW A+I  CA +G A   ++ FE M   G +P+ V+ ++VL+A
Sbjct: 452 IRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTA 511

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL++E  +YFNSMT  + + P  EHYA++ D+L R+G  +EA   +  MP  P   
Sbjct: 512 CSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGS 571

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W++++++CR+HKN++ A+K A+++ +++  ++   Y+ ++NIY+ A +W+  ++ + ++
Sbjct: 572 VWATLLSACRVHKNVDMAEKVANRILEVDP-KNTGAYILLANIYSAARRWKEAAKWRASL 630

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           R  G+RK  A SW+E+++KV+ F A DE HP   +IR  +E LM+ M+KEGY PDTS   
Sbjct: 631 RRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVH 690

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD +EE K   +  HSERLAI F +INTP G+ I V KNLR CTDCH A K ISKI GRE
Sbjct: 691 HDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGRE 750

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD+SRFHHFK+G CSC D+W
Sbjct: 751 IVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 230/507 (45%), Gaps = 46/507 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA ++KF  +S+  + + L+  Y  I  L  + R+F  +    ++++ ++I  +   G
Sbjct: 29  QLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHG 87

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  +++  F+ M   G  P    F + L A   L D+ LG  +H ++++     +++  N
Sbjct: 88  LPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGN 147

Query: 214 ALLDLYSKHDCVVEA-RKLFGEMPEVDGVSYNV----MITCYAWNEQYKES-LKLF---- 263
           AL+++YSK   + ++ R+  G    +D ++         +    N+  K S ++ F    
Sbjct: 148 ALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDV 207

Query: 264 ----RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
               RE +    +    P S    + A  L  QI    H+ ++                 
Sbjct: 208 SCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSV----------------- 250

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
                  +  ++IF  +     V W  +I+   + G   E L +  EM  AN+  D  T 
Sbjct: 251 -------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTL 303

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           +S+L   AE   +S GK++H   IR G  + V+  S+L+DMYAK   + D+ + F  + E
Sbjct: 304 SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE 363

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           R+ +SWN++I+ C QNG     LK F  M+ +  +P S S  S++ AC+H   +  G Q 
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 423

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
              +T+           +S+VD+  + G    A ++  +M    D + W+++I  C +H 
Sbjct: 424 HGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHG 481

Query: 560 NLEFAKKAADQLFKMEKLRDAAP-YVA 585
           +       A +LF+  K     P YVA
Sbjct: 482 H----ALDAIELFEQMKTEGIEPNYVA 504



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 190/364 (52%), Gaps = 12/364 (3%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTF 76
           S ++ + R++F  M ++  VSW  +I G ++   + E   +  +M   GG++  PD  T 
Sbjct: 247 SMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM---GGANLKPDSFTL 303

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK-IRCLDLARRVFKEMP 135
           +++L   +E    ++  ++H   I+ G ++ + + +SL+D Y K  R +D + RVF  + 
Sbjct: 304 SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVD-SYRVFTLLT 362

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           ++D +S+N++I G  + GL +E +K F +M     KP  ++F++ + A   L  + LG+Q
Sbjct: 363 ERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 422

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H ++ +  F EN+F+A++L+D+Y+K   +  AR++F  M   D VS+  MI   A +  
Sbjct: 423 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGH 482

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHTQTIVTTAISEVKVAN 314
             ++++LF +++    + +   F  +L+  ++  L  +  +  ++ T+       V+   
Sbjct: 483 ALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYA 542

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNL---EEALNLFIEMCRA 370
           ++ D+  + GR EEA +    +    T   W  ++SA     N+   E+  N  +E+   
Sbjct: 543 AVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPK 602

Query: 371 NISA 374
           N  A
Sbjct: 603 NTGA 606



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 4/227 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +  +  +F  + +R  +SW  +I G  Q   F E  K F  M       P
Sbjct: 341 LIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLM-AKIKP 399

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              +F++++  C+   T +   Q+H  I + G++  + I +SLVD Y K   +  AR++F
Sbjct: 400 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIF 459

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
             M  +D VS+ A+I G A  G   +AI+LF +M+  G +P+   F A L+A    GL D
Sbjct: 460 DRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVD 519

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            A  +  ++  +       V    A+ DL  +   + EA      MP
Sbjct: 520 EAW-KYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMP 565



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 29/296 (9%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           +Y+      ++  +F  L     + W ++I  Y   G   ++L  FI M  + +  D   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK-------DAI 431
           F S+L+A A L  L+LG+ LH ++IR G   ++++G+AL++MY+K   LK        A 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 432 QTFKEMPERNIVSWNALISACAQ----------NGDAQATLKSFEDMV-QSGYQPDSVSL 480
           Q   EM ER      A +    Q          N D     + FE  V +  Y+P S   
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSE-- 228

Query: 481 LSVLSACSHCGLIEEGLQYF--NSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLM 536
              + AC+    I++       +S+ + +++ P+K+   + +++    R+G + E   ++
Sbjct: 229 YREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMV 288

Query: 537 AQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            +M     +PD    SSV+    I +N++ +K        + +  DA  YVA S I
Sbjct: 289 REMGGANLKPDSFTLSSVLP--LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    + L+  Y K GN+ TAR++F+ M  R  VSWT +I G +      +A +LF  
Sbjct: 433 DENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQ 492

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M+T+ G +P+YV F  +L+ CS     +E
Sbjct: 493 MKTE-GIEPNYVAFMAVLTACSHAGLVDE 520



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAI 431
           ++ +A   S+LR    + S S  +QLH+ V++  F + ++ + S LL +Y+    L D++
Sbjct: 5   TSTEALVNSLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSL 62

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           + F  +     ++W ++I     +G    +L SF  M+ SG  PD     SVL AC+
Sbjct: 63  RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/757 (35%), Positives = 451/757 (59%), Gaps = 15/757 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +T+  N LI+ Y KS +  TA  +F SM +  R  VS++ +I  ++      +A ++F  
Sbjct: 86  DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSY--- 118
           +    G  P+   F  ++  C +       + +   ++K GY +S + +   L+D +   
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTF 177
           C +  L+ AR+VF +M +K+ V++  +IT  A+ G N+EAI LF+EM    G+ P  FT 
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
              +S    +  ++LG+++H++V+++  V ++ V  +L+D+Y+K   V EARK+F  M E
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325

Query: 238 VDGVSYNVMITCY--AWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIG 294
            + +S+  ++  Y        +E++++F  +        + F FS +L   A+  D   G
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
            Q+H QTI     +   V N LV +YAK GR E A++ F  L   + V  T +    V+ 
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445

Query: 355 GNL--EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
            NL  E+ L+  +E   + +S+   T+AS+L  +A + ++  G+Q+H+ V++ GF +++ 
Sbjct: 446 FNLNSEQDLDREVEYVGSGVSS--FTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             +AL+ MY+K G+ + A+Q F +M + N+++W ++I+  A++G A   L+ F +M+++G
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG 563

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+ ++VLSACSH GLI+E  ++F SM   + + P+ EHYA MVD+L RSG   EA
Sbjct: 564 VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEA 623

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            + +  MPF+ D ++W + + SCR+H+N +  + AA  + + E   D A Y+ +SN+YA 
Sbjct: 624 IEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREP-HDPATYILLSNLYAT 682

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
            G+WE V+ ++K M+++ + K    SW+E++++VH F   D LHP+  +I  K++ L  +
Sbjct: 683 EGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALK 742

Query: 653 MKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
           +K  GY P+T   LHD ++E K + L  HSE+LA+AFALI+TP   PI V KNLR C DC
Sbjct: 743 IKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDC 802

Query: 713 HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           H AIK IS ++GREI VRD++RFHH KDG CSC D+W
Sbjct: 803 HTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 181/354 (51%), Gaps = 12/354 (3%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM--PEVDGVSYNVMITC 249
           LG+ +H  +  +N   +  + N+L+ LYSK +  + A  +F  M   + D VSY+ +I+C
Sbjct: 70  LGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISC 129

Query: 250 YAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI- 307
           +A N    +++++F +L        +++ F+ ++         + G  +    + T    
Sbjct: 130 FANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFD 189

Query: 308 SEVKVANSLVDMYAK---CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
           S V V   L+DM+ K       E A+++F  +   + V WT MI+   Q G  +EA++LF
Sbjct: 190 SHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLF 249

Query: 365 IEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           +EM   +    D+ T   ++   AE+  LSLGK+LHS+VIRSG + ++  G +L+DMYAK
Sbjct: 250 LEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAK 309

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA--QATLKSFEDM-VQSGYQPDSVSL 480
            G +++A + F  M E N++SW AL++   + G    +  ++ F +M +Q G  P+  + 
Sbjct: 310 CGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTF 369

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
             VL AC+     + G Q  +  T K  L         +V +  +SG  + A K
Sbjct: 370 SGVLKACASLPDFDFGEQ-VHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 166/382 (43%), Gaps = 54/382 (14%)

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-- 336
           S LL       +  +G+ +H +   +    +  + NSL+ +Y+K      A  IF ++  
Sbjct: 56  SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIE-MCRANISADQATFASILRASAELASLSLG 395
           S    V ++++IS +    N  +A+ +F + + +  +  ++  F +++RA  +      G
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTG 175

Query: 396 KQLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKD---AIQTFKEMPERNIVSWNALISA 451
             L  FV+++G+  S+V  G  L+DM+ K  SL D   A + F +M E+N+V+W  +I+ 
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235

Query: 452 CAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSH--------------------- 489
            AQ G     +  F +M V SGY PD  +L  ++S C+                      
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295

Query: 490 --------------CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE-- 533
                         CGL++E  + F+ M +   +      + ++V+   R G   E E  
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMS-----WTALVNGYVRGGGGYEREAM 350

Query: 534 ----KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
                ++ Q    P+   +S V+ +C    + +F ++   Q  K+           + ++
Sbjct: 351 RMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSV 410

Query: 590 YAVAGQWESVSQVKKAMRERGV 611
           YA +G+ ES  +    + E+ +
Sbjct: 411 YAKSGRMESARKCFDVLFEKNL 432



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 41/280 (14%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T + +L+      +  LGK LH  +  S    +    ++L+ +Y+KS     A   F+ M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 438 --PERNIVSWNALISACAQNGDAQATLKSFED-MVQSGYQPDSVSLLSVLSACSHCGLIE 494
              +R++VS++++IS  A N +    ++ F+  ++Q G  P+     +V+ AC   G  +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 495 EGL---------QYFNS----------MTQKY--------------KLRPKK-EHYASMV 520
            GL          YF+S          M  K               K+R K    +  M+
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233

Query: 521 DILCRSGCFDEAEKLMAQM----PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             L + G  DEA  L  +M     + PD    + +I+ C   + L   K+    + +   
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           + D     ++ ++YA  G  +   +V   MRE  V   TA
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/740 (36%), Positives = 421/740 (56%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K G++    E+F  M  +  V+WT L+ G +      E   LF  MR +G   P
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG-IWP 199

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA++LS  +     +   +VHA  +KFG  S + +CNSL++ Y K   ++ A+ VF
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +D VS+N L+ G        EA++LF E +    K +  T+A  +     L  +A
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG-EMPEVDGVSYNVMITCY 250
           L RQ+H+ V+K  F     V  AL D YSK   + +A  +F       + VS+  +I+  
Sbjct: 320 LARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     ++ LF  ++  R   ++F +S +L    + L      QIH Q I T      
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIP 435

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+  Y+K G  E+A  IF  +     V W+AM+S + Q G+ E A  LF +M   
Sbjct: 436 SVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQ 495

Query: 371 NISADQATFASILRASA-ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I  ++ T +S++ A A   A +  G+Q H+  I+  +   +   SAL+ MY++ G++  
Sbjct: 496 GIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDS 555

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+   +R++VSWN++IS  AQ+G +   +++F  M  SG Q D V+ L+V+  C+H
Sbjct: 556 AQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+ EG QYF+SM + +K+ P  EHYA MVD+  R+G  DE   L+  MPF    ++W 
Sbjct: 616 NGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWR 675

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HKN+E  K +AD+L  +E   D++ YV +SNIYA AG+W+   +V+K M  R
Sbjct: 676 TLLGACRVHKNVELGKFSADKLLSLEP-HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+++K+KVH F A D+ HP +++I +K++ ++  +K++GY P+TS  LHD 
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDI 794

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E+ K   L  HSERLA+AF LI TP G+P+ ++KNLR C DCH  +K++S I  REI +
Sbjct: 795 AEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIM 854

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD SRFHHF  G CSC DFW
Sbjct: 855 RDCSRFHHFNGGACSCGDFW 874



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 284/534 (53%), Gaps = 17/534 (3%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC-SEPDTA-NELIQVHADIIKFGY 104
           Y+++    E    F   R  GG   D  T + +L  C S PD    E  Q+H   +K G+
Sbjct: 74  YARRGMVPEVLDQFSVARR-GGVLVDSATLSCVLKACRSVPDRVLGE--QLHCLCVKCGH 130

Query: 105 NSILIICN-SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV 163
           +   +    SLVD Y K   +     VF+ MP+K+ V++ +L+TG A   ++ E + LF 
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
            M+  G  P+ FTFA+ LSA      + LG++VHA  VK     +VFV N+L+++Y+K  
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            V +A+ +F  M   D VS+N ++     NE   E+L+LF E + T    +Q  ++T++ 
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTV 342
           + AN   L + RQ+H+  +         V  +L D Y+KCG   +A  IF+      + V
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVV 370

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WTA+IS  +Q G++  A+ LF  M    +  ++ T++++L+AS  +    L  Q+H+ V
Sbjct: 371 SWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQV 426

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I++ +      G+ALL  Y+K GS +DA+  FK + ++++V+W+A++S  AQ GD +   
Sbjct: 427 IKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACS-HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
             F  M   G +P+  ++ SV+ AC+     +++G Q F++++ KY+        +++V 
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVS 545

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           +  R G  D A+ ++ +   + D + W+S+I+    H    ++ KA +   +ME
Sbjct: 546 MYSRKGNIDSAQ-IVFERQTDRDLVSWNSMISGYAQHG---YSMKAIETFRQME 595



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 217/447 (48%), Gaps = 9/447 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +  A+ +FN M  R  VSW  L+ G        EA +LF + R   G 
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGK 299

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                T+AT++  C+         Q+H+ ++K G++    +  +L D+Y K   L  A  
Sbjct: 300 MTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358

Query: 130 VFK-EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F      ++ VS+ A+I+G  + G    A+ LF  M+     P++FT++A L A + + 
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI- 417

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              L  Q+HA V+KTN+     V  ALL  YSK     +A  +F  + + D V+++ M++
Sbjct: 418 ---LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA-NKLDLQIGRQIHTQTIVTTAI 307
           C+A     + +  LF ++       ++F  S+++   A     +  GRQ H  +I     
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V+++LV MY++ G  + A+ +F   +    V W +MIS Y Q G   +A+  F +M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGS 426
             + I  D  TF +++        +  G+Q    ++R   ++      A ++D+Y+++G 
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L + +   ++MP     + W  L+ AC
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGAC 681



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L+S Y + GN+ +A+ +F    DR  VSW  +I GY+Q     +A + F  M    G
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEAS-G 598

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLA 127
              D VTF  ++ GC+      E  Q    +++    N  +     +VD Y +   LD  
Sbjct: 599 IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDET 658

Query: 128 RRVFKEMP 135
             + ++MP
Sbjct: 659 MSLIRDMP 666


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/684 (39%), Positives = 406/684 (59%), Gaps = 23/684 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L S C     A +  Q  +D   F +N+I       + +Y K     +A ++F ++P
Sbjct: 49  FILLYSKCGRLAWARKAFQDISDPNVFSFNAI-------IAAYAKESRPLIAHQLFDQIP 101

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           + D VS+N LI+ +A  G    A+ LF  M+ +G     FT +A ++A     D+ L  Q
Sbjct: 102 EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD--DVGLIGQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNE 254
           +H+  V + F   V V NALL  Y K+  + +A+++F  M  + D VS+N MI  Y  ++
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ++L LF+E+     +   F  +++L+      DL  G Q H Q I T       V +
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279

Query: 315 SLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGN-LEEALNLFIEMCRANI 372
            L+D+Y+KCG    + +++F  ++    V W  M+S Y Q    LE+AL  F +M     
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAI 431
             +  +F  ++ A + L+S S GKQ+HS  ++S   SN  S  +AL+ MY+K G+L+DA 
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M E N VS N++I+  AQ+G    +L  F+ M++    P S++ +SVLSAC+H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +EEG  YFN M +K+ + P+ EHY+ M+D+L R+G   EAE L+A+MPF P  I W+S+
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR H N+E A KAA+Q+ ++E   +AAPYV +SN+YA AG+WE V+ V+K MR+RGV
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEP-SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED- 670
           +K    SW+E+K ++HVF A D  HP   EI   +E +  +MK+ GY PD   AL  +D 
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638

Query: 671 -----EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
                +EI+   L +HSE+LA+AF LI+T +G P+LV+KNLR C DCH AIK IS I GR
Sbjct: 639 TRGGEKEIR---LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGR 695

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EITVRD+ RFH FK+G CSC D+W
Sbjct: 696 EITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 252/491 (51%), Gaps = 11/491 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N  S N +I+ Y K      A +LF+ + +   VS+  LI  Y+   +   A  LF
Sbjct: 69  ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR + G D D  T + +++ C   D    + Q+H+  +  G++S + + N+L+  Y K
Sbjct: 129 SGMR-EMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185

Query: 121 IRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
              LD A+RVF  M   +D VS+N++I  + +     +A+ LF EM   G     FT A+
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLAS 245

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEV 238
            L+A   L D++ G Q H  ++KT F +N  V + L+DLYSK    + + RK+F E+ E 
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305

Query: 239 DGVSYNVMITCYAWNEQYKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           D V +N M++ Y+ NE++ E +L+ FR++Q   +  +   F  ++S  +N      G+QI
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 298 HTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           H+  + +   S  + V N+L+ MY+KCG  ++A+ +F  ++  +TV   +MI+ Y Q G 
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGI 425

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGS 415
             E+L+LF  M    I+    TF S+L A A    +  G    + +  +          S
Sbjct: 426 EMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYS 485

Query: 416 ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            ++D+  ++G L +A      MP     + W +L+ AC  +G+ +  +K+   ++Q   +
Sbjct: 486 CMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LE 543

Query: 475 PDSVSLLSVLS 485
           P + +   VLS
Sbjct: 544 PSNAAPYVVLS 554



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D++ G+ +H+  +K+    + + +N  + LYSK   +  ARK F ++ + +  S+N +I 
Sbjct: 23  DLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIA 82

Query: 249 CYAWN----------EQYKE---------------------SLKLFRELQFTRFDRSQFP 277
            YA            +Q  E                     +L LF  ++    D   F 
Sbjct: 83  AYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFT 142

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            S +++   + + L IG Q+H+  + +   S V V N+L+  Y K G  ++AK +F  + 
Sbjct: 143 LSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMG 200

Query: 338 HI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
            I   V W +MI AY Q     +AL LF EM R  ++ D  T AS+L A   L  LS G 
Sbjct: 201 GIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAK-SGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           Q H  +I++GF  N   GS L+D+Y+K  G + D  + F+E+ E ++V WN ++S  +QN
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320

Query: 456 GD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            +  +  L+ F  M   GY+P+  S + V+SACS+     +G Q
Sbjct: 321 EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 39/333 (11%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F  LL     + DL  G+ +H+  I +        +N  + +Y+KCGR   A++ F ++S
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 338 HIST-------------------------------VPWTAMISAYVQKGNLEEALNLFIE 366
             +                                V +  +ISAY   G    AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D  T ++++ A  +   + L  QLHS  + SGF S V   +ALL  Y K+G 
Sbjct: 131 MREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 427 LKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           L DA + F  M   R+ VSWN++I A  Q+ +    L  F++MV+ G   D  +L SVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR-SGCFDEAEKLMAQMPFEPD 544
           A +    +  GLQ+   +  K          + ++D+  +  G   +  K+  ++  EPD
Sbjct: 249 AFTCLEDLSGGLQFHGQLI-KTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPD 306

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            ++W+++++     +N EF + A +   +M+ +
Sbjct: 307 LVLWNTMVSG--YSQNEEFLEDALECFRQMQGI 337



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 36/213 (16%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-------------------GFMS--- 409
           IS     F  +L+       LS GK LHS  I+S                   G ++   
Sbjct: 4   ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63

Query: 410 ---------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                    NVFS +A++  YAK      A Q F ++PE ++VS+N LISA A  G+   
Sbjct: 64  KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAP 123

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSA-CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
            L  F  M + G   D  +L +V++A C   GLI +     +S+              ++
Sbjct: 124 ALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNAL 179

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +    ++G  D+A+++   M    DE+ W+S+I
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/745 (35%), Positives = 427/745 (57%), Gaps = 7/745 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS     GN+  A  +F+ M +R  +SW  +   Y+Q     E+F++F  MR     
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH-D 240

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + +  T +TLLS     D       +H  ++K G++S++ +CN+L+  Y        A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VFK+MP KD +S+N+L+  F  +G + +A+ L   M   G   +  TF +AL+A      
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              GR +H  VV +    N  + NAL+ +Y K   + E+R++  +MP  D V++N +I  
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIVTTAIS 308
           YA +E   ++L  F+ ++      +     ++LS      DL + G+ +H   +     S
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V NSL+ MYAKCG    ++++F  L + + + W AM++A    G+ EE L L  +M 
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +S DQ +F+  L A+A+LA L  G+QLH   ++ GF  + F  +A  DMY+K G + 
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           + ++       R++ SWN LISA  ++G  +    +F +M++ G +P  V+ +S+L+ACS
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+++GL Y++ + + + L P  EH   ++D+L RSG   EAE  +++MP +P++++W
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            S++ SC+IH NL+  +KAA+ L K+E   D + YV  SN++A  G+WE V  V+K M  
Sbjct: 721 RSLLASCKIHGNLDRGRKAAENLSKLEP-EDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           + ++K  A SWV+LK KV  F   D  HPQT EI  K+E++ + +K+ GY  DTS AL D
Sbjct: 780 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD 839

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            DEE K  +L  HSERLA+A+AL++TPEGS + + KNLR C+DCH+  K +S++ GR I 
Sbjct: 840 TDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIV 899

Query: 729 VRDSSRFHHFKDGF----CSCRDFW 749
           +RD  RFHHF+ G        + FW
Sbjct: 900 LRDQYRFHHFERGLFGKGSGFQQFW 924



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 237/467 (50%), Gaps = 3/467 (0%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTA-N 90
           M  R  VSW  ++ G  +   + E  + F  M  D G  P     A+L++ C    +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFR 59

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           E +QVH  + K G  S + +  +++  Y     +  +R+VF+EMP ++ VS+ +L+ G++
Sbjct: 60  EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
            +G  EE I ++  M+  G   ++ + +  +S+   L D +LGRQ+   VVK+     + 
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N+L+ +      V  A  +F +M E D +S+N +   YA N   +ES ++F  ++   
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + +    STLLSV+ +    + GR IH   +     S V V N+L+ MYA  GR  EA 
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +     + W ++++++V  G   +AL L   M  +  S +  TF S L A     
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
               G+ LH  V+ SG   N   G+AL+ MY K G + ++ +   +MP R++V+WNALI 
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG-LIEEG 496
             A++ D    L +F+ M   G   + ++++SVLSAC   G L+E G
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 222/422 (52%), Gaps = 3/422 (0%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLADIAL 192
           MP ++ VS+N +++G  + GL  E ++ F +M  LG KPS F  A+ ++A G   +    
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G QVH FV K+  + +V+V+ A+L LY  +  V  +RK+F EMP+ + VS+  ++  Y+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
             + +E + +++ ++      ++   S ++S      D  +GRQI  Q + +   S++ V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            NSL+ M    G  + A  IF  +S   T+ W ++ +AY Q G++EE+  +F  M R + 
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             +  T +++L     +     G+ +H  V++ GF S V   + LL MYA +G   +A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            FK+MP ++++SWN+L+++   +G +   L     M+ SG   + V+  S L+AC     
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            E+G +  + +     L   +    ++V +  + G   E+ +++ QMP   D + W+++I
Sbjct: 361 FEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418

Query: 553 NS 554
             
Sbjct: 419 GG 420



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 4/359 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N L+S Y K G ++ +R +   M  R  V+W  LIGGY++     +A   F  MR
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438

Query: 65  TDGGSDPDYVTFATLLSGCSEP-DTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            +G S  +Y+T  ++LS C  P D       +HA I+  G+ S   + NSL+  Y K   
Sbjct: 439 VEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 497

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  ++ +F  +  ++ +++NA++   A  G  EE +KL  +M+  G     F+F+  LSA
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LA +  G+Q+H   VK  F  + F+ NA  D+YSK   + E  K+          S+
Sbjct: 558 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 617

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N++I+    +  ++E    F E+           F +LL+  ++   +  G   +     
Sbjct: 618 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 677

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
              +   ++    ++D+  + GR  EA+   + +    + + W +++++    GNL+  
Sbjct: 678 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 736


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/704 (37%), Positives = 399/704 (56%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NSL+  + K   L  AR VF EMP++D+VS+  ++ G  + G   EAIK  ++M   GF 
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------HDCV 225
           P+ FT    LS+       A+GR+VH+FVVK      V VAN++L++Y K         V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 226 VE-------------------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
            E                         A  LF  MP    VS+N MI  Y  N    ++L
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           KLF R L  +     +F  +++LS  AN  +++IG+Q+H   + T      +V N+L+  
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 320 YAKCGR---------------------------------FEEAKEIFANLSHISTVPWTA 346
           YAK G                                   E A+E+F  +++   V WTA
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G  +EA++LF  M       +  T A++L   A LA L  GKQ+H   IRS 
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSF 465
              +    +A++ MYA+SGS   A + F ++  R   ++W ++I A AQ+G  +  +  F
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E+M+++G +PD ++ + VLSACSH G + EG +Y++ +  ++++ P+  HYA MVD+L R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G F EA++ + +MP EPD I W S++++CR+HKN E A+ AA++L  ++   ++  Y A
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP-NNSGAYSA 640

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  G+W   +++ KA +E+ VRK T +SW  ++SK+HVF A+D +HPQ + +   
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
              + +E+K  G+ PD    LHD D+E+K E L  HSE+LAIAF LI+TPE + + VMKN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCHAAIK ISK+T REI VRD++RFHHF+DG CSC+D+W
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 72/575 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +  +N  + N L+S + KSG LA AR +F  M +R AVSWT+++ G ++  +F EA K  
Sbjct: 93  LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +DM  DG + P   T   +LS C+         +VH+ ++K G  S + + NS+++ Y K
Sbjct: 153 LDMTADGFT-PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211

Query: 121 ---------------IRC----------------LDLARRVFKEMPQKDSVSFNALITGF 149
                          +R                 +DLA  +F+ MP +  VS+NA+I G+
Sbjct: 212 CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGY 271

Query: 150 AKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + GL+ +A+KLF  M H     P +FT  + LSA   L ++ +G+QVHA++++T    N
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 209 VFVANALLDLYSKHDCVVEARK---------------------------------LFGEM 235
             V NAL+  Y+K   V  AR+                                 +FG M
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D V++  MI  Y  N +  E++ LFR +     + + +  + +LSV A+   L  G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           QIH + I +       V+N+++ MYA+ G F  A+ +F  +     T+ WT+MI A  Q 
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  EEA+ LF EM RA +  D+ T+  +L A +    ++ GK+ +  +     ++   S 
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            A ++D+ A++G   +A +  + MP E + ++W +L+SAC  + +A+    + E ++   
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS-- 629

Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
             P++    S ++   S CG   +  + + +  +K
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEK 664



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 209/452 (46%), Gaps = 66/452 (14%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NVF  N+LL +++K   + +AR +F EMPE D VS+ VM+       ++ E++K   ++ 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC---- 323
              F  +QF  + +LS  A      +GR++H+  +     S V VANS+++MY KC    
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216

Query: 324 ---------------------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
                                      GR + A+ +F ++   S V W AMI+ Y Q G 
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276

Query: 357 LEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIR----------- 404
             +AL LF  M   ++++ D+ T  S+L A A L ++ +GKQ+H++++R           
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 405 --------SGFMS--------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                   SG +               NV S +ALL+ Y K G ++ A + F  M  R++
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           V+W A+I    QNG     +  F  M+  G +P+S +L +VLS C+    ++ G Q    
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
             +    R      A ++ +  RSG F  A ++  Q+ +  + I W+S+I +   H   E
Sbjct: 457 AIRSLLERSSSVSNA-IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            A    +++ +     D   YV + +  + AG
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 235/533 (44%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N ++S     G +  A  LF SM  R+ VSW  +I GY+Q     +A KLF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSIL---------- 108
             M  +    PD  T  ++LS C+         QVHA I++    YNS +          
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344

Query: 109 ---------------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                I   +L++ Y KI  ++ AR +F  M  +D V++ A+I 
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G N+EAI LF  M   G +P+ +T AA LS    LA +  G+Q+H   +++    
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLER 464

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +  V+NA++ +Y++      AR++F ++    + +++  MI   A + Q +E++ LF E+
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGR 325
                +  +  +  +LS  ++   +  G++ + Q      I+ E+     +VD+ A+ G 
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 584

Query: 326 FEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           F EA+E    +      + W +++SA                 CR             + 
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSA-----------------CR-------------VH 614

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
            +AELA L+  K L      SG      + SA+ ++Y+  G   DA + +K   E+ +  
Sbjct: 615 KNAELAELAAEKLLSIDPNNSG------AYSAIANVYSACGRWSDAARIWKARKEKAVRK 668

Query: 443 ---VSWNALISACAQNG---------DAQATL--KSFEDMVQSGYQPDSVSLL 481
               SW  + S     G         DA   +  + +E++  +G+ PD  S+L
Sbjct: 669 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 83/383 (21%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTI----------------------------------- 302
           ++ LL +     +   GR IH + +                                   
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 303 --VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             +  A   V   NSL+ M+AK GR  +A+ +FA +     V WT M+    + G   EA
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +   ++M     +  Q T  ++L + A   + ++G+++HSFV++ G  S V   +++L+M
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208

Query: 421 YAKSGSLKDAIQTFKE-------------------------------MPERNIVSWNALI 449
           Y K G  + A   F+                                MP R+IVSWNA+I
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268

Query: 450 SACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           +   QNG     LK F  M+ +S   PD  ++ SVLSAC++ G +  G Q        Y 
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYI 323

Query: 509 LRPKKEHYASMVDIL----CRSGCFDEAEKLMAQ-MPFEPDEIMWSSVINSCRIHKNLEF 563
           LR +  + + + + L     +SG  + A ++M Q M  + + I +++++       ++E 
Sbjct: 324 LRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMES 383

Query: 564 AKKAADQLFKMEKLRDAAPYVAM 586
           A+    ++F +   RD   + AM
Sbjct: 384 AR----EMFGVMNNRDVVAWTAM 402


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/684 (39%), Positives = 406/684 (59%), Gaps = 23/684 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L S C     A +  Q  +D   F +N+I       + +Y K     +A ++F ++P
Sbjct: 49  FILLYSKCGRLAWARKAFQDISDPNVFSFNAI-------IAAYAKESRPLIAHQLFDQIP 101

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           + D VS+N LI+ +A  G    A+ LF  M+ +G     FT +A ++A     D+ L  Q
Sbjct: 102 EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD--DVGLIGQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNE 254
           +H+  V + F   V V NALL  Y K+  + +A+++F  M  + D VS+N MI  Y  ++
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ++L LF+E+     +   F  +++L+      DL  G Q H Q I T       V +
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279

Query: 315 SLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGN-LEEALNLFIEMCRANI 372
            L+D+Y+KCG    + +++F  ++    V W  M+S Y Q    LE+AL  F +M     
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAI 431
             +  +F  ++ A + L+S S GKQ+HS  ++S   SN  S  +AL+ MY+K G+L+DA 
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M E N VS N++I+  AQ+G    +L  F+ M++    P S++ +SVLSAC+H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +EEG  YFN M +K+ + P+ EHY+ M+D+L R+G   EAE L+A+MPF P  I W+S+
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR H N+E A KAA+Q+ ++E   +AAPYV +SN+YA AG+WE V+ V+K MR+RGV
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEP-SNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED- 670
           +K    SW+E+K ++HVF A D  HP   EI   +E +  +MK+ GY PD   AL  +D 
Sbjct: 579 KKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDG 638

Query: 671 -----EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
                +EI+   L +HSE+LA+AF LI+T +G P+LV+KNLR C DCH AIK IS I GR
Sbjct: 639 TRGGEKEIR---LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGR 695

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EITVRD+ RFH FK+G CSC D+W
Sbjct: 696 EITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 252/491 (51%), Gaps = 11/491 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N  S N +I+ Y K      A +LF+ + +   VS+  LI  Y+   +   A  LF
Sbjct: 69  ISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLF 128

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR + G D D  T + +++ C   D    + Q+H+  +  G++S + + N+L+  Y K
Sbjct: 129 SGMR-EMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185

Query: 121 IRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
              LD A+RVF  M   +D VS+N++I  + +     +A+ LF EM   G     FT A+
Sbjct: 186 NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLAS 245

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEV 238
            L+A   L D++ G Q H  ++KT F +N  V + L+DLYSK    + + RK+F E+ E 
Sbjct: 246 VLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305

Query: 239 DGVSYNVMITCYAWNEQYKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           D V +N M++ Y+ NE++ E +L+ FR++Q   +  +   F  ++S  +N      G+QI
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 298 HTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           H+  + +   S  + V N+L+ MY+KCG  ++A+ +F  ++  +TV   +MI+ Y Q G 
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGI 425

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGS 415
             E+L+LF  M    I+    TF S+L A A    +  G    + +  +          S
Sbjct: 426 EMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYS 485

Query: 416 ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            ++D+  ++G L +A      MP     + W +L+ AC  +G+ +  +K+   ++Q   +
Sbjct: 486 CMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LE 543

Query: 475 PDSVSLLSVLS 485
           P + +   VLS
Sbjct: 544 PSNAAPYVVLS 554



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D++ G+ +H+  +K+    + + +N  + LYSK   +  ARK F ++ + +  S+N +I 
Sbjct: 23  DLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIA 82

Query: 249 CYAWN----------EQYKE---------------------SLKLFRELQFTRFDRSQFP 277
            YA            +Q  E                     +L LF  ++    D   F 
Sbjct: 83  AYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFT 142

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            S +++   + + L IG Q+H+  + +   S V V N+L+  Y K G  ++AK +F  + 
Sbjct: 143 LSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMG 200

Query: 338 HI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
            I   V W +MI AY Q     +AL LF EM R  ++ D  T AS+L A   L  LS G 
Sbjct: 201 GIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAK-SGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           Q H  +I++GF  N   GS L+D+Y+K  G + D  + F+E+ E ++V WN ++S  +QN
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320

Query: 456 GD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            +  +  L+ F  M   GY+P+  S + V+SACS+     +G Q
Sbjct: 321 EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ 364



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 39/333 (11%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F  LL     + DL  G+ +H+  I +        +N  + +Y+KCGR   A++ F ++S
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 338 HIST-------------------------------VPWTAMISAYVQKGNLEEALNLFIE 366
             +                                V +  +ISAY   G    AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D  T ++++ A  +   + L  QLHS  + SGF S V   +ALL  Y K+G 
Sbjct: 131 MREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 427 LKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           L DA + F  M   R+ VSWN++I A  Q+ +    L  F++MV+ G   D  +L SVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR-SGCFDEAEKLMAQMPFEPD 544
           A +    +  GLQ+   +  K          + ++D+  +  G   +  K+  ++  EPD
Sbjct: 249 AFTCLEDLSGGLQFHGQLI-KTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPD 306

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            ++W+++++     +N EF + A +   +M+ +
Sbjct: 307 LVLWNTMVSG--YSQNEEFLEDALECFRQMQGI 337



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 36/213 (16%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-------------------GFMS--- 409
           IS     F  +L+       LS GK LHS  I+S                   G ++   
Sbjct: 4   ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63

Query: 410 ---------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                    NVFS +A++  YAK      A Q F ++PE ++VS+N LISA A  G+   
Sbjct: 64  KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAP 123

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSA-CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
            L  F  M + G   D  +L +V++A C   GLI +     +S+              ++
Sbjct: 124 ALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNAL 179

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +    ++G  D+A+++   M    DE+ W+S+I
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/752 (35%), Positives = 421/752 (55%), Gaps = 11/752 (1%)

Query: 5   NTVSTNM-----LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           N++ST+      L+  Y    +L  AR +F+       +    ++ GY Q  ++RE  +L
Sbjct: 58  NSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLEL 117

Query: 60  FVDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           F  MR+     D    TFA  L  C+        +++ +  ++ G      + +S++   
Sbjct: 118 FGLMRSRNLEVDSCSCTFA--LKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFL 175

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  A+RVF  MP KD V +N++I G+ + G  + A +LF EM   G KPS  T  
Sbjct: 176 VKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMT 235

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + + A  G+ ++ LG+ +H +V+      ++ V  + +D+YSK   +  AR +F +MP  
Sbjct: 236 SLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTR 295

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + VS+N MI+    N    ES  LF  L  +          +LL   +    L  G+ +H
Sbjct: 296 NLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILH 355

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              I +   S + ++ ++VD+Y+KCG  ++A  +F  +   + + WTAM+    Q G+ E
Sbjct: 356 GCAIRSFE-SNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAE 414

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           +AL LF +M    I+A+  TF S++ + A L SL  G+ +H  + R GF  ++ + +AL+
Sbjct: 415 DALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALV 474

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           DMYAK G +  A + F      +++V WN++I+    +G     +  +  M++ G +P+ 
Sbjct: 475 DMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQ 534

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            + LS+LSACSH  L+E+G+  FNSM + + +RP ++HYA +VD+L R+G F+EA+ L+ 
Sbjct: 535 TTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIE 594

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MPF+P   +  ++++ CR HKN+    + +D+L  ++ + +   Y+ +SNIYA A +W+
Sbjct: 595 KMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAM-NPGIYIMLSNIYAEARRWD 653

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
            V  ++  MR RG++K   YS VE  + VH F A D  HP   EI   +E+L   ++  G
Sbjct: 654 KVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSG 713

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y PDTSC L D DEE+KV  L  HSERLAIAF L+ TP GS I + KNLR C DCH   K
Sbjct: 714 YVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTK 773

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ISKI  REI VRD++RFHHF +G CSC D+W
Sbjct: 774 YISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 246/477 (51%), Gaps = 5/477 (1%)

Query: 87  DTANELIQV---HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           +++  LI V   HA II    ++   +   LV +Y  +R L+ AR VF +  Q   +  N
Sbjct: 40  ESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCN 99

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           A++ G+ + G   E ++LF  M+    +    +   AL A     D  +G ++ +  V+ 
Sbjct: 100 AMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK 159

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
              +N FV ++++    K   + EA+++F  MP  D V +N +I  Y     +  + +LF
Sbjct: 160 GMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLF 219

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
            E+  +    S    ++L+       +L++G+ +H   +     +++ V  S VDMY+K 
Sbjct: 220 FEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKM 279

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G  E A+ +F  +   + V W AMIS  V+ G + E+ +LF  + R++   D  T  S+L
Sbjct: 280 GDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLL 339

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           +  ++ ASL+ GK LH   IRS F SN+   +A++D+Y+K GSLK A   F  M +RN++
Sbjct: 340 QGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVI 398

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +W A++   AQNG A+  L+ F  M + G   +SV+ +S++ +C+H G ++ G +  +  
Sbjct: 399 TWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRG-RSIHGH 457

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             +        +  ++VD+  + G  + AE++ +      D ++W+S+I    +H +
Sbjct: 458 LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 239/473 (50%), Gaps = 13/473 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    + +IS  VK G +  A+ +F+ M ++  V W  +IGGY Q   F  AF+LF +M
Sbjct: 163 KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEM 222

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  P  +T  +L+  C           +H  ++  G  + +++  S VD Y K+  
Sbjct: 223 HGS-GIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAAL 181
           ++ AR VF +MP ++ VS+NA+I+G  + GL  E+  LF  +     GF   D T   +L
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF---DLTTIVSL 338

Query: 182 SAGVG-LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             G    A +A G+ +H   +++ F  N+ ++ A++DLYSK   + +A  +F  M + + 
Sbjct: 339 LQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNV 397

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +++  M+   A N   +++L+LF ++Q      +   F +L+   A+   L+ GR IH  
Sbjct: 398 ITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGH 457

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS--TVPWTAMISAYVQKGNLE 358
                   ++    +LVDMYAKCG+   A+ IF++ S IS   V W +MI+ Y   G+  
Sbjct: 458 LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGS-ISKDVVLWNSMITGYGMHGHGY 516

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-L 417
           +A+ ++ +M    +  +Q TF S+L A +    +  G  L + + R   +  +    A L
Sbjct: 517 QAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACL 576

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +D+ +++G  ++A    ++MP +       AL+S C  + +    +++ + ++
Sbjct: 577 VDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLL 629



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 40/369 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N VS N +ISG V++G +  + +LF+ +V                           
Sbjct: 292 MPTRNLVSWNAMISGCVRNGLVGESFDLFHRLV--------------------------- 324

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
              R+ GG   D  T  +LL GCS+  +      +H   I+  + S LI+  ++VD Y K
Sbjct: 325 ---RSSGGF--DLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSK 378

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A  VF  M  ++ +++ A++ G A+ G  E+A++LF +MQ  G   +  TF + 
Sbjct: 379 CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSL 438

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--GEMPEV 238
           + +   L  +  GR +H  + +  F  ++    AL+D+Y+K   +  A ++F  G + + 
Sbjct: 439 VHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISK- 497

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D V +N MIT Y  +    +++ ++ ++       +Q  F +LLS  ++   ++ G  + 
Sbjct: 498 DVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLF 557

Query: 299 TQTIVTTAISEV-KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
                   I  + K    LVD+ ++ GRFEEA+ +   +  +   P TA++ A +     
Sbjct: 558 NSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQAL---IEKMPFQPGTAVLEALLSGCRT 614

Query: 358 EEALNLFIE 366
            + +NL I+
Sbjct: 615 HKNINLGIQ 623


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/749 (34%), Positives = 420/749 (56%), Gaps = 57/749 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +++VS N +ISGY+++     AR LF+ M +R   SW +++ GY +  +  +A +LF
Sbjct: 75  MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + D V++ +LLSG ++                 GY                
Sbjct: 135 DLM-----PEKDVVSWNSLLSGYAQN----------------GY---------------- 157

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D AR VF  MP+K+S+S+N L+  +   G  EEA  LF             ++   
Sbjct: 158 ---VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCL 210

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +   V    +   R    ++     V +    N ++  Y++   + +AR+LF E P  D 
Sbjct: 211 MGGFVRKKKLGDAR----WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV 266

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++  M++ Y  N    E+   F E+     ++++  ++ +++       + I R++   
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIAREL--- 319

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              +     +   N+++  Y + G   +A++ F  +     V W A+I+ Y Q G+ EEA
Sbjct: 320 -FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           LN+F+E+ +   S ++ATF   L   A++A+L LGKQ+H   ++ G+ +  F G+ALL M
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K GS+ +A  TF+ + E+++VSWN +++  A++G  +  L  FE M  +G +PD +++
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + VLSACSH GL++ G +YF SMT+ Y + P  +HY  M+D+L R+G  +EA+ L+  MP
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMP 558

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           F+P    W +++ + RIH N E  +KAA+ +FKME  +++  YV +SN+YA +G+W    
Sbjct: 559 FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP-QNSGMYVLLSNLYAASGRWVDAD 617

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  MR+ GV+KV  YSWVE+++K+H F+  D  HP+   I   +E L  +M++EGY  
Sbjct: 618 KMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVS 677

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
            T   LHD +EE K   LKYHSE+LA+AF ++  P G PI VMKNLR C DCH+AIK IS
Sbjct: 678 LTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHIS 737

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GR I +RDS RFHHF +GFCSC D+W
Sbjct: 738 KIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 258/609 (42%), Gaps = 93/609 (15%)

Query: 84  SEPDTANELIQVH-ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
           SE  T N   +V   DI+K+         N  + ++ +    D A  VF  MP++ SVS+
Sbjct: 33  SESVTNNNKPRVKDPDILKW---------NKAISTHMRNGHCDSALHVFNTMPRRSSVSY 83

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           NA+I+G+ +      A  LF +M         F++   L+  V    +   R++   + +
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPERDL----FSWNVMLTGYVRNCRLGDARRLFDLMPE 139

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
               ++V   N+LL  Y+++  V EAR++F  MPE + +S+N ++  Y  N + +E+  L
Sbjct: 140 ----KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLL 195

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F     ++ D     ++ L+     K  L   R +  +  V  AIS     N+++  YA+
Sbjct: 196 FE----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS----WNTMISGYAQ 247

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G   +A+ +F          WTAM+S YVQ G L+EA   F EM   N    + ++ ++
Sbjct: 248 GGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAM 303

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           +    +   + + ++L      S    N+ S + ++  Y + G +  A + F  MP+R+ 
Sbjct: 304 IAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-------------- 488
           VSW A+I+  AQ+G  +  L  F ++ Q G   +  +    LS C+              
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419

Query: 489 ---------------------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
                                 CG I+E    F  + +K  +      + +M+    R G
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS-----WNTMLAGYARHG 474

Query: 528 CFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP-- 582
              +A  +   M     +PDEI    V+++C  H  L    +  +  + M K     P  
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACS-HTGL--LDRGTEYFYSMTKDYGVIPTS 531

Query: 583 --YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL--KSKVHVFTANDELHPQ 638
             Y  M ++   AG+ E    + + M      +  A SW  L   S++H    N EL  +
Sbjct: 532 KHYTCMIDLLGRAGRLEEAQDLIRNM----PFQPGAASWGALLGASRIH---GNTELGEK 584

Query: 639 TNEIRRKIE 647
             E+  K+E
Sbjct: 585 AAEMVFKME 593


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/627 (39%), Positives = 399/627 (63%), Gaps = 5/627 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A +VF +MP+++ V++  +IT FA+ G   +AI LF++M+  G+ P  FT+++ LSA   
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDGVSY 243
           L  +ALG+Q+H+ V++     +V V  +L+D+Y+K      V ++RK+F +MPE + +S+
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 244 NVMITCYAWN-EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             +IT YA + E  KE+++LF ++       + F FS++L    N  D   G Q+++  +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S   V NSL+ MYA+ GR E+A++ F  L   + V + A++  Y +    EEA  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF E+    I     TFAS+L  +A + ++  G+Q+H  +++ G+ SN    +AL+ MY+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + G+++ A Q F EM +RN++SW ++I+  A++G A   L+ F  M+++G +P+ ++ ++
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH G+I EG ++FNSM +++ + P+ EHYA MVD+L RSG   EA + +  MP  
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D ++W +++ +CR+H N E  + AA+ + + E   D A Y+ +SN++A AGQW+ V ++
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKI 487

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K+M+ER + K    SW+E++++VH F   +  HPQ  +I ++++ L  ++K+ GY PDT
Sbjct: 488 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 547

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD +EE K + L  HSE++A+AF LI+T +  PI + KNLR C DCH AIK IS  
Sbjct: 548 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 607

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
           TGREI VRDS+RFHH K+G CSC D+W
Sbjct: 608 TGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 256/471 (54%), Gaps = 8/471 (1%)

Query: 23  ATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSG 82
           A A ++F+ M +R  V+WT++I  ++Q    R+A  LF+DM    G  PD  T++++LS 
Sbjct: 7   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELS-GYVPDRFTYSSVLSA 65

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC---LDLARRVFKEMPQKDS 139
           C+E        Q+H+ +I+ G    + +  SLVD Y K      +D +R+VF++MP+ + 
Sbjct: 66  CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 125

Query: 140 VSFNALITGFAKEG-LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           +S+ A+IT +A+ G  ++EAI+LF +M     +P+ F+F++ L A   L+D   G QV++
Sbjct: 126 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 185

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           + VK        V N+L+ +Y++   + +ARK F  + E + VSYN ++  YA N + +E
Sbjct: 186 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 245

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +  LF E+  T    S F F++LLS  A+   +  G QIH + +     S   + N+L+ 
Sbjct: 246 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 305

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY++CG  E A ++F  +   + + WT+MI+ + + G    AL +F +M       ++ T
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365

Query: 379 FASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           + ++L A + +  +S G K  +S     G +  +   + ++D+  +SG L +A++    M
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 425

Query: 438 P-ERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSA 486
           P   + + W  L+ AC  +G+ +    + E ++ Q    P +  LLS L A
Sbjct: 426 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 476



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 51/442 (11%)

Query: 12  LISGYVK---SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQF-REAFKLFVDMRTDG 67
           L+  Y K    G++  +R++F  M +   +SWT +I  Y+Q  +  +EA +LF  M   G
Sbjct: 97  LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM-ISG 155

Query: 68  GSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              P++ +F+++L  C   S+P T     QV++  +K G  S+  + NSL+  Y +   +
Sbjct: 156 HIRPNHFSFSSVLKACGNLSDPYTGE---QVYSYAVKLGIASVNCVGNSLISMYARSGRM 212

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR+ F  + +K+ VS+NA++ G+AK   +EEA  LF E+   G   S FTFA+ LS  
Sbjct: 213 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 272

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +  G Q+H  ++K  +  N  + NAL+ +YS+   +  A ++F EM + + +S+ 
Sbjct: 273 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 332

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT +A +     +L++F ++  T    ++  +  +LS  ++   +  G Q H  ++  
Sbjct: 333 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYK 391

Query: 305 --TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQKGNLEEAL 361
               +  ++    +VD+  + G   EA E   ++  ++  + W  ++ A    GN E   
Sbjct: 392 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE--- 448

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                               + R +AE+          ++++ S             +++
Sbjct: 449 --------------------LGRHAAEMILEQEPDDPAAYILLS-------------NLH 475

Query: 422 AKSGSLKDAIQTFKEMPERNIV 443
           A +G  KD ++  K M ERN++
Sbjct: 476 ASAGQWKDVVKIRKSMKERNLI 497



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 125/228 (54%), Gaps = 2/228 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y +SG +  AR+ F+ + ++  VS+  ++ GY++  +  EAF LF ++  D G 
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI-ADTGI 258

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                TFA+LLSG +      +  Q+H  ++K GY S   ICN+L+  Y +   ++ A +
Sbjct: 259 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 318

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EM  ++ +S+ ++ITGFAK G    A+++F +M   G KP++ T+ A LSA   +  
Sbjct: 319 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 378

Query: 190 IALG-RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           I+ G +  ++   +   V  +     ++DL  +   +VEA +    MP
Sbjct: 379 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LIS Y + GN+  A ++FN M DR  +SWT +I G+++      A ++F  M 
Sbjct: 296 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM- 354

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
            + G+ P+ +T+  +LS CS     +E
Sbjct: 355 LETGTKPNEITYVAVLSACSHVGMISE 381


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/627 (39%), Positives = 399/627 (63%), Gaps = 5/627 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A +VF +MP+++ V++  +IT FA+ G   +AI LF++M+  G+ P  FT+++ LSA   
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDGVSY 243
           L  +ALG+Q+H+ V++     +V V  +L+D+Y+K      V ++RK+F +MPE + +S+
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 244 NVMITCYAWN-EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             +IT YA + E  KE+++LF ++       + F FS++L    N  D   G Q+++  +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S   V NSL+ MYA+ GR E+A++ F  L   + V + A++  Y +    EEA  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF E+    I     TFAS+L  +A + ++  G+Q+H  +++ G+ SN    +AL+ MY+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + G+++ A Q F EM +RN++SW ++I+  A++G A   L+ F  M+++G +P+ ++ ++
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH G+I EG ++FNSM +++ + P+ EHYA MVD+L RSG   EA + +  MP  
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D ++W +++ +CR+H N E  + AA+ + + E   D A Y+ +SN++A AGQW+ V ++
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEP-DDPAAYILLSNLHASAGQWKDVVKI 482

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K+M+ER + K    SW+E++++VH F   +  HPQ  +I ++++ L  ++K+ GY PDT
Sbjct: 483 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 542

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD +EE K + L  HSE++A+AF LI+T +  PI + KNLR C DCH AIK IS  
Sbjct: 543 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 602

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
           TGREI VRDS+RFHH K+G CSC D+W
Sbjct: 603 TGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 256/471 (54%), Gaps = 8/471 (1%)

Query: 23  ATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSG 82
           A A ++F+ M +R  V+WT++I  ++Q    R+A  LF+DM    G  PD  T++++LS 
Sbjct: 2   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELS-GYVPDRFTYSSVLSA 60

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC---LDLARRVFKEMPQKDS 139
           C+E        Q+H+ +I+ G    + +  SLVD Y K      +D +R+VF++MP+ + 
Sbjct: 61  CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 120

Query: 140 VSFNALITGFAKEG-LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           +S+ A+IT +A+ G  ++EAI+LF +M     +P+ F+F++ L A   L+D   G QV++
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 180

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           + VK        V N+L+ +Y++   + +ARK F  + E + VSYN ++  YA N + +E
Sbjct: 181 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 240

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +  LF E+  T    S F F++LLS  A+   +  G QIH + +     S   + N+L+ 
Sbjct: 241 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 300

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY++CG  E A ++F  +   + + WT+MI+ + + G    AL +F +M       ++ T
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360

Query: 379 FASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           + ++L A + +  +S G K  +S     G +  +   + ++D+  +SG L +A++    M
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 420

Query: 438 P-ERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSA 486
           P   + + W  L+ AC  +G+ +    + E ++ Q    P +  LLS L A
Sbjct: 421 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 471



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 51/442 (11%)

Query: 12  LISGYVK---SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQF-REAFKLFVDMRTDG 67
           L+  Y K    G++  +R++F  M +   +SWT +I  Y+Q  +  +EA +LF  M   G
Sbjct: 92  LVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM-ISG 150

Query: 68  GSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              P++ +F+++L  C   S+P T     QV++  +K G  S+  + NSL+  Y +   +
Sbjct: 151 HIRPNHFSFSSVLKACGNLSDPYTGE---QVYSYAVKLGIASVNCVGNSLISMYARSGRM 207

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR+ F  + +K+ VS+NA++ G+AK   +EEA  LF E+   G   S FTFA+ LS  
Sbjct: 208 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 267

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +  G Q+H  ++K  +  N  + NAL+ +YS+   +  A ++F EM + + +S+ 
Sbjct: 268 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 327

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT +A +     +L++F ++  T    ++  +  +LS  ++   +  G Q H  ++  
Sbjct: 328 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYK 386

Query: 305 --TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQKGNLEEAL 361
               +  ++    +VD+  + G   EA E   ++  ++  + W  ++ A    GN E   
Sbjct: 387 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE--- 443

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                               + R +AE+          ++++ S             +++
Sbjct: 444 --------------------LGRHAAEMILEQEPDDPAAYILLS-------------NLH 470

Query: 422 AKSGSLKDAIQTFKEMPERNIV 443
           A +G  KD ++  K M ERN++
Sbjct: 471 ASAGQWKDVVKIRKSMKERNLI 492



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 125/228 (54%), Gaps = 2/228 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y +SG +  AR+ F+ + ++  VS+  ++ GY++  +  EAF LF ++  D G 
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI-ADTGI 253

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                TFA+LLSG +      +  Q+H  ++K GY S   ICN+L+  Y +   ++ A +
Sbjct: 254 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 313

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EM  ++ +S+ ++ITGFAK G    A+++F +M   G KP++ T+ A LSA   +  
Sbjct: 314 VFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 373

Query: 190 IALG-RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           I+ G +  ++   +   V  +     ++DL  +   +VEA +    MP
Sbjct: 374 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LIS Y + GN+  A ++FN M DR  +SWT +I G+++      A ++F  M 
Sbjct: 291 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM- 349

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
            + G+ P+ +T+  +LS CS     +E
Sbjct: 350 LETGTKPNEITYVAVLSACSHVGMISE 376


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/749 (34%), Positives = 419/749 (55%), Gaps = 57/749 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +++VS N +ISGY+++     AR LF+ M +R   SW +++ GY +  +  +A +LF
Sbjct: 75  MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + D V++ +LLSG ++                          N  VD    
Sbjct: 135 DLM-----PEKDVVSWNSLLSGYAQ--------------------------NGYVDE--- 160

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
                 AR VF  MP+K+S+S+N L+  +   G  EEA  LF             ++   
Sbjct: 161 ------AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCL 210

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +   V    +   R    ++     V +    N ++  Y++   + +AR+LF E P  D 
Sbjct: 211 MGGFVRKKKLGDAR----WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV 266

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++  M++ Y  N    E+   F E+     ++++  ++ +++       + I R++   
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIAREL--- 319

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              +     +   N+++  Y + G   +A++ F  +     V W A+I+ Y Q G+ EEA
Sbjct: 320 -FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           LN+F+E+ +   S ++ATF   L   A++A+L LGKQ+H   ++ G+ +  F G+ALL M
Sbjct: 379 LNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAM 438

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K GS+ +A  TF+ + E+++VSWN +++  A++G  +  L  FE M  +G +PD +++
Sbjct: 439 YFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + VLSACSH GL++ G +YF SMT+ Y + P  +HY  M+D+L R+G  +EA+ L+  MP
Sbjct: 499 VGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMP 558

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           F+P    W +++ + RIH N E  +KAA+ +FKME  +++  YV +SN+YA +G+W    
Sbjct: 559 FQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP-QNSGMYVLLSNLYAASGRWVDAD 617

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  MR+ GV+KV  YSWVE+++K+H F+  D  HP+   I   +E L  +M++EGY  
Sbjct: 618 KMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVS 677

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
            T   LHD +EE K   LKYHSE+LA+AF ++  P G PI VMKNLR C DCH+AIK IS
Sbjct: 678 LTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHIS 737

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GR I +RDS RFHHF +GFCSC D+W
Sbjct: 738 KIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/580 (23%), Positives = 247/580 (42%), Gaps = 83/580 (14%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N  + ++ +    D A  VF  MP++ SVS+NA+I+G+ +      A  LF +M      
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL- 111

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
              F++   L+  V    +   R++   + +    ++V   N+LL  Y+++  V EAR++
Sbjct: 112 ---FSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYAQNGYVDEAREV 164

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  MPE + +S+N ++  Y  N + +E+  LF     ++ D     ++ L+     K  L
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNCLMGGFVRKKKL 220

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
              R +  +  V  AIS     N+++  YA+ G   +A+ +F          WTAM+S Y
Sbjct: 221 GDARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGY 276

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           VQ G L+EA   F EM   N    + ++ +++    +   + + ++L      S    N+
Sbjct: 277 VQNGMLDEAKTFFDEMPEKN----EVSYNAMIAGYVQTKKMDIAREL----FESMPCRNI 328

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
            S + ++  Y + G +  A + F  MP+R+ VSW A+I+  AQ+G  +  L  F ++ Q 
Sbjct: 329 SSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388

Query: 472 GYQPDSVSLLSVLSACS-----------------------------------HCGLIEEG 496
           G   +  +    LS C+                                    CG I+E 
Sbjct: 389 GESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEA 448

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVIN 553
              F  + +K  +      + +M+    R G   +A  +   M     +PDEI    V++
Sbjct: 449 NDTFEGIEEKDVVS-----WNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLS 503

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAMRER 609
           +C  H  L    +  +  + M K     P    Y  M ++   AG+ E    + + M   
Sbjct: 504 ACS-HTGL--LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNM--- 557

Query: 610 GVRKVTAYSWVEL--KSKVHVFTANDELHPQTNEIRRKIE 647
              +  A SW  L   S++H    N EL  +  E+  K+E
Sbjct: 558 -PFQPGAASWGALLGASRIH---GNTELGEKAAEMVFKME 593



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 58/262 (22%)

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           + GL++ G +YF  M ++Y + P  +HY  M+D+L R    +E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ + RIH N E  +KAA   FKM       P            Q   +S+    MR+
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKM------GP------------QNSGISK----MRD 856

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            GV+KV  YSW E+++K+H F+    L        R+ EN+       G+  +    + +
Sbjct: 857 VGVQKVPGYSWFEVQNKIHTFSVGLFL-------SRERENI-------GFLEELDLKMRE 902

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN-LRACTDCHAAIKLISKITGREI 727
             EE K  +LKY SE LA A  ++  P G P  VMK  +  C DC +AIK +SKI GR I
Sbjct: 903 R-EEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLI 961

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
           T+RDS   H F +  CSC ++W
Sbjct: 962 TLRDS---HRFNESICSCGEYW 980


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/740 (36%), Positives = 421/740 (56%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+K G++    E+F  M  +  V+WT L+ G +      E   LF  MR +G   P
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEG-IWP 199

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFA++LS  +     +   +VHA  +KFG  S + +CNSL++ Y K   ++ A+ VF
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVF 259

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +D VS+N L+ G        EA++LF E +    K +  T+A  +     L  +A
Sbjct: 260 NWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLA 319

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG-EMPEVDGVSYNVMITCY 250
           L RQ+H+ V+K  F     V  AL D YSK   + +A  +F       + VS+  +I+  
Sbjct: 320 LARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGC 379

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     ++ LF  ++  R   ++F +S +L    + L      QIH Q I T      
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIP 435

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+  Y+K G  E+A  IF  +     V W+AM+S + Q G+ E A  LF +M   
Sbjct: 436 FVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQ 495

Query: 371 NISADQATFASILRASA-ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I  ++ T +S++ A A   A +  G+Q H+  I+  +   +   SAL+ MY++ G++  
Sbjct: 496 GIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDS 555

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+   +R++VSWN++IS  AQ+G +   +++F  M  SG Q D V+ L+V+  C+H
Sbjct: 556 AQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+ EG QYF+SM + +K+ P  EHYA MVD+  R+G  DE   L+  MPF    ++W 
Sbjct: 616 NGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWR 675

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HKN+E  K +AD+L  +E   D++ YV +SNIYA AG+W+   +V+K M  R
Sbjct: 676 TLLGACRVHKNVELGKFSADKLLSLEP-HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYR 734

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            V+K    SW+++K+KVH F A D+ HP +++I +K++ ++  +K++GY P+TS  LHD 
Sbjct: 735 KVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDI 794

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E+ K   L  HSERLA+AF LI TP G+P+ ++KNLR C DCH  +K++S I  REI +
Sbjct: 795 AEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIM 854

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD SRFHHF  G CSC DFW
Sbjct: 855 RDCSRFHHFNGGACSCGDFW 874



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/534 (30%), Positives = 285/534 (53%), Gaps = 17/534 (3%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC-SEPDTA-NELIQVHADIIKFGY 104
           Y+++    E    F   R  GG   D  T + +L  C S PD    E  Q+H   +K G+
Sbjct: 74  YARRGMVLEVLDQFSVARR-GGVLVDSATLSCVLKACRSVPDRVLGE--QLHCLCVKCGH 130

Query: 105 NSILIICN-SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV 163
           +   +    SLVD Y K   +     VF+ MP+K+ V++ +L+TG A   ++ E + LF 
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
            M+  G  P+ FTFA+ LSA      + LG++VHA  VK     +VFV N+L+++Y+K  
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            V +A+ +F  M   D VS+N ++     NE   E+L+LF E + T    +Q  ++T++ 
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTV 342
           + AN   L + RQ+H+  +         V  +L D Y+KCG   +A  IF+      + V
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVV 370

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WTA+IS  +Q G++  A+ LF  M    +  ++ T++++L+AS  +    L  Q+H+ V
Sbjct: 371 SWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQV 426

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I++ +    F G+ALL  Y+K GS +DA+  FK + ++++V+W+A++S  AQ GD +   
Sbjct: 427 IKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGAT 486

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACS-HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
             F  M   G +P+  ++ SV+ AC+     +++G Q F++++ KY+        +++V 
Sbjct: 487 YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVS 545

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           +  R G  D A+ ++ +   + D + W+S+I+    H    ++ KA +   +ME
Sbjct: 546 MYSRKGNIDSAQ-IVFERQTDRDLVSWNSMISGYAQHG---YSMKAIETFRQME 595



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 218/447 (48%), Gaps = 9/447 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +  A+ +FN M  R  VSW  L+ G        EA +LF + R   G 
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGK 299

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                T+AT++  C+         Q+H+ ++K G++    +  +L D+Y K   L  A  
Sbjct: 300 MTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALN 358

Query: 130 VFK-EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F      ++ VS+ A+I+G  + G    A+ LF  M+     P++FT++A L A + + 
Sbjct: 359 IFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI- 417

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              L  Q+HA V+KTN+    FV  ALL  YSK     +A  +F  + + D V+++ M++
Sbjct: 418 ---LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA-NKLDLQIGRQIHTQTIVTTAI 307
           C+A     + +  LF ++       ++F  S+++   A     +  GRQ H  +I     
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V+++LV MY++ G  + A+ +F   +    V W +MIS Y Q G   +A+  F +M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGS 426
             + I  D  TF +++        +  G+Q    ++R   ++      A ++D+Y+++G 
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L + +   ++MP     + W  L+ AC
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGAC 681



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L+S Y + GN+ +A+ +F    DR  VSW  +I GY+Q     +A + F  M    G
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEAS-G 598

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLA 127
              D VTF  ++ GC+      E  Q    +++    N  +     +VD Y +   LD  
Sbjct: 599 IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDET 658

Query: 128 RRVFKEMP 135
             + ++MP
Sbjct: 659 MSLIRDMP 666


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/669 (38%), Positives = 377/669 (56%), Gaps = 32/669 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+L+ +Y K   +      F+++P +D V++N LI G++  GL   A+K +   M+    
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
             +  T    L        ++LG+Q+H  V+K  F   + V + LL +Y+   C+ +A+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195

Query: 231 LFGEMP------------------------------EVDGVSYNVMITCYAWNEQYKESL 260
           +F  +                               E D VS+  MI   A N   KE++
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
           + FRE++       Q+PF ++L        +  G+QIH   I T     + V ++L+DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
            KC     AK +F  +   + V WTAM+  Y Q G  EEA+ +F++M R+ I  D  T  
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
             + A A ++SL  G Q H   I SG +  V   ++L+ +Y K G + D+ + F EM  R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           + VSW A++SA AQ G A  T++ F+ MVQ G +PD V+L  V+SACS  GL+E+G +YF
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             MT +Y + P   HY+ M+D+  RSG  +EA + +  MPF PD I W++++++CR   N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
           LE  K AA+ L +++     A Y  +S+IYA  G+W+SV+Q+++ MRE+ V+K    SW+
Sbjct: 556 LEIGKWAAESLIELDP-HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           + K K+H F+A+DE  P  ++I  K+E L  ++   GYKPDTS   HD +E +KV+ L Y
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSERLAIAF LI  P G PI V KNLR C DCH A K IS +TGREI VRD+ RFH FKD
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734

Query: 741 GFCSCRDFW 749
           G CSC DFW
Sbjct: 735 GTCSCGDFW 743



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 261/519 (50%), Gaps = 33/519 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  N  S N L+  Y K+G ++     F  + DR  V+W +LI GYS       A K +
Sbjct: 67  IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  D  ++   VT  T+L   S     +   Q+H  +IK G+ S L++ + L+  Y  
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186

Query: 121 IRCLDLARRVFKEMP------------------------------QKDSVSFNALITGFA 150
           + C+  A++VF  +                               +KDSVS+ A+I G A
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + GL +EAI+ F EM+  G K   + F + L A  GL  I  G+Q+HA +++TNF ++++
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V +AL+D+Y K  C+  A+ +F  M + + VS+  M+  Y    + +E++K+F ++Q + 
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            D   +     +S  AN   L+ G Q H + I +  I  V V+NSLV +Y KCG  +++ 
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  ++    V WTAM+SAY Q G   E + LF +M +  +  D  T   ++ A +   
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486

Query: 391 SLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G++    +    G + ++   S ++D++++SG L++A++    MP   + + W  L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546

Query: 449 ISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSA 486
           +SAC   G+ +    + E +++   + P   +LLS + A
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 194/428 (45%), Gaps = 74/428 (17%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG-------------------- 233
           + +H  +++       F+ N ++  Y+       AR++F                     
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 234 -----------EMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFST 280
                      ++P+ DGV++NV+I  Y+ +     ++K +  +   F+  + ++    T
Sbjct: 86  GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA-NLTRVTLMT 144

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L + ++   + +G+QIH Q I     S + V + L+ MYA  G   +AK++F  L   +
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204

Query: 341 T------------------------------VPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           T                              V W AMI    Q G  +EA+  F EM   
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  DQ  F S+L A   L +++ GKQ+H+ +IR+ F  +++ GSAL+DMY K   L  A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  M ++N+VSW A++    Q G A+  +K F DM +SG  PD  +L   +SAC++ 
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
             +EEG Q+         +     HY     S+V +  + G  D++ +L  +M    D +
Sbjct: 385 SSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAV 438

Query: 547 MWSSVINS 554
            W++++++
Sbjct: 439 SWTAMVSA 446



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+FS + LL  Y+K+G + +   TF+++P+R+ V+WN LI   + +G   A +K++  M+
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 470 QS-GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY----ASMVDILC 524
           +        V+L+++L   S  G +  G Q    +     ++   E Y    + ++ +  
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV-----IKLGFESYLLVGSPLLYMYA 185

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK-MEKLRDAAPY 583
             GC  +A+K+   +  + + +M++S++        +E     A QLF+ MEK  D+  +
Sbjct: 186 NVGCISDAKKVFYGLD-DRNTVMYNSLMGGLLACGMIE----DALQLFRGMEK--DSVSW 238

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            AM    A  G  +   +  + M+ +G++
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLK 267



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 51/269 (18%), Positives = 108/269 (40%), Gaps = 28/269 (10%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           K +H  +IR+      F  + ++  YA   S   A + F  +P+ N+ SWN L+ A ++ 
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G       +FE +       D V+   ++   S  GL+   ++ +N+M + +     +  
Sbjct: 86  GLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141

Query: 516 YASMVDILCRSGCFDEAEKLMAQ---MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             +M+ +   +G     +++  Q   + FE   ++ S ++    ++ N+     A    +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVFY 198

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            ++  R+   Y ++       G  E   Q+ + M +  V      SW  +   +      
Sbjct: 199 GLDD-RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV------SWAAMIKGL------ 245

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                  N + ++     +EMK +G K D
Sbjct: 246 -----AQNGLAKEAIECFREMKVQGLKMD 269


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/743 (36%), Positives = 418/743 (56%), Gaps = 3/743 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L   +   G +A  R+LFN +       + +LI G+S     + +  L+  +R   
Sbjct: 48  SITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKT 107

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              PD  T+A  +S  S  +     + +HA  I  G  S L + +++VD Y K    +LA
Sbjct: 108 NLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA 167

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  MP++D+V +N +I+GF++    E++I++FV+M  +G      T A  L+A   L
Sbjct: 168 RKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL 227

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +  LG  +     K     +V+V   L+ LYSK     + R LF ++ + D +SYN MI
Sbjct: 228 QEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMI 287

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + Y +N + + ++ LFREL  +    +      L+ V      LQ+ R I   ++    I
Sbjct: 288 SGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGII 347

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V+ +L  +Y +    + A+++F      S   W AMIS Y Q G  + A++LF EM
Sbjct: 348 LQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM 407

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +S +  T  SIL A A+L +LS+GK +H  +      SNV+  +AL+DMYAK GS+
Sbjct: 408 M-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSI 466

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +A Q F  M ++N+V+WNA+I+    +G  +  LK F +M+QSG  P  V+ LS+L AC
Sbjct: 467 VEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYAC 526

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG + F+SM   Y  +P  EHYA MVDIL R+G    A + + +MP EP   +
Sbjct: 527 SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAV 586

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C IHKN E A  A+ +LF+++   +   YV +SNIY+    +   + V++ ++
Sbjct: 587 WGALLGACMIHKNTEMANVASKRLFQLDP-ENVGYYVLLSNIYSTDRNFPKAASVRQVVK 645

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT-SCAL 666
           +R + K    + +E+  + +VFT+ D  HPQ   I   +E L  +M++ GY+ +T + AL
Sbjct: 646 KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTAL 705

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD ++E K   +  HSE+LAIAF LI+T  G+ I ++KNLR C DCH A K ISKIT R 
Sbjct: 706 HDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERV 765

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD++RFHHFK+G CSC D+W
Sbjct: 766 IVVRDANRFHHFKNGICSCGDYW 788



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 252/508 (49%), Gaps = 12/508 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F TLL+  +   T ++L+Q+ A +I  G +  L     L   +  +  +   R++F ++ 
Sbjct: 17  FLTLLNNAT---TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGR 194
           + D   FN LI GF+  GL + +I L+  + +    +P +FT+A A+SA   L D  +G 
Sbjct: 74  KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGV 133

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            +HA  +      N+FV +A++DLY K      ARK+F  MPE D V +N MI+ ++ N 
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            +++S+++F ++            +T+L+ VA   + ++G  I          S+V V  
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ +Y+KCG+  + + +F  +     + + AMIS Y      E A+ LF E+  +    
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           + +T   ++        L L + + +  ++ G +      +AL  +Y +   ++ A Q F
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            E PE+++ SWNA+IS   QNG     +  F++M+     P+ V++ S+LSAC+  G + 
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALS 432

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G ++ + + +  +L        ++VD+  + G   EA +L   M  + + + W+++I  
Sbjct: 433 IG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITG 490

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             +H +     K A +LF  E L+   P
Sbjct: 491 YGLHGH----GKEALKLF-YEMLQSGIP 513



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +  L+  Y K G++  AR+LF+ MVD+  V+W  +I GY      +EA KLF +M 
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM- 507

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRC 123
              G  P  VTF ++L  CS     +E  ++ H+    +G+  +      +VD   +   
Sbjct: 508 LQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQ 567

Query: 124 LDLARRVFKEMP 135
           L  A    + MP
Sbjct: 568 LTNALEFIERMP 579


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/669 (38%), Positives = 377/669 (56%), Gaps = 32/669 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+L+ +Y K   L    R F+++P +D V++N LI G++  GL   A+K +   M+    
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
             +  T    L        ++LG+Q+H  V+K  F   + V + LLD+YSK  C+ +A+K
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 231 LFGEMP------------------------------EVDGVSYNVMITCYAWNEQYKESL 260
           +F  +                               E D VS++ MI   A N   KE++
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
           + FRE++       Q+PF ++L        +  GRQIH   I T     + V ++L+DMY
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
            KC     AK +F  +   + V WTAM+  Y Q G   EA+ +F++M R+ I  D  T  
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLG 372

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
             + A A ++SL  G Q H   I +G +  +   ++L+ +Y K G + D+ + F EM  R
Sbjct: 373 QAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR 432

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           + VSW A++SA AQ G A   ++ F+ MVQ G +PD V+L  V+SACS  GL+E+G +YF
Sbjct: 433 DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYF 492

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             M  +Y + P   HY+ M+D+  RSG  +EA   +  MPF PD I W++++++CR   N
Sbjct: 493 ELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGN 552

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
           LE  K AA+ L +++     A Y  +S+IYA  G+W+ V+Q+++ M+E+ VRK    SW+
Sbjct: 553 LEIGKWAAESLIELDP-HHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWI 611

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           + K K+H F+A+DE  P +++I  K+E L Q++   GYKPDTS   HD +E +K++ L  
Sbjct: 612 KWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNC 671

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSERLAIAF LI  P G PI V KNLR C DCH A K IS +TGREI VRD+ RFH FKD
Sbjct: 672 HSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 731

Query: 741 GFCSCRDFW 749
           G CSC DFW
Sbjct: 732 GTCSCGDFW 740



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 263/519 (50%), Gaps = 33/519 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  N  S N L+  Y KSG+L+     F  + DR  V+W +LI GYS       A K +
Sbjct: 64  IPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 123

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  D  S+   VT  T+L   S     +   Q+H  +IK G+ S L++ + L+D Y K
Sbjct: 124 NTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183

Query: 121 IRCLDLARRVFKEMP------------------------------QKDSVSFNALITGFA 150
           + C+  A++VF  +                               +KDSVS++A+I G A
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLA 243

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G+ +EAI+ F EM+  G K   + F + L A  GL  I  GRQ+HA +++TN  ++++
Sbjct: 244 QNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIY 303

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V +AL+D+Y K  C+  A+ +F  M + + VS+  M+  Y    +  E++K+F ++Q + 
Sbjct: 304 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG 363

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            D   +     +S  AN   L+ G Q H + I    I  + V+NSLV +Y KCG  +++ 
Sbjct: 364 IDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDST 423

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  ++    V WTAM+SAY Q G   EA+ LF +M +  +  D  T   ++ A +   
Sbjct: 424 RLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAG 483

Query: 391 SLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNAL 448
            +  G++    +I   G + +    S ++D++++SG +++A+     MP R + + W  L
Sbjct: 484 LVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTL 543

Query: 449 ISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSA 486
           +SAC   G+ +    + E +++   + P   +LLS + A
Sbjct: 544 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 582



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+FS + LL  Y+KSG L +  +TF+++P+R+ V+WN LI   + +G   A +K++  M+
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127

Query: 470 QS-GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY----ASMVDILC 524
           +        V+L+++L   S  G +  G Q    +     ++   E Y    + ++D+  
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQV-----IKLGFESYLLVGSPLLDMYS 182

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK-MEKLRDAAPY 583
           + GC  +A+K+   +  + + +M+++++        +E     A QLF+ MEK  D+  +
Sbjct: 183 KVGCISDAKKVFYGLD-DRNTVMYNTLMGGLLACGMIE----DALQLFRGMEK--DSVSW 235

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            AM    A  G  +   +  + M+  G++
Sbjct: 236 SAMIKGLAQNGMEKEAIECFREMKIEGLK 264


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/617 (40%), Positives = 379/617 (61%), Gaps = 2/617 (0%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           MPQ++ VS+ A+I+G ++     EAI+ F  M+  G  P+ F F++A+ A   L  I +G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +Q+H   +K      +FV + L D+YSK   + +A K+F EMP  D VS+  MI  Y+  
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            +++E+L  F+++        Q    + L         + GR +H+  +     S++ V 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           N+L DMY+K G  E A  +F   S   + V +T +I  YV+   +E+ L++F+E+ R  I
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ TF+S+++A A  A+L  G QLH+ V++  F  + F  S L+DMY K G L+ AIQ
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F E+ +   ++WN+L+S   Q+G  +  +K FE MV  G +P++++ +S+L+ CSH GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +EEGL YF SM + Y + P +EHY+ ++D+L R+G   EA++ + +MPFEP+   W S +
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            +CRIH + E  K AA++L K+E  +++   V +SNIYA   QWE V  V+  MR+  V+
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEP-KNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K+  YSWV++  K HVF A D  HP+ + I  K++ L+ ++K  GY P T     D D+ 
Sbjct: 480 KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDS 539

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
           +K + L  HSER+A+AFALI+ P G PI+V KNLR C DCH+AIK ISK+TGR+I VRD+
Sbjct: 540 MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 599

Query: 733 SRFHHFKDGFCSCRDFW 749
           SRFHHF DG CSC D+W
Sbjct: 600 SRFHHFTDGSCSCGDYW 616



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 229/457 (50%), Gaps = 6/457 (1%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  R  VSWT +I G SQ ++F EA + F  MR   G  P    F++ +  C+   +   
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRI-CGEVPTQFAFSSAIRACASLGSIEM 59

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
             Q+H   +KFG  S L + ++L D Y K   +  A +VF+EMP KD VS+ A+I G++K
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            G  EEA+  F +M             + L A   L     GR VH+ VVK  F  ++FV
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
            NAL D+YSK   +  A  +FG   E  + VSY  +I  Y   EQ ++ L +F EL+   
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + ++F FS+L+   AN+  L+ G Q+H Q +      +  V++ LVDMY KCG  E+A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           + F  +   + + W +++S + Q G  ++A+ +F  M    +  +  TF S+L   +   
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 391 SLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G    +S     G +      S ++D+  ++G LK+A +    MP E N   W + 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + AC  +GD +    + E +V+   +P +   L +LS
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVK--LEPKNSGALVLLS 454



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 171/346 (49%), Gaps = 4/346 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  A ++F  M  +  VSWT +I GYS+  +F EA   F  M  D     D   
Sbjct: 86  YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM-IDEEVTIDQHV 144

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-EM 134
             + L  C           VH+ ++K G+ S + + N+L D Y K   ++ A  VF  + 
Sbjct: 145 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 204

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             ++ VS+  LI G+ +    E+ + +FVE++  G +P++FTF++ + A    A +  G 
Sbjct: 205 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 264

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+HA V+K NF E+ FV++ L+D+Y K   + +A + F E+ +   +++N +++ +  + 
Sbjct: 265 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 324

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVA 313
             K+++K+F  +       +   F +LL+  ++   ++ G    ++       +   +  
Sbjct: 325 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 384

Query: 314 NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           + ++D+  + GR +EAKE    +    +   W + + A    G+ E
Sbjct: 385 SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++   +++L+  Y K G L  A + F+ + D T ++W  L+  + Q    ++A K+F  
Sbjct: 276 DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFER 335

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  D G  P+ +TF +LL+GCS      E
Sbjct: 336 M-VDRGVKPNAITFISLLTGCSHAGLVEE 363


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/744 (35%), Positives = 428/744 (57%), Gaps = 37/744 (4%)

Query: 16  YVKSG---NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
           Y +SG   +L  AR+LF  M +R   +W  +I  Y++ + + EA+ +F D     G  PD
Sbjct: 116 YARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIF-DRMLKIGVCPD 174

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             TFA+ L  C    + +   QVH+ +I  G+     + N+L+D Y K    +   +VF 
Sbjct: 175 NFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD 234

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLADI 190
           EM +++ V++N++I+  A+ G   +A+ LF+ MQ    G +P  FTF   L+      + 
Sbjct: 235 EMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRND 294

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             GRQ+HA +++ N  +N+ V   L+ +YS+   +  A+++F  M E +  S+N MI  Y
Sbjct: 295 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 354

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N + +E+L+LF+++Q        F  S++LS   +  D Q GR++H   +  T   E 
Sbjct: 355 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 414

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +   LVDMYAKCG  + A +++        +T  W ++++ Y  KG  +E+ N F+EM 
Sbjct: 415 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEML 474

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            ++I  D  T  +I+                  V+ +          AL+DMY+K G++ 
Sbjct: 475 ESDIEYDVLTMVTIVNL---------------LVLET----------ALVDMYSKCGAIT 509

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  M  +NIVSWNA+IS  +++G ++  L  +E+M + G  P+ V+ L++LSACS
Sbjct: 510 KARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 569

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+EEGL+ F SM + Y +  K EHY  MVD+L R+G  ++A++ + +MP EP+   W
Sbjct: 570 HTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTW 629

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CR+HK+++  + AA +LF+++  ++  PYV MSNIYA AG+W+ V  +++ M+ 
Sbjct: 630 GALLGACRVHKDMDMGRLAAQRLFELDP-QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKM 688

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +GV+K    SW+E+ S++ +F A  + HP+T EI   + +L  + K  GY PDTS  L +
Sbjct: 689 KGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQN 748

Query: 669 EDEEIKVESLKY---HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
             +  + E  +Y   HSERLA++  LI+ P+ S I V KNLR C DCH A K ISKITGR
Sbjct: 749 VKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGR 808

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I  RD++RFHHF++G CSC D+W
Sbjct: 809 RIIARDTNRFHHFENGKCSCGDYW 832



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 235/458 (51%), Gaps = 30/458 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N LI  Y K  +  +  ++F+ M +R  V+W  +I   +Q   F +A  LF+ M+
Sbjct: 209 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 268

Query: 65  -TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            ++ G  PD  TF TLL+ C+     N+  Q+HA +I+      +I+   LV  Y +   
Sbjct: 269 ESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGR 328

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ A+ +F  M ++++ S+N++I G+ + G  +EA++LF +MQ  G KP  F+ ++ LS+
Sbjct: 329 LNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 388

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS- 242
            V L+D   GR++H F+V+    E   +   L+D+Y+K   +  A K++ +  + D  + 
Sbjct: 389 CVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTA 448

Query: 243 -YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            +N ++  YA     KES   F E+       S   +  L  V                T
Sbjct: 449 LWNSILAGYANKGLKKESFNHFLEML-----ESDIEYDVLTMV----------------T 487

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           IV   + E     +LVDMY+KCG   +A+ +F N++  + V W AMIS Y + G  +EAL
Sbjct: 488 IVNLLVLET----ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 543

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDM 420
            L+ EM +  +  ++ TF +IL A +    +  G ++ + +       +     + ++D+
Sbjct: 544 ILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDL 603

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
             ++G L+DA +  ++MP E  + +W AL+ AC  + D
Sbjct: 604 LGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD 641



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 174/353 (49%), Gaps = 34/353 (9%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N +    L+  Y + G L  A+E+FN M +R A SW  +I GY Q  + +EA +LF  M
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 370

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + + G  PD  + +++LS C     + +  ++H  I++       I+   LVD Y K   
Sbjct: 371 QLN-GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 429

Query: 124 LDLARRVFKEMPQKD--SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
           +D A +V+ +  +KD  +  +N+++ G+A +GL +E+   F+EM               L
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEM---------------L 474

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            + +    + +   V+  V++T          AL+D+YSK   + +AR +F  M   + V
Sbjct: 475 ESDIEYDVLTMVTIVNLLVLET----------ALVDMYSKCGAITKARTVFDNMNGKNIV 524

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N MI+ Y+ +   KE+L L+ E+       ++  F  +LS  ++   ++ G +I T  
Sbjct: 525 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 584

Query: 302 IVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANL---SHISTVPWTAMISA 350
                I ++ +    +VD+  + GR E+AKE    +     +ST  W A++ A
Sbjct: 585 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVST--WGALLGA 635



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 64/326 (19%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD---AIQTFK 435
           ++S+++   +  S   GK +H+ +I +G+  + +  + +L +YA+SG L D   A + F+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------- 488
           EMPERN+ +WN +I A A+  D       F+ M++ G  PD+ +  S L  C        
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193

Query: 489 ----HCGLI------------------------EEGLQYFNSMTQKYKLRPKKEHYASMV 520
               H  LI                        E  L+ F+ M ++ ++      + S++
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT-----WNSII 248

Query: 521 DILCRSGCFDEAEKLMAQMP-----FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
               + G F++A  L  +M       +PD+  +++++  C   +N    ++    L +  
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
             ++      + ++Y+  G+     ++   M ER      AYSW    S +  +  N E 
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAER-----NAYSW---NSMIEGYQQNGE- 359

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPD 661
              T E  R    L ++M+  G KPD
Sbjct: 360 ---TQEALR----LFKQMQLNGIKPD 378


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/666 (38%), Positives = 395/666 (59%), Gaps = 7/666 (1%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI--RCLDLARRVFKEMPQKDSVSFNAL 145
           T  +L ++HA +IK        +  +L++S   +    +D A  +F+++ + DS ++N +
Sbjct: 36  TIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIM 95

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I GF  +    EAI LF EM     +P +FTF   L     L  ++ G Q+HA ++K  F
Sbjct: 96  IRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGF 155

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             + FV N L+ +Y+    V  AR++F EM E +  ++N M   Y  +  ++E +KLF E
Sbjct: 156 GSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHE 215

Query: 266 LQF--TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           +     RFD  +    ++L+      DL++G  I+             +  SLVDMYAKC
Sbjct: 216 MLELDIRFD--EVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC 273

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G+ + A+ +F  +     V W+AMIS Y Q     EAL+LF EM +ANI  ++ T  SIL
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            + A L +L  GK +H F+ +      V  G+AL+D YAK GS++ +I+ F +MP +N++
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SW  LI   A NG  +  L+ F  M++   +P+ V+ + VLSACSH GL++EG   F SM
Sbjct: 394 SWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           ++ + + P+ EHY  MVDIL R+G  +EA + +  MP +P+ ++W +++ SC++HKN+E 
Sbjct: 454 SRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEI 513

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            +++  QL  +E    +  Y+ +SNIYA  G+WE   +V+  M+E+G++K    S +EL 
Sbjct: 514 GEESLKQLIILEPTH-SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELD 572

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
             +H F A D +H Q+ EI   IE++M+++K  GY P+T+ A  D +E+ K  S+ +HSE
Sbjct: 573 GVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSE 632

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LAIAF LI +P G+ I + KNLR CTDCH A KL+SK+  REI VRD +RFHHFK+G C
Sbjct: 633 KLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSC 692

Query: 744 SCRDFW 749
           SC D+W
Sbjct: 693 SCNDYW 698



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 254/505 (50%), Gaps = 9/505 (1%)

Query: 7   VSTNMLISGYVK-SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           V+ N+L S  +    ++  A  +F  + +  + ++ I+I G++ K    EA  LF +M  
Sbjct: 58  VAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMH- 116

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           +    PD  TF  +L  CS     +E  Q+HA I+K G+ S   + N+L+  Y     ++
Sbjct: 117 ENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVE 176

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +ARRVF EM +++  ++N++  G+ K G  EE +KLF EM  L  +  + T  + L+A  
Sbjct: 177 VARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACG 236

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            LAD+ LG  ++ +V +     N  +  +L+D+Y+K   V  AR+LF +M   D V+++ 
Sbjct: 237 RLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSA 296

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI+ Y+   + +E+L LF E+Q    D ++    ++LS  A    L+ G+ +H       
Sbjct: 297 MISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKR 356

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
               V +  +L+D YAKCG  E + E+F  +   + + WT +I      G  ++AL  F 
Sbjct: 357 MKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFY 416

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKS 424
            M   N+  +  TF  +L A +    +  G+ L   + R  G    +     ++D+  ++
Sbjct: 417 LMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRA 476

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLL 481
           G +++A Q  K MP + N V W  L+++C  + + +   +S + ++  +  +  D + L 
Sbjct: 477 GLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLS 536

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQK 506
           ++ ++    G  E+ L+    M +K
Sbjct: 537 NIYAS---VGRWEDALKVRGEMKEK 558



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 2/233 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N      L+  Y K G + TAR LF+ M  R  V+W+ +I GYSQ ++ REA  LF +M+
Sbjct: 259 NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ 318

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                DP+ +T  ++LS C+          VH  I K      + +  +L+D Y K   +
Sbjct: 319 -KANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSV 377

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + +  VF +MP K+ +S+  LI G A  G  ++A++ F  M     +P+D TF   LSA 
Sbjct: 378 ESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC 437

Query: 185 VGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
                +  GR +   + +   +E  +     ++D+  +   + EA +    MP
Sbjct: 438 SHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMP 490


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/747 (37%), Positives = 443/747 (59%), Gaps = 13/747 (1%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+SG+ K+G++  A+ +F  M  R  VS   LI G  ++ +  EA +LF++M+     +P
Sbjct: 325  LVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNP 384

Query: 72   DYVTFATLLSGCSE----PDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDL 126
            +  ++  +L+   E     +   +  +VHA +I+ G  N+ + I N L++ Y K   ++ 
Sbjct: 385  N--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIND 442

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            A  VF+ M  KDSV++N++ITG  +     EA+K F EM+     PS+FT  +ALS+   
Sbjct: 443  ACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCAS 502

Query: 187  LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            L  I++G Q+H   +K     +V V+NALL LY +   V E +K F  M + D VS+N +
Sbjct: 503  LGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSL 562

Query: 247  ITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            I   A +E    E+++ F  +    +D ++  F T+L+ V++    ++G+QIH   +   
Sbjct: 563  IGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRN 622

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLF 364
              ++  + N+L+  Y KCG     + IF+ +S     V W +MIS Y+    L +A+++ 
Sbjct: 623  VAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMV 682

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
              M +     D  TFA++L A A +A+L  G ++H   +R+   S++  GSAL+DMYAK 
Sbjct: 683  WFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKC 742

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            G +  A + F+ MP RN+ SWN++IS  A++G    +L  F  M   G  PD V+ + VL
Sbjct: 743  GRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVL 802

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL+ EG  +F+SM++ Y L P+ EH++ MVD+L R G  ++ E  + QMP +P+
Sbjct: 803  SACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPN 862

Query: 545  EIMWSSVINS-CRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
             ++W +V+ + CR + +N    ++AA+ L +ME   +A  Y+ +SN+YA  G+W+ V++ 
Sbjct: 863  VLIWRTVLGACCRANGRNTALGRRAAEMLLEMEP-TNAVNYILLSNMYASGGKWDDVAKT 921

Query: 603  KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
            + AMR+  V+K    SWV +K  VHVF A D+ HP+ + I  K++ L  +M+  GY P+T
Sbjct: 922  RVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPET 981

Query: 663  SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              AL+D + E K E L YHSE++A+AF L   P   PI ++KNLR C DCH+A K IS+I
Sbjct: 982  RFALYDLEGESKEELLSYHSEKIAVAFVL-TRPSKMPIRILKNLRVCGDCHSAFKYISQI 1040

Query: 723  TGREITVRDSSRFHHFKDGFCSCRDFW 749
              R+I +RDS+RFHHF++G CSC DFW
Sbjct: 1041 VERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/586 (27%), Positives = 301/586 (51%), Gaps = 28/586 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y + G+L + R++F+ M  R  VSW+ LI GY++     EA +LF  M +DG  
Sbjct: 112 NTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFM 171

Query: 70  DPDYVTFATLLSGCSEPDTANEL--IQVHADIIKFGYNSILIICNSLVDSYCK-IRCLDL 126
            P++  F +++  C E         +Q+H  + K  Y + +   N L+  Y   +  +D 
Sbjct: 172 -PNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDY 230

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL----GFKPSDFTFAAALS 182
           ARR F  +  ++ VS N++I+ + + G    A  +F  MQ      G KP+++TF + +S
Sbjct: 231 ARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLIS 290

Query: 183 AGVGLAD--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   LA+  + L  Q+   V K+ F+ +++V +AL+  ++K   +  A+ +F +M   + 
Sbjct: 291 ATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNV 350

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI------- 293
           VS N +I      ++ +E+++LF E++    D  +   ++ + ++    +  +       
Sbjct: 351 VSLNGLIIGLVRQKRGEEAVELFMEMK----DSVELNPNSYMIILTAFPEFHVLENGKRK 406

Query: 294 GRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           G ++H   I +  + +++ + N L++MYAKCG   +A  +F  + +  +V W +MI+   
Sbjct: 407 GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLD 466

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           Q     EA+  F EM R  +     T  S L + A L  +S+G+QLH   ++ G   +V 
Sbjct: 467 QNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVS 526

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ-ATLKSFEDMVQS 471
             +ALL +Y + G +K+  + F  M + + VSWN+LI A A +  +    ++SF  M+++
Sbjct: 527 VSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRA 586

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G+ P+ V+ +++L+A S   L E G Q  +++  K  +        +++    + G    
Sbjct: 587 GWDPNRVTFITILAAVSSLSLHELGKQ-IHALVLKRNVAADTAIENALLACYGKCGDMGY 645

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL-FKMEK 576
            E + ++M    DE+ W+S+I S  IH   E   KA D + F M+K
Sbjct: 646 CENIFSRMSDRQDEVSWNSMI-SGYIHN--ELLPKAMDMVWFMMQK 688



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 250/475 (52%), Gaps = 17/475 (3%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H  + K G+ + L +CN+L++ Y ++  L   R+VF EMP ++ VS++ LI+G+ +  
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFV 211
           +  EA +LF +M   GF P+ + F + + A    G   +  G Q+H  + KT +V +V  
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 212 ANALLDLYSKHDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF----REL 266
           +N L+ +Y     +V+ AR+ F  +   + VS N MI+ Y        +  +F    +E+
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 267 QFTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
                  +++ F +L+S   +  +  L +  Q+ T+   +  + ++ V ++LV  +AK G
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAG 333

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
               AK IF  +S+ + V    +I   V++   EEA+ LF+EM + ++  +  ++  IL 
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILT 392

Query: 385 ASAELASLSLGK----QLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           A  E   L  GK    ++H+F+IRSG + + +  G+ L++MYAK G++ DA   F+ M  
Sbjct: 393 AFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDN 452

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++ V+WN++I+   QN      +K+F++M ++   P + +++S LS+C+  G I  G Q 
Sbjct: 453 KDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ- 511

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +    K  L        +++ +    G   E +K  + M  + D + W+S+I +
Sbjct: 512 LHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGA 565



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 2/104 (1%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           ++LH  + ++GF++++F  + L+++YA+ G L    + F EMP RN+VSW+ LIS   +N
Sbjct: 93  EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
                  + F  MV  G+ P+  +  SV+ AC  CG  E GL++
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG--EYGLKF 194


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/743 (36%), Positives = 418/743 (56%), Gaps = 3/743 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L   +   G +A  R+LFN +       + +LI G+S     + +  L+  +R   
Sbjct: 48  SITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXT 107

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              PD  T+A  +S  S  +     + +HA  I  G  S L + +++VD Y K    +LA
Sbjct: 108 NLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA 167

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  MP++D+V +N +I+GF++    E++I++FV+M  +G      T A  L+A   L
Sbjct: 168 RKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAEL 227

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +  LG  +     K     +V+V   L+ LYSK     + R LF ++ + D +SYN MI
Sbjct: 228 QEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMI 287

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + Y +N + + ++ LFREL  +    +      L+ V      LQ+ R I   ++    I
Sbjct: 288 SGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGII 347

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  V+ +L  +Y +    + A+++F      S   W AMIS Y Q G  + A++LF EM
Sbjct: 348 LQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM 407

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +S +  T  SIL A A+L +LS+GK +H  +      SNV+  +AL+DMYAK GS+
Sbjct: 408 M-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSI 466

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +A Q F  M ++N+V+WNA+I+    +G  +  LK F +M+QSG  P  V+ LS+L AC
Sbjct: 467 VEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYAC 526

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG + F+SM   Y  +P  EHYA MVDIL R+G    A + + +MP EP   +
Sbjct: 527 SHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAV 586

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C IHKN E A  A+ +LF+++   +   YV +SNIY+    +   + V++ ++
Sbjct: 587 WGALLGACMIHKNTEMANVASKRLFQLDP-ENVGYYVLLSNIYSTDRNFPKAASVRQVVK 645

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT-SCAL 666
           +R + K    + +E+  + +VFT+ D  HPQ   I   +E L  +M++ GY+ +T + AL
Sbjct: 646 KRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTAL 705

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD ++E K   +  HSE+LAIAF LI+T  G+ I ++KNLR C DCH A K ISKIT R 
Sbjct: 706 HDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERV 765

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD++RFHHFK+G CSC D+W
Sbjct: 766 IVVRDANRFHHFKNGICSCGDYW 788



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 252/508 (49%), Gaps = 12/508 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F TLL+  +   T ++L+Q+ A +I  G +  L     L   +  +  +   R++F ++ 
Sbjct: 17  FLTLLNNAT---TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS 73

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGR 194
           + D   FN LI GF+  GL + +I L+  ++     +P +FT+A A+SA   L D  +G 
Sbjct: 74  KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGV 133

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            +HA  +      N+FV +A++DLY K      ARK+F  MPE D V +N MI+ ++ N 
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            +++S+++F ++            +T+L+ VA   + ++G  I          S+V V  
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ +Y+KCG+  + + +F  +     + + AMIS Y      E A+ LF E+  +    
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           + +T   ++        L L + + +  ++ G +      +AL  +Y +   ++ A Q F
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            E PE+++ SWNA+IS   QNG     +  F++M+     P+ V++ S+LSAC+  G + 
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALS 432

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G ++ + + +  +L        ++VD+  + G   EA +L   M  + + + W+++I  
Sbjct: 433 IG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITG 490

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             +H +     K A +LF  E L+   P
Sbjct: 491 YGLHGH----GKEALKLF-YEMLQSGIP 513



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +  L+  Y K G++  AR+LF+ MVD+  V+W  +I GY      +EA KLF +M 
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM- 507

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
              G  P  VTF ++L  CS     +E
Sbjct: 508 LQSGIPPTGVTFLSILYACSHSGLVSE 534


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/746 (36%), Positives = 417/746 (55%), Gaps = 62/746 (8%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           ++ N  I+ Y + G + +AR +F+ M D+  VSW  ++ GY Q N+ REA  LF  M   
Sbjct: 17  IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM--- 73

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
               P+  T +                                  N L+  Y K R +  
Sbjct: 74  ----PERNTVS---------------------------------WNGLISGYVKNRMVSE 96

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR+ F  MP+++ VS+ A++ G+ +EGL  EA  LF +M     + +  ++   L   + 
Sbjct: 97  ARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP----EKNVVSWTVMLGGLIQ 152

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +  I   R +   +     V++V     ++  Y +   + EAR+LF EMP  + +S+  M
Sbjct: 153 VRRIDEARGLFDIMP----VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y  N Q   + KLF  +          P    +S  A  +    G +I   + +  A
Sbjct: 209 ISGYVQNGQVDVARKLFEVM----------PEKNEVSWTAMLMGYTQGGRIEEASELFDA 258

Query: 307 --ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             +  V   N+++  + + G   +A+++F  +       W+AMI  Y +KG   EALNLF
Sbjct: 259 MPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLF 318

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M R  + ++  +  S+L   A LASL  G+Q+H+ +++S F S+VF  S L+ MY K 
Sbjct: 319 ALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKC 378

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A Q F     ++IV WN++I+  AQ+G  +  L+ F +M  SG   D V+ + VL
Sbjct: 379 GDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVL 438

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACS+ G ++EGL+ F SM  KY + PK EHYA MVD+L R+G  ++A  L+ +MP E D
Sbjct: 439 SACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEAD 498

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            I+W +++ +CR H N+  A+ AA +L ++E  ++A PY+ +SNIYA  G+W  V+++++
Sbjct: 499 AIIWGALLGACRTHMNMNLAEVAAKKLLQLEP-KNAGPYILLSNIYASKGRWGDVAELRR 557

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTAN-DELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            MR + V K    SW+E++ +VH+FT      HP+ + I + +E L   +++ GY PD+S
Sbjct: 558 NMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSS 617

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD DEE KV SL +HSERLA+AF L+  PEG PI VMKNLR C DCH+AIKLI+KIT
Sbjct: 618 FVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKIT 677

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GREI +RD++RFHHFKDGFCSCRD+W
Sbjct: 678 GREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 240/462 (51%), Gaps = 35/462 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NTVS N LISGYVK+  ++ AR+ F++M +R  VSWT ++ GY Q+    EA  LF
Sbjct: 73  MPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLF 132

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN-----SLV 115
             M      + + V++  +L G         LIQV       G   I+ + +     +++
Sbjct: 133 WQM-----PEKNVVSWTVMLGG---------LIQVRRIDEARGLFDIMPVKDVVARTNMI 178

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             YC+   L  AR +F EMP+++ +S+  +I+G+ + G  + A KLF  M     + ++ 
Sbjct: 179 SGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEV 234

Query: 176 TFAAALSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           ++ A L        I    ++  A  VK      V   NA++  + ++  V +AR++F +
Sbjct: 235 SWTAMLMGYTQGGRIEEASELFDAMPVKA-----VVACNAMILGFGQNGEVAKARQVFDQ 289

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQI 293
           + E D  +++ MI  Y       E+L LF  +Q     +S FP   ++LSV A+   L  
Sbjct: 290 IREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGV-QSNFPSLISVLSVCASLASLDH 348

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           GRQ+H + + +   S+V VA+ L+ MY KCG   +A++IF   S    V W ++I+ Y Q
Sbjct: 349 GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQ 408

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNV 411
            G +EEAL +F EMC + ++ D  TF  +L A +    +  G ++    ++S ++     
Sbjct: 409 HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFE-SMKSKYLVEPKT 467

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
              + ++D+  ++G + DA+   ++MP E + + W AL+ AC
Sbjct: 468 EHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGAC 509



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 217/507 (42%), Gaps = 61/507 (12%)

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
            S+ I  NS +  Y +I  ++ ARRVF EMP K  VS+N+++ G+ +     EA  LF +
Sbjct: 13  TSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDK 72

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M                                          N    N L+  Y K+  
Sbjct: 73  MPE---------------------------------------RNTVSWNGLISGYVKNRM 93

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           V EARK F  MPE + VS+  M+  Y       E+  LF ++     +++   ++ +L  
Sbjct: 94  VSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP----EKNVVSWTVMLGG 149

Query: 285 VANKLDLQIGRQIHTQTIV-TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
           +     +Q+ R    + +     + +V    +++  Y + GR  EA+E+F  +   + + 
Sbjct: 150 L-----IQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS 204

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WT MIS YVQ G ++ A  LF  M   N    + ++ ++L    +   +    +L   + 
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVMPEKN----EVSWTAMLMGYTQGGRIEEASELFDAMP 260

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
               +  V + +A++  + ++G +  A Q F ++ E++  +W+A+I    + G     L 
Sbjct: 261 ----VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALN 316

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F  M + G Q +  SL+SVLS C+    ++ G Q    +    K +   + + + V I 
Sbjct: 317 LFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV---KSQFDSDVFVASVLIT 373

Query: 524 CRSGCFDEAEKLMAQMPFEP-DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
               C D  +       F P D +MW+S+I     H  +E A +   ++       D   
Sbjct: 374 MYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVT 433

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRER 609
           +V + +  +  G+ +   ++ ++M+ +
Sbjct: 434 FVGVLSACSYTGKVKEGLEIFESMKSK 460


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/707 (36%), Positives = 404/707 (57%), Gaps = 3/707 (0%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           ++ GY++ +    A   F  M+ D    P    F  LL  C +        ++H  +I  
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDS-VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G++  L     +V+ Y K R ++ A  +F  MP++D V +N +I+G+A+ G  + A+ L 
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
           + M   G +P   T  + L A      + +G  VH +V++  F   V V+ AL+D+YSK 
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             V  AR +F  M     VS+N MI  Y  +   + ++ +F+++       +       L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A+  DL+ G+ +H         S+V V NSL+ MY+KC R + A +IF NL + + V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W AMI  Y Q G + EALN F EM   NI  D  T  S++ A AEL+     K +H  V
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           IR     NVF  +AL+DMYAK G++  A + F  M  R++++WNA+I     +G  + ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           + F++M +   +P+ ++ L  LSACSH GL+EEGL +F SM + Y + P  +HY +MVD+
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R+G  ++A   + +MP +P   ++ +++ +C+IHKN++  +KAA ++FK+    D   
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNP-DDGGY 538

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           +V ++NIYA A  W  V++V+  M + G++K    S VE+ ++VH F +    HPQ+ +I
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKI 598

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
              +E L+ E++  GY PDT+ ++HD ++++KV+ L  HSE+LAIAF L+NT  G+PI +
Sbjct: 599 YSYLETLVDEIRAAGYVPDTN-SIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHI 657

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            KNLR C DCH A K IS +TGREI VRD  RFH FKDG CSC D+W
Sbjct: 658 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 218/453 (48%), Gaps = 9/453 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  +   +++ Y K   +  A  +F+ M +R  V W  +I GY+Q N F +   + V   
Sbjct: 64  NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ-NGFAKVALMLVLRM 122

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           ++ G  PD +T  ++L   ++       + VH  +++ G+ S++ +  +LVD Y K   +
Sbjct: 123 SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSV 182

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            +AR +F  M  +  VS+N++I G+ + G  E A+ +F +M   G +P++ T   AL A 
Sbjct: 183 SIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+  G+ VH  V +     +V V N+L+ +YSK   V  A  +F  +     VS+N
Sbjct: 243 ADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWN 302

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---IHTQT 301
            MI  YA N    E+L  F E+Q        F   T++SV+    +L I RQ   IH   
Sbjct: 303 AMILGYAQNGCVNEALNAFCEMQSRNIKPDSF---TMVSVIPALAELSIPRQAKWIHGLV 359

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I       V V  +LVDMYAKCG    A+++F  ++    + W AMI  Y   G  + ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDM 420
            LF EM +  I  +  TF   L A +    +  G      + +  G    +    A++D+
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 421 YAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
             ++G L  A    ++MP +  I  + A++ AC
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGAC 512



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 45/355 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M ++  VS N +I GYV+SG+   A  +F  M+D                          
Sbjct: 192 MDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDE------------------------- 226

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                  G  P  VT    L  C++         VH  + +   +S + + NSL+  Y K
Sbjct: 227 -------GVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSK 279

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +D+A  +FK +  K  VS+NA+I G+A+ G   EA+  F EMQ    KP  FT  + 
Sbjct: 280 CKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSV 339

Query: 181 LSAGVGLADIALGRQ---VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           + A   LA++++ RQ   +H  V++    +NVFV  AL+D+Y+K   +  ARKLF  M  
Sbjct: 340 IPA---LAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNA 396

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              +++N MI  Y  +   K S++LF+E++      +   F   LS  ++   ++ G   
Sbjct: 397 RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCF 456

Query: 298 HTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                    I   +    ++VD+  + GR  +A +       I  +P    I+ Y
Sbjct: 457 FESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDF------IQKMPIKPGITVY 505



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 2/150 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N      L+  Y K G + TAR+LF+ M  R  ++W  +I GY      + + +LF +
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+  G   P+ +TF   LS CS      E +     + K +G    +    ++VD   + 
Sbjct: 425 MKK-GTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRA 483

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAK 151
             L+ A    ++MP K  ++    + G  K
Sbjct: 484 GRLNQAWDFIQKMPIKPGITVYGAMLGACK 513


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/749 (34%), Positives = 422/749 (56%), Gaps = 12/749 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN   +  L++ Y   GN+A AR  F+ + +R   +W ++I GY +     E  + F   
Sbjct: 84  QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PDY TF ++L  C      N   ++H   +KFG+   + +  SL+  Y + + 
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGN---KIHCLALKFGFMWDVYVAASLIHLYSRYKA 200

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALS 182
           +  AR +F EMP +D  S+NA+I+G+ + G  +EA+ L       G +  D  T  + LS
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLS 255

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A     D   G  +H++ +K      +FV+N L+DLY++   + + +K+F  M   D +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  Y  NEQ   ++ LF+E++ +R         +L S+++   D++  R +   T+
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375

Query: 303 VTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                + ++ + N++V MYAK G  + A+ +F  L +   + W  +IS Y Q G   EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435

Query: 362 NLF-IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            ++ I      I+A+Q T+ S+L A ++  +L  G +LH  ++++G   +VF  ++L DM
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G L+DA+  F ++P  N V WN LI+    +G  +  +  F++M+  G +PD ++ 
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +++LSACSH GL++EG   F  M   Y + P  +HY  MVD+  R+G  + A K +  M 
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +PD  +W +++++CR+H N++  K A++ LF++E       +V +SN+YA AG+WE V 
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHVGYHVLLSNMYASAGKWEGVD 674

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++     +G+RK   +S +E+ +KV VF   ++ HP   E+ R++  L  ++K  GY P
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D    L D +++ K   L  HSERLAIAFALI TP  + I + KNLR C DCH+  K IS
Sbjct: 735 DHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFIS 794

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KIT REI VRDS+RFHHFK+G CSC D+W
Sbjct: 795 KITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 155/553 (28%), Positives = 262/553 (47%), Gaps = 20/553 (3%)

Query: 52  QFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
           +F  +     D   +G    +     TL   C+   +A  L   HA ++       + I 
Sbjct: 33  EFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCL---HARLVVSKQIQNVCIS 89

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
             LV+ YC +  + LAR  F  +  +D  ++N +I+G+ + G + E I+ F + M   G 
Sbjct: 90  AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            P   TF + L A   + D   G ++H   +K  F+ +V+VA +L+ LYS++  V  AR 
Sbjct: 150 TPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           LF EMP  D  S+N MI+ Y  +   KE+L L   L+            +LLS      D
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
              G  IH+ +I     SE+ V+N L+D+YA+ GR  + +++F  +     + W ++I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMS 409
           Y        A++LF EM  + I  D  T  S+    ++L  +   + +  F +R G F+ 
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           ++  G+A++ MYAK G +  A   F  +P  +++SWN +IS  AQNG A   ++ +  M 
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442

Query: 470 QSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           + G    +  + +SVL ACS  G + +G++    +  K  L        S+ D+  + G 
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGR 501

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA----KKAADQLFKMEKLRDAAPYV 584
            ++A  L  Q+P   + + W+++I     H + E A    K+  D+  K + +       
Sbjct: 502 LEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560

Query: 585 AMSNIYAV-AGQW 596
           A S+   V  GQW
Sbjct: 561 ACSHSGLVDEGQW 573



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 250/528 (47%), Gaps = 53/528 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N +ISGY +SGN                                +EA  L 
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNA-------------------------------KEALTL- 238

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
               ++G    D VT  +LLS C+E    N  + +H+  IK G  S L + N L+D Y +
Sbjct: 239 ----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE---AIKLFVEMQHLGFKPSDFTF 177
              L   ++VF  M  +D +S+N++I  +    LNE+   AI LF EM+    +P   T 
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYE---LNEQPLRAISLFQEMRLSRIQPDCLTL 351

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +  S    L DI   R V  F ++   F+E++ + NA++ +Y+K   V  AR +F  +P
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
             D +S+N +I+ YA N    E+++++  + +      +Q  + ++L   +    L+ G 
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           ++H + +      +V V  SL DMY KCGR E+A  +F  +  +++VPW  +I+ +   G
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFSG 414
           + E+A+ LF EM    +  D  TF ++L A +    +  G+     +    G   ++   
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591

Query: 415 SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             ++DMY ++G L+ A++  K M   P+ +I  W AL+SAC  +G+      + E + + 
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSACRVHGNVDLGKIASEHLFE- 648

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             +P+ V    +LS         EG+    S+     LR K   ++SM
Sbjct: 649 -VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR-KTPGWSSM 694


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/777 (33%), Positives = 443/777 (57%), Gaps = 40/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K G++A+  ++F  M  R  V+W+ +I  Y+  N   +AF  F  M+ D   
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK-DANI 175

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+ +TF ++L  C+      +  ++H  +   G  + + +  +L+  Y K   + LA  
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F++M +++ VS+ A+I   A+     EA +L+ +M   G  P+  TF + L++      
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR++H+ + +     +V VANAL+ +Y K +C+ +AR+ F  M + D +S++ MI  
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355

Query: 250 YAWNE-QYKESL-KLFRELQFTRFDRSQFP----FSTLLSVVANKLDLQIGRQIHTQTIV 303
           YA +  Q KESL ++F+ L+  R +   FP    F ++L   +    L+ GRQIH +   
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMRRE-GVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S+  +  ++ +MYAKCG   EA+++F+ + + + V W ++++ Y++ G+L  A  +
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKV 474

Query: 364 FIEMCRANI-------------------------------SADQATFASILRASAELASL 392
           F EM   N+                                 D+ T  SIL A   L++L
Sbjct: 475 FSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSAL 534

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK +H+  ++ G  S+    ++L+ MY+K G + +A   F ++  R+ V+WNA+++  
Sbjct: 535 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGY 594

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            Q+G     +  F+ M++    P+ ++  +V+SAC   GL++EG + F  M + ++++P 
Sbjct: 595 GQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPG 654

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           K+HY  MVD+L R+G   EAE+ + +MP EPD  +W +++ +C+ H N++ A+ AA  + 
Sbjct: 655 KQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHIL 714

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           ++E   +A+ YV +SNIYA AG+W+  ++V+K M ++G++K    S +E+  ++H F A 
Sbjct: 715 RLEP-SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAE 773

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HP+ + I  ++E L +EMK+ GY PD    LHD DE  K  +L +HSE+LAIA+ L+
Sbjct: 774 DCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLL 833

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            TP G+PI +MKNLR C DCH A K ISKI  REI  RD++RFH+FK+G CSC DFW
Sbjct: 834 KTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 263/569 (46%), Gaps = 41/569 (7%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T+  ++  C++     +   VH  + + G    + + NSL++ Y K   +    +VF+ M
Sbjct: 80  TYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRM 139

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             +D V+++++I  +A      +A   F  M+    +P+  TF + L A    + +   R
Sbjct: 140 TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAR 199

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H  V  +    +V VA AL+ +YSK   +  A ++F +M E + VS+  +I   A + 
Sbjct: 200 EIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHR 259

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  E+ +L+ ++       +   F +LL+       L  GR+IH+        ++V VAN
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG-----NLEEALNLFIEMCR 369
           +L+ MY KC   ++A+E F  +S    + W+AMI+ Y Q G     +L+E   L   M R
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-------------------- 409
             +  ++ TF SIL+A +   +L  G+Q+H+ + + GF S                    
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYE 439

Query: 410 -----------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
                      NV + ++LL MY K G L  A + F EM  RN+VSWN +I+  AQ+GD 
Sbjct: 440 AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDI 499

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
               +    M   G+QPD V+++S+L AC     +E G +  ++   K  L        S
Sbjct: 500 AKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLVHAEAVKLGLESDTVVATS 558

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           ++ +  + G   EA  +  ++    D + W++++     H       +A D   +M K R
Sbjct: 559 LIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAMLAGYGQHG---IGPEAVDLFKRMLKER 614

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
                +  + + +  G+   V + ++  R
Sbjct: 615 VPPNEITFTAVISACGRAGLVQEGREIFR 643



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 242/480 (50%), Gaps = 13/480 (2%)

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
             K G  +EAI+L   ++  G   +  T+   +     L     G+ VH  + +     +
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +++ N+L++ YSK   V    ++F  M   D V+++ MI  YA N    ++   F  ++ 
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
              + ++  F ++L    N   L+  R+IHT    +   ++V VA +L+ MY+KCG    
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A EIF  +   + V WTA+I A  Q   L EA  L+ +M +A IS +  TF S+L +   
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             +L+ G+++HS +   G  ++V   +AL+ MY K   ++DA +TF  M +R+++SW+A+
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352

Query: 449 ISACAQNG--DAQATLKSF---EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           I+  AQ+G  D ++  + F   E M + G  P+ V+ +S+L ACS  G +E+G Q  ++ 
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ-IHAE 411

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             K      +    ++ ++  + G   EAE++ ++M    + + W+S++       +L  
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDL-- 468

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR--KVTAYSWVE 621
              +A+++F     R+   +  M   YA +G    V ++  +M+  G +  +VT  S +E
Sbjct: 469 --TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 182/394 (46%), Gaps = 39/394 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-----KNQFREAFKL 59
           + V  N LI+ Y K   +  ARE F+ M  R  +SW+ +I GY+Q     K    E F+L
Sbjct: 314 DVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQL 373

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
              MR + G  P+ VTF ++L  CS      +  Q+HA+I K G+ S   +  ++ + Y 
Sbjct: 374 LERMRRE-GVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYA 432

Query: 120 K-----------------------------IRCLDL--ARRVFKEMPQKDSVSFNALITG 148
           K                             I+C DL  A +VF EM  ++ VS+N +I G
Sbjct: 433 KCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAG 492

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +A+ G   +  +L   M+  GF+P   T  + L A   L+ +  G+ VHA  VK     +
Sbjct: 493 YAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESD 552

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
             VA +L+ +YSK   V EAR +F ++   D V++N M+  Y  +    E++ LF+ +  
Sbjct: 553 TVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLK 612

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA-NSLVDMYAKCGRFE 327
            R   ++  F+ ++S       +Q GR+I         +   K     +VD+  + GR +
Sbjct: 613 ERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQ 672

Query: 328 EAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
           EA+E    +     +  W A++ A     N++ A
Sbjct: 673 EAEEFIQRMPCEPDISVWHALLGACKSHDNVQLA 706



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 1/196 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+N V+   L++ Y+K G+L +A ++F+ M  R  VSW ++I GY+Q     + F+L 
Sbjct: 447 MENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELL 506

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +G   PD VT  ++L  C           VHA+ +K G  S  ++  SL+  Y K
Sbjct: 507 SSMKVEG-FQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSK 565

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF ++  +D+V++NA++ G+ + G+  EA+ LF  M      P++ TF A 
Sbjct: 566 CGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAV 625

Query: 181 LSAGVGLADIALGRQV 196
           +SA      +  GR++
Sbjct: 626 ISACGRAGLVQEGREI 641


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/777 (33%), Positives = 443/777 (57%), Gaps = 40/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K  ++A+A ++F  M  R  V+W+ +I  Y+  N   +AF  F  M TD   
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM-TDANI 153

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+ +TF ++L  C+      +  ++H  +   G  + + +  +L+  Y K   + +A  
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M +++ VS+ A+I   A+     EA +L+ +M   G  P+  TF + L++      
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR++H+ + +     ++ VANAL+ +Y K + V EAR++F  M + D +S++ MI  
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333

Query: 250 YAWNE-QYKESL-KLFRELQFTRFDRSQFP----FSTLLSVVANKLDLQIGRQIHTQTIV 303
           YA +  + KES+ ++F+ L+  R +   FP    F ++L        L+ GRQIH +   
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMRRE-GVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  +  ++ +MYAKCG   EA+++F+ +++ + V WT+ +S Y++ G+L  A  +
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452

Query: 364 FIEMCRANISA-------------------------------DQATFASILRASAELASL 392
           F EM   N+ +                               D+ T  +IL A   LA L
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK +H+  ++ G  S+    ++L+ MY+K G + +A   F +M  R+ V+WNA+++  
Sbjct: 513 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY 572

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            Q+GD    +  F+ M++    P+ ++L +V+SACS  GL++EG + F  M + +K+ P+
Sbjct: 573 GQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPR 632

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           K+HY  MVD+L R+G   EAE+ +  MP EPD  +W +++ +C+ H N++ A++AA  + 
Sbjct: 633 KQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHIL 692

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           ++E    A+ Y+ +SNIYA AG+W+  ++V++ M +RG++K    S +E+  ++H F A 
Sbjct: 693 ELEP-SYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAE 751

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HP+ + I  ++E L +EMK+ GY PD    LHD D+  K ++L +HSE+LAIA+ L+
Sbjct: 752 DCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLL 811

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            TP G+PI +MKNLR C DCH A K ISKI  REI  RD++RFH+F +G CSC DFW
Sbjct: 812 KTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/624 (25%), Positives = 283/624 (45%), Gaps = 47/624 (7%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G  +T +EL           W +   G     + REA +L   ++  G    +  T+  +
Sbjct: 9   GFASTGKELDGPTSVSGGEVWRLCKAG-----RLREAIQLLGIIKQRG-LLVNSNTYGCV 62

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +  C++     +   VH  + + G    + + NSL++ Y K   +  A +VF+ M  +D 
Sbjct: 63  IEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDV 122

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           V+++++I  +A      +A   F  M     +P+  TF + L A    + +  GR++H  
Sbjct: 123 VTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTI 182

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           V       +V VA AL+ +YSK   +  A ++F +M E + VS+  +I   A + +  E+
Sbjct: 183 VKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEA 242

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +L+ ++       +   F +LL+       L  GR+IH+        +++ VAN+L+ M
Sbjct: 243 FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITM 302

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG-----NLEEALNLFIEMCRANISA 374
           Y KC   +EA+EIF  +S    + W+AMI+ Y Q G     +++E   L   M R  +  
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP 362

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFM-------------------------- 408
           ++ TF SILRA     +L  G+Q+H+ + + GF                           
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVF 422

Query: 409 -----SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
                 NV + ++ L MY K G L  A + F EMP RN+VSWN +I+  AQNGD     +
Sbjct: 423 SKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFE 482

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
               M   G+QPD V+++++L AC     +E G +  ++   K  L        S++ + 
Sbjct: 483 LLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGMY 541

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            + G   EA  +  +M    D + W++++     H +     +A D   +M K R +   
Sbjct: 542 SKCGQVAEARTVFDKMS-NRDTVAWNAMLAGYGQHGD---GLEAVDLFKRMLKERVSPNE 597

Query: 584 VAMSNIYAVAGQWESVSQVKKAMR 607
           + ++ + +   +   V + ++  R
Sbjct: 598 ITLTAVISACSRAGLVQEGREIFR 621



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 248/497 (49%), Gaps = 14/497 (2%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           KE+    SVS    +    K G   EAI+L   ++  G   +  T+   +          
Sbjct: 15  KELDGPTSVS-GGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFE 73

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ VH  + +     ++++ N+L++ YSK + V  A ++F  M   D V+++ MI  YA
Sbjct: 74  DGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYA 133

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    ++   F  +     + ++  F ++L    N   L+ GR+IHT        ++V 
Sbjct: 134 GNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVA 193

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VA +L+ MY+KCG    A E+F  ++  + V WTA+I A  Q   L EA  L+ +M +A 
Sbjct: 194 VATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG 253

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           IS +  TF S+L +     +L+ G+++HS +   G  +++   +AL+ MY K  S+++A 
Sbjct: 254 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAR 313

Query: 432 QTFKEMPERNIVSWNALISACAQNG--DAQATLKSF---EDMVQSGYQPDSVSLLSVLSA 486
           + F  M +R+++SW+A+I+  AQ+G  D ++  + F   E M + G  P+ V+ +S+L A
Sbjct: 314 EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRA 373

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+  G +E+G Q    ++ K      +    ++ ++  + G   EAE++ ++M    + +
Sbjct: 374 CTAHGALEQGRQIHAELS-KVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVV 431

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            W+S ++      +L     +A+++F     R+   +  M   YA  G    V ++  +M
Sbjct: 432 AWTSFLSMYIKCGDL----SSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSM 487

Query: 607 RERGVR--KVTAYSWVE 621
           +  G +  +VT  + +E
Sbjct: 488 KAEGFQPDRVTVITILE 504



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 185/394 (46%), Gaps = 39/394 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-----KNQFREAFKL 59
           + +  N LI+ Y K  ++  ARE+F+ M  R  +SW+ +I GY+Q     K    E F+L
Sbjct: 292 DMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQL 351

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
              MR + G  P+ VTF ++L  C+      +  Q+HA++ K G+     +  ++ + Y 
Sbjct: 352 LERMRRE-GVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYA 410

Query: 120 K-----------------------------IRCLDL--ARRVFKEMPQKDSVSFNALITG 148
           K                             I+C DL  A +VF EMP ++ VS+N +I G
Sbjct: 411 KCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAG 470

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +A+ G   +  +L   M+  GF+P   T    L A   LA +  G+ VHA  VK     +
Sbjct: 471 YAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESD 530

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
             VA +L+ +YSK   V EAR +F +M   D V++N M+  Y  +    E++ LF+ +  
Sbjct: 531 TVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLK 590

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA-NSLVDMYAKCGRFE 327
            R   ++   + ++S  +    +Q GR+I         ++  K     +VD+  + GR +
Sbjct: 591 ERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQ 650

Query: 328 EAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
           EA+E   ++     +  W A++ A     N++ A
Sbjct: 651 EAEEFIQSMPCEPDISVWHALLGACKSHNNVQLA 684



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+N V+    +S Y+K G+L++A ++F+ M  R  VSW ++I GY+Q     + F+L 
Sbjct: 425 MANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELL 484

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ + G  PD VT  T+L  C           VHA+ +K G  S  ++  SL+  Y K
Sbjct: 485 SSMKAE-GFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSK 543

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF +M  +D+V++NA++ G+ + G   EA+ LF  M      P++ T  A 
Sbjct: 544 CGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAV 603

Query: 181 LSAGVGLADIALGRQV 196
           +SA      +  GR++
Sbjct: 604 ISACSRAGLVQEGREI 619


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 418/739 (56%), Gaps = 6/739 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  ++ +V+ GNL  A  +F  M +R   SW +L+GGY+++  F EA  L+  M   GG 
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 70  DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            PD  TF  +L  C   PD A    +VH  ++++GY   + + N+L+  Y K   +  AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGK-EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  MP++D +S+NA+I+G+ + G+  E ++LF  M+ L   P   T  + +SA   L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D  LGR +HA+V+ T F  ++ V N+L  +Y       EA KLF  M   D VS+  MI+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y +N    +++  +R +        +   + +LS  A   DL  G ++H   I    IS
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V VAN+L++MY+KC   ++A +IF N+   + + WT++I+         EAL +F+   
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  +  +  T  + L A A + +L  GK++H+ V+R+G   + F  +ALLDMY + G + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F    ++++ SWN L++  ++ G     ++ F+ MV+S  +PD ++ +S+L  CS
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              ++ +GL YF+ M + Y + P  +HYA +VD+L R+G   EA K + +MP  PD  +W
Sbjct: 610 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++N+CRIH  ++  + +A  +F+++K +    Y+ + N+YA  G+W  V++V++ M+E
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDK-KSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            G+      SWVE+K KVH F ++D+ HPQT EI   +E   ++M + G    +  +  D
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD 787

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           E E  + E    HSER AIAF LINT  G PI V KNL  C +CH  +K ISK   REI+
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREIS 847

Query: 729 VRDSSRFHHFKDGFCSCRD 747
           VRD+  FHHFKDG CSC D
Sbjct: 848 VRDAEHFHHFKDGECSCGD 866


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/689 (37%), Positives = 393/689 (57%), Gaps = 67/689 (9%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF EMP++D+VS+  ++ G  + G   EAIK  ++M   GF P+ FT    LS+   
Sbjct: 11  ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAV 70

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------HDCVVE------------- 227
               A+GR+VH+FVVK      V VAN++L++Y K         V E             
Sbjct: 71  TQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAM 130

Query: 228 ------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF-RELQFTRFDRS 274
                       A  LF  MP+   VS+N MI  Y  N    ++LKLF R L  +     
Sbjct: 131 VSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 190

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR--------- 325
           +F  +++LS  AN  +++IG+Q+H   + T      +V N+L+  YAK G          
Sbjct: 191 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 250

Query: 326 ------------------------FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                                    E A+E+F  +++   V WTAMI  Y Q G  +EA+
Sbjct: 251 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 310

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           +LF  M       +  T A++L   A LA L  GKQ+H   IRS    +    +A++ MY
Sbjct: 311 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMY 370

Query: 422 AKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           A+SGS   A + F ++  R   ++W ++I A AQ+G  +  +  FE+M+++G +PD ++ 
Sbjct: 371 ARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITY 430

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + VLSACSH G + EG +Y++ +  ++++ P+  HYA MVD+L R+G F EA++ + +MP
Sbjct: 431 VGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP 490

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD I W S++++CR+HKN E A+ AA++L  ++   ++  Y A++N+Y+  G+W   +
Sbjct: 491 VEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDP-NNSGAYSAIANVYSACGRWSDAA 549

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           ++ KA +E+ VRK T +SW  ++SK+HVF A+D +HPQ + +      + +E+K  G+ P
Sbjct: 550 RIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVP 609

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           D    LHD D+E+K E L  HSE+LAIAF LI+TPE + + VMKNLR C DCHAAIK IS
Sbjct: 610 DLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAIS 669

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K+T REI VRD++RFHHF+DG CSC+D+W
Sbjct: 670 KVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 273/560 (48%), Gaps = 72/560 (12%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           + KSG LA AR +F  M +R AVSWT+++ G ++  +F EA K  +DM  DG + P   T
Sbjct: 2   FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT-PTQFT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK--------------- 120
              +LS C+         +VH+ ++K G  S + + NS+++ Y K               
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 121 IRC----------------LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
           +R                 +DLA  +F+ MP +  VS+NA+I G+ + GL+ +A+KLF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 165 MQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
           M H     P +FT  + LSA   L ++ +G+QVHA++++T    N  V NAL+  Y+K  
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 224 CVVEARK---------------------------------LFGEMPEVDGVSYNVMITCY 250
            V  AR+                                 +FG M   D V++  MI  Y
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N +  E++ LFR +     + + +  + +LSV A+   L  G+QIH + I +      
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            V+N+++ MYA+ G F  A+ +F  +     T+ WT+MI A  Q G  EEA+ LF EM R
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLK 428
           A +  D+ T+  +L A +    ++ GK+ +  +     ++   S  A ++D+ A++G   
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +A +  + MP E + ++W +L+SAC  + +A+    + E ++     P++    S ++  
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANV 538

Query: 488 -SHCGLIEEGLQYFNSMTQK 506
            S CG   +  + + +  +K
Sbjct: 539 YSACGRWSDAARIWKARKEK 558



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 203/442 (45%), Gaps = 66/442 (14%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +++K   + +AR +F EMPE D VS+ VM+       ++ E++K   ++    F  +QF 
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC-------------- 323
            + +LS  A      +GR++H+  +     S V VANS+++MY KC              
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 324 -----------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                            GR + A+ +F ++   S V W AMI+ Y Q G   +AL LF  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 367 MCR-ANISADQATFASILRASAELASLSLGKQLHSFVIR-------------------SG 406
           M   ++++ D+ T  S+L A A L ++ +GKQ+H++++R                   SG
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 407 FMS--------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            +               NV S +ALL+ Y K G ++ A + F  M  R++V+W A+I   
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            QNG     +  F  M+  G +P+S +L +VLS C+    ++ G Q  +    +  L   
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ-IHCRAIRSLLEQS 359

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
                +++ +  RSG F  A ++  Q+ +  + I W+S+I +   H   E A    +++ 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 573 KMEKLRDAAPYVAMSNIYAVAG 594
           +     D   YV + +  + AG
Sbjct: 420 RAGVEPDRITYVGVLSACSHAG 441



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 237/533 (44%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N ++S     G +  A  LF SM DR+ VSW  +I GY+Q     +A KLF
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSIL---------- 108
             M  +    PD  T  ++LS C+         QVHA I++    YNS +          
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238

Query: 109 ---------------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                I   +L++ Y KI  ++ AR +F  M  +D V++ A+I 
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G N+EAI LF  M   G +P+ +T AA LS    LA +  G+Q+H   +++   +
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +  V+NA++ +Y++      AR++F ++    + +++  MI   A + Q +E++ LF E+
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGR 325
                +  +  +  +LS  ++   +  G++ + Q      I+ E+     +VD+ A+ G 
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 478

Query: 326 FEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           F EA+E    +      + W +++SA                 CR             + 
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSA-----------------CR-------------VH 508

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
            +AELA L+  K L      SG      + SA+ ++Y+  G   DA + +K   E+ +  
Sbjct: 509 KNAELAELAAEKLLSIDPNNSG------AYSAIANVYSACGRWSDAARIWKARKEKAVRK 562

Query: 443 ---VSWNALISACAQNG---------DAQATL--KSFEDMVQSGYQPDSVSLL 481
               SW  + S     G         DA   +  + +E++  +G+ PD  S+L
Sbjct: 563 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 615


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/628 (41%), Positives = 389/628 (61%), Gaps = 40/628 (6%)

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           +EA++L     H   +PS   ++  ++A V    + LGR+VHA    +NFV  VF++N L
Sbjct: 72  KEAVELLHRTDH---RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128

Query: 216 LDLYSKHDCVV-------------------------------EARKLFGEMPEVDGVSYN 244
           LD+Y+K   +V                               +ARKLF EMP+ D  S+N
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN 188

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRS---QFPFSTLLSVVANKLDLQIGRQIHTQT 301
             I+ Y  + Q +E+L+LFR +Q  R +RS   +F  S+ L+  A    L++G++IH   
Sbjct: 189 AAISGYVTHNQPREALELFRVMQ--RHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I T    +  V ++L+D+Y KCG  +EA+ IF  +     V WT MI    + G  EE  
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF ++ ++ +  ++ TFA +L A A+ A+  LGK++H +++ +G+    F+ SAL+ MY
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMY 366

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +K G+ + A + F EM + ++VSW +LI   AQNG     L  FE ++QSG +PD V+ +
Sbjct: 367 SKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYV 426

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            VLSAC+H GL+++GL+YF+S+ +K+ L    +HYA ++D+L RSG F EAE ++  MP 
Sbjct: 427 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPV 486

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +PD+ +W+S++  CRIH NLE AK+AA  L+++E   + A Y+ ++NIYA AG W  V+ 
Sbjct: 487 KPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEP-ENPATYITLANIYANAGLWSEVAN 545

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+K M   G+ K    SW+E+K +VHVF   D  HP+T++I   +  L +++K+EGY PD
Sbjct: 546 VRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPD 605

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           T+  LHD +EE K ++L YHSE+LA+ F +I+TP G+PI V KNLR C DCH AIK ISK
Sbjct: 606 TNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISK 665

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I  R+ITVRDS+RFH F+DG CSC+D+W
Sbjct: 666 IVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 207/449 (46%), Gaps = 46/449 (10%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           Q+ + +EA +L    RTD    P    ++TL++ C          +VHA      +   +
Sbjct: 67  QQKRVKEAVELL--HRTD--HRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGV 122

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            I N L+D Y K   L  A+ +F EM  +D  S+N +I G+AK G  E+A KLF EM   
Sbjct: 123 FISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMP-- 180

Query: 169 GFKPSDFTFAAALSAGV------------------------------------GLADIAL 192
             +  +F++ AA+S  V                                     +  + L
Sbjct: 181 --QRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+++H ++++T    +  V +ALLDLY K   + EAR +F +M + D VS+  MI     
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE 298

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           + + +E   LFR+L  +    +++ F+ +L+  A+     +G+++H   +          
Sbjct: 299 DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFA 358

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++LV MY+KCG    A+ +F  +     V WT++I  Y Q G  +EAL+ F  + ++  
Sbjct: 359 ISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGT 418

Query: 373 SADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
             DQ T+  +L A      +  G +  HS   + G M      + ++D+ A+SG  K+A 
Sbjct: 419 KPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAE 478

Query: 432 QTFKEMPER-NIVSWNALISACAQNGDAQ 459
                MP + +   W +L+  C  +G+ +
Sbjct: 479 NIIDNMPVKPDKFLWASLLGGCRIHGNLE 507



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 211/462 (45%), Gaps = 19/462 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++  S N +I GY K G L  AR+LF+ M  R   SW   I GY   NQ REA +LF
Sbjct: 148 MGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELF 207

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+    S  +  T ++ L+  +         ++H  +I+   N   ++ ++L+D Y K
Sbjct: 208 RVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGK 267

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD AR +F +M  +D VS+  +I    ++G  EE   LF ++   G +P+++TFA  
Sbjct: 268 CGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGV 327

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A    A   LG++VH +++   +    F  +AL+ +YSK      AR++F EM + D 
Sbjct: 328 LNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDL 387

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHT 299
           VS+  +I  YA N Q  E+L  F  L  +     Q  +  +LS   +   +  G +  H+
Sbjct: 388 VSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHS 447

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                  +        ++D+ A+ GRF+EA+ I  N+        W +++      GNLE
Sbjct: 448 IKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLE 507

Query: 359 ------------EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
                       E  N    +  ANI A+   ++ +     ++ ++ + K+     I   
Sbjct: 508 LAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIK 567

Query: 407 FMSNVF-----SGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
              +VF     S     D++   G L   I+    +P+ N V
Sbjct: 568 RQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFV 609



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 45/335 (13%)

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           ++ KE+++L   L  T    S   +STL++       L++GR++H  T  +  +  V ++
Sbjct: 69  KRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFIS 125

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANI 372
           N L+DMYAKCG   +A+ +F  + H     W  MI  Y + G LE+A  LF EM  R N 
Sbjct: 126 NRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNF 185

Query: 373 SADQATFASIL----RASAEL---------------------------ASLSLGKQLHSF 401
           S + A    +     R + EL                             L LGK++H +
Sbjct: 186 SWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +IR+    +    SALLD+Y K GSL +A   F +M +R++VSW  +I  C ++G  +  
Sbjct: 246 LIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEG 305

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR----PKKEHYA 517
              F D++QSG +P+  +   VL+AC+     +   ++       Y +     P     +
Sbjct: 306 FLLFRDLMQSGVRPNEYTFAGVLNACA-----DHAAEHLGKEVHGYMMHAGYDPGSFAIS 360

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++V +  + G    A ++  +M  +PD + W+S+I
Sbjct: 361 ALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/639 (37%), Positives = 390/639 (61%), Gaps = 37/639 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+ +Y K   +   +  F  MP +DSVS+N  I GF+     +E+++LF  MQ  GF+
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+++T  + L+A   L+D+  G+Q+H  ++  NF+ NVF+ NAL D+Y+K   + +AR L
Sbjct: 153 PTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  + + + VS+N+MI+ YA N Q ++ + L  +++ +     Q   ST+++        
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------- 265

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                                       Y +CGR +EA+ +F+       V WTAM+  Y
Sbjct: 266 ----------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            + G  E+AL LF EM   +I  D  T +S++ + A+LASL  G+ +H   I +G  +N+
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SAL+DMY+K G + DA   F  MP RN+VSWNA+I  CAQNG  +  L+ FE+M+Q 
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
            ++PD+V+ + +LSAC HC  IE+G +YF+S+T ++ + P  +HYA MV++L R+G  ++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQ 477

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+  M  +PD ++WS++++ C    ++  A+ AA  LF+++    A PY+ +SN+YA
Sbjct: 478 AVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTI-AVPYIMLSNMYA 536

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+ V+ V+  M+ + V+K   +SW+E+ ++VH FT+ D  HP++ +I  K+  L+ 
Sbjct: 537 SMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIG 596

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACT 710
           ++++EG+ P+T+  LHD  E+ K +S+ +HSE+LA+AF LI  P G SPI ++KN+R C 
Sbjct: 597 KLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICN 656

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K  S+I GR+I +RDS+RFHHF  G CSC D W
Sbjct: 657 DCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 221/459 (48%), Gaps = 38/459 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N L+S Y KSG++   +  F+ M  R +VS+   I G+S  +  +E+ +LF
Sbjct: 84  MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +G    +Y T  ++L+  ++        Q+H  II   +   + I N+L D Y K
Sbjct: 144 KRMQREGFEPTEY-TIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR +F  + +K+ VS+N +I+G+AK G  E+ I L  +M+  G  P   T +  
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A                                   Y +   V EAR++F E  E D 
Sbjct: 263 IAA-----------------------------------YCQCGRVDEARRVFSEFKEKDI 287

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +  M+  YA N + +++L LF E+     +   +  S+++S  A    L  G+ +H +
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +I+    + + V+++L+DMY+KCG  ++A+ +F  +   + V W AMI    Q G+ ++A
Sbjct: 348 SILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLD 419
           L LF  M +     D  TF  IL A      +  G++   S   + G    +   + +++
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVN 467

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +  ++G ++ A+   K M  + + + W+ L+S C+  GD
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGD 506



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 42/400 (10%)

Query: 157 EAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           +A +L   M+H  F+P+D F     L        +   + +   ++K     ++F  NAL
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDIFSWNAL 95

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           L  Y+K   +   +  F  MP  D VSYN  I  ++ N   +ESL+LF+ +Q   F+ ++
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTE 155

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           +   ++L+  A   DL+ G+QIH   IV   +  V + N+L DMYAKCG  E+A+ +F  
Sbjct: 156 YTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           L+  + V W  MIS Y + G  E+ + L  +M  +    DQ T ++I+ A          
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA---------- 265

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
                                    Y + G + +A + F E  E++IV W A++   A+N
Sbjct: 266 -------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  F +M+    +PDS +L SV+S+C+    +  G Q  +  +    L      
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-QAVHGKSILAGLNNNLLV 359

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            ++++D+  + G  D+A  +   MP   + + W+++I  C
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGC 398



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 44/361 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L   Y K G +  AR LF+ +  +  VSW ++I GY++  Q  +   L   MR
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMR 248

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   PD VT +T+++                                   +YC+   +
Sbjct: 249 LSGHM-PDQVTMSTIIA-----------------------------------AYCQCGRV 272

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D ARRVF E  +KD V + A++ G+AK G  E+A+ LF EM     +P  +T ++ +S+ 
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+ VH   +      N+ V++AL+D+YSK   + +AR +F  MP  + VS+N
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ----IHTQ 300
            MI   A N   K++L+LF  +   +F      F  +LS   +   ++ G++    I  Q
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQ 452

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNLEE 359
             +T  +        +V++  + GR E+A  +  N++H    + W+ ++S    KG++  
Sbjct: 453 HGMTPTLDHYAC---MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVN 509

Query: 360 A 360
           A
Sbjct: 510 A 510


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/748 (37%), Positives = 438/748 (58%), Gaps = 7/748 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM- 63
           N    N LIS +   G++  A  +F+ M +   +SW  +I  Y +    +E+ + F  M 
Sbjct: 165 NVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMF 224

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI-R 122
           R     + +  T +T+L+GC   D       +H+ ++KFG+NS +   N+L+  Y    R
Sbjct: 225 RVH--KEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGR 282

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C D A  VF+ M +KD +S+N+++  +A++G   +A+KL   M ++    +  TF +AL+
Sbjct: 283 CED-AELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALA 341

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A         G+ +HA V+     ENV V NAL+ LY+K   ++EA+K+F  MP+ DGV+
Sbjct: 342 ACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVT 401

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQT 301
           +N +I  +A +E+  E+LK F+ ++      +    S +L       DL + G  IH   
Sbjct: 402 WNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFI 461

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I+T   S+  V NSL+ MYAKCG    +  IF  L+  +   W AM++A    G++EEAL
Sbjct: 462 ILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEAL 521

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
              +EM RA ++ D+ +F+  L A+A+LA L  G+QLH   ++ G  SN F  SA +DMY
Sbjct: 522 KFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMY 581

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + D ++       R+ +SWN L S+ +++G  +   ++F +M+  G +PD V+ +
Sbjct: 582 GKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFV 641

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           S+LSACSH G++EEGL Y++SM +++ +  K  H   ++D+L RSG F EAE  + +MP 
Sbjct: 642 SLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPV 701

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P + +W S++ +C+ H NLE  +KA + L K++   D+A YV  SNI A  G+WE V +
Sbjct: 702 SPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSA-YVLYSNICATTGKWEDVEK 760

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           +++ M    ++K  A SWV+LK+K+ +F   D  HPQ +EI  K+E L + +K+ GY PD
Sbjct: 761 IRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPD 820

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            S AL D DEE K  +L  HSERLA+A+ LI++PEGS + + KNLR C DCH+  K  S 
Sbjct: 821 ISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASG 880

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I GR+I +RD  RFH F  G CSC D+W
Sbjct: 881 ILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 239/456 (52%), Gaps = 3/456 (0%)

Query: 44  IGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKF 102
           + G+ +   +RE+ + F +MR D G  P  +  A+L++ C   +    E +QVH  I+K 
Sbjct: 1   MSGFVRAGSYRESMRFFNEMR-DFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G  S + +  SLV  Y        A +VF+EM  K+ VS+ AL+  +   G     + ++
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
             M+  G   +D T ++ +S  V L +  LG QV   V+K     NV VAN+L+ ++   
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             V EA  +F  M E D +S+N MI  Y  N   KESL+ F  +     + +    ST+L
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +   +  +L+ GR IH+  +     S V  +N+L+ MY+  GR E+A+ +F  +     +
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W +M++ Y Q GN  +AL L   M      A+  TF S L A ++    + GK LH+ V
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I  G   NV  G+AL+ +YAKSG + +A + F+ MP+R+ V+WNALI   A + +    L
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGL 497
           K+F+ M + G   + +++ +VL AC +   L+E G+
Sbjct: 420 KAFKLMREEGVPINYITISNVLGACLAPNDLLEHGM 455



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 243/483 (50%), Gaps = 6/483 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N  ++N LI+ Y  +G    A  +F  MV++  +SW  ++  Y+Q     +A KL   
Sbjct: 264 NSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLAT 323

Query: 63  M-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M     G+  +YVTF + L+ CS+P+ A E   +HA +I  G +  +I+ N+LV  Y K 
Sbjct: 324 MFYMRRGA--NYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKS 381

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  A++VF+ MP++D V++NALI G A     +EA+K F  M+  G   +  T +  L
Sbjct: 382 GLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVL 441

Query: 182 SAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
            A +   D +  G  +HAF++ T F  + +V N+L+ +Y+K   +  +  +F  +   + 
Sbjct: 442 GACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNA 501

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++N M+   A +   +E+LK   E++    +  +F FS  L+  A    L+ G+Q+H  
Sbjct: 502 SAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGL 561

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +     S   VA++ +DMY KCG  ++   I     + S + W  + S++ + G  E+A
Sbjct: 562 AVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKA 621

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
              F EM    +  D  TF S+L A +    +  G   +  +I+  G  + +     ++D
Sbjct: 622 KETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIID 681

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           +  +SG   +A    KEMP       W +L++AC  +G+ +   K+ E++++     DS 
Sbjct: 682 LLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSA 741

Query: 479 SLL 481
            +L
Sbjct: 742 YVL 744



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 285/579 (49%), Gaps = 10/579 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G  A A ++F  M+ +  VSWT L+  Y    +      ++  MR++G S  
Sbjct: 71  LVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCN 130

Query: 72  DYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T ++++S C   +  NEL+  QV   +IK+G  + + + NSL+  +     ++ A  
Sbjct: 131 DN-TMSSVISTCVSLE--NELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACY 187

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M + D++S+N++I  + + GL +E+++ F  M  +  K  + T  + + AG G  D
Sbjct: 188 VFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRV-HKEINSTTLSTMLAGCGSVD 246

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +H+ V+K  +  NV  +N L+ +YS      +A  +F  M E D +S+N M+ 
Sbjct: 247 NLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMA 306

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           CYA +    ++LKL   + + R   +   F++ L+  ++      G+ +H   I      
Sbjct: 307 CYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHE 366

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V V N+LV +YAK G   EAK++F  +     V W A+I  +      +EAL  F  M 
Sbjct: 367 NVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMR 426

Query: 369 RANISADQATFASILRAS-AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              +  +  T +++L A  A    L  G  +H+F+I +GF S+ +  ++L+ MYAK G L
Sbjct: 427 EEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDL 486

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             +   F  +  +N  +WNA+++A A +G  +  LK   +M ++G   D  S    L+A 
Sbjct: 487 NSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAA 546

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +   ++EEG Q  + +  K          ++ +D+  + G  D+  +++ + P     + 
Sbjct: 547 AKLAILEEG-QQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPR-PINRSRLS 604

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           W+ + +S   H   E AK+   ++  +    D   +V++
Sbjct: 605 WNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSL 643


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/746 (35%), Positives = 413/746 (55%), Gaps = 4/746 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVS-WTILIGGYSQKNQFREAFKLFVDM 63
           + V    L+  Y+K G+L  AR +F+ M   + V  WT L+ GY++    RE   LF  M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PD  T + +L   +   +  +   VH  + K G+ S   + N+L+  Y K   
Sbjct: 188 HC-CGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNR 246

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              A  VF  MP +D +S+N++I+G    GL ++AI+LFV M   G +    T  + L A
Sbjct: 247 TKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPA 306

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  + LGR VH + VKT F+    +AN LLD+YS         K+F  M + + VS+
Sbjct: 307 CAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSW 366

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MIT Y     Y +   LF+E+         F  ++ L   A    L+ G+ +H   I 
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIR 426

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 + V N+L++MY KCG  EEAK IF  +     + W  +I  Y +     EA +L
Sbjct: 427 NGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSL 486

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM    +  +  T   IL A+A L+SL  G+++H++ +R G++ + F  +AL+DMY K
Sbjct: 487 FTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G+L  A + F  +  +N++SW  +++    +G  +  +  FE M  SG  PD+ S  ++
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAI 605

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L ACSH GL +EG ++F++M +++K+ P+ +HY  MVD+L  +G   EA + +  MP EP
Sbjct: 606 LYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEP 665

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W S++  CRIH+N++ A++ A+++F++E   +   YV ++NIYA A +WE+V ++K
Sbjct: 666 DSSIWVSLLRGCRIHRNVKLAEEVAERVFELEP-ENTGYYVLLANIYAEAERWEAVRKLK 724

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             +  RG+R+ T  SW+E K KVHVF A++  HPQ   I   +  + + M++EG+ P   
Sbjct: 725 NKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKK 784

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            AL   D  +  E+L  HS +LA+AF ++N  EG  I V KN R C+ CH A K ISK+ 
Sbjct: 785 YALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMC 844

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI +RDS+RFHHF+ G CSCR +W
Sbjct: 845 SREIILRDSNRFHHFEQGRCSCRGYW 870


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/670 (38%), Positives = 395/670 (58%), Gaps = 18/670 (2%)

Query: 88  TANELIQVHADIIK-------FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
           T ++L Q+HA +++       F  + I+  C +L DS      L  AR VF ++P   + 
Sbjct: 52  TMSQLKQIHAQMLRTCLFVDPFSASKIVAFC-ALHDS----GSLPYARLVFNQIPNPTTF 106

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL-SAGVGLADIALGRQVHAF 199
           + N++I G+  + L  +AI  +  M   G  P  FTF +   S GV    +  G+Q+H  
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV----LCEGKQLHCH 162

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
             K  F  + ++ N L+++YS   C+V ARK+F +M     VS+  MI  YA  +   E+
Sbjct: 163 STKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEA 222

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           +KLFR ++      ++     +L+  A   DL+  +Q+H     T       + ++L+D+
Sbjct: 223 IKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDV 282

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KCG +  A+++F  +   +   W  MI+ +V+  + EEAL+LF EM  + +  D+ T 
Sbjct: 283 YCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 342

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           AS+L A   L +L LGK LH ++ +     +V  G+AL+DMYAK GS++ A++ F+EMPE
Sbjct: 343 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 402

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           +++++W ALI   A  G     L+ F +M  S  +PD+++ + VL+ACSH GL+ EG+ Y
Sbjct: 403 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 462

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           FNSM  KY ++P  EHY  MVD+L R+G   EAE L+  MP  PD  +   ++++CRIH 
Sbjct: 463 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 522

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           NL  A++AA QL +++  ++   YV +SNIY+    WE+  ++++ M ER ++K    S 
Sbjct: 523 NLVVAERAAQQLIELDP-KNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSA 581

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           +E+   VH F   D  HPQ++EI   ++++M+ +K  GY PD S  L D DE+ K   L 
Sbjct: 582 IEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELS 641

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
            HSE+LAIAF L++T  G+PI V+KNLR C+DCH+A+K IS++  REI VRD +RFHHF 
Sbjct: 642 LHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFT 701

Query: 740 DGFCSCRDFW 749
            G CSCRDFW
Sbjct: 702 KGSCSCRDFW 711



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 224/454 (49%), Gaps = 6/454 (1%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFAT 78
           SG+L  AR +FN + + T  +   +I GY+ KN  R+A  LF  +    G DPD  TF +
Sbjct: 87  SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPS 145

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           L   C       E  Q+H    K G+ S   I N+L++ Y    CL  AR+VF +M  K 
Sbjct: 146 LFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 202

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+  +I  +A+  L  EAIKLF  M+    KP++ T    L+A     D+   +QVH 
Sbjct: 203 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHK 262

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           ++ +T    +  + +AL+D+Y K  C   AR LF +MPE +   +N+MI  +  +  Y+E
Sbjct: 263 YIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEE 322

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L LF E+Q +     +   ++LL    +   L++G+ +H          +V +  +LVD
Sbjct: 323 ALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVD 382

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG  E A  +F  +     + WTA+I      G   +AL LF EM  + +  D  T
Sbjct: 383 MYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAIT 442

Query: 379 FASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F  +L A +    ++ G    +S   + G   ++     ++DM  ++G + +A    + M
Sbjct: 443 FVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502

Query: 438 P-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           P   +      L+SAC  +G+     ++ + +++
Sbjct: 503 PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE 536



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 6/363 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y   G L +AR++F+ MV+++ VSW  +IG Y+Q +   EA KLF  M      
Sbjct: 176 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEI-ASV 234

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ +T   +L+ C+         QVH  I + G     ++ ++L+D YCK  C  LAR 
Sbjct: 235 KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARD 294

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +MP+K+   +N +I G  ++   EEA+ LF EMQ  G K    T A+ L A   L  
Sbjct: 295 LFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGA 354

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+ +H ++ K     +V +  AL+D+Y+K   +  A ++F EMPE D +++  +I  
Sbjct: 355 LELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVG 414

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-S 308
            A   Q  ++L+LF E+Q +        F  +L+  ++   +  G            I  
Sbjct: 415 LAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQP 474

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNL---EEALNLF 364
            ++    +VDM  + GR  EA+++  N+           ++SA    GNL   E A    
Sbjct: 475 SIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQL 534

Query: 365 IEM 367
           IE+
Sbjct: 535 IEL 537



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 4/234 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV T+ L+  Y K G    AR+LFN M ++    W I+I G+ + + + EA  LF +M+
Sbjct: 272 HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ 331

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G    D VT A+LL  C+          +H  I K      + +  +LVD Y K   +
Sbjct: 332 LSGVKG-DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 390

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA- 183
           + A RVF+EMP+KD +++ ALI G A  G   +A++LF EMQ    KP   TF   L+A 
Sbjct: 391 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450

Query: 184 -GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
              GL +  +    ++   K     ++     ++D+  +   + EA  L   MP
Sbjct: 451 SHAGLVNEGIA-YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/721 (36%), Positives = 415/721 (57%), Gaps = 45/721 (6%)

Query: 69  SDPDYVTFA-----TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           SDP Y         TLLS C    +   L Q+H+ IIK G ++     + L++ +C I  
Sbjct: 23  SDPPYKLLQNHPSLTLLSTCK---SFQNLKQIHSQIIKTGLHNTQFALSKLIE-FCAISP 78

Query: 124 ---LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A  +F+ + Q +   +N +I G +       AI  +V M   G +P+ +TF   
Sbjct: 79  FGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFL 138

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD----------------- 223
           L +   +     G+Q+H  V+K     + FV  +L+++Y+++                  
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198

Query: 224 --------------CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
                         C+ +AR+LF E+P  D VS+N MI  YA + +++E+L  F+E++  
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               ++    T+LS  A    L++G  + +        S +++ N+L+DMY+KCG  ++A
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +++F  +     + W  MI  Y    + +EAL LF +M ++N+  +  TF SIL A A L
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378

Query: 390 ASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
            +L LGK +H+++ +    ++N    ++L+DMYAK G+++ A Q F  M  +++ SWNA+
Sbjct: 379 GALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAM 438

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           IS  A +G A   L+ F  M   G++PD ++ + VLSACSH GL+E G Q F+SM + Y 
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYD 498

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + PK +HY  M+D+L R+G FDEAE LM  M  +PD  +W S++ +CR+H N+E  + AA
Sbjct: 499 ISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAA 558

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
             LF++E   +   YV +SNIYA AG+W+ V++++  + ++G++KV   S +E+ S VH 
Sbjct: 559 KHLFELEP-ENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHE 617

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D++H Q+ +I + ++ + Q ++K G+ PDTS  L+D DEE K  SL +HSE+LAIA
Sbjct: 618 FLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIA 677

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F LI+T   + I ++KNLR C +CH+AIKLISKI  REI  RD +RFHHFKDG CSC D+
Sbjct: 678 FGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDY 737

Query: 749 W 749
           W
Sbjct: 738 W 738



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 219/476 (46%), Gaps = 39/476 (8%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           GNL+ A  LF S+       W  +I G S  +    A   +V M    G +P+  TF  L
Sbjct: 80  GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLL-CGVEPNSYTFPFL 138

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  C++     E  Q+H  ++K G  S   +  SL++ Y +   L  A  VF +   +D+
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198

Query: 140 VSFNALIT-------------------------------GFAKEGLNEEAIKLFVEMQHL 168
           VSF ALIT                               G+A+ G  EEA+  F EM+  
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
              P++ T    LSA      + LG  V +++       N+ + NAL+D+YSK   + +A
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R LF  + E D +S+NVMI  Y+    YKE+L LFR++Q +  + +   F ++L   A  
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378

Query: 289 LDLQIGRQIHTQTIVT-TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             L +G+ IH         ++   +  SL+DMYAKCG  E AK++FA +   S   W AM
Sbjct: 379 GALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAM 438

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           IS     G+   AL LF +M       D  TF  +L A +    + LG+Q  S ++    
Sbjct: 439 ISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYD 498

Query: 408 MSNVFSG-SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQ 459
           +S        ++D+  ++G   +A    K M   P+  I  W +L+ AC  +G+ +
Sbjct: 499 ISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAI--WGSLLGACRVHGNVE 552



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS   LI+GY   G L  AR LF  +  R AVSW  +I GY+Q  +F EA   F +M
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +      P+  T  T+LS C++  +      V + I   G  S L + N+L+D Y K   
Sbjct: 256 KR-ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD 314

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD AR +F+ + +KD +S+N +I G++     +EA+ LF +MQ    +P+D TF + L A
Sbjct: 315 LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPA 374

Query: 184 GVGLADIALGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
              L  + LG+ +HA++ K    + N  +  +L+D+Y+K   +  A+++F  M      S
Sbjct: 375 CAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+  A +     +L+LFR+++   F+     F  +LS  ++   +++GRQ  +  +
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
               IS +++    ++D+  + G F+EA+ +  N+        W +++ A    GN+E
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/739 (35%), Positives = 419/739 (56%), Gaps = 6/739 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  ++ +V+ GNL  A  +F  M +R   SW +L+GGY+++  F EA  L+  M   GG 
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192

Query: 70  DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            PD  TF  +L  C   PD A    +VH  ++++GY   + + N+L+  Y K   +  AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGR-EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  MP++D +S+NA+I+G+ + G+  E +KLF  M+ L   P   T  + +SA   L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D  LGR +HA+V+ T F  ++ V N+L  +Y       EA KLF  M   D VS+  MI+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMIS 371

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y +N   ++++  +R +        +   + +LS  A   DL  G ++H   I    IS
Sbjct: 372 GYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V VAN+L++MY+KC   ++A +IF N+   + + WT++I+         EAL  F +M 
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM- 490

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  +  +  T  + L A A + +L  GK++H+ V+R+G   + F  +ALLDMY + G + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F    ++++ SWN L++  ++ G     ++ F+ MV++  +PD ++ +S+L  C 
Sbjct: 551 IAWNQFNSQ-KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCG 609

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              ++ +GL YF+ M ++Y + P  +HYA +VD+L R+G   EA K + +MP  PD  +W
Sbjct: 610 KSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++N+CRIH N++  + +A ++F+++K      Y+ + N+YA  G+W  V++V++ M+E
Sbjct: 669 GALLNACRIHHNIDLGELSAQRIFELDK-GSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            G+      SWVE+K KVH F ++D+ HPQT EI   ++   ++M + G    +  +  D
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMD 787

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           E E  + E    HSER AIAF LIN+  G PI V KNL  C  CH  +K ISK   REI+
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREIS 847

Query: 729 VRDSSRFHHFKDGFCSCRD 747
           VRDS  FHHFKDG CSC D
Sbjct: 848 VRDSEHFHHFKDGECSCGD 866



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 216/434 (49%), Gaps = 7/434 (1%)

Query: 46  GYSQKNQFREAFKLFVDMR-TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY 104
           G     +  EA KL   M+      D D   F  L+  C       E  +V++  +    
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDED--VFVALVRLCEWKRAHEEGSKVYSVALS-SM 124

Query: 105 NSILI-ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV 163
           NS+ + + N+ +  + +   L  A  VF +M +++  S+N L+ G+AK+G  +EAI L+ 
Sbjct: 125 NSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYH 184

Query: 164 EMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            M  +G  KP  +TF   L    G+ D+A GR+VH  VV+  +  ++ V NAL+ +Y K 
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             V  AR LF  MP  D +S+N MI+ Y  N    E LKLF  ++    D      ++++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S      D ++GR IH   I T    ++ V NSL  MY   G + EA+++F+ +     V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT MIS Y      E+A++ +  M + ++  D+ T A++L A A L  L  G +LH   
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I++  +S V   + L++MY+K   +  A+  F  +P +N++SW ++I+    N      L
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484

Query: 463 KSFEDMVQSGYQPD 476
             F  M  +  QP+
Sbjct: 485 IFFRQMKMT-LQPN 497


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/688 (37%), Positives = 405/688 (58%), Gaps = 41/688 (5%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA ++KF  +S+  + + L+  Y  I  L  + R+F  +    ++++ ++I  +   G
Sbjct: 27  QLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHG 85

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  +++  F+ M   G  P    F + L +   L D+ LG  +H ++++     +++  N
Sbjct: 86  LPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGN 145

Query: 214 ALLDLYSKHDCVVEA--------------------------------RKLFGEMPEVDGV 241
           AL+++YSK   + E+                                RK+F  MPE D V
Sbjct: 146 ALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLV 205

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +I   A N  Y+E+L++ RE+         F  S++L ++A  +D+  G++IH  +
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCS 265

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I     +++ VA+SL+DMYAKC R  ++  +F  L+    + W ++I+  VQ G  +E L
Sbjct: 266 IRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 325

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             F +M  A I     +F+SI+ A A L +L LGKQLH ++ R+GF  N+F  S+L+DMY
Sbjct: 326 RFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 385

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G+++ A Q F  M  R++VSW A+I  CA +G A   ++ FE M   G +       
Sbjct: 386 AKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK------- 438

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           +VL+ACSH GL++E  +YFNSMT+ + + P  EHYA++ D+L R+G  +EA   +  M  
Sbjct: 439 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 498

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P   +W++++++CR+HKN++ A+K A+++ +++   +   Y+ ++NIY+ A +W+  ++
Sbjct: 499 GPTGSIWATLLSACRVHKNIDMAEKVANRILEVDP-NNTGAYILLANIYSAARRWKEAAK 557

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + +MR  G+RK  A SW+E+K+KV+ F A DE HP   +IR  +E L++ M+KEGY PD
Sbjct: 558 WRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPD 617

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           TS   HD +EE K   +  HSERLAI F +INTP G  I V KNLR CTDCH A K ISK
Sbjct: 618 TSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISK 677

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I GREI VRD+SRFHHFK+G CSC D+W
Sbjct: 678 IVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 216/461 (46%), Gaps = 46/461 (9%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           LFN++    A++W  +I  Y+      ++   F+ M   G   PD+  F ++L  C+   
Sbjct: 62  LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG-LYPDHNVFPSVLKSCALLM 120

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL----------------------- 124
             N    +H  II+ G +  L   N+L++ Y K+R L                       
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180

Query: 125 ---------DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
                    D  R++F+ MP+KD VS+N +I G A+ GL EE +++  EM     KP  F
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T ++ L       DI+ G+++H   ++     +++VA++L+D+Y+K   V ++ ++F  +
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL 300

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
            E DG+S+N +I     N  + E L+ FR++   +     + FS+++   A+   L +G+
Sbjct: 301 TERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 360

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H           + +A+SLVDMYAKCG    AK+IF  +     V WTAMI      G
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSG 414
              +A+ LF +M    I A       +L A +    +    K  +S     G    V   
Sbjct: 421 QAPDAIELFEQMETEGIKA-------VLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 473

Query: 415 SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISAC 452
           +A+ D+  ++G L++A      M   P  +I  W  L+SAC
Sbjct: 474 AAVSDLLGRAGRLEEAYDFICGMHIGPTGSI--WATLLSAC 512



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 177/341 (51%), Gaps = 14/341 (4%)

Query: 24  TARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTFATLLS 81
           + R++F  M ++  VSW  +I G ++   + E  ++  +M   GG++  PD  T +++L 
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLP 247

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             +E    +   ++H   I+ G ++ + + +SL+D Y K   +  + RVF  + ++D +S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N++I G  + GL +E ++ F +M     KP  ++F++ + A   L  + LG+Q+H ++ 
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           +  F EN+F+A++L+D+Y+K   +  A+++F  M   D VS+  MI   A + Q  ++++
Sbjct: 368 RNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE 427

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           LF +++      ++   + L +     L  +  +  ++ T        V+   ++ D+  
Sbjct: 428 LFEQME------TEGIKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLG 481

Query: 322 KCGRFEEAKEIFANLSHISTVP--WTAMISAYVQKGNLEEA 360
           + GR EEA +    + HI      W  ++SA     N++ A
Sbjct: 482 RAGRLEEAYDFICGM-HIGPTGSIWATLLSACRVHKNIDMA 521



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 32/280 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +A +  +F  + +R  +SW  +I G  Q   F E  + F  M       P
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM-AKIKP 338

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              +F++++  C+   T +   Q+H  I + G++  + I +SLVD Y K   +  A+++F
Sbjct: 339 KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIF 398

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP------------------- 172
             M  +D VS+ A+I G A  G   +AI+LF +M+  G K                    
Sbjct: 399 DRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKAVLTACSHGGLVDEAWKYFN 458

Query: 173 ---SDFTFAAALSAGVGLADIALGR-----QVHAFVVKTNFVENVFVANALLDLYSKHDC 224
               DF  A  +     ++D+ LGR     + + F+   +      +   LL     H  
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDL-LGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKN 517

Query: 225 VVEARKLFGEMPEVD---GVSYNVMITCYAWNEQYKESLK 261
           +  A K+   + EVD     +Y ++   Y+   ++KE+ K
Sbjct: 518 IDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAK 557



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    + L+  Y K GN+ TA+++F+ M  R  VSWT +I G +   Q  +A +LF  
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M T+G           +L+ CS     +E
Sbjct: 432 METEG--------IKAVLTACSHGGLVDE 452



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAI 431
           ++ +A   ++LR    + S S  +QLH+ V++  F + ++ + S LL +Y+    L D++
Sbjct: 3   TSTEALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSL 60

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           + F  +     ++W ++I     +G    +L SF  M+ SG  PD     SVL +C+
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/670 (37%), Positives = 385/670 (57%), Gaps = 33/670 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+L+ +    R +    R+F  MP++D+VS+NALITGF+  G    +++L+   ++    
Sbjct: 83  NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P+  T +A +     L+D ALG  VH  V++  F    FV + L+D+Y+K   + +AR+
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202

Query: 231 LFGEMP-------------------------------EVDGVSYNVMITCYAWNEQYKES 259
           +F EM                                + D +++  M+T    N    E+
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L +FR ++       Q+ F ++L+       L+ G+QIH     T     V V ++LVDM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KC     A+ +F  ++  + + WTAMI  Y Q    EEA+  F EM    I  D  T 
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG M  +   +AL+ +Y K GS++DA + F EM  
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            + VSW AL++  AQ G A+ T+  FE M+ +G +PD V+ + VLSACS  GL+E+G  Y
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F+SM + + + P  +HY  M+D+  RSG F EAE+ + QMP  PD   W+++++SCR+  
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N+E  K AA+ L + +  ++ A YV + +++A  GQW  V+ +++ MR+R V+K    SW
Sbjct: 563 NMEIGKWAAENLLETDP-QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW 621

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ K+KVH+F+A+D+ HP ++ I  K+E L  +M +EGYKPD S  LHD  +  KV  + 
Sbjct: 622 IKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           +HSE+LAIAF LI  P+  PI ++KNLR C DCH A K ISKITGR+I VRD+ RFH F 
Sbjct: 682 HHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFS 741

Query: 740 DGFCSCRDFW 749
           DG CSC DFW
Sbjct: 742 DGTCSCGDFW 751



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 250/520 (48%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+ N  + N L+S    S  +     LF SM +R AVS+  LI G+S       + +L+
Sbjct: 74  MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +  +    P  +T + ++   S          VH  +++ G+ +   + + LVD Y K
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193

Query: 121 IRCLDLARRVFKEMPQK-------------------------------DSVSFNALITGF 149
           +  +  ARRVF+EM  K                               DS+++  ++TG 
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  EA+ +F  M+  G     +TF + L+A   LA +  G+Q+HA++ +T + +NV
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+YSK   +  A  +F  M   + +S+  MI  Y  N   +E+++ F E+Q  
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F   +++S  AN   L+ G Q H   +V+  +  + V+N+LV +Y KCG  E+A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +S    V WTA+++ Y Q G  +E ++LF +M    +  D  TF  +L A +  
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 390 ASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNA 447
             +  G     S     G +      + ++D+Y++SG  K+A +  K+MP   +   W  
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C   G+ +    + E+++++  Q P S  LL  + A
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHA 593



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 8/146 (5%)

Query: 379 FASILRASAE---LASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTF 434
           +A+IL ++A       + +   +H  ++++   +   F  + LL  YAKSG L  A + F
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EMP+ N+ + NAL+SA A +      +   E +  S  + D+VS  ++++  S  G   
Sbjct: 72  DEMPDPNLFTRNALLSALAHS----RLVPDMERLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMV 520
             +Q + ++ ++  +RP +   ++M+
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMI 153



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 29/214 (13%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+F+ +ALL   A S  + D  + F  MPER+ VS+NALI+  +  G    +++ +  ++
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 470 -QSGYQPDSVSL---LSVLSACS--------HCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +   +P  ++L   + V SA S        HC ++  G   +  +             +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVG------------S 185

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            +VD+  + G   +A ++  +M  +   +M++++I      K +E AK     LF++   
Sbjct: 186 PLVDMYAKMGLIRDARRVFQEMEAKT-VVMYNTLITGLLRCKMIEDAKG----LFQLMVD 240

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           RD+  +  M       G       V + MR  GV
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/738 (36%), Positives = 420/738 (56%), Gaps = 9/738 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y   G+L  A  +F+ +    A+ W IL+   ++   F  +  LF  M + G  + D  T
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYT 197

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F+ +    S   + N   Q+H  I+K G+     + NSLV  Y K   +D AR+VF EM 
Sbjct: 198 FSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD---IAL 192
           ++D +S+N++I G+   GL E+ + +FV+M    F   +   A  +S   G AD   I+L
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQML---FSGIEIDLATIVSVFAGCADSRLISL 314

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VH F VK  F       N LLD+YSK   +  A+ +F EM     VSY  MI  YA 
Sbjct: 315 GRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAR 374

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                E++KLF E++        +  + +L+  A    L  G+++H          ++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFV 434

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRAN 371
           +N+L+DMYAKCG   EA+ +F+ +     + W  +I  Y +     EAL+LF + +    
Sbjct: 435 SNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR 494

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
            S D+ T A +L A A L++   G+++H +++R+G+ S+    ++L+DMYAK G+L  A 
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 554

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F ++  +++VSW  +I+    +G  +  +  F  M Q+G +PD +S +S+L ACSH G
Sbjct: 555 LLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSG 614

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG ++FN M  + K+ P  EHYA +VD+L R+G   +A + +  MP  PD  +W ++
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGAL 674

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +  CRIH +++ A++ A+++F++E   +   YV M+NIYA A +WE V +++K + +RG+
Sbjct: 675 LCGCRIHHDVKLAERVAEKVFELEP-ENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGL 733

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    SW+E+K +V++F A D  +P+T +I   +  +   M +EGY P T  AL D +E
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEE 793

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K E+L  HSE+LA+A  +I++  G  I V KNLR C DCH   K +SK+T REI +RD
Sbjct: 794 MEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRD 853

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFH FKDG CSCR FW
Sbjct: 854 SNRFHQFKDGHCSCRGFW 871



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 242/459 (52%), Gaps = 5/459 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+V  N L++ Y+K+  + +AR++F+ M +R  +SW  +I GY       +   +FV M
Sbjct: 229 RNSVG-NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G + D  T  ++ +GC++    +    VH   +K  ++     CN+L+D Y K   
Sbjct: 288 LFS-GIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGD 346

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A+ VF+EM  +  VS+ ++I G+A+EGL  EA+KLF EM+  G  P  +T  A L+ 
Sbjct: 347 LDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G++VH ++ + +   ++FV+NAL+D+Y+K   + EA  +F EM   D +S+
Sbjct: 407 CARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISW 466

Query: 244 NVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N +I  Y+ N    E+L LF  L    RF   +   + +L   A+      GR+IH   +
Sbjct: 467 NTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S+  VANSLVDMYAKCG    A+ +F +++    V WT MI+ Y   G  +EA+ 
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIA 586

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF +M +A I  D+ +F S+L A +    +  G +  + +         V   + ++DM 
Sbjct: 587 LFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           A++G+L  A +  + MP   +   W AL+  C  + D +
Sbjct: 647 ARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 685



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 266/543 (48%), Gaps = 25/543 (4%)

Query: 34  DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELI 93
           DR+       +  + +    + A KL   +   G  D D  T  ++L  C++  +  +  
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAVKL---LHVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +V   I   G+     + + L   Y     L  A RVF ++  + ++ +N L+   AK G
Sbjct: 115 EVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSG 174

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               +I LF +M   G +   +TF+    +   L  +  G Q+H +++K+ F E   V N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGN 234

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+  Y K+  V  ARK+F EM E D +S+N +I  Y  N   ++ L +F ++ F+    
Sbjct: 235 SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI-- 292

Query: 274 SQFPFSTLLSVVANKLD---LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            +   +T++SV A   D   + +GR +H   +      E +  N+L+DMY+KCG  + AK
Sbjct: 293 -EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +S  S V +T+MI+ Y ++G   EA+ LF EM    IS D  T  ++L   A   
Sbjct: 352 VVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNR 411

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L  GK++H ++  +    ++F  +AL+DMYAK GS+++A   F EM  ++I+SWN +I 
Sbjct: 412 LLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIG 471

Query: 451 ACAQNGDAQATLKSFE-DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
             ++N  A   L  F   +V+  + PD  ++  VL AC+     ++G +    + +    
Sbjct: 472 GYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531

Query: 510 RPKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFE----PDEIMWSSVINSCRIHKNLEFA 564
             +  H A S+VD+  + G       L+A++ F+     D + W+ +I    +H    F 
Sbjct: 532 SDR--HVANSLVDMYAKCGAL-----LLARLLFDDITSKDLVSWTVMIAGYGMHG---FG 581

Query: 565 KKA 567
           K+A
Sbjct: 582 KEA 584


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/702 (36%), Positives = 397/702 (56%), Gaps = 50/702 (7%)

Query: 95   VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
            +HA +IK G   + I  N L++ Y K + L+ A ++F+E+PQ D  S+  LI+GFA+ GL
Sbjct: 310  LHAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 155  NEEAIKLFVEMQHLGFKPSDFTFAAAL-SAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
            + + + LF +MQ  G  P+ FT +  L S    + D  +G+ +H ++++     +  + N
Sbjct: 368  SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 214  ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF----- 268
            ++LD Y K  C   A KLFG M E D VS+N+M++ Y      ++S+ LFR+L       
Sbjct: 428  SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAAS 487

Query: 269  --TRFDR------------------------SQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              T  D                         ++  FS  L + ++   L +G+QIHTQ +
Sbjct: 488  WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547

Query: 303  VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH---------------ISTVPWTAM 347
                + +  V NSL+DMY KCG  E+A  IF +L                 + +V W++M
Sbjct: 548  KVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSM 607

Query: 348  ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
            +S YVQ G  E+AL  F  M  + +  D+ T  S++ A A    L LG+Q+H ++ + G 
Sbjct: 608  VSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH 667

Query: 408  MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
              +VF GS+++DMY K GSL DA   F +  +RN+V W ++IS CA +G  +  ++ FE 
Sbjct: 668  GLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFEL 727

Query: 468  MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
            M+  G  P+ VS + VL+ACSH GL+EEG +YF  M + Y +RP  EH+  MVD+  R+G
Sbjct: 728  MINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAG 787

Query: 528  CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
              +E ++ +          +W S ++SCR+HKN+E       +L ++E   DA PY+  S
Sbjct: 788  RLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPF-DAGPYILFS 846

Query: 588  NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
            +I A   +WE  ++++  M++RGV+K  + SW++LK++VH F   D  HPQ  +I   ++
Sbjct: 847  SICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLD 906

Query: 648  NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
             L+  +K+ GY  D +  + D ++E +   L YHSE+LAIA+ +I+T  G+PI VMKNLR
Sbjct: 907  ELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLR 966

Query: 708  ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             C DCH  IK  S++ GREI +RD  RFHHFK G CSC D+W
Sbjct: 967  VCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 239/503 (47%), Gaps = 66/503 (13%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +  N L++ Y KS NL  A ++F  +      SWT+LI G+++     +   LF  M+ D
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQ-D 380

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G  P+  T + +L  CS     + + + +H  I++ G +   ++ NS++D Y K RC  
Sbjct: 381 QGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFG 440

Query: 126 LARR-------------------------------VFKEMPQKDSVSFNALITGFAKEGL 154
            A +                               +F+++P KD+ S+N +I G  + G 
Sbjct: 441 YAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGC 500

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
              A++L  +M   G   +  TF+ AL     L+ + LG+Q+H  V+K   +++ FV N+
Sbjct: 501 ERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNS 560

Query: 215 LLDLYSKHDCVVEARKLFGEMPE---------------VDGVSYNVMITCYAWNEQYKES 259
           L+D+Y K   + +A  +F  +P+               V+ VS++ M++ Y  N +++++
Sbjct: 561 LIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDA 620

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           LK F  +  ++ +  +F  ++++S  A+   L++GRQ+H          +V + +S++DM
Sbjct: 621 LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDM 680

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KCG   +A  IF      + V WT+MIS     G   EA+ LF  M    I+ ++ +F
Sbjct: 681 YVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSF 740

Query: 380 ASILRASAELASLSLGKQLHSFV-----IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             +L A +    L  G +    +     IR G  +  F  + ++D+Y ++G L +     
Sbjct: 741 VGVLTACSHAGLLEEGCKYFRLMREVYGIRPG--AEHF--TCMVDLYGRAGRLNE----I 792

Query: 435 KEMPERNIVS-----WNALISAC 452
           KE    N +S     W + +S+C
Sbjct: 793 KEFIHNNAISKLSSVWRSFLSSC 815



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 184/379 (48%), Gaps = 20/379 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++TVS N+++S Y++ G++  + +LF  +  + A SW  +I G  +    R A +L 
Sbjct: 449 MAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELL 508

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    G   + +TF+  L   S         Q+H  ++K G      + NSL+D YCK
Sbjct: 509 YKM-VAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCK 567

Query: 121 IRCLDLARRVFKEMPQK---------------DSVSFNALITGFAKEGLNEEAIKLFVEM 165
              ++ A  +FK +PQ+               +SVS++++++G+ + G  E+A+K F  M
Sbjct: 568 CGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFM 627

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
                +   FT  + +SA      + LGRQVH ++ K     +VF+ ++++D+Y K   +
Sbjct: 628 ICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSL 687

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
            +A  +F +  + + V +  MI+  A + Q +E+++LF  +       ++  F  +L+  
Sbjct: 688 NDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 747

Query: 286 ANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTV 342
           ++   L+ G +       V       +    +VD+Y + GR  E KE   N  +S +S+V
Sbjct: 748 SHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV 807

Query: 343 PWTAMISAYVQKGNLEEAL 361
            W + +S+     N+E  +
Sbjct: 808 -WRSFLSSCRVHKNIEMGI 825


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/578 (41%), Positives = 369/578 (63%), Gaps = 3/578 (0%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV-ANALLDLYSKHD 223
           +Q     P    ++  L     L  +  GR VHA +V ++F++N  V  N ++++Y+K  
Sbjct: 78  IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
           C+ +AR++F EMP  D V++  +I  ++ N + +++L LF ++    F  + F  S+LL 
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
              ++  L  G Q+H   +     S V V ++LVDMYA+CG  + A+  F  +   S V 
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W A+IS + +KG  E AL+L  +M R N      T++S+L A A + +L  GK +H+ +I
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           +SG     F G+ LLDMYAK+GS+ DA + F  + + ++VSWN +++ CAQ+G  + TL 
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            FE M++ G +P+ +S L VL+ACSH GL++EGL YF  M +KYK+ P   HY + VD+L
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLL 436

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            R G  D AE+ + +MP EP   +W +++ +CR+HKN+E    AA++ F+++   D+ P 
Sbjct: 437 GRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP-HDSGPR 495

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
           + +SNIYA AG+W  V++V+K M+E GV+K  A SWVE+++ VH+F ANDE HP+  EIR
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
            K E +  ++K+ GY PDTS  L   D++ + E L+YHSE+LA+AFAL+NTP GSPI + 
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           KN+R C DCHAAIK +SK+  REI VRD++RFH F+DG
Sbjct: 616 KNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 205/394 (52%), Gaps = 2/394 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYC 119
           +D+   G   PDY  ++ LL  C+      +   VHA ++   + ++ L++ N +V+ Y 
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K  CLD ARR+F EMP KD V++ ALI GF++     +A+ LF +M  LGF+P+ FT ++
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A      +  G Q+HAF +K  +  +V+V +AL+D+Y++   +  A+  F  MP   
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I+ +A   + + +L L  ++Q   F  + F +S++LS  A+   L+ G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHA 314

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I +       + N+L+DMYAK G  ++AK +F  L     V W  M++   Q G  +E
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE 374

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            L+ F +M R  I  ++ +F  +L A +    L  G      + +     +V      +D
Sbjct: 375 TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  + G L  A +  +EMP E     W AL+ AC
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N++++ Y K G L  AR +F+ M  +  V+WT LI G+SQ N+ R+A  LF  
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P++ T ++LL         +   Q+HA  +K+GY S + + ++LVD Y +  
Sbjct: 180 M-LRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCG 238

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D A+  F  MP K  VS+NALI+G A++G  E A+ L  +MQ   F+P+ FT+++ LS
Sbjct: 239 HMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLS 298

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +  +  G+ VHA ++K+      F+ N LLD+Y+K   + +A+++F  + + D VS
Sbjct: 299 ACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVS 358

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+T  A +   KE+L  F ++     + ++  F  +L+  ++   L  G        
Sbjct: 359 WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK 418

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
                 +V    + VD+  + G  + A+     +    T   W A++ A     N+E
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/742 (35%), Positives = 417/742 (56%), Gaps = 7/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ GNL  A  +F  M +R   SW +L+GGY++   F EA  L+  M      
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF ++L  C+         ++HA +I+FG+ S + + N+L+  Y K   +  AR 
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +MP++D +S+NA+I+G+ + G   E ++LF  M+ L   P   T     SA   L +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LGR VH +VVK+ F  ++ + N+L+ +YS    + EA  +F  M   D VS+  MI  
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              ++   ++++ ++ ++       +    ++LS  A    L +G ++H   I T  +S 
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V+NSL+DMY+KC   + A E+F N+S  + V WT++I          EAL LF    +
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMK 493

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            ++  +  T  S+L A A + +L  GK++H+  +R+G   + F  +A+LDMY + G    
Sbjct: 494 ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A+  F    ++++ +WN L++  AQ G A+  ++ F+ M++    PD ++ +S+L ACS 
Sbjct: 554 ALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ EGL+YFN M  KY L P  +HYA +VDIL R+G  D+A   +  MP  PD  +W 
Sbjct: 613 SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N+CRIH+N+E  + AA ++F+ +  +    Y+ + N+YA  G W+ VS+V+  MRER
Sbjct: 673 ALLNACRIHRNVELGEIAAKRVFEKDN-KSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+      SWVE+K KVH F + D  H Q+ EI   ++    +MK+ G+  +   +   E
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFG-NLKSSFTSE 790

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E  + +    HSER AIAF LINT  G PI V KNL  C  CH  +K IS I  REI+V
Sbjct: 791 IESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 730 RDSSRFHHFKDGFCSCRD--FW 749
           RD   +HHFKDG CSC D  +W
Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 190/366 (51%), Gaps = 2/366 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G +V+  V  +     V + NALL ++ +   +++A  +FG+M E D  S+NV++  YA 
Sbjct: 116 GSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAK 175

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + E+L L+  + +     + + F ++L   A   D+  G++IH   I     S+V V
Sbjct: 176 AGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDV 235

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+ MY KCG    A+ +F  +     + W AMIS Y + G   E L LF  M   ++
Sbjct: 236 GNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSV 295

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T  ++  A   L +  LG+ +H +V++S F  ++   ++L+ MY+  G L++A  
Sbjct: 296 DPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  M  +++VSW A+I++   +      +++++ M   G  PD ++L+SVLSAC+  G 
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++ G++  + +  K  L        S++D+  +  C D A ++   +  + + + W+S+I
Sbjct: 416 LDLGIR-LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLI 473

Query: 553 NSCRIH 558
              RI+
Sbjct: 474 LGLRIN 479



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + + +N LI  Y K   +  A E+F ++  +  VSWT LI G    N+  EA   F  M+
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 P+ VT  ++LS C+         ++HA  ++ G      + N+++D Y  +RC 
Sbjct: 494 ES--MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMY--VRC- 548

Query: 125 DLARRVFK----EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              R+V         +KD  ++N L+TG+A++G  + A++LF +M  L   P + TF + 
Sbjct: 549 --GRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 181 LSA 183
           L A
Sbjct: 607 LCA 609


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/695 (37%), Positives = 400/695 (57%), Gaps = 2/695 (0%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
           +F    ++   G    D  T A L+   +     N+  Q+HA +I+ G      + N  +
Sbjct: 58  SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
           + Y K   LD   ++F +M Q++ VS+ ++ITGFA     +EA+  F +M+  G   + F
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
             ++ L A   L  I  G QVH  VVK  F   +FV + L D+YSK   + +A K F EM
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           P  D V +  MI  +  N  +K++L  + ++        Q    + LS  +       G+
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGK 297

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQK 354
            +H   +      E  + N+L DMY+K G    A  +F   S  IS V  TA+I  YV+ 
Sbjct: 298 SLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEM 357

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
             +E+AL+ F+++ R  I  ++ TF S+++A A  A L  G QLH  V++  F  + F  
Sbjct: 358 DQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           S L+DMY K G    +IQ F E+   + ++WN L+   +Q+G  +  +++F  M+  G +
Sbjct: 418 STLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLK 477

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P++V+ +++L  CSH G++E+GL YF+SM + Y + PK+EHY+ ++D+L R+G   EAE 
Sbjct: 478 PNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAED 537

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            +  MPFEP+   W S + +C+IH ++E AK AAD+L K+E   ++  +V +SNIYA   
Sbjct: 538 FINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEP-ENSGAHVLLSNIYAKEK 596

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           QWE V  ++K +++  + K+  YSWV++++K HVF   D  HPQ  EI  K++NL+ ++K
Sbjct: 597 QWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIK 656

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + GY P T   L D D+ +K + L YHSER+A+AF+L+  P G PI+V KNLR C+DCH+
Sbjct: 657 RIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHS 716

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A+K ISK+T R I VRD SRFHHF +G CSC D+W
Sbjct: 717 ALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 228/458 (49%), Gaps = 4/458 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT  +N  ++ Y K G L    +LF+ M  R  VSWT +I G++  ++F+EA   F  MR
Sbjct: 109 NTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMR 168

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G     +   +++L  C+         QVH  ++K G+   L + ++L D Y K   L
Sbjct: 169 IEGEIATQF-ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGEL 227

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A + F+EMP KD+V + ++I GF K G  ++A+  +++M             + LSA 
Sbjct: 228 SDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSAC 287

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVSY 243
             L   + G+ +HA ++K  F    F+ NAL D+YSK   +V A  +F    + +  VS 
Sbjct: 288 SALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSL 347

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +I  Y   +Q +++L  F +L+    + ++F F++L+   AN+  L+ G Q+H Q + 
Sbjct: 348 TAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK 407

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  V+++LVDMY KCG F+ + ++F  + +   + W  ++  + Q G    A+  
Sbjct: 408 FNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIET 467

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYA 422
           F  M    +  +  TF ++L+  +    +  G    S + +  G +      S ++D+  
Sbjct: 468 FNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLG 527

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++G LK+A      MP E N+  W + + AC  +GD +
Sbjct: 528 RAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDME 565


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 268/750 (35%), Positives = 426/750 (56%), Gaps = 13/750 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF----K 58
           +QN V +  LI+ YV  G+++ +R  F+ +  +   SW  +I  Y +  ++ EA     +
Sbjct: 51  SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           LF  M   G   PD+ TF  +L  C          +VH  + K G+   + +  SLV  Y
Sbjct: 111 LF-SMCGGGHLRPDFYTFPPILKACVSLVDGK---KVHCCVFKMGFEDDVFVAASLVHLY 166

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            +   LD+A +VF +MP KD  S+NA+I+GF + G    A+ +   M+  G K    T A
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L       D+  G  +H  V+K     +VFV+NAL+++YSK   + +A+ +F +M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VS+N +I  Y  N     +L+ F+ +Q            +L S+ +   D +I R I 
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSIL 346

Query: 299 TQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
              I    +  +V + N+LV+MYAK G    A  +F  L    T+ W  +++ Y Q G  
Sbjct: 347 GFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLA 406

Query: 358 EEALNLF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            EA++ +  +E CR  I  +Q T+ SI+ A + + +L  G ++H+ +I++    +VF  +
Sbjct: 407 SEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVAT 465

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            L+D+Y K G L+DA+  F E+P    V WNA+I++   +G  +  L+ F+DM+    + 
Sbjct: 466 CLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA 525

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D ++ +S+LSACSH GL++EG + F+ M ++Y ++P  +HY  MVD+L R+G  ++A +L
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MP +PD  +W +++++C+I+ N E    A+D+L +++   +   YV +SNIYA   +
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS-ENVGYYVLLSNIYANTEK 644

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           WE V +V+   R+RG+RK   +S V + SK  VF   ++ HP+  EI ++++ L  +MK 
Sbjct: 645 WEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKS 704

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY PD S    D +E+ K + L  HSERLAIAF +I+TP  SPI + KNLR C DCH A
Sbjct: 705 LGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNA 764

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSC 745
            K IS+I+ REI VRDS+RFHHFKDG CSC
Sbjct: 765 TKYISRISEREIVVRDSNRFHHFKDGICSC 794



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 189/393 (48%), Gaps = 11/393 (2%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +++HA ++     +N+ ++  L++LY  H  +  +R  F  + + +  S+N +I+ Y   
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 254 EQYKESL----KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            +Y E++    +LF            + F  +L    + +D   G+++H          +
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V VA SLV +Y++ G  + A ++F ++       W AMIS + Q GN   AL +   M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D  T ASIL   A+   +  G  +H  V++ G  S+VF  +AL++MY+K G L+D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F +M  R++VSWN++I+A  QN D    L+ F+ M   G +PD ++++S+ S  S 
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ 335

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
                        + ++  L        ++V++  + G  + A  +  Q+P   D I W+
Sbjct: 336 LSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWN 394

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +++     +     A +A D    ME+ RD  P
Sbjct: 395 TLVTG---YTQNGLASEAIDAYNMMEECRDTIP 424



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 31/183 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++T+S N L++GY ++G  + A + +N M                   + R+     
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMM------------------EECRDTI--- 423

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     P+  T+ +++   S      + +++HA +IK      + +   L+D Y K
Sbjct: 424 ----------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK 473

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A  +F E+P+  SV +NA+I      G  EEA++LF +M     K    TF + 
Sbjct: 474 CGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSL 533

Query: 181 LSA 183
           LSA
Sbjct: 534 LSA 536


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/704 (37%), Positives = 401/704 (56%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++  Y K   L+ A +VF  +P +DSVS+  +I G+ + G  E+AIK+FV+M      
Sbjct: 45  NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ FT    L++        +G++VH+FVVK      V VAN+LL++Y+K   +  A+ +
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 232 FGEMPEVDGVSYNVMITCY----------------------AWNEQY---------KESL 260
           F  M   +  S+N MI+ +                      +WN             E+L
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224

Query: 261 KLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           + F   L+ T     +F  ++ LS  AN   L  G+QIH   + T   +   V N+L+ M
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                  A++IF +L     V WTA
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  YVQ G   +A+ +F  M       +  T A++L AS+ + SL+ GKQ+H+  IRSG
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSF 465
              +   G+AL  MYAK+GS+  A + F  + + R+ VSW ++I A AQ+G  +  ++ F
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELF 464

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M+  G +PD ++ + VLSAC+H GL+E+G  YF+ M   +K+ P   HYA MVD+  R
Sbjct: 465 EQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGR 524

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA K +  MP EPD I W S+++SC+++KN++ AK AA++L  +E   ++  Y A
Sbjct: 525 AGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEP-NNSGAYSA 583

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  G+W+  ++++K M+ RGV+K    SWV++++K HVF   D LHPQ +EI + 
Sbjct: 584 LANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKM 643

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           ++ + +E+KK G+ PDT   LHD + E+K + L+YHSE+LAIAF +I+TPE + + +MKN
Sbjct: 644 MDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKN 703

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH AIK ISK+  REI VRD++RFHHFKDG CSC+D+W
Sbjct: 704 LRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 167/630 (26%), Positives = 287/630 (45%), Gaps = 92/630 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP + T S N ++SGY K G L  A ++F+ +  R +VSWT +I GY+Q  +F +A K+F
Sbjct: 36  MPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIF 95

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           VDM  D    P   T   +L+ C+   +     +VH+ ++K G ++ + + NSL++ Y K
Sbjct: 96  VDMVKD-KVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAK 154

Query: 121 IRCLDLARRVFKEM-------------------------------PQKDSVSFNALITGF 149
              L +A+ VF  M                                ++D VS+N++I G 
Sbjct: 155 TGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGC 214

Query: 150 AKEGLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + G + EA++ F   ++    KP  F+ A+ALSA   L  ++ G+Q+H ++V+T F  +
Sbjct: 215 NQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDAS 274

Query: 209 VFVANALLDLYSKHDCV---------------------------------VEARKLFGEM 235
             V NAL+ +Y+K   V                                   AR++F  +
Sbjct: 275 GAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSL 334

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
            + D V++  MI  Y  N    +++++F+ +       + F  + +LS  ++   L  G+
Sbjct: 335 KDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGK 394

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQK 354
           QIH   I +       V N+L  MYAK G    A+++F  L  +  TV WT+MI A  Q 
Sbjct: 395 QIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQH 454

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  EEA+ LF +M    I  D  T+  +L A      +  G+     +     +    S 
Sbjct: 455 GLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSH 514

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            A ++D++ ++G L++A +  + MP E ++++W +L+S+C    +      + E ++   
Sbjct: 515 YACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLL-- 572

Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF-- 529
            +P++    S L+   S CG  ++  +    M  +     KKE   S V I  ++  F  
Sbjct: 573 IEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKAR---GVKKEQGLSWVQIQNKTHVFGV 629

Query: 530 --------DEAEKLM-------AQMPFEPD 544
                   DE  K+M        +M F PD
Sbjct: 630 EDGLHPQKDEIYKMMDKIWKEIKKMGFAPD 659



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 35/240 (14%)

Query: 310 VKVANSLVDMYAKC-------------------------------GRFEEAKEIFANLSH 338
           V + N+L+++YAK                                G+ E+A ++F  +  
Sbjct: 10  VYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPV 69

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
             +V WT +I  Y Q G  E+A+ +F++M +  +   Q T  ++L + A   S  +GK++
Sbjct: 70  RDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKV 129

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           HSFV++ G  + V   ++LL+MYAK+G LK A   F  M  RN  SWNA+IS     G  
Sbjct: 130 HSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRV 189

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              L  FE + +     D VS  S+++ C+  G   E LQ+F+S+ +   L+P +   AS
Sbjct: 190 DLALAQFELLSER----DIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +++ G   +V+  + L+++YAK+G   DA   F EMP +   SWN ++S  A+ G  +  
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
            + F D++      DSVS  +++   +  G  E+ ++ F  M  K K+ P +    +++ 
Sbjct: 61  HQVF-DLIPV---RDSVSWTTIIVGYNQMGRFEDAIKIFVDMV-KDKVLPTQFTLTNVLA 115

Query: 522 ILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
               +G     +K+   + ++       + +S++N      +L+ AK   D++    KLR
Sbjct: 116 SCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM----KLR 171

Query: 579 DAAPYVAMSNIYAVAGQ 595
           + + + AM +++   G+
Sbjct: 172 NTSSWNAMISLHMNCGR 188


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/775 (35%), Positives = 423/775 (54%), Gaps = 80/775 (10%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+   +  N  I+ ++++G +  A  LF +M  R+  ++  ++ GY+   +  +A   F 
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            +       PD  ++ TLL               HA          L + +SL D     
Sbjct: 163 SI-----PRPDSFSYNTLL---------------HA----------LGVSSSLAD----- 187

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                 R +F EMP KDSVS+N +I+  A  GL   A   F     L  +    ++   L
Sbjct: 188 -----VRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF----DLAPEKDAVSWNGML 238

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           +A V    I   R++  F  +T +  +    NAL+  Y +   + EA+K+F +MP+ D V
Sbjct: 239 AAYVRNGRIQEAREL--FDSRTEW--DAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVV 294

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N M++ YA      E+ +LF         R  F ++ ++S  A    L+  +++    
Sbjct: 295 SWNTMVSGYARRGDMAEARRLFDVAPI----RDVFTWTAIVSGYAQNGMLEEAKRVFDAM 350

Query: 302 IVTTAIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFA 334
               A+S                            V   N+++  YA+ G  +EA+ IF 
Sbjct: 351 PDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFG 410

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +     V W AM++AY Q G  EE L LF EM R     +++ FA +L   A++A+L  
Sbjct: 411 MMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALEC 470

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G QLHS +I++G+    F G+ALL MY K GS+++A   F+EM ER++VSWN +I+  A+
Sbjct: 471 GMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYAR 530

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G  +  L+ F+ M ++  +PD ++L+ VL+ACSH GL+E+G+ YF SM + + +  K E
Sbjct: 531 HGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPE 590

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  M+D+L R+G  DEA  LM  MPFEPD  MW +++ + RIH+N E  + AA+++F++
Sbjct: 591 HYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFEL 650

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           E   +A  YV +SNIYA +G+W  V +++  M ERGV+KV  +SW+E+++KVH F+  D 
Sbjct: 651 EP-ENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDS 709

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
           +HP+  +I   +E+L   MKK GY   T   LHD +EE K   LKYHSE+LA+A+ ++  
Sbjct: 710 VHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKI 769

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P G PI V+KNLR C DCH A K IS I GR I +RDS+RFHHF+DG CSC D+W
Sbjct: 770 PPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 240/487 (49%), Gaps = 21/487 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +++VS N++IS +   G ++ AR  F+   ++ AVSW  ++  Y +  + +EA +LF
Sbjct: 195 MPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF 254

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            D RT+     D +++  L++G  +     E  ++   + +      ++  N++V  Y +
Sbjct: 255 -DSRTEW----DAISWNALMAGYVQRSQIEEAQKMFNKMPQ----RDVVSWNTMVSGYAR 305

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  ARR+F   P +D  ++ A+++G+A+ G+ EEA ++F  M       +  ++ A 
Sbjct: 306 RGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP----DKNAVSWNAM 361

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A V    +   ++    +       NV   N +L  Y++   + EAR +FG MP+ D 
Sbjct: 362 MAAYVQRRMMEEAKE----LFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDA 417

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  M+  Y+     +E+L+LF+E+       ++  F+ +LS  A+   L+ G Q+H++
Sbjct: 418 VSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSR 477

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I         V N+L+ MY KCG  EEA   F  +     V W  MI+ Y + G  +EA
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLD 419
           L +F  M + +   D  T   +L A +    +  G    +S     G  +     + ++D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           +  ++G L +A+   K+MP E +   W AL+ A   + +++    + E + +   +P++ 
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFE--LEPENA 655

Query: 479 SLLSVLS 485
            +  +LS
Sbjct: 656 GMYVLLS 662


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/639 (37%), Positives = 389/639 (60%), Gaps = 37/639 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+ +Y K   +   +  F  MP +DSVS+N  I GF+     +E+++LF  MQ  GF+
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+++T  + L+A   L D+  G+Q+H  ++  NF+ NVF+ NAL D+Y+K   + +AR L
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  + + + VS+N+MI+ YA N Q ++ + L  +++ +     Q   ST+++        
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------- 265

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                                       Y +CGR +EA+ +F+       V WTAM+  Y
Sbjct: 266 ----------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            + G  E+AL LF EM   +I  D  T +S++ + A+LASL  G+ +H   I +G  +N+
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SAL+DMY+K G + DA   F  MP RN+VSWNA+I  CAQNG  +  L+ FE+M+Q 
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
            ++PD+V+ + +LSAC HC  IE+G +YF+S++ ++ + P  +HYA MV++L R+G  ++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQ 477

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+  M  +PD ++WS++++ C    ++  A+ AA  LF+++    A PY+ +SN+YA
Sbjct: 478 AVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTI-AVPYIMLSNMYA 536

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+ V+ V+  M+ + V+K   +SW+E+ ++VH FT+ D  HP++ +I  K+  L+ 
Sbjct: 537 SMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIG 596

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACT 710
           ++++EG+ P+T+  LHD  E+ K +S+ +HSE+LA+AF LI  P G SPI ++KN+R C 
Sbjct: 597 KLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICN 656

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K  S+I GR+I +RDS+RFHHF  G CSC D W
Sbjct: 657 DCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 221/459 (48%), Gaps = 38/459 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N L+S Y KSG++   +  F+ M  R +VS+   I G+S  +  +E+ +LF
Sbjct: 84  MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +G    +Y T  ++L+  ++        Q+H  II   +   + I N+L D Y K
Sbjct: 144 KRMQREGFEPTEY-TIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR +F  + +K+ VS+N +I+G+AK G  E+ I L  +M+  G  P   T +  
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A                                   Y +   V EAR++F E  E D 
Sbjct: 263 IAA-----------------------------------YCQCGRVDEARRVFSEFKEKDI 287

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +  M+  YA N + +++L LF E+     +   +  S+++S  A    L  G+ +H +
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +I+    + + V+++L+DMY+KCG  ++A+ +F  +   + V W AMI    Q G+ ++A
Sbjct: 348 SILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLD 419
           L LF  M +     D  TF  IL A      +  G++   S   + G    +   + +++
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVN 467

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +  ++G ++ A+   K M  + + + W+ L+S C+  GD
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGD 506



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 188/400 (47%), Gaps = 42/400 (10%)

Query: 157 EAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           +A +L   M+H  F+P+D F     L        +   + +   ++K     + F  NAL
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK----RDXFSWNAL 95

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           L  Y+K   +   +  F  MP  D VSYN  I  ++ N   +ESL+LF+ +Q   F+ ++
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTE 155

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           +   ++L+  A  LDL+ G+QIH   IV   +  V + N+L DMYAKCG  E+A+ +F  
Sbjct: 156 YTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDC 215

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           L+  + V W  MIS Y + G  E+ + L  +M  +    DQ T ++I+ A          
Sbjct: 216 LTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA---------- 265

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
                                    Y + G + +A + F E  E++IV W A++   A+N
Sbjct: 266 -------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  F +M+    +PDS +L SV+S+C+    +  G Q  +  +    L      
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHG-QAVHGKSILAGLNNNLLV 359

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            ++++D+  + G  D+A  +   MP   + + W+++I  C
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGC 398



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 44/361 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L   Y K G +  AR LF+ +  +  VSW ++I GY++  Q  +   L   MR
Sbjct: 189 NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMR 248

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   PD VT +T+++                                   +YC+   +
Sbjct: 249 LSGHM-PDQVTMSTIIA-----------------------------------AYCQCGRV 272

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D ARRVF E  +KD V + A++ G+AK G  E+A+ LF EM     +P  +T ++ +S+ 
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+ VH   +      N+ V++AL+D+YSK   + +AR +F  MP  + VS+N
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ----IHTQ 300
            MI   A N   K++L+LF  +   +F      F  +LS   +   ++ G++    I  Q
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQ 452

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNLEE 359
             +T  +        +V++  + GR E+A  +  N++H    + W+ ++S    KG++  
Sbjct: 453 HGMTPTLDHYAC---MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVN 509

Query: 360 A 360
           A
Sbjct: 510 A 510


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/742 (35%), Positives = 417/742 (56%), Gaps = 7/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ GNL  A  +F  M +R   SW +L+GGY++   F EA  L+  M      
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF ++L  C+         ++HA +I+FG+ S + + N+L+  Y K   +  AR 
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +MP++D +S+NA+I+G+ + G   E ++LF  M+ L   P   T     SA   L +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LGR VH +VVK+ F  ++ + N+L+ +YS    + EA  +F  M   D VS+  MI  
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              ++   ++++ ++ ++       +    ++LS  A    L +G ++H   I T  +S 
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V+NSL+DMY+KC   + A E+F N+S  + V WT++I          EAL LF    +
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMK 493

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            ++  +  T  S+L A A + +L  GK++H+  +R+G   + F  +A+LDMY + G    
Sbjct: 494 ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A+  F    ++++ +WN L++  AQ G A+  ++ F+ M++    PD ++ +S+L ACS 
Sbjct: 554 ALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ EGL+YFN M  KY L P  +HYA +VDIL R+G  D+A   +  MP  PD  +W 
Sbjct: 613 SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N+CRIH+N+E  + AA ++F+ +  +    Y+ + N+YA  G W+ VS+V+  MRER
Sbjct: 673 ALLNACRIHRNVELGEIAAKRVFEKDN-KSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+      SWVE+K KVH F + D  H Q+ EI   ++    +MK+ G+  +   +   E
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFG-NLKSSFTSE 790

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E  + +    HSER AIAF LINT  G PI V KNL  C  CH  +K IS I  REI+V
Sbjct: 791 IESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISV 850

Query: 730 RDSSRFHHFKDGFCSCRD--FW 749
           RD   +HHFKDG CSC D  +W
Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 190/366 (51%), Gaps = 2/366 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G +V+  V  +     V + NALL ++ +   +++A  +FG+M E D  S+NV++  YA 
Sbjct: 116 GSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAK 175

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + E+L L+  + +     + + F ++L   A   D+  G++IH   I     S+V V
Sbjct: 176 AGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDV 235

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+ MY KCG    A+ +F  +     + W AMIS Y + G   E L LF  M   ++
Sbjct: 236 GNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSV 295

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T  ++  A   L +  LG+ +H +V++S F  ++   ++L+ MY+  G L++A  
Sbjct: 296 DPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  M  +++VSW A+I++   +      +++++ M   G  PD ++L+SVLSAC+  G 
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++ G++  + +  K  L        S++D+  +  C D A ++   +  + + + W+S+I
Sbjct: 416 LDLGIR-LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLI 473

Query: 553 NSCRIH 558
              RI+
Sbjct: 474 LGLRIN 479



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 11/183 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + + +N LI  Y K   +  A E+F ++  +  VSWT LI G    N+  EA   F  M+
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 P+ VT  ++LS C+         ++HA  ++ G      + N+++D Y  +RC 
Sbjct: 494 ES--MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMY--VRC- 548

Query: 125 DLARRVFK----EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              R+V         +KD  ++N L+TG+A++G  + A++LF +M  L   P + TF + 
Sbjct: 549 --GRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 181 LSA 183
           L A
Sbjct: 607 LCA 609


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/741 (36%), Positives = 414/741 (55%), Gaps = 6/741 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
            N LIS +    ++  A  +FN+M +R  +SW  +I   +   +F E+   F  MR     
Sbjct: 390  NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTH-P 448

Query: 70   DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              DY+T + LL  C           +H  I K G  S + +CNSL+  Y +    + A  
Sbjct: 449  KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508

Query: 130  VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            VF  MP +D +S+N+++    ++G    AI L VEM       +  TF  ALSA   L  
Sbjct: 509  VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEK 568

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            + +   VHAFV+      N+ + N L+ +Y K   + EA+K+   MPE D V++N +I  
Sbjct: 569  LKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625

Query: 250  YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL-SVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A ++    +++ F  ++      +      LL + ++    L+ G  IH   +V     
Sbjct: 626  HADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFEL 685

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            +  V +SL+ MYA+CG    +  IF  L++ ++  W A+ SA    G  EEAL     M 
Sbjct: 686  DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745

Query: 369  RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
               +  DQ +F+  L     L  L  G+QLHS++I+ GF  + +  +A +DMY K G + 
Sbjct: 746  NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805

Query: 429  DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            D  +       R+  SWN LISA A++G  +   ++F +M+  G +PD V+ +S+LSACS
Sbjct: 806  DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS 865

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H GL++EGL YF+SMT ++ +    EH   ++D+L RSG   EAE  + +MP  P+E +W
Sbjct: 866  HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
             S++ +C++H NLE  +KAAD+LF++    D+A YV  SN+ A   +W  V  V+K M  
Sbjct: 926  RSLLAACKVHGNLELGRKAADRLFELNSSDDSA-YVLYSNVCASTQRWGDVENVRKQMES 984

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            + ++K  A SW++LK+KV  F   D+ HPQ+ +I  K+E L +  ++EG+ PDTS AL D
Sbjct: 985  QSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQD 1044

Query: 669  EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
             DEE K  +L  HSER+A+AF LIN+ EGSP+ + KNLR C DCH+  KL+SKI GR+I 
Sbjct: 1045 TDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIV 1104

Query: 729  VRDSSRFHHFKDGFCSCRDFW 749
            VRDS RFHHF  G CSC D+W
Sbjct: 1105 VRDSYRFHHFHGGKCSCSDYW 1125



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 254/486 (52%), Gaps = 6/486 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QNT  TN L++ Y K G++  A+ +F+ M DR   SW  +I G+ +   + +A + F  M
Sbjct: 180 QNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHM 239

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKIR 122
             +G +   YV  A++++ C       E   Q+H  ++K G  S + +  SL+  Y    
Sbjct: 240 FENGVTPSSYV-IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A ++F+E+ + + VS+ +L+  +A  G  +E + ++  ++H G   +  T A  + 
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358

Query: 183 AGVGLADIALGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
                 D  +G Q+   V+K+     +V VAN+L+ ++  +D V EA ++F  M E D +
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI 418

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +IT  A N +++ESL  F  ++ T         S LL    +   L+ GR +H   
Sbjct: 419 SWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLI 478

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
             +   S V V NSL+ MYA+ G  E+A+ +F  +     + W +M++++V+ G    A+
Sbjct: 479 TKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAI 538

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            L +EM +   + +  TF + L A   L  L   K +H+FVI      N+  G+ L+ MY
Sbjct: 539 LLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMY 595

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + +A +  K MPER++V+WNALI   A + D  AT+++F  M + G   + ++++
Sbjct: 596 GKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIV 655

Query: 482 SVLSAC 487
           ++L  C
Sbjct: 656 NLLGTC 661



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 243/488 (49%), Gaps = 9/488 (1%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S+P    F  L  G SE    N    +HA  +K          N+LV+ Y K   +  A+
Sbjct: 145 SNPQVSRF--LQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQ 202

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF +M  ++  S+N +I+GF + G   +A++ F  M   G  PS +  A+ ++A     
Sbjct: 203 HVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSG 262

Query: 189 DIALG-RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +  G RQ+H +VVK   + NVFV  +LL  Y  H  V EA KLF E+ E + VS+  ++
Sbjct: 263 CMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLM 322

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA- 306
            CYA N   KE L ++R L+      +    +T++       D  +G QI    I +   
Sbjct: 323 VCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLD 382

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S V VANSL+ M+      EEA  +F N+    T+ W ++I+A    G  EE+L  F  
Sbjct: 383 TSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFW 442

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R +   D  T +++L A      L  G+ LH  + +SG  SNV   ++LL MYA++GS
Sbjct: 443 MRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGS 502

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
            +DA   F  MP R+++SWN+++++  ++G     +    +M+++    + V+  + LSA
Sbjct: 503 SEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSA 562

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C +     E L+  ++    + +        ++V +  + G  DEA+K+   MP E D +
Sbjct: 563 CYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVV 617

Query: 547 MWSSVINS 554
            W+++I  
Sbjct: 618 TWNALIGG 625



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 177/367 (48%), Gaps = 20/367 (5%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N +  N L++ Y K G +  A+++   M +R  V+W  LIGG++         + F  
Sbjct: 582 HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNL 641

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           MR + G   +Y+T   LL  C  PD      + +HA I+  G+     + +SL+  Y + 
Sbjct: 642 MRRE-GLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQC 700

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ +  +F  +  K+S ++NA+ +  A  G  EEA+K    M++ G     F+F+ AL
Sbjct: 701 GDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVAL 760

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           +    L  +  G+Q+H++++K  F  + +V NA +D+Y K   + +  ++   +P++   
Sbjct: 761 ATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRIL-PIPKIRSK 819

Query: 242 -SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQ 296
            S+N++I+  A +  ++++ + F E+           F +LLS  ++   +  G      
Sbjct: 820 RSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSS 879

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-----WTAMISAY 351
           + ++  V TAI        ++D+  + GR  EA+     +     VP     W ++++A 
Sbjct: 880 MTSEFGVPTAIEHCVC---IIDLLGRSGRLAEAEGFIDKMP----VPPNEFVWRSLLAAC 932

Query: 352 VQKGNLE 358
              GNLE
Sbjct: 933 KVHGNLE 939


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/746 (36%), Positives = 420/746 (56%), Gaps = 7/746 (0%)

Query: 6   TVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           TVS  N LIS +    ++  A  +F+ M +R  +SW  +I          ++ + F  MR
Sbjct: 194 TVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMR 253

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
               +  DY+T + LL  C           +H  ++K G  S + +CNSL+  Y +    
Sbjct: 254 YTH-AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKS 312

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A  VF +M ++D +S+N+++      G    A++L +EM       +  TF  ALSA 
Sbjct: 313 EDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSAC 372

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  + +   VHAFV+      N+ + NAL+ +Y K   +  A+++   MP+ D V++N
Sbjct: 373 YNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWN 429

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIHTQTIV 303
            +I  +A N++   +++ F  L+      +      LLS   +  DL   G  IH   +V
Sbjct: 430 ALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVV 489

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                E  V +SL+ MYA+CG    +  IF  L++ ++  W A++SA    G  EEAL L
Sbjct: 490 AGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKL 549

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            I+M    I  DQ +F+        L  L  G+QLHS +I+ GF SN +  +A +DMY K
Sbjct: 550 IIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGK 609

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G + D  +   +   R+  SWN LISA A++G  Q   ++F +M+  G +PD V+ +S+
Sbjct: 610 CGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSL 669

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACSH GL++EGL YF+SM+ K+ +    EH   ++D+L R+G   EAE  + +MP  P
Sbjct: 670 LSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPP 729

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
            +++W S++ +C+IH NLE A+KAAD+LF+++   D+A YV  SN+ A   +W  V  V+
Sbjct: 730 TDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSA-YVLYSNVCASTRRWRDVENVR 788

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M    ++K  A SWV+LK++V  F   D+ HPQ  EI  K+E L + +++ GY PDTS
Sbjct: 789 KQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTS 848

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            +L D DEE K  +L  HSER+A+AF LIN+ EGSP+ + KNLR C DCH+  K++S+I 
Sbjct: 849 YSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQII 908

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GR+I +RD+ RFHHF  G CSC D+W
Sbjct: 909 GRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 249/472 (52%), Gaps = 5/472 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G++  A+ +F+ M +R   SW  L+ G+ +   +++A + F  M   G     YV 
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 76  FATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            A+L++ C       E   QVHA +IK G    + +  SL+  Y     +     VFKE+
Sbjct: 62  -ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
            + + VS+ +L+ G+A  G  +E + ++  ++  G   ++   A  + +   L D  LG 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           QV   V+K+     V VAN+L+ ++   D + EA  +F +M E D +S+N +IT    N 
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             ++SL+ F ++++T         S LL V  +  +L+ GR +H   + +   S V V N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY++ G+ E+A+ +F  +     + W +M++++V  GN   AL L IEM +   + 
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  TF + L A   L +L   K +H+FVI  G   N+  G+AL+ MY K GS+  A +  
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           K MP+R+ V+WNALI   A N +  A +++F  + + G   + ++++++LSA
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 229/438 (52%), Gaps = 6/438 (1%)

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   ++ A+ VF +MP+++  S+N L++GF + G  ++A++ F  M   G +PS +  
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 178 AAALSAGVGLADIALGR-QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A+ ++A      +  G  QVHA V+K     +VFV  +LL  Y     V E   +F E+ 
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E + VS+  ++  YA+N   KE + ++R L+      ++   +T++      +D  +G Q
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +    I +   + V VANSL+ M+  C   EEA  +F ++    T+ W ++I+A V  G+
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            E++L  F +M   +   D  T +++L       +L  G+ LH  V++SG  SNV   ++
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNS 301

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           LL MY+++G  +DA   F +M ER+++SWN+++++   NG+    L+   +M+Q+    +
Sbjct: 302 LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATN 361

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            V+  + LSAC +     E L+  ++      L        ++V +  + G    A+++ 
Sbjct: 362 YVTFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 537 AQMPFEPDEIMWSSVINS 554
             MP + DE+ W+++I  
Sbjct: 418 KIMP-DRDEVTWNALIGG 434



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 267/578 (46%), Gaps = 11/578 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G +A    +F  + +   VSWT L+ GY+     +E   ++  +R DG    
Sbjct: 100 LLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCN 159

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +    AT++  C          QV   +IK G ++ + + NSL+  +     ++ A  VF
Sbjct: 160 EN-AMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVF 218

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +M ++D++S+N++IT     G  E++++ F +M++   K    T +A L       ++ 
Sbjct: 219 DDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLR 278

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR +H  VVK+    NV V N+LL +YS+     +A  +F +M E D +S+N M+  + 
Sbjct: 279 WGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHV 338

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N  Y  +L+L  E+  TR   +   F+T LS   N   L+I   +H   I+      + 
Sbjct: 339 DNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLI 395

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+LV MY K G    A+ +   +     V W A+I  +        A+  F  +    
Sbjct: 396 IGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG 455

Query: 372 ISADQATFASILRASAELAS---LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  +  T  ++L  SA L+    L  G  +H+ ++ +GF    F  S+L+ MYA+ G L 
Sbjct: 456 VPVNYITIVNLL--SAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLN 513

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            +   F  +  +N  +WNA++SA A  G  +  LK    M   G   D  S     +   
Sbjct: 514 TSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIG 573

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           +  L++EG Q  +S+  K+          + +D+  + G  D+  +++ Q P    +  W
Sbjct: 574 NLTLLDEG-QQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRSRSQRSW 631

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           + +I++   H   + A++A  ++  +    D   +V++
Sbjct: 632 NILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSL 669



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 180/364 (49%), Gaps = 10/364 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N +  N L++ Y K G++A A+ +   M DR  V+W  LIGG++   +   A + F  
Sbjct: 391 HHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNL 450

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDT-ANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +R + G   +Y+T   LLS    PD   +  + +HA I+  G+     + +SL+  Y + 
Sbjct: 451 LREE-GVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQC 509

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ +  +F  +  K+S ++NA+++  A  G  EEA+KL ++M++ G     F+F+ A 
Sbjct: 510 GDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAH 569

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           +    L  +  G+Q+H+ ++K  F  N +V NA +D+Y K   + +  ++  +       
Sbjct: 570 AIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQR 629

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQI 297
           S+N++I+  A +  ++++ + F E+           F +LLS  ++   +  G      +
Sbjct: 630 SWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSM 689

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGN 356
            T+  V T I        ++D+  + G+  EA+     +    T + W ++++A    GN
Sbjct: 690 STKFGVPTGIEHCVC---IIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGN 746

Query: 357 LEEA 360
           LE A
Sbjct: 747 LELA 750



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 181/371 (48%), Gaps = 6/371 (1%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   +  A+ +F +MPE +  S+N +++ +     Y+++++ F  +       S + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 278 FSTLLSVVANKLDLQIGR-QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++L++       +  G  Q+H   I      +V V  SL+  Y   G   E   +F  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
              + V WT+++  Y   G ++E ++++  + R  +  ++   A+++R+   L    LG 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+   VI+SG  + V   ++L+ M+    S+++A   F +M ER+ +SWN++I+A   NG
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
             + +L+ F  M  +  + D +++ ++L  C     +  G +  + M  K  L       
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG-RGLHGMVVKSGLESNVCVC 299

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            S++ +  ++G  ++AE +  +M  E D I W+S++ S   H +     +A + L +M +
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMR-ERDLISWNSMMAS---HVDNGNYPRALELLIEMLQ 355

Query: 577 LRDAAPYVAMS 587
            R A  YV  +
Sbjct: 356 TRKATNYVTFT 366


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/725 (36%), Positives = 406/725 (56%), Gaps = 4/725 (0%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR LF S+       + +L+ G+S  +    +  L+  +R +    PD  T+A  ++ CS
Sbjct: 63  ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                  L+ +HA  I  GY S + + ++LVD YCK   +  AR+VF  MP++D+V +N 
Sbjct: 123 ND---KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +I G  K    +++I+LF EM   G +    T  A L A   L ++ +G  +    +K  
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F    +V   L+ LYSK   V  AR LF  +   D ++YN MI+ +  N   + S+KLFR
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           EL F+    S      L+ + +    L +   IH   + +  I    V+ +   +Y K  
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             + A+ +F      + V W AMIS Y Q G+ E A++LF EM +   + +  T  +IL 
Sbjct: 360 EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A A+L SLS GK +H  +       N++  +AL+DMYAK G++ +A Q F  M E+N V+
Sbjct: 420 ACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT 479

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN +I     +G     LK + +M+  GY P +V+ LSVL ACSH GL+ EG + F++M 
Sbjct: 480 WNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMV 539

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            KY++ P  EHYA MVDIL RSG  ++A + + +MP EP   +W +++ +C IHK+ + A
Sbjct: 540 NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIA 599

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           + A+++LF+++       YV +SNIY+V   +   + +++ +++R + K    + +E+  
Sbjct: 600 RLASERLFELDP-GSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNG 658

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
             HVF + D  H    +I  K+E L  +M++ GY+ +T  ALHD +EE K  ++  HSE+
Sbjct: 659 TPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEK 718

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LAIAF LI T  G+ I ++KNLR C DCH A K ISKIT R I VRD++RFHHFKDG CS
Sbjct: 719 LAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICS 778

Query: 745 CRDFW 749
           C D+W
Sbjct: 779 CGDYW 783



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 239/500 (47%), Gaps = 10/500 (2%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           TL S  ++  T   L Q HA  I  GY   L     L            AR +F  +P+ 
Sbjct: 14  TLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKP 73

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           D   FN L+ GF+       +I L+  + ++    P +FT+A A++A      + L   +
Sbjct: 74  DIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---L 130

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           HA  +   +  NVFV +AL+DLY K   VV ARK+F  MPE D V +N MI     N  +
Sbjct: 131 HAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCF 190

Query: 257 KESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            +S++LFRE+     R D S    + +L   A   +L++G  I    +         V  
Sbjct: 191 DDSIQLFREMVADGVRVDSST--VTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT 248

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ +Y+KCG    A+ +F  ++    + + AMIS +   G  E ++ LF E+  +    
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             +T   ++   +    L L   +H F ++SG + N    +A   +Y K   +  A   F
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF 368

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            E PE+ +V+WNA+IS   QNG  +  +  F++M+++ + P++V++ ++LSAC+  G + 
Sbjct: 369 DESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLS 428

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G ++ + + +   L P      ++VD+  + G   EA +L   M  E + + W+++I  
Sbjct: 429 FG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFG 486

Query: 555 CRIHKNLEFAKKAADQLFKM 574
             +H     A K  +++  +
Sbjct: 487 YGLHGYGHEALKLYNEMLHL 506



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 229/485 (47%), Gaps = 5/485 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             N    + L+  Y K   +  AR++F+ M +R  V W  +I G  +   F ++ +LF +
Sbjct: 140 GSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFRE 199

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  D G   D  T   +L   +E       + +    +K G+     +   L+  Y K  
Sbjct: 200 MVAD-GVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCG 258

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ AR +F+ + + D +++NA+I+GF   G  E ++KLF E+   G + S  T    + 
Sbjct: 259 DVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIP 318

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                  + L   +H F VK+  + N  V+ A   +Y+K + +  AR LF E PE   V+
Sbjct: 319 LHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVA 378

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ Y  N   + ++ LF+E+  T F  +    +T+LS  A    L  G+ +H    
Sbjct: 379 WNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIK 438

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                  + V+ +LVDMYAKCG   EA ++F ++S  +TV W  MI  Y   G   EAL 
Sbjct: 439 SENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALK 498

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMY 421
           L+ EM     +    TF S+L A +    +  G+++ H+ V +      +   + ++D+ 
Sbjct: 499 LYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDIL 558

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
            +SG L+ A++  K+MP E     W  L+ AC  + D      + E + +    P SV  
Sbjct: 559 GRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE--LDPGSVGY 616

Query: 481 LSVLS 485
             +LS
Sbjct: 617 YVLLS 621


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/748 (35%), Positives = 425/748 (56%), Gaps = 3/748 (0%)

Query: 4   QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           Q  VS  N LIS     G +  A +LF  M +R  VSW  L+  YS +    ++F++F D
Sbjct: 177 QRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSD 236

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G    D  T  +L+S C+  D  +    VH+  ++ G +S + + N+LV+ Y    
Sbjct: 237 MRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAG 296

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A  +F  M ++D +S+N +I+ + + G N +A+K   ++ H    P   TF++AL 
Sbjct: 297 KLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALG 356

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      +  GR VHA  ++ +   N+ V N+L+ +Y K + + +A ++F  MP  D VS
Sbjct: 357 ACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVS 416

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQT 301
            N++I  YA  E   +++++F  ++      +      +L    +  DL+  G  +H  T
Sbjct: 417 CNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYT 476

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I    +S+  V+NSL+ MYAKCG  E +  +F  + + S V W AMI+A VQ G+ EE+L
Sbjct: 477 IHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESL 536

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF++M       D    A  + +SA LASL  G QLH   ++ G  ++    +A +DMY
Sbjct: 537 KLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMY 596

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + + ++   +   R    WN LIS  A+ G  +   ++F+ M+  G  PD V+ +
Sbjct: 597 GKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFV 656

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           ++LSACSH GL+++G+ Y+NSM+  + + P  +H   +VDIL R G F EAEK +  MP 
Sbjct: 657 TLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPV 716

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P++++W S+++S R HKNL+  +KAA +L +++   D+A YV +SN+YA + +W  V +
Sbjct: 717 LPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSA-YVLLSNLYATSARWSDVDR 775

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+  M+   + K+ A SW++ K +V  F   D  H   ++I  K++ ++ ++++ GY  D
Sbjct: 776 VRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVAD 835

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           TS ALHD DEE K ++L  HSE+LA+A+ LI  PEG  + + KNLR C DCH   KL+S 
Sbjct: 836 TSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSM 895

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  REI +RD  RFHHFK G CSC DFW
Sbjct: 896 VFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 228/460 (49%), Gaps = 9/460 (1%)

Query: 134 MP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-I 190
           MP   +   S+   I+G  + G +  A  +   M+  G   S F  A+ ++A     +  
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           A G  +HA   K   + NV++  ALL LY     V++A++LF EMPE + VS+  ++   
Sbjct: 61  ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           + N   +E+L  +R ++  R   +   F+T++S+  +  D   G Q+ +  IV+    +V
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQV 180

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            VANSL+ M    GR  +A+++F  +    TV W A++S Y  +G   ++  +F +M R 
Sbjct: 181 SVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRG 240

Query: 371 N-ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D  T  S++   A    +S G  +HS  +R+G  S +   +AL++MY+ +G L D
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLAD 300

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  M  R+++SWN +IS+  QNG+    LK+   ++ +   PD ++  S L ACS 
Sbjct: 301 AEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSS 360

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G + +G +  ++MT +  L        S++ +  +    ++AE++   MP   D +  +
Sbjct: 361 PGALMDG-RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP-NHDVVSCN 418

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            +I S  +   LE   KA    F M +      Y+ + NI
Sbjct: 419 ILIGSYAV---LEDGTKAMQVFFWMRRGEVKLNYITIVNI 455



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 227/456 (49%), Gaps = 7/456 (1%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANEL-I 93
           RT  SW   I G  +  +   AF +   MR  G     +   A+L++ C   +       
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGF-ALASLVTACERWEEGRACGA 64

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
            +HA   K G    + I  +L+  Y   + +  A+R+F EMP+++ VS+ AL+   +  G
Sbjct: 65  AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNG 124

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             EEA+  +  M+      +   FA  +S    L D   G QV + V+ +     V VAN
Sbjct: 125 HLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVAN 184

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ---FTR 270
           +L+ +      V +A KLF  M E D VS+N +++ Y+      +S ++F +++     R
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLR 244

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            D +     +L+SV A+   +  G  +H+  + T   S + V N+LV+MY+  G+  +A+
Sbjct: 245 HDATT--LCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAE 302

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F N+S    + W  MIS+YVQ GN  +AL    ++   N   D+ TF+S L A +   
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L  G+ +H+  ++     N+  G++L+ MY K  S++DA + F+ MP  ++VS N LI 
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + A   D    ++ F  M +   + + ++++++L +
Sbjct: 423 SYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGS 458



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N +  N LI+ Y K  ++  A  +F  M +   VS  ILIG Y+      +A ++F  
Sbjct: 380 HHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFW 439

Query: 63  MRTDGGSDPDYVTFATLL-SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           MR  G    +Y+T   +L S  S  D  N  + +HA  I  G+ S   + NSL+  Y K 
Sbjct: 440 MRR-GEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKC 498

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ +  VF+ +  +  VS+NA+I    + G  EE++KLF++M+H G        A  +
Sbjct: 499 GDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECM 558

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S+   LA +  G Q+H   +K     +  V NA +D+Y K   + E  K+  +       
Sbjct: 559 SSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQ 618

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            +N +I+ YA    +KE+ + F+ +           F TLLS  ++   +  G   +   
Sbjct: 619 CWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSM 678

Query: 302 IVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLE- 358
                +S  +K    +VD+  + GRF EA++   ++  + + + W +++S+     NL+ 
Sbjct: 679 SSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDI 738

Query: 359 --EALNLFIEM---------CRANISADQATFASILRASAELASLSLGK 396
             +A    +E+           +N+ A  A ++ + R  + + +++L K
Sbjct: 739 GRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNK 787


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/754 (35%), Positives = 439/754 (58%), Gaps = 19/754 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           +++ V  N L++ Y + G +A+AR +F+ M   R  VSWT +    ++    RE+  L  
Sbjct: 81  DRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIG 140

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDT-ANELIQVHADIIKFG-YNSILIICNSLVDSYC 119
           +M  + G  P+  T   +   C   +        V   + K G + + + + ++L+D   
Sbjct: 141 EM-LESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLA 199

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           +   L  AR+VF  + +K  V +  LI+ + +    EEA+++F++    GF+P  +T ++
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSS 259

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD---CVVEARKLFGEMP 236
            +SA   L  + LG Q+H+  ++  F  +  V+  L+D+Y+K +    +  A K+F  M 
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMR 319

Query: 237 EVDGVSYNVMITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           + D +S+  +I+ Y  +  Q  + + LF E+       +   +S++L   AN  D   GR
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGR 379

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   I +   +   V N+LV MYA+ G  EEA+ +F  L   S      MIS   +  
Sbjct: 380 QVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERS------MISCITEGR 433

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           +      L   + R ++    +TFAS++ A+A +  L+ G+QLH+  +++GF S+ F  +
Sbjct: 434 DAP----LDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSN 489

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L+ MY++ G L+DA ++F E+ +RN++SW ++IS  A++G A+  L  F DM+ +G +P
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ ++VLSACSH GL+ EG +YF SM + + L P+ EHYA MVD+L RSG   EA + 
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEF 609

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           + +MP + D ++W +++ +CR H N+E  + AA  + ++E  RD APYV +SN+YA AG 
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEP-RDPAPYVLLSNLYADAGL 668

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ V++++ AMR+  + K T  SW+E+++  H F A D  HP+  +I  K++ L+ E+K 
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKG 728

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY PDTS  LHD  +E+K + L  HSE++A+AF LI T    PI + KNLR C DCH+A
Sbjct: 729 MGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSA 788

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IK +SK T REI +RDS+RFH  KDG CSC ++W
Sbjct: 789 IKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 193/383 (50%), Gaps = 25/383 (6%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARK 230
           PSD +   A +A  G  D+ LGR +H  +++ + ++ +  VAN+LL LYS+   V  AR 
Sbjct: 48  PSDVSALLAAAARAG--DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARN 105

Query: 231 LFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-- 287
           +F  M  + D VS+  M +C A N   +ESL L  E+     +    P +  L  VA+  
Sbjct: 106 VFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM----LESGLLPNAYTLCAVAHAC 161

Query: 288 -------KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
                   +   +   +H   +  T   ++ V ++L+DM A+ G    A+++F  L   +
Sbjct: 162 FPHELYCLVGGVVLGLVHKMGLWGT---DIAVGSALIDMLARNGDLASARKVFDGLIEKT 218

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT +IS YVQ    EEA+ +F++        D+ T +S++ A  EL S+ LG QLHS
Sbjct: 219 VVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHS 278

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSG---SLKDAIQTFKEMPERNIVSWNALISACAQNG- 456
             +R GF S+      L+DMYAKS    ++  A + F+ M + +++SW ALIS   Q+G 
Sbjct: 279 LALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGV 338

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
                +  F +M+    +P+ ++  S+L AC++    + G Q    + +  +        
Sbjct: 339 QENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGN 398

Query: 517 ASMVDILCRSGCFDEAEKLMAQM 539
           A +V +   SGC +EA ++  Q+
Sbjct: 399 A-LVSMYAESGCMEEARRVFNQL 420



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 124/309 (40%), Gaps = 49/309 (15%)

Query: 390 ASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNA 447
             L LG+ LH  ++R   +  +    ++LL +Y++ G++  A   F  M   R+IVSW A
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           + S  A+NG  + +L    +M++SG  P++ +L +V  AC    L          +  K 
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181

Query: 508 KLRPKKEHYAS-MVDILCRSG-------------------------------CFDEAEKL 535
            L        S ++D+L R+G                               C +EA ++
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241

Query: 536 MAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
                   FEPD    SS+I++C    ++    +      +M    DA     + ++YA 
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK 301

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
           +   +++    K   ER +RK    SW  L S           + Q+     K+  L  E
Sbjct: 302 SNIEQAMDYANKVF-ER-MRKNDVISWTALISG----------YVQSGVQENKVMVLFGE 349

Query: 653 MKKEGYKPD 661
           M  E  KP+
Sbjct: 350 MLNESIKPN 358


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/706 (37%), Positives = 410/706 (58%), Gaps = 71/706 (10%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++ +Y K   +D     F ++PQ+DSVS+  +I G+   G   +AI++  +M   G +
Sbjct: 84  NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ FT    L++      +  G++VH+F+VK     NV V+N+LL++Y+K    + A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203

Query: 232 FGEMPEVDGVSYNVMITCY----------------------AWNEQYK---------ESL 260
           F  M   D  S+N MI  +                       WN              +L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA--ISEVKVANSLV 317
            +F + L+ +     +F  +++LS  AN   L IG+QIH+  IVTT   IS + V N+L+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH-IVTTGFDISGI-VLNALI 321

Query: 318 DMYAKCGRFE---------------------------------EAKEIFANLSHISTVPW 344
            MY++CG  E                                 +AK IF +L     V W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           TAMI  Y Q G+  EA+NLF  M       +  T A++L  ++ LASLS GKQ+H   ++
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
           SG + +V   +AL+ MYAK+G++  A + F  +  ER+ VSW ++I A AQ+G A+  L+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            FE M+  G +PD ++ + V SAC+H GL+ +G QYF+ M    K+ P   HYA MVD+ 
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            R+G   EA++ + +MP EPD + W S++++CR+HKN++  K AA++L  +E   ++  Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP-ENSGAY 620

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            A++N+Y+  G+WE  ++++K+M++  V+K   +SW+E+K KVHVF   D  HP+ NEI 
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
             ++ +  E+KK GY PDT+  LHD +EE+K + L++HSE+LAIAF LI+TP+ + + +M
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C DCH AIK ISK+ GREI VRD++RFHHFKDGFCSCRD+W
Sbjct: 741 KNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 274/591 (46%), Gaps = 75/591 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +   S N ++S Y K G++ +  E F+ +  R +VSWT +I GY    Q+ +A ++ 
Sbjct: 75  MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            DM  + G +P   T   +L+  +         +VH+ I+K G    + + NSL++ Y K
Sbjct: 135 GDMVKE-GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193

Query: 121 -------------------------------IRCLDLARRVFKEMPQKDSVSFNALITGF 149
                                          +  +DLA   F++M ++D V++N++I+GF
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253

Query: 150 AKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + G +  A+ +F +M +     P  FT A+ LSA   L  + +G+Q+H+ +V T F  +
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313

Query: 209 VFVANALLDLYSKHDCVVEARKL-----------------------FGEMPEV------- 238
             V NAL+ +YS+   V  AR+L                        G+M +        
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373

Query: 239 ---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D V++  MI  Y  +  Y E++ LFR +       + +  + +LSV ++   L  G+
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           QIH   + +  I  V V+N+L+ MYAK G    A   F  +     TV WT+MI A  Q 
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ EEAL LF  M    +  D  T+  +  A      ++ G+Q    +     +    S 
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            A ++D++ ++G L++A +  ++MP E ++V+W +L+SAC  + +      + E ++   
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL-- 611

Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
            +P++    S L+   S CG  EE  +   SM      R KKE   S +++
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG---RVKKEQGFSWIEV 659



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 216/496 (43%), Gaps = 99/496 (19%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-------------------- 235
           VH  V+K+  + +V++ N L+++YSK    + ARKLF EM                    
Sbjct: 36  VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95

Query: 236 -----------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
                      P+ D VS+  MI  Y    QY +++++  ++     + +QF  + +L+ 
Sbjct: 96  MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI------------ 332
           VA    ++ G+++H+  +       V V+NSL++MYAKCG    AK +            
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215

Query: 333 -------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-I 372
                              F  ++    V W +MIS + Q+G    AL++F +M R + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGF------------MSNVFSG------ 414
           S D+ T AS+L A A L  L +GKQ+HS ++ +GF            M +   G      
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335

Query: 415 ---------------SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
                          +ALLD Y K G +  A   F  + +R++V+W A+I    Q+G   
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             +  F  MV  G +P+S +L ++LS  S    +  G Q   S  +  ++       A +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA-L 454

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR- 578
           + +  ++G    A +    +  E D + W+S+I +   H + E A +  + +  ME LR 
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRP 513

Query: 579 DAAPYVAMSNIYAVAG 594
           D   YV + +    AG
Sbjct: 514 DHITYVGVFSACTHAG 529



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 229/533 (42%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N +I+ +++ G +  A   F  M +R  V+W  +I G++Q+     A  +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV----- 115
             M  D    PD  T A++LS C+  +      Q+H+ I+  G++   I+ N+L+     
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326

Query: 116 ----------------------------DSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                       D Y K+  ++ A+ +F  +  +D V++ A+I 
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G   EAI LF  M   G +P+ +T AA LS    LA ++ G+Q+H   VK+  + 
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +V V+NAL+ +Y+K   +  A + F  +  E D VS+  MI   A +   +E+L+LF  +
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
                      +  + S   +   +  GRQ                     DM       
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQ-------------------YFDM------M 541

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           ++  +I   LSH     +  M+  + + G L+EA   FIE  +  I  D  T+ S+L A 
Sbjct: 542 KDVDKIIPTLSH-----YACMVDLFGRAGLLQEAQE-FIE--KMPIEPDVVTWGSLLSAC 593

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
               ++ LGK     ++    +    SG  SAL ++Y+  G  ++A +  K M +  +  
Sbjct: 594 RVHKNIDLGKVAAERLL---LLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKK 650

Query: 443 ---VSWNALISAC----------AQNGDAQATLKSFEDMVQS-GYQPDSVSLL 481
               SW  +               +  +   T+K   D ++  GY PD+ S+L
Sbjct: 651 EQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 106/217 (48%), Gaps = 12/217 (5%)

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H  VI+SG M +V+  + L+++Y+K+G    A + F EMP R   SWN ++SA ++ GD
Sbjct: 36  VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             +T + F+ + Q     DSVS  +++    + G   + ++    M  K  + P +    
Sbjct: 96  MDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMV-KEGIEPTQFTLT 150

Query: 518 SMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +++  +  + C +  +K+   + ++    +  + +S++N      +   AK   D++   
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV-- 208

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
             +RD + + AM  ++   GQ +      + M ER +
Sbjct: 209 --VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/771 (36%), Positives = 420/771 (54%), Gaps = 80/771 (10%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            + +N  I+ ++++G +A A  LF +M  R+  ++  ++ GYS   +   A  LF  +  
Sbjct: 38  VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI-- 95

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                PD  ++ TLL               HA          L + +SL D         
Sbjct: 96  ---PRPDNYSYNTLL---------------HA----------LAVSSSLAD--------- 118

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F EMP +DSV++N +I+  A  GL   A   F     L  +    ++   L+A V
Sbjct: 119 -ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF----DLAPEKDAVSWNGMLAAYV 173

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               +   R +  F  +T +  +V   NAL+  Y +   + EAR+LF  MP  D VS+N+
Sbjct: 174 RNGRVEEARGL--FNSRTEW--DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNI 229

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M++ YA      E+ +LF         R  F ++ ++S  A    L+  R++        
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN 285

Query: 306 AIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           A+S                            V   N+++  YA+ G  EEAK +F  +  
Sbjct: 286 AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              V W AM++AY Q G  EE L LFIEM R     +++ FA +L   A++A+L  G QL
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  +IR+G+    F G+ALL MY K G+++DA   F+EM ER++VSWN +I+  A++G  
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L+ F+ M  +  +PD ++L+ VL+ACSH GL+E+G+ YF SM   + +  K EHY  
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           M+D+L R+G   EA  LM  MPFEPD  MW +++ + RIH+N E  + AA+++F++E   
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP-E 584

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           +A  YV +SNIYA +G+W    +++  M ERGV+KV  +SW+E+++KVH F+A D +HP+
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
             +I   +E+L   MKK GY   T   LHD +EE K   LKYHSE+LA+A+ ++N P G 
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           PI V+KNLR C DCH A K IS I GR I +RDS+RFHHF+ G CSC D+W
Sbjct: 705 PIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 185/378 (48%), Gaps = 40/378 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +S N L+SGYV+ G ++ ARELF+ M  R  VSW I++ GY+++    EA +LF    
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---- 247

Query: 65  TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSI-------------- 107
            D     D  T+  ++SG ++    + A  +     +     +N++              
Sbjct: 248 -DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 306

Query: 108 ----LIIC------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
               ++ C      N+++  Y +   L+ A+ VF  MPQKD+VS+ A++  +++ G +EE
Sbjct: 307 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
            ++LF+EM   G   +   FA  LS    +A +  G Q+H  +++  +    FV NALL 
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   + +AR  F EM E D VS+N MI  YA +   KE+L++F  ++ T        
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 278 FSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
              +L+  ++   ++ G      +H    VT   ++ +    ++D+  + GR  EA ++ 
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVT---AKPEHYTCMIDLLGRAGRLAEAHDLM 543

Query: 334 ANLS-HISTVPWTAMISA 350
            ++     +  W A++ A
Sbjct: 544 KDMPFEPDSTMWGALLGA 561



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 50/341 (14%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV  +N  +  + + GR  +A+ +FA +   ST  + AM++ Y   G L  A +LF    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF---- 92

Query: 369 RANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           RA    D  ++ ++L A A  +SL+  + L     +R     NV     ++  +A  G +
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F   PE++ VSWN +++A  +NG  +     F     S  + D +S  +++S  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSGY 203

Query: 488 SHCGLIEEGLQYF-----------NSMTQKYKLR-------------PKKE--HYASMVD 521
              G + E  + F           N M   Y  R             P ++   + ++V 
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
              ++G  +EA ++   MP E + + W++++ +    + ++ AK    +LF M   R+ A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVA 318

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
            +  M   YA AG  E    V   M ++      A SW  +
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQK-----DAVSWAAM 354


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/781 (34%), Positives = 422/781 (54%), Gaps = 37/781 (4%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++   ++  ++ Y K   +  A+ +F+ M  R  V+W  L   Y      ++   +F +M
Sbjct: 174 EDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREM 233

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             DG   PD VT + +LS CS+         +H   +K G    + + N+LV+ Y    C
Sbjct: 234 VLDG-VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLC 292

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A+ VF  MP ++ +++N+L + +   G  ++ + +F EM   G KP     ++ L A
Sbjct: 293 VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D+  G+ +H F VK   VE+VFV  AL++LY+   CV EA+ +F  MP  + V++
Sbjct: 353 CSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTW 412

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N + +CY      ++ L +FRE+             ++L   ++  DL+ G+ IH   + 
Sbjct: 413 NSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR 472

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              + +V V N+L+ +YAKC    EA+ +F  + H     W  +++AY      E+ L +
Sbjct: 473 HGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYM 532

Query: 364 FIEMCRANISADQATFA-----------------------------------SILRASAE 388
           F +M R  + AD+ T++                                   SILRA + 
Sbjct: 533 FSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSL 592

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
              L +GK++H +V R     ++   +AL+DMYAK G L  +   F  MP +++ SWN +
Sbjct: 593 SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTM 652

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I A   +G+ +  L  FE M+ S  +PDS +   VLSACSH  L+EEG+Q FNSM++ + 
Sbjct: 653 IFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHL 712

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P+ EHY  +VDI  R+GC +EA   + +MP EP  I W + +  CR++KN+E AK +A
Sbjct: 713 VEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISA 772

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            +LF+++    +A YV + NI   A  W   S+++K M+ERG+ K    SW  + ++VH 
Sbjct: 773 KKLFEIDP-NGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHT 831

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F A D+ + ++++I   ++ L  ++K  GYKPDT   LHD D+E K ESL  HSE+LA+A
Sbjct: 832 FVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVA 891

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F ++N    S I V KNLR C DCH AIK +S + G  I VRDS RFHHFK+G CSC+DF
Sbjct: 892 FGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDF 951

Query: 749 W 749
           W
Sbjct: 952 W 952



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/560 (30%), Positives = 278/560 (49%), Gaps = 40/560 (7%)

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           EA K++   R  G   PD   F  +   C+    A ++ Q H D  + G  S + I N+ 
Sbjct: 23  EAIKIYTSSRARG-IKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           + +Y K +C++ ARRVF ++  +D V++N+L   +   G  ++ + +F +M     K + 
Sbjct: 82  IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            T ++ L     L D+  G+++H FVV+   VE+VFV++A ++ Y+K  CV EA+ +F  
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  D V++N + +CY      ++ L +FRE+            S +LS  ++  DL+ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           + IH   +    +  V V+N+LV++Y  C    EA+ +F  + H + + W ++ S YV  
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  ++ LN+F EM    +  D    +SIL A ++L  L  GK +H F ++ G + +VF  
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +AL+++YA    +++A   F  MP RN+V+WN+L S     G  Q  L  F +MV +G +
Sbjct: 382 TALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVK 441

Query: 475 PDSVSLLSVLSACS-----HCGLIEEGLQYFNSMTQK----------------------- 506
           PD V++LS+L ACS       G +  G    + M +                        
Sbjct: 442 PDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVV 501

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEK---LMAQM---PFEPDEIMWSSVINSC----R 556
           + L P +E  AS   IL       E EK   + +QM     + DEI WS VI  C    R
Sbjct: 502 FDLIPHRE-VASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSR 560

Query: 557 IHKNLEFAKKAADQLFKMEK 576
           I + +E  +K     FK ++
Sbjct: 561 IEEAMEIFRKMQTMGFKPDE 580



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 211/423 (49%), Gaps = 5/423 (1%)

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            GL  EAIK++   +  G KP    F A   A     D    +Q H    +   + +V +
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NA +  Y K  CV  AR++F ++   D V++N +  CY      ++ L +FR++   + 
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
             +    S++L   ++  DL+ G++IH   +    + +V V+++ V+ YAKC    EA+ 
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  + H   V W ++ S YV  G  ++ LN+F EM    +  D  T + IL A ++L  
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L  GK +H F ++ G + NVF  +AL+++Y     +++A   F  MP RN+++WN+L S 
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
               G  Q  L  F +M  +G +PD +++ S+L ACS    ++ G +  +    K+ +  
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGMVE 376

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
                 ++V++     C  EA+ +   MP   + + W+S ++SC +  N  F +K  +  
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSCYV--NCGFPQKGLNVF 432

Query: 572 FKM 574
            +M
Sbjct: 433 REM 435



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 6/241 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           +P++   S N +++ Y  +        +F+ M    V    ++W+++IGG  + ++  EA
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            ++F  M+T  G  PD  T  ++L  CS  +      ++H  + +   +  L   N+LVD
Sbjct: 565 MEIFRKMQT-MGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVD 623

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L L+R VF  MP KD  S+N +I      G  +EA+ LF +M     KP   T
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSAT 683

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
           F   LSA      +  G Q+   + + + VE        ++D+YS+  C+ EA      M
Sbjct: 684 FTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRM 743

Query: 236 P 236
           P
Sbjct: 744 P 744



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 7/224 (3%)

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           +  G   EA+ ++       I  D+  F ++ +A A        KQ H    R G MS+V
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN-GDAQATLKSFEDMVQ 470
             G+A +  Y K   ++ A + F ++  R++V+WN+L SAC  N G  Q  L  F  M  
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSL-SACYVNCGFPQQGLNVFRKMGL 134

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           +  + + +++ S+L  CS    ++ G +  +    ++ +       ++ V+   +  C  
Sbjct: 135 NKVKANPLTVSSILPGCSDLQDLKSGKE-IHGFVVRHGMVEDVFVSSAFVNFYAKCLCVR 193

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           EA+ +   MP   D + W+S ++SC +  N  F +K  +   +M
Sbjct: 194 EAQTVFDLMPHR-DVVTWNS-LSSCYV--NCGFPQKGLNVFREM 233


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/655 (38%), Positives = 394/655 (60%), Gaps = 5/655 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA +I   +  + ++ N+L+  Y K   + LAR VF  MP +++VS N L++G+A  G 
Sbjct: 33  LHARLITAAHFDV-VLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGR 91

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           ++E+++L   ++ + F  +++  +AA+SA   +    +GRQ H + VK  F E  +V NA
Sbjct: 92  HKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNA 148

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L +Y +   + +A K+F  +   D  ++N MI  Y    Q   SL + R +        
Sbjct: 149 VLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWD 208

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              +  +L   A+  D  +G Q+H Q +       V V ++LVDMY KC    +A   F 
Sbjct: 209 YVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFE 268

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            L   + V WTA+++AY Q    E+AL LF++M    +  ++ T+A  L + A LA+L  
Sbjct: 269 VLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRT 328

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  L + V+++G   ++   +AL++MY+KSGS++DA + F  MP R++VSWN +I+  A 
Sbjct: 329 GNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAH 388

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G A+  +++F  M+ +   P  V+ + VLSAC+  GL++E   Y N+M ++  + P KE
Sbjct: 389 HGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKE 448

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  MV +LCR G  DEAE+ +       D + W S++NSC+++KN     + A+Q+ ++
Sbjct: 449 HYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQL 508

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           E   D   YV +SN+YA A +W+ V +V+K MRER VRK    SW+ + S VHVFT+ ++
Sbjct: 509 EP-SDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEK 567

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
           +HPQ ++I +K+E L+ ++K  GY P+ +  LHD D+E K E L YHSE+LA+AF LI+T
Sbjct: 568 VHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHT 627

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P+G+ I +MKNLR C DCH AIKLIS +T R+I VRD+ RFH  + G CSC D+W
Sbjct: 628 PKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 233/483 (48%), Gaps = 8/483 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N LIS Y K G +  AR +F++M  R AVS  +L+ GY+   + +E+ +L   +R
Sbjct: 44  DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL---LR 100

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                  +YV  A + S  +   + +   Q H   +K G+     + N+++  YC+   +
Sbjct: 101 VVDFGMNEYVLSAAV-SATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHM 159

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A +VF+ +   D+ +FN++I G+   G  + ++ +   M     K    ++ A L   
Sbjct: 160 EDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHC 219

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             + D  LG QVHA  +K     NV+V +AL+D+Y K D V +A + F  +PE + VS+ 
Sbjct: 220 ASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWT 279

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++T Y  NE Y+++L+LF +++      ++F ++  L+  A    L+ G  +    + T
Sbjct: 280 AVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKT 339

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V+N+L++MY+K G  E+A  +F ++     V W  +I+ Y   G   E +  F
Sbjct: 340 GHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAF 399

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
             M  A +     TF  +L A A+L  +      L++ +   G        + ++ +  +
Sbjct: 400 HSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCR 459

Query: 424 SGSLKDAIQ-TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
            G L +A +         ++V+W +L+++C    +     +  E ++Q   +P  V    
Sbjct: 460 VGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQ--LEPSDVGTYV 517

Query: 483 VLS 485
           +LS
Sbjct: 518 LLS 520



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 222/516 (43%), Gaps = 105/516 (20%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELF-------NSMVDRTAVSWTILI--------- 44
           MP +N VS N+L+SGY  SG    + +L        N  V   AVS T  +         
Sbjct: 71  MPFRNAVSANLLMSGYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQC 130

Query: 45  GGYSQKNQFRE----------------------------------AFKLFVDMRTDGGS- 69
            GY+ K  F E                                  AF   ++   D G  
Sbjct: 131 HGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQL 190

Query: 70  ---------------DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
                            DYV++  +L  C+    +    QVHA  +K      + + ++L
Sbjct: 191 DGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSAL 250

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           VD Y K   +  A R F+ +P+K+ VS+ A++T + +  L E+A++LF++M+  G +P++
Sbjct: 251 VDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNE 310

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT+A AL++  GLA +  G  + A V+KT   +++ V+NAL+++YSK   + +A ++F  
Sbjct: 311 FTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFIS 370

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  D VS+N++IT YA +   +E ++ F  +       S   F  +LS  A     Q+G
Sbjct: 371 MPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACA-----QLG 425

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
                   + T + EV +                 KE            +T M+    + 
Sbjct: 426 LVDEAFYYLNTMMKEVGIT--------------PGKE-----------HYTCMVGLLCRV 460

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G L+EA    +  C   I  D   + S+L +     +  LG ++   +++    S+V + 
Sbjct: 461 GRLDEAERFIVNNC---IGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLE-PSDVGTY 516

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNI-----VSW 445
             L +MYAK+      ++  K M ER +     VSW
Sbjct: 517 VLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSW 552



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 114/308 (37%), Gaps = 59/308 (19%)

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             LS GK LH+ +I +     V   + L+  YAK G +  A   F  MP RN VS N L+
Sbjct: 25  GDLSKGKALHARLITAAHFDVVLHNN-LISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83

Query: 450 SACAQNG-------------------------DAQATLKSFEDM--------VQSGYQPD 476
           S  A +G                          A A ++S+ DM        V++G+   
Sbjct: 84  SGYASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSY-DMGRQCHGYAVKAGFAEQ 142

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
                +VL     C  +E+  + F S++           + SM++     G  D +  ++
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFA-----FNSMINGYLDRGQLDGSLGIV 197

Query: 537 AQMPFEP---DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
             M  E    D + + +V+  C   K+     +   Q  K     +     A+ ++Y   
Sbjct: 198 RNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKC 257

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
                 ++  + + E+ V   TA           V TA  +     NE+      L  +M
Sbjct: 258 DHVHDANRAFEVLPEKNVVSWTA-----------VMTAYTQ-----NELYEDALQLFLDM 301

Query: 654 KKEGYKPD 661
           + EG +P+
Sbjct: 302 EMEGVQPN 309


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/705 (36%), Positives = 404/705 (57%), Gaps = 32/705 (4%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A  L  C + D  +    +H +I+K G    L   N L++ Y K   L  A ++F EMP
Sbjct: 41  YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++++SF  LI G+A+     EAI+LFV +   G + + F F   L   V      LG  
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWG 160

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA + K     N FV  AL+D YS    V  AR++F  +   D VS+  M+TC+A N+ 
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDC 220

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           +KE+LKLF +++   F  + F F+++           +G+ +H   + +    ++ V  +
Sbjct: 221 FKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y K G  ++A+  F  +     +PW+ MI+ Y Q    +EA+ +F +M +A +  +
Sbjct: 281 LLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q TFAS+L+A A +  L+LG Q+H  VI+ G  S+VF  +AL+D+YAK G ++++++ F 
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 400

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ--------------------- 474
           E P RN V+WN +I    Q GD +  L+ F +M++   Q                     
Sbjct: 401 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 460

Query: 475 ----------PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
                     PD ++ + VLSAC++ GL+++G  YF SM Q + + P  EHY  MV +L 
Sbjct: 461 GLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLG 520

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R G  D+A KL+ ++PF+P  ++W +++ +C IH ++E  + +A ++ +ME  +D A +V
Sbjct: 521 RGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEP-QDKATHV 579

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            +SN+YA A +W++V+ V+K M+ +GV+K    SW+E +  VH FT  D  HP+   I  
Sbjct: 580 LLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVING 639

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
            +E L  + KK GY P+ +  L D ++E K   L  HSERLA++F +I TP GSPI +MK
Sbjct: 640 MLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMK 699

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCHAAIK ISK+  REI VRD +RFHHF++G CSC D+W
Sbjct: 700 NLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 268/483 (55%), Gaps = 34/483 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ YVKS  L  A +LF+ M +R  +S+  LI GY++  +F EA +LFV +  +G  
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHE 136

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +V F T+L      D       +HA I K G+ S   +  +L+D+Y     +D+AR 
Sbjct: 137 LNPFV-FTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVARE 195

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  KD VS+  ++T FA+    +EA+KLF +M+ +GFKP++FTFA+   A +GL  
Sbjct: 196 VFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEA 255

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G+ VH   +K+ +  +++V  ALLDLY+K   + +AR+ F E+P+ D + ++ MI  
Sbjct: 256 FDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIAR 315

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA ++Q KE++++F +++      +QF F+++L   A    L +G QIH   I     S+
Sbjct: 316 YAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSD 375

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V+N+L+D+YAKCGR E + E+FA   H + V W  +I  +VQ G+ E+AL LF+ M  
Sbjct: 376 VFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLE 435

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS--NVFSGSA---LLD----- 419
             + A + T++S LRA A LA+L  G Q+HS  ++   ++   V S  A   LLD     
Sbjct: 436 YRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAY 495

Query: 420 ----------------------MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
                                 +  + G L  A++   E+P + +++ W AL+ AC  + 
Sbjct: 496 FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN 555

Query: 457 DAQ 459
           D +
Sbjct: 556 DIE 558



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 13/191 (6%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K G +  + ELF     R  V+W  +I G+ Q     +A +LF++M  +  
Sbjct: 379 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM-LEYR 437

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
                VT+++ L  C+        +Q+H+  +K    + + + ++  ++      LD  +
Sbjct: 438 VQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANA----GLLDQGQ 493

Query: 129 RVFKEMPQKDSVS-----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             F  M Q   +      +  ++    + G  ++A+KL  E+    F+PS   + A L A
Sbjct: 494 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGA 550

Query: 184 GVGLADIALGR 194
            V   DI LGR
Sbjct: 551 CVIHNDIELGR 561


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/771 (36%), Positives = 419/771 (54%), Gaps = 80/771 (10%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            + +N  I+ ++++G +A A  LF +M  R+  ++  ++ GYS   +   A  LF  +  
Sbjct: 38  VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI-- 95

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                PD  ++ TLL               HA          L + +SL D         
Sbjct: 96  ---PRPDNYSYNTLL---------------HA----------LAVSSSLAD--------- 118

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F EMP +DSV++N +I+  A  GL   A   F     L  +    ++   L+A V
Sbjct: 119 -ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF----DLAPEKDAVSWNGMLAAYV 173

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               +   R +  F  +T +  +    NAL+  Y +   + EAR+LF  MP  D VS+N+
Sbjct: 174 RNGRVEEARGL--FNSRTEW--DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNI 229

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M++ YA      E+ +LF         R  F ++ ++S  A    L+  R++        
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN 285

Query: 306 AIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           A+S                            V   N+++  YA+ G  EEAK +F  +  
Sbjct: 286 AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              V W AM++AY Q G  EE L LFIEM R     +++ FA +L   A++A+L  G QL
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  +IR+G+    F G+ALL MY K G+++DA   F+EM ER++VSWN +I+  A++G  
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L+ F+ M  +  +PD ++L+ VL+ACSH GL+E+G+ YF SM   + +  K EHY  
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           M+D+L R+G   EA  LM  MPFEPD  MW +++ + RIH+N E  + AA+++F++E   
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP-E 584

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           +A  YV +SNIYA +G+W    +++  M ERGV+KV  +SW+E+++KVH F+A D +HP+
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
             +I   +E+L   MKK GY   T   LHD +EE K   LKYHSE+LA+A+ ++N P G 
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           PI V+KNLR C DCH A K IS I GR I +RDS+RFHHF+ G CSC D+W
Sbjct: 705 PIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 185/378 (48%), Gaps = 40/378 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +S N L+SGYV+ G ++ ARELF+ M  R  VSW I++ GY+++    EA +LF    
Sbjct: 192 DAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---- 247

Query: 65  TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSI-------------- 107
            D     D  T+  ++SG ++    + A  +     +     +N++              
Sbjct: 248 -DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 306

Query: 108 ----LIIC------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
               ++ C      N+++  Y +   L+ A+ VF  MPQKD+VS+ A++  +++ G +EE
Sbjct: 307 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
            ++LF+EM   G   +   FA  LS    +A +  G Q+H  +++  +    FV NALL 
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   + +AR  F EM E D VS+N MI  YA +   KE+L++F  ++ T        
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 278 FSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
              +L+  ++   ++ G      +H    VT   ++ +    ++D+  + GR  EA ++ 
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVT---AKPEHYTCMIDLLGRAGRLAEAHDLM 543

Query: 334 ANLS-HISTVPWTAMISA 350
            ++     +  W A++ A
Sbjct: 544 KDMPFEPDSTMWGALLGA 561



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 50/341 (14%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV  +N  +  + + GR  +A+ +FA +   ST  + AM++ Y   G L  A +LF    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF---- 92

Query: 369 RANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           RA    D  ++ ++L A A  +SL+  + L     +R     NV     ++  +A  G +
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F   PE++ VSWN +++A  +NG  +     F     S  + D++S  +++S  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDAISWNALMSGY 203

Query: 488 SHCGLIEEGLQYF-----------NSMTQKYKLR-------------PKKE--HYASMVD 521
              G + E  + F           N M   Y  R             P ++   + ++V 
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
              ++G  +EA ++   MP E + + W++++ +    + ++ AK    +LF M   R+ A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVA 318

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
            +  M   YA AG  E    V   M ++      A SW  +
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQK-----DAVSWAAM 354


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/657 (39%), Positives = 387/657 (58%), Gaps = 40/657 (6%)

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           + R L  AR +F +MP++D VS+NA+++G+A+ G  +EA ++F EM       +  ++  
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNG 97

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A V    I   R++  F  K ++   +   N ++  Y K + +V+AR +F  MPE D
Sbjct: 98  MLAAYVQNGRIEDARRL--FESKADW--ELISWNCMMGGYVKRNRLVDARGIFDRMPERD 153

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N MI+ YA N +  E+ +LF E       R  F ++ ++S       L   R++  
Sbjct: 154 EVSWNTMISGYAQNGELLEAQRLFEESPV----RDVFTWTAMVSGYVQNGMLDEARRVFD 209

Query: 300 QTIVTTAIS---------------------------EVKVANSLVDMYAKCGRFEEAKEI 332
                 ++S                            V   N+++  YA+ G   +A+  
Sbjct: 210 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 269

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +    ++ W A+I+ Y Q G  EEAL+LF+EM R     +++TF S L   AE+A+L
Sbjct: 270 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LGKQ+H  V+++G  S  + G+ALL MY K G++ DA   F+ + E+ +VSWN +I+  
Sbjct: 330 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 389

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A++G  +  L  FE M ++G  PD V+++ VLSACSH GL+++G +YF SMTQ Y +   
Sbjct: 390 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 449

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            +HY  M+D+L R+G  D+A+ LM  MPFEPD   W +++ + RIH N E  +KAA  +F
Sbjct: 450 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIF 509

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           +ME   ++  YV +SN+YA +G+W  V +++  MR+RGV+KV  YSWVE+++K+H FT  
Sbjct: 510 EMEP-DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVG 568

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D +HP+ + I   +E L  +MKKEGY   T   LHD +EE KV  LKYHSE+LA+AF ++
Sbjct: 569 DSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL 628

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             P G PI V+KNLR C DCH A+K ISKI GR I +RDS RFHHF  G CSC D+W
Sbjct: 629 AIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 56/489 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N++S N +++ YV++G +  AR LF S  D   +SW  ++GGY ++N+  +A  +F
Sbjct: 87  MPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIF 146

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + D V++ T++SG ++     EL++      +     +     ++V  Y +
Sbjct: 147 DRM-----PERDEVSWNTMISGYAQ---NGELLEAQRLFEESPVRDVFT-WTAMVSGYVQ 197

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD ARRVF  MP+K+SVS+NA+I G+ +    ++A +LF  M               
Sbjct: 198 NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMP-------------- 243

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
                                     +NV   N ++  Y+++  + +AR  F  MP+ D 
Sbjct: 244 -------------------------CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 278

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           +S+  +I  YA +   +E+L LF E++    R +RS F  ++ LS  A    L++G+Q+H
Sbjct: 279 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF--TSTLSTCAEIAALELGKQVH 336

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            + +     S   V N+L+ MY KCG  ++A  +F  +     V W  MI+ Y + G  +
Sbjct: 337 GRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGK 396

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSAL 417
           EAL LF  M +  I  D  T   +L A +    +  G +  +S     G  +N    + +
Sbjct: 397 EALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCM 456

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +D+  ++G L DA    K MP E +  +W AL+ A   +G+ +   K+ + + +   +PD
Sbjct: 457 IDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE--MEPD 514

Query: 477 SVSLLSVLS 485
           +  +  +LS
Sbjct: 515 NSGMYVLLS 523


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/670 (37%), Positives = 384/670 (57%), Gaps = 33/670 (4%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+L+ +    R +    R+F  MP++D+VS+NALITGF+  G    +++L+   ++    
Sbjct: 83  NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P+  T +A +     L+D ALG  VH  V++  F    FV + L+D+Y+K   + +AR+
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202

Query: 231 LFGEMP-------------------------------EVDGVSYNVMITCYAWNEQYKES 259
           +F EM                                + D +++  M+T    N    E+
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L +FR ++       Q+ F ++L+        + G+QIH     T     V V ++LVDM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDM 322

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KC     A+ +F  ++  + + WTAMI  Y Q    EEA+  F EM    I  D  T 
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG M  +   +AL+ +Y K GS++DA + F EM  
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            + VSW AL++  AQ G A+ T+  FE M+ +G +PD V+ + VLSACS  GL+E+G  Y
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDY 502

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F+SM + + + P  +HY  M+D+  RSG F EAE+ + QMP  PD   W+++++SCR+  
Sbjct: 503 FDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N+E  K AA+ L + +  ++ A YV + +++A  GQW  V+ +++ MR+R V+K    SW
Sbjct: 563 NMEIGKWAAENLLETDP-QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW 621

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ K+KVH+F+A+D+ HP ++ I  K+E L  +M +EGYKPD S  LHD  +  KV  + 
Sbjct: 622 IKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           +HSE+LAIAF LI  P+  PI ++KNLR C DCH A K ISKITGR+I VRD+ RFH F 
Sbjct: 682 HHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFS 741

Query: 740 DGFCSCRDFW 749
           DG CSC DFW
Sbjct: 742 DGTCSCGDFW 751



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 250/520 (48%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+ N  + N L+S    S  +     LF SM +R AVS+  LI G+S       + +L+
Sbjct: 74  MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +  +    P  +T + ++   S          VH  +++ G+ +   + + LVD Y K
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193

Query: 121 IRCLDLARRVFKEMPQK-------------------------------DSVSFNALITGF 149
           +  +  ARRVF+EM  K                               DS+++  ++TG 
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  EA+ +F  M+  G     +TF + L+A   LA    G+Q+HA++ +T + +NV
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNV 313

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+YSK   +  A  +F  M   + +S+  MI  Y  N   +E+++ F E+Q  
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F   +++S  AN   L+ G Q H   +V+  +  + V+N+LV +Y KCG  E+A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +S    V WTA+++ Y Q G  +E ++LF +M    +  D  TF  +L A +  
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA 493

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNA 447
             +  G      + +   +  +    + ++D+Y++SG  K+A +  K+MP   +   W  
Sbjct: 494 GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C   G+ +    + E+++++  Q P S  LL  + A
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHA 593



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 124/295 (42%), Gaps = 49/295 (16%)

Query: 379 FASILRASAE---LASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTF 434
           +A+IL ++A       + +   +H  ++++   +   F  + LL  YAKSG L  A + F
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EMP+ N+ + NAL+SA A +      +   E +  S  + D+VS  ++++  S  G   
Sbjct: 72  DEMPDPNLFTRNALLSALAHS----RLVPDMERLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASM----------------------------------- 519
             +Q + ++ ++  +RP +   ++M                                   
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPL 187

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           VD+  + G   +A ++  +M  +   +M++++I      K +E AK     LF++   RD
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKT-VVMYNTLITGLLRCKMIEDAKG----LFQLMVDRD 242

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           +  +  M       G       V + MR  GV  +  Y++  + +      A++E
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGV-GIDQYTFGSILTACGALAASEE 296


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/704 (37%), Positives = 393/704 (55%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NSL+  Y K   L  AR VF EMP++D VS+  ++ G  + G   EAIK+F++M   G  
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ FT    LS+        +GR+VH+FVVK      V VAN++L++Y K      AR +
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLF---------------------------- 263
           F  MPE    S+N M++  A   +   +L LF                            
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279

Query: 264 ----RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
               R L ++     +F  +++LS  AN   + IG+Q+H   + +      +V N+L+ M
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                  A+E+F  +S+   V WTA
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTA 399

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G+ +EA+ LF  M R+    +  T A++L   A LA L  GKQ+H   IRS 
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSF 465
              +    ++++ MYA+SGSL  A + F  +  R   V+W ++I A AQ+G  +  +  F
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E+M++ G +PD ++ + VLSAC+H G ++EG +YF  +  K+ + P+  HYA MVD+L R
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLAR 579

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G F EA++ + QMP EPD I W S++++CR+HKN + A+ AA++L  ++     A Y A
Sbjct: 580 AGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGA-YSA 638

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+Y+  G+W   +++ K  +++ V+K T +SW  + ++VHVF A+D LHPQ + + R 
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
              +  ++KK G+ PD    LHD D+E+K E L  HSE+LAIAF L++TPE + + +MKN
Sbjct: 699 AAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKN 758

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH AIK ISK+  REI +RD++RFHHFKDGFCSC+D+W
Sbjct: 759 LRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 271/555 (48%), Gaps = 71/555 (12%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N  + N L+S Y KSG LA AR +F  M +R  VSWT+++ G ++  +F EA K+F+DM
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK--- 120
            TDG S P   T   +LS C+  +      +VH+ ++K G +S + + NS+++ Y K   
Sbjct: 154 VTDGLS-PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212

Query: 121 ----------------------------IRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
                                       +  +DLA  +F+ MP +  VS+NA+I G+ + 
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272

Query: 153 GLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           GLN +A+  F  M  +    P +FT  + LSA   L  +++G+QVHA+++++       V
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332

Query: 212 ANALLDLYSKHDCV---------------------------------VEARKLFGEMPEV 238
            NAL+ +Y+K   V                                   AR++F  M   
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D V++  MI  Y  N    E+++LFR +  +  + + +  + +LSV A+   L+ G+QIH
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIH 452

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            + I +       V+NS+V MYA+ G    A+ +F  +     TV WT+MI A  Q G  
Sbjct: 453 CKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLG 512

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSA 416
           E+A+ LF EM R  +  D+ TF  +L A   +  +  GK+       + G +  +   + 
Sbjct: 513 EDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYAC 572

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDM--VQSGY 473
           ++D+ A++G   +A +  ++MP E + ++W +L+SAC  + +A     + E +  +  G 
Sbjct: 573 MVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGN 632

Query: 474 QPDSVSLLSVLSACS 488
                +L +V SAC 
Sbjct: 633 SGAYSALSNVYSACG 647



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 231/533 (43%), Gaps = 88/533 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N ++S     G +  A  LF +M DRT VSW  +I GY+Q     +A   F
Sbjct: 223 MPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFF 282

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV----- 115
             M +     PD  T  ++LS C+     +   QVHA I++     I  + N+L+     
Sbjct: 283 SRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAK 342

Query: 116 ----------------------------DSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                                       + Y K+  +  AR +F  M  +D V++ A+I 
Sbjct: 343 SGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIV 402

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G N+EA++LF  M   G +P+ +T AA LS    LA +  G+Q+H   +++   +
Sbjct: 403 GYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQ 462

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +  V+N+++ +Y++   +  AR++F  +    + V++  MI   A +   ++++ LF E+
Sbjct: 463 SSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEM 522

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGR 325
                   +  F  +LS   +   +  G++   Q      I  E+     +VD+ A+ G 
Sbjct: 523 LRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGL 582

Query: 326 FEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
           F EA+E    +      + W +++SA                 CR + +AD A       
Sbjct: 583 FSEAQEFIQQMPVEPDAIAWGSLLSA-----------------CRVHKNADLAEL----- 620

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
           A+ +L S+  G              N  + SAL ++Y+  G   DA + +K   ++++  
Sbjct: 621 AAEKLLSIDPG--------------NSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKK 666

Query: 443 ---VSWNAL-----------ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
               SW  +           +    ++   +   K ++D+ ++G+ PD  S+L
Sbjct: 667 ETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVL 719



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 136/319 (42%), Gaps = 79/319 (24%)

Query: 294 GRQIHTQTI--------------------------------------VTTAISEVKVANS 315
           GR IH + +                                      +  A   V   NS
Sbjct: 42  GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ +YAK GR  +A+ +FA +     V WT M+    + G   EA+ +F++M    +S  
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q T  ++L + A   +  +G+++HSFV++ G  S V   +++L+MY K G  + A   F+
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDM----------VQSGYQ----------- 474
            MPER++ SWNA++S  A  G     L  FE+M          V +GY            
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281

Query: 475 -----------PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SM 519
                      PD  ++ SVLSAC++ G++  G Q        Y LR +  +      ++
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQ-----VHAYILRSRMPYIGQVTNAL 336

Query: 520 VDILCRSGCFDEAEKLMAQ 538
           + +  +SG  + A  +M Q
Sbjct: 337 ISMYAKSGSVENARGVMQQ 355


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/646 (39%), Positives = 387/646 (59%), Gaps = 11/646 (1%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+ +Y K   + +A  +F ++PQ D VSFN LI  +A  G    A+ LF EM+ +G  
Sbjct: 78  NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
              FTF+  ++A      + L RQ+H+    + F   V V N+LL  YSK+  + EA  +
Sbjct: 138 MDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMV 195

Query: 232 FGEMPE--VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           F  M E   D VS+N MI  Y  +++  ++L L+R++    F+   F  +++L+  +   
Sbjct: 196 FNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVE 255

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMI 348
           DL  G Q H + I T       V + L+DMYAKCG    E++++F  +     V W  MI
Sbjct: 256 DLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMI 315

Query: 349 SAYVQKGNLE-EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           S Y Q   L  EAL  F +M RA    D  +F   + A + L+S S GKQ H+  ++S  
Sbjct: 316 SGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEI 375

Query: 408 MSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
            SN  S  +AL+ MY+K G+L+DA + F+ MP+ N V+ N++I+  AQ+G    +L  FE
Sbjct: 376 PSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFE 435

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M+ +   P S++L+S+LSAC+H G +EEG +YFN M   + + P+ EHY+ M+D+L R+
Sbjct: 436 QMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRA 495

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G   EAE+L+  MPF P    W++++ +CR + N+E A+KAA+Q  ++E   +A PY+ +
Sbjct: 496 GKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP-TNAVPYIML 554

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           +++Y+ A +WE  ++++K MR+RG+RK    SW+EL  +VHVF A D  HP+  EI   +
Sbjct: 555 ASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYL 614

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVES---LKYHSERLAIAFALINTPEGSPILVM 703
           + +  +MK+ GY PD   A   +DE  + E    L +HSE+LA+AF L+ T  G P+LV+
Sbjct: 615 DEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVV 674

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C DCH AIK +S I  R+ITVRD+ RFH F+DG CSC D+W
Sbjct: 675 KNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 244/479 (50%), Gaps = 22/479 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N LI+ Y K   +  A  LF+ +     VS+  LI  Y+ +     A  LF +MR
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G   D  TF+ +++ C   +    + Q+H+     G++S + + NSL+  Y K   L
Sbjct: 133 -EMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 125 DLARRVFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           + A  VF  M +  +D VS+N++I  + +     +A+ L+ +M H GF+   FT A+ L+
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC-VVEARKLFGEMPEVDGV 241
               + D++ G Q HA  +KT F +N  V + L+D+Y+K    + E+RK+F E+   D V
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309

Query: 242 SYNVMITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            +N MI+ Y+ N++   E+L+ FR++Q   +      F   +S  +N      G+Q H  
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            + +   S ++ V N+LV MY+KCG  ++A+++F  +   +TV   ++I+ Y Q G   E
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS------ 413
           +LNLF +M  A+I+    T  SIL A A    +  GK+  +       M ++F       
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFN------MMKDIFGIEPEAE 483

Query: 414 -GSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
             S ++D+  ++G L +A +    MP      +W AL+ AC + G+ +   K+    +Q
Sbjct: 484 HYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQ 542



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 11/351 (3%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           NVF  NAL+  Y+K   +  A  LF ++P+ D VS+N +I  YA       +L LF E++
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                   F FS +++   N + L   RQ+H+    +   S V V NSL+  Y+K G  E
Sbjct: 133 EMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 328 EAKEIFANLSH--ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
           EA+ +F  +       V W +MI AY Q     +AL L+ +M       D  T AS+L  
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS-LKDAIQTFKEMPERNIVS 444
            + +  LS G Q H+  I++GF  N   GS L+DMYAK G+ + ++ + F+E+   ++V 
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 445 WNALISACAQNGDAQA-TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           WN +IS  +QN +     L+ F  M ++GY PD  S +  +SACS+     +G Q F+++
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ-FHAL 369

Query: 504 TQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             K ++ P  +     ++V +  + G   +A KL  +MP + + +  +S+I
Sbjct: 370 AMKSEI-PSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSII 418



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 161/343 (46%), Gaps = 42/343 (12%)

Query: 269 TRFDRSQFPFSTLL-SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
           T+F  +   F  +L S +ANK DL  G+ +HT  + +   S   ++N  + +Y+KC    
Sbjct: 2   TQFSWTLQSFRQILKSCIANK-DLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLT 60

Query: 328 EAKEIF--------------------ANLSHIS-----------TVPWTAMISAYVQKGN 356
            A   F                     +L H++            V +  +I+AY  +G+
Sbjct: 61  TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
              AL+LF EM    +  D  TF+ ++ A      + L +QLHS    SGF S V   ++
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNS 178

Query: 417 LLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           LL  Y+K+G L++A   F  M E  R+ VSWN++I A  Q+      L  + DMV  G++
Sbjct: 179 LLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFE 238

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC-FDEAE 533
            D  +L SVL+  S    +  GLQ F++   K      +   + ++D+  + G    E+ 
Sbjct: 239 IDMFTLASVLTTFSCVEDLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESR 297

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           K+  ++    D ++W+++I+     +N E + +A +   +M++
Sbjct: 298 KVFEEIC-GSDLVVWNTMISG--YSQNKELSVEALECFRQMQR 337



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 32/232 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+      N L++ Y K GNL  AR+LF  M     V+   +I GY+Q     E+  LF
Sbjct: 375 IPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLF 434

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANE---LIQVHADIIKFGYNSILIICNSLVDS 117
             M       P  +T  ++LS C+      E      +  DI  FG        + ++D 
Sbjct: 435 EQMLA-ASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDI--FGIEPEAEHYSCMIDL 491

Query: 118 YCKIRCLDLARRVFKEMP-QKDSVSFNALITGFAKEG---LNEEAIKLFVEMQHLGFKPS 173
             +   L  A R+   MP    S ++ AL+    K G   L E+A   F++++     P 
Sbjct: 492 LGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPY 551

Query: 174 DFTFAAALSA-----------------GV----GLADIALGRQVHAFVVKTN 204
               A+  SA                 G+    G + I L ++VH FV + N
Sbjct: 552 -IMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDN 602


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 425/747 (56%), Gaps = 3/747 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN +    LI  Y + G++  A+++F  +  +   +WT +IG Y Q+  +  A  +F  M
Sbjct: 38  QNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM 97

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +    P  VT+  +L+ C+  ++  + +++H  I++ G+   + +  +L++ Y K   
Sbjct: 98  QEED-VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 156

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A   FK +  +D VS+ A+I    +      A  L+  MQ  G  P+  T     +A
Sbjct: 157 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 216

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 ++ G+ +++ V       +V V N+ ++++     + +AR+LF +M + D V++
Sbjct: 217 YGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTW 276

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N++IT Y  NE + E+++LF  LQ      +   F  +L+V  +   L  G+ IH     
Sbjct: 277 NIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +V VA +L+ +Y +C    +A +IF ++     + WT M  AY Q G  +EAL L
Sbjct: 337 AGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 396

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM         AT  ++L   A LA+L  G+Q+HS +I +GF   +   +AL++MY K
Sbjct: 397 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGK 456

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G + +A   F++M +R+I+ WN+++ A AQ+G    TL+ F  M   G + D+VS +SV
Sbjct: 457 CGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSV 516

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP-FE 542
           LSA SH G + +G QYF +M Q + + P  E Y  +VD+L R+G   EA  ++ ++    
Sbjct: 517 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL 576

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+W +++ +CR H   + AK AA+Q+ + +     A YV +SN+YA AG W+ V+++
Sbjct: 577 PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGA-YVVLSNVYAAAGDWDGVNRM 635

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR RGV+K    S +E+ ++VH F   D  HP+ + I  +++ L  EM+  GY PDT
Sbjct: 636 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 695

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD ++E K + L YHSERLAIAF L++TP G+P+ V+KNLR C+DCH A K ISK+
Sbjct: 696 KMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKL 755

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
            GREI VRD+ RFH+FKDG CSC+D+W
Sbjct: 756 RGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 259/524 (49%), Gaps = 2/524 (0%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD   F  LL  CS     +   +VH  +   G+    ++C  L+  Y +   +  A++V
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F+ + +KD  ++  +I  + ++G  + A+ +F +MQ     P+  T+ A L+A      +
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G ++H  +++  F  +VFV  AL+++Y+K   V  A   F  +   D VS+  MI   
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             ++Q+  +  L+R +Q      ++    T+ +   +   L  G+ I++        S+V
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDV 242

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           +V NS ++M+   G   +A+ +F ++     V W  +I+ YVQ  N  EA+ LF  + + 
Sbjct: 243 RVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD 302

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I A+  TF  +L     L SL+ GK +H  V  +G+  +V   +AL+ +Y +  +   A
Sbjct: 303 GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQA 362

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F +M  +++++W  +  A AQNG  +  L+ F++M   G +P S +L++VL  C+H 
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 422

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             +++G Q  + + +    R +     +++++  + G   EA  +  +M  + D ++W+S
Sbjct: 423 AALQKGRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNS 480

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++ +   H   +   +  +Q+    +  DA  +V++ +  + +G
Sbjct: 481 MLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSG 524



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 10/447 (2%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
           FKP    F A L       ++  GR+VH  V    F +N  V   L+ +Y++   V EA+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           ++F  +   D  ++  MI  Y     Y  +L +F ++Q      ++  +  +L+  A+  
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L+ G +IH Q +      +V V  +L++MY KCG    A + F  L H   V WTAMI+
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           A VQ      A  L+  M    +  ++ T  ++  A  +   LS GK ++S V      S
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +V   ++ ++M+  +G L DA + F++M +R++V+WN +I+   QN +    ++ F  + 
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           Q G + + ++ + +L+  +    + +G +  + + ++           +++ +  R    
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVA 585
            +A K+   M    D I W+ +   C  +    F K+A  QLF+  +L    P     VA
Sbjct: 360 GQAWKIFVDMG-SKDVITWTVM---CVAYAQNGFRKEAL-QLFQEMQLEGRRPTSATLVA 414

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVR 612
           + +  A     +   Q+   + E G R
Sbjct: 415 VLDTCAHLAALQKGRQIHSHIIENGFR 441



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 98/181 (54%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ V    L+S Y +      A ++F  M  +  ++WT++   Y+Q    +EA +LF +
Sbjct: 340 DRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQE 399

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  P   T   +L  C+      +  Q+H+ II+ G+   +++  +L++ Y K  
Sbjct: 400 MQLE-GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCG 458

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR VF++M ++D + +N+++  +A+ G  +E ++LF +MQ  G K    +F + LS
Sbjct: 459 KMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLS 518

Query: 183 A 183
           A
Sbjct: 519 A 519


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/754 (35%), Positives = 437/754 (57%), Gaps = 19/754 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           +++ V  N L++ Y + G +A+AR +F+ M   R  VSWT +    ++    R +  L  
Sbjct: 81  DRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIG 140

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDT-ANELIQVHADIIKFG-YNSILIICNSLVDSYC 119
           +M  + G  P+  T       C   +        V   + K G + + + + ++L+D   
Sbjct: 141 EM-LESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLA 199

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           +   L  AR+VF  + +K  V +  LI+ + +    EEA++LF++    GF+P  +T ++
Sbjct: 200 RNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSS 259

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD---CVVEARKLFGEMP 236
            +SA   L  + LG Q+H+  ++     +  V+  L+D+Y+K +    +  A K+F  MP
Sbjct: 260 MISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMP 319

Query: 237 EVDGVSYNVMITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           + D +S+  +I+ Y  +  Q  + + LF E+       +   +S++L   A+  D   GR
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGR 379

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   I +   S   V N+LV MYA+ G  EEA+ +F  L   S +P        + +G
Sbjct: 380 QVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPC-------ITEG 432

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
                  L   + R ++    +TFAS++ A+A +  L+ G+QLH+  +++GF S+ F  +
Sbjct: 433 ---RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSN 489

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L+ MY++ G L+DA ++F E+ +RN++SW ++IS  A++G A+  L  F DM+ +G +P
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ ++VLSACSH GL+ EG +YF SM + + L P+ EHYA MVD+L RSG   EA + 
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEF 609

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           + +MP + D ++W +++ +CR H N+E  +  A  + ++E  RD APYV +SN+YA AG 
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEP-RDPAPYVLLSNLYADAGL 668

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ V++++ AMR+  + K T  SW+E+++  H F A D  HP+  +I  K++ L++++K 
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKG 728

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY PDTS  LHD  +E+K + L  HSE++A+AF LI T    PI + KNLR C DCH+A
Sbjct: 729 MGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSA 788

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IK +SK T REI +RDS+RFH  KDG CSC ++W
Sbjct: 789 IKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 190/383 (49%), Gaps = 25/383 (6%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARK 230
           PSD +   A +A  G  D+ LGR +H  +++ + ++ +  VAN+LL LYS+   V  AR 
Sbjct: 48  PSDVSALLAAAARAG--DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARN 105

Query: 231 LFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-- 287
           +F  M  + D VS+  M +C A N   + SL L  E+     +    P +  L   A+  
Sbjct: 106 VFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEM----LESGLLPNAYTLCAAAHAC 161

Query: 288 -------KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
                   +   +   +H   +  T   +V V ++L+DM A+ G    A+++F  L   +
Sbjct: 162 FPHELYCLVGGVVLGLVHKMGLWGT---DVAVGSALIDMLARNGDLASARKVFDGLIEKT 218

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT +IS YVQ    EEA+ LF++        D+ T +S++ A  EL S+ LG QLHS
Sbjct: 219 VVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHS 278

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSG---SLKDAIQTFKEMPERNIVSWNALISACAQNG- 456
             +R G  S+      L+DMYAKS    ++  A + F+ MP+ +++SW ALIS   Q+G 
Sbjct: 279 LALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGV 338

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
                +  F +M+    +P+ ++  S+L +C+     + G Q    + +  +        
Sbjct: 339 QENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGN 398

Query: 517 ASMVDILCRSGCFDEAEKLMAQM 539
           A +V +   SGC +EA ++  Q+
Sbjct: 399 A-LVSMYAESGCMEEARRVFNQL 420



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 131/336 (38%), Gaps = 60/336 (17%)

Query: 392 LSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALI 449
           L LG+ LH  ++R   +  +    ++LL +Y++ G++  A   F  M   R+IVSW A+ 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           S  A+NG  + +L    +M++SG  P++ +L +   AC    L          +  K  L
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 510 RPKKEHYAS-MVDILCRSG-------------------------------CFDEAEKLMA 537
                   S ++D+L R+G                               C +EA +L  
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243

Query: 538 QM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
                 FEPD    SS+I++C    ++    +      +M    DA     + ++YA + 
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
             +++    K   ER + K    SW  L S           + Q+     K+  L  EM 
Sbjct: 304 IGQAMDYANKVF-ER-MPKNDVISWTALISG----------YVQSGVQENKVMALFGEML 351

Query: 655 KEGYKPD--------TSCAL---HDEDEEIKVESLK 679
            E  KP+         SCA    HD   ++    +K
Sbjct: 352 NESIKPNHITYSSILKSCASISDHDSGRQVHAHVIK 387


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/740 (35%), Positives = 422/740 (57%), Gaps = 11/740 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           ++    +  AR +F+ +   + V W ++I  Y+    F+++  L++ M    G  P   T
Sbjct: 51  HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHM-LQLGVTPTNFT 109

Query: 76  FATLLSGCS--EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           F  LL  CS  +      LI  HA I+  G +  L +  +L+  Y K   L  A+ +F  
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTHAHIL--GLSMDLYVSTALLHMYAKCGHLYQAQTLFNS 167

Query: 134 MPQKDS--VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-I 190
           +  +D   V++NA+I  F+   L+ + I    +MQ  G  P+  T  + L   +G A+ +
Sbjct: 168 ISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPT-IGQANAL 226

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+ +HA+ ++  F +NV +  ALLD+Y+K   +  ARK+F  + + + V ++ MI  Y
Sbjct: 227 HQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGY 286

Query: 251 AWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
             ++   ++L L+ + L     + +    +T+L   A   DL+ G+++H   I +    +
Sbjct: 287 VLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLD 346

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V NSL+ MYAKCG  + A      +    TV ++A+IS  VQ G  E+AL +F +M  
Sbjct: 347 TTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + I+    T  ++L A + LA+L  G   H + +  GF ++    +A++DMY+K G +  
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           + + F  M  R+I+SWN +I     +G     L  F+++   G +PD V+L++VLSACSH
Sbjct: 467 SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH 526

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+ EG  +F+SM+Q + ++P+  HY  MVD+L R+G  DEA   + +MPF P+  +W 
Sbjct: 527 SGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWG 586

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR HKN+E  ++ + ++ ++        +V MSNIY+  G+W+  + ++   R  
Sbjct: 587 ALLAACRTHKNIEMGEQVSKKI-QLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHH 645

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G +K    SWVE+   +HVF    + HPQ+  I +K++ L+ +MKK GY+ D+S  LHD 
Sbjct: 646 GYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDV 705

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K + L YHSE++AIAF ++NT   S ILV KNLR C DCH+AIK I+ +T REITV
Sbjct: 706 EEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITV 765

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD+SRFHHFKDG C+C+DFW
Sbjct: 766 RDASRFHHFKDGICNCQDFW 785


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/796 (33%), Positives = 447/796 (56%), Gaps = 77/796 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILI-------------GGYSQKN 51
           N ++ N++++GY K G+L+ A ELF+ M  R   SW  L+             G    + 
Sbjct: 86  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRE 145

Query: 52  QFREAFKLFVDMRTDGGSDPDYVT-FATLLSGCSEPDTANELI-QVHADIIKFGYNSILI 109
              +   LF   + D   DPD  T    +   C   D A+ L  Q+    I         
Sbjct: 146 LAPQLLGLF--WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI--------- 194

Query: 110 IC-NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            C NS++  Y K+  +D A   F++M ++D VS+N +I   ++ G   EA+ L VEM   
Sbjct: 195 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 254

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G +    T+ ++L+A   L  +  G+Q+HA V+++    + +VA+AL++LY+K     EA
Sbjct: 255 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 314

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           +++F  + + + VS+ V+I      E + +S++LF +++       QF  +TL+S   N+
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 374

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
           +DL +GRQ+H+  + +     + V+NSL+ +YAKCG  + A+ +F+++S    V WT+MI
Sbjct: 375 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 434

Query: 349 SAYVQKGNLEEALNLFIEMCRAN--------------------------------ISADQ 376
           +AY Q GN+ +A   F  M   N                                ++ D 
Sbjct: 435 TAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 494

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T+ ++ R  A++ +  LG Q+    +++G + NV   +A + MY+K G + +A + F  
Sbjct: 495 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDL 554

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  +++VSWNA+I+  +Q+G  +   K+F+DM+  G +PD +S ++VLS CSH GL++EG
Sbjct: 555 LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG 614

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
             YF+ MT+ + + P  EH++ MVD+L R+G   EA+ L+ +MP +P   +W +++++C+
Sbjct: 615 KLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 674

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IH N E A+ AA  +F+++   D+  Y+ ++ IY+ AG+ +  +QV+K MR++G++K   
Sbjct: 675 IHGNDELAELAAKHVFELDS-PDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 733

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
           YSW+E+++KVHVF A+D  HPQ   IR K++ LM+++   GY              ++ E
Sbjct: 734 YSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY--------------VRTE 779

Query: 677 SLK---YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           S +   +HSE+LA+AF +++ P   PI +MKNLR C DCH  IKLIS +T RE  +RD  
Sbjct: 780 SPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGV 839

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK G CSC D+W
Sbjct: 840 RFHHFKSGSCSCGDYW 855



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 268/586 (45%), Gaps = 53/586 (9%)

Query: 71  PDYVT--FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           P  VT   A  L  C           +H  ++  G  S + + N+L+ +Y     L  AR
Sbjct: 16  PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75

Query: 129 RVFK-EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA-AALSAGVG 186
           R+ + ++ + + ++ N ++ G+AK+G   +A +LF  M        +   +  +  AG  
Sbjct: 76  RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135

Query: 187 LADIALGRQVHA------------------------FVVKTNFVE------------NVF 210
           ++  ALG +  A                          V+  +V+             +F
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
             N++L  Y+K   +  A + F +M E D VS+N+MI   + + + +E+L L  E+    
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                  +++ L+  A    L  G+Q+H + I +    +  VA++L+++YAKCG F+EAK
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F +L   ++V WT +I   +Q     +++ LF +M    ++ DQ   A+++       
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 375

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L LG+QLHS  ++SG    +   ++L+ +YAK G L++A   F  M ER+IVSW ++I+
Sbjct: 376 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 435

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           A +Q G+     + F+ M       ++++  ++L A    G  E+GL+ +++M  +  + 
Sbjct: 436 AYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 491

Query: 511 PKKEHYASMVDILCRSGCFD-EAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKK 566
           P    Y ++       GC D  A KL  Q+     +   I+  SV N+     +      
Sbjct: 492 PDWVTYVTLF-----RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 546

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            A +LF +   +D   + AM   Y+  G  +  ++    M  +G +
Sbjct: 547 EAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK 592



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 182/399 (45%), Gaps = 45/399 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +    + LI  Y K G+   A+ +FNS+ DR +VSWT+LIGG  Q   F ++ +LF
Sbjct: 290 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 349

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR +  +  D    ATL+SGC          Q+H+  +K G+N  +++ NSL+  Y K
Sbjct: 350 NQMRAELMA-IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK 408

Query: 121 IRCLDL---------------------------------ARRVFKEMPQKDSVSFNALIT 147
             C DL                                 AR  F  M  ++++++NA++ 
Sbjct: 409 --CGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 466

Query: 148 GFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIA---LGRQVHAFVVKT 203
            + + G  E+ +K++  M       P   T+        G ADI    LG Q+    VK 
Sbjct: 467 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR---GCADIGANKLGDQIIGHTVKA 523

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             + NV VANA + +YSK   + EA+KLF  +   D VS+N MIT Y+ +   K++ K F
Sbjct: 524 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTF 583

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAK 322
            ++           +  +LS  ++   +Q G+           IS  ++  + +VD+  +
Sbjct: 584 DDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGR 643

Query: 323 CGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            G   EAK++   +    T   W A++SA    GN E A
Sbjct: 644 AGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 682



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 16/183 (8%)

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           CR    A     A  LR+     +L+  + LH  ++  G  S VF  + LL  Y   G+L
Sbjct: 12  CRLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGAL 71

Query: 428 KDAIQTFK-EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS- 485
            DA +  + ++ E N+++ N +++  A+ G    +L   E++     + D  S  +++S 
Sbjct: 72  SDARRLLRADIKEPNVITHNIMMNGYAKQG----SLSDAEELFDRMPRRDVASWNTLMSD 127

Query: 486 ---------ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
                    +C   G  E   Q    +  K+      +   ++VD+  R G  D A +L 
Sbjct: 128 TSRPAGSWMSCGALGCRELAPQLLG-LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 186

Query: 537 AQM 539
           +Q+
Sbjct: 187 SQI 189


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/746 (35%), Positives = 415/746 (55%), Gaps = 8/746 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G+    + +F+ M   + + WT +I G SQ  Q+ E   +F  M  +G  
Sbjct: 198 NALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEG-V 256

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             + VT+ +++  C   D   E   + A I++  + S  ++  SL+  Y +   LD A+ 
Sbjct: 257 KANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKG 316

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           + + M Q+D V++NA++T  A+ G N EAI L   M   GF  +  T+ + L A   L  
Sbjct: 317 LLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEA 376

Query: 190 IALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           ++ GR++HA V+    ++  V V N+++ +Y K      A  +F  MP  D VS+N +I 
Sbjct: 377 LSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVIN 436

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI- 307
               N +++++L+LF  ++      ++F   +LL       DL++ RQIH +        
Sbjct: 437 ASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGG 496

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK--GNLEEALNLFI 365
           +   V NS+V+MYA+CG   +AK+ F +L     V W+ +++AY Q   G    A   F 
Sbjct: 497 NSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQ 556

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM-SNVFSGSALLDMYAKS 424
           EM    I   + TF S L A A +A+L  G+ +H     SGF+ +++  G+ +++MY K 
Sbjct: 557 EMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKC 616

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS  DA   F +MPE+ ++SWN+LI A A NG A   L S ++M+  G+ PDS + +S+L
Sbjct: 617 GSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSIL 676

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP-FEP 543
              SH GL+E G+++F S  Q + L P       +VD+L R G  D AE+L+   P  + 
Sbjct: 677 YGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQA 736

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D I W +++ +C+ + + +   + A+++F++E  + +  +V ++N+YA  G+W   S+++
Sbjct: 737 DTIAWMTLLAACKSYGDPQRGIRCAERVFELEP-QHSGSFVVLANLYASVGRWSDASRIR 795

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M    V+K    SW+EL   VH F + +  HP+  EI   +E L   M++ GY PDT+
Sbjct: 796 KMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTT 855

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             +HD +E  K E L  HSERLAI F L++T  G  I V+KNLR C+DCHAA K+IS + 
Sbjct: 856 NVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVV 915

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GREI VRDSSRFHHFK G CSC DFW
Sbjct: 916 GREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 265/538 (49%), Gaps = 3/538 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K   +  A  +F+ +  +   SWT+++  YSQ   +REA +LF  M+ +G + PD V 
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEG-TRPDKVV 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F   L  C+     +   Q+H+ ++  G  S +II NSLV+ Y K + +  A +VF  M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D VS+ A++  +A+ G   +A++    M   G KP+  TF   +     L  + LGR+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  ++      +  + NAL+ +Y       + + +F  M +   + +  MI   + N Q
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           Y+E L +FR++       ++  + +++ V  N   ++ G  I  + + +   S   +A S
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ +Y +CG  + AK +  ++     V W AM++A  Q G+  EA++L   M      A+
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTF 434
           + T+ S+L A A L +LS G+++H+ V+  G +   V  G++++ MY K G  + A+  F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + MP ++ VSWNA+I+A   N   Q  L+ F  M   G + +  +LLS+L AC     ++
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
              Q                   S+V++  R G   +A+K    +  E   + WS ++
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-EKGLVAWSIIL 537



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 278/552 (50%), Gaps = 6/552 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N + +N L++ Y K  ++  A ++F+ M+ R  VSWT ++  Y+Q   + +A +    M 
Sbjct: 92  NIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMD 151

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  P+ VTF T++  C++    +   ++H  II  G     I+ N+LV  Y      
Sbjct: 152 AE-GVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSF 210

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D  + VF  M Q   + +  +I G ++ G  EE + +F +M   G K ++ T+ + +   
Sbjct: 211 DDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVC 270

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  +  G  + A ++++ F  +  +A +L+ LY +   +  A+ L   M + D V++N
Sbjct: 271 RNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWN 330

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+T  A N    E++ L R +    F  ++  + ++L   AN   L  GR+IH + ++ 
Sbjct: 331 AMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLC 390

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
             +  EV V NS++ MY KCG+ E A  +F  +     V W A+I+A V     ++AL L
Sbjct: 391 GLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALEL 450

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYA 422
           F  M    + +++ T  S+L A   L  L L +Q+H+     GF  N  + G+++++MYA
Sbjct: 451 FHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYA 510

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQ--NGDAQATLKSFEDMVQSGYQPDSVSL 480
           + GSL DA + F  + E+ +V+W+ +++A AQ  +G  +   K F++M   G +P  V+ 
Sbjct: 511 RCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTF 570

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +S L AC+    +E G            +        +++++  + G   +A+ +  QMP
Sbjct: 571 VSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630

Query: 541 FEPDEIMWSSVI 552
            E   I W+S+I
Sbjct: 631 -EKCLISWNSLI 641



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 221/428 (51%), Gaps = 1/428 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  VF  +  K+  S+  ++  +++ G   EA++LF  MQ  G +P    F  AL A   
Sbjct: 11  ALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAA 70

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             ++  GRQ+H+ VV +    N+ ++N+L+++Y K   V  A K+F  M   D VS+  M
Sbjct: 71  SGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAM 130

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N  + ++L+    +       +Q  F T++ V A    L +GR+IH + I    
Sbjct: 131 LAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGL 190

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +  + N+LV MY  CG F++ K +F+ +   S + WT MI+   Q G  EE L +F +
Sbjct: 191 EPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRK 250

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    + A++ T+ S++     L ++  G+ + + ++ S F S+    ++L+ +Y + G 
Sbjct: 251 MDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGI 310

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  A    + M +R++V+WNA+++ACAQNGD    +     M   G+  + V+ LSVL A
Sbjct: 311 LDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEA 370

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C++   + +G +    +     L+ +     S++ +  + G  + A  +   MP   D++
Sbjct: 371 CANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP-RKDDV 429

Query: 547 MWSSVINS 554
            W++VIN+
Sbjct: 430 SWNAVINA 437



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 169/338 (50%), Gaps = 2/338 (0%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   V +A  +F  +   +  S+ +M+  Y+ N  Y+E+L+LF  +Q+      +  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F   L   A   +L  GRQIH+  + +   S + ++NSLV+MY KC     A+++F  + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V WTAM++ Y Q G   +AL     M    +  +Q TF +I+   A+L  L LG++
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H  +I  G   +   G+AL+ MY   GS  D    F  M + +++ W  +I+ C+QNG 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L  F  M   G + + V+ +S++  C +   ++EG +  ++   +           
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLAT 299

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           S++ +  + G  D A+ L+  M ++ D + W++++ +C
Sbjct: 300 SLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTAC 336



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 53/244 (21%)

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY K   + DA+  F  +  +N+ SW  +++A +QNG  +  L+ F  M   G +PD V 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +  L AC+  G ++ G Q  +S+                      SG            
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVG--------------------SG------------ 88

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
               + I+ +S++N     +++  A+K  D +     LRD   + AM  +YA  G W   
Sbjct: 89  -LTSNIIISNSLVNMYGKCQDVPCAEKVFDGML----LRDVVSWTAMLAVYAQNGCWSQA 143

Query: 600 SQVKKAMRERGVR--KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
            +    M   GV+  +VT  + V++ +K+ +     ++H                +  EG
Sbjct: 144 LECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIH--------------HRIINEG 189

Query: 658 YKPD 661
            +PD
Sbjct: 190 LEPD 193


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/782 (34%), Positives = 424/782 (54%), Gaps = 45/782 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +++GY  S  +  A  LF  M  R  V+WT++I GY +  Q  + + +F
Sbjct: 152 MPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIF 211

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G S PD   FA++LS  +       L  +   ++K G+ S ++I  S+++ Y +
Sbjct: 212 RMMHHEGAS-PDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270

Query: 121 -IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               LD+A + F  M +++  +++ +I   +  G  + AI ++      G  P   +  +
Sbjct: 271 DASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDPVK-SIPS 323

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMPEV 238
             +   GLA    GR   A ++     + + V+ NA++  Y ++  V EA++LF  MP  
Sbjct: 324 QTALLTGLA--RCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + +S+  MI  YA N + +E+L L + L       S    ++     ++   L+ GRQ+H
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 299 TQTIVTTAISEVKVANSLVDMYAKC-------------------------------GRFE 327
           +  +         V N+L+ MY KC                                  E
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ IF N+     V WT +ISAY Q    +EA+  F  M   +   +      +L    
Sbjct: 502 DARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            L S  LG+Q+H+  I+ G  S +   +AL+ MY K G   D+ + F  M ER+I +WN 
Sbjct: 562 GLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSMEERDIFTWNT 620

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
            I+ CAQ+G  +  +K +E M   G  P+ V+ + +L+ACSH GL++EG Q+F SM++ Y
Sbjct: 621 FITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDY 680

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            L P  EHYA MVD+L R+G    AEK +  MP EPD ++WS+++ +C+IHKN E  ++A
Sbjct: 681 GLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRA 740

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
           A++LF  E   +A  YV +SNIY+  G W  V++++K M++RGV K    SW+++++KVH
Sbjct: 741 AEKLFTTEP-SNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVH 799

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F   D+ H +  EI   +++L   ++  GY PDT   LHD DEE K  SL YHSE+LA+
Sbjct: 800 SFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 859

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           A+ L+ TP+G PI +MKNLR C DCH  IK +S +T R+I +RD +RFHHF++G CSC D
Sbjct: 860 AYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGD 919

Query: 748 FW 749
           FW
Sbjct: 920 FW 921



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 256/511 (50%), Gaps = 26/511 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ ++ N +IS Y  SG L  AR LF+++      + TIL+ GY++  +  +A ++F
Sbjct: 59  MPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVF 118

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                DG  + + V +  ++S C      N  I +   +     +  +   NS+V  YC 
Sbjct: 119 -----DGMPERNTVAWNAMVS-CY---VQNGDITMARRLFDAMPSRDVTSWNSMVTGYCH 169

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +  A  +FK+MPQ++ V++  +I+G+ +   + +   +F  M H G  P    FA+ 
Sbjct: 170 SRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASV 229

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVD 239
           LSA  GL D+ +   +   V+KT F  +V +  ++L++Y++    ++ A K F  M E +
Sbjct: 230 LSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERN 289

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST-LLSVVANKLDLQIGRQIH 298
             +++ MI   +   +   ++ ++      R      P  T LL+ +A     + GR   
Sbjct: 290 EYTWSTMIAALSHGGRIDAAIAVY-----GRDPVKSIPSQTALLTGLA-----RCGRITE 339

Query: 299 TQTIVTTAISEVKVA-NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            + +       + V+ N+++  Y + G  +EAKE+F  +   +T+ W  MI+ Y Q G  
Sbjct: 340 ARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRS 399

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           EEAL+L   + R  +    ++  S   A + + +L  G+Q+HS  +++G   N +  +AL
Sbjct: 400 EEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNAL 459

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY K  +++   Q F  M  ++ VSWN+ I+A  QN   +     F++M+      D 
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR----DV 515

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           VS  +++SA +     +E +++F +M  +++
Sbjct: 516 VSWTTIISAYAQAERGDEAVEFFKTMLHEHE 546



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/513 (23%), Positives = 221/513 (43%), Gaps = 56/513 (10%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP +D +++N++I+ +   G+ E+A  LF  +        +   A  L +G  
Sbjct: 52  AREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAI-----SGGNVRTATILLSGYA 106

Query: 187 LADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
                LGR + A  V     E N    NA++  Y ++  +  AR+LF  MP  D  S+N 
Sbjct: 107 ----RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNS 162

Query: 246 MITCY--------AWN-----------------------EQYKESLKLFRELQFTRFDRS 274
           M+T Y        AWN                       EQ+ +   +FR +        
Sbjct: 163 MVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPD 222

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK-CGRFEEAKEIF 333
           Q  F+++LS V    DL +   +    + T   S+V +  S++++Y +     + A + F
Sbjct: 223 QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFF 282

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   +   W+ MI+A    G ++ A+ ++      +I +  A    + R      +  
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARI 342

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           L +Q+   +        V S +A++  Y ++G + +A + F  MP RN +SW  +I+  A
Sbjct: 343 LFEQIPDPI--------VVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           QNG ++  L   + + ++G  P   SL S   ACSH G +E G Q  +S+  K   +   
Sbjct: 395 QNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQ-VHSLAVKAGCQFNS 453

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
               +++ +  +    +   ++  +M  + D + W+S I +   +  LE A+   D +  
Sbjct: 454 YVCNALISMYGKCRNMEYVRQVFNRMRVK-DTVSWNSFIAALVQNNMLEDARHIFDNMLS 512

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
               RD   +  + + YA A + +   +  K M
Sbjct: 513 ----RDVVSWTTIISAYAQAERGDEAVEFFKTM 541



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 43/186 (23%)

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
           A+ GR  EA+E+F  + H   + W +MISAY   G LE+A  LF                
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF---------------- 87

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
                     ++S G              NV + + LL  YA+ G + DA + F  MPER
Sbjct: 88  ---------DAISGG--------------NVRTATILLSGYARLGRVLDARRVFDGMPER 124

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           N V+WNA++S   QNGD     + F+ M       D  S  S+++   H   + +    F
Sbjct: 125 NTVAWNAMVSCYVQNGDITMARRLFDAMPSR----DVTSWNSMVTGYCHSRQMVDAWNLF 180

Query: 501 NSMTQK 506
             M Q+
Sbjct: 181 KQMPQR 186


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/753 (36%), Positives = 425/753 (56%), Gaps = 19/753 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +V  N+L+  Y   G +A+A  LF  M +R  VSW   I   +Q      A +LF  M+
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQ 220

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G   P  +T    LS C++   A     +H+ + + G    L++  +L  +Y ++  L
Sbjct: 221 LEG-VRPARITLVITLSVCAKIRQAR---AIHSIVRESGLEQTLVVSTALASAYARLGHL 276

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A+ VF    ++D VS+NA++  +A+ G   EA  LF  M H G  PS  T    ++A 
Sbjct: 277 DQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNAS 333

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G + +  GR +HA  ++     ++ + NALLD+Y++     EAR LF  +P  + VS+N
Sbjct: 334 TGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWN 392

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD----LQIGRQIHTQ 300
            MI   +   Q K +L+LF+ +Q       +  +  LL  VA+  +    +  GR++H++
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF---ANLSHISTVPWTAMISAYVQKGNL 357
            +     SE  +  ++V MYA CG  +EA   F   A       V W A+IS+  Q G+ 
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           + AL  F  M    ++ +Q T  ++L A A  A+L+ G  +H  +  SG  SNVF  +AL
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATAL 572

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
             MY + GSL+ A + F+++  ER++V +NA+I+A +QNG A   LK F  M Q G +PD
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             S +SVLSACSH GL +EG + F SM Q Y + P ++HYA  VD+L R+G   +AE+L+
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELI 692

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             M  +P  ++W +++ +CR +++++  + A   + +++   D + YV +SNI A AG+W
Sbjct: 693 RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP-GDESAYVVLSNILAGAGKW 751

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  ++V+  M  RG+RK    SW+E+KS+VH F A D  HP++ EI R++E L  E+++ 
Sbjct: 752 DEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREI 811

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT   L   DE  K   L  HSERLAIA  ++++   + + VMKNLR C DCH A 
Sbjct: 812 GYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNAT 870

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISKI  +EI VRD+ RFHHF DG CSC D+W
Sbjct: 871 KFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 281/552 (50%), Gaps = 21/552 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y+K  +L    E+F+ +  R   SWT +I  Y++  Q + A  +F  M+ + G 
Sbjct: 66  NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQE-GV 124

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D VTF  +L  C+     ++   +HA I++ G     ++ N L+  Y    C+  A  
Sbjct: 125 RCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAML 184

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ M ++D VS+NA I   A+ G  + A++LF  MQ  G +P+  T    LS     A 
Sbjct: 185 LFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSV---CAK 240

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I   R +H+ V ++   + + V+ AL   Y++   + +A+++F    E D VS+N M+  
Sbjct: 241 IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGA 300

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFS--TLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           YA +    E+      L F R      P S  TL++       L+ GR IH   +     
Sbjct: 301 YAQHGHMSEA-----ALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLD 355

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++ + N+L+DMY +CG  EEA+ +F  +   + V W  MI+   QKG ++ AL LF  M
Sbjct: 356 RDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRM 414

Query: 368 CRANISADQATFASILRASA----ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
               ++  +AT+ ++L A A    E  +++ G++LHS ++  G+ S    G+A++ MYA 
Sbjct: 415 QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYAS 474

Query: 424 SGSLKDAIQTFKE--MPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
            G++ +A  +F+   M +R ++VSWNA+IS+ +Q+G  +  L  F  M   G  P+ ++ 
Sbjct: 475 CGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITC 534

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           ++VL AC+    + EG+   + +     +        ++  +  R G  + A ++  ++ 
Sbjct: 535 VAVLDACAGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVA 593

Query: 541 FEPDEIMWSSVI 552
            E D ++++++I
Sbjct: 594 VERDVVIFNAMI 605



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 242/529 (45%), Gaps = 33/529 (6%)

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + G + P ++    LL    +    ++  ++HA I+  G    L   N L+  Y K   L
Sbjct: 23  SSGATRPAHLV--RLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESL 78

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                VF  +  +D  S+  +IT + + G  + AI +F  MQ  G +    TF A L A 
Sbjct: 79  GDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKAC 138

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D++ GR +HA++V++       +AN LL +Y    CV  A  LF  M E D VS+N
Sbjct: 139 ARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWN 197

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             I   A +     +L+LF+ +Q      ++      LSV A    ++  R IH+    +
Sbjct: 198 AAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRES 254

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V+ +L   YA+ G  ++AKE+F   +    V W AM+ AY Q G++ EA  LF
Sbjct: 255 GLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    I   + T   ++ AS   +SL  G+ +H+  +  G   ++  G+ALLDMY + 
Sbjct: 315 ARMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRC 371

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS ++A   F+ +P  N VSWN +I+  +Q G  +  L+ F+ M   G  P   + L++L
Sbjct: 372 GSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLL 430

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPK--KEHYAS-------MVDILCRSGCFDEAEKL 535
            A      +    +   +M +  KL  +     YAS       +V +    G  DEA   
Sbjct: 431 EA------VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAAS 484

Query: 536 MAQMPFEP--DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             +   E   D + W+++I+S   H +     K A   F+   L   AP
Sbjct: 485 FQRGAMEDRHDVVSWNAIISSLSQHGH----GKRALGFFRRMDLHGVAP 529



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 221/464 (47%), Gaps = 15/464 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q  V +  L S Y + G+L  A+E+F+   +R  VSW  ++G Y+Q     EA  LF  M
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             + G  P  VT     +GCS          +HA  ++ G +  +++ N+L+D Y +   
Sbjct: 318 LHE-GIPPSKVTLVNASTGCSSLRFGR---MIHACALEKGLDRDIVLGNALLDMYTRCGS 373

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            + AR +F+ +P  ++VS+N +I G +++G  + A++LF  MQ  G  P   T+   L A
Sbjct: 374 PEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432

Query: 184 GVGLAD----IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--GEMPE 237
                +    +A GR++H+ +V   +     +  A++ +Y+    + EA   F  G M +
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 238 V-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
             D VS+N +I+  + +   K +L  FR +       +Q     +L   A    L  G  
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           +H     +   S V VA +L  MY +CG  E A+EIF  ++     V + AMI+AY Q G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSG 414
              EAL LF  M +     D+ +F S+L A +       G ++   + +S G   +    
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
           +  +D+  ++G L DA +  + M  +  ++ W  L+ AC +  D
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRD 716



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 10/243 (4%)

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           A    +LRA+ +   LS G+++H+ ++  G    +  G+ LL +Y K  SL D  + F  
Sbjct: 30  AHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSR 87

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           +  R+  SW  +I+A  ++G A+  +  F  M Q G + D+V+ L+VL AC+  G + +G
Sbjct: 88  LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            +  ++   +  L  K      ++ I    GC   A  L  +M  E D + W++ I +  
Sbjct: 148 -RSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANA 204

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAP-YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
              +L+ A     +LF+  +L    P  + +    +V  +      +   +RE G+ +  
Sbjct: 205 QSGDLDMAL----ELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTL 260

Query: 616 AYS 618
             S
Sbjct: 261 VVS 263


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/747 (34%), Positives = 423/747 (56%), Gaps = 3/747 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN +    LI  Y + G++  A+++F  +  +   +WT +IG Y Q+  +  A  +F  M
Sbjct: 37  QNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQM 96

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +    P  VT+  +L+ C+  ++  + +++H  I++ G+   + +  +L++ Y K   
Sbjct: 97  QEED-VMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 155

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A   FK +  +D VS+ A+I    +      A  L+  MQ  G  P+  T     +A
Sbjct: 156 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 215

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 ++ G+ V+  V       +V V N+ ++++     + +AR+LF +M + D V++
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N++IT Y  NE + E+++LF  LQ      +   F  +L+V  +   L  G+ IH     
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  VA +L+ +Y +C    +A +IF ++     + WT M  AY Q G  +EAL L
Sbjct: 336 AGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 395

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM         AT  ++L   A LA+L  G+Q+HS +I + F   +   +AL++MY K
Sbjct: 396 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGK 455

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G + +A+  F++M +R+I+ WN+++ A AQ+G    TL+ F  M   G + D+VS +SV
Sbjct: 456 CGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSV 515

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP-FE 542
           LSA SH G + +G QYF +M Q + + P  E Y  +VD+L R+G   EA  ++ ++    
Sbjct: 516 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL 575

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+W +++ +CR H   + AK AA+Q+ + +     A YV +SN+YA AG W+ V+++
Sbjct: 576 PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGA-YVVLSNVYAAAGDWDGVNRM 634

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR RGV+K    S +E+ ++VH F   D  HP+ + I  +++ L  EM+  GY PDT
Sbjct: 635 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 694

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD ++E K + L YHSERLAIAF LI+TP G+P+ V+KNLR C+DCH A K ISK+
Sbjct: 695 KMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKL 754

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
            GREI VRD+ RFH+FKDG CSC+D+W
Sbjct: 755 RGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 242/488 (49%), Gaps = 2/488 (0%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD   F  LL  CS     +   +VH  +   G+    ++C  L+  Y +   +  A++V
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F+ + +KD  ++  +I  + ++G  + A+ +F +MQ     P+  T+ A L+A      +
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G ++H  +++  F  +VFV  AL+++Y+K   V  A   F  +   D VS+  MI   
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             ++Q+  +  L+R +Q      ++    T+ +   +   L  G+ ++         S+V
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           +V NS V+M+   G   +A+ +F ++     V W  +I+ YVQ  N  EA+ LF  + + 
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            + A+  TF  +L     L SL+ GK +H  V  +G+  +    +AL+ +Y +  +   A
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F +M  +++++W  +  A AQNG  +  L+ F++M   G +P S +L++VL  C+H 
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             +++G Q  + + +  + R +     +++++  + G   EA  +  +M  + D ++W+S
Sbjct: 422 AALQKGRQIHSHIIEN-RFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILVWNS 479

Query: 551 VINSCRIH 558
           ++ +   H
Sbjct: 480 MLGAYAQH 487



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 6/412 (1%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           KP    F A L       ++  GR+VH  V    F +N  V   L+ +Y++   V EA++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F  +   D  ++  MI  Y     Y  +L +F ++Q      ++  +  +L+  A+   
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L+ G +IH Q +      +V V  +L++MY KCG    A + F  L H   V WTAMI+A
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
            VQ      A  L+  M    +  ++ T  ++  A  +   LS GK ++  V      S+
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V   ++ ++M+  +G L DA + F++M +R++V+WN +I+   QN +    ++ F  + Q
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G + + ++ + +L+  +    + +G +  + + ++           +++ +  R     
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVATALMSLYGRCEAPG 359

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +A K+   M    D I W+ +   C  +    F K+A  QLF+  +L    P
Sbjct: 360 QAWKIFVDMG-SKDVITWTVM---CVAYAQNGFRKEAL-QLFQEMQLEGRRP 406



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 96/181 (53%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ V    L+S Y +      A ++F  M  +  ++WT++   Y+Q    +EA +LF +
Sbjct: 339 DRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQE 398

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  P   T   +L  C+      +  Q+H+ II+  +   +++  +L++ Y K  
Sbjct: 399 MQLE-GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCG 457

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A  VF++M ++D + +N+++  +A+ G  +E ++LF +MQ  G K    +F + LS
Sbjct: 458 KMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLS 517

Query: 183 A 183
           A
Sbjct: 518 A 518


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/736 (34%), Positives = 412/736 (55%), Gaps = 3/736 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YV  G+L   R++F+ +++     W +L+  Y++   FRE+  LF  M+  G    
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            Y TF  +L   +      E  +VH  ++K G+ S   + NSL+ +Y K   ++ A  +F
Sbjct: 195 CY-TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 253

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+ + D VS+N++I G    G +   +++F++M  LG +    T  + L A   + +++
Sbjct: 254 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLS 313

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR +H F VK  F E V  +N LLD+YSK   +  A ++F +M +   VS+  +I  Y 
Sbjct: 314 LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYV 373

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
               Y +++ LF E+Q        +  ++++   A    L  GR +H+  I     S + 
Sbjct: 374 REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP 433

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V N+L++MYAKCG  EEA+ +F+ +     V W  MI  Y Q     EAL LF++M +  
Sbjct: 434 VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQ 492

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  T A +L A A LA+L  G+++H  ++R G+ S++    AL+DMYAK G L  A 
Sbjct: 493 FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 552

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +P+++++SW  +I+    +G     + +F +M  +G +PD  S  ++L+ACSH G
Sbjct: 553 LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSG 612

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+ EG ++FNSM  +  + PK EHYA +VD+L R G   +A K +  MP +PD  +W  +
Sbjct: 613 LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 672

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           ++ CRIH +++ A+K A+ +F++E   +   YV ++N+YA A +WE V +++K M++RG 
Sbjct: 673 LSGCRIHHDVKLAEKVAEHIFELEP-DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 731

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           ++    SW+E+  K ++F A +  HPQ  +I   +  L  +M+ E Y       L +ED+
Sbjct: 732 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDD 791

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K      HSE+ A+AF ++N P G  + V KN R C DCH   K +SK T  EI +RD
Sbjct: 792 MEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRD 851

Query: 732 SSRFHHFKDGFCSCRD 747
           S+RFHHFKDG CSCRD
Sbjct: 852 SNRFHHFKDGLCSCRD 867



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 243/483 (50%), Gaps = 6/483 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT   N LI+ Y K G + +A  LF+ + +   VSW  +I G           ++F+ M 
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G + D  T  ++L  C+     +    +H   +K  ++  ++  N+L+D Y K   L
Sbjct: 289 IL-GVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 347

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A  VF +M     VS+ ++I  + +EGL  +AI LF EMQ  G +P  +T  + + A 
Sbjct: 348 NGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 407

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              + +  GR VH++V+K     N+ V NAL+++Y+K   V EAR +F ++P  D VS+N
Sbjct: 408 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 467

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y+ N    E+L+LF ++Q  +F       + +L   A    L  GR+IH   +  
Sbjct: 468 TMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRR 526

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S++ VA +LVDMYAKCG    A+ +F  +     + WT MI+ Y   G   EA++ F
Sbjct: 527 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 586

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            EM  A I  D+++F++IL A +    L+ G K  +S     G    +   + ++D+ A+
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646

Query: 424 SGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
            G+L  A +  + MP + +   W  L+S C  + D +   K  E + +   +PD+     
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYV 704

Query: 483 VLS 485
           VL+
Sbjct: 705 VLA 707



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 190/351 (54%), Gaps = 6/351 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  V +N L+  Y K GNL  A E+F  M D T VSWT +I  Y ++  + +A  LF +
Sbjct: 328 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDE 387

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M++  G  PD  T  +++  C+   + ++   VH+ +IK G  S L + N+L++ Y K  
Sbjct: 388 MQSK-GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 446

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ AR VF ++P KD VS+N +I G+++  L  EA++LF++MQ   FKP D T A  L 
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLP 505

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A  GLA +  GR++H  +++  +  ++ VA AL+D+Y+K   +V A+ LF  +P+ D +S
Sbjct: 506 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 565

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           + VMI  Y  +    E++  F E++    +  +  FS +L+  ++   L  G +      
Sbjct: 566 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMR 625

Query: 303 VTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
               + E K+ +   +VD+ A+ G   +A +   ++     T  W  ++S 
Sbjct: 626 NECGV-EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 4/226 (1%)

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F N +H  T    A I+ + + G+L  A+ L  +     +  +  ++ S+L+  AE  SL
Sbjct: 53  FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 110

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK++HS +I +G   +   G+ L+ MY   G L    + F ++    +  WN L+S  
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A+ G+ + ++  F+ M + G   +  +   VL   +  G ++E  +  +    K      
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE-CKRVHGYVLKLGFGSN 229

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                S++    + G  + A  L  ++  EPD + W+S+IN C ++
Sbjct: 230 TAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVN 274


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/664 (38%), Positives = 394/664 (59%), Gaps = 9/664 (1%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIR---CLDLARRVFKEMPQKDSVSFNALI 146
           ++L Q+HA +++ G        + +V ++C ++    L  AR VF ++P   S + N++I
Sbjct: 2   SQLKQIHAQMLRTGLFFDPFTASKIV-AFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
            G   + L++EA+  + EM   G  P  +TF +   +    ++   G+Q+H    K  F 
Sbjct: 61  RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF-RE 265
            + +  N L+++YS   C+V ARK+F +M +   VS+  MI  +A  +Q  E+++LF R 
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           ++      ++     +L+  A   DL + ++IH           V +   L+D+Y KCG 
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            + A+++F      +   W  MI+ +V+  N EEAL LF EM    I  D+ T AS+L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
              L +L LGK LH+++ +     +V  G+AL+DMYAK GS++ AIQ F EMPE+++++W
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            ALI   A  G A+  L+ F++M   G +PD+++ + VL+ACSH G ++EG+ +FNSM+ 
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            Y ++P  EHY  +VDIL R+G   EAE+L+  MP  PD+ +   ++ +CRIH NLE A+
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAE 477

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           +AA QL +++    +  YV +SNIY  + +WE   + ++ M ERG+RK    S +E+   
Sbjct: 478 RAAKQLLEIDPYH-SGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGV 536

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F   D  H Q++EI   +E+++ ++K  GY PD S  L D  EE K   L  HSE+L
Sbjct: 537 VHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKL 596

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF L++T  G+PI V+KNLR C+DCH+A KLISK+  REI VRD +RFHHFKDG CSC
Sbjct: 597 AIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSC 656

Query: 746 RDFW 749
           R FW
Sbjct: 657 RGFW 660



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 227/469 (48%), Gaps = 8/469 (1%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           +SG+L  AR +F+ + + T+ +   +I G + KN  +EA   + +M    G  PD  TF 
Sbjct: 34  ESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQ-GLIPDRYTFP 92

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           +L   C     ++E  Q+H    K G+ S     N+L++ Y    CL  AR+VF +M  K
Sbjct: 93  SLFKSCR---NSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDK 149

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
             VS+  +I   A+     EA++LF   M+    KP++ T    L+A     D+A+ +++
Sbjct: 150 TVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H ++ +  F  +V +   L+D+Y K  CV  AR LF +  E +  S+N+MI  +  +  Y
Sbjct: 210 HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           +E+L LFRE+Q       +   ++LL    +   L++G+ +H          +V +  +L
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VDMYAKCG  E A ++F  +     + WTA+I      G  E AL  F EM    +  D 
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389

Query: 377 ATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
            TF  +L A +    +  G    +S     G    +     L+D+  ++G + +A +  K
Sbjct: 390 ITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449

Query: 436 EMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLS 482
            MP   +      L+ AC  +G+ +A  ++ + +++   Y   +  LLS
Sbjct: 450 SMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLS 498



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 2/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T + N L++ Y   G L +AR++F+ M D+T VSW  +IG ++Q +Q  EA +LF  M 
Sbjct: 119 DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMM 178

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 P+ VT   +L+ C+       + ++H  I + G+   +++   L+D YCK  C+
Sbjct: 179 KSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            LAR +F +  +K+  S+N +I G  ++   EEA+ LF EMQ  G K    T A+ L A 
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLAC 298

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  + LG+ +HA++ K     +V +  AL+D+Y+K   +  A ++F EMPE D +++ 
Sbjct: 299 THLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I   A   Q + +L+ F E+           F  +L+  ++   +  G         T
Sbjct: 359 ALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418

Query: 305 TAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEA 360
             I   ++    LVD+  + GR  EA+E+  ++           ++ A    GNLE A
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAA 476



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++ V   +L+  Y K G +  AR+LF+   ++   SW I+I G+ + + + EA  LF +
Sbjct: 219 GRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFRE 278

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+T  G   D VT A+LL  C+          +HA I K   +  + +  +LVD Y K  
Sbjct: 279 MQTK-GIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCG 337

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A +VF EMP+KD +++ ALI G A  G  E A++ F EM   G KP   TF   L+
Sbjct: 338 SIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLA 397

Query: 183 A--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A    G  D  +    ++          +     L+D+  +   + EA +L   MP
Sbjct: 398 ACSHAGFVDEGIS-HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/731 (36%), Positives = 413/731 (56%), Gaps = 5/731 (0%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G +  AR++F S+       + +L+ G+S       +  +F  +R      P+  T+A  
Sbjct: 66  GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +S  S          +H   I  G +S L++ +++V  Y K   ++ AR+VF  MP+KD+
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT-FAAALSAGVGLADIALGRQVHA 198
           + +N +I+G+ K  +  E+I++F ++ +      D T     L A   L ++ LG Q+H+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
              KT    + +V    + LYSK   +  A  LF E    D V+YN MI  Y  N + + 
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETEL 305

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           SL LF+EL  +    ++   STL+S+V     L +   IH  ++ +  +S   V+ +L  
Sbjct: 306 SLSLFKELMLSG---AKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTT 362

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           +Y+K    E A+++F      S   W AMIS Y Q G  E+A++LF EM  +  S +  T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVT 422

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
              IL A A+L +LSLGK +H  V  + F S+++  +AL+ MYAK GS+ +A + F  MP
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP 482

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           ++N V+WN +IS    +G  Q  L  F +M+ SG  P  V+ L VL ACSH GL++EG +
Sbjct: 483 KKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDE 542

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            FNSM  +Y   P  +HYA +VDIL R+G    A + +  MP +P   +W +++ +CRIH
Sbjct: 543 IFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIH 602

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
           K+   A+  +++LF+++   +   +V +SNI++    +   + V++  ++R + K   Y+
Sbjct: 603 KDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
            +E+    HVFT+ D+ HPQ   I  K+E L  +M++ GY+P+T  ALHD +EE +   +
Sbjct: 662 LIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMV 721

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
           K HSERLAIAF LI T  G+ I ++KNLR C DCH A KLISKIT R I VRD++RFHHF
Sbjct: 722 KVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHF 781

Query: 739 KDGFCSCRDFW 749
           KDG CSC D+W
Sbjct: 782 KDGVCSCGDYW 792



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 233/473 (49%), Gaps = 11/473 (2%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           + L Q HA I+  G+ + + +   L      +  +  AR +F  + + D   FN L+ GF
Sbjct: 34  SHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93

Query: 150 AKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +       ++ +F  ++     KP+  T+A A+SA  G  D   G  +H   +       
Sbjct: 94  SVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSE 153

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-- 266
           + + + ++ +Y K   V +ARK+F  MPE D + +N MI+ Y  NE Y ES+++FR+L  
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213

Query: 267 -QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
              TR D +      +L  VA   +L++G QIH+    T   S   V    + +Y+KCG+
Sbjct: 214 ESCTRLDTTT--LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            + A  +F        V + AMI  Y   G  E +L+LF E+  +      +T  S++  
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV 331

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           S  L    L   +H + ++S F+S+    +AL  +Y+K   ++ A + F E PE+++ SW
Sbjct: 332 SGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           NA+IS   QNG  +  +  F +M  S + P+ V++  +LSAC+  G +  G ++ + + +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVR 447

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                       +++ +  + G   EA +L   MP + +E+ W+++I+   +H
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYGLH 499



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 235/476 (49%), Gaps = 7/476 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++  Y K   +  AR++F+ M ++  + W  +I GY +   + E+ ++F D+  +  +  
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   +L   +E       +Q+H+   K G  S   +    +  Y K   + +A  +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF 279

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +E  + D V++NA+I G+   G  E ++ LF E+   G K    T  + +        + 
Sbjct: 280 REFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVS---GHLM 336

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           L   +H + +K+NF+ +  V+ AL  +YSK + +  ARKLF E PE    S+N MI+ Y 
Sbjct: 337 LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   ++++ LFRE+Q + F  +    + +LS  A    L +G+ +H     T   S + 
Sbjct: 397 QNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+ +L+ MYAKCG   EA+ +F  +   + V W  MIS Y   G+ +EAL +F EM  + 
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSG 516

Query: 372 ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           I+    TF  +L A +    +  G ++ +S + R GF  +V   + ++D+  ++G L+ A
Sbjct: 517 IAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRA 576

Query: 431 IQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           +Q  + MP +   S W  L+ AC  + D        E + +    PD+V    +LS
Sbjct: 577 LQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 119/241 (49%), Gaps = 3/241 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +  +VST  L + Y K   + +AR+LF+   +++  SW  +I GY+Q     +A  LF +
Sbjct: 352 SHTSVST-ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+    S P+ VT   +LS C++    +    VH  +    + S + +  +L+  Y K  
Sbjct: 411 MQNSEFS-PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  ARR+F  MP+K+ V++N +I+G+   G  +EA+ +F EM + G  P+  TF   L 
Sbjct: 470 SIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLY 529

Query: 183 AGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           A      +  G ++ ++ + +  F  +V     ++D+  +   +  A +    MP   G 
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGP 589

Query: 242 S 242
           S
Sbjct: 590 S 590


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/655 (37%), Positives = 386/655 (58%), Gaps = 2/655 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VH  ++K+G+ +   +CN+L+  Y K   ++ A  VF EMPQ+D +S+N++I G A  GL
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            ++A++LFV M   G +    T  + + A V      +G  VH + V+T  +    + NA
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           LLD+YS         K+F  M + + VS+  MIT Y     + +   LF+E+        
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F  ++ L   A    L+ G+ +H   I       + VAN+L++MY KCG  EEA+ IF 
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFD 245

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
           +++   T+ W  +I  Y +     EA  LF EM    +  +  T A IL A+A L+SL  
Sbjct: 246 HVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLER 304

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+++H++ +R G++ + F  +AL+DMY K G+L  A + F  +  +N++SW  +I+    
Sbjct: 305 GREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGM 364

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G  +  +  FE M  SG QPD+ S  ++L ACSH GL +EG ++FN+M  ++++ PK +
Sbjct: 365 HGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLK 424

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HYA MVD+LC +G   EA + +  MP EPD  +W S++  CRIH+N++ A+K A+ +F++
Sbjct: 425 HYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFEL 484

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           E   +   YV ++NIYA A +WE+V ++K  +  RG+R+ T  SW+E++ K H+F A + 
Sbjct: 485 EP-ENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENR 543

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HPQ   I   ++++ + M++EG+ P    AL   D+ +  E+L  HS +LA+AF ++N 
Sbjct: 544 NHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNL 603

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +G PI V KN R C+ CH A K ISK+ GREI +RDS+RFHHF++G CSCR +W
Sbjct: 604 SQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 222/445 (49%), Gaps = 4/445 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y KS  +  A  +F+ M  R  +SW  +IGG +    + +A +LFV M  + G 
Sbjct: 23  NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLE-GQ 81

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + D  T  +++  C +   +     VH   ++ G  S   + N+L+D Y          +
Sbjct: 82  ELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNK 141

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ M QK+ VS+ A+IT + + G  ++   LF EM   G +P  F   +AL A  G   
Sbjct: 142 IFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNES 201

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VH + ++    E + VANAL+++Y K   + EAR +F  + + D +S+N +I  
Sbjct: 202 LKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGG 261

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y+ +    E+  LF E+   +   +    + +L   A+   L+ GR++H   +    + +
Sbjct: 262 YSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLED 320

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             VAN+LVDMY KCG    A+ +F  L++ + + WT MI+ Y   G   +A+ LF +M  
Sbjct: 321 NFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKG 380

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLK 428
           + I  D  +F++IL A +       G +  + +     +       A ++D+   +G+LK
Sbjct: 381 SGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLK 440

Query: 429 DAIQTFKEMP-ERNIVSWNALISAC 452
           +A +  + MP E +   W +L+  C
Sbjct: 441 EAYEFIETMPIEPDSSIWVSLLRGC 465



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 9/369 (2%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G  VH ++VK  F     V NAL+  Y+K + + +A  +F EMP+ D +S+N +I   A 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ---IGRQIHTQTIVTTAISE 309
           N  Y ++++LF  +     +  +   +TLLSV+   +      IG  +H  ++ T  ISE
Sbjct: 63  NGLYDKAVELFVRMW---LEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISE 119

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             + N+L+DMY+ C  +    +IF N+   + V WTAMI++Y + G+ ++   LF EM  
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I  D     S L A A   SL  GK +H + IR+G    +   +AL++MY K G +++
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEE 239

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  + +++ +SWN LI   +++  A      F +M+    +P++V++  +L A + 
Sbjct: 240 ARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAAS 298

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +E G +      ++  L       A +VD+  + G    A +L   M    + I W+
Sbjct: 299 LSSLERGREMHAYAVRRGYLEDNFVANA-LVDMYVKCGALLLARRLF-DMLTNKNLISWT 356

Query: 550 SVINSCRIH 558
            +I    +H
Sbjct: 357 IMIAGYGMH 365


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 410/736 (55%), Gaps = 3/736 (0%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  YV  G+L   R++F+ +++     W +L+  Y++   FRE+  LF  M+  G    
Sbjct: 410  LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
             Y TF  +L   +      E  +VH  ++K G+ S   + NSL+ +Y K   ++ A  +F
Sbjct: 470  CY-TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLF 528

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             E+ + D VS+N++I G    G +   +++F++M  LG +    T  + L A   + +++
Sbjct: 529  DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588

Query: 192  LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            LGR +H F VK  F E V  +N LLD+YSK   +  A ++F +M +   VS+   I  Y 
Sbjct: 589  LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYV 648

Query: 252  WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                Y +++ LF E+Q        +  ++++   A    L  GR +H+  I     S + 
Sbjct: 649  REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP 708

Query: 312  VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            V N+L++MYAKCG  EEA+ +F+ +     V W  MI  Y Q     EAL LF++M +  
Sbjct: 709  VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQ 767

Query: 372  ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
               D  T A +L A A LA+L  G+++H  ++R G+ S++    AL+DMYAK G L  A 
Sbjct: 768  FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 827

Query: 432  QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
              F  +P+++++SW  +I+    +G     + +F +M  +G +PD  S   +L+ACSH G
Sbjct: 828  LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSG 887

Query: 492  LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            L+ EG ++FNSM  +  + PK EHYA +VD+L R G   +A K +  MP +PD  +W  +
Sbjct: 888  LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 947

Query: 552  INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
            ++ CRIH +++ A+K A+ +F++E   +   YV ++N+YA A +WE V +++K M++RG 
Sbjct: 948  LSGCRIHHDVKLAEKVAEHIFELEP-DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 1006

Query: 612  RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            ++    SW+E+  K ++F A +  HPQ   I   +  L  +M+ E Y       L +ED+
Sbjct: 1007 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDD 1066

Query: 672  EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
              K      HSE+ A+AF ++N P G  + V KN R C DCH   K +SK T REI +RD
Sbjct: 1067 MEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRD 1126

Query: 732  SSRFHHFKDGFCSCRD 747
            S+RFHHFKDG CSCRD
Sbjct: 1127 SNRFHHFKDGLCSCRD 1142



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 240/483 (49%), Gaps = 6/483 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT   N LI+ Y K G + +A  LF+ + +   VSW  +I G           ++F+ M 
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G + D  T  ++L   +     +    +H   +K  ++  ++  N+L+D Y K   L
Sbjct: 564 IL-GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 622

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A  VF +M     VS+ + I  + +EGL  +AI LF EMQ  G +P  +T  + + A 
Sbjct: 623 NGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 682

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              + +  GR VH++V+K     N+ V NAL+++Y+K   V EAR +F ++P  D VS+N
Sbjct: 683 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 742

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y+ N    E+L+LF ++Q  +F       + +L   A    L  GR+IH   +  
Sbjct: 743 TMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRR 801

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S++ VA +LVDMYAKCG    A+ +F  +     + WT MI+ Y   G   EA++ F
Sbjct: 802 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 861

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            EM  A I  D+++F+ IL A +    L+ G K  +S     G    +   + ++D+ A+
Sbjct: 862 NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
            G+L  A +  + MP + +   W  L+S C  + D +   K  E + +   +PD+     
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFE--LEPDNTRYYV 979

Query: 483 VLS 485
           VL+
Sbjct: 980 VLA 982



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 189/351 (53%), Gaps = 6/351 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  V +N L+  Y K GNL  A E+F  M D T VSWT  I  Y ++  + +A  LF +
Sbjct: 603 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDE 662

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M++  G  PD  T  +++  C+   + ++   VH+ +IK G  S L + N+L++ Y K  
Sbjct: 663 MQSK-GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ AR VF ++P KD VS+N +I G+++  L  EA++LF++MQ   FKP D T A  L 
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLP 780

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A  GLA +  GR++H  +++  +  ++ VA AL+D+Y+K   +V A+ LF  +P+ D +S
Sbjct: 781 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 840

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           + VMI  Y  +    E++  F E++    +  +  FS +L+  ++   L  G +      
Sbjct: 841 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMR 900

Query: 303 VTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
               + E K+ +   +VD+ A+ G   +A +   ++     T  W  ++S 
Sbjct: 901 NECGV-EPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 127/282 (45%), Gaps = 12/282 (4%)

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F N +H  T    A I+ + + G+L  A+ L  +     +  +  ++ S+L+  AE  SL
Sbjct: 328 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 385

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK++HS +I +G   +   G+ L+ MY   G L    + F ++    +  WN L+S  
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A+ G+ + ++  F+ M + G   +  +   VL   +  G ++E  +  +    K      
Sbjct: 446 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE-CKRVHGYVLKLGFGSN 504

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
                S++    + G  + A  L  ++  EPD + W+S+IN C ++    F+    +   
Sbjct: 505 TAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG---FSGNGLEIFI 560

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVK--KAMRERGVR 612
           +M  L      V ++ + +V   W ++  +   +A+   GV+
Sbjct: 561 QMLIL---GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVK 599


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/759 (35%), Positives = 437/759 (57%), Gaps = 18/759 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMV---DRTAVSWTILIGGYSQKNQFREAFKLFV 61
           ++V  N LIS Y KSG+ A A ++F +M     R  VSW+ ++  Y    +  +A K+FV
Sbjct: 96  DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCK 120
           +    G    DY  +  ++  CS  D           ++K G + S + +  SL+D + K
Sbjct: 156 EFLELGLVPNDYC-YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 121 IR-CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
                + A +VF +M + + V++  +IT   + G   EAI+ F++M   GF+   FT ++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMP 236
             SA   L +++LG+Q+H++ +++  V++V    +L+D+Y+K      V + RK+F  M 
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332

Query: 237 EVDGVSYNVMITCYAWN-EQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           +   +S+  +IT Y  N     E++ LF E+      + + F FS+      N  D ++G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           +Q+  Q       S   VANS++ M+ K  R E+A+  F +LS  + V +   +    + 
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
            N E+A  L  E+    +     TFAS+L   A + S+  G+Q+HS V++ G   N    
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +AL+ MY+K GS+  A + F  M  RN++SW ++I+  A++G A   L++F  M++ G +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ V+ +++LSACSH GL+ EG ++FNSM + +K++PK EHYA MVD+LCR+G   +A +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            +  MPF+ D ++W + + +CR+H N E  K AA ++ +++   + A Y+ +SNIYA AG
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP-NEPAAYIQLSNIYACAG 691

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +WE  +++++ M+ER + K    SW+E+  K+H F   D  HP  ++I  +++ L+ E+K
Sbjct: 692 KWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751

Query: 655 KEGYKPDTSCALHD----EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           + GY PDT   LH      DE  K   L  HSE++A+AF LI+T +  P+ V KNLR C 
Sbjct: 752 RCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCG 811

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH A+K IS ++GREI +RD +RFHHFKDG CSC D+W
Sbjct: 812 DCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 280/548 (51%), Gaps = 18/548 (3%)

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  DG    D VTF++LL  C           VHA +I+F      ++ NSL+  Y K  
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 123 CLDLARRVFKEM---PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               A  VF+ M    ++D VS++A++  +   G   +AIK+FVE   LG  P+D+ + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 180 ALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPE 237
            + A      + +GR    F++KT +F  +V V  +L+D++ K +   E A K+F +M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           ++ V++ +MIT        +E+++ F ++  + F+  +F  S++ S  A   +L +G+Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           H+  I +  + +V+   SLVDMYAKC   G  ++ +++F  +   S + WTA+I+ Y++ 
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 355 GNL-EEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
            NL  EA+NLF EM  + ++  +  TF+S  +A   L+   +GKQ+     + G  SN  
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             ++++ M+ KS  ++DA + F+ + E+N+VS+N  +    +N + +   K   ++ +  
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
               + +  S+LS  ++ G I +G Q  +S   K  L   +    +++ +  + G  D A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIH----KNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            ++   M    + I W+S+I     H    + LE   +  ++  K  ++   A   A S+
Sbjct: 529 SRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587

Query: 589 IYAVAGQW 596
           +  V+  W
Sbjct: 588 VGLVSEGW 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 291/644 (45%), Gaps = 107/644 (16%)

Query: 165 MQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
           M   G +P D  TF++ L + +   D  LG+ VHA +++ +   +  + N+L+ LYSK  
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 224 CVVEARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
              +A  +F  M      D VS++ M+ CY  N +  +++K+F E        + + ++ 
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC-GRFEEAKEIFANLSH 338
           ++   +N   + +GR      + T    S+V V  SL+DM+ K    FE A ++F  +S 
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
           ++ V WT MI+  +Q G   EA+  F++M  +   +D+ T +S+  A AEL +LSLGKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           HS+ IRSG + +V    +L+DMYAK    GS+ D  + F  M + +++SW ALI+   +N
Sbjct: 292 HSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 456 GD-AQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHC----------------GL----- 492
            + A   +  F +M+  G+ +P+  +  S   AC +                 GL     
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 493 --------------IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
                         +E+  + F S+++K  +      Y + +D  CR+  F++A KL+++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVS-----YNTFLDGTCRNLNFEQAFKLLSE 464

Query: 539 MP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +           ++S+++      ++   ++   Q+ K+    +     A+ ++Y+  G 
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKV--HVFTANDELHPQTNEIRRKIENLMQEM 653
            ++ S+V   M  R V      SW  + +    H F              R +E   Q M
Sbjct: 525 IDTASRVFNFMENRNV-----ISWTSMITGFAKHGFAI------------RVLETFNQ-M 566

Query: 654 KKEGYKPD--------TSCALHD-------------EDEEIKVESLKY--------HSER 684
            +EG KP+        ++C+                ED +IK +   Y         +  
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626

Query: 685 LAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           L  AF  INT P  + +LV +        H+  +L  K+  R+I
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL-GKLAARKI 669



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 186/444 (41%), Gaps = 66/444 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M + + +S   LI+GY+K+ NLAT                              EA  LF
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLAT------------------------------EAINLF 360

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M T G  +P++ TF++    C          QV     K G  S   + NS++  + K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+R F+ + +K+ VS+N  + G  +    E+A KL  E+       S FTFA+ 
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS    +  I  G Q+H+ VVK     N  V NAL+ +YSK   +  A ++F  M   + 
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHT 299
           +S+  MIT +A +      L+ F ++       ++  +  +LS  ++   +  G R  ++
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                    +++    +VD+  + G   +A E       I+T+P+ A +  +        
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF------INTMPFQADVLVW-------- 646

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
               F+  CR + + +    A+  R   EL        +                  L +
Sbjct: 647 --RTFLGACRVHSNTELGKLAA--RKILELDPNEPAAYIQ-----------------LSN 685

Query: 420 MYAKSGSLKDAIQTFKEMPERNIV 443
           +YA +G  +++ +  ++M ERN+V
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLV 709



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 121/263 (46%), Gaps = 9/263 (3%)

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRS 405
           +I  ++  G+L  A++    M R  I   D  TF+S+L++        LGK +H+ +I  
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 406 GFMSNVFSGSALLDMYAKSGS---LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
               +    ++L+ +Y+KSG     +D  +T +   +R++VSW+A+++    NG     +
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           K F + ++ G  P+     +V+ ACS+   +  G      + +            S++D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 523 LCRS-GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
             +    F+ A K+  +M  E + + W+ +I  C     + F ++A      M      +
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFES 267

Query: 582 PYVAMSNIYAVAGQWESVSQVKK 604
               +S++++   + E++S  K+
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQ 290


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/743 (34%), Positives = 415/743 (55%), Gaps = 6/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K G+L  AR LF+S  M     VSW  +I  +  + +  EA  LF  M+  G
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                Y TF + L  C  P        +HA I+K  + + + + N+L+  Y     ++ A
Sbjct: 247 VESNTY-TFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            RVFK M  KD VS+N L++G  +  +  +AI  F +MQ  G KP   +    ++A    
Sbjct: 306 ERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRS 365

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           A++  G +VHA+ +K     N+ + N+L+D+Y K  CV      F  MPE D +S+  +I
Sbjct: 366 ANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTII 425

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA NE + ++L L R++Q  + D       ++L   +     ++ ++IH   ++   +
Sbjct: 426 AGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY-VLKGGL 484

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +++ + N++V++Y +    + A+ +F +++    V WT+MI+  V  G   EAL LF  +
Sbjct: 485 ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSL 544

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              NI  D  T  S+L A+A L+SL  GK++H F+IR GF       ++L+DMYA+ G++
Sbjct: 545 IETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTM 604

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           ++A   F  + +R+++ W ++I+A   +G  +  +  F  M      PD ++ L++L AC
Sbjct: 605 ENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYAC 664

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG Q+F  M  +YKL P  EHYA +VD+L RS   +EA   +  MP EP   +
Sbjct: 665 SHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEV 724

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CRIH N +  + AA +L ++    ++  YV +SN +A  G+W  V +V+  M+
Sbjct: 725 WCALLGACRIHSNNDLGEVAAKKLLQLNT-ENSGNYVLVSNTFAADGRWNDVEEVRSIMK 783

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK-KEGYKPDTSCAL 666
              ++K    SW+E+++K+H F A D+ HPQ N I  K+    + +K K GY+  T    
Sbjct: 784 GNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVF 843

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD  EE K + L  HSERLA+ + L+ T +G+ + + KNLR C DCHA  K+ S+I+ R 
Sbjct: 844 HDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRT 903

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRD+SRFHHF+ G CSC DFW
Sbjct: 904 LVVRDASRFHHFERGLCSCGDFW 926



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 301/584 (51%), Gaps = 16/584 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G+   A ++F+ M +RT  +W  +IG      ++ EA +L+ +MR  G S  D  T
Sbjct: 92  YGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS-LDAFT 150

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE-- 133
           F  +L  C          ++H   +K GY   + +CN+L+  Y K   L  AR +F    
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           M + D VS+N++I+    EG + EA+ LF  MQ +G + + +TF +AL A  G   I +G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +HA ++K+N   +V+V+NAL+ +Y+    + +A ++F  M   D VS+N +++    N
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQN 330

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           + Y +++  F+++Q +     Q     +++      +L  G ++H   I     S + + 
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           NSL+DMY KC   +     F  +     + WT +I+ Y Q     +ALNL  ++    + 
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D     SIL A + L S  L K++H +V++ G ++++   +A++++Y +   +  A   
Sbjct: 451 VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGG-LADILIQNAIVNVYGELALVDYARHV 509

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F+ +  ++IVSW ++I+ C  NG A   L+ F  ++++  +PD ++L+SVL A +    +
Sbjct: 510 FESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569

Query: 494 EEGLQYFNSMTQK-YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++G +    + +K + L     +  S+VD+  R G  + A  +   +  + D I+W+S+I
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVK-QRDLILWTSMI 626

Query: 553 NSCRIHKNLEFAKKAADQLFKMEK---LRDAAPYVAMSNIYAVA 593
           N+  +H      K A D   KM     L D   ++A+  +YA +
Sbjct: 627 NANGMHG---CGKDAIDLFSKMTDENVLPDHITFLAL--LYACS 665



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 228/447 (51%), Gaps = 6/447 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y   G +  A  +F SM+ +  VSW  L+ G  Q + + +A   F DM+ D G
Sbjct: 289 SNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ-DSG 347

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD V+   +++           ++VHA  IK G +S + I NSL+D Y K  C+    
Sbjct: 348 QKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMG 407

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F+ MP+KD +S+  +I G+A+   + +A+ L  ++Q            + L A  GL 
Sbjct: 408 SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLK 467

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              L +++H +V+K    + + + NA++++Y +   V  AR +F  +   D VS+  MIT
Sbjct: 468 SEKLIKEIHGYVLKGGLAD-ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMIT 526

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           C   N    E+L+LF  L  T  +       ++L   A    L+ G++IH   I      
Sbjct: 527 CCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFL 586

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           E  +ANSLVDMYA+CG  E A+ IF  +     + WT+MI+A    G  ++A++LF +M 
Sbjct: 587 EGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGS 426
             N+  D  TF ++L A +    +  GKQ H  ++++ +    +    + L+D+ A+S S
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNS 705

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L++A    + MP E +   W AL+ AC
Sbjct: 706 LEEAYHFVRNMPIEPSAEVWCALLGAC 732



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 248/525 (47%), Gaps = 23/525 (4%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNS 106
           S K  F+     F D        P    ++  L  C+      +  Q+HA  +K   Y  
Sbjct: 21  SLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLD 80

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            + +    V  Y K      A +VF +M ++   ++NA+I      G   EAI+L+ EM+
Sbjct: 81  SVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMR 140

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            LG     FTF   L A     +  LG ++H   VK  +   VFV NAL+ +Y+K   + 
Sbjct: 141 VLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLG 200

Query: 227 EARKLF--GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
            AR LF  G M + D VS+N +I+ +    +  E+L LFR +Q    + + + F + L  
Sbjct: 201 GARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQA 260

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                 ++IGR IH   + +   ++V V+N+L+ MYA CG+ E+A+ +F ++     V W
Sbjct: 261 CEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSW 320

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             ++S  VQ     +A+N F +M  +    DQ +  +++ AS   A+L  G ++H++ I+
Sbjct: 321 NTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIK 380

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G  SN+  G++L+DMY K   +K     F+ MPE++++SW  +I+  AQN      L  
Sbjct: 381 HGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNL 440

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
              +       D + + S+L ACS  GL  E L         Y L+        + DIL 
Sbjct: 441 LRKVQLEKMDVDPMMIGSILLACS--GLKSEKLI---KEIHGYVLK------GGLADILI 489

Query: 525 RSGCFDEAEKL----MAQMPFEP----DEIMWSSVINSCRIHKNL 561
           ++   +   +L     A+  FE     D + W+S+I  C +H  L
Sbjct: 490 QNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC-VHNGL 533


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/738 (35%), Positives = 414/738 (56%), Gaps = 5/738 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ GNL  A  +F  M  R   SW +L+GGY++   F EA  L+  M   G  
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG-V 203

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          ++H  +I++G+ S + + N+L+  Y K   ++ AR 
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARL 263

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +MP +D +S+NA+I+G+ + G+  E ++LF  M      P   T  + ++A   L D
Sbjct: 264 VFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LGRQ+H +V++T F  +  + N+L+ +YS    + EA  +F      D VS+  MI+ 
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISG 383

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y      +++L+ ++ ++       +   + +LS  +   +L +G  +H        +S 
Sbjct: 384 YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSY 443

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             VANSL+DMYAKC   ++A EIF +    + V WT++I          EAL  F EM R
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR 503

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  T   +L A A + +L+ GK++H+  +R+G   + F  +A+LDMY + G ++ 
Sbjct: 504 -RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEY 562

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F  + +  + SWN L++  A+ G      + F+ MV+S   P+ V+ +S+L ACS 
Sbjct: 563 AWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSR 621

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ EGL+YFNSM  KY + P  +HYA +VD+L RSG  +EA + + +MP +PD  +W 
Sbjct: 622 SGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWG 681

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++NSCRIH ++E  + AA+ +F+ +       Y+ +SN+YA  G+W+ V++V+K MR+ 
Sbjct: 682 ALLNSCRIHHHVELGELAAENIFQ-DDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQN 740

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+      SWVE+K  VH F ++D  HPQ  EI   +E   ++MK+ G +   S  + D 
Sbjct: 741 GLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHM-DI 799

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E  K +    HSERLAI F LIN+  G PI V KNL  C  CH  +K IS+   REI+V
Sbjct: 800 MEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISV 859

Query: 730 RDSSRFHHFKDGFCSCRD 747
           RD+ +FHHFK G CSC D
Sbjct: 860 RDAEQFHHFKGGICSCTD 877



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 215/454 (47%), Gaps = 36/454 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN++ +S N +ISGY ++G       LF  M+                           
Sbjct: 268 MPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPV----------------------- 304

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                    DPD +T  ++++ C          Q+H  +++  +     I NSL+  Y  
Sbjct: 305 ---------DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSS 355

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  ++ A  VF     +D VS+ A+I+G+    + ++A++ +  M+  G  P + T A  
Sbjct: 356 VGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIV 415

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA   L ++ +G  +H    +   V    VAN+L+D+Y+K  C+ +A ++F    E + 
Sbjct: 416 LSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNI 475

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  +I     N +  E+L  FRE+   R   +      +LS  A    L  G++IH  
Sbjct: 476 VSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAH 534

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            + T    +  + N+++DMY +CGR E A + F ++ H     W  +++ Y ++G    A
Sbjct: 535 ALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHA 593

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLD 419
             LF  M  +N+S ++ TF SIL A +    ++ G +  +S   +   M N+   + ++D
Sbjct: 594 TELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVD 653

Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           +  +SG L++A +  ++MP + +   W AL+++C
Sbjct: 654 LLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSC 687



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 183/366 (50%), Gaps = 2/366 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G +V+++V  +    ++ + NALL ++ +   +V+A  +FG M + +  S+NV++  YA 
Sbjct: 125 GSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAK 184

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + E+L L+  + +       + F  +L       +L  GR+IH   I     S+V V
Sbjct: 185 AGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDV 244

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+ MY KCG    A+ +F  + +   + W AMIS Y + G   E L LF  M +  +
Sbjct: 245 VNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPV 304

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T  S++ A   L    LG+Q+H +V+R+ F  +    ++L+ MY+  G +++A  
Sbjct: 305 DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAET 364

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F     R++VSW A+IS        Q  L++++ M   G  PD +++  VLSACS    
Sbjct: 365 VFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCN 424

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++ G+       QK  L        S++D+  +  C D+A ++      E + + W+S+I
Sbjct: 425 LDMGMNLHEVAKQK-GLVSYSIVANSLIDMYAKCKCIDKALEIF-HSTLEKNIVSWTSII 482

Query: 553 NSCRIH 558
              RI+
Sbjct: 483 LGLRIN 488



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 33/281 (11%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           GNL+ A++    M    I  +   + +++R      +   G +++S+V  S    ++  G
Sbjct: 85  GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +ALL M+ + G+L DA   F  M +RN+ SWN L+   A+ G     L  +  M+  G +
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 475 PDSVSLLSVLSACS-----------HCGLIEEGLQY-----------------FNSMTQK 506
           PD  +   VL  C            H  +I  G +                   N+    
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 507 YKLRPKKEH--YASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNL 561
           +   P ++   + +M+     +G   E  +L   M   P +PD +  +SVI +C +  + 
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
              ++    + + E  RD + + ++  +Y+  G  E    V
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETV 365


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/749 (36%), Positives = 417/749 (55%), Gaps = 13/749 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K G    A++LF+ M  R  VSW  LI GY+Q   + E   LF + R    S
Sbjct: 58  NNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM---S 114

Query: 70  DP--DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           D   D  TF+  LS C           +HA I   G    +++ NSL+D YCK   +D A
Sbjct: 115 DLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA 174

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVG 186
           R VF+   + DSVS+N+LI G+ + G N+E ++L V+M   G   + +   +AL A G  
Sbjct: 175 RLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSN 234

Query: 187 LAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            +  I  G+ +H   VK     +V V  ALLD Y+K   + +A K+F  MP+ + V YN 
Sbjct: 235 FSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNA 294

Query: 246 MITCYAWNEQY-----KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           MI  +   E        E++ LF E+Q      S+F FS++L   +     + G+QIH Q
Sbjct: 295 MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQ 354

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                  S+  + N+LV++Y+  G  E+  + F +   +  V WT++I  +VQ G  E  
Sbjct: 355 IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGG 414

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF E+  +    D+ T + +L A A LA++  G+Q+H++ I++G  +     ++ + M
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 474

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G +  A  TFKE    +IVSW+ +IS+ AQ+G A+  +  FE M  SG  P+ ++ 
Sbjct: 475 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 534

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L VL ACSH GL+EEGL+YF  M + + + P  +H A +VD+L R+G   EAE  +    
Sbjct: 535 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 594

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FE D +MW S++++CR+HK  +  K+ A+++ ++E    AA YV + NIY  AG     +
Sbjct: 595 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEP-EAAASYVLLYNIYNDAGIQMPAT 653

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  M++RGV+K    SW+E+ + VH F A D  HP +  I  ++E +++E+KK  Y  
Sbjct: 654 EIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYID 713

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           +   +   E +      + YHSE+LA+ F +I+ P  +P+ VMKNLR+C  CH  +KL S
Sbjct: 714 EKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFS 773

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ++  REI +RD  RFH F+DG CSC D+W
Sbjct: 774 RLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 264/522 (50%), Gaps = 21/522 (4%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VT+  L+   +   +       H  +IK  +   L + N+L+  YCK    D+A+++F
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+++ VS+N+LI+G+ + G   E + LF E +    +   FTF+ ALS      D+ 
Sbjct: 78  DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR +HA +  +     V + N+L+D+Y K   +  AR +F    E+D VS+N +I  Y 
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL--DLQIGRQIHTQTIVTTAISE 309
                 E L+L  ++     + + +   + L    +     ++ G+ +H   +      +
Sbjct: 198 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 257

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL-----EEALNLF 364
           V V  +L+D YAK G  E+A +IF  +   + V + AMI+ ++Q   +      EA+ LF
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 317

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM    +   + TF+SIL+A + + +   GKQ+H+ + +    S+ F G+AL+++Y+ S
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 377

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++D ++ F   P+ ++VSW +LI    QNG  +  L  F +++ SG +PD  ++  +L
Sbjct: 378 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 437

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMP 540
           SAC++   ++ G Q        Y ++    ++     S + +  + G  D A     +  
Sbjct: 438 SACANLAAVKSGEQ-----IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 492

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             PD + WS +I+S   H     AK+A D LF++ K    AP
Sbjct: 493 -NPDIVSWSVMISSNAQHG---CAKEAVD-LFELMKGSGIAP 529



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 230/452 (50%), Gaps = 8/452 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN LI  Y K G +  AR +F S  +  +VSW  LI GY +     E  +L V M   G 
Sbjct: 158 TNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGL 217

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           +   Y   + L +  S   ++ E  + +H   +K G +  +++  +L+D+Y KI  L+ A
Sbjct: 218 NLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDA 277

Query: 128 RRVFKEMPQKDSVSFNALITGFAK-----EGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++FK MP  + V +NA+I GF +     +    EA+ LF EMQ  G KPS+FTF++ L 
Sbjct: 278 TKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILK 337

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +     G+Q+HA + K N   + F+ NAL++LYS    + +  K F   P++D VS
Sbjct: 338 ACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVS 397

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I  +  N Q++  L LF EL F+     +F  S +LS  AN   ++ G QIH   I
Sbjct: 398 WTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAI 457

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   +   + NS + MYAKCG  + A   F    +   V W+ MIS+  Q G  +EA++
Sbjct: 458 KTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD 517

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF  M  + I+ +  TF  +L A +    +  G +    + +  G   NV   + ++D+ 
Sbjct: 518 LFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLL 577

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++G L +A     +   E + V W +L+SAC
Sbjct: 578 GRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 609



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 202/393 (51%), Gaps = 9/393 (2%)

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
           +LG      T+   +        +  G+  H  ++KT F   +F+ N LL +Y K     
Sbjct: 12  YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A+KLF  MP+ + VS+N +I+ Y     Y E + LF+E + +     +F FS  LSV  
Sbjct: 72  VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
             LDL++GR IH    V+     V + NSL+DMY KCGR + A+ +F +   + +V W +
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE--LASLSLGKQLHSFVIR 404
           +I+ YV+ G+ +E L L ++M R  ++ +     S L+A      +S+  GK LH   ++
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK 251

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ-----NGDAQ 459
            G   +V  G+ALLD YAK G L+DA + FK MP+ N+V +NA+I+   Q     +  A 
Sbjct: 252 LGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFAN 311

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             +  F +M   G +P   +  S+L ACS     E G Q  ++   KY L+  +    ++
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ-IHAQIFKYNLQSDEFIGNAL 370

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           V++   SG  ++  K     P + D + W+S+I
Sbjct: 371 VELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLI 402



 Score = 45.8 bits (107), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 50/232 (21%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T+  N  I  Y K G++ +A   F    +   VSW+++I   +Q    +EA  LF  M+ 
Sbjct: 465 TIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKG 524

Query: 66  DGGSDPDYVTFATLLSGCSE---------------------PDT------------ANEL 92
            G + P+++TF  +L  CS                      P+             A  L
Sbjct: 525 SGIA-PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 583

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKI-RCLDLARRVFK---EMPQKDSVSFNALITG 148
            +  + I+  G+    ++  SL+ S C++ +  D  +RV +   E+  + + S+  L   
Sbjct: 584 AEAESFIMDSGFEGDPVMWRSLL-SACRVHKATDTGKRVAERVIELEPEAAASYVLLYNI 642

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           +   G+   A ++   M+  G K              GL+ I +G  VH+FV
Sbjct: 643 YNDAGIQMPATEIRNLMKDRGVKKEP-----------GLSWIEVGNVVHSFV 683


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/725 (37%), Positives = 406/725 (56%), Gaps = 4/725 (0%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  LF+++ +     + +LI  +S  N    A  L+  +R     +PD  T+A ++SG S
Sbjct: 61  ASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGAS 120

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                  L       I  G+ S L + +++V  Y K   +  AR+VF  M ++D+V +N 
Sbjct: 121 SLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNT 177

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +++G  K    +EAI +F +M   G      T AA L     L D+ALG  +    +K  
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  + +V   L  LYSK   +  AR LFG++ + D VSYN MI+ Y  N + + S++LF+
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           EL  +    +      L+ V      L + R IH     +  +S   V+ +L  +Y++  
Sbjct: 298 ELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLN 357

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E A+ +F   S  S   W AMIS Y Q G  E+A++LF EM +  +  +  T  SIL 
Sbjct: 358 EIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILS 417

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A A+L +LSLGK +H  + R  F SN+F  +AL+DMYAK GS+ +A + F  MPE+N V+
Sbjct: 418 ACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT 477

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WNA+IS    +G     L  F +M+ S   P  V+ LSVL ACSH GL+ EG + F SM 
Sbjct: 478 WNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMV 537

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
             +   P  EHYA MVD+L R+G  D+A   + +MP EP   +W +++ +C IHK+   A
Sbjct: 538 HDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLA 597

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           + A+D+LF+++  ++   YV +SNIY+    +   + V+  ++ R + K    + +E+ +
Sbjct: 598 RLASDKLFELDP-QNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVAN 656

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
            +H+FT+ D+ HPQ   I   +E L  +M++ G++ +T  ALHD +EE K   +K HSE+
Sbjct: 657 TLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEK 716

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LAIAF LI +  G+ I ++KNLR C DCH A K ISKIT R I VRD++RFHHFKDG CS
Sbjct: 717 LAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICS 776

Query: 745 CRDFW 749
           C D+W
Sbjct: 777 CGDYW 781



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 235/469 (50%), Gaps = 8/469 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +++ Y K   +A AR++F+ M++R  V W  ++ G  + + F EA  +F DM   GG   
Sbjct: 147 IVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM-VKGGIGF 205

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T A +L G +E       + +    +K G++S   +   L   Y K   ++ AR +F
Sbjct: 206 DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLF 265

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++ Q D VS+NA+I+G+      E +++LF E+   G K +  +    +        + 
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           L R +H F  K+  V N  V+ AL  +YS+ + +  AR LF E  E    S+N MI+ YA
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   ++++ LF+E+Q      +    +++LS  A    L +G+ +H      +  S + 
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+ +L+DMYAKCG   EA+ +F+ +   + V W AMIS Y   G   EALNLF EM  + 
Sbjct: 446 VSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505

Query: 372 ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           +S    TF S+L A +    +  G ++  S V   GF       + ++D+  ++G+L  A
Sbjct: 506 VSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565

Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQ----ATLKSFE-DMVQSGY 473
           +   ++MP E     W AL+ AC  + DA     A+ K FE D    GY
Sbjct: 566 LDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGY 614



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +  LI  Y K G++  A+ LF+ M ++ AV+W  +I GY       EA  LF +M 
Sbjct: 443 NIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEML 502

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRC 123
               S P  VTF ++L  CS      E  ++   ++   G+  +      +VD   +   
Sbjct: 503 HSRVS-PTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGN 561

Query: 124 LDLARRVFKEMP 135
           LD A    ++MP
Sbjct: 562 LDKALDFIRKMP 573



 Score = 42.4 bits (98), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 7/101 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP +N V+ N +ISGY   G    A  LFN M    V  T V++  ++   S     RE 
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529

Query: 57  FKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELIQ 94
            ++F  M  D G +P    Y     LL      D A + I+
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIR 570


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/774 (33%), Positives = 431/774 (55%), Gaps = 51/774 (6%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N V  N LI  Y     L  A  LF+ M  R +VSW++++GG+++   +   F  F ++
Sbjct: 111 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 170

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G+ PD  T   ++  C   D  N  +Q+                 +LVD Y K R 
Sbjct: 171 -IRCGARPDNYTLPFVIRACR--DLKN--LQM-----------------ALVDMYVKCRE 208

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ AR +F +M ++D V++  +I G+A+ G   E++ LF +M+  G  P        + A
Sbjct: 209 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 268

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +   R +  ++ +  F  +V +  A++D+Y+K  CV  AR++F  M E + +S+
Sbjct: 269 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 328

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI  Y ++ Q +++L LFR +  +     +   ++LL    N  +L   RQ+H Q  V
Sbjct: 329 SAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASV 388

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK--------- 354
              +  + VAN LV  Y+     ++A  +F  +    +V W+ M+  + +          
Sbjct: 389 HGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGT 448

Query: 355 -------------------GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
                              GN  E+L LF +M    +  D+    +++ A A+L ++   
Sbjct: 449 FRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 508

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           + +  ++ R  F  +V  G+A++DM+AK G ++ A + F  M E+N++SW+A+I+A   +
Sbjct: 509 RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 568

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  F  M++SG  P+ ++L+S+L ACSH GL+EEGL++F+ M + Y +R   +H
Sbjct: 569 GQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKH 628

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  +VD+L R+G  DEA KL+  M  E DE +W + + +CR HK++  A+KAA  L +++
Sbjct: 629 YTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQ 688

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
             ++   Y+ +SNIYA AG+WE V++ +  M +R ++K+  ++W+E+ +K H F+  D  
Sbjct: 689 P-QNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTT 747

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HP++ EI   +++L  +++  GY PDT+  LHD DEE+K+  L  HSE+LAIAF LI TP
Sbjct: 748 HPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATP 807

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           E +PI ++KNLR C DCH   KL+S ITGR I VRD++RFHHFK+G CSC D+W
Sbjct: 808 EHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 233/509 (45%), Gaps = 55/509 (10%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           QVHA     G    +++ N L+  Y   R LD A  +F  M  +DSVS++ ++ GFAK G
Sbjct: 99  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
                   F E+   G +P ++T    + A   L ++ +                     
Sbjct: 159 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM--------------------- 197

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+D+Y K   + +AR LF +M E D V++ VMI  YA   +  ESL LF +++      
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 257

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +    T++   A    +   R I           +V +  +++DMYAKCG  E A+EIF
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   + + W+AMI+AY   G   +AL+LF  M  + +  D+ T AS+L A     +L+
Sbjct: 318 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLT 377

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             +Q+H+     G + N+   + L+  Y+   +L DA   F  M  R+ VSW+ ++   A
Sbjct: 378 QVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFA 437

Query: 454 QNGD----------------------------AQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           + GD                            A  +L  F+ M + G  PD V++++V+ 
Sbjct: 438 KVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVF 497

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+  G + +  +  +   Q+ K +       +M+D+  + GC + A ++  +M  E + 
Sbjct: 498 ACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNV 555

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           I WS++I +   H      +KA D LF M
Sbjct: 556 ISWSAMIAAYGYHGQ---GRKALD-LFPM 580



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 178/382 (46%), Gaps = 39/382 (10%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +SA V   ++   RQVHA       +EN+ VAN L+  YS +  + +A  LF  M   D 
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           VS++VM+  +A    Y      FREL     R D    PF                    
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPF-------------------- 184

Query: 299 TQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
               V  A  ++K +  +LVDMY KC   E+A+ +F  +     V WT MI  Y + G  
Sbjct: 185 ----VIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 240

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            E+L LF +M    +  D+    +++ A A+L ++   + +  ++ R  F  +V  G+A+
Sbjct: 241 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 300

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMYAK G ++ A + F  M E+N++SW+A+I+A   +G  +  L  F  M+ SG  PD 
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 360

Query: 478 VSLLSVLSACSHCGLIEEGLQY-----FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
           ++L S+L AC +C  + +  Q       + M Q   +  K  H+ S    L      D+A
Sbjct: 361 ITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRAL------DDA 414

Query: 533 EKLMAQMPFEPDEIMWSSVINS 554
             L   M    D + WS ++  
Sbjct: 415 YGLFDGMCVR-DSVSWSVMVGG 435



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 27/293 (9%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           +S + N  +L   RQ+H Q  V   +  + VAN L+  Y+     ++A  +F  +    +
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V W+ M+  + + G+       F E+ R     D  T   ++RA  +L +L +       
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------- 197

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
                         AL+DMY K   ++DA   F +M ER++V+W  +I   A+ G A  +
Sbjct: 198 --------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 243

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           L  FE M + G  PD V++++V+ AC+  G + +  +  +   Q+ K +       +M+D
Sbjct: 244 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTAMID 302

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +  + GC + A ++  +M  E + I WS++I +   H      +KA D LF+M
Sbjct: 303 MYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ---GRKALD-LFRM 350


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/695 (37%), Positives = 396/695 (56%), Gaps = 4/695 (0%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
           A   FV M +  G+ P   TF +LL  C+          VHA +   G +S  +   +L 
Sbjct: 43  ALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSD 174
           + Y K R    ARRVF  MP +D V++NAL+ G+A+ GL   A+++ V MQ   G +P  
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            T  + L A      +A  R+ HAF +++   E V VA A+LD Y K   +  AR +F  
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  + VS+N MI  YA N   +E+L LF  +     D +       L        L  G
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
            ++H   +     S V V N+L+ MY+KC R + A  +F  L   + V W AMI    Q 
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  E+A+ LF  M   N+  D  T  S++ A A+++     + +H + IR     +V+  
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +AL+DMYAK G +  A   F    ER++++WNA+I     +G  +A ++ FE+M   G  
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+  + LSVLSACSH GL++EG +YF SM + Y L P  EHY +MVD+L R+G  DEA  
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +MP +P   ++ +++ +C++HKN+E A+++A ++F++   ++   +V ++NIYA A 
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP-QEGVYHVLLANIYANAS 580

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
            W+ V++V+ AM + G++K   +S ++LK+++H F +    H Q  EI  ++  L++E+K
Sbjct: 581 MWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK 640

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
             GY PDT  ++HD ++++K + L  HSE+LAIAF LI T  G+ I + KNLR C DCH 
Sbjct: 641 AVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHN 699

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A KLIS +TGREI +RD  RFHHFKDG CSC D+W
Sbjct: 700 ATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 235/474 (49%), Gaps = 2/474 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +   ++   L + Y K    A AR +F+ M  R  V+W  L+ GY++    R A ++ V 
Sbjct: 91  DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  PD +T  ++L  C+         + HA  I+ G   ++ +  +++D+YCK  
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR VF  MP K+SVS+NA+I G+A+ G + EA+ LF  M   G   +D +  AAL 
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  G +VH  +V+     NV V NAL+ +YSK   V  A  +F E+     VS
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI   A N   +++++LF  +Q        F   +++  +A+  D    R IH  +I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 +V V  +L+DMYAKCGR   A+ +F +      + W AMI  Y   G  + A+ 
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF EM    I  ++ TF S+L A +    +  G++  + +    G    +     ++D+ 
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            ++G L +A    ++MP +  +  + A++ AC  + + +   +S + + + G Q
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQ 564



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 177/371 (47%), Gaps = 52/371 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N+VS N +I GY ++G+   A  LFN MV+                          
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE------------------------- 256

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                  G D   V+    L  C E    +E ++VH  +++ G +S + + N+L+  Y K
Sbjct: 257 -------GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSK 309

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +DLA  VF E+ ++  VS+NA+I G A+ G +E+A++LF  MQ    KP  FT  + 
Sbjct: 310 CKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + A   ++D    R +H + ++ +  ++V+V  AL+D+Y+K   V  AR LF    E   
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +++N MI  Y  +   K +++LF E++      ++  F ++LS  ++   +  GR+  T 
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS 489

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                 +   ++   ++VD+  + G+ +EA              W     A++QK  ++ 
Sbjct: 490 MKEDYGLEPGMEHYGTMVDLLGRAGKLDEA--------------W-----AFIQKMPMDP 530

Query: 360 ALNLFIEMCRA 370
            L+++  M  A
Sbjct: 531 GLSVYGAMLGA 541



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 25/211 (11%)

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           +L  AL  F+ M  A       TF S+L+  A    L+ G+ +H+ +   G  S   + +
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQ 474
           AL +MYAK     DA + F  MP R+ V+WNAL++  A+NG A+  ++    M  + G +
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 475 PDSVSLLSVLSAC-----------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
           PDS++L+SVL AC           +H   I  GL+   ++              +++D  
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVA------------TAILDAY 206

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           C+ G    A  +   MP + + + W+++I+ 
Sbjct: 207 CKCGDIRAARVVFDWMPTK-NSVSWNAMIDG 236


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/786 (35%), Positives = 423/786 (53%), Gaps = 114/786 (14%)

Query: 76  FATLLSGCSEPDTANELIQ--VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +A  L  CS  D A+  +   VHA +I  G+       N L++ YCK   L  AR++F+E
Sbjct: 14  YAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEE 73

Query: 134 MPQ---------------------------------KDSVSFNALITGFAKEGLNEEAIK 160
           +P                                  +DSV +NA+ITG+A  G    A++
Sbjct: 74  IPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALE 133

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGV-GLADIALGRQVHAFVVKTNF-VENVFVANALLDL 218
           LF  M+   F+P DFTF + LSA V  + +     Q+H  VVKT     +  V NALL +
Sbjct: 134 LFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSV 193

Query: 219 YSKH--------DCVVEARKLFGEMPEVDGVSYNVMITCY-------------------- 250
           Y K           +V ARKLF EMP+ D +++  MIT Y                    
Sbjct: 194 YVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENL 253

Query: 251 --AWNEQ---------YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             AWN           ++E+L L R+++F         ++T++S  AN    Q+G+Q+H 
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHA 313

Query: 300 QTIVTTAISE-----VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
             I+   ++      + V+N+L+ +Y K  + +EA++IF  +   + + W A++S YV  
Sbjct: 314 Y-ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372

Query: 355 GNLEEALNLFIEMCRANIS--------------ADQA-----------------TFASIL 383
           G +EEA + F EM   N+                D+                   FA  L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A + L +L  G+QLH+ ++  G+ S++  G+A++ MYAK G ++ A   F  MP  ++V
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SWN++I+A  Q+G     ++ F+ M++ G  PD ++ L+VL+ACSH GL+E+G  YFNSM
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            + Y + P ++HYA MVD+ CR+G F  A  ++  MP +P   +W +++  CRIH N++ 
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
             +AA+QLFK+    D   YV +SNIYA  G+W  V++V+K MR++ VRK  A SW+E++
Sbjct: 613 GIEAAEQLFKLMPQNDGT-YVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVE 671

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
           +KVHVF  +D++HP+   + R +E L  EMKK GY PDT   LHD + E K  +L  HSE
Sbjct: 672 NKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+ F ++  P G+ + V KN+R C DCH A K +SK+  REI VRD  RFHHFK+G C
Sbjct: 732 KLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDC 791

Query: 744 SCRDFW 749
           SCRD+W
Sbjct: 792 SCRDYW 797



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 260/561 (46%), Gaps = 81/561 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFK 58
           +PN + ++   LI+ Y   GNL   RE+FN   +  R +V +  +I GY+       A +
Sbjct: 74  IPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALE 133

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSI-LIICNSLVD 116
           LF  MR D    PD  TF ++LS          +  Q+H  ++K G   +   + N+L+ 
Sbjct: 134 LFRAMRRD-DFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLS 192

Query: 117 SYCK------IRCLDL--ARRVFKEMPQKDSVS--------------------------- 141
            Y K      I C  +  AR++F EMP++D ++                           
Sbjct: 193 VYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVEN 252

Query: 142 ----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
               +NA+I+G+   G  +EA+ L  +M+ LG +  D T+   +SA   +    +G+QVH
Sbjct: 253 LGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVH 312

Query: 198 AFVVKTNFVEN----VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------- 244
           A+++K     N    + V+NAL+ LY K++ V EARK+F  MP  + +++N         
Sbjct: 313 AYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372

Query: 245 ----------------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
                                 VMI+  A N    E LKLF++++   F+   F F+  L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +  +    L+ GRQ+H Q +     S + V N+++ MYAKCG  E A+ +F  +  +  V
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W +MI+A  Q G+  +A+ LF +M +  +  D+ TF ++L A +    +  G+   + +
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552

Query: 403 IRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQA 460
           + S G        + ++D++ ++G    A      MP +     W AL++ C  +G+   
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612

Query: 461 TLKSFEDMVQSGYQPDSVSLL 481
            +++ E + +   Q D   +L
Sbjct: 613 GIEAAEQLFKLMPQNDGTYVL 633


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/738 (35%), Positives = 421/738 (57%), Gaps = 9/738 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y   G+L  A  +F+ +    A+ W IL+   ++   F  +  LF  M + G  + D  T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYT 197

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F+ +    S   + +   Q+H  I+K G+     + NSLV  Y K + +D AR+VF EM 
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD---IAL 192
           ++D +S+N++I G+   GL E+ + +FV+M   G    +   A  +S   G AD   I+L
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISL 314

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VH+  VK  F       N LLD+YSK   +  A+ +F EM +   VSY  MI  YA 
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                E++KLF E++        +  + +L+  A    L  G+++H          ++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRAN 371
           +N+L+DMYAKCG  +EA+ +F+ +     + W  +I  Y +     EAL+LF + +    
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
            S D+ T A +L A A L++   G+++H +++R+G+ S+    ++L+DMYAK G+L  A 
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F ++  +++VSW  +I+    +G  +  +  F  M Q+G + D +S +S+L ACSH G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG ++FN M  + K+ P  EHYA +VD+L R+G   +A + +  MP  PD  +W ++
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +  CRIH +++ A+K A+++F++E   +   YV M+NIYA A +WE V +++K + +RG+
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEP-ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    SW+E+K +V++F A D  +P+T  I   +  +   M +EGY P T  AL D +E
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEE 793

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K E+L  HSE+LA+A  +I++  G  I V KNLR C DCH   K +SK+T REI +RD
Sbjct: 794 MEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRD 853

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFH FKDG CSCR FW
Sbjct: 854 SNRFHQFKDGHCSCRGFW 871



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 279/580 (48%), Gaps = 29/580 (5%)

Query: 1   MPNQNTVSTNMLISGYV--KSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREA 56
           + NQ  + + + +  YV     +L T  +  +S+   DR+       +  + +      A
Sbjct: 21  LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENA 80

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            KL       G  D D  T  ++L  C++  +  +  +V   I   G+     + + L  
Sbjct: 81  VKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL 137

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y     L  A RVF E+  + ++ +N L+   AK G    +I LF +M   G +   +T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           F+    +   L  +  G Q+H F++K+ F E   V N+L+  Y K+  V  ARK+F EM 
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD---LQI 293
           E D +S+N +I  Y  N   ++ L +F ++  +     +   +T++SV A   D   + +
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISL 314

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           GR +H+  +      E +  N+L+DMY+KCG  + AK +F  +S  S V +T+MI+ Y +
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
           +G   EA+ LF EM    IS D  T  ++L   A    L  GK++H ++  +    ++F 
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG- 472
            +AL+DMYAK GS+++A   F EM  ++I+SWN +I   ++N  A   L  F  +++   
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA-SMVDILCRSGCFDE 531
           + PD  ++  VL AC+     ++G +    + +      +  H A S+VD+  + G    
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL-- 550

Query: 532 AEKLMAQMPFE----PDEIMWSSVINSCRIHKNLEFAKKA 567
              L+A M F+     D + W+ +I    +H    F K+A
Sbjct: 551 ---LLAHMLFDDIASKDLVSWTVMIAGYGMHG---FGKEA 584



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 92/175 (52%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K G++  A  +F+ M  +  +SW  +IGGYS+     EA  LF  +  +  
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T A +L  C+     ++  ++H  I++ GY S   + NSLVD Y K   L LA 
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            +F ++  KD VS+  +I G+   G  +EAI LF +M+  G +  + +F + L A
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/713 (34%), Positives = 408/713 (57%), Gaps = 41/713 (5%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-EM 134
           F+++    +   T  +L ++H+ II  G +  +I    L+  Y   R    +  VF+   
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P  +   +N++I      GL  EA+ L+ E Q +  +P  +TF + ++A  GL D  + +
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA--- 251
            +H  V+   F  ++++ NAL+D+Y + + + +ARK+F EMP  D VS+N +I+ Y    
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 252 -WNEQ---YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            WNE    Y +S+KLF E+   +F       +++L    +  DL+ G+ +H   I +   
Sbjct: 196 YWNEALEIYYQSIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +   +N L++MYAKCG    ++E+F+ +    +V W +MI+ Y+Q G + ++L +F  M
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314

Query: 368 --------------------CR-----------ANISADQATFASILRASAELASLSLGK 396
                               C              ++ D AT  SIL   + LA+   GK
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           ++H  + + G  S+V  G+ L++MY+K GSL+++ Q FK M  +++V+W ALISAC   G
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 434

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
           + +  +++F +M  +G  PD V+ ++++ ACSH GL+EEGL YF+ M + YK+ P+ EHY
Sbjct: 435 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY 494

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           A +VD+L RS   D+AE  +  MP +PD  +W +++++CR+  + E A++ ++++ ++  
Sbjct: 495 ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP 554

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
             D   YV +SNIYA  G+W+ V  ++K+++ RG++K    SW+E+++KV+VF    +  
Sbjct: 555 -DDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFF 613

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
            Q  E+ + +  L   M KEGY  +    LHD DE+ K + L  HSERLAIAF L+NT  
Sbjct: 614 EQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKP 673

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G+P+ VMKNLR C DCH   K ISKI  RE+ VRD++RFH FKDG CSC D+W
Sbjct: 674 GTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 164/391 (41%), Gaps = 42/391 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF-------KLFVD 62
           N LI  Y +  +L  AR++F  M  R  VSW  LI GY+    + EA        KLF++
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD +T  ++L  C           VH  +I  GY       N L++ Y K  
Sbjct: 214 MVNQ--FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 271

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ---------------- 166
            L  ++ VF  M  KDSVS+N++I  + + G   +++K+F  M+                
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 167 ----HLGFK-----------PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               +LG +           P   T  + L     LA    G+++H  + K     +V V
Sbjct: 332 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            N L+++YSK   +  + ++F  M   D V++  +I+      + K++++ F E++    
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 272 DRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                 F  ++   ++   ++ G    H           ++    +VD+ ++    ++A+
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 331 EIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           +   ++     +  W A++SA    G+ E A
Sbjct: 512 DFILSMPLKPDSSIWGALLSACRMSGDTEIA 542



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 32/210 (15%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM- 63
           +T ++N+LI+ Y K GNL  ++E+F+ M  + +VSW  +I  Y Q  +  ++ K+F +M 
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315

Query: 64  ------------------------------RTDGGSDPDYVTFATLLSGCSEPDTANELI 93
                                         RT+G + PD  T  ++L  CS      +  
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT-PDMATMLSILPVCSLLAAKRQGK 374

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H  I K G  S + + N L++ Y K   L  + +VFK M  KD V++ ALI+     G
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 434

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             ++A++ F EM+  G  P    F A + A
Sbjct: 435 EGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 464



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 119/308 (38%), Gaps = 64/308 (20%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q  F+SI RA A  A+ +   +LHS +I  G   +V   + L+  YA       +   F+
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 436 -EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
              P  N+  WN++I A   NG     L  + +  +   QPD+ +  SV++AC+      
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA------ 126

Query: 495 EGLQYFNSMTQKYKLRPKKEHYAS-------MVDILCRSGCFDEAEKLMAQMP------- 540
            GL  F  M +    R     + S       ++D+ CR    D+A K+  +MP       
Sbjct: 127 -GLLDF-EMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184

Query: 541 ---------------------------------FEPDEIMWSSVINSCRIHKNLEFAKKA 567
                                            F+PD +  +S++ +C    +LEF K  
Sbjct: 185 NSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYV 244

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
            D +       D      + N+YA  G   +  +V   M+ +      + SW    S ++
Sbjct: 245 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK-----DSVSW---NSMIN 296

Query: 628 VFTANDEL 635
           V+  N ++
Sbjct: 297 VYIQNGKM 304


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/703 (37%), Positives = 399/703 (56%), Gaps = 4/703 (0%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           + ++    A   FV M +  G+ P   TF +LL  C+          VHA +   G +S 
Sbjct: 35  AARSDLPAALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSE 93

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
            +   +L + Y K R    ARRVF  MP +D V++NAL+ G+A+ GL   A+++ V MQ 
Sbjct: 94  ALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQE 153

Query: 168 L-GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G +P   T  + L A      +A  R+ HAF +++   E V VA A+LD Y K   + 
Sbjct: 154 EEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIR 213

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            AR +F  MP  + VS+N MI  YA N   +E+L LF  +     D +       L    
Sbjct: 214 AARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACG 273

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               L  G ++H   +     S V V N+L+ MY+KC R + A  +F  L   + V W A
Sbjct: 274 ELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNA 333

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI    Q G  E+A+ LF  M   N+  D  T  S++ A A+++     + +H + IR  
Sbjct: 334 MILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH 393

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              +V+  +AL+DMYAK G +  A   F    ER++++WNA+I     +G  +A ++ FE
Sbjct: 394 LDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFE 453

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           +M   G  P+  + LSVLSACSH GL++EG +YF SM + Y L P  EHY +MVD+L R+
Sbjct: 454 EMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRA 513

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  DEA   + +MP +P   ++ +++ +C++HKN+E A+++A ++F++   ++   +V +
Sbjct: 514 GKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGP-QEGVYHVLL 572

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           +NIYA A  W+ V++V+ AM + G++K   +S ++LK+++H F +    H Q  EI  ++
Sbjct: 573 ANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             L++E+K  GY PDT  ++HD ++++K + L  HSE+LAIAF LI T  G+ I + KNL
Sbjct: 633 AKLIEEIKAVGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNL 691

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH A KLIS +TGREI +RD  RFHHFKDG CSC D+W
Sbjct: 692 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 235/474 (49%), Gaps = 2/474 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +   ++   L + Y K    A AR +F+ M  R  V+W  L+ GY++    R A ++ V 
Sbjct: 91  DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  PD +T  ++L  C+         + HA  I+ G   ++ +  +++D+YCK  
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR VF  MP K+SVS+NA+I G+A+ G + EA+ LF  M   G   +D +  AAL 
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  G +VH  +V+     NV V NAL+ +YSK   V  A  +F E+     VS
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI   A N   +++++LF  +Q        F   +++  +A+  D    R IH  +I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 +V V  +L+DMYAKCGR   A+ +F +      + W AMI  Y   G  + A+ 
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF EM    I  ++ TF S+L A +    +  G++  + +    G    +     ++D+ 
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            ++G L +A    ++MP +  +  + A++ AC  + + +   +S + + + G Q
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQ 564



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 177/371 (47%), Gaps = 52/371 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N+VS N +I GY ++G+   A  LFN MV+                          
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE------------------------- 256

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                  G D   V+    L  C E    +E ++VH  +++ G +S + + N+L+  Y K
Sbjct: 257 -------GVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSK 309

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + +DLA  VF E+ ++  VS+NA+I G A+ G +E+A++LF  MQ    KP  FT  + 
Sbjct: 310 CKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSV 369

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + A   ++D    R +H + ++ +  ++V+V  AL+D+Y+K   V  AR LF    E   
Sbjct: 370 IPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV 429

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +++N MI  Y  +   K +++LF E++      ++  F ++LS  ++   +  GR+  T 
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTS 489

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                 +   ++   ++VD+  + G+ +EA              W     A++QK  ++ 
Sbjct: 490 MKEDYGLEPGMEHYGTMVDLLGRAGKLDEA--------------W-----AFIQKMPMDP 530

Query: 360 ALNLFIEMCRA 370
            L+++  M  A
Sbjct: 531 GLSVYGAMLGA 541



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 25/221 (11%)

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           A + A   + +L  AL  F+ M  A       TF S+L+  A    L+ G+ +H+ +   
Sbjct: 29  ARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAAR 88

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           G  S   + +AL +MYAK     DA + F  MP R+ V+WNAL++  A+NG A+  ++  
Sbjct: 89  GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148

Query: 466 EDMV-QSGYQPDSVSLLSVLSAC-----------SHCGLIEEGLQYFNSMTQKYKLRPKK 513
             M  + G +PDS++L+SVL AC           +H   I  GL+   ++          
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVA--------- 199

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               +++D  C+ G    A  +   MP + + + W+++I+ 
Sbjct: 200 ---TAILDAYCKCGDIRAARVVFDWMPTK-NSVSWNAMIDG 236


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/747 (35%), Positives = 423/747 (56%), Gaps = 13/747 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF----K 58
           +QN V +  LI+ YV  G+++ +R  F+ +  +   SW  +I  Y +  ++ EA     +
Sbjct: 51  SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           LF  M   G   PD+ TF  +L  C          +VH  + K G+   + +  SLV  Y
Sbjct: 111 LF-SMCGGGHLRPDFYTFPPILKACVSLVDGK---KVHCCVFKMGFEDDVFVAASLVHLY 166

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            +   LD+A +VF +MP KD  S+NA+I+GF + G    A+ +   M+  G K    T A
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L       D+  G  +H  V+K     +VFV+NAL+++YSK   + +A+ +F +M   
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VS+N +I  Y  N     +L+ F+ +Q            +L S+ +   D +I R I 
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSIL 346

Query: 299 TQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
              I    +  +V + N+LV+MYAK G    A  +F  L    T+ W  +++ Y Q G  
Sbjct: 347 GFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLA 406

Query: 358 EEALNLF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            EA++ +  +E CR  I  +Q T+ SI+ A + + +L  G ++H+ +I++    +VF  +
Sbjct: 407 SEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVAT 465

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            L+D+Y K G L+DA+  F E+P    V WNA+I++   +G  +  L+ F+DM+    + 
Sbjct: 466 CLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA 525

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D ++ +S+LSACSH GL++EG + F+ M ++Y ++P  +HY  MVD+L R+G  ++A +L
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MP +PD  +W +++++C+I+ N E    A+D+L +++   +   YV +SNIYA   +
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS-ENVGYYVLLSNIYANTEK 644

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           WE V +V+   R+RG+RK   +S V + SK  VF   ++ HP+  EI ++++ L  +MK 
Sbjct: 645 WEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKS 704

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY PD S    D +E+ K + L  HSERLAIAF +I+TP  SPI + KNLR C DCH A
Sbjct: 705 LGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNA 764

Query: 716 IKLISKITGREITVRDSSRFHHFKDGF 742
            K IS+I+ REI VRDS+RFHHFKDG 
Sbjct: 765 TKYISRISEREIVVRDSNRFHHFKDGI 791



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 189/393 (48%), Gaps = 11/393 (2%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +++HA ++     +N+ ++  L++LY  H  +  +R  F  + + +  S+N +I+ Y   
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 254 EQYKESL----KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            +Y E++    +LF            + F  +L    + +D   G+++H          +
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V VA SLV +Y++ G  + A ++F ++       W AMIS + Q GN   AL +   M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D  T ASIL   A+   +  G  +H  V++ G  S+VF  +AL++MY+K G L+D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F +M  R++VSWN++I+A  QN D    L+ F+ M   G +PD ++++S+ S  S 
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ 335

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
                        + ++  L        ++V++  + G  + A  +  Q+P   D I W+
Sbjct: 336 LSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWN 394

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           +++     +     A +A D    ME+ RD  P
Sbjct: 395 TLVTG---YTQNGLASEAIDAYNMMEECRDTIP 424



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 31/183 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++T+S N L++GY ++G  + A + +N M                   + R+     
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMM------------------EECRDTI--- 423

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     P+  T+ +++   S      + +++HA +IK      + +   L+D Y K
Sbjct: 424 ----------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK 473

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A  +F E+P+  SV +NA+I      G  EEA++LF +M     K    TF + 
Sbjct: 474 CGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSL 533

Query: 181 LSA 183
           LSA
Sbjct: 534 LSA 536


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/668 (35%), Positives = 402/668 (60%), Gaps = 6/668 (0%)

Query: 87  DTAN----ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
           DT N    ++I  H  I        ++  NSL++ Y K   + +AR +F  M +++ VS+
Sbjct: 37  DTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSW 96

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGF-KPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
            AL+ G+   GL  E ++LF  M  + + +P+++ FA  +S+      +  G Q H + +
Sbjct: 97  GALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYAL 156

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           K+  V + +V NAL+ +YS+   V  A  ++ E+P +D  SYN++I     N    E+L+
Sbjct: 157 KSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALE 216

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           +   +           + T   + ++  DL++G Q+H +   T A  +  V+++++DMY 
Sbjct: 217 VLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYG 276

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           KCG    A+++F  L   + V WTA+++AY Q G  EEALN F EM    +  ++ TFA 
Sbjct: 277 KCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAV 336

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L + A +++L  GK LH+ + +SGF  ++  G+AL++MY+KSGS++ A + F EM  R+
Sbjct: 337 LLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRD 396

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
            ++W+A+I   + +G  +  L  F++M+ +   P  V+ + VLSAC+H G ++EG  Y N
Sbjct: 397 SITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLN 456

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            + ++  + P  EHY  +V +LC++G  DEAE  M   P + D + W +++++C +H+N 
Sbjct: 457 QLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
              KK A+ + +M+   D   Y+ +SN+YA A +W+ V +++K MRER V+K    SW+E
Sbjct: 517 GLGKKVAELVLQMDP-GDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIE 575

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           +++ +HVF +  + HP++N+I  K++ L+  ++  GY PD +   HD ++E K E + YH
Sbjct: 576 IRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYH 635

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           SE+LAIA+ L+ TP G+PI V+KNLR C DCH+A+KLISK+T R I VRD++RFH F DG
Sbjct: 636 SEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDG 695

Query: 742 FCSCRDFW 749
            CSC D+W
Sbjct: 696 GCSCADYW 703



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 219/450 (48%), Gaps = 2/450 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V  N LI+ Y K   +  AR LF+ M  R  VSW  L+ GY       E  +LF  M 
Sbjct: 61  NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMI 120

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           +     P+   FAT++S CS+     E  Q H   +K G      + N+L+  Y +   +
Sbjct: 121 SVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDV 180

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  V+ E+P  D  S+N +I G  + G   EA+++   M        + T+  A    
Sbjct: 181 KGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLC 240

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+ LG QVH  + +T    + FV++A++D+Y K   ++ ARK+F  +   + VS+ 
Sbjct: 241 SHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWT 300

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++  Y+ N  ++E+L  F E++      +++ F+ LL+  A    L  G+ +HT+   +
Sbjct: 301 AILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKS 360

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V N+L++MY+K G  E A ++F  +    ++ W+AMI      G   EAL +F
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            EM  A       TF  +L A A L S+  G   L+  + ++G    V   + ++ +  K
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480

Query: 424 SGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           +G L +A    K  P + ++V+W  L+SAC
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSAC 510



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 166/358 (46%), Gaps = 36/358 (10%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKV--ANSLVDMYAKCGRFEEAKEIFANLSH 338
           LL V A+  +L+ G+ IH   I+T   ++  +   NSL+++YAKC +   A+ +F  +  
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQ 397
            + V W A+++ Y   G + E L LF  M   + +  ++  FA+I+ + ++   +  G Q
Sbjct: 91  RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
            H + ++SG + + +  +AL+ MY++   +K A+  + E+P  ++ S+N +I+   +NG 
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM-------------- 503
               L+  + MV      D+V+ ++    CSH   +  GLQ    M              
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270

Query: 504 -------------TQKYKLRPKKEHYASMVDILC---RSGCFDEAEKLMAQMPFE---PD 544
                         +K   R + ++  S   IL    ++GCF+EA     +M  +   P+
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPN 330

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           E  ++ ++NSC     L   K    ++ K           A+ N+Y+ +G  E+  +V
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 426/758 (56%), Gaps = 16/758 (2%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+ +    N L++ Y + G    AR L + M    AVS+ +LI  YS+  Q   + + F 
Sbjct: 45  PSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFA 102

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
             R   G   D  T+A  L+ CS      E   VHA  +  G    + + NSLV  Y + 
Sbjct: 103 RARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARC 162

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  AR+VF    ++D VS+NAL++G+ + G  ++ +++F  M+  G   + F   + +
Sbjct: 163 GDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVI 222

Query: 182 SAGVGLAD--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
               G  D  + +   VH  VVK  F  +VF+A+A++ +Y+K   + EA  LF  + + +
Sbjct: 223 KCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPN 282

Query: 240 GVSYNVMITCYAWNEQ------YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            V +N MI     +E        +E+L L+ E+Q    + ++F FS+++       D++ 
Sbjct: 283 VVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEF 342

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           G+QIH Q +      +  + ++L+D+Y   G  E+    F ++     V WTAMIS  VQ
Sbjct: 343 GKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQ 402

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               E AL LF E+  A +  D  T +S++ A A LA    G+Q+  F  +SGF      
Sbjct: 403 NELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAM 462

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G++ + MYA+SG +  A++ F+EM   +IVSW+A+IS+ AQ+G A+  L+ F +MV +  
Sbjct: 463 GNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKV 522

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ ++ L VL+ACSH GL++EGL+Y+ +M ++Y L P  +H   +VD+L R+G   +AE
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
             +    F  + ++W S++ SCRIH+++E  +  AD++ +++    +A YV + NIY  A
Sbjct: 583 AFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQP-SSSASYVNLYNIYLDA 641

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+    S+++  M+ERGV+K    SW+EL+S VH F A D+ HP++N I  K+  ++ ++
Sbjct: 642 GELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKI 701

Query: 654 KKEGYKPDTSCALHDEDEEIKVES--LKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            K      T  +    D+ I+ E   + +HSE+LA+A  LI+ P+ +PI VMKNLR C D
Sbjct: 702 DK---LTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRD 758

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH  +KLISK   REI +RD+ RFHHF+DG CSC D+W
Sbjct: 759 CHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 254/488 (52%), Gaps = 24/488 (4%)

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  CS P  A     VHA I++   +  L + N+L+ +YC++     ARR+  EMP+ ++
Sbjct: 24  LRSCSAPRHA---AAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNA 78

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           VSFN LI  +++ G  E +++ F   +   G +   FT+AAAL+A      +  G+ VHA
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
             V       VFV+N+L+ +Y++   + +AR++F    E D VS+N +++ Y       +
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSL 316
            L++F  ++ +    + F   +++   A   D  + I   +H   +     S+V +A+++
Sbjct: 199 MLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAM 258

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS------AYVQKGNLEEALNLFIEMCRA 370
           V MYAK G   EA  +F ++   + V + AMI+      A V    L EAL+L+ E+   
Sbjct: 259 VGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSR 318

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +   + TF+S++RA      +  GKQ+H  V++  F  + F GSAL+D+Y  SG ++D 
Sbjct: 319 GMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDG 378

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F  +P++++V+W A+IS C QN   +  L  F +++ +G +PD  ++ SV++AC+  
Sbjct: 379 FRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASL 438

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASM----VDILCRSGCFDEAEKLMAQMPFEPDEI 546
            +   G Q      Q +  +     + +M    + +  RSG    A +   +M    D +
Sbjct: 439 AVARTGEQ-----IQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEME-SHDIV 492

Query: 547 MWSSVINS 554
            WS+VI+S
Sbjct: 493 SWSAVISS 500


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/740 (34%), Positives = 423/740 (57%), Gaps = 9/740 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S +V+ G++  A  +F  M +R   SW +L+GGY++   F EA  L+  +    G 
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW-AGI 131

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--A 127
            PD  TF ++L  C+         +VHA +++F ++  + + N+L+  Y  ++C D+  A
Sbjct: 132 RPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMY--VKCGDVVSA 189

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R +F +MP +D +S+NA+I+G+ +     E ++LF  M+ L   P   T  + +SA   L
Sbjct: 190 RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D  LG Q+H++VV+T +  N+ V N+L+ +Y       EA  +F  M   D VS+  +I
Sbjct: 250 GDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTII 309

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +    N    ++L+ ++ ++ T     +   +++LS  A+   L +G ++H     T  I
Sbjct: 310 SGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHI 369

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V VANSL+DMY+KC R E+A EIF  +     + WT++I+         EAL  F +M
Sbjct: 370 LYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKM 429

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              +   +  T  S L A A + +L  GK++H+  +++G   + F  +A+LD+Y + G +
Sbjct: 430 ILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRM 488

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + A+  F  + E+++ +WN L++  AQ G     ++ F+ MV+S   PD V+ +S+L AC
Sbjct: 489 RTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCAC 547

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S  G++ EGL+YF  M   Y + P  +HYA +VD+L R+G  +EA + + +MP +PD  +
Sbjct: 548 SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI 607

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++N+CRIH+++   + AA  +FK +       Y+ + N+YA +G+W+ V++V++ M+
Sbjct: 608 WGALLNACRIHRHVLLGELAAQHIFKQDA-ESIGYYILLCNLYADSGKWDEVAKVRRTMK 666

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           E G+      SWVE+K KVH F + D  HPQ  EI   +E   ++MK  G+     C+  
Sbjct: 667 EEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFN-GQECSSM 725

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D  +  K +    HSER AIA++LIN+  G PI V KNL  C  CH+ +K ISKI  REI
Sbjct: 726 DGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREI 785

Query: 728 TVRDSSRFHHFKDGFCSCRD 747
           +VRD+ +FHHFKDG CSC D
Sbjct: 786 SVRDTEQFHHFKDGLCSCGD 805



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 192/396 (48%), Gaps = 33/396 (8%)

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G+   ++ + A LS+ V L  + LG                   NALL ++ +   V  A
Sbjct: 48  GYSEGEYVWKAVLSSLVTLLSVRLG-------------------NALLSMFVRFGDVGNA 88

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
             +FG M E D  S+NV++  Y     + E+L L+  + +       + F ++L   A  
Sbjct: 89  WNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGA 148

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
           +DL  GR++H   +      +V V N+L+ MY KCG    A+ +F  +     + W AMI
Sbjct: 149 MDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMI 208

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           S Y +     E L LF  M   +I  D  T  S++ A   L    LG QLHS+V+R+ + 
Sbjct: 209 SGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYD 268

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            N+   ++L+ MY   G  K+A   F  M  R++VSW  +IS C  N      L++++ M
Sbjct: 269 GNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTM 328

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA------SMVDI 522
             +G  PD V++ SVLSAC+  G ++ G++        ++L  +  H        S++D+
Sbjct: 329 EITGTMPDEVTIASVLSACASLGQLDMGMKL-------HELAERTGHILYVVVANSLIDM 381

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
             +    ++A ++  Q+P + D I W+SVIN  RI+
Sbjct: 382 YSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRIN 416



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 3/178 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N LI  Y K   +  A E+F+ + D+  +SWT +I G    N+  EA   F  M  
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMIL 431

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
              S P+ VT  + LS C+         ++HA  +K G      + N+++D Y +   + 
Sbjct: 432 K--SKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMR 489

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            A   F  + +KD  ++N L+TG+A++G     ++LF  M      P D TF + L A
Sbjct: 490 TALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/744 (36%), Positives = 414/744 (55%), Gaps = 58/744 (7%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +S N LI+ Y + G +  AR +F+ M D+  +SW  ++ GY Q  + +EA  +F  M   
Sbjct: 99  ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM--- 155

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
                            SE +T                    I  N LV  Y     ++ 
Sbjct: 156 -----------------SERNT--------------------ISWNGLVSGYINNGMINE 178

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP+++ VS+ A++ G+ KEG+  EA  LF +M      P     +  +  G  
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM------PEKNVVSWTVMLGGL 232

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L +  +      F +     ++V     ++  Y +   +VEAR LF EMP  + VS+  M
Sbjct: 233 LQEGRIDEACRLFDMMPE--KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTM 290

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT Y  N+Q   + KLF  +     ++++  ++ +L    N   L    ++         
Sbjct: 291 ITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFN----AMP 342

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           I  V   N+++  + + G   +A+++F  +       W+AMI  Y +KG   +AL LF  
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRM 402

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  I  +  +  S+L   A LA+L  G+++H+ ++RS F  +V+  S LL MY K G+
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  A Q F     +++V WN++I+  AQ+G     L+ F DM  SG  PD V+ + VLSA
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS+ G +++GL+ FNSM  KY++  K EHYA MVD+L R+G  +EA  L+ +MP E D I
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +CR H  L+ A+ AA +L  +E  ++A P++ +SNIYA  G+W+ V+++++ M
Sbjct: 583 IWGALLGACRTHMKLDLAEVAAKKLLVLEP-KNAGPFILLSNIYASQGRWDDVAELRRNM 641

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           R+R V K    SW+ ++ KVH FT  D   HP+ +EI R +E L   +++ GY PD S  
Sbjct: 642 RDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFV 701

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD DEE KV+SL+YHSE+LA+A+ L+  P G PI VMKNLR C DCHAAIKLI+K+TGR
Sbjct: 702 LHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGR 761

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD++RFHHFKDG CSCRD+W
Sbjct: 762 EIILRDANRFHHFKDGSCSCRDYW 785



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 237/456 (51%), Gaps = 23/456 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +NT+S N L+SGY+ +G +  ARE+F+ M +R  VSWT ++ GY ++    EA  LF
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +    +E  ++  D++       ++   +++  YC+
Sbjct: 215 WQM-----PEKNVVSWTVMLGGLLQEGRIDEACRLF-DMMP---EKDVVTRTNMIGGYCQ 265

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  L  AR +F EMP+++ VS+  +ITG+ +    + A KLF  M     + ++ ++ A 
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAM 321

Query: 181 LSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L        +    ++ +A  +K+     V   NA++  + ++  V +AR++F +M E D
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIH 298
             +++ MI  Y       ++L+LFR +Q     R  FP   ++LSV A   +L  GR+IH
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGI-RPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q + +    +V VA+ L+ MY KCG   +AK++F   +    V W ++I+ Y Q G   
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSAL 417
           EAL +F +M  + I  D  TF  +L A +   ++  G ++ +S   +      +   + +
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +D+  ++G L +A+   ++MP E + + W AL+ AC
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGAC 591



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 32/288 (11%)

Query: 391 SLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           S+  G      V+   + SN + S ++L+  Y++ G ++ A   F EM ++NI+SWN+++
Sbjct: 77  SMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIV 136

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +   QN   Q     F+ M +     +++S   ++S   + G+I E  + F+ M ++  +
Sbjct: 137 AGYFQNKRPQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVV 192

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
                 + +MV    + G   EAE L  QMP E + + W+ ++        ++     A 
Sbjct: 193 -----SWTAMVRGYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EAC 242

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +LF M   +D      M   Y   G+      +   M  R V      SW  +   +  +
Sbjct: 243 RLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV-----VSWTTM---ITGY 294

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGY----KPDTSCALHDEDEEI 673
             N ++     +I RK+  +M E  +  +    K  T+C   DE  E+
Sbjct: 295 VQNQQV-----DIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/712 (37%), Positives = 405/712 (56%), Gaps = 48/712 (6%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC---LDLARRVFKEM 134
           TLLS C    T   L Q+H+ IIK G ++     + L++ +C +     L  A  +FK +
Sbjct: 33  TLLSNCK---TLQTLKQIHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYALSLFKTI 88

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
              + V +N +I G +       A++ +V M   G +P+++TF +   +   +     G+
Sbjct: 89  RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVV---------------------------- 226
           QVHA V+K     N FV  +L+++Y+++  +V                            
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208

Query: 227 ---EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
              EAR+LF E+P  D VS+N MI+ YA + + +E++  F E++  +   +    ST+LS
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN---VSTMLS 265

Query: 284 VVA----NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           V++    +   LQ+G  + +        S +++ N L+DMY KCG  EEA  +F  +   
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
           + V W  MI  Y      +EAL LF  M ++NI  +  TF SIL A A L +L LGK +H
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385

Query: 400 SFVIRS--GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           ++V ++     + V   ++L+DMYAK G L  A + F  M  +++ +WNA+IS  A +G 
Sbjct: 386 AYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGH 445

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
               L  F  M   G+ PD ++ + VL+AC H GL+  G +YF+SM Q YK+ PK  HY 
Sbjct: 446 TDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYG 505

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            M+D+  R+G FDEAE L+  M  +PD  +W S++ +CRIH+ +E A+  A  LF++E  
Sbjct: 506 CMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEP- 564

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            + + YV +SNIYA AG+WE V++++  + +  ++KV   S +E+ S VH F   D++HP
Sbjct: 565 ENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHP 624

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
           Q+NEI + ++ +   ++K G+ PDTS  L+D DEE K   L +HSE+LAIAF LI+T  G
Sbjct: 625 QSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPG 684

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + I +MKNLR C +CH+A KLISKI  REI  RD +RFHHFKDG CSC+D+W
Sbjct: 685 TTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 221/471 (46%), Gaps = 41/471 (8%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G+L+ A  LF ++ +   V W  +I G S       A + +V M    G++P+  TF ++
Sbjct: 76  GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHM-ISSGTEPNEYTFPSI 134

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
              C++   A+E  QVHA ++K G      +  SL++ Y +   L  AR VF +   +D+
Sbjct: 135 FKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDA 194

Query: 140 VSFNALITGFAKEGL-------------------------------NEEAIKLFVEMQHL 168
           VSF ALITG+A +G                                 EEA+  F EM+  
Sbjct: 195 VSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA 254

Query: 169 GFKPSDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
              P+  T  + LSA     + + LG  V +++       N+ + N L+D+Y K   + E
Sbjct: 255 KVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEE 314

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A  LF ++ + + VS+NVMI  Y     YKE+L LFR +  +  D +   F ++L   AN
Sbjct: 315 ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACAN 374

Query: 288 KLDLQIGRQIH--TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
              L +G+ +H      + +  + V +  SL+DMYAKCG    AK IF  ++  S   W 
Sbjct: 375 LGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWN 434

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           AMIS +   G+ + AL LF  M       D  TF  +L A      LSLG++  S +I+ 
Sbjct: 435 AMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD 494

Query: 406 GFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISAC 452
             +S        ++D++ ++G   +A    K M   P+  I  W +L+ AC
Sbjct: 495 YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI--WCSLLGAC 543



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 170/337 (50%), Gaps = 5/337 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS   LI+GY   G L  ARELF+ +  R  VSW  +I GY+Q  +  EA   F +M
Sbjct: 192 RDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIR 122
           R      P+  T  ++LS C++  ++ +L   V + I   G  S + + N L+D Y K  
Sbjct: 252 RR-AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCG 310

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A  +F+++  K+ VS+N +I G+      +EA+ LF  M      P+D TF + L 
Sbjct: 311 DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILP 370

Query: 183 AGVGLADIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  + LG+ VHA+V K   +    V +  +L+D+Y+K   +  A+++F  M     
Sbjct: 371 ACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSL 430

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++N MI+ +A +     +L LF  +    F      F  +L+   +   L +GR+  + 
Sbjct: 431 ATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSS 490

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANL 336
            I    +S ++     ++D++ + G F+EA+ +  N+
Sbjct: 491 MIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNM 527



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 41/328 (12%)

Query: 266 LQFTRFDRSQFPFSTL-----LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDM 319
           LQ   F     P+  +     L++++N   LQ  +QIH+Q I+ T +     A S L++ 
Sbjct: 11  LQVLSFSDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQ-IIKTGLHNTHFALSKLIEF 69

Query: 320 YA--KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            A    G    A  +F  + + + V W  MI       +   AL  ++ M  +    ++ 
Sbjct: 70  CAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEY 129

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG------------ 425
           TF SI ++  ++     GKQ+H+ V++ G   N F  ++L++MYA++G            
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189

Query: 426 SLKDAI-------------------QTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           S++DA+                   + F E+P R++VSWNA+IS  AQ+G  +  +  FE
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFE 249

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           +M ++   P+  ++LSVLSAC+  G   +   +  S  +   L         ++D+  + 
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           G  +EA  L  ++  + + + W+ +I  
Sbjct: 310 GDLEEASNLFEKIQ-DKNVVSWNVMIGG 336


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/675 (37%), Positives = 383/675 (56%), Gaps = 34/675 (5%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-- 165
           L+  NSL+ +  +   +    R+F  +PQ+D+VS+NAL+ GF++ G +  A   +V +  
Sbjct: 77  LVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLR 136

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
              G +PS  T +  +     L D ALGRQVH  +++  F    F  + L+D+Y+K   +
Sbjct: 137 DEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPI 196

Query: 226 VEARKLFGEMP-------------------------------EVDGVSYNVMITCYAWNE 254
            +AR++F EM                                E D +++  M+T    N 
Sbjct: 197 GDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNG 256

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L +FR ++       Q+ F ++L+       L+ G+QIH     T     V V +
Sbjct: 257 LESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGS 316

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +LVDMY+KC     A+ +F  +   + + WTAMI  Y Q G  EEA+ +F EM R  I  
Sbjct: 317 ALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKP 376

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  S++ + A LASL  G Q H   + SG    V   +AL+ +Y K GS++DA + F
Sbjct: 377 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLF 436

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EM   + VSW AL+   AQ G A+ T+  FE M+  G +PD V+ + VLSACS  GL++
Sbjct: 437 DEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVD 496

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +G  YF+SM Q + + P  +HY  M+D+  RSG   +AE+ + QMP  PD   W++++++
Sbjct: 497 KGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR+  ++E  K AA+ L K++  ++ A YV + +++A  G+W  V+++++ MR+R V+K 
Sbjct: 557 CRLRGDMEIGKWAAENLLKLDP-QNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKE 615

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              SW++ K+KVH+F+A+D+ HP +  I  K++ L  +M +EGYKPD S  LHD  +  K
Sbjct: 616 PGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEK 675

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
           V  L +HSE+LAIAF LI  P   PI ++KNLR C DCH A K ISKITGR+I VRD+ R
Sbjct: 676 VHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVR 735

Query: 735 FHHFKDGFCSCRDFW 749
           FH F +G CSC DFW
Sbjct: 736 FHKFSNGICSCGDFW 750



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 253/521 (48%), Gaps = 35/521 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N V+ N L+S   ++G +     LF S+  R AVS+  L+ G+S+      A   +
Sbjct: 72  MPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAY 131

Query: 61  VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           V + R + G  P  +T + ++   S         QVH  I++ G+ +     + LVD Y 
Sbjct: 132 VALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191

Query: 120 KIRCLDLARRVFKEM-------------------------------PQKDSVSFNALITG 148
           K+  +  ARRVF EM                                ++DS+++  ++TG
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
             + GL  EA+ +F  M+  G     +TF + L+A   LA +  G+Q+HA++ +T + +N
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDN 311

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           VFV +AL+D+YSK   V  A  +F  M   + +S+  MI  Y  N   +E++++F E+Q 
Sbjct: 312 VFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                  F   +++S  AN   L+ G Q H   +V+     V V+N+LV +Y KCG  E+
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIED 431

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  +S    V WTA++  Y Q G  +E ++LF +M    +  D  TF  +L A + 
Sbjct: 432 AHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSR 491

Query: 389 LASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWN 446
              +  G+   HS       +      + ++D+Y++SG LK A +  K+MP   +   W 
Sbjct: 492 SGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWA 551

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
            L+SAC   GD +    + E++++   Q P S  LL  + A
Sbjct: 552 TLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHA 592



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 394 LGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
           L   +H+ ++R+    S  +  + LL  YA SG L  A + F  MP RN+V+ N+L+SA 
Sbjct: 28  LTAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSAL 87

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           A+ G     ++  E +  S  Q D+VS  ++L+  S
Sbjct: 88  ARAG----LVRDMERLFTSLPQRDAVSYNALLAGFS 119


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/744 (36%), Positives = 414/744 (55%), Gaps = 58/744 (7%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +S N LI+ Y + G +  AR +F+ M D+  +SW  ++ GY Q  + +EA  +F  M   
Sbjct: 99  ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM--- 155

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
                            SE +T                    I  N LV  Y     ++ 
Sbjct: 156 -----------------SERNT--------------------ISWNGLVSGYINNGMINE 178

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP+++ VS+ A++ G+ KEG+  EA  LF +M      P     +  +  G  
Sbjct: 179 AREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM------PEKNVVSWTVMLGGL 232

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L +  +      F +     ++V     ++  Y +   +VEAR LF EMP  + VS+  M
Sbjct: 233 LQEGRIDEACRLFDMMPE--KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTM 290

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT Y  N+Q   + KLF  +     ++++  ++ +L    N   L    ++         
Sbjct: 291 ITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYTNCGRLDEASELFN----AMP 342

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           I  V   N+++  + + G   +A+++F  +       W+AMI  Y +KG   +AL LF  
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRM 402

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  I  +  +  S+L   A LA+L  G+++H+ ++RS F  +V+  S LL MY K G+
Sbjct: 403 MQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  A Q F     +++V WN++I+  AQ+G     L+ F DM  SG  PD V+ + VLSA
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS+ G +++GL+ FNSM  KY++  K EHYA MVD+L R+G  +EA  L+ +MP E D I
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +CR H  L+ A+ AA +L  +E  ++A P++ +SNIYA  G+W+ V+++++ M
Sbjct: 583 IWGALLGACRTHMKLDLAEVAAKKLLVLEP-KNAGPFILLSNIYASQGRWDDVAELRRNM 641

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           R+R V K    SW+ ++ KVH FT  D   HP+ +EI R +E L   +++ GY PD S  
Sbjct: 642 RDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFV 701

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD DEE KV+SL+YHSE+LA+A+ L+  P G PI VMKNLR C DCHAAIKLI+K+TGR
Sbjct: 702 LHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGR 761

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD++RFHHFKDG CSCRD+W
Sbjct: 762 EIILRDANRFHHFKDGSCSCRDYW 785



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 237/456 (51%), Gaps = 23/456 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +NT+S N L+SGY+ +G +  ARE+F+ M +R  VSWT ++ GY ++    EA  LF
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +    +E  ++  D++       ++   +++  YC+
Sbjct: 215 WQM-----PEKNVVSWTVMLGGLLQEGRIDEACRLF-DMMP---EKDVVTRTNMIGGYCQ 265

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  L  AR +F EMP+++ VS+  +ITG+ +    + A KLF  M     + ++ ++ A 
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAM 321

Query: 181 LSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L        +    ++ +A  +K+     V   NA++  + ++  V +AR++F +M E D
Sbjct: 322 LKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPKARQVFDQMREKD 376

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIH 298
             +++ MI  Y       ++L+LFR +Q     R  FP   ++LSV A   +L  GR+IH
Sbjct: 377 EGTWSAMIKVYERKGLELDALELFRMMQREGI-RPNFPSLISVLSVCAGLANLDHGREIH 435

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q + +    +V VA+ L+ MY KCG   +AK++F   +    V W ++I+ Y Q G   
Sbjct: 436 AQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGV 495

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSAL 417
           EAL +F +M  + I  D  TF  +L A +   ++  G ++ +S   +      +   + +
Sbjct: 496 EALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACM 555

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +D+  ++G L +A+   ++MP E + + W AL+ AC
Sbjct: 556 VDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGAC 591



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 32/288 (11%)

Query: 391 SLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           S+  G      V+   + SN + S ++L+  Y++ G ++ A   F EM ++NI+SWN+++
Sbjct: 77  SMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIV 136

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +   QN   Q     F+ M +     +++S   ++S   + G+I E  + F+ M ++  +
Sbjct: 137 AGYFQNKRPQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVV 192

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
                 + +MV    + G   EAE L  QMP E + + W+ ++        ++     A 
Sbjct: 193 -----SWTAMVRGYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EAC 242

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +LF M   +D      M   Y   G+      +   M  R V      SW  +   +  +
Sbjct: 243 RLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV-----VSWTTM---ITGY 294

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGY----KPDTSCALHDEDEEI 673
             N ++     +I RK+  +M E  +  +    K  T+C   DE  E+
Sbjct: 295 VQNQQV-----DIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/733 (36%), Positives = 414/733 (56%), Gaps = 9/733 (1%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G +  AR++F S+       + +L+ G+S       +  +F  +R      P+  T+A  
Sbjct: 66  GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125

Query: 80  LSGCS--EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           +S  S    D A  +I  H   +  G +S L++ +++V  Y K   ++ AR+VF  MP+K
Sbjct: 126 ISAASGFRDDRAGRVI--HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT-FAAALSAGVGLADIALGRQV 196
           D++ +N +I+G+ K  +  E+I++F ++ +      D T     L A   L ++ LG Q+
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H+   KT    + +V    + LYSK   +     LF E  + D V+YN MI  Y  N + 
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           + SL LF+EL  +    ++   STL+S+V     L +   IH   + +  +S   V+ +L
Sbjct: 304 ELSLSLFKELMLSG---ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTAL 360

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
             +Y+K    E A+++F      S   W AMIS Y Q G  E+A++LF EM ++  S + 
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T   IL A A+L +LSLGK +H  V  + F S+++  +AL+ MYAK GS+ +A + F  
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M ++N V+WN +IS    +G  Q  L  F +M+ SG  P  V+ L VL ACSH GL++EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            + FNSM  +Y   P  +HYA MVDIL R+G    A + +  M  EP   +W +++ +CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IHK+   A+  +++LF+++   +   +V +SNI++    +   + V++  ++R + K   
Sbjct: 601 IHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
           Y+ +E+    HVFT+ D+ HPQ  EI  K+E L  +M++ GY+P+T  ALHD +EE +  
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            +K HSERLAIAF LI T  G+ I ++KNLR C DCH   KLISKIT R I VRD++RFH
Sbjct: 720 MVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 779

Query: 737 HFKDGFCSCRDFW 749
           HFKDG CSC D+W
Sbjct: 780 HFKDGVCSCGDYW 792



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 233/473 (49%), Gaps = 11/473 (2%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           + L Q HA II  G+ + + +   L      +  +  AR +F  + + D   FN L+ GF
Sbjct: 34  SHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93

Query: 150 AKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +       ++ +F  ++     KP+  T+A A+SA  G  D   GR +H   V       
Sbjct: 94  SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-- 266
           + + + ++ +Y K   V +ARK+F  MPE D + +N MI+ Y  NE Y ES+++FR+L  
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213

Query: 267 -QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
              TR D +      +L  VA   +L++G QIH+    T   S   V    + +Y+KCG+
Sbjct: 214 ESCTRLDTTT--LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            +    +F        V + AMI  Y   G  E +L+LF E+  +      +T  S++  
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           S  L    L   +H + ++S F+S+    +AL  +Y+K   ++ A + F E PE+++ SW
Sbjct: 332 SGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           NA+IS   QNG  +  +  F +M +S + P+ V++  +LSAC+  G +  G ++ + + +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVR 447

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                       +++ +  + G   EA +L   M  + +E+ W+++I+   +H
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 7/476 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++  Y K   +  AR++F+ M ++  + W  +I GY +   + E+ ++F D+  +  +  
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   +L   +E       +Q+H+   K G  S   +    +  Y K   + +   +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +E  + D V++NA+I G+   G  E ++ LF E+   G +    T  + +        + 
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLM 336

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           L   +H + +K+NF+ +  V+ AL  +YSK + +  ARKLF E PE    S+N MI+ Y 
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   ++++ LFRE+Q + F  +    + +LS  A    L +G+ +H     T   S + 
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+ +L+ MYAKCG   EA+ +F  ++  + V W  MIS Y   G  +EALN+F EM  + 
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516

Query: 372 ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           I+    TF  +L A +    +  G ++ +S + R GF  +V   + ++D+  ++G L+ A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576

Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           +Q  + M  E     W  L+ AC  + D        E + +    PD+V    +LS
Sbjct: 577 LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/793 (34%), Positives = 429/793 (54%), Gaps = 56/793 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           T+ LIS Y+  G L+ A  L       D     W  LI  Y    +  +    F  M + 
Sbjct: 62  TSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSL 121

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
             + PD  TF  +   C E  +       HA     G+ S + + N+LV  Y +   L  
Sbjct: 122 SWT-PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGV 185
           AR+VF EMP  D VS+N++I  +AK G  + A+++F +M +  GF+P D T    L    
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            +   +LG+Q H F V +  ++N+FV N L+D+Y+K   + EA  +F  MP  D VS+N 
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA------------------- 286
           M+  Y+   +++++++LF ++Q  +       +S  +S  A                   
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 287 ---NKLDL--------QIGRQIHTQTIVTTAI------------SEVKVANSLVDMYAKC 323
              N++ L         +G  +H + I   AI             E  V N L+DMYAKC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420

Query: 324 GRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEM----CRANISADQA 377
            + + A+ +F +LS      V WT MI  Y Q G+  +AL L  EM    C+   +A   
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA--F 478

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKE 436
           T +  L A A LA+LS+GKQ+H++ +R+   +  +F  + L+DMYAK G + DA   F  
Sbjct: 479 TISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDN 538

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M E+N V+W +L++    +G  +  L  FE+M + G++ D V+LL VL ACSH G+I++G
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           ++YFN M   + + P  EHYA +VD+L R+G  + A +L+ +MP EP  ++W ++++ CR
Sbjct: 599 MEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCR 658

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IH  +E  + AA ++ ++    D + Y  +SN+YA AG+W+ V++++  MR +G++K   
Sbjct: 659 IHGKVELGEYAAKKITELASNNDGS-YTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPG 717

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            SWVE       F   D+ HP   EI + + + MQ +K  GY P+T  ALHD D+E K +
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDD 777

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            L  HSE+LA+A+ ++ TP+G+ I + KNLR C DCH A   +S+I   EI +RDSSRFH
Sbjct: 778 LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFH 837

Query: 737 HFKDGFCSCRDFW 749
           HFK+G CSC+ +W
Sbjct: 838 HFKNGLCSCKGYW 850



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 234/504 (46%), Gaps = 49/504 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L++ Y + G+L+ AR++F+ M     VSW  +I  Y++  + + A ++F  M 
Sbjct: 161 NVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMT 220

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD +T   +L  C+   T +   Q H   +       + + N LVD Y K   +
Sbjct: 221 NEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMM 280

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----------------- 167
           D A  VF  MP KD VS+NA++ G+++ G  E+A++LF +MQ                  
Sbjct: 281 DEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGY 340

Query: 168 ------------------LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV-------K 202
                              G KP++ T  + LS    +  +  G+++H + +       K
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRK 400

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKESL 260
               +   V N L+D+Y+K   V  AR +F  +   E D V++ VMI  Y+ +    ++L
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460

Query: 261 KLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLV 317
           +L  E+  +  +   + F  S  L   A+   L IG+QIH   +     +  + V+N L+
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLI 520

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMYAKCG   +A+ +F N+   + V WT++++ Y   G  EEAL +F EM R     D  
Sbjct: 521 DMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGV 580

Query: 378 TFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           T   +L A +    +  G +  +      G        + L+D+  ++G L  A++  +E
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640

Query: 437 MP-ERNIVSWNALISACAQNGDAQ 459
           MP E   V W AL+S C  +G  +
Sbjct: 641 MPMEPPPVVWVALLSCCRIHGKVE 664



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 241/526 (45%), Gaps = 63/526 (11%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS--VSFNAL 145
           T +++  +H  ++ FG  + L + + L+ +Y  + CL  A  + +  P  D+    +N+L
Sbjct: 40  TISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSL 98

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I  +   G   + +  F  M  L + P ++TF     A   ++ +  G   HA    T F
Sbjct: 99  IRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGF 158

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
           + NVFV NAL+ +YS+   + +ARK+F EMP  D VS+N +I  YA   + K +L++F +
Sbjct: 159 MSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSK 218

Query: 266 L--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           +  +F  F         +L   A+     +G+Q H   + +  I  + V N LVDMYAK 
Sbjct: 219 MTNEFG-FRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF 277

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM---------------- 367
           G  +EA  +F+N+     V W AM++ Y Q G  E+A+ LF +M                
Sbjct: 278 GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI 337

Query: 368 ---------------CR----ANISADQATFASILRASAELASLSLGKQLHSFVI----- 403
                          CR    + I  ++ T  S+L   A + +L  GK++H + I     
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397

Query: 404 --RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQ 459
             ++G        + L+DMYAK   +  A   F  +   ER++V+W  +I   +Q+GDA 
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457

Query: 460 ATLKSFEDMVQSGYQ--PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             L+   +M +   Q  P++ ++   L AC+    +  G Q        Y LR ++    
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQ-----IHAYALRNQQNAVP 512

Query: 518 -----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                 ++D+  + G   +A  +   M  E +E+ W+S++    +H
Sbjct: 513 LFVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMH 557



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 212/461 (45%), Gaps = 57/461 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP ++ VS N +++GY + G    A  LF  M    +    V+W+  I GY+Q+    EA
Sbjct: 290 MPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-------GYNSILI 109
             +   M + G   P+ VT  ++LSGC+         ++H   IK+       G+    +
Sbjct: 350 LGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENM 408

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEM-- 165
           + N L+D Y K + +D+AR +F  +   ++D V++  +I G+++ G   +A++L  EM  
Sbjct: 409 VINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHD 223
           +    +P+ FT + AL A   LA +++G+Q+HA+ ++   N V  +FV+N L+D+Y+K  
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCG 527

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            + +AR +F  M E + V++  ++T Y  +   +E+L +F E++   F         +L 
Sbjct: 528 DIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLY 587

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HIST 341
             ++   +  G +   +      +S      + LVD+  + GR   A  +   +      
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V W A++S                  CR +   +   +A+  +   ELAS          
Sbjct: 648 VVWVALLSC-----------------CRIHGKVELGEYAA--KKITELAS---------- 678

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                  +N  S + L +MYA +G  KD  +    M  + I
Sbjct: 679 -------NNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGI 712



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 10/348 (2%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYV 352
           + IH Q +++  I  + + + L+  Y   G    A  +      S      W ++I +Y 
Sbjct: 45  KLIH-QKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G   + L+ F  M   + + D  TF  + +A  E++S+  G   H+    +GFMSNVF
Sbjct: 104 NNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVF 163

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS- 471
            G+AL+ MY++ GSL DA + F EMP  ++VSWN++I + A+ G  +  L+ F  M    
Sbjct: 164 VGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEF 223

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G++PD ++L++VL  C+  G    G Q F+      ++         +VD+  + G  DE
Sbjct: 224 GFRPDDITLVNVLPPCASVGTRSLGKQ-FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDE 282

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR-DAAPYVAMSNIY 590
           A  + + MP + D + W++++         E A +  +Q+ + EK++ D   + A  + Y
Sbjct: 283 ANTVFSNMPVK-DVVSWNAMVAGYSQIGRFEDAVRLFEQM-QEEKIKMDVVTWSAAISGY 340

Query: 591 AVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFTANDELH 636
           A  G       V + M   G++  +VT  S +   + V       E+H
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/760 (34%), Positives = 415/760 (54%), Gaps = 110/760 (14%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ------------------ 136
           VH +II FG+     I N L+D YCK   L+ AR++F E+ +                  
Sbjct: 36  VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 137 ---------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                          +D+V +NA+ITGF+       AI LF +M+H GFKP +FTFA+ L
Sbjct: 96  ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155

Query: 182 SAGVGLADIALGR----QVHAFVVKTNFVENVFVANALLDLYSK----HDCVVEARKLFG 233
           +   GLA +A       Q HA  +K+       V+NAL+ +YSK       +  ARK+F 
Sbjct: 156 A---GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212

Query: 234 EMPEVDG--------------------------------VSYNVMITCYAWNEQYKESLK 261
           E+ E D                                 V+YN MI+ Y     Y+E+L+
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           + R +  +  +  +F + +++   A    LQ+G+Q+H   +     S     NSLV +Y 
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYY 331

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL------------------------ 357
           KCG+F+EA+ IF  +     V W A++S YV  G++                        
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391

Query: 358 -------EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
                  EE L LF  M R         F+  +++ A L +   G+Q H+ +++ GF S+
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           + +G+AL+ MYAK G +++A Q F+ MP  + VSWNALI+A  Q+G     +  +E+M++
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G +PD ++LL+VL+ACSH GL+++G +YF+SM   Y++ P  +HYA ++D+LCRSG F 
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           +AE ++  +PF+P   +W ++++ CR+H N+E    AAD+LF +    D   Y+ +SN++
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT-YMLLSNMH 630

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           A  GQWE V++V+K MR+RGV+K  A SW+E++++VH F  +D  HP+   +   +++L 
Sbjct: 631 AATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLG 690

Query: 651 QEMKKEGYKPDTSCALHD-EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
           +EM++ GY PDTS  LHD E +  K + L  HSE++A+AF L+  P G+ I + KNLR C
Sbjct: 691 KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH   + +S +  R+I +RD  RFHHF++G CSC +FW
Sbjct: 751 GDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 238/527 (45%), Gaps = 74/527 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + ++   ++SGY  SG++  AR +F    +  R  V +  +I G+S  N    A  LF  
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 63  MRTDGGSDPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M+ +G   PD  TFA++L+G +   D   + +Q HA  +K G   I  + N+LV  Y K 
Sbjct: 139 MKHEG-FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197

Query: 122 ----RCLDLARRVFKEMPQKDS--------------------------------VSFNAL 145
                 L  AR+VF E+ +KD                                 V++NA+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I+G+   G  +EA+++   M   G +  +FT+ + + A      + LG+QVHA+V++   
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------------------- 244
               F  N+L+ LY K     EAR +F +MP  D VS+N                     
Sbjct: 318 FSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376

Query: 245 ----------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
                     +MI+  A N   +E LKLF  ++   F+   + FS  +   A       G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           +Q H Q +     S +   N+L+ MYAKCG  EEA+++F  +  + +V W A+I+A  Q 
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFS 413
           G+  EA++++ EM +  I  D+ T  ++L A +    +  G++   S             
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
            + L+D+  +SG   DA    + +P +     W AL+S C  +G+ +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 204/486 (41%), Gaps = 106/486 (21%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS------- 242
           + L R VH  ++   F     + N L+D+Y K   +  AR+LF E+ E D ++       
Sbjct: 30  LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89

Query: 243 --------------------------YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
                                     YN MIT ++ N     ++ LF +++   F    F
Sbjct: 90  YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149

Query: 277 PFSTL---LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC---------- 323
            F+++   L++VA+  D +   Q H   + + A     V+N+LV +Y+KC          
Sbjct: 150 TFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207

Query: 324 -------------------------GRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNL 357
                                    G F+  +E+   +  ++  V + AMIS YV +G  
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-------- 409
           +EAL +   M  + I  D+ T+ S++RA A    L LGKQ+H++V+R    S        
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLV 327

Query: 410 ----------------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
                                 ++ S +ALL  Y  SG + +A   FKEM E+NI+SW  
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +IS  A+NG  +  LK F  M + G++P   +    + +C+  G    G QY ++   K 
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKI 446

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
                     +++ +  + G  +EA ++   MP   D + W+++I +   H +   A   
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDV 505

Query: 568 ADQLFK 573
            +++ K
Sbjct: 506 YEEMLK 511



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 40/307 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N L+SGYV SG++  A+ +F  M ++  +SW I+I G ++     E  KLF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +G    DY  F+  +  C+         Q HA ++K G++S L   N+L+  Y K
Sbjct: 406 SCMKREGFEPCDY-AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR+VF+ MP  DSVS+NALI    + G   EA+ ++ EM   G +P   T    
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524

Query: 181 LSA--GVGLAD--------------IALGRQVHAFVV-------KTNFVENVF------- 210
           L+A    GL D              I  G   +A ++       K +  E+V        
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584

Query: 211 ---VANALLDLYSKHD----CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
              +  ALL     H      ++ A KLFG +PE DG +Y ++   +A   Q++E  ++ 
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMHAATGQWEEVARV- 642

Query: 264 RELQFTR 270
           R+L   R
Sbjct: 643 RKLMRDR 649



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 138/348 (39%), Gaps = 83/348 (23%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L +   +  LQ+ R +H   I         + N L+D+Y K      A+++F  +S    
Sbjct: 21  LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK 80

Query: 342 VPWTAMISAYVQKGNLE---------------------------------EALNLFIEMC 368
           +  T M+S Y   G++                                   A+NLF +M 
Sbjct: 81  IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140

Query: 369 RANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS- 426
                 D  TFAS+L   A +A       Q H+  ++SG        +AL+ +Y+K  S 
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200

Query: 427 ---LKDAIQTFKEMPERN--------------------------------IVSWNALISA 451
              L  A + F E+ E++                                +V++NA+IS 
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
               G  Q  L+    MV SG + D  +  SV+ AC+  GL++ G Q        Y LR 
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ-----VHAYVLR- 314

Query: 512 KKEHYA-----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +E ++     S+V +  + G FDEA  +  +MP + D + W+++++ 
Sbjct: 315 -REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/321 (20%), Positives = 114/321 (35%), Gaps = 84/321 (26%)

Query: 379 FASILRASAEL--ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +A+ LR    L   SL L + +H  +I  GF       + L+D+Y KS  L  A Q F E
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74

Query: 437 MPE---------------------------------RNIVSWNALISACAQNGDAQATLK 463
           + E                                 R+ V +NA+I+  + N D  + + 
Sbjct: 75  ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGLQYFNSMTQ------ 505
            F  M   G++PD+ +  SVL+  +            H   ++ G  Y  S++       
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194

Query: 506 -KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            K    P   H A  V        FDE          E DE  W++++     +   +  
Sbjct: 195 SKCASSPSLLHSARKV--------FDEI--------LEKDERSWTTMMTGYVKNGYFDLG 238

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG-----------VRK 613
           ++  + +    KL     Y AM + Y   G ++   ++ + M   G           +R 
Sbjct: 239 EELLEGMDDNMKL---VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295

Query: 614 VTAYSWVELKSKVHVFTANDE 634
                 ++L  +VH +    E
Sbjct: 296 CATAGLLQLGKQVHAYVLRRE 316


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 411/740 (55%), Gaps = 8/740 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y+   ++   R++F  M+ R  V+WT L+ GY Q     +   LF  MR +G   P
Sbjct: 97  LVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEG-VWP 155

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TF+++LS  +     +    VHA  IKFG  S + +CNSL++ Y K   ++ AR VF
Sbjct: 156 NPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 215

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +D VS+N L+ G    G + EA++LF + +      ++ T++  ++    L  + 
Sbjct: 216 CRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG 275

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
           L RQ+H+ V+K  F     V  AL+D Y+K   + +A  +F  M     V S+  MI   
Sbjct: 276 LARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     +  LF  ++      +   +ST+L+V     +     QIH Q I T      
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVS----EASFPPQIHAQVIKTNYECTP 391

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+  Y+K    EEA  IF  +     V W+AM++ Y Q G+   A N FI+M   
Sbjct: 392 TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMH 451

Query: 371 NISADQATFASILRASAE-LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            +  ++ T +S + A A   A + LG+Q H+  I+      +   SAL+ MYA+ GS+++
Sbjct: 452 GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F+   +R+++SWN+++S  AQ+G +Q  L  F  M   G   D ++ LSV+  C+H
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAH 571

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG QYF+ M + Y + P  +HYA MVD+  R+G  DE   L+  MPF     +W 
Sbjct: 572 AGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWR 631

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR+HKN+E  K AA++L  +E L D+A YV +SNIY+ AG+W+   +V+K M  +
Sbjct: 632 ALLGACRVHKNVELGKLAAEKLLSLEPL-DSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 690

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            VRK    SW+++K+KVH F A+D+ HP + +I  K+  +  ++K+EGY PDTS   HD 
Sbjct: 691 KVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDV 750

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            E+ K   L  HSERLA+AF LI TP  +P+ + KNLR   D H  +K++S+I  REI +
Sbjct: 751 AEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVM 810

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD  RFHHFK G CSC DFW
Sbjct: 811 RDCCRFHHFKSGVCSCGDFW 830



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 262/485 (54%), Gaps = 12/485 (2%)

Query: 94  QVHADIIKFGYNSILI-ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           Q+HA  ++ G++   I +  SLVD Y     +   R+VF+ M +++ V++ +L+TG+ + 
Sbjct: 76  QLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQA 135

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G+  + + LF  M+  G  P+ FTF++ LS       + LG+ VHA  +K      VFV 
Sbjct: 136 GVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVC 195

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N+L+++Y+K   V EAR +F  M   D VS+N ++     N +  E+L+LF + + +   
Sbjct: 196 NSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITM 255

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++  +ST++++ AN   L + RQ+H+  +     S   V  +L+D Y K G+ ++A ++
Sbjct: 256 LTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDV 315

Query: 333 FANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           F  +S   + V WTAMI   +Q G++  A  LF  M    ++ +  T+++IL  S     
Sbjct: 316 FLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEA--- 372

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
            S   Q+H+ VI++ +      G+AL+  Y+K  S ++A+  FK + ++++VSW+A+++ 
Sbjct: 373 -SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTC 431

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLR 510
            AQ GD      +F  M   G +P+  ++ S + AC S    ++ G Q F++++ K++  
Sbjct: 432 YAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ-FHAISIKHRCH 490

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
                 +++V +  R G  + A+ +  +   + D + W+S+++    H    +++KA D 
Sbjct: 491 DALCVSSALVSMYARKGSIENAQCVFERQT-DRDLLSWNSMLSGYAQHG---YSQKALDV 546

Query: 571 LFKME 575
             +ME
Sbjct: 547 FRQME 551



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 222/447 (49%), Gaps = 9/447 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +  AR +F  M  R  VSW  L+ G     +  EA +LF D R+    
Sbjct: 196 NSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITM 255

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             +  T++T+++ C+         Q+H+ ++K G++S   +  +L+D+Y K   LD A  
Sbjct: 256 LTES-TYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALD 314

Query: 130 VFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           VF  M   ++ VS+ A+I G  + G    A  LF  M+  G  P+D T++  L+    ++
Sbjct: 315 VFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VS 370

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           + +   Q+HA V+KTN+     V  AL+  YSK     EA  +F  + + D VS++ M+T
Sbjct: 371 EASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLT 430

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHTQTIVTTAI 307
           CYA       +   F ++       ++F  S+ +   A+    + +GRQ H  +I     
Sbjct: 431 CYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCH 490

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V+++LV MYA+ G  E A+ +F   +    + W +M+S Y Q G  ++AL++F +M
Sbjct: 491 DALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQM 550

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGS 426
               I  D  TF S++   A    +  G+Q    ++R  G    +   + ++D+Y+++G 
Sbjct: 551 EVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGK 610

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L + +   + MP       W AL+ AC
Sbjct: 611 LDETMSLIEGMPFPAGPTIWRALLGAC 637



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 167/302 (55%), Gaps = 4/302 (1%)

Query: 187 LADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           + D  LG+Q+HA  V+      ++ V  +L+D+Y     V++ RK+F  M + + V++  
Sbjct: 68  VPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTS 127

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           ++T Y       + + LF  ++      + F FS++LS+VA++  + +G+ +H Q+I   
Sbjct: 128 LLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFG 187

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S V V NSL++MYAKCG  EEA+ +F  +     V W  +++  V  G   EAL LF 
Sbjct: 188 CCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFH 247

Query: 366 EMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +  R++I+   ++T+++++   A L  L L +QLHS V++ GF S     +AL+D Y K+
Sbjct: 248 D-SRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKA 306

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           G L  A+  F  M   +N+VSW A+I  C QNGD       F  M + G  P+ ++  ++
Sbjct: 307 GQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTI 366

Query: 484 LS 485
           L+
Sbjct: 367 LT 368



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 5/212 (2%)

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQLHSF 401
           PWT   S   Q G + +AL+ F++  R             I++    +    LGKQLH+ 
Sbjct: 22  PWTMPFSTTWQ-GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHAL 80

Query: 402 VIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            +R G    ++  G++L+DMY    S+ D  + F+ M +RN+V+W +L++   Q G    
Sbjct: 81  CVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLD 140

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            +  F  M   G  P+  +  SVLS  +  G+++ G Q+ ++ + K+          S++
Sbjct: 141 VMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLG-QHVHAQSIKFGCCSTVFVCNSLM 199

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++  + G  +EA  +  +M    D + W++++
Sbjct: 200 NMYAKCGLVEEARVVFCRMETR-DMVSWNTLM 230



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ L+S Y + G++  A+ +F    DR  +SW  ++ GY+Q    ++A  +F  M  + G
Sbjct: 496 SSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVE-G 554

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLA 127
            D D +TF +++ GC+      E  Q    +++ +G    +     +VD Y +   LD  
Sbjct: 555 IDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDET 614

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
             + + MP     +    + G  +   N E  KL  E + L  +P D
Sbjct: 615 MSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAE-KLLSLEPLD 660


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/743 (34%), Positives = 420/743 (56%), Gaps = 5/743 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N ++  Y K  +L  AR+LF+ M ++   VSW  +I  YS   Q  EA +LF +M+   
Sbjct: 218 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-A 276

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P+  TF   L  C +     + + +HA ++K  Y   + + N+L+  Y +   +  A
Sbjct: 277 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 336

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F  M   D++S+N++++GF + GL  EA++ + EM+  G KP      + ++A    
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 396

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +   G Q+HA+ +K     ++ V N+L+D+Y+K   +     +F +MP+ D VS+  +I
Sbjct: 397 GNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 456

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A N  +  +L+LFRE+Q    D      S++L   +    +   ++IH+  I+   +
Sbjct: 457 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY-IIRKGL 515

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++ + N +VD+Y +CG  + A  +F  +     V WT+MIS YV  G   EAL LF  M
Sbjct: 516 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 575

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  D  +  SIL A+A L++L  GK++H F+IR GF+      S L+DMYA+ G+L
Sbjct: 576 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 635

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + +   F  +  +++V W ++I+A   +G  +A +  F  M      PD ++ ++VL AC
Sbjct: 636 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 695

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG ++  SM  +Y+L P  EHYA +VD+L R+   +EA + +  M  EP   +
Sbjct: 696 SHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEV 755

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C+IH N E  + AA +L +M+   +   YV +SN+Y+   +W+ V  V+  M+
Sbjct: 756 WCALLGACQIHSNKELGEIAAQKLLEMDP-ENPGNYVLVSNVYSAERRWKDVEXVRMRMK 814

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCAL 666
             G++K    SW+E+ +KVH F A D+ HPQ+ EI  K+  + +++ KE GY   T   L
Sbjct: 815 ASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVL 874

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+  EE KV+ L  HSERLAIA+ ++ TPEG+ + + KNLR C DCH   KLISK   RE
Sbjct: 875 HNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERE 934

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + +RD++RFHHFK G CSC D W
Sbjct: 935 LVMRDANRFHHFKGGVCSCGDVW 957



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 185/579 (31%), Positives = 311/579 (53%), Gaps = 23/579 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G L  A +LF+ M  +T  +W  +IG Y    +   + +L+ +MR   G   
Sbjct: 120 LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVS-GIPL 178

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  +L  C          +VH   IK GY SI+ + NS+V  Y K   L+ AR++F
Sbjct: 179 DACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLF 238

Query: 132 KEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
             MP+K D VS+N++I+ ++  G + EA++LF EMQ     P+ +TF AAL A    + I
Sbjct: 239 DRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFI 298

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G  +HA V+K+++  NVFVANAL+ +Y++   + EA  +F  M + D +S+N M++ +
Sbjct: 299 KQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGF 358

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVA------NKLDLQIGRQIHTQTIV 303
             N  Y E+L+ + E++    D  Q P    ++S++A      N L    G QIH   + 
Sbjct: 359 VQNGLYHEALQFYHEMR----DAGQKPDLVAVISIIAASARSGNTLH---GMQIHAYAMK 411

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S+++V NSLVDMYAK    +    IF  +     V WT +I+ + Q G+   AL L
Sbjct: 412 NGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 471

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F E+    I  D    +SIL A + L  +S  K++HS++IR G +S++   + ++D+Y +
Sbjct: 472 FREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGE 530

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G++  A + F+ +  +++VSW ++IS    NG A   L+ F  M ++G +PDS+SL+S+
Sbjct: 531 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 590

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSA +    +++G +    + +K     +    +++VD+  R G  +++  +        
Sbjct: 591 LSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVF-NFIRNK 648

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           D ++W+S+IN+  +H       +AA  LF+  +    AP
Sbjct: 649 DLVLWTSMINAYGMHG----CGRAAIDLFRRMEDESIAP 683



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 275/546 (50%), Gaps = 27/546 (4%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVT----FATLLSGCSEPDTANELIQVHADIIKFG- 103
           ++    EAF+   D+  +    P   +    ++++L  C      +E  QVHA +I    
Sbjct: 52  KRGSVNEAFQSLTDLFAN--QSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNA 109

Query: 104 -YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
            +NS+ +    LV  Y K  CL  A ++F  MP K   ++NA+I  +   G    +++L+
Sbjct: 110 LFNSVFL-STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 168

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            EM+  G      TF   L A   L D   G +VH   +K  +V  VFVAN+++ +Y+K 
Sbjct: 169 REMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 228

Query: 223 DCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
           + +  AR+LF  MPE  D VS+N MI+ Y+ N Q  E+L+LF E+Q      + + F   
Sbjct: 229 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 288

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L    +   ++ G  IH   + ++    V VAN+L+ MYA+ G+  EA  IF N+    T
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 348

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           + W +M+S +VQ G   EAL  + EM  A    D     SI+ ASA   +   G Q+H++
Sbjct: 349 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAY 408

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            +++G  S++  G++L+DMYAK  S+K     F +MP++++VSW  +I+  AQNG     
Sbjct: 409 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 468

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ--KYKLRPKKEHYA-- 517
           L+ F ++   G   D + + S+L ACS       GL+  +S+ +   Y +R         
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLSDLVLQ 521

Query: 518 -SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             +VD+    G  D A ++   + F+ D + W+S+I SC +H  L      A +LF + K
Sbjct: 522 NGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVHNGL---ANEALELFHLMK 576

Query: 577 LRDAAP 582
                P
Sbjct: 577 ETGVEP 582



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 232/450 (51%), Gaps = 4/450 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y + G +  A  +F +M D   +SW  ++ G+ Q   + EA + + +MR
Sbjct: 316 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 375

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD V   ++++  +        +Q+HA  +K G +S L + NSLVD Y K   +
Sbjct: 376 -DAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSM 434

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                +F +MP KD VS+  +I G A+ G +  A++LF E+Q  G        ++ L A 
Sbjct: 435 KYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC 494

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GL  I+  +++H+++++   + ++ + N ++D+Y +   V  A ++F  +   D VS+ 
Sbjct: 495 SGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWT 553

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+CY  N    E+L+LF  ++ T  +       ++LS  A+   L+ G++IH   I  
Sbjct: 554 SMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK 613

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + E  +A++LVDMYA+CG  E+++ +F  + +   V WT+MI+AY   G    A++LF
Sbjct: 614 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 673

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
             M   +I+ D   F ++L A +    ++ G++ L S              + L+D+  +
Sbjct: 674 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGR 733

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  L++A Q  K M  E     W AL+ AC
Sbjct: 734 ANHLEEAYQFVKGMEVEPTAEVWCALLGAC 763


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/657 (38%), Positives = 385/657 (58%), Gaps = 4/657 (0%)

Query: 96  HADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           HA IIK   N +   I N LV+ Y K+   + A+ +    P +  V++ ALI G  + G 
Sbjct: 29  HAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR 88

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
              A+  F  M+    +P+DFTF  A  A   L    +G+QVHA  VK   + +VFV  +
Sbjct: 89  FTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCS 148

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
             D+YSK     EARK+F EMPE +  ++N  ++      +Y ++L  F E +   ++ +
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPN 208

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              F   L+  A    L++GRQ+H   + +   ++V VAN L+D Y KC +   ++ IF+
Sbjct: 209 LITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFS 268

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +S  + V W +MI +YVQ    E+A  +F+   +  I       +S+L A A L+ L +
Sbjct: 269 GISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEV 328

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GK +H+  +++  + N+F GSAL+DMY K GS++DA + F EMPERN+V+WNA+I   A 
Sbjct: 329 GKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAH 388

Query: 455 NGDAQATLKSFEDMVQSGYQ--PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            G A   +  F++M    ++  P+ V+ + VLSACS  G +  G++ F SM  +Y + P 
Sbjct: 389 QGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPG 448

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHYA +VD+L R+G  ++A + + +MP  P   +W +++ + ++    E  K AAD LF
Sbjct: 449 AEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLF 508

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           +++ L D+  +V +SN++A AG+WE  + V+K M++ G++K    SW+   + VHVF A 
Sbjct: 509 ELDPL-DSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAK 567

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  H + +EI+  +  L  EM+  GY PDTS AL D +EE K   + YHSE++A+AF LI
Sbjct: 568 DTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLI 627

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + P G PI + KNLR C DCH+AIK IS I GREI VRD++ FH F+D  CSCRD+W
Sbjct: 628 SIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 238/454 (52%), Gaps = 5/454 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K     +A+ L +   +R+ V+WT LI G  Q  +F  A   F +MR D   
Sbjct: 46  NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-I 104

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF           +     QVHA  +K G  S + +  S  D Y K    + AR+
Sbjct: 105 QPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARK 164

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F EMP+++  ++NA ++    EG  ++A+  F+E +H G++P+  TF A L+A  G + 
Sbjct: 165 MFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASY 224

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ+H FV+++ F  +V VAN L+D Y K   V  +  +F  + + + VS+  MI  
Sbjct: 225 LRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVS 284

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N++ +++  +F   +    + + F  S++LS  A    L++G+ +HT  +    +  
Sbjct: 285 YVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGN 344

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-C 368
           + V ++LVDMY KCG  E+A+  F  +   + V W AMI  Y  +G  + A+ LF EM C
Sbjct: 345 IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 404

Query: 369 RAN-ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            ++ ++ +  TF  +L A +   S+++G ++  S   R G        + ++D+  ++G 
Sbjct: 405 GSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGM 464

Query: 427 LKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           ++ A Q  K+MP R  VS W AL+ A    G ++
Sbjct: 465 VEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 203/424 (47%), Gaps = 11/424 (2%)

Query: 192 LGRQVHAFVVKTNFVENV---FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           LGR  HA ++KT  ++N    F+ N L+++YSK D    A+ L    P    V++  +I 
Sbjct: 24  LGRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N ++  +L  F  ++      + F F        +     +G+Q+H   +    IS
Sbjct: 82  GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  S  DMY+K G  EEA+++F  +   +   W A +S  V +G  ++AL  FIE  
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFR 201

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                 +  TF + L A A  + L LG+QLH FV++SGF ++V   + L+D Y K   + 
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            +   F  + + N VSW ++I +  QN + +     F    + G +P    + SVLSAC+
Sbjct: 262 CSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              ++E G +  +++  K  +       +++VD+  + G  ++AE+   +MP E + + W
Sbjct: 322 GLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTW 379

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS---QVKKA 605
           +++I         + A    D++      R A  YV    + +   +  SV+   ++ ++
Sbjct: 380 NAMIGGYAHQGQADMAVTLFDEM-TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFES 438

Query: 606 MRER 609
           MR R
Sbjct: 439 MRGR 442



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 23/211 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM------VDRTAVSWTILIGGYSQKNQFR 54
           MP +N V+ N +I GY   G    A  LF+ M      V    V++  ++   S+     
Sbjct: 371 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVN 430

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
              ++F  MR   G +P    +A ++        A  + Q +  I K      + +  +L
Sbjct: 431 VGMEIFESMRGRYGIEPGAEHYACVVDLLGR---AGMVEQAYQFIKKMPIRPTVSVWGAL 487

Query: 115 VDS---YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           + +   + K     +A     E+   DS +   L   FA  G  EEA  +  EM+ +G K
Sbjct: 488 LGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIK 547

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
                       G G + I  G  VH F  K
Sbjct: 548 -----------KGAGCSWITAGNAVHVFQAK 567


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/742 (34%), Positives = 420/742 (56%), Gaps = 5/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           N ++  Y K  +L  AR+LF+ M ++   VSW  +I  YS   Q  EA +LF +M+    
Sbjct: 255 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-AS 313

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF   L  C +     + + +HA ++K  Y   + + N+L+  Y +   +  A 
Sbjct: 314 LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAA 373

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  M   D++S+N++++GF + GL  EA++ + EM+  G KP      + ++A     
Sbjct: 374 NIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSG 433

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +   G Q+HA+ +K     ++ V N+L+D+Y+K   +     +F +MP+ D VS+  +I 
Sbjct: 434 NTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIA 493

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A N  +  +L+LFRE+Q    D      S++L   +    +   ++IH+  I+   +S
Sbjct: 494 GHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY-IIRKGLS 552

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ + N +VD+Y +CG  + A  +F  +     V WT+MIS YV  G   EAL LF  M 
Sbjct: 553 DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK 612

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  +  SIL A+A L++L  GK++H F+IR GF+      S L+DMYA+ G+L+
Sbjct: 613 ETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLE 672

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            +   F  +  +++V W ++I+A   +G  +A +  F  M      PD ++ ++VL ACS
Sbjct: 673 KSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACS 732

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ EG ++  SM  +Y+L P  EHY  +VD+L R+   +EA + +  M  EP   +W
Sbjct: 733 HSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVW 792

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C+IH N E  + AA +L +M+   +   YV +SN+YA   +W+ V +V+  M+ 
Sbjct: 793 CALLGACQIHSNKELGEIAAQKLLEMDP-ENPGNYVLVSNVYAAERRWKDVEEVRMRMKA 851

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALH 667
            G++K    SW+E+ +KVH F A D+ HPQ+ EI  K+  + +++ KE GY   T   LH
Sbjct: 852 SGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLH 911

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           +  EE KV+ L  HSERLAIA+ ++ TPEG+ + + KNLR C DCH   KLISK   RE+
Sbjct: 912 NAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFEREL 971

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD++RFHHFK G CSC D W
Sbjct: 972 VMRDANRFHHFKGGVCSCGDVW 993



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 275/546 (50%), Gaps = 27/546 (4%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVT----FATLLSGCSEPDTANELIQVHADIIKFG- 103
           ++    EAF+   D+  +    P   +    ++++L  C      +E  QVHA +I    
Sbjct: 88  KRGSVNEAFQSLTDLFAN--QSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNA 145

Query: 104 -YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
            +NS+ +    LV  Y K  CL  A ++F  MP K   ++NA+I  +   G    +++L+
Sbjct: 146 LFNSVFL-STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELY 204

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            EM+  G      TF   L A   L D   G +VH   +K  +V  VFVAN+++ +Y+K 
Sbjct: 205 REMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC 264

Query: 223 DCVVEARKLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
           + +  AR+LF  MPE  D VS+N MI+ Y+ N Q  E+L+LF E+Q      + + F   
Sbjct: 265 NDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAA 324

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L    +   ++ G  IH   + ++    V VAN+L+ MYA+ G+  EA  IF N+    T
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 384

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           + W +M+S +VQ G   EAL  + EM  A    D     SI+ ASA   +   G Q+H++
Sbjct: 385 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAY 444

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            +++G  S++  G++L+DMYAK  S+K     F +MP++++VSW  +I+  AQNG     
Sbjct: 445 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 504

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ--KYKLRPKKEHYA-- 517
           L+ F ++   G   D + + S+L ACS       GL+  +S+ +   Y +R         
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLSDLVLQ 557

Query: 518 -SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             +VD+    G  D A ++   + F+ D + W+S+I SC +H  L      A +LF + K
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVHNGL---ANEALELFHLMK 612

Query: 577 LRDAAP 582
                P
Sbjct: 613 ETGVEP 618



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 231/450 (51%), Gaps = 4/450 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y + G +  A  +F +M D   +SW  ++ G+ Q   + EA + + +MR
Sbjct: 352 NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR 411

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD V   ++++  +        +Q+HA  +K G +S L + NSLVD Y K   +
Sbjct: 412 -DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSM 470

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                +F +MP KD VS+  +I G A+ G +  A++LF E+Q  G        ++ L A 
Sbjct: 471 KYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC 530

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GL  I+  +++H+++++   + ++ + N ++D+Y +   V  A ++F  +   D VS+ 
Sbjct: 531 SGLKLISSVKEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWT 589

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+CY  N    E+L+LF  ++ T  +       ++LS  A+   L+ G++IH   I  
Sbjct: 590 SMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK 649

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + E  +A++LVDMYA+CG  E+++ +F  + +   V WT+MI+AY   G    A++LF
Sbjct: 650 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 709

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
             M   +I+ D   F ++L A +    ++ G++ L S                L+D+  +
Sbjct: 710 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGR 769

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  L++A Q  K M  E     W AL+ AC
Sbjct: 770 ANHLEEAYQFVKGMEVEPTAEVWCALLGAC 799


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/622 (39%), Positives = 369/622 (59%), Gaps = 34/622 (5%)

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R +F E+P+K+ V FN +I  +    L  +A+ +F  M   G  P  +T+   L A  G 
Sbjct: 91  RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 150

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+ +G Q+HA VV+     NVFV N L+ +Y K  C+VEA ++  +MP  D VS+N ++
Sbjct: 151 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLV 210

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A N Q+ ++L++ +E++           ++LL  V N                 T +
Sbjct: 211 AGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTN-----------------TCL 253

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V                   KE+F  L++ S V W  MI+ Y+      EA+++F++M
Sbjct: 254 DNVSFV----------------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQM 297

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  D  + AS+L A  +L++L LG+++H +V+R     N+   +AL+DMYAK G L
Sbjct: 298 EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCL 357

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + A + F +M  R++VSW ++ISA   NG  +  +  F  M   G  PDS++ +SVLSAC
Sbjct: 358 EYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSAC 417

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG  YF  MT++ K+ P+ EH+  MVD+L R+G  DEA   + QMP EP+E +
Sbjct: 418 SHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERV 477

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++CR++ N+     AADQLF++     +  YV +SNIYA AG+WE V+ V+  M+
Sbjct: 478 WGALLSACRVYSNMIIGLLAADQLFQLCP-EQSGYYVLLSNIYAKAGRWEDVTTVRSIMK 536

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            +G++K+   S  EL ++VH F A D+ HPQ+ +I  +++  + +MK+ GY P+T  ALH
Sbjct: 537 TKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALH 596

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D +EE K   L  HSE+LAIAFA++NT  GSPI + KNLR C DCH A KLISKI GREI
Sbjct: 597 DVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREI 656

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
           T+RD++RFHHF +G CSC D+W
Sbjct: 657 TIRDTNRFHHFYNGVCSCGDYW 678



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 36/443 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G   + R +F+ +  +  V + ++I  Y   + + +A  +F +M    G DP
Sbjct: 77  LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM-AGHGIDP 135

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ T+  +L   S  +     +Q+HA +++ G +  + + N L+  Y K  CL  A RV 
Sbjct: 136 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 195

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MP +D VS+N+L+ G A+ G  ++A+++  EM+ LG KP   T A+ L A        
Sbjct: 196 DQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------- 247

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                              V N  LD  S        +++F ++     VS+NVMI  Y 
Sbjct: 248 -------------------VTNTCLDNVSF------VKEMFMKLANKSLVSWNVMIAVYM 282

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E++ +F +++    D      +++L    +   L +GR+IH   +       + 
Sbjct: 283 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 342

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+DMYAKCG  E A+E+F  +     V WT+MISAY   G   +A++LF  M    
Sbjct: 343 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 402

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDA 430
           ++ D   F S+L A +    L  G+     +      +  +     ++D+  ++G + +A
Sbjct: 403 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 462

Query: 431 IQTFKEMP-ERNIVSWNALISAC 452
               K+MP E N   W AL+SAC
Sbjct: 463 YGFIKQMPMEPNERVWGALLSAC 485



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 46/361 (12%)

Query: 290 DLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
           D++  +++H++  +   + S   +   L+  YA CG     + IF  +   + V +  MI
Sbjct: 50  DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
            +YV      +AL +F  M    I  D  T+  +L+AS+    L +G Q+H+ V+R G  
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            NVF G+ L+ MY K G L +A +   +MP R++VSWN+L++ CA+NG     L+  ++M
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 229

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
              G +PD+ ++ S+L A ++  L  + + +   M  K   +     +  M+ +   +  
Sbjct: 230 ELLGLKPDAGTMASLLPAVTNTCL--DNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSM 286

Query: 529 FDEAEKLMAQM---PFEPDEIMWSSVINSC----------RIHKN--------------- 560
             EA  +  QM     +PD I  +SV+ +C          RIH+                
Sbjct: 287 PAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 346

Query: 561 ----------LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
                     LE+A++  DQ+    K RD   + +M + Y + G+      +   M++ G
Sbjct: 347 LIDMYAKCGCLEYAREVFDQM----KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 402

Query: 611 V 611
           +
Sbjct: 403 L 403



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 42/351 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LIS Y K G L  A  + + M  R  VSW  L+ G ++  QF +A ++  +M 
Sbjct: 171 NVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME 230

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD  T A+LL                             + N+ +D+      +
Sbjct: 231 L-LGLKPDAGTMASLLPA---------------------------VTNTCLDN------V 256

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
              + +F ++  K  VS+N +I  +    +  EA+ +F++M+     P   + A+ L A 
Sbjct: 257 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L+ + LGR++H +VV+     N+ + NAL+D+Y+K  C+  AR++F +M   D VS+ 
Sbjct: 317 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 376

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR-QIHTQTIV 303
            MI+ Y  N + ++++ LF  +Q    +     F ++LS  ++   L  GR      T  
Sbjct: 377 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 436

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
              +  ++    +VD+  + G+ +EA   +  +  +   P    W A++SA
Sbjct: 437 CKIVPRIEHFVCMVDLLGRAGQVDEA---YGFIKQMPMEPNERVWGALLSA 484


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/693 (36%), Positives = 395/693 (56%), Gaps = 36/693 (5%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALITG 148
           +L Q+H+  I  G  S  I+   ++   CK    D+  AR VF  MP  +   +N +I G
Sbjct: 34  QLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKG 93

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +++ G    A+ ++ EM   G  P ++T+   L        +  GR++H  +VK  F  N
Sbjct: 94  YSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSN 153

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           VFV NAL+ LYS    V  AR +F    + D V++NVMI+ Y  ++Q+ ES+KLF E++ 
Sbjct: 154 VFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMER 213

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFE 327
            R   S     ++LS  +   DL +G+++H + +    I  V+V  N+L+DMYA CG  +
Sbjct: 214 MRVLPSSITLVSVLSACSKLKDLNVGKRVH-RYVKDLKIEPVRVLENALIDMYAACGDMD 272

Query: 328 EAKEIFANL-------------------------SHISTVP------WTAMISAYVQKGN 356
            A  IF N+                         ++   +P      WTAMI  Y+Q   
Sbjct: 273 TALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNR 332

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            +E L+LF EM  ANI  D+ T  SIL A A L +L LG+ + +++ ++    + F G+A
Sbjct: 333 FKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNA 392

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY   G+++ AI+ F  MP R+ +SW A+I   A NG  +  L  F  M+++   PD
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPD 452

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            V+ + VL AC+H G++++G ++F  MT ++ + P   HY  MVD+L R+G   EA +++
Sbjct: 453 EVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVI 512

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP +P+ I+W S++ +CR+H++ E A+ AA Q+ ++E   + A YV + NIYA   +W
Sbjct: 513 KNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEP-ENGAVYVLLCNIYAACNRW 571

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           E + +V+K M +RG++K    S +E+   VH F A D++HPQ+ EI  K++ +  ++K  
Sbjct: 572 EKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFA 631

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDTS    D  EE K  ++  HSE+LAIAF LI++  G  I ++KNLR C DCH   
Sbjct: 632 GYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVA 691

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KL+SK+  RE+ VRD +RFHHF+ G CSC+D+W
Sbjct: 692 KLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 36/382 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    N LI  Y  SG ++ AR +F+       V+W ++I GY++  QF E+ KLF +
Sbjct: 151 SSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDE 210

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       P  +T  ++LS CS+    N   +VH  +       + ++ N+L+D Y    
Sbjct: 211 MER-MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACG 269

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEG----------------------------- 153
            +D A  +F  M  +D +S+ A++TGF   G                             
Sbjct: 270 DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ 329

Query: 154 LN--EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           +N  +E + LF EMQ    KP +FT  + L+A   L  + LG  + A++ K     + FV
Sbjct: 330 VNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFV 389

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NAL+D+Y     V +A ++F  MP  D +S+  +I   A N   +E+L +F ++     
Sbjct: 390 GNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASI 449

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEA 329
              +     +L    +   +  G++   +      I E  VA+   +VD+  + G  +EA
Sbjct: 450 TPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGI-EPNVAHYGCMVDLLGRAGHLKEA 508

Query: 330 KEIFANLS-HISTVPWTAMISA 350
            E+  N+    +++ W +++ A
Sbjct: 509 HEVIKNMPVKPNSIVWGSLLGA 530



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 162/339 (47%), Gaps = 8/339 (2%)

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK--CGRFEEAKEIF 333
            P +  LS++     +   +QIH+QTI T  IS   V   ++    K   G  E A+ +F
Sbjct: 17  LPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVF 76

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   +   W  MI  Y + G    A++++ EM    +  D+ T+  +L+      ++ 
Sbjct: 77  DTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVK 136

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G++LH  +++ GF SNVF  +AL+ +Y+ SG +  A   F    + ++V+WN +IS   
Sbjct: 137 CGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYN 196

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           ++     ++K F++M +    P S++L+SVLSACS    +  G +  +   +  K+ P +
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHRYVKDLKIEPVR 255

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
               +++D+    G  D A  +   M    D I W++++       NL     A +   K
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTG---FTNLGQVGLARNYFDK 311

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           M + RD   + AM + Y    +++ V  + + M+   ++
Sbjct: 312 MPE-RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++ +S   +++G+   G +  AR  F+ M +R  VSWT +I GY Q N+F+E   LF
Sbjct: 281 MKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLF 340

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
            +M+      PD  T  ++L+ C+        E I+ + D  +   +S   + N+L+D Y
Sbjct: 341 REMQA-ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDS--FVGNALIDMY 397

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
                ++ A R+F  MP +D +S+ A+I G A  G  EEA+ +F +M      P + T  
Sbjct: 398 FNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCI 457

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
             L A      +  G++  A +   + +E NV     ++DL  +   + EA ++   MP
Sbjct: 458 GVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP 516


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/745 (36%), Positives = 431/745 (57%), Gaps = 15/745 (2%)

Query: 12  LISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           LI  Y   G L  AR +F+   +  TAV    +I G+ +  Q  E  +LF   R  G  D
Sbjct: 85  LIRVYSDLGFLGHARNVFDQCSLPETAVC-NAMIAGFLRNQQHMEVPRLF---RMMGSCD 140

Query: 71  PDYVTFATL--LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +  ++  +  L  C++       +++    ++ G++  L + +S+V+   K   L  A+
Sbjct: 141 IEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQ 200

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  MP+KD V +N++I G+ ++GL  E+I++F+EM   G +PS  T A  L A     
Sbjct: 201 KVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSG 260

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              +G   H++V+      +VFV  +L+D+YS       A  +F  M     +S+N MI+
Sbjct: 261 LKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMIS 320

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTT 305
            Y  N    ES  LFR L  +    S F   TL+S++   +   DL+ GR +H+  I   
Sbjct: 321 GYVQNGMIPESYALFRRLVQSG---SGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKE 377

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S + ++ ++VDMY+KCG  ++A  +F  +   + + WTAM+    Q G  E+AL LF 
Sbjct: 378 LESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFC 437

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    ++A+  T  S++   A L SL+ G+ +H+  IR G+  +    SAL+DMYAK G
Sbjct: 438 QMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCG 497

Query: 426 SLKDAIQTFK-EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            +  A + F  E   ++++  N++I     +G  +  L  +  M++   +P+  + +S+L
Sbjct: 498 KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLL 557

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACSH GL+EEG   F+SM + + +RP+ +HYA +VD+  R+G  +EA++L+ QMPF+P 
Sbjct: 558 TACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPS 617

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +  ++++ CR HKN     + AD+L  ++ L ++  YV +SNIYA A +WESV+ ++ 
Sbjct: 618 TDVLEALLSGCRTHKNTNMGIQIADRLISLDYL-NSGIYVMLSNIYAEARKWESVNYIRG 676

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            MR +G++K+  YS +E+ +KV+ F A+D+ HP   +I + +ENL  E++ EGY PDTSC
Sbjct: 677 LMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSC 736

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            L D +E +KV+ L  HSERLAIAF L++TP GS I + KNLR C DCH   K ISKI  
Sbjct: 737 VLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQ 796

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI VRD++RFHHF +G CSC DFW
Sbjct: 797 REIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 268/556 (48%), Gaps = 7/556 (1%)

Query: 89  ANELIQV---HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           +N LI V   HA IIK   ++   +   L+  Y  +  L  AR VF +    ++   NA+
Sbjct: 57  SNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAM 116

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I GF +   + E  +LF  M     + + +T   AL A   L D  +G ++    V+  F
Sbjct: 117 IAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGF 176

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +++V +++++   K   + +A+K+F  MPE D V +N +I  Y     + ES+++F E
Sbjct: 177 HLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLE 236

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +       S    + LL         ++G   H+  +     ++V V  SLVDMY+  G 
Sbjct: 237 MIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
              A  +F ++   S + W AMIS YVQ G + E+  LF  + ++    D  T  S++R 
Sbjct: 297 TGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRG 356

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            ++ + L  G+ LHS +IR    S++   +A++DMY+K G++K A   F  M ++N+++W
Sbjct: 357 CSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITW 416

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            A++   +QNG A+  LK F  M +     +SV+L+S++  C+H G + +G +  ++   
Sbjct: 417 TAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKG-RTVHAHFI 475

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           ++         ++++D+  + G    AEKL        D I+ +S+I    +H +  +A 
Sbjct: 476 RHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYAL 535

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM-RERGVRKVTAY--SWVEL 622
               ++ +     +   +V++    + +G  E    +  +M R+  VR    +    V+L
Sbjct: 536 GVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDL 595

Query: 623 KSKVHVFTANDELHPQ 638
            S+       DEL  Q
Sbjct: 596 HSRAGRLEEADELVKQ 611


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/776 (35%), Positives = 421/776 (54%), Gaps = 31/776 (3%)

Query: 2    PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
            P  +    N L++ Y K G+L  AR++F+ + DR  VSW  +I    +  ++  +  LF 
Sbjct: 363  PPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFR 422

Query: 62   DMRTDGGSDPDYVTFATLLSGCSEPDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCK 120
             M ++   DP   T  ++   CS       L  QVHA  ++ G +      N+LV  Y +
Sbjct: 423  LMLSEN-VDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYAR 480

Query: 121  IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            +  ++ A+ +F     KD VS+N +I+  ++    EEA+     M   G +P   T A+ 
Sbjct: 481  LGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASV 540

Query: 181  LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A   L  + +GR++H + ++  + +EN FV  AL+D+Y       + R +F  +    
Sbjct: 541  LPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRT 600

Query: 240  GVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
               +N ++  YA NE   ++L+LF E+   + F  +   F+++L              IH
Sbjct: 601  VAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIH 660

Query: 299  TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
               +      +  V N+L+DMY++ GR E +K IF  ++    V W  MI+  +  G  +
Sbjct: 661  GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYD 720

Query: 359  EALNLFIEMCRAN------------------ISADQATFASILRASAELASLSLGKQLHS 400
            +ALNL  EM R                       +  T  ++L   A LA+L  GK++H+
Sbjct: 721  DALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780

Query: 401  FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            + ++     +V  GSAL+DMYAK G L  A + F +MP RN+++WN LI A   +G  + 
Sbjct: 781  YAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEE 840

Query: 461  TLKSFEDMVQSG------YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
             L+ F  M   G       +P+ V+ +++ +ACSH G+++EGL  F++M   + + P+ +
Sbjct: 841  ALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGD 900

Query: 515  HYASMVDILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFK 573
            HYA +VD+L RSG   EA +L+  MP   +++  WSS++ +CRIH+++EF + AA  LF 
Sbjct: 901  HYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFV 960

Query: 574  MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
            +E    A+ YV MSNIY+ AG W+    V+K M+E GVRK    SW+E   +VH F + D
Sbjct: 961  LEP-NVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGD 1019

Query: 634  ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
              HPQ+ E+   +E L Q M+KEGY PD SC LH+ D+E K   L  HSERLAIAF L+N
Sbjct: 1020 ASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLN 1079

Query: 694  TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            TP G+ I V KNLR C DCH A K+ISKI  REI +RD  RFHHF +G CSC D+W
Sbjct: 1080 TPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 269/553 (48%), Gaps = 27/553 (4%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R+   W  L+   +  + FR+A   +  M        ++   A L +  +  D      Q
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGK-Q 351

Query: 95  VHADIIKFGY--NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +HA + KFG+   S + + NSLV+ Y K   L  AR+VF ++P +D VS+N++I    + 
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL-ADIALGRQVHAFVVKTNFVENVFV 211
              E ++ LF  M      P+ FT  +   A   +   + LG+QVHA+ ++   +   + 
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR-TYT 470

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NAL+ +Y++   V +A+ LFG     D VS+N +I+  + N++++E+L     +     
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAK 330
                  +++L   +    L+IGR+IH   +    + E   V  +LVDMY  C + ++ +
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAEL 389
            +F  +   +   W A+++ Y +    ++AL LF+EM   +    +  TFAS+L A    
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
              S  + +H ++++ GF  + +  +AL+DMY++ G ++ +   F  M +R+IVSWN +I
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710

Query: 450 SACA------------------QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + C                   Q  D   T   +ED     ++P+SV+L++VL  C+   
Sbjct: 711 TGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA 770

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            + +G +  ++   K KL       +++VD+  + GC + A ++  QMP   + I W+ +
Sbjct: 771 ALGKGKE-IHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVL 828

Query: 552 INSCRIHKNLEFA 564
           I +  +H   E A
Sbjct: 829 IMAYGMHGKGEEA 841


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/698 (35%), Positives = 407/698 (58%), Gaps = 2/698 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +I+ Y++ G+   A  +F  M  R  V++  LI G++Q      A ++F +M+  G S
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VT ++LL+ C+      +  Q+H+ + K G +S  I+  SL+D Y K   ++ A  
Sbjct: 242 -PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F    + + V +N ++  F +     ++ +LF +MQ  G +P+ FT+   L       +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I LG Q+H+  VKT F  +++V+  L+D+YSK+  + +AR++   + E D VS+  MI  
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +E  K++L  F+E+Q           ++ +S  A    ++ G QIH +  V+    +
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V + N+LV++YA+CGR  EA   F  + H   + W  ++S + Q G  EEAL +F+ M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + +  +  TF S L ASA LA +  GKQ+H+ VI++G       G+AL+ +Y K GS +D
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F EM ERN VSWN +I++C+Q+G     L  F+ M + G +P+ V+ + VL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEGL YF SM+ +Y +RP+ +HYA ++DI  R+G  D A+K + +MP   D ++W 
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV  +W +  QV+K MR+R
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEP-HDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GVRK    SW+E+K+ VH F   D LHP   +I   +  +   + K GYK +     HD+
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDK 839

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
           ++E +  +   HSE+LA+ F L++ P   P+ V+KNLR
Sbjct: 840 EQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLR 877



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 302/567 (53%), Gaps = 3/567 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +  N+LI  Y K+G +  AR +F  +  R  VSW  ++ GY+Q     EA  L+  M   
Sbjct: 78  IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G     YV  +++LS C++ +   +   +HA   K G+ S + + N+++  Y +     L
Sbjct: 138 GVVPTPYV-LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL 196

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A RVF +MP +D+V+FN LI+G A+ G  E A+++F EMQ  G  P   T ++ L+A   
Sbjct: 197 AERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACAS 256

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  G Q+H+++ K     +  +  +LLDLY K   V  A  +F      + V +N+M
Sbjct: 257 LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  +       +S +LF ++Q      +QF +  +L       ++ +G QIH+ ++ T  
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++ V+  L+DMY+K G  E+A+ +   L     V WT+MI+ YVQ    ++AL  F E
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M +  I  D    AS +   A + ++  G Q+H+ +  SG+  +V   +AL+++YA+ G 
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +++A  +F+E+  ++ ++WN L+S  AQ+G  +  LK F  M QSG + +  + +S LSA
Sbjct: 497 IREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            ++   I++G Q  ++   K     + E   +++ +  + G F++A+   ++M  E +E+
Sbjct: 557 SANLAEIKQGKQ-IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEV 614

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFK 573
            W+++I SC  H     A    DQ+ K
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKK 641



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 275/530 (51%), Gaps = 16/530 (3%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRTDGGSDPDYVTFATLLSGCSEPDTAN 90
           M  R A S    + G+       +   LF D  R  GG  P  + FA  L  C       
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58

Query: 91  ELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           +++ ++HA  +  G     I+ N L+D Y K   +  ARRVF+E+  +D+VS+ A+++G+
Sbjct: 59  QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+ GL EEA+ L+ +M   G  P+ +  ++ LS+       A GR +HA   K  F   +
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV NA++ LY +      A ++F +MP  D V++N +I+ +A     + +L++F E+QF+
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                    S+LL+  A+  DLQ G Q+H+        S+  +  SL+D+Y KCG  E A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF +    + V W  M+ A+ Q  +L ++  LF +M  A I  +Q T+  ILR     
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             + LG+Q+HS  +++GF S+++    L+DMY+K G L+ A +  + + E+++VSW ++I
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-----YFNSMT 504
           +   Q+   +  L +F++M + G  PD++ L S +S C+    + +GLQ     Y +  +
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS 478

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               +      + ++V++  R G   EA     ++  + DEI W+ +++ 
Sbjct: 479 GDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSG 521



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 3/352 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           + +LI  Y K G L  AR +   + ++  VSWT +I GY Q    ++A   F +M+   G
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ-KCG 441

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD +  A+ +SGC+  +   + +Q+HA I   GY+  + I N+LV+ Y +   +  A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F+E+  KD +++N L++GFA+ GL+EEA+K+F+ M   G K + FTF +ALSA   LA
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +I  G+Q+HA V+KT       V NAL+ LY K     +A+  F EM E + VS+N +IT
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             + + +  E+L LF +++      +   F  +L+  ++   ++ G            I 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 309 EVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 + ++D++ + G+ + AK+    +      + W  ++SA     N+E
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/623 (39%), Positives = 370/623 (59%), Gaps = 34/623 (5%)

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
             R +F E+P+K+ V FN +I  +    L  +A+ +F  M   G  P  +T+   L A  G
Sbjct: 1079 TRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSG 1138

Query: 187  LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              D+ +G Q+HA VV+     NVFV N L+ +Y K  C+VEA ++  ZMP  D VS+N +
Sbjct: 1139 SEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSL 1198

Query: 247  ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +   A N Q+ ++L++ +E++           ++LL  V N                 T 
Sbjct: 1199 VAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTN-----------------TC 1241

Query: 307  ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            +  V                   KE+F  L++ S V W  MI+ Y+      EA+++F++
Sbjct: 1242 LDNVSFV----------------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQ 1285

Query: 367  MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            M    +  D  + AS+L A  +L++L LG+++H +V+R     N+   +AL+DMYAK G 
Sbjct: 1286 MEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGC 1345

Query: 427  LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
            L+ A + F +M  R++VSW ++ISA   NG  +  +  F  M   G  PDS++ +SVLSA
Sbjct: 1346 LEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSA 1405

Query: 487  CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            CSH GL++EG  YF  MT++ K+ P+ EH+  MVD+L R+G  DEA   + QMP EP+E 
Sbjct: 1406 CSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNER 1465

Query: 547  MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            +W +++++CR++ N+     AADQLF++     +  YV +SNIYA AG+WE V+ V+  M
Sbjct: 1466 VWGALLSACRVYSNMIIGLLAADQLFQLCP-EQSGYYVLLSNIYAKAGRWEDVTTVRSIM 1524

Query: 607  RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
            + +G++K+   S  EL ++VH F A D+ HPQ+ +I  +++ L+ +MK+ GY P+T  AL
Sbjct: 1525 KTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSAL 1584

Query: 667  HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            HD +EE K   L  HSE+LAIAFA++NT  GSPI + KNLR C DCH A KLISKI GRE
Sbjct: 1585 HDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGRE 1644

Query: 727  ITVRDSSRFHHFKDGFCSCRDFW 749
            IT+RD++RFHHF +G CSC D+W
Sbjct: 1645 ITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 36/443 (8%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  Y   G   + R +F+ +  +  V + ++I  Y   + + +A  +F +M    G DP
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM-AGHGIDP 1124

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            D+ T+  +L   S  +     +Q+HA +++ G +  + + N L+  Y K  CL  A RV 
Sbjct: 1125 DHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 1184

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             ZMP +D VS+N+L+ G A+ G  ++A+++  EM+ LG KP   T A+ L A        
Sbjct: 1185 DZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------- 1236

Query: 192  LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                               V N  L      D V   +++F ++     VS+NVMI  Y 
Sbjct: 1237 -------------------VTNTCL------DNVSFVKEMFMKLANKSLVSWNVMIAVYM 1271

Query: 252  WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             N    E++ +F +++    D      +++L    +   L +GR+IH   +       + 
Sbjct: 1272 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 1331

Query: 312  VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            + N+L+DMYAKCG  E A+E+F  +     V WT+MISAY   G   +A++LF  M    
Sbjct: 1332 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 1391

Query: 372  ISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDA 430
            ++ D   F S+L A +    L  G+     +      +  +     ++D+  ++G + +A
Sbjct: 1392 LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEA 1451

Query: 431  IQTFKEMP-ERNIVSWNALISAC 452
                K+MP E N   W AL+SAC
Sbjct: 1452 YGFIKQMPMEPNERVWGALLSAC 1474



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 46/361 (12%)

Query: 290  DLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            D++  +++H++  +   + S   +   L+  YA CG     + IF  +   + V +  MI
Sbjct: 1039 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 1098

Query: 349  SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
             +YV      +AL +F  M    I  D  T+  +L+AS+    L +G Q+H+ V+R G  
Sbjct: 1099 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 1158

Query: 409  SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
             NVF G+ L+ MY K G L +A +   ZMP R++VSWN+L++ CA+NG     L+  ++M
Sbjct: 1159 LNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 1218

Query: 469  VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
               G +PD+ ++ S+L A ++  L  + + +   M  K   +     +  M+ +   +  
Sbjct: 1219 ELLGLKPDAGTMASLLPAVTNTCL--DNVSFVKEMFMKLANKSLVS-WNVMIAVYMNNSM 1275

Query: 529  FDEAEKLMAQM---PFEPDEIMWSSVINSC----------RIHKN--------------- 560
              EA  +  QM     +PD I  +SV+ +C          RIH+                
Sbjct: 1276 PAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 1335

Query: 561  ----------LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
                      LE+A++  DQ+    K RD   + +M + Y + G+      +   M++ G
Sbjct: 1336 LIDMYAKCGCLEYAREVFDQM----KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 1391

Query: 611  V 611
            +
Sbjct: 1392 L 1392



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 42/351 (11%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            N    N LIS Y K G L  A  + + M  R  VSW  L+ G ++  QF +A ++  +M 
Sbjct: 1160 NVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEME 1219

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
               G  PD  T A+LL                             + N+ +D+      +
Sbjct: 1220 L-LGLKPDAGTMASLLPA---------------------------VTNTCLDN------V 1245

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
               + +F ++  K  VS+N +I  +    +  EA+ +F++M+     P   + A+ L A 
Sbjct: 1246 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              L+ + LGR++H +VV+     N+ + NAL+D+Y+K  C+  AR++F +M   D VS+ 
Sbjct: 1306 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 1365

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR-QIHTQTIV 303
             MI+ Y  N + ++++ LF  +Q    +     F ++LS  ++   L  GR      T  
Sbjct: 1366 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 1425

Query: 304  TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
               +  ++    +VD+  + G+ +EA   +  +  +   P    W A++SA
Sbjct: 1426 CKIVPRIEHFVCMVDLLGRAGQVDEA---YGFIKQMPMEPNERVWGALLSA 1473


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/776 (33%), Positives = 431/776 (55%), Gaps = 38/776 (4%)

Query: 10  NMLISGYVKSGNLAT---ARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVDMR 64
           N LI+  V+ G L +   AR  F       A    +  LI GY+      +A  L+V M 
Sbjct: 63  NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD  TF  LLS CS+    +E +QVH  ++K G    + + NSL+  Y +   +
Sbjct: 123 V-MGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKV 181

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           DL R++F  M +++ VS+ +LI G++   L++EA+ LF +M   G +P+  T    +SA 
Sbjct: 182 DLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISAC 241

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+ LG++V +++ +     +  + NAL+D+Y K   +  AR++F E    + V YN
Sbjct: 242 AKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYN 301

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +++ Y  +E   + L +  E+        +    + ++  A   DL +G+  H   +  
Sbjct: 302 TIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN 361

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE------ 358
                  ++N+++DMY KCG+ E A ++F ++ + + V W ++I+  V+ G++E      
Sbjct: 362 GLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIF 421

Query: 359 -------------------------EALNLFIEMCRANISADQATFASILRASAELASLS 393
                                    EA+ LF EM    I  D+ T   I  A   L +L 
Sbjct: 422 DEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALD 481

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           L K + +++ ++    ++  G+AL+DM+++ G    A+  FK M +R++ +W A I   A
Sbjct: 482 LAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMA 541

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
             G+ +  ++ F +M++   +PD V  +++L+ACSH G +++G Q F SM + + +RP  
Sbjct: 542 MEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHI 601

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
            HY  MVD+L R+G  +EA  L+  MP EP++++W S++ +CR HKN+E A  AA++L +
Sbjct: 602 VHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQ 661

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
           +   R    +V +SNIYA AG+W  V++V+  M+E+GV+KV   S +E++  +H FT+ D
Sbjct: 662 LAPER-VGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGD 720

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
           E H +   I   +E +   + + GY PDT+  L D DE+ K   L  HSE+LA+A+ LI 
Sbjct: 721 ESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLIT 780

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           T +G PI V+KNLR C+DCH+  KL+SK+  REITVRD++R+H FK+GFCSCRD+W
Sbjct: 781 TGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 241/510 (47%), Gaps = 36/510 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI  Y + G +   R+LF+ M++R  VSWT LI GYS ++  +EA  LF  M  + G
Sbjct: 168 SNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQM-GEAG 226

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +P+ VT   ++S C++        +V + I + G     I+ N+LVD Y K   +  AR
Sbjct: 227 VEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAAR 286

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F E   K+ V +N +++ +       + + +  EM   G +P   T  + ++A   L 
Sbjct: 287 QIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLG 346

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSK--------------------------- 221
           D+++G+  HA+V++        ++NA++D+Y K                           
Sbjct: 347 DLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIA 406

Query: 222 ---HDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
               D  +E A ++F EM E D VS+N MI        ++E+++LFRE+Q       +  
Sbjct: 407 GLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVT 466

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              + S       L + + + T         ++++  +LVDM+++CG    A  +F  + 
Sbjct: 467 MVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME 526

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
                 WTA I     +GN E A+ LF EM    +  D   F ++L A +   S+  G+Q
Sbjct: 527 KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQ 586

Query: 398 LH-SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQN 455
           L  S     G   ++     ++D+  ++G L++A+   + MP E N V W +L++AC ++
Sbjct: 587 LFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKH 646

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            + +    + E + Q    P+ V +  +LS
Sbjct: 647 KNVELAHYAAEKLTQ--LAPERVGIHVLLS 674



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 171/389 (43%), Gaps = 34/389 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T+  N L+  Y+K G++  AR++F+   ++  V +  ++  Y   +++     + +D  
Sbjct: 265 STIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVH-HEWASDVLVILDEM 323

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD VT  + ++ C++    +     HA +++ G      I N+++D Y K    
Sbjct: 324 LQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKR 383

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEG------------------------------- 153
           + A +VF+ MP K  V++N+LI G  ++G                               
Sbjct: 384 EAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVS 443

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           + EEAI+LF EMQ+ G      T     SA   L  + L + V  ++ K +   ++ +  
Sbjct: 444 MFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGT 503

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+D++S+      A  +F  M + D  ++   I   A     + +++LF E+   +   
Sbjct: 504 ALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKP 563

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA-NSLVDMYAKCGRFEEAKEI 332
               F  LL+  ++   +  GRQ+         I    V    +VD+  + G  EEA ++
Sbjct: 564 DDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL 623

Query: 333 FANLS-HISTVPWTAMISAYVQKGNLEEA 360
             ++    + V W ++++A  +  N+E A
Sbjct: 624 IQSMPIEPNDVVWGSLLAACRKHKNVELA 652



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN+  V+ N LI+G V+ G++  A  +F+ M++R  VSW  +IG   Q + F EA +LF
Sbjct: 393 MPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELF 452

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+   G   D VT   + S C      +    V   I K   +  L +  +LVD +  
Sbjct: 453 REMQNQ-GIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFS- 510

Query: 121 IRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            RC D   A  VFK M ++D  ++ A I   A EG  E AI+LF EM     KP D  F 
Sbjct: 511 -RCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A L+A      +  GRQ+   + K + +  ++     ++DL  +   + EA  L   MP
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/682 (37%), Positives = 407/682 (59%), Gaps = 18/682 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L S C     A  +     D   F +N+       L+ +Y K   +++A ++F EMP
Sbjct: 49  FLLLYSKCRRLSAARRVFDHTHDCNVFSFNT-------LISAYAKESYVEVAHQLFDEMP 101

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q DSVS+N LI  +A+ G  + A +LF+EM+        FT +  ++A  G+ ++ L RQ
Sbjct: 102 QPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITA-CGI-NVGLIRQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVSYNVMITCYAWNE 254
           +HA  V T     V V NAL+  YSK+  + EAR++F  + E  D VS+N M+  Y  + 
Sbjct: 160 LHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR 219

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ++L+L+ E+         F  +++L+   N  DL  G Q H + I +       V +
Sbjct: 220 EGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGS 279

Query: 315 SLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNL-EEALNLFIEMCRANI 372
            L+D+Y+KCG    + +++F  +S+   V W  MIS Y    +L +EAL  F ++     
Sbjct: 280 GLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGH 339

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAI 431
             D  +   ++ A + ++S S G+Q+H   ++    SN  S  +AL+ MY+K G+L+DA 
Sbjct: 340 RPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAK 399

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  MPE N VS+N++I+  AQ+G    +L  F+ M++ G+ P +++ +SVL+AC+H G
Sbjct: 400 TLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTG 459

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E+G  YFN M QK+ + P+  H++ M+D+L R+G   EAE+L+  +PF+P    WS++
Sbjct: 460 RVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSAL 519

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CRIH N+E A KAA++L +++ L +AAPYV ++NIY+  G+ +  + V+K MR+RGV
Sbjct: 520 LGACRIHGNVELAIKAANRLLQLDPL-NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGV 578

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SW+E+  ++H+F A D  HP   +I+  +E +M+++KK GY P+   AL   D+
Sbjct: 579 KKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDD 638

Query: 672 EI--KVESLK--YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            +  + E L+  +HSE+LA++F L++T EG PILV KNLR C DCH AIK IS++  REI
Sbjct: 639 RVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREI 698

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
           TVRDS RFH FKDG CSC  +W
Sbjct: 699 TVRDSHRFHCFKDGQCSCGGYW 720



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 251/473 (53%), Gaps = 11/473 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N LIS Y K   +  A +LF+ M    +VS+  LI  Y+++   + AF+LF++MR
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +   D D  T + +++ C        + Q+HA  +  G +S + + N+L+ SY K   L
Sbjct: 133 -EAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189

Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             ARR+F  + + +D VS+N+++  + +     +A++L++EM   G     FT A+ L+A
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVS 242
              + D+  G Q HA ++K+ + +N  V + L+DLYSK   C+++ RK+F E+   D V 
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309

Query: 243 YNVMITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +N MI+ Y+  E    E+L+ FR+LQ             ++S  +N      GRQ+H   
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 302 I-VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           + +    + + V N+L+ MY+KCG   +AK +F  +   +TV + +MI+ Y Q G   ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALL 418
           L+LF  M     +    TF S+L A A    +  GK ++  +++  F     +G  S ++
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMI 488

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           D+  ++G L +A +  + +P +     W+AL+ AC  +G+ +  +K+   ++Q
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 37/317 (11%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF----------- 326
           F   L       DL+ G+ +H   I +   +   ++N  + +Y+KC R            
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 327 --------------------EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                               E A ++F  +    +V +  +I+AY ++G+ + A  LF+E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  A +  D  T + I+ A     ++ L +QLH+  + +G  S V  G+AL+  Y+K+G 
Sbjct: 131 MREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188

Query: 427 LKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           LK+A + F  + E R+ VSWN+++ A  Q+ +    L+ + +M   G   D  +L SVL+
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR-SGCFDEAEKLMAQMPFEPD 544
           A ++   +  GLQ F++   K          + ++D+  +  GC  +  K+  ++   PD
Sbjct: 249 AFTNVQDLLGGLQ-FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS-NPD 306

Query: 545 EIMWSSVINSCRIHKNL 561
            ++W+++I+   ++++L
Sbjct: 307 LVLWNTMISGYSLYEDL 323



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+      N LI+ Y K GNL  A+ LF++M +   VS+  +I GY+Q     ++  LF
Sbjct: 374 IPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLF 433

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII--KFGYNSILIICNSLVDSY 118
             M  + G  P  +TF ++L+ C+      +  +++ +++  KFG        + ++D  
Sbjct: 434 QRM-LEMGFTPTNITFISVLAACAHTGRVED-GKIYFNMMKQKFGIEPEAGHFSCMIDLL 491

Query: 119 CKIRCLDLARRVFKEMPQKDSVSF-NALITGFAKEGLNEEAIK 160
            +   L  A R+ + +P      F +AL+      G  E AIK
Sbjct: 492 GRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIK 534


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/725 (36%), Positives = 411/725 (56%), Gaps = 5/725 (0%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR LF S+       + +LI G+S       +   +  +  +    PD  T+A  +S  +
Sbjct: 59  ARALFFSVPKPDIFLFNVLIKGFSFSPD-ASSISFYTHLLKNTTLSPDNFTYAFAIS--A 115

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
            PD  N  + +HA  +  G++S L + ++LVD YCK   +  AR+VF +MP +D+V +N 
Sbjct: 116 SPDD-NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNT 174

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +ITG  +    ++++++F +M   G +    T A  L A   + ++ +G  +    +K  
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  + +V   L+ ++SK + V  AR LFG + + D VSYN +I+ ++ N + + ++K FR
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           EL  +    S      L+ V +    L +   I    + +  I +  V+ +L  +Y++  
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLN 354

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             + A+++F   S  +   W AMIS Y Q G  E A++LF EM     + +  T  SIL 
Sbjct: 355 EIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILS 414

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A A+L +LS GK +H  +       N++  +AL+DMYAK G++ +A Q F    E+N V+
Sbjct: 415 ACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVT 474

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN +I     +G     LK F +M+  G+QP SV+ LSVL ACSH GL+ EG + F++M 
Sbjct: 475 WNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMV 534

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            KY++ P  EHYA MVDIL R+G  ++A + + +MP EP   +W +++ +C IHK+   A
Sbjct: 535 NKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLA 594

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           + A+++LF+++   +   YV +SNIY+V   +   + V++A+++R + K    + +E+  
Sbjct: 595 RVASERLFELDP-GNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNG 653

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
             HVF   D  H QT  I  K+E L  +M++ GY+ +T  ALHD +EE K      HSE+
Sbjct: 654 TPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEK 713

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LAIAF LI T  G+ I ++KNLR C DCHAA K ISKIT R I VRD++RFHHFKDG CS
Sbjct: 714 LAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICS 773

Query: 745 CRDFW 749
           C D+W
Sbjct: 774 CGDYW 778



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 265/577 (45%), Gaps = 65/577 (11%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           TLL+  S+  T   L + HA +I+ GY   L     L      +     AR +F  +P+ 
Sbjct: 10  TLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKP 69

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           D   FN LI GF+    +  +I  +   +++    P +FT+A A+SA     D  LG  +
Sbjct: 70  DIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISAS---PDDNLGMCL 125

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           HA  V   F  N+FVA+AL+DLY K   V  ARK+F +MP+ D V +N MIT    N  Y
Sbjct: 126 HAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCY 185

Query: 257 KESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            +S+++F+++  Q  R D +    +T+L  VA   ++++G  I    +      +  V  
Sbjct: 186 DDSVQVFKDMVAQGVRLDSTT--VATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLT 243

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
            L+ +++KC   + A+ +F  +     V + A+IS +   G  E A+  F E+  +    
Sbjct: 244 GLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV 303

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             +T   ++  S+    L L   +  F ++SG +      +AL  +Y++   +  A Q F
Sbjct: 304 SSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLF 363

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH----- 489
            E  E+ + +WNA+IS  AQ+G  +  +  F++M+ + + P+ V++ S+LSAC+      
Sbjct: 364 DESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALS 423

Query: 490 ------------------------------CGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
                                         CG I E  Q F+  ++K  +      + +M
Sbjct: 424 FGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVT-----WNTM 478

Query: 520 VDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF---- 572
           +      G  DEA KL   M  + F+P  + + SV+ +C  H  L    +  D++F    
Sbjct: 479 IFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACS-HAGL---VREGDEIFHAMV 534

Query: 573 ---KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
              ++E L  A  Y  M +I   AGQ E   +  + M
Sbjct: 535 NKYRIEPL--AEHYACMVDILGRAGQLEKALEFIRKM 569



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 232/486 (47%), Gaps = 7/486 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K   +A AR++F+ M DR  V W  +I G  +   + ++ ++F D
Sbjct: 135 DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKD 194

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G   D  T AT+L   +E       + +    +K G++    +   L+  + K  
Sbjct: 195 MVAQ-GVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCE 253

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR +F  + + D VS+NALI+GF+  G  E A+K F E+   G + S  T    + 
Sbjct: 254 DVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIP 313

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                  + L   +  F VK+  +    V+ AL  +YS+ + +  AR+LF E  E    +
Sbjct: 314 VSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAA 373

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ YA +   + ++ LF+E+  T F  +    +++LS  A    L  G+ +H Q I
Sbjct: 374 WNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVH-QLI 432

Query: 303 VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            +  + + + V+ +L+DMYAKCG   EA ++F   S  +TV W  MI  Y   G  +EAL
Sbjct: 433 KSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEAL 492

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDM 420
            LF EM          TF S+L A +    +  G ++ H+ V +          + ++D+
Sbjct: 493 KLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDI 552

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
             ++G L+ A++  ++MP E     W  L+ AC  + D      + E + +    P +V 
Sbjct: 553 LGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFE--LDPGNVG 610

Query: 480 LLSVLS 485
              +LS
Sbjct: 611 YYVLLS 616


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/753 (36%), Positives = 423/753 (56%), Gaps = 19/753 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            +V  N+L+  Y   G +A+A  LF  M +R  VSW   I   +Q      A +LF  M+
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQ 220

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G   P  +T    L+ C+   T  +   +H  + + G    L++  +L  +Y ++  L
Sbjct: 221 LEG-VRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHL 276

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ VF    ++D VS+NA++  +A+ G   EA  LF  M H G  PS  T    ++A 
Sbjct: 277 YQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNAS 333

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G + +  GR +H   ++     ++ + NALLD+Y++     EAR LF  +P  + VS+N
Sbjct: 334 TGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWN 392

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD----LQIGRQIHTQ 300
            MI   +   Q K +++LF+ +Q       +  +  LL  VA+  +    +  GR++H++
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF---ANLSHISTVPWTAMISAYVQKGNL 357
            +     SE  +  ++V MYA CG  +EA   F   A       V W A+IS+  Q G+ 
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           + AL  F  M    ++ +Q T  ++L A A  A+L+ G+ +H  +  SG  SN+F  +AL
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATAL 572

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
             MY + GSL+ A + F+++  ER++V +NA+I+A +QNG A   LK F  M Q G +PD
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             S +SVLSACSH GL +EG + F SM Q Y + P ++HYA  VD+L R+G   +AE+L+
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELI 692

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             M  +P  ++W +++ +CR +++++  + A   + +++   D + YV +SNI A AG+W
Sbjct: 693 RCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP-GDESAYVVLSNILAGAGKW 751

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  ++V+  M  RG+RK    SW+E+KS+VH F A D  HP++ EI R++E L  E+++ 
Sbjct: 752 DEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREI 811

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT   L   DE  K   L  HSERLAIA  ++++   + + VMKNLR C DCH A 
Sbjct: 812 GYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNAT 870

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISKI  +EI VRD+ RFHHF DG CSC D+W
Sbjct: 871 KFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 281/550 (51%), Gaps = 17/550 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y+K  +L    E+F+ +  R   SWT +I  Y++  Q + A  +F  M+ + G 
Sbjct: 66  NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQE-GV 124

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D VTF  +L  C+     ++   +HA I++ G     ++ N L+  Y    C+  A  
Sbjct: 125 RCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAML 184

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F++M ++D VS+NA I   A+ G    A++LF  MQ  G +P+  T   AL+     A 
Sbjct: 185 LFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTV---CAT 240

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I   + +H  V ++   + + V+ AL   Y++   + +A+++F    E D VS+N M+  
Sbjct: 241 IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA +    E+  LF  +       S+    TL++       L+ GR IH   +      +
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKV---TLVNASTGCSSLRFGRMIHGCALEKGLDRD 357

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + + N+L+DMY +CG  EEA+ +F  +   + V W  MI+   QKG ++ A+ LF  M  
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQL 416

Query: 370 ANISADQATFASILRASA----ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
             ++  +AT+ ++L A A    E  +++ G++LHS ++  G+ S    G+A++ MYA  G
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476

Query: 426 SLKDAIQTFKE--MPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           ++ +A  +F+   M +R ++VSWNA+IS+ +Q+G  +  L  F  M   G  P+ ++ ++
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVA 536

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL AC+    + EG +  +   +   +        ++  +  R G  + A ++  ++  E
Sbjct: 537 VLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595

Query: 543 PDEIMWSSVI 552
            D ++++++I
Sbjct: 596 RDVVIFNAMI 605



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 241/529 (45%), Gaps = 33/529 (6%)

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + G + P ++    LL    +    ++  ++HA I+  G    L   N L+  Y K   L
Sbjct: 23  SSGATRPAHLV--RLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESL 78

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                VF  +  +D  S+  +IT + + G  + AI +F  MQ  G +    TF A L A 
Sbjct: 79  GDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKAC 138

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D++ GR +HA++V++       +AN LL +Y    CV  A  LF +M E D VS+N
Sbjct: 139 ARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWN 197

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             I   A +     +L+LF+ +Q      ++      L+V A    ++  + IH     +
Sbjct: 198 AAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRES 254

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V+ +L   YA+ G   +AKE+F   +    V W AM+ AY Q G++ EA  LF
Sbjct: 255 GLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    IS  + T   ++ AS   +SL  G+ +H   +  G   ++  G+ALLDMY + 
Sbjct: 315 ARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRC 371

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS ++A   FK +P  N VSWN +I+  +Q G  +  ++ F+ M   G  P   + L++L
Sbjct: 372 GSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLL 430

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPK--KEHYAS-------MVDILCRSGCFDEAEKL 535
            A      +    +   +M +  KL  +     YAS       +V +    G  DEA   
Sbjct: 431 EA------VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAAS 484

Query: 536 MAQMPFEP--DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             +   E   D + W+++I+S   H +     K A   F+   L   AP
Sbjct: 485 FQRGAMEDRHDVVSWNAIISSLSQHGH----GKRALGFFRRMDLHGVAP 529



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 221/464 (47%), Gaps = 15/464 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q  V +  L S Y + G+L  A+E+F+   +R  VSW  ++G Y+Q     EA  LF  M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             +G S P  VT     +GCS          +H   ++ G +  +++ N+L+D Y +   
Sbjct: 318 LHEGIS-PSKVTLVNASTGCSSLRFGR---MIHGCALEKGLDRDIVLGNALLDMYTRCGS 373

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            + AR +FK +P  ++VS+N +I G +++G  + A++LF  MQ  G  P   T+   L A
Sbjct: 374 PEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432

Query: 184 GVGLAD----IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--GEMPE 237
                +    +A GR++H+ +V   +     +  A++ +Y+    + EA   F  G M +
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 238 V-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
             D VS+N +I+  + +   K +L  FR +       +Q     +L   A    L  G  
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI 552

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           +H     +   S + VA +L  MY +CG  E A+EIF  ++     V + AMI+AY Q G
Sbjct: 553 VHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSG 414
              EAL LF  M +     D+ +F S+L A +       G ++   + +S G   +    
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
           +  +D+  ++G L DA +  + M  +  ++ W  L+ AC +  D
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRD 716


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/698 (35%), Positives = 407/698 (58%), Gaps = 2/698 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +I+ Y++ G+   A  +F  M  R  V++  LI G++Q      A ++F +M+  G S
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VT ++LL+ C+      +  Q+H+ + K G +S  I+  SL+D Y K   ++ A  
Sbjct: 242 -PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F    + + V +N ++  F +     ++ +LF +MQ  G +P+ FT+   L       +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I LG Q+H+  VKT F  +++V+  L+D+YSK+  + +AR++   + E D VS+  MI  
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +E  K++L  F+E+Q           ++ +S  A    ++ G QIH +  V+    +
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V + N+LV++YA+CGR  EA   F  + H   + W  ++S + Q G  EEAL +F+ M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + +  +  TF S L ASA LA +  GKQ+H+ VI++G       G+AL+ +Y K GS +D
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F EM ERN VSWN +I++C+Q+G     L  F+ M + G +P+ V+ + VL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEGL YF SM+ +Y +RP+ +HYA ++DI  R+G  D A+K + +MP   D ++W 
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV  +W +  QV+K MR+R
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEP-HDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GVRK    SW+E+K+ VH F   D LHP   +I   +  +   + K GYK +     HD+
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDK 839

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
           ++E +  +   HSE+LA+ F L++ P   P+ V+KNLR
Sbjct: 840 EQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLR 877



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 302/567 (53%), Gaps = 3/567 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +  N+LI  Y K+G +  AR +F  +  R  VSW  ++ GY+Q     EA  L+  M   
Sbjct: 78  IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G     YV  +++LS C++ +   +   +HA   K G+ S + + N+++  Y +     L
Sbjct: 138 GVVPTPYV-LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL 196

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A RVF +MP +D+V+FN LI+G A+ G  E A+++F EMQ  G  P   T ++ L+A   
Sbjct: 197 AERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACAS 256

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  G Q+H+++ K     +  +  +LLDLY K   V  A  +F      + V +N+M
Sbjct: 257 LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  +       +S +LF ++Q      +QF +  +L       ++ +G QIH+ ++ T  
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++ V+  L+DMY+K G  E+A+ +   L     V WT+MI+ YVQ    ++AL  F E
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M +  I  D    AS +   A + ++  G Q+H+ +  SG+  +V   +AL+++YA+ G 
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +++A  +F+E+  ++ ++WN L+S  AQ+G  +  LK F  M QSG + +  + +S LSA
Sbjct: 497 IREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            ++   I++G Q  ++   K     + E   +++ +  + G F++A+   ++M  E +E+
Sbjct: 557 SANLAEIKQGKQ-IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEV 614

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFK 573
            W+++I SC  H     A    DQ+ K
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKK 641



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 275/530 (51%), Gaps = 16/530 (3%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRTDGGSDPDYVTFATLLSGCSEPDTAN 90
           M  R A S    + G+       +   LF D  R  GG  P  + FA  L  C       
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58

Query: 91  ELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           +++ ++HA  +  G     I+ N L+D Y K   +  ARRVF+E+  +D+VS+ A+++G+
Sbjct: 59  QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+ GL EEA+ L+ +M   G  P+ +  ++ LS+       A GR +HA   K  F   +
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV NA++ LY +      A ++F +MP  D V++N +I+ +A     + +L++F E+QF+
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                    S+LL+  A+  DLQ G Q+H+        S+  +  SL+D+Y KCG  E A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF +    + V W  M+ A+ Q  +L ++  LF +M  A I  +Q T+  ILR     
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             + LG+Q+HS  +++GF S+++    L+DMY+K G L+ A +  + + E+++VSW ++I
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-----YFNSMT 504
           +   Q+   +  L +F++M + G  PD++ L S +S C+    + +GLQ     Y +  +
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS 478

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               +      + ++V++  R G   EA     ++  + DEI W+ +++ 
Sbjct: 479 GDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSG 521



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 185/352 (52%), Gaps = 3/352 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           + +LI  Y K G L  AR +   + ++  VSWT +I GY Q    ++A   F +M+   G
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK-CG 441

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD +  A+ +SGC+  +   + +Q+HA I   GY+  + I N+LV+ Y +   +  A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F+E+  KD +++N L++GFA+ GL+EEA+K+F+ M   G K + FTF +ALSA   LA
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +I  G+Q+HA V+KT       V NAL+ LY K     +A+  F EM E + VS+N +IT
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             + + +  E+L LF +++      +   F  +L+  ++   ++ G            I 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 309 EVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 + ++D++ + G+ + AK+    +      + W  ++SA     N+E
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 441/760 (58%), Gaps = 27/760 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           + + V  N L++ Y K G +  AR +F+ M   R  VSWT +    ++    RE+ +L  
Sbjct: 73  DTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLG 132

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-----KFGY--NSILIICNSL 114
           +M   G   P+  T       C       EL ++   ++     K G+    + + C +L
Sbjct: 133 EMLELG-LRPNAFTLCAAARAC----FPQELFRLAGGVVLGFVLKTGFWGTDVSVGC-AL 186

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           +D + +   L  A+RVF  + ++ SV +  LIT + + G   + ++LF+ M   GF+P  
Sbjct: 187 IDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDG 246

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKL 231
           ++ ++ +SA   L  + LG+Q+H+  ++   V +  V+  L+D+Y+K      +  ARK+
Sbjct: 247 YSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKV 306

Query: 232 FGEMPEVDGVSYNVMITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           F  MP  + +S+  +I+ Y  +  Q    + LFRE+       +   +S LL   AN  D
Sbjct: 307 FKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSD 366

Query: 291 LQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
              GRQIH   ++ T+I+ V  V N+LV MYA+ G  EEA++ F  L   + +     +S
Sbjct: 367 QDSGRQIHAH-VLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILS----MS 421

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
             V+      + +  IE     +S    TFAS+L A+A +  L+ G++LH+  +++GF S
Sbjct: 422 PDVETERNNASCSSKIEGMDDGVST--FTFASLLSAAASVGLLTKGQKLHALSMKAGFRS 479

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +    ++L+ MYA+ G L+DA + F EM + N++SW ++IS  A++G A+  L  F DM+
Sbjct: 480 DQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMI 539

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
            +G +P+ V+ ++VLSACSH GL++EG ++F SM + + L P+ EHYA +VD+L RSG  
Sbjct: 540 LAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLV 599

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           +EA + + +MP + D ++W +++++CR + N E  + AA+ +  +E  RD APYV +SN+
Sbjct: 600 EEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEP-RDPAPYVLLSNL 658

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG W+ V++++  MR++ + K T  SW+++ + +H F A D  HP   +I  K+  L
Sbjct: 659 YADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTL 718

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
           ++E+K  GY PDTS  LHD  EE+K + L  HSE++A+AF LI T    P+ + KNLR C
Sbjct: 719 IREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVC 778

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH+AIK ISK TGREI +RDS+RFH  KDG CSC ++W
Sbjct: 779 ADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 194/381 (50%), Gaps = 19/381 (4%)

Query: 173 SDFTFAAA--LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEAR 229
           SD +  AA  L++     D+ LGR +H  ++++  ++ +  VAN+LL +YSK   V  AR
Sbjct: 37  SDHSCDAAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAAR 96

Query: 230 KLFGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           ++F +M  V D VS+  M +C A N   +ESL+L  E+       + F           +
Sbjct: 97  RVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQ 156

Query: 289 LDLQIGRQIHTQTIVTTAI--SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
              ++   +    ++ T    ++V V  +L+DM+A+ G    A+ +F  L   ++V WT 
Sbjct: 157 ELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTL 216

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           +I+ YVQ G   + + LF+ M       D  + +S++ A  EL S+ LG+QLHS  +R G
Sbjct: 217 LITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLG 276

Query: 407 FMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
            +S+      L+DMYAK     S++ A + FK MP  N++SW ALIS   Q+G  +  + 
Sbjct: 277 LVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVM 336

Query: 464 S-FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY----AS 518
           + F +M+    +P+ ++  ++L AC++    + G Q        + L+    H      +
Sbjct: 337 ALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQ-----IHAHVLKTSIAHVNVVGNA 391

Query: 519 MVDILCRSGCFDEAEKLMAQM 539
           +V +   SGC +EA K   Q+
Sbjct: 392 LVSMYAESGCMEEARKAFDQL 412


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/786 (34%), Positives = 430/786 (54%), Gaps = 53/786 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +++GY  S  +  AR LF  M +R  VSWT++I GY +     +A+ +F
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G   PD   FA+ LS        + L  +    +K G+   ++I  ++++ Y +
Sbjct: 213 CKMHREG-LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 121 -IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               LD A + F+ M +++  +++ +I   +  G  + AI ++         P   + A 
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER------DPVK-SIAC 324

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMPEV 238
             +   GLA    GR   A ++     E + V+ NAL+  Y ++  V EA++LF +MP  
Sbjct: 325 RTALITGLAQC--GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + +S+  MI  YA N + +E+L L +EL  +    S    +++    +N + L+ G Q+H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  +           N+L+ MY KC   E A+++F+ +     V W + ++A VQ   L+
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 359 EALNLFIEMCRANISADQATFASILRASAE------------------------------ 388
           EA N F  M    +S D  ++ +I+ A A                               
Sbjct: 503 EARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILL 558

Query: 389 -----LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                L +  +G+Q+H+  I+ G  S +   +AL+ MY K G   D+ + F  M ER+I 
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIF 617

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +WN +I+  AQ+G  +  +K ++ M  +G  P+ V+ + +L+ACSH GL++EG ++F SM
Sbjct: 618 TWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           +Q Y L P  EHYA MVD+L R+G    AE+ +  MP EPD ++WS+++ +C+IHKN E 
Sbjct: 678 SQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEI 737

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            K+AA++LF++E   +A  YV +SNIY+  G W  V++V+K M+++GV K    SW ++K
Sbjct: 738 GKRAAEKLFRIEP-SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIK 796

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
            K+H F   D+ H Q  EI   +E L   +K  GY PDT   LHD DEE K  SL YHSE
Sbjct: 797 DKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSE 856

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+A+ L+ TP+G PI ++KNLR C DCH  IK +S +T R+I +RD +RFHHF++G C
Sbjct: 857 KLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSC 916

Query: 744 SCRDFW 749
           SC DFW
Sbjct: 917 SCEDFW 922



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 255/513 (49%), Gaps = 28/513 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++ N +IS Y  +G    AR+L++++      +  IL+ GY +  +  EA ++F
Sbjct: 60  MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                DG  + + V +  ++S C      N  I +   +     +  +   NS++  YC 
Sbjct: 120 -----DGMLERNTVAWNAMIS-CY---VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR +F++MP+++ VS+  +I+G+ +   + +A  +F +M   G  P    FA+A
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVD 239
           LSA  GL ++ +   +    +KT F  +V +  A+L++YS+   V++ A K F  M E +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIH 298
             +++ MI   +   +   ++ ++           + P  ++    A    L Q GR I 
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYE----------RDPVKSIACRTALITGLAQCGR-ID 339

Query: 299 TQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
              I+   I E  V   N+L+  Y + G   EAKE+F  +   +T+ W  MI+ Y Q G 
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEAL L  E+ R+ +    ++  SI  A + + +L  G Q+HS  ++ G   N F+ +A
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY K  +++ A Q F  M  ++IVSWN+ ++A  QN        +F++M+      D
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----D 515

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
            VS  +++SA +H     E +  F +M  +++L
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL 548



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/516 (22%), Positives = 231/516 (44%), Gaps = 56/516 (10%)

Query: 117 SYCKIRCLDL--------ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           S C  R  DL        AR VF  MP++D +++N++I+ +   G+ + A  L+  +   
Sbjct: 35  SGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI--- 91

Query: 169 GFKPSDFTFAAALSAGVG-LADIALGRQVHAFVVKTN----------FVEN--VFVANAL 215
                +    A L +G G L  +   R+V   +++ N          +V+N  + +A  L
Sbjct: 92  --SGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149

Query: 216 LDLYSKHDC---------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
            D     D                +V+AR LF +MPE + VS+ VMI+ Y   E + ++ 
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
            +F ++        Q  F++ LS V    +L +   +    + T    +V +  +++++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269

Query: 321 AK-CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           ++     + A + F ++   +   W+ MI+A    G ++ A+ ++      +I+   A  
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
             + +      +  L +Q+   +        V S +AL+  Y ++G + +A + F +MP 
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPF 381

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           RN +SW  +I+  AQNG ++  L   +++ +SG  P   SL S+  ACS+   +E G Q 
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQ- 440

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            +S+  K   +       +++ +  +    + A ++ ++M    D + W+S + +   + 
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQND 499

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
            L+ A+   D +      RD   +  + + YA A Q
Sbjct: 500 LLDEARNTFDNMLS----RDDVSWTTIISAYAHAEQ 531



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 115/291 (39%), Gaps = 61/291 (20%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV   ++ +    + GR  EA+E+F  +     + W +MISAY   G  + A +L+    
Sbjct: 33  EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---- 88

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                                 ++S G              N+ +G+ LL  Y + G + 
Sbjct: 89  ---------------------DAISGG--------------NMRTGAILLSGYGRLGRVL 113

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A + F  M ERN V+WNA+IS   QNGD     + F+ M       D  S  S+L+   
Sbjct: 114 EARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGYC 169

Query: 489 HCGLIEEGLQYFNSMTQKYKLR--------PKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           H   + +    F  M ++  +          + E++    DI C+          M +  
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK----------MHREG 219

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
             PD+  ++S +++ +   NL+  +       K    RD     A+ N+Y+
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 11/155 (7%)

Query: 401 FVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           F +R        SG SA +    + G + +A + F  MP R+I++WN++ISA   NG   
Sbjct: 23  FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
           A  +   D +  G       L   LS     G + E  + F+ M ++  +      + +M
Sbjct: 83  AA-RDLYDAISGGNMRTGAIL---LSGYGRLGRVLEARRVFDGMLERNTVA-----WNAM 133

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +    ++G    A +L   MP   D   W+S++  
Sbjct: 134 ISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTG 167


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/742 (34%), Positives = 424/742 (57%), Gaps = 4/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K G +  A ++F+ M +   VSW  +I  +S+    R++F L ++M  + G 
Sbjct: 185 NALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGL 244

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VT  T+L  C+     +  + +H   +K G +  +++ N++V  Y K   L+ A+ 
Sbjct: 245 LPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQM 304

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAGVGL 187
            F +   K+ VS+N +I+ F+ EG   EA  L  EMQ  G   K ++ T    L A +  
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDK 364

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +   +++H +  +  F ++V ++NA +  Y+K   +  A K+F  + +    S+N +I
Sbjct: 365 LQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALI 423

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A N   +++L L  ++ ++      F  S+LL   A+   LQ G++IH   +     
Sbjct: 424 GGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLE 483

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++  V  SL+  Y  CG+   A+ +F  +   + V W AMIS Y Q G   E+L LF + 
Sbjct: 484 TDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKS 543

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I + +    S+  A ++L++L LGK+ H +V+++    + F G +++DMYAKSG +
Sbjct: 544 LSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCI 603

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K++ + F  + ++N+ SWNA+I A   +G  +  ++ +E M + G  PD  + + +L AC
Sbjct: 604 KESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMAC 663

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            H GL+EEGL+YF  M     + PK EHYA ++D+L R+G  D+A +L+ +MP E D  +
Sbjct: 664 GHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRI 723

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           WSS++ SCR    LE  +K A +L ++E  + A  YV +SN+YA  G+W+ V +V++ M+
Sbjct: 724 WSSLLRSCRTFGALEIGEKVAKKLLELEPDK-AENYVLLSNLYAGLGKWDGVRRVRQMMK 782

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           E G++K    SW+E+  +V+ F   D L P++ EIR     L + + + GYKP+TS  LH
Sbjct: 783 EIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLH 842

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           +  EE K++ L+ HSE+LAI+F L+ T +G+ + + KNLR C DCH A KLISK   REI
Sbjct: 843 EVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREI 902

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD+ RFHHF+DG CSC D+W
Sbjct: 903 VVRDNKRFHHFRDGLCSCCDYW 924



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 290/582 (49%), Gaps = 14/582 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y   G+   +R +F++M  +  + W  L+ GY++   + +  K+F+D+ +D    P
Sbjct: 85  LIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQP 144

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF +++  C           +H  +IK G    + + N+LV  Y K   +D A +VF
Sbjct: 145 DNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVF 204

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADI 190
             MP+ + VS+N++I  F++ G + ++  L +EM    G  P   T    L    G  ++
Sbjct: 205 DFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEV 264

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            +G  +H   VK    E V V NA++ +YSK   + EA+  F +    + VS+N MI+ +
Sbjct: 265 DIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAF 324

Query: 251 AWNEQYKESLKLFRELQFT--RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           +      E+  L +E+Q        ++     +L    +KL L+  +++H  +       
Sbjct: 325 SLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSF-RHCFQ 383

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V+++N+ +  YAKCG    A+++F  +   +   W A+I  + Q G+  +AL+L  +M 
Sbjct: 384 HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            +    D  T +S+L A A L SL  GK++H +V+R+G  ++ F G++LL  Y   G   
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKAS 503

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  M ++N+VSWNA+IS  +QNG    +L  F   +  G Q   ++++SV  ACS
Sbjct: 504 SARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACS 563

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPD 544
               +  G +        Y L+  +   A    S++D+  +SGC  E+ K+   +  + +
Sbjct: 564 QLSALRLGKE-----AHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKN 617

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
              W+++I +  IH + + A +  +++ K+ ++ D   Y+ +
Sbjct: 618 VASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGI 659



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 176/597 (29%), Positives = 272/597 (45%), Gaps = 80/597 (13%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHL 168
           +C S +DS          R VF  M  K+ + +NAL++G+ + GL  + +K+F+++    
Sbjct: 91  MCGSPLDS----------RLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDT 140

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
            F+P +FTF + + A  G+ D+ LG  +H  V+K   V +VFV NAL+ +Y K   V EA
Sbjct: 141 DFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEA 200

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP----FSTLLSV 284
            K+F  MPE + VS+N MI  ++ N   ++S  L  E+     +    P      T+L V
Sbjct: 201 MKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM---LGEEGLLPDVVTVVTILPV 257

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A + ++ IG  IH   +      EV V N++V MY+KCG   EA+  F   ++ + V W
Sbjct: 258 CAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSW 317

Query: 345 TAMISAYVQKGNLEEALNLFIEM--CRANISADQATFASILRASAELASLSLGKQLHSFV 402
             MISA+  +G++ EA NL  EM      + A++ T  ++L A  +   L   K+LH + 
Sbjct: 318 NTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYS 377

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            R  F     S + +L  YAK G+L  A + F  + ++ + SWNALI   AQNGD +  L
Sbjct: 378 FRHCFQHVELSNAFIL-AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKAL 436

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH----YAS 518
                M  SG QPD  ++ S+L AC+H     + LQY   +   Y LR   E       S
Sbjct: 437 HLLFQMTYSGQQPDWFTISSLLLACAHL----KSLQYGKEI-HGYVLRNGLETDFFVGTS 491

Query: 519 MVDILCRSGCFDEAEKLMAQM--------------------PFE--------------PD 544
           ++      G    A  L  +M                    P+E                
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSH 551

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           EI   SV  +C     L   K+A   + K  +  DA    ++ ++YA +G  +   +V  
Sbjct: 552 EIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFD 611

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            ++++ V      SW       +       +H    E    IE L + MKK G  PD
Sbjct: 612 GLKDKNVA-----SW-------NAIIVAHGIHGHGKE---AIE-LYERMKKVGQMPD 652



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 232/489 (47%), Gaps = 12/489 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  +  N ++  Y K G L  A+  F    ++  VSW  +I  +S +    EAF L  +
Sbjct: 280 SEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQE 339

Query: 63  MRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M+  G     + VT   +L  C +      L ++H    +  +  +  + N+ + +Y K 
Sbjct: 340 MQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKC 398

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ A +VF  +  K   S+NALI G A+ G   +A+ L  +M + G +P  FT ++ L
Sbjct: 399 GALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLL 458

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   L  +  G+++H +V++     + FV  +LL  Y        AR LF  M + + V
Sbjct: 459 LACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLV 518

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N MI+ Y+ N    ESL LFR+         +    ++    +    L++G++ H   
Sbjct: 519 SWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV 578

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +      +  V  S++DMYAK G  +E++++F  L   +   W A+I A+   G+ +EA+
Sbjct: 579 LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAI 638

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLG----KQLHSFVIRSGFMSNVFSGSAL 417
            L+  M +     D+ T+  IL A      +  G    K++ +F +    + +    + L
Sbjct: 639 ELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY---ACL 695

Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +DM A++G L DA++   EMPE  +   W++L+ +C   G  +   K  + +++   +PD
Sbjct: 696 IDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLE--LEPD 753

Query: 477 SVSLLSVLS 485
                 +LS
Sbjct: 754 KAENYVLLS 762



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 156/304 (51%), Gaps = 5/304 (1%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           DI  GR++H FV  +    N +V N  L+ +Y+     +++R +F  M   + + +N ++
Sbjct: 58  DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117

Query: 248 TCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y  N  Y + +K+F +L   T F    F F +++      LD+++G  IH   I    
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGL 177

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           + +V V N+LV MY KCG  +EA ++F  +   + V W +MI A+ + G   ++ +L +E
Sbjct: 178 VLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLME 237

Query: 367 MC-RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M     +  D  T  +IL   A    + +G  +H   ++ G    V   +A++ MY+K G
Sbjct: 238 MLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCG 297

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG--YQPDSVSLLSV 483
            L +A  +F +   +N+VSWN +ISA +  GD        ++M   G   + + V++L+V
Sbjct: 298 YLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNV 357

Query: 484 LSAC 487
           L AC
Sbjct: 358 LPAC 361



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 155/281 (55%), Gaps = 13/281 (4%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI 339
           LL    N+ D++ GR++H     +T      V N+ L+ MYA CG   +++ +F N+   
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
           + + W A++S Y + G   + + +F+++    +   D  TF S+++A   +  + LG+ +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  VI+ G + +VF G+AL+ MY K G++ +A++ F  MPE N+VSWN++I A ++NG +
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228

Query: 459 QATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           + +     +M+ + G  PD V+++++L  C+  G ++ G+   + +  K  L  +     
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNN 287

Query: 518 SMVDILCRSGCFDEAEKLMAQMPF----EPDEIMWSSVINS 554
           +MV +  + G  +E     AQM F      + + W+++I++
Sbjct: 288 AMVYMYSKCGYLNE-----AQMSFVKNNNKNVVSWNTMISA 323


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/786 (35%), Positives = 422/786 (53%), Gaps = 114/786 (14%)

Query: 76  FATLLSGCSEPDTANELIQ--VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +A  L  CS  D A+  +   VHA +I  G+       N L++ YCK   +  AR++F+E
Sbjct: 14  YAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEE 73

Query: 134 MPQ---------------------------------KDSVSFNALITGFAKEGLNEEAIK 160
           +P                                  +DSV +NA+ITG+A  G    A++
Sbjct: 74  IPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALE 133

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGV-GLADIALGRQVHAFVVKTNF-VENVFVANALLDL 218
           LF  M+   F+P DFTF + LSA V  + +     Q+H  VVKT     +  V NALL +
Sbjct: 134 LFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSV 193

Query: 219 YSKH--------DCVVEARKLFGEMPEVDGVSYNVMITCY-------------------- 250
           Y K           +V ARKLF EMP+ D +++  MIT Y                    
Sbjct: 194 YVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENL 253

Query: 251 --AWNEQ---------YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             AWN           ++E+L L R+++F         ++T++S  AN    Q+G+Q+H 
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHA 313

Query: 300 QTIVTTAISE-----VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
             I+   ++      + V+N+L+ +Y K  + +EA++IF  +   + + W A++S YV  
Sbjct: 314 Y-ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372

Query: 355 GNLEEALNLFIEMCRANIS--------------ADQA-----------------TFASIL 383
           G +EEA + F EM   N+                D+                   FA  L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A + L +L  G+QLH+ ++  G+ S++  G+A++ MYAK G ++ A   F  MP  ++V
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SWN++I+A  Q+G     ++ F+ M++ G  PD ++ L+VL+ACSH GL+E+G  YFNSM
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            + Y + P ++HYA MVD+ CR+G F  A  ++  MP +P   +W +++  CRIH N++ 
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
             +AA+QLFK+    D   YV +SNIYA  G+W  V++V+K MR++ VRK  A SW+E++
Sbjct: 613 GIEAAEQLFKLMPQNDGT-YVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVE 671

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
           +KVHVF  +D++HP+   + R +E L  EMKK GY PDT   LHD + E K  +L  HSE
Sbjct: 672 NKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSE 731

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+ F ++  P  + + V KN+R C DCH A K +SK+  REI VRD  RFHHFK+G C
Sbjct: 732 KLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDC 791

Query: 744 SCRDFW 749
           SCRD+W
Sbjct: 792 SCRDYW 797



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 260/561 (46%), Gaps = 81/561 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFK 58
           +PN + ++   LI+ Y   GNL   RE+FN   +  R +V +  +I GY+       A +
Sbjct: 74  IPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALE 133

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSI-LIICNSLVD 116
           LF  MR D    PD  TF ++LS          +  Q+H  ++K G   +   + N+L+ 
Sbjct: 134 LFRAMRRD-DFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLS 192

Query: 117 SYCK------IRCLDL--ARRVFKEMPQKDSVS--------------------------- 141
            Y K      I C  +  AR++F EMP++D ++                           
Sbjct: 193 VYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVEN 252

Query: 142 ----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
               +NA+I+G+   G  +EA+ L  +M+ LG +  D T+   +SA   +    +G+Q+H
Sbjct: 253 LGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMH 312

Query: 198 AFVVKTNFVEN----VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------- 244
           A+++K     N    + V+NAL+ LY K++ V EARK+F  MP  + +++N         
Sbjct: 313 AYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNA 372

Query: 245 ----------------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
                                 VMI+  A N    E LKLF++++   F+   F F+  L
Sbjct: 373 GRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGAL 432

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +  +    L+ GRQ+H Q +     S + V N+++ MYAKCG  E A+ +F  +  +  V
Sbjct: 433 TACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLV 492

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W +MI+A  Q G+  +A+ LF +M +  +  D+ TF ++L A +    +  G+   + +
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552

Query: 403 IRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQA 460
           + S G        + ++D++ ++G    A      MP +     W AL++ C  +G+   
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612

Query: 461 TLKSFEDMVQSGYQPDSVSLL 481
            +++ E + +   Q D   +L
Sbjct: 613 GIEAAEQLFKLMPQNDGTYVL 633


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/786 (34%), Positives = 430/786 (54%), Gaps = 53/786 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +++GY  S  +  AR LF  M +R  VSWT++I GY +     +A+ +F
Sbjct: 153 MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G   PD   FA+ LS        + L  +    +K G+   ++I  ++++ Y +
Sbjct: 213 CKMHREG-LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 121 -IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               LD A + F+ M +++  +++ +I   +  G  + AI ++         P   + A 
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER------DPVK-SIAC 324

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMPEV 238
             +   GLA    GR   A ++     E + V+ NAL+  Y ++  V EA++LF +MP  
Sbjct: 325 RTALITGLAQC--GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + +S+  MI  YA N + +E+L L +EL  +    S    +++    +N + L+ G Q+H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  +           N+L+ MY KC   E A+++F+ +     V W + ++A VQ   L+
Sbjct: 443 SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLD 502

Query: 359 EALNLFIEMCRANISADQATFASILRASAE------------------------------ 388
           EA N F  M    +S D  ++ +I+ A A                               
Sbjct: 503 EARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILL 558

Query: 389 -----LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                L +  +G+Q+H+  I+ G  S +   +AL+ MY K G   D+ + F  M ER+I 
Sbjct: 559 GVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIF 617

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +WN +I+  AQ+G  +  +K ++ M  +G  P+ V+ + +L+ACSH GL++EG ++F SM
Sbjct: 618 TWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSM 677

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           +Q Y L P  EHYA MVD+L R+G    AE+ +  MP EPD ++WS+++ +C+IHKN E 
Sbjct: 678 SQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEI 737

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            K+AA++LF++E   +A  YV +SNIY+  G W  V++V+K M+++GV K    SW ++K
Sbjct: 738 GKRAAEKLFRIEP-SNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIK 796

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
            K+H F   D+ H Q  EI   +E L   +K  GY PDT   LHD DEE K  SL YHSE
Sbjct: 797 DKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSE 856

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+A+ L+ TP+G PI ++KNLR C DCH  IK +S +T R+I +RD +RFHHF++G C
Sbjct: 857 KLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSC 916

Query: 744 SCRDFW 749
           SC DFW
Sbjct: 917 SCEDFW 922



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 255/513 (49%), Gaps = 28/513 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++ N +IS Y  +G    AR+L++++      +  IL+ GY +  +  EA ++F
Sbjct: 60  MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                DG  + + V +  ++S C      N  I +   +     +  +   NS++  YC 
Sbjct: 120 -----DGMLERNTVAWNAMIS-CY---VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR +F++MP+++ VS+  +I+G+ +   + +A  +F +M   G  P    FA+A
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVD 239
           LSA  GL ++ +   +    +KT F  +V +  A+L++YS+   V++ A K F  M E +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL-QIGRQIH 298
             +++ MI   +   +   ++ ++           + P  ++    A    L Q GR I 
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYE----------RDPVKSIACRTALITGLAQCGR-ID 339

Query: 299 TQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
              I+   I E  V   N+L+  Y + G   EAKE+F  +   +T+ W  MI+ Y Q G 
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEAL L  E+ R+ +    ++  SI  A + + +L  G Q+HS  ++ G   N F+ +A
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY K  +++ A Q F  M  ++IVSWN+ ++A  QN        +F++M+      D
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----D 515

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
            VS  +++SA +H     E +  F +M  +++L
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL 548



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/516 (22%), Positives = 231/516 (44%), Gaps = 56/516 (10%)

Query: 117 SYCKIRCLDL--------ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           S C  R  DL        AR VF  MP++D +++N++I+ +   G+ + A  L+  +   
Sbjct: 35  SGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI--- 91

Query: 169 GFKPSDFTFAAALSAGVG-LADIALGRQVHAFVVKTN----------FVEN--VFVANAL 215
                +    A L +G G L  +   R+V   +++ N          +V+N  + +A  L
Sbjct: 92  --SGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149

Query: 216 LDLYSKHDC---------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
            D     D                +V+AR LF +MPE + VS+ VMI+ Y   E + ++ 
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
            +F ++        Q  F++ LS V    +L +   +    + T    +V +  +++++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269

Query: 321 AK-CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           ++     + A + F ++   +   W+ MI+A    G ++ A+ ++      +I+   A  
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
             + +      +  L +Q+   +        V S +AL+  Y ++G + +A + F +MP 
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPF 381

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           RN +SW  +I+  AQNG ++  L   +++ +SG  P   SL S+  ACS+   +E G Q 
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQ- 440

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            +S+  K   +       +++ +  +    + A ++ ++M    D + W+S + +   + 
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQND 499

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
            L+ A+   D +      RD   +  + + YA A Q
Sbjct: 500 LLDEARNTFDNMLS----RDDVSWTTIISAYAHAEQ 531



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 115/291 (39%), Gaps = 61/291 (20%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV   ++ +    + GR  EA+E+F  +     + W +MISAY   G  + A +L+    
Sbjct: 33  EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY---- 88

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                                 ++S G              N+ +G+ LL  Y + G + 
Sbjct: 89  ---------------------DAISGG--------------NMRTGAILLSGYGRLGRVL 113

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A + F  M ERN V+WNA+IS   QNGD     + F+ M       D  S  S+L+   
Sbjct: 114 EARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGYC 169

Query: 489 HCGLIEEGLQYFNSMTQKYKLR--------PKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           H   + +    F  M ++  +          + E++    DI C+          M +  
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK----------MHREG 219

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
             PD+  ++S +++ +   NL+  +       K    RD     A+ N+Y+
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 11/155 (7%)

Query: 401 FVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           F +R        SG SA +    + G + +A + F  MP R+I++WN++ISA   NG   
Sbjct: 23  FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
           A  +   D +  G       L   LS     G + E  + F+ M ++  +      + +M
Sbjct: 83  AA-RDLYDAISGGNMRTGAIL---LSGYGRLGRVLEARRVFDGMLERNTVA-----WNAM 133

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +    ++G    A +L   MP   D   W+S++  
Sbjct: 134 ISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTG 167


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/759 (34%), Positives = 437/759 (57%), Gaps = 26/759 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + V  N L++ Y K   +A AR +F+ M    R  VSWT +    S+     EA +LF +
Sbjct: 83  DAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGE 142

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHAD-----IIKFGY--NSILIICNSLV 115
              +G   P+  T       C     A+EL  +        + K G+    + + C +L+
Sbjct: 143 TLEEG-LLPNAFTLCAATQAC----FASELFHLAGGAVLGLVFKLGFWGTDVSVGC-ALI 196

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
           D + K   L   RRVF  + ++  V +  LIT +A+ G ++EA++LF++M   GF+P  +
Sbjct: 197 DMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQY 256

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HD--CVVEARKLF 232
           T ++ LSA   L    LG+Q+H+  ++     +  V+  L+D+Y+K H+   +  AR++F
Sbjct: 257 TLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316

Query: 233 GEMPEVDGVSYNVMITCYAW-NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
             MP+ + +++  +++ Y     Q  + + LF ++       +   +S++L   AN  D 
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQ 376

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             GRQIHT  + +       V N+LV MYA+ G  EEA+  F  L   + V ++  +   
Sbjct: 377 DSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGD 436

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            +    ++      ++ R  +     TF S++ A+A +  L+ G++LH+  +++GF S+ 
Sbjct: 437 GRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDR 491

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             G++L+ MY++ G L DA Q F EM + N++SW ++IS  A++G A   L+ F DM+ +
Sbjct: 492 AIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAA 551

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +P+ V+ ++VLSACSH GL++EG ++F  M + + L P+ EHYA MVD+L RSG  ++
Sbjct: 552 GVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVED 611

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +MP + D ++W +++ +C+ H N++  + AA+ + ++E  +D APYV +SN+YA
Sbjct: 612 ALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEP-QDPAPYVLLSNLYA 670

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG W+ V++++  MR++ + K    SW+ + + +H F A D  HPQ  EI  K+E L++
Sbjct: 671 EAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIR 730

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN-TPEGSPILVMKNLRACT 710
           E+K  GY PDTS  LHD  +E+K   L  HSE++A+AF LI+ T    PI + KNLR C 
Sbjct: 731 EIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCV 790

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH+A+K +SK TGREI +RDS+RFH  KDG CSC ++W
Sbjct: 791 DCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 25/281 (8%)

Query: 290 DLQIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWT 345
           D+ +GR +    + T ++ E    VANSL+ +Y+KC     A+ +F  +       V WT
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANI--------SADQATFASILRASAELASLSLGKQ 397
           AM S   + G   EAL LF E     +        +A QA FAS      EL  L+ G  
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFAS------ELFHLAGGAV 175

Query: 398 LHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           L   V + GF  ++V  G AL+DM+AK+G L    + F  + ER +V W  LI+  AQ+G
Sbjct: 176 L-GLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSG 234

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            +   ++ F DM+++G+QPD  +L S+LSAC+  G    G Q  +S+  +  L       
Sbjct: 235 YSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLG-QQLHSLALRLGLESDSCVS 293

Query: 517 ASMVDILCRSG---CFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +VD+  +S        A ++  +MP + + + W+++++ 
Sbjct: 294 CGLVDMYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSG 333


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/683 (37%), Positives = 393/683 (57%), Gaps = 9/683 (1%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S PD      LL+  ++  +     Q+H+ ++    ++ L   N+L+  Y K   +    
Sbjct: 96  SVPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTL 152

Query: 129 RVFKEMPQKDS--VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            +F   P   +  V++  LI   ++     +A+  F  M+  G  P+ FTF+A L A   
Sbjct: 153 LLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAH 212

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            A ++ G+Q+HA + K  F+ + FVA ALLD+Y+K   ++ A  +F EMP  + VS+N M
Sbjct: 213 AALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSM 272

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +  N+ Y  ++ +FRE+        Q   S++LS  A  ++L  G+Q+H   +    
Sbjct: 273 IVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGL 330

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +  V V NSLVDMY KCG FE+A ++F        V W  MI    +  N E+A   F  
Sbjct: 331 VGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQA 390

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  +  D+A+++S+  ASA +A+L+ G  +HS V+++G + N    S+L+ MY K GS
Sbjct: 391 MIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGS 450

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + DA Q F+E  E N+V W A+I+   Q+G A   +K FE+M+  G  P+ ++ +SVLSA
Sbjct: 451 MLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSA 510

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH G I++G +YFNSM   + ++P  EHYA MVD+L R G  +EA + +  MPFEPD +
Sbjct: 511 CSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSL 570

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +C  H N+E  ++ A++LFK+E   +   Y+ +SNIY   G  E   +V++ M
Sbjct: 571 VWGALLGACGKHANVEMGREVAERLFKLEP-DNPGNYMLLSNIYIRHGMLEEADEVRRLM 629

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
              GVRK +  SW+++K++  VF AND  H +T EI   ++ L + +K+ GY  +T  A 
Sbjct: 630 GINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFAT 689

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            +  E  + +SL  HSE+LA+AF L+  P GSP+ + KNLR C DCH  +K  S+I  RE
Sbjct: 690 -NSVEGSEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQRE 748

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD +RFH F +G CSC D+W
Sbjct: 749 IIVRDINRFHRFTNGSCSCMDYW 771



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 263/530 (49%), Gaps = 13/530 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L+  Y K G++     LFN+    +   V+WT LI   S+ N+  +A   F  MRT G
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG 195

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P++ TF+ +L  C+     +E  Q+HA I K  + +   +  +L+D Y K   + LA
Sbjct: 196 -IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLA 254

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             VF EMP ++ VS+N++I GF K  L   AI +F E+  LG  P   + ++ LSA  GL
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGL 312

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++  G+QVH  +VK   V  V+V N+L+D+Y K     +A KLF    + D V++NVMI
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI 372

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
                   ++++   F+ +     +  +  +S+L    A+   L  G  IH+  + T  +
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
              ++++SLV MY KCG   +A ++F      + V WTAMI+ + Q G   EA+ LF EM
Sbjct: 433 KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM 492

Query: 368 CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
               +  +  TF S+L A +    +  G K  +S          +   + ++D+  + G 
Sbjct: 493 LNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGR 552

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           L++A +  + MP E + + W AL+ AC ++ + +   +  E + +   +PD+     +LS
Sbjct: 553 LEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK--LEPDNPGNYMLLS 610

Query: 486 ACS-HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
                 G++EE  +    M        +KE   S +D+  R+  F+  ++
Sbjct: 611 NIYIRHGMLEEADEVRRLMGIN---GVRKESGCSWIDVKNRTFVFNANDR 657



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 168/360 (46%), Gaps = 36/360 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N VS N +I G+VK           N +  R        IG       FRE   L 
Sbjct: 261 MPHRNLVSWNSMIVGFVK-----------NKLYGRA-------IG------VFREVLSL- 295

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     PD V+ +++LS C+     +   QVH  I+K G   ++ + NSLVD YCK
Sbjct: 296 ---------GPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCK 346

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               + A ++F     +D V++N +I G  +    E+A   F  M   G +P + ++++ 
Sbjct: 347 CGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSL 406

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             A   +A +  G  +H+ V+KT  V+N  ++++L+ +Y K   +++A ++F E  E + 
Sbjct: 407 FHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNV 466

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHT 299
           V +  MIT +  +    E++KLF E+           F ++LS  ++   +  G +  ++
Sbjct: 467 VCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNS 526

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
              V      ++    +VD+  + GR EEA     ++     ++ W A++ A  +  N+E
Sbjct: 527 MANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVE 586


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 422/741 (56%), Gaps = 23/741 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ Y K G LA+AR LF+ M +R  VS+  L+  ++Q+  F  A  LF  +R +G  
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +V   T+L      D A     VH+   K G++    + + L+D+Y     +  A  
Sbjct: 160 VNQFV-LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  + +KD+V + A+++ +++    E A                F  A + S    L  
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENA----------------FRCAQSCS----LLA 258

Query: 190 IALGRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           I+  RQ +H   +KT       V  ALLD+Y+K   + +AR  F  +P  D +  + MI+
Sbjct: 259 ISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 318

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA + Q +++ +LF  L  +    +++  S++L    N + L  G+QIH   I     S
Sbjct: 319 RYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHES 378

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ V N+L+D YAKC   + + +IF++L   + V W  ++  + Q G  EEAL++F EM 
Sbjct: 379 DLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQ 438

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            A +   Q T++S+LRA A  AS+    Q+H  + +S F ++   G++L+D YAK G ++
Sbjct: 439 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIR 498

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA++ F+ + ER+I+SWNA+IS  A +G A   L+ F+ M +S  + + ++ +++LS C 
Sbjct: 499 DALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCC 558

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
             GL+  GL  F+SM   + ++P  EHY  +V +L R+G  ++A + +  +P  P  ++W
Sbjct: 559 STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVW 618

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            ++++SC IHKN+   + +A+++ ++E  +D   YV +SN+YA AG  + V+ ++K+MR 
Sbjct: 619 RALLSSCIIHKNVALGRFSAEKILEIEP-QDETTYVLLSNMYAAAGSLDQVALLRKSMRN 677

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            GVRKV   SWVE+K ++H F+     HP    I   +E L  +  +EGY PD +  LHD
Sbjct: 678 IGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHD 737

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            D+E K   L  HSERLA+A+ L+ TP G PI ++KNLR+C DCH A  +ISKI  REI 
Sbjct: 738 VDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREII 797

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD +RFHHF+DG CSC D+W
Sbjct: 798 VRDINRFHHFEDGKCSCGDYW 818



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 242/526 (46%), Gaps = 25/526 (4%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIIC-NSLVDSYCKIRCLDLARR 129
           D    A  L GC     A     VH  +++  G   + + C N L++ Y K+  L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP+++ VSF  L+   A+ G  E A  LF  ++  G + + F     L   + +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   VH+   K     N FV + L+D YS    V +A  +F  +   D V +  M++C
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
           Y+ N+  + + +  +                        L +   RQ IH   I T   +
Sbjct: 238 YSENDCPENAFRCAQSCSL--------------------LAISCARQGIHGCAIKTLNDT 277

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           E  V  +L+DMYAKCG  ++A+  F  + +   +  + MIS Y Q    E+A  LF+ + 
Sbjct: 278 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 337

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R+++  ++ + +S+L+A   +  L  GKQ+H+  I+ G  S++F G+AL+D YAK   + 
Sbjct: 338 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 397

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            +++ F  + + N VSWN ++   +Q+G  +  L  F +M  +      V+  SVL AC+
Sbjct: 398 SSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 457

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
               I    Q   S+ +K           S++D   + G   +A K+   +  E D I W
Sbjct: 458 STASIRHAGQIHCSI-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISW 515

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           +++I+   +H     A +  D++ K     +   +VA+ ++    G
Sbjct: 516 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTG 561



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +TV  N LI  Y K G +  A ++F  +++R  +SW  +I GY+   Q  +A +LF D
Sbjct: 478 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF-D 536

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
                  + + +TF  LLS C      N 
Sbjct: 537 RMNKSNVESNDITFVALLSVCCSTGLVNH 565


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/683 (36%), Positives = 392/683 (57%), Gaps = 9/683 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARRV 130
           D  TF  LL     P TA    Q+HA  ++ G          +LV +Y +   +  A R 
Sbjct: 70  DAFTFPPLLRAAQGPGTA---AQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F EM  +D  ++NA+++G  +     EA+ LF  M   G      T ++ L   V L D 
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           AL   +H + VK    + +FV NA++D+Y K   + E RK+F  M   D V++N +I+ +
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT-AISE 309
               Q   ++++F  ++ +          +L S +A   D+  GR +H   +     + +
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +   N++VDMYAK  + E A+ +F ++     V W  +I+ Y+Q G   EA++++  M +
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 370 -ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +   Q TF S+L A + L +L  G ++H+  I++G   +V+ G+ ++D+YAK G L 
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A+  F++ P R+   WNA+IS    +G     L  F  M Q G  PD V+ +S+L+ACS
Sbjct: 427 EAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS 486

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+++G  +FN M   Y ++P  +HYA MVD+  R+G  D+A   +  MP +PD  +W
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CRIH N+E  K A+  LF+++  ++   YV MSN+YA  G+W+ V +V+  +R 
Sbjct: 547 GALLGACRIHGNVEMGKVASQNLFELDP-KNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDEL--HPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           + ++K   +S +E+K  V+VF + +++  HPQ  EI+R++ +L+ +++  GY PD S  L
Sbjct: 606 QNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVL 665

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D +E+ K + L  HSERLAIAF +INTP  +P+ + KNLR C DCH A K ISKIT RE
Sbjct: 666 QDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITERE 725

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRDS+RFHHFKDG+CSC DFW
Sbjct: 726 IIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 12/235 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + ++ N ++  Y K   +  A+ +F+SM  R AVSW  LI GY Q     EA  ++  M+
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P   TF ++L   S      +  ++HA  IK G N  + +   ++D Y K   L
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A  +F++ P++ +  +NA+I+G    G   +A+ LF +MQ  G  P   TF + L+A 
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
                +  GR         NF   +  A  +  +   + C+V+   +FG   ++D
Sbjct: 486 SHAGLVDQGR---------NFFNMMQTAYGIKPIAKHYACMVD---MFGRAGQLD 528


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/671 (36%), Positives = 405/671 (60%), Gaps = 5/671 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y  +G L  AR+ F+ + +R  V W +++ G  +      A +LF +MR  G  +P
Sbjct: 182 LVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASG-CEP 240

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T A  LS C+         Q+H+  +K G    + + N+L+  Y K +CLD A R+F
Sbjct: 241 NFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLF 300

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + MPQ D V++N +I+G  + GL  EA  LF +MQ  G +P   T  + L A   L  + 
Sbjct: 301 ELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLK 360

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G++VH ++V+     +VF+ +AL+D+Y K   V  A+ L+     +D V  + MI+ Y 
Sbjct: 361 QGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYV 420

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   +E+L++FR L       +    +++L   A+   L +G+QIH   +      +  
Sbjct: 421 LNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCY 480

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++L+DMYAKCGR + +  IF  +S    V W +MIS++ Q G  +EAL+LF +MC   
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEG 540

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  +  T ++ L A A L ++  GK++H   I+    +++F+ SAL+DMYAK G+L+ A+
Sbjct: 541 IKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELAL 600

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ MP++N VSWN++ISA   +G  + ++     M + GY+PD V+ L+++SAC+H G
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAG 660

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG+Q F  MT+KY + P+ EH+A MVD+  RSG  D+A + +A MPF+PD  +W ++
Sbjct: 661 LVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGAL 720

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H+N+E A  A+ +LFK++   ++  YV MSNI AVAG+W+ VS+V++ M++  +
Sbjct: 721 LHACRVHRNVELADIASQELFKLDP-ANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKI 779

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY--KPDTSCALHDE 669
            K+  YSWV++ +  H+F A+D+ HP++ +I   ++ L+QE+++EGY  +PD    +H  
Sbjct: 780 LKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDLCHPMH-P 838

Query: 670 DEEIKVESLKY 680
           D   +VE  KY
Sbjct: 839 DNNTQVEFKKY 849



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 178/659 (27%), Positives = 321/659 (48%), Gaps = 26/659 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVS---WTILIGGYSQKNQFREAFKLFVDMRT-DG 67
           L+  YV +     A  +F+++    A S   W  LI G++   Q   A   +V M +   
Sbjct: 76  LLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPA 135

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              PD  T   ++  C+     +    VH      G  + + + ++LV  Y     L  A
Sbjct: 136 APSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNA 195

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R  F  +P++D V +N ++ G  K G  + A++LF  M+  G +P+  T A  LS     
Sbjct: 196 RDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATD 255

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           AD+  G Q+H+  VK      V VAN LL +Y+K  C+ +A +LF  MP+ D V++N MI
Sbjct: 256 ADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMI 315

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +    N  + E+  LF ++Q +          +LL  + +   L+ G+++H   +     
Sbjct: 316 SGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN 375

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +V + ++LVD+Y KC     A+ ++     I  V  + MIS YV  G  EEAL +F  +
Sbjct: 376 MDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYL 435

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  +  T AS+L   A +A+L LG+Q+H +V+R+ +    +  SAL+DMYAK G L
Sbjct: 436 LEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRL 495

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             +   F +M +++ V+WN++IS+ +QNG  Q  L  F  M   G + +++++ + LSAC
Sbjct: 496 DLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSAC 555

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    I  G +  + +T K  ++      ++++D+  + G  + A ++   MP + +E+ 
Sbjct: 556 ASLPAIYYG-KEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMP-DKNEVS 613

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEK---LRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           W+S+I++   H      K++   L  M++     D   ++A+ +  A AG  E   Q+ +
Sbjct: 614 WNSIISAYGAHG---LVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQ 670

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            M ++ +          +  ++  F    +L+ ++     K++  +Q +    +KPD  
Sbjct: 671 CMTKKYL----------IAPRMEHFACMVDLYSRSG----KLDKAIQFIADMPFKPDAG 715



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 245/472 (51%), Gaps = 8/472 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L++ Y K   L  A  LF  M     V+W  +I G  Q   F EAF LF DM+   G
Sbjct: 280 ANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS-G 338

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           + PD +T  +LL   ++ +   +  +VH  I++   N  + + ++LVD Y K R + +A+
Sbjct: 339 ARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQ 398

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            ++      D V  + +I+G+   G++EEA+++F  +     KP+  T A+ L     +A
Sbjct: 399 NLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMA 458

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LG+Q+H +V++  +    +V +AL+D+Y+K   +  +  +F +M + D V++N MI+
Sbjct: 459 ALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMIS 518

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            ++ N + +E+L LFR++       +    S  LS  A+   +  G++IH  TI     +
Sbjct: 519 SFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKA 578

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++   ++L+DMYAKCG  E A  +F  +   + V W ++ISAY   G ++E+++L   M 
Sbjct: 579 DIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQ 638

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSL 427
                 D  TF +++ A A    +  G QL   + +   ++      A ++D+Y++SG L
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKL 698

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ-ATLKSFE----DMVQSGY 473
             AIQ   +MP + +   W AL+ AC  + + + A + S E    D   SGY
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGY 750



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 185/361 (51%), Gaps = 5/361 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +    + L+  Y K  ++  A+ L+++      V  + +I GY       EA ++F  
Sbjct: 375 NMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRY 434

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +    P+ VT A++L GC+         Q+H  +++  Y     + ++L+D Y K  
Sbjct: 435 L-LEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCG 493

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            LDL+  +F +M QKD V++N++I+ F++ G  +EA+ LF +M   G K ++ T +AALS
Sbjct: 494 RLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALS 553

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  I  G+++H   +K     ++F  +AL+D+Y+K   +  A ++F  MP+ + VS
Sbjct: 554 ACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS 613

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I+ Y  +   KES+ L   +Q   +      F  L+S  A+   ++ G Q+  Q +
Sbjct: 614 WNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLF-QCM 672

Query: 303 VTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEE 359
               +   ++ +   +VD+Y++ G+ ++A +  A++        W A++ A     N+E 
Sbjct: 673 TKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732

Query: 360 A 360
           A
Sbjct: 733 A 733



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 12/191 (6%)

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN---VFSGSALLDMYAKSGSLKD 429
           SAD+    ++LR       L LG Q+H+  + SG +S+   +   + LL MY  +   +D
Sbjct: 31  SADR--LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRD 88

Query: 430 AIQTFKEMPERNIVS---WNALISACAQNGDAQATLKSFEDMVQ--SGYQPDSVSLLSVL 484
           A+  F  +P     S   WN LI      G     +  +  M    +   PD+ +L  V+
Sbjct: 89  AVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVV 148

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            +C+  G +  G +  +   +   L       +++V +   +G    A      +P E D
Sbjct: 149 KSCAALGAMSLG-RLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIP-ERD 206

Query: 545 EIMWSSVINSC 555
            ++W+ +++ C
Sbjct: 207 CVLWNVMMDGC 217


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 370/625 (59%), Gaps = 1/625 (0%)

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           +  R +F ++ Q +   +N +I G       ++AI+ +  M+  GF P++FTF   L A 
Sbjct: 63  NYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKAC 122

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L D+ LG ++H  VVK  F  +VFV  +L+ LY+K   + +A K+F ++P+ + VS+ 
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWT 182

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ Y    +++E++ +FR L         F    +LS      DL  G  IH   +  
Sbjct: 183 AIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEM 242

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             +  V V  SLVDMYAKCG  E+A+ +F  +     V W AMI  Y   G  +EA++LF
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 302

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           ++M R N+  D  T   +L A A L +L LG+ +   V R+ F+ N   G+AL+D+YAK 
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS+  A + FK M E++ V WNA+IS  A NG  + +   F  + + G +PD  + + +L
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
             C+H GL++EG +YFNSM + + L P  EHY  MVD+L R+G  DEA +L+  MP E +
Sbjct: 423 CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEAN 482

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            I+W +++ +CRIH++ + A+ A  QL ++E   ++  YV +SNIY+   +W+  ++V+ 
Sbjct: 483 AIVWGALLGACRIHRDTQLAELALKQLIELEPW-NSGNYVLLSNIYSANLKWDEAAKVRL 541

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
           +M E+ ++K    SW+E+   VH F   D+ HP + +I  K++ L ++MK  GY P T  
Sbjct: 542 SMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDF 601

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            L D +EE K   L  HSE+LAIAF LI+    + I V+KNLR C DCH AIKLIS ITG
Sbjct: 602 VLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITG 661

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REITVRD++RFH F++G CSC D+W
Sbjct: 662 REITVRDNNRFHCFREGSCSCNDYW 686



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 221/463 (47%), Gaps = 3/463 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           NM++       +    R LF+ +       W  +I G    + F +A + +  MR++G  
Sbjct: 50  NMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFL 109

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF  +L  C+        +++H  ++K G++  + +  SLV  Y K   L+ A +
Sbjct: 110 -PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHK 168

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++P K+ VS+ A+I+G+   G   EAI +F  +  +   P  FT    LSA   L D
Sbjct: 169 VFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGD 228

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G  +H  +++   V NVFV  +L+D+Y+K   + +AR +F  MPE D VS+  MI  
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQG 288

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA N   KE++ LF ++Q        +    +LS  A    L++G  +         +  
Sbjct: 289 YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN 348

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             +  +L+D+YAKCG    A E+F  +     V W A+IS     G ++ +  LF ++ +
Sbjct: 349 PVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEK 408

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGSLK 428
             I  D  TF  +L        +  G++  + + R      ++     ++D+  ++G L 
Sbjct: 409 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 468

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +A Q  + MP E N + W AL+ AC  + D Q    + + +++
Sbjct: 469 EAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 13/251 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      L+  Y K GN+  AR +F+ M ++  VSW  +I GY+     +EA  LF+ M
Sbjct: 246 RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQM 305

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           + +    PD  T   +LS C+        E +    D  +F YN +L    +L+D Y K 
Sbjct: 306 QRE-NVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVL--GTALIDLYAKC 362

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  A  VFK M +KD V +NA+I+G A  G  + +  LF +++ LG KP   TF   L
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422

Query: 182 SAGVGLADIALGRQ----VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP- 236
                   +  GR+    ++ F   T  +E+      ++DL  +   + EA +L   MP 
Sbjct: 423 CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY---GCMVDLLGRAGLLDEAHQLIRNMPM 479

Query: 237 EVDGVSYNVMI 247
           E + + +  ++
Sbjct: 480 EANAIVWGALL 490


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/716 (34%), Positives = 409/716 (57%), Gaps = 14/716 (1%)

Query: 41  TILIGGYSQKNQFREAFKLFVDMR-TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           + LI  Y + N   +A K++  MR TD  ++ D     ++L  C    +     +VH  +
Sbjct: 93  SFLITSYIKNNCPADAAKIYAYMRGTD--TEVDNFVIPSVLKACCLIPSFLLGQEVHGFV 150

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           +K G++  + +CN+L+  Y ++  L LAR +F ++  KD VS++ +I  + + GL +EA+
Sbjct: 151 VKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEAL 210

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV--ENVFVANALLD 217
            L  +M  +  KPS+    +       LAD+ LG+ +HA+V++        V +  AL+D
Sbjct: 211 DLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALID 270

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K + +  AR++F  + +   +S+  MI  Y       E ++LF ++         FP
Sbjct: 271 MYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKM----LGEGMFP 326

Query: 278 FS-TLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
              T+LS+V        L++G+ +H  T+       + +A + +DMY KCG    A+ +F
Sbjct: 327 NEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF 386

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
            +      + W+AMIS+Y Q   ++EA ++F+ M    I  ++ T  S+L   A+  SL 
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           +GK +HS++ + G   ++   ++ +DMYA  G +  A + F E  +R+I  WNA+IS  A
Sbjct: 447 MGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFA 506

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
            +G  +A L+ FE+M   G  P+ ++ +  L ACSH GL++EG + F+ M  ++   PK 
Sbjct: 507 MHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKV 566

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           EHY  MVD+L R+G  DEA +L+  MP  P+  ++ S + +C++HKN++  + AA Q   
Sbjct: 567 EHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLS 626

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
           +E  + +   V MSNIYA A +W  V+ +++AM++ G+ K    S +E+   +H F   D
Sbjct: 627 LEPHK-SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGD 685

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
             HP   ++   I+ + ++++  GY PD SC LH+ D+E KV +L YHSE+LA+A+ LI+
Sbjct: 686 REHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLIS 745

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           T  G PI ++KNLR C DCH A KL+SKI GREI VRD +RFHHFK+G CSC D+W
Sbjct: 746 TAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/640 (37%), Positives = 386/640 (60%), Gaps = 4/640 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-F 170
           NSL++ Y K R    AR++F  MP+++ VS+ A++ G+   G + E +KLF  M   G  
Sbjct: 73  NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P++F       +      I  G+Q H   +K   + + FV N L+ +YS      EA +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +  ++P  D   ++  ++ Y     +KE L + R+     F  +   + + L + +N  D
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L +  Q+H++ +     +EV+   +L++MY KCG+   A+ +F +    +    T ++ A
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y Q  + EEALNLF +M    +  ++ TFA +L + AEL+ L  G  LH  V++SG+ ++
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  G+AL++MYAKSGS++DA + F  M  R+IV+WN +IS C+ +G  +  L++F+ M+ 
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           +G  P+ ++ + VL ACSH G +E+GL YFN + +K+ ++P  +HY  +V +L ++G F 
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFK 492

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL-RDAAPYVAMSNI 589
           +AE  M   P E D + W +++N+C + +N    KK A+  + +EK   D+  YV +SNI
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--YAIEKYPNDSGVYVLLSNI 550

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           +A + +WE V++V+  M  RGV+K    SW+ ++++ HVF A D  HP+   I  K++ +
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
           M ++K  GY PD + A HD DEE + ++L YHSE+LA+A+ LI TPE SP+ V KN+R C
Sbjct: 611 MSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRIC 670

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH+AIKLISKI+ R I +RDS+RFHHF DG CSC D+W
Sbjct: 671 DDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 217/453 (47%), Gaps = 6/453 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++    N LI+ YVK      AR+LF+ M +R  VSW  ++ GY       E  KLF  M
Sbjct: 67  EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G S P+      +   CS      E  Q H   +K+G  S   + N+LV  Y     
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              A RV  ++P  D   F++ ++G+ + G  +E + +  +  +  F  ++ T+ ++L  
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D+ L  QVH+ +V+  F   V    AL+++Y K   V+ A+++F +    +    
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             ++  Y  ++ ++E+L LF ++       +++ F+ LL+ +A    L+ G  +H   + 
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +   + V V N+LV+MYAK G  E+A++ F+ ++    V W  MIS     G   EAL  
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEA 426

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSF---VIRSGFMSNVFSGSALLDM 420
           F  M       ++ TF  +L+A + +  +  G  LH F   + +     ++   + ++ +
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQG--LHYFNQLMKKFDVQPDIQHYTCIVGL 484

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            +K+G  KDA    +  P E ++V+W  L++AC
Sbjct: 485 LSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 8/262 (3%)

Query: 273 RSQFP---FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA---NSLVDMYAKCGRF 326
           ++ FP    + LL V AN   L+IG  IH   IVT   S  + A   NSL+++Y KC   
Sbjct: 26  KTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRET 85

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL-RA 385
             A+++F  +   + V W AM+  Y   G   E L LF  M  +  S      A+++ ++
Sbjct: 86  VRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKS 145

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            +    +  GKQ H   ++ G +S+ F  + L+ MY+      +AI+   ++P  ++  +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           ++ +S   + G  +  L          +  ++++ LS L   S+   +   LQ  + M  
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV- 264

Query: 506 KYKLRPKKEHYASMVDILCRSG 527
           ++    + E   +++++  + G
Sbjct: 265 RFGFNAEVEACGALINMYGKCG 286



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 10/216 (4%)

Query: 382 ILRASAELASLSLGKQLHSFVI---RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           +L+  A  + L +G+ +H+ +I   +S    + +  ++L+++Y K      A + F  MP
Sbjct: 37  LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGL 497
           ERN+VSW A++     +G     LK F+ M  SG  +P+      V  +CS+ G IEEG 
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS--- 554
           Q F+    KY L   +    ++V +        EA +++  +P+  D  ++SS ++    
Sbjct: 157 Q-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY-CDLSVFSSALSGYLE 214

Query: 555 CRIHK-NLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           C   K  L+  +K A++ F    L   +     SN+
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/720 (35%), Positives = 417/720 (57%), Gaps = 2/720 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ Y K G LA+AR LF+ M +R  VS+  L+  ++Q+  F  A  LF  +R +G  
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +V   T+L      D A     VH+   K G++    + + L+D+Y     +  A  
Sbjct: 160 VNQFV-LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  + +KD+V + A+++ +++    E A ++F +M+  G KP+ F   + L A V L  
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+ +H   +KT       V  ALLD+Y+K   + +AR  F  +P  D +  + MI+ 
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISR 338

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA + Q +++ +LF  L  +    +++  S++L    N + L  G+QIH   I     S+
Sbjct: 339 YAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESD 398

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V N+L+D YAKC   + + +IF++L   + V W  ++  + Q G  EEAL++F EM  
Sbjct: 399 LFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQA 458

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +   Q T++S+LRA A  AS+    Q+H  + +S F ++   G++L+D YAK G ++D
Sbjct: 459 AQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRD 518

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A++ F+ + ER+I+SWNA+IS  A +G A   L+ F+ M +S  + + ++ +++LS CS 
Sbjct: 519 ALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSS 578

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+  GL  F+SM   + ++P  EHY  +V +L R+G  ++A + +  +P  P  ++W 
Sbjct: 579 TGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWR 638

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           ++++SC IHKN+   + +A+++ ++E  +D   YV +SN+YA AG  + V+ ++K+MR  
Sbjct: 639 ALLSSCIIHKNVALGRFSAEKILEIEP-QDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 697

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GVRKV   SWVE+K ++H F+     HP    I   +E L  +  +EGY PD +  LHD 
Sbjct: 698 GVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDV 757

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K   L  HSERLA+A+ L+ TP G PI ++KNLR+C DCH A  +ISKI  REI V
Sbjct: 758 DKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 254/525 (48%), Gaps = 4/525 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIIC-NSLVDSYCKIRCLDLARR 129
           D    A  L GC     A     VH  +++  G   + + C N L++ Y K+  L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP+++ VSF  L+   A+ G  E A  LF  ++  G + + F     L   + +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   VH+   K     N FV + L+D YS    V +A  +F  +   D V +  M++C
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y+ N+  + + ++F +++ +    + F  +++L        + +G+ IH   I T   +E
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V  +L+DMYAKCG  ++A+  F  + +   +  + MIS Y Q    E+A  LF+ + R
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +++  ++ + +S+L+A   +  L  GKQ+H+  I+ G  S++F G+AL+D YAK   +  
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           +++ F  + + N VSWN ++   +Q+G  +  L  F +M  +      V+  SVL AC+ 
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              I    Q   S+ +K           S++D   + G   +A K+   +  E D I W+
Sbjct: 478 TASIRHAGQIHCSI-EKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWN 535

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++I+   +H     A +  D++ K     +   +VA+ ++ +  G
Sbjct: 536 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTG 580



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +TV  N LI  Y K G +  A ++F  +++R  +SW  +I GY+   Q  +A +LF D
Sbjct: 497 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF-D 555

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
                  + + +TF  LLS CS     N 
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNH 584


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/749 (35%), Positives = 430/749 (57%), Gaps = 16/749 (2%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+S + + G L  A++++  + +R AV+   LI G  ++     A ++F+  R     + 
Sbjct: 319  LVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNV 378

Query: 72   DYVTFATLLSGCSEPDTANELI----QVHADIIKFG--YNSILIICNSLVDSYCKIRCLD 125
            D  T+  LLS  +E  TA + +    +VHA +++ G  Y  I  + N LV+ Y K   +D
Sbjct: 379  D--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKI-AVSNGLVNMYAKCGAID 435

Query: 126  LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
             A RVF+ M  +D +S+N +IT   + G  E A+  +  M+     PS+F   + LS+  
Sbjct: 436  KACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCA 495

Query: 186  GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            GL  +A G+Q+H   VK     +  V+NAL+ +Y +   + E  ++F  M   D VS+N 
Sbjct: 496  GLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS 555

Query: 246  MITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++   A ++    ES+++F  +  +    ++  F   L+ +     L++G+QIH+  +  
Sbjct: 556  IMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKH 615

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNL 363
                +  V N+L+  YAK G  +  + +F+ +S     + W +MIS Y+  G+L+EA++ 
Sbjct: 616  GVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDC 675

Query: 364  FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
               M  +    D  TF+ +L A A +A+L  G ++H+F +RS   S+V   SAL+DMY+K
Sbjct: 676  VCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSK 735

Query: 424  SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
             G +  A + F  M ++N  SWN++IS  A++G  +  L+ FE+M +SG  PD V+ +SV
Sbjct: 736  CGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSV 795

Query: 484  LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
            LSACSH GL+E GL YF  M + Y + P+ EHY+ ++D+L R+G  D+ ++ M +MP +P
Sbjct: 796  LSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKP 854

Query: 544  DEIMWSSVINSCRIHKN---LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            + ++W +V+ +C+  K+   ++   +A+  L ++E  ++   YV  S  +A  G+WE  +
Sbjct: 855  NTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEP-QNPVNYVLSSKFHAAIGRWEDTA 913

Query: 601  QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
            + + AM+   V+K    SWV L   VH F A D  HP T EI  K+  L+Q+++  GY P
Sbjct: 914  KARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVP 973

Query: 661  DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
             T   LHD +EE K E L+YHSE+LA+AF L  +  G PI +MKNLR C DCH A + IS
Sbjct: 974  LTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYIS 1033

Query: 721  KITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +I GR+I +RDS RFHHFKDG CSC D+W
Sbjct: 1034 QIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 183/693 (26%), Positives = 332/693 (47%), Gaps = 49/693 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-G 68
           N L++ Y K   L  AR +F+ M  R AVSWT LI G+       +AF LF  M  +G G
Sbjct: 104 NHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPG 163

Query: 69  SDPDYVTFATLLSGC--SEPDTANELIQVHADIIKFGYNSILIICNSLVDSY--CKIRCL 124
             P   TF ++L  C  S PD     +QVH  + K  + S   +CN+L+  Y  C +   
Sbjct: 164 CRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPP 223

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFTFAAA 180
            LA+RVF   P +D +++NAL++ +AK G       LF  MQ+    +  +P++ TF + 
Sbjct: 224 ILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSL 283

Query: 181 LSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           ++A   L+  +LG   Q+   V+K+    +++V +AL+  +++H  + EA+ ++  + E 
Sbjct: 284 ITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKER 342

Query: 239 DGVSYNVMITCYAWNEQYKESLKLF---RELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           + V+ N +I      +  + + ++F   R+      D      S +      +  L+ GR
Sbjct: 343 NAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGR 402

Query: 296 QIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           ++H   +    I  ++ V+N LV+MYAKCG  ++A  +F  +     + W  +I+A  Q 
Sbjct: 403 EVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQN 462

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  E A+  +  M + +I        S L + A L  L+ G+QLH   ++ G   +    
Sbjct: 463 GYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVS 522

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN-GDAQATLKSFEDMVQSGY 473
           +AL+ MY + G + +  + F  M   ++VSWN+++   A +      +++ F +M++SG 
Sbjct: 523 NALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGL 582

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ V+ ++ L+A +   ++E G Q  +S+  K+ +        +++    +SG  D  E
Sbjct: 583 VPNKVTFVNFLAALTPLSVLELGKQ-IHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCE 641

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
           +L ++M    D I W+S+I+    + +L+ A      +   E++ D   +  + N  A  
Sbjct: 642 RLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACA-- 699

Query: 594 GQWESVSQVKKAMRER--GVRK------VTAYSWVELKSKV-HVFTANDELH--PQTNE- 641
               SV+ +++ M     G+R       V   + V++ SK   +  A+   H   Q NE 
Sbjct: 700 ----SVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 642 -------------IRRKIENLMQEMKKEGYKPD 661
                        + RK   + +EM++ G  PD
Sbjct: 756 SWNSMISGYARHGLGRKALEIFEEMQESGESPD 788



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 244/477 (51%), Gaps = 23/477 (4%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +H +++K G    L + N LV+SY K   LD ARRVF  MP +++VS+  LI+G    GL
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 155 NEEAIKLFVEM--QHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVF 210
            E+A  LF  M  +  G +P+ FTF + L A    G   +    QVH  V KT F  N  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 211 VANALLDLYSKHDCVVE----ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           V NAL+ +Y    C V     A+++F   P  D +++N +++ YA       +  LFR +
Sbjct: 207 VCNALISMYGS--CSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 267 QF----TRFDRSQFPFSTLLSVV-ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           Q+         ++  F +L++    +   L +  Q+  + + +   S++ V ++LV  +A
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           + G  +EAK+I+  L   + V    +I+  V++ + E A  +F+   R + + +  T+  
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMG-ARDSAAVNVDTYVV 383

Query: 382 ILRASAELAS----LSLGKQLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +L A AE ++    L  G+++H+ V+R+G +   +   + L++MYAK G++  A + F+ 
Sbjct: 384 LLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQL 443

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M  R+ +SWN +I+A  QNG  +A + ++  M Q+   P + + +S LS+C+  GL+  G
Sbjct: 444 MEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAG 503

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
            Q  +    K+ L        ++V +    G   E  ++   M    D + W+S++ 
Sbjct: 504 -QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMG 558



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 181/368 (49%), Gaps = 5/368 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFVDM 63
           +T  +N L+  Y + G ++   E+FNSM     VSW  ++G   S +    E+ ++F +M
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNM 577

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  P+ VTF   L+  +         Q+H+ ++K G      + N+L+  Y K   
Sbjct: 578 -MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGD 636

Query: 124 LDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           +D   R+F  M  ++D++S+N++I+G+   G  +EA+     M H        TF+  L+
Sbjct: 637 VDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLN 696

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +A +  G ++HAF ++++   +V V +AL+D+YSK   +  A K+F  M + +  S
Sbjct: 697 ACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFS 756

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ YA +   +++L++F E+Q +        F ++LS  ++   ++ G        
Sbjct: 757 WNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME 816

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL 361
               +  ++  + ++D+  + G  ++ +E    +    +T+ W  ++ A  Q+      +
Sbjct: 817 DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVA-CQQSKHRAKI 875

Query: 362 NLFIEMCR 369
           +L  E  R
Sbjct: 876 DLGTEASR 883



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 10/189 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G +  A ++F+SM  +   SW  +I GY++    R+A ++F +M+
Sbjct: 722 DVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQ 781

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD+VTF ++LS CS        +     +  +G    +   + ++D   +   L
Sbjct: 782 -ESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGEL 840

Query: 125 DLARRVFKEMPQK-DSVSFNALITGF------AKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           D  +   K MP K +++ +  ++         AK  L  EA ++ +E++     P ++  
Sbjct: 841 DKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQ--NPVNYVL 898

Query: 178 AAALSAGVG 186
           ++   A +G
Sbjct: 899 SSKFHAAIG 907



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           + LH  V++ G   ++F  + L++ YAK   L  A + F  MP RN VSW  LIS    +
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 456 GDAQATLKSFEDMVQ--SGYQPDSVSLLSVLSACSHCG 491
           G  +     F  M++   G +P S +  SVL AC   G
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSG 182


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 282/750 (37%), Positives = 427/750 (56%), Gaps = 40/750 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S + KSG+L  AR++FN M  R AV+   L+ G  ++    EA KLF+DM +     P
Sbjct: 249 LVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308

Query: 72  DYVTFATLLSGCSEPDTANEL-----IQVHADIIKFGYNSILI-ICNSLVDSYCKIRCLD 125
           +  ++  LLS   E   A E+      +VH  +I  G    ++ I N LV+ Y K   + 
Sbjct: 309 E--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ARRVF  M +KDSVS+N++ITG  +     EA++ +  M+     P  FT  +++S+  
Sbjct: 367 DARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCA 426

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L    LG+Q+H   +K     NV V+NAL+ LY++  C+ E RK+F  MPE D VS+N 
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNS 486

Query: 246 MITCYAWNEQ-YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +I   A +E+   E++  F          ++  FS++LS V++    ++G+QIH   +  
Sbjct: 487 IIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKY 546

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNL 363
               E    N+L+  Y KCG  +  ++IF+ +S     V W +MIS Y+    L +AL+L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDL 606

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
              M +     D   +A++L A A +A+L  G ++H+  +R+   S+V  GSAL+DMY+K
Sbjct: 607 VWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLS 482
            G L  A++ F  MP                          F +M   G   PD V+ + 
Sbjct: 667 CGRLDYALRFFNTMP-------------------------LFANMKLDGQTPPDHVTFVG 701

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG ++F SM+  Y L P+ EH++ M D+L R+G  D+ E  + +MP +
Sbjct: 702 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMK 761

Query: 543 PDEIMWSSVINS-CRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           P+ ++W +V+ + CR + +  E  KKAA+ LF++E   +A  YV + N+YA  G+WE + 
Sbjct: 762 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP-ENAVNYVLLGNMYAAGGRWEDLV 820

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           + +K M++  V+K   YSWV +K  VH+F A D+ HP  + I +K++ L ++M+  GY P
Sbjct: 821 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 880

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS-PILVMKNLRACTDCHAAIKLI 719
            T  AL+D ++E K E L YHSE+LA+AF L      + PI +MKNLR C DCH+A K I
Sbjct: 881 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHI 940

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SKI GR+I +RDS+RFHHF+DG CSC DFW
Sbjct: 941 SKIEGRQIILRDSNRFHHFQDGECSCSDFW 970



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/577 (29%), Positives = 298/577 (51%), Gaps = 18/577 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y+++G+  +AR++F+ M  R  VSW  ++ GYS+  + +EA     DM  +G  
Sbjct: 40  NNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVF 99

Query: 70  DPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKI-RCLDL 126
              Y  F + L  C E D+   L   Q+H  + K  Y    ++ N L+  Y K    L  
Sbjct: 100 SNHY-AFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGY 158

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A R F ++  K+SVS+N++I+ +++ G    A K+F  MQ  G +P+++TF + ++    
Sbjct: 159 ALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACS 218

Query: 187 LA--DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           L   D+ L  Q+   + K+ F+ ++FV + L+  ++K   ++ ARK+F +M   + V+ N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLN 278

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS-----VVANKLDLQIGRQIHT 299
            ++      +  +E+ KLF ++  +  D S   +  LLS      +A ++ L+ GR++H 
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             I T  +   V + N LV+MYAKCG   +A+ +F  ++   +V W +MI+   Q     
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFI 397

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EA+  +  M R  I     T  S + + A L    LG+Q+H   ++ G   NV   +AL+
Sbjct: 398 EAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA-QATLKSFEDMVQSGYQPDS 477
            +YA++G L +  + F  MPE + VSWN++I A A +  +    +  F + +++G + + 
Sbjct: 458 TLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNR 517

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++  SVLSA S     E G Q  + +  KY +  +     +++    + G  D  EK+ +
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQ-IHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFS 576

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +M    D++ W+S+I S  IH   E   KA D ++ M
Sbjct: 577 RMSERRDDVTWNSMI-SGYIHN--ELLAKALDLVWFM 610



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           H+ + K G    + +CN+L+++Y +      AR+VF EMP ++ VS+  +++G+++ G +
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL--GRQVHAFVVKTNFVENVFVAN 213
           +EA+    +M   G   + + F +AL A   L  + +  GRQ+H  + K ++  +  V+N
Sbjct: 84  KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143

Query: 214 ALLDLYSK-HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
            L+ +Y K    +  A + F ++   + VS+N +I+ Y+     + + K+F  +Q     
Sbjct: 144 VLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSR 203

Query: 273 RSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            +++ F +L++   +  + D+++  QI      +  ++++ V + LV  +AK G    A+
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHAR 263

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR-----A 385
           +IF  +   + V    ++   V++   EEA  LF++M  + I     ++  +L      +
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYS 322

Query: 386 SAELASLSLGKQLHSFVIRSG---FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
            AE   L  G+++H  VI +G   FM  +  G+ L++MYAK GS+ DA + F  M E++ 
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGI--GNGLVNMYAKCGSIADARRVFCFMTEKDS 380

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSWN++I+   QN      ++ ++ M +    P S +L+S +S+C+     + G Q  + 
Sbjct: 381 VSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLG-QQIHG 439

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            + K  +        +++ +   +GC +E  K+ + MP E D++ W+S+I +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 51/92 (55%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           K  HS + ++G   +V+  + L++ Y ++G    A + F EMP RN VSW  ++S  ++N
Sbjct: 21  KLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRN 80

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           G+ +  L    DMV+ G   +  + +S L AC
Sbjct: 81  GEHKEALVFLRDMVKEGVFSNHYAFVSALRAC 112


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/742 (33%), Positives = 426/742 (57%), Gaps = 10/742 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  A++LF+ M +R+ +S+ ILI GY     + +A  LF + R       D  +
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARM-ACLKLDKFS 112

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A +LS C +         +H   I  G    + + N L+D YCK   +D AR +F+   
Sbjct: 113 YAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSD 172

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL-SAGVGLAD-IALG 193
           + D+VS+N+LITG+A+ G  EE +KL V+M H G + + FT  +AL S  + L + ++ G
Sbjct: 173 ELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           + +H + VK     ++ V  ALLD+Y+K   + +A +LF   P  + V YN MI  +   
Sbjct: 233 KTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQT 292

Query: 254 EQYK-----ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           E        E+LKLF ++Q      S F FS+++ +  +    + G+QIH         S
Sbjct: 293 EDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  + ++L+++Y+  G  E+  + F +   +  V WT MI+ Y Q G  E AL LF E+ 
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            +    D+    ++L A A++A+   G+Q+H + +++G  +     ++ + MYAKSG+L 
Sbjct: 413 ASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLD 472

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A  TF+E+   ++VSW+ +I + AQ+G A+  +  FE M   G  P+ ++ L VL+ACS
Sbjct: 473 SAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS 532

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+EEGL+Y+ SM + Y ++   +H   +VD+L R+G   +A+  +    F    +MW
Sbjct: 533 HGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMW 592

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            ++++ CRI+K++   K  A++L +++  ++++ YV + NIY  AG     +++++ M++
Sbjct: 593 RTLLSGCRIYKDIVTGKHVAEKLIELDP-QESSSYVLLYNIYTDAGIDLPATKIRELMKD 651

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           RG+RK    SW+E+ ++VH F   D  HP +  I +K+E ++++ +K GY       +  
Sbjct: 652 RGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTI 711

Query: 669 EDEEIK-VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
             +E+K    + +HSE+LA++F +++ P  +P+ VMKNLR C DCHA +KLIS +  REI
Sbjct: 712 STKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREI 771

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDS RFHHFK+G CSC D+W
Sbjct: 772 ILRDSLRFHHFKEGSCSCNDYW 793



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 262/522 (50%), Gaps = 21/522 (4%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V +  L+   S+  ++      HA +IK  +N  L + N+ ++ Y K   +  A+++F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M ++  +S+N LI+G+   G   +AI LF E +    K   F++A  LSA   + D A
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LG+ +H   +     + VF+ N L+D+Y K + +  AR LF    E+D VS+N +IT YA
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISE 309
               Y+E LKL  ++  T    + F   + L      L+  +  G+ +H  T+      +
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE-----EALNLF 364
           + V  +L+DMYAK G   +A ++F    + + V + AMI+ ++Q  +++     EAL LF
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLF 307

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M R  I     TF+SI++    + +   GKQ+H+ + +    S+ F GS L+++Y+  
Sbjct: 308 SQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLL 367

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS +D ++ F   P+ +IVSW  +I+  AQNG  ++ L  F +++ SG +PD   + ++L
Sbjct: 368 GSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTML 427

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMP 540
           SAC+       G Q        Y ++      A    S + +  +SG  D A+    ++ 
Sbjct: 428 SACADVAAERSGEQ-----VHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             PD + WS +I S   H +     K A  LF++ K     P
Sbjct: 483 -NPDVVSWSVMICSNAQHGH----AKDAINLFELMKSYGIHP 519



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 229/465 (49%), Gaps = 22/465 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            Q    TN+LI  Y K   +  AR LF S  +   VSW  LI GY++   + E  KL V 
Sbjct: 142 GQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVK 201

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSY 118
           M    G   +  T  + L  C      N ++     +H   +K G +  +++  +L+D Y
Sbjct: 202 MHHT-GLRLNAFTLGSALKSCYL--NLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMY 258

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAK-EGLNE----EAIKLFVEMQHLGFKPS 173
            K   L  A ++F+  P ++ V +NA+I GF + E +++    EA+KLF +MQ  G KPS
Sbjct: 259 AKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPS 318

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           DFTF++ +     +     G+Q+HA + K N   + F+ + L++LYS      +  K F 
Sbjct: 319 DFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFN 378

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
             P++D VS+  MI  YA N Q++ +L LF EL  +     +F  +T+LS  A+    + 
Sbjct: 379 STPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERS 438

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           G Q+H   + T   +   V NS + MYAK G  + AK  F  + +   V W+ MI +  Q
Sbjct: 439 GEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQ 498

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVF 412
            G+ ++A+NLF  M    I  +Q TF  +L A +    +  G + +  + +   M  NV 
Sbjct: 499 HGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVK 558

Query: 413 SGSALLDMYAKSGSLKDAIQ-----TFKEMPERNIVSWNALISAC 452
             + ++D+ +++G L DA        F + P    V W  L+S C
Sbjct: 559 HCTCIVDLLSRAGRLLDAKNFILNSGFGDHP----VMWRTLLSGC 599


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/740 (34%), Positives = 408/740 (55%), Gaps = 6/740 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y   G++  AR  F+ +  +   +W  +I  Y++   F  A   F +  +      
Sbjct: 81  LINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQS 140

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  ++  C   D      +VH  ++K G+   + I  S +  Y +   + LA  +F
Sbjct: 141 DHYTFPPVIRACGNLDDGR---KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLF 197

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +D  ++NA+I+GF   G   EA+++F EM+         T ++ L   V L DI 
Sbjct: 198 DNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDII 257

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H + +K     ++FV NAL+++Y+K   +  A  +F +M   D VS+N ++  + 
Sbjct: 258 SGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFE 317

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT-QTIVTTAISEV 310
            N++   +L ++ ++             +L SV A   +    R IH   T     + ++
Sbjct: 318 QNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDI 377

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CR 369
            + N+++DMYAK G  + A+++F  L     + W ++I+ Y Q G   EA++++  M   
Sbjct: 378 ALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYY 437

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +    +Q T+ SIL A ++L +L  G + H  +I++    ++F  + L+DMY K G L D
Sbjct: 438 SGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLAD 497

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A+  F E+P ++ VSWNA+IS    +G     +K F++M   G +PD ++ +S+LSACSH
Sbjct: 498 ALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSH 557

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL++EG   F  M + Y +RP  +HY  MVD+  R+G  ++A   +  MP  PD  +W 
Sbjct: 558 SGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWG 617

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CRIH+N+E  +  +D L K+E   +   YV +SNIYA  G WE V +V+   R+R
Sbjct: 618 ALLGACRIHENVELVRTVSDHLLKVES-ENVGYYVLLSNIYAKLGHWEGVDEVRSLARDR 676

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K   +S +E+  K+ VF   ++ HP+  EI  ++ NL  +MK  GY PD +  L D 
Sbjct: 677 GLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDV 736

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +++ K   L  HSERLA+AF +I+TP  + + + KNLR C DCH A K ISKIT REI V
Sbjct: 737 EDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIV 796

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHFKDG CSC D+W
Sbjct: 797 RDSNRFHHFKDGVCSCGDYW 816



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 197/429 (45%), Gaps = 24/429 (5%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + L +Q+HA +V +   +++F++  L++ Y+    +  AR  F ++   D  ++N MI+ 
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 250 YAWNEQYKESLKLFRELQFTRFDRS-QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           YA    +  ++  F E   T F +S  + F  ++    N   L  GR++H   +      
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFEC 172

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V +A S +  Y++ G    A  +F N+       W AMIS +   G + EAL +F EM 
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             ++S D  T +S+L    +L  +  G  +H + I+ G   ++F  +AL++MYAK G L+
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F +M  R+IVSWN+L++A  QN      L  +  M   G  PD ++L+S+ S  +
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
             G           +T++           +++D+  + G  D A K+   +P + D I W
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISW 411

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV-------SQ 601
           +S+I     +     A +A D    M     A P           G W S+         
Sbjct: 412 NSLITG---YSQNGLANEAIDVYSSMRYYSGAVPN---------QGTWVSILTAHSQLGA 459

Query: 602 VKKAMRERG 610
           +K+ M+  G
Sbjct: 460 LKQGMKAHG 468



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 180/355 (50%), Gaps = 9/355 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K G L +A  +FN M  R  VSW  L+  + Q  +   A  ++  M +  G 
Sbjct: 279 NALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSI-GV 337

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCLDL 126
            PD +T  +L S  +E         +H  + +   F ++  + + N+++D Y K+  +D 
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHD--IALGNAIIDMYAKLGFIDS 395

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGV 185
           AR+VF+ +P KD +S+N+LITG+++ GL  EAI ++  M++  G  P+  T+ + L+A  
Sbjct: 396 ARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHS 455

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L  +  G + H  ++K     ++FV+  L+D+Y K   + +A  LF E+P    VS+N 
Sbjct: 456 QLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNA 515

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+C+  +    +++KLF+E+Q          F +LLS  ++   +  G+        T 
Sbjct: 516 IISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETY 575

Query: 306 AI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
            I   +K    +VD++ + G  E+A     N+     V  W A++ A     N+E
Sbjct: 576 GIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVE 630


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/725 (36%), Positives = 415/725 (57%), Gaps = 9/725 (1%)

Query: 29  FNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDT 88
           F+ +    A+ W IL+   ++   F  +  LF  M + G  + D  TF+ +    S   +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRS 59

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
            +   Q+H  I+K G+     + NSLV  Y K + +D AR+VF EM ++D +S+N++I G
Sbjct: 60  VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD---IALGRQVHAFVVKTNF 205
           +   GL E+ + +FV+M   G    +   A  +S   G AD   I+LGR VH+  VK  F
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
                  N LLD+YSK   +  A+ +F EM +   VSY  MI  YA      E++KLF E
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           ++        +  + +L+  A    L  G+++H          ++ V+N+L+DMYAKCG 
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRANISADQATFASILR 384
            +EA+ +F+ +     + W  +I  Y +     EAL+LF + +     S D+ T A +L 
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A A L++   G+++H +++R+G+ S+    ++L+DMYAK G+L  A   F ++  +++VS
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           W  +I+    +G  +  +  F  M Q+G + D +S +S+L ACSH GL++EG ++FN M 
Sbjct: 417 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            + K+ P  EHYA +VD+L R+G   +A + +  MP  PD  +W +++  CRIH +++ A
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 536

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           +K A+++F++E   +   YV M+NIYA A +WE V +++K + +RG+RK    SW+E+K 
Sbjct: 537 EKVAEKVFELEP-ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 595

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
           +V++F A D  +P+T  I   +  +   M +EGY P T  AL D +E  K E+L  HSE+
Sbjct: 596 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 655

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LA+A  +I++  G  I V KNLR C DCH   K +SK+T REI +RDS+RFH FKDG CS
Sbjct: 656 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 715

Query: 745 CRDFW 749
           CR FW
Sbjct: 716 CRGFW 720



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/470 (31%), Positives = 247/470 (52%), Gaps = 5/470 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+V  N L++ Y+K+  + +AR++F+ M +R  +SW  +I GY       +   +FV M
Sbjct: 78  RNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 136

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G + D  T  ++ +GC++    +    VH+  +K  ++     CN+L+D Y K   
Sbjct: 137 LVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 195

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A+ VF+EM  +  VS+ ++I G+A+EGL  EA+KLF EM+  G  P  +T  A L+ 
Sbjct: 196 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 255

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G++VH ++ + +   ++FV+NAL+D+Y+K   + EA  +F EM   D +S+
Sbjct: 256 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 315

Query: 244 NVMITCYAWNEQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N +I  Y+ N    E+L LF   L+  RF   +   + +L   A+      GR+IH   +
Sbjct: 316 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 375

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S+  VANSLVDMYAKCG    A  +F +++    V WT MI+ Y   G  +EA+ 
Sbjct: 376 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 435

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF +M +A I AD+ +F S+L A +    +  G +  + +         V   + ++DM 
Sbjct: 436 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 495

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           A++G L  A +  + MP   +   W AL+  C  + D +   K  E + +
Sbjct: 496 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 385/661 (58%), Gaps = 9/661 (1%)

Query: 95  VHADIIKFGYNSIL--IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           VHA I++  +++ L   +CN LV+ Y K+   + A+ V      +  V++ +LI+G    
Sbjct: 29  VHAHILR-THDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHN 87

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
                A+  F  M+     P+DFTF     A   L     G+Q+HA  +K   + +VFV 
Sbjct: 88  RRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVG 147

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
            +  D+YSK     EAR +F EMP  +  ++N  ++    + +  +++  F++      +
Sbjct: 148 CSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGE 207

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            +   F   L+  A+ + L++GRQ+H   + +    +V V N L+D Y KCG    ++ +
Sbjct: 208 PNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELV 267

Query: 333 FANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           F+ +     + V W ++++A VQ    E A  +F++  R  +       +S+L A AEL 
Sbjct: 268 FSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELG 326

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L LG+ +H+  +++    N+F GSAL+D+Y K GS++ A Q F+EMPERN+V+WNA+I 
Sbjct: 327 GLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIG 386

Query: 451 ACAQNGDAQATLKSFEDMVQS--GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
             A  GD    L  F++M     G     V+L+SVLSACS  G +E GLQ F SM  +Y 
Sbjct: 387 GYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYG 446

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P  EHYA +VD+L RSG  D A + + +MP  P   +W +++ +C++H   +  K AA
Sbjct: 447 IEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAA 506

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
           ++LF+++   D+  +V  SN+ A AG+WE  + V+K MR+ G++K   YSWV +K++VHV
Sbjct: 507 EKLFELDP-DDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHV 565

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F A D  H + +EI+  +  L  EMKK GY PD + +L D +EE K   + YHSE++A+A
Sbjct: 566 FQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALA 625

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F LI  P G PI + KNLR C DCH+AIK ISKI GREI VRD++RFH FKDG+CSC+D+
Sbjct: 626 FGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDY 685

Query: 749 W 749
           W
Sbjct: 686 W 686



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 223/457 (48%), Gaps = 10/457 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           N L++ Y K  +L  + +L  S+ + RT V+WT LI G     +F  A   F +MR +  
Sbjct: 47  NHLVNMYSKL-DLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECV 105

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              D+ TF  +    +         Q+HA  +K G    + +  S  D Y K      AR
Sbjct: 106 LPNDF-TFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEAR 164

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F EMP ++  ++NA ++   ++G   +AI  F +   +  +P+  TF A L+A   + 
Sbjct: 165 NMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIV 224

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM--PEVDGVSYNVM 246
            + LGRQ+H F+V++ + E+V V N L+D Y K   +V +  +F  +     + VS+  +
Sbjct: 225 SLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSL 284

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +     N + + +  +F + +    + + F  S++LS  A    L++GR +H   +    
Sbjct: 285 LAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALALKACV 343

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              + V ++LVD+Y KCG  E A+++F  +   + V W AMI  Y   G+++ AL+LF E
Sbjct: 344 EENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQE 403

Query: 367 MCRAN--ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAK 423
           M   +  I+    T  S+L A +   ++  G Q+  S   R G        + ++D+  +
Sbjct: 404 MTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGR 463

Query: 424 SGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           SG +  A +  K MP    +S W AL+ AC  +G  +
Sbjct: 464 SGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK 500



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 192 LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           LGR VHA +++T+      F+ N L+++YSK D    A+ +         V++  +I+  
Sbjct: 25  LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N ++  +L  F  ++      + F F  +    A+      G+Q+H   +    I +V
Sbjct: 85  VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  S  DMY+K G   EA+ +F  + H +   W A +S  VQ G   +A+  F +    
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           +   +  TF + L A A++ SL LG+QLH F++RS +  +V   + L+D Y K G +  +
Sbjct: 205 DGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSS 264

Query: 431 IQTFKEM--PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
              F  +    RN+VSW +L++A  QN + +     F    +   +P    + SVLSAC+
Sbjct: 265 ELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACA 323

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
             G +E G +  +++  K  +       +++VD+  + G  + AE++  +MP E + + W
Sbjct: 324 ELGGLELG-RSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP-ERNLVTW 381

Query: 549 SSVINS 554
           +++I  
Sbjct: 382 NAMIGG 387



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 48/241 (19%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    + L+  Y K G++  A ++F  M +R  V+W  +IGGY+       A  LF +M
Sbjct: 345 ENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEM 404

Query: 64  RTDG-GSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKI 121
            +   G    YVT  ++LS CS        +Q+   +  ++G          +VD   + 
Sbjct: 405 TSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRS 464

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITG--------------------------------- 148
             +D A    K MP   ++S    + G                                 
Sbjct: 465 GLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFS 524

Query: 149 --FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
              A  G  EEA  +  EM+ +G K +           VG + +A+  +VH F  K +F 
Sbjct: 525 NMLASAGRWEEATIVRKEMRDIGIKKN-----------VGYSWVAVKNRVHVFQAKDSFH 573

Query: 207 E 207
           E
Sbjct: 574 E 574


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/738 (34%), Positives = 397/738 (53%), Gaps = 55/738 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YV  G+L   R +F+ + +     W +L+ GY++   FRE+  LF  MR  G    
Sbjct: 142 LVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG---- 197

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                                                            IR ++ AR++F
Sbjct: 198 -------------------------------------------------IRRVESARKLF 208

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+  +D +S+N++I+G+   GL+E+ + LF +M  LG      T  + ++       + 
Sbjct: 209 DELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLL 268

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR +H + +K +F + + + N LLD+YSK   +  A ++F  M E   VS+  MI  YA
Sbjct: 269 LGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYA 328

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                  S++LF E++        F  +T+L   A    L+ G+ +H         S++ 
Sbjct: 329 REGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLF 388

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+L+DMYAKCG   +A  +F+ +     V W  MI  Y +     EALNLF+EM + N
Sbjct: 389 VSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYN 447

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              +  T A IL A A LA+L  G+++H  ++R+GF  +    +AL+DMY K G+L  A 
Sbjct: 448 SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLAR 507

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  +PE+++VSW  +I+    +G     + +F +M  SG +PD VS +S+L ACSH G
Sbjct: 508 LLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSG 567

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG  +FN M     + PK EHYA +VD+L R+G   +A K +  MP EPD  +W ++
Sbjct: 568 LLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 627

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +  CRI+ +++ A+K A+ +F++E   +   YV ++NIYA A +WE V ++++ +  RG+
Sbjct: 628 LCGCRIYHDVKLAEKVAEHVFELEP-ENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGL 686

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    SW+E+K KVH+F   D  HP  N+I   ++     MK+EG+ P    AL   D+
Sbjct: 687 RKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADD 746

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K  +L  HSE++A+AF +++ P G  + V KNLR C DCH   K +SK+  R+I +RD
Sbjct: 747 TEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRD 806

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+RFHHFKDG CSCR  W
Sbjct: 807 SNRFHHFKDGSCSCRGHW 824



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 244/503 (48%), Gaps = 24/503 (4%)

Query: 3   NQNTVSTNMLISGYVKSGN------------------LATARELFNSMVDRTAVSWTILI 44
           N+     N+L++GY K GN                  + +AR+LF+ + DR  +SW  +I
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223

Query: 45  GGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY 104
            GY       +   LF  M   G  + D  T  ++++GCS          +H   IK  +
Sbjct: 224 SGYVSNGLSEKGLDLFEQMLLLG-INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
              L + N L+D Y K   L+ A +VF+ M ++  VS+ ++I G+A+EGL++ +++LF E
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+  G  P  FT    L A      +  G+ VH ++ +     ++FV+NAL+D+Y+K   
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A  +F EM   D VS+N MI  Y+ N    E+L LF E+Q+     S    + +L  
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNS-ITMACILPA 461

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A+   L+ G++IH   +      +  VAN+LVDMY KCG    A+ +F  +     V W
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           T MI+ Y   G   EA+  F EM  + I  D+ +F SIL A +    L  G    + +  
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 581

Query: 405 SGFMSNVFSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
           +  +       A ++D+ A++G+L  A +  K MP E +   W AL+  C    D +   
Sbjct: 582 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAE 641

Query: 463 KSFEDMVQSGYQPDSVSLLSVLS 485
           K  E + +   +P++     +L+
Sbjct: 642 KVAEHVFE--LEPENTGYYVLLA 662



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 205/433 (47%), Gaps = 54/433 (12%)

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGE 234
           T+ + L     L  I  GR++H+ ++++N VE +  + + L+ +Y     + E R++F +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHS-IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLF---RELQFTRFDRSQFPF------------- 278
           +       +N+++  YA    ++ESL LF   REL   R + ++  F             
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221

Query: 279 ------------------------------STLLSVVA---NKLDLQIGRQIHTQTIVTT 305
                                         +T++SVVA   N   L +GR +H   I  +
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              E+ + N L+DMY+K G    A ++F  +   S V WT+MI+ Y ++G  + ++ LF 
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM +  IS D  T  +IL A A    L  GK +H+++  +   S++F  +AL+DMYAK G
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S+ DA   F EM  ++IVSWN +I   ++N      L  F +M Q   +P+S+++  +L 
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILP 460

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+    +E G Q  +    +      +    ++VD+  + G    A  L   +P E D 
Sbjct: 461 ACASLAALERG-QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP-EKDL 518

Query: 546 IMWSSVINSCRIH 558
           + W+ +I    +H
Sbjct: 519 VSWTVMIAGYGMH 531



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 57/363 (15%)

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           YN+ I  +      + +++L    Q  + D     + ++L + A+   +Q GR+IH+  I
Sbjct: 71  YNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHS--I 126

Query: 303 VTTAISEVK--VANSLVDMYAKCG------------------------------------ 324
           + +   EV   + + LV MY  CG                                    
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186

Query: 325 -------------RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
                        R E A+++F  L     + W +MIS YV  G  E+ L+LF +M    
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ D AT  S++   +    L LG+ LH + I++ F   +   + LLDMY+KSG+L  AI
Sbjct: 247 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F+ M ER++VSW ++I+  A+ G +  +++ F +M + G  PD  ++ ++L AC+  G
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+E G    N + +  K++       +++D+  + G   +A  + ++M  + D + W+++
Sbjct: 367 LLENGKDVHNYIKEN-KMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTM 424

Query: 552 INS 554
           I  
Sbjct: 425 IGG 427


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/719 (35%), Positives = 408/719 (56%), Gaps = 42/719 (5%)

Query: 69  SDPDYVTFA-----TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           SDP Y          LLS C    T     Q+HA IIK G ++ L   + L++     R 
Sbjct: 20  SDPPYRVLQEHPSLKLLSKCQSIRT---FKQIHAHIIKTGLHNTLFALSKLIEFSAVSRS 76

Query: 124 LDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            D+  A  +F  + + +   +N++I G +       A+  FV M + G +P+ +TF   L
Sbjct: 77  GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK----------------HDCV 225
            +   LA    G+Q+HA V+K  FV +VF+  +L+++Y++                 D +
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196

Query: 226 V---------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                            AR+LF EMP  D VS+N MI  YA   + KE+L LF +++   
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              ++    ++LS  A    L +G  + +        S +K+ N+L+DMY+KCG  + A+
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 316

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           E+F ++     + W  MI  Y    + +EAL LF EM  + +   + TF SIL + A L 
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLG 376

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           ++ LGK +H+++ ++    +    ++L+D+YAK G++  A Q F  M  +++ SWNA+I 
Sbjct: 377 AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A +G A    + F  M   G +P+ ++ + +LSAC H GL++ G Q+F+SM Q YK+ 
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS 496

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           PK +HY  M+D+L R+G F+EAE L+  M  +PD  +W S++ +CR H  +E  +  A++
Sbjct: 497 PKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAER 556

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF++E     A YV +SNIYA AG+W+ V++++  + +RG++KV   + +E+ + VH F 
Sbjct: 557 LFELEPDNPGA-YVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFL 615

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D++HPQ+ +I R +E + +++K  G+  DTS  L+D DEE K  +L +HSE+LAIAF 
Sbjct: 616 VGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFG 675

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+PI ++KNLR C +CH+A KLISKI  REI  RD +RFHHFKDG CSC D+W
Sbjct: 676 LISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 235/478 (49%), Gaps = 38/478 (7%)

Query: 14  SGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDY 73
           S   +SG+++ A  LFNS+ +     W  +I G S       A   FV M    G +P+ 
Sbjct: 71  SAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRM-IYSGVEPNS 129

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK------------- 120
            TF  LL  C++  +A+E  Q+HA ++K G+ S + I  SL++ Y +             
Sbjct: 130 YTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQ 189

Query: 121 ------------------IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
                                +D AR++F EMP KD VS+NA+I G+A+ G ++EA+ LF
Sbjct: 190 SNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLF 249

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            +M+     P++ T  + LSA      + LG  + +++       N+ + NAL+D+YSK 
Sbjct: 250 EDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC 309

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             +  AR+LF +M E D +S+NVMI  Y     YKE+L LFRE+  +  + ++  F ++L
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSIL 369

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A+   + +G+ IH             ++ SL+D+YAKCG    A+++F  +   S  
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA 429

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W AMI      G  ++A  LF +M    I  ++ TF  IL A      + LG+Q  S +
Sbjct: 430 SWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSM 489

Query: 403 IRSGFMSNVFSG-SALLDMYAKSGSLKDA---IQTFKEMPERNIVSWNALISACAQNG 456
           ++   +S        ++D+  ++G  ++A   +Q  +  P+  I  W +L+ AC  +G
Sbjct: 490 VQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAI--WGSLLGACRDHG 545



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 185/357 (51%), Gaps = 3/357 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ +S   LI+GY   G +  AR+LF+ M  +  VSW  +I GY+Q  + +EA  LF DM
Sbjct: 193 RDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM 252

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R      P+  T  ++LS C++ +  +    + + I   G  S L + N+L+D Y K   
Sbjct: 253 RK-ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGD 311

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  AR +F +M ++D +S+N +I G+      +EA+ LF EM   G +P++ TF + L +
Sbjct: 312 LQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPS 371

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  I LG+ +HA++ K     +  ++ +L+DLY+K   +V AR++F  M      S+
Sbjct: 372 CAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI   A + Q  ++ +LF ++     + ++  F  +LS   +   + +G+Q  +  + 
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491

Query: 304 TTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
              IS + +    ++D+  + G FEEA+ +  N+        W +++ A    G +E
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVE 548


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/646 (35%), Positives = 392/646 (60%), Gaps = 3/646 (0%)

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
           NSI+ + NSL++ Y K+  + +A  +F  MP+++ VS++AL+TG+   G + + I+L  +
Sbjct: 64  NSIIEV-NSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKD 122

Query: 165 MQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
           M   G   P+++  A A+S+      +  GRQ H  ++KT F  + +V NAL+ +YSK  
Sbjct: 123 MISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCS 182

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            V +A  ++ E+P  D V+YN +++    N   +E L++ R +        +  F    S
Sbjct: 183 IVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFS 242

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
           + A+  DL++G  +H + + +    +  V++++++MY KCG+   A+ +F  L   + V 
Sbjct: 243 LCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVL 302

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WTA++++  Q G  EEALNLF +M + N+ +++ T+A +L A A L++   G  LH    
Sbjct: 303 WTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSE 362

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           +SGF  +V  G+AL++MYAKSG ++ A + F +M  R+I++WNA+I   + +G  +  L 
Sbjct: 363 KSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALL 422

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F+DM+ +   P+ V+   VLSAC H GL++EG  Y + + +++ ++P  EHY  +V +L
Sbjct: 423 VFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLL 482

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            ++G  +EA   M   P + D + W +++N+C +H+N    +  A+ + +M+   D   Y
Sbjct: 483 SKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDP-NDVGTY 541

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
             +SNIYA   +W+ V +V+K MR++ ++K    SW+E+ +  H+FT+ D  HP   +  
Sbjct: 542 TLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTY 601

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
           +K++ L+  +K  GY PD    LHD ++E K   L YHSE+LAIA+ L+  P  + ILV+
Sbjct: 602 QKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVI 661

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C DCH+A++LISK+T R I VRD++RFHHF+DG CSC D+W
Sbjct: 662 KNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 223/449 (49%), Gaps = 4/449 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +  N LI+ Y K   ++ A  LF+ M +R  VSW+ L+ GY       +  +L  DM ++
Sbjct: 67  IEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISE 126

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   P+    A  +S C +     E  Q H  ++K G++    + N+LV  Y K   +  
Sbjct: 127 GNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQD 186

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  V+ E+P  D V++N++++   + G   E +++   M     K    TF  A S    
Sbjct: 187 AMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCAS 246

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN-V 245
           L D+ LG  VH  ++ ++   + +V++A++++Y K    + AR +F  +   + V +  V
Sbjct: 247 LKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAV 306

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M +C+  N  ++E+L LF +++      ++F ++ LL+  A     + G  +H  +  + 
Sbjct: 307 MASCFQ-NGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSG 365

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
               V V N+L++MYAK G  E AK++F+++ H   + W AMI  +   G  ++AL +F 
Sbjct: 366 FKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQ 425

Query: 366 EMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +M  A    +  TF  +L A   L  +  G   LH  + + G    +   + ++ + +K+
Sbjct: 426 DMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKT 485

Query: 425 GSLKDAIQTFKEMPER-NIVSWNALISAC 452
           G L +A    +  P + ++V+W  L++AC
Sbjct: 486 GQLNEARNFMRTAPVKWDVVAWRTLLNAC 514



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 209/452 (46%), Gaps = 22/452 (4%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHA-FVVKTNFVENVFV-ANALLDLYSKHDCVVEAR 229
           P D      LSA     ++ +G+ +H+  +V +   EN  +  N+L++ Y+K + V  A 
Sbjct: 29  PLDLIKLLKLSADT--KNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAH 86

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANK 288
            LF  MPE + VS++ ++T Y  N    + ++L +++        +++  +  +S   ++
Sbjct: 87  NLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDR 146

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             ++ GRQ H   + T       V N+LV MY+KC   ++A  ++  +     V + +++
Sbjct: 147 GRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSIL 206

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           S+ V+ G L E L +   M   ++  D+ TF +     A L  L LG  +H  ++ S   
Sbjct: 207 SSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVE 266

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            + +  SA+++MY K G    A   F  +  RN+V W A++++C QNG  +  L  F  M
Sbjct: 267 CDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILC 524
            Q   + +  +   +L+AC+       G     S+   +  +   +H+     +++++  
Sbjct: 327 EQENVKSNEFTYAVLLNACAGLSARRNG-----SLLHGHSEKSGFKHHVMVGNALINMYA 381

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           +SG  + A+K+ + M    D I W+++I     H      KKA      M    +   YV
Sbjct: 382 KSGDIEAAKKVFSDM-MHRDIITWNAMICGFSHHG---LGKKALLVFQDMLAAEEHPNYV 437

Query: 585 AMSNIYAVAGQWESVSQ----VKKAMRERGVR 612
             + + +  G    V +    +   M++ GV+
Sbjct: 438 TFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQ 469


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/759 (35%), Positives = 420/759 (55%), Gaps = 23/759 (3%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  +    N L++ Y + G    AR L + M  R AVS+ +LI  YS++     + +   
Sbjct: 39  PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
             R   G D D  ++A  L+ CS          VHA  I  G +S + + NSLV  Y K 
Sbjct: 99  RARR-AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKC 157

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  ARRVF    ++D VS+N+L++G+ + G  EE +++F  M+  G   + F   + +
Sbjct: 158 GEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI 217

Query: 182 S--AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
              +G G   + +   VH  V+K     +VF+ +A++D+Y+K   +VEA  LF  + E +
Sbjct: 218 KCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277

Query: 240 GVSYNVMITCYAWNEQY------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            V +N MI  +   E         E+L L+ E+Q      ++F FS++L        L+ 
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           G+QIH Q I  T   +  + ++L+D+Y   G  E+    F +      V WTAM+S  VQ
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               E+AL+LF E   A +  D  T +S++ A A LA    G+Q+  F  +SGF      
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G++ + MYA+SG +  A + F+EM   ++VSW+A+IS  AQ+G A+  L  F++MV +  
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ ++ L VL+ACSH GL++EGL+Y+ +MT+ Y L P  +H   +VD+L R+G   +AE
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
             ++   F  D ++W S++ SCRIH++LE  +  A+++ ++E    +A YV + N+Y  A
Sbjct: 578 AFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT-SSASYVILYNMYLDA 636

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+    S+ +  M++RGV+K    SW+ELK  VH F A D+ HP+++ I  K+E ++  +
Sbjct: 637 GELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRI 696

Query: 654 KKEGYKPDTSCALHDEDEEIKVES---LKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           +K          L   D EI       +  HSE+LA+A  +I+ P+ +PI VMKNLR C 
Sbjct: 697 EK----------LATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCR 746

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH+ +KLISK   REI +RD  RFHHF+DG CSC D+W
Sbjct: 747 DCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/747 (33%), Positives = 424/747 (56%), Gaps = 10/747 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N ++  Y K G++A+AR  F+++  +   SW  ++  Y+Q   +R A  L+  M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNSILIICNSLVDSYCKIRC 123
                 P+ V + T+L  C+      E   +H+ I    G    +I+ NSL+  Y K   
Sbjct: 117 LQ----PNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ A+R+F+ M  +   S+NA+I  +A+ G  EEAI+L+ +M     +PS  TF + LSA
Sbjct: 173 LEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLSA 229

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +  GR++HA +       ++ + NALL +Y++  C+ +A K+F  +P  D VS+
Sbjct: 230 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSW 289

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI  +A  + + E+++ + ++Q      + + F+++L   A+  DL+ GR +H Q + 
Sbjct: 290 SAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILG 349

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 +    +LVD+Y   G  +EA+ +F  + +     WT +I  Y ++G+    L L
Sbjct: 350 NGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLEL 409

Query: 364 FIEMCRAN-ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           + EM     + A +  ++ ++ A A L + +  +Q HS +   G +S+    ++L++MY+
Sbjct: 410 YREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYS 469

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + G+L+ A Q F +M  R+ ++W  LI+  A++G+    L  +++M   G +P  ++ + 
Sbjct: 470 RWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 529

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL ACSH GL E+G Q F S+   Y + P   HY+ ++D+L R+G   +AE+L+  MP E
Sbjct: 530 VLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVE 589

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P+++ WSS++ + RIHK+++ A  AA Q+ K++ + D A YV +SN++AV G    ++ V
Sbjct: 590 PNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV-DPASYVLLSNVHAVTGNLAGMASV 648

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M  RGV+K    SW+E+  ++H F   D  HP+  EI  +++ L  ++K+ GY P++
Sbjct: 649 RNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPES 708

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD  E+ K   L+ HSE+LAIAF LI T  G+ + +   LR C DCH+A+K IS I
Sbjct: 709 EEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAI 768

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             REI VRDSSRFH F+DG CSC D+W
Sbjct: 769 ARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 146/264 (55%), Gaps = 10/264 (3%)

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
           DL+  RQIH + I   A + V + N +V  Y KCG    A+  F  ++  +   W +M++
Sbjct: 39  DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLT 97

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFM 408
           AY Q G+   AL+L+  M   ++  +   + ++L A A + +L  GK +HS +  + G  
Sbjct: 98  AYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLK 154

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            +V   ++LL MYAK GSL+DA + F+ M  R++ SWNA+I+A AQ+G  +  ++ +EDM
Sbjct: 155 LDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 214

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
                +P   +  SVLSACS+ GL+++G +  +++              +++ +  R  C
Sbjct: 215 ---DVEPSVRTFTSVLSACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCKC 270

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVI 552
            D+A K+  ++P   D + WS++I
Sbjct: 271 LDDAAKIFQRLP-RRDVVSWSAMI 293



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 40/209 (19%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           +   LR   +L S+   +Q+H  +  SG  S NVF G+ ++  Y K GS+  A   F  +
Sbjct: 30  YRDALRQCQDLESV---RQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDAI 84

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             +N  SW ++++A AQNG  +A L  ++ M     QP+ V   +VL AC+    +EEG 
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGK 141

Query: 498 QYFN--SMTQKYKLRPKKEH-----------------------------YASMVDILCRS 526
              +  S T+  KL    E+                             + +M+    +S
Sbjct: 142 AIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQS 201

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G F+EA +L   M  EP    ++SV+++C
Sbjct: 202 GHFEEAIRLYEDMDVEPSVRTFTSVLSAC 230


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/764 (35%), Positives = 440/764 (57%), Gaps = 33/764 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           + + +  N L++ Y K G++  AR +F+ M   R  VSWT +    ++    +EA  L  
Sbjct: 76  DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-----VHADIIKFGY--NSILIICNSL 114
           +M  + G  P+  T       C       EL +     V    IK G+    + + C +L
Sbjct: 136 EM-LESGLRPNAFTLCAAAHAC----FPGELFRSSGGTVLGFAIKTGFWGTDVSVGC-AL 189

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           +D + +   L  AR+VF  + ++  V +  +IT + + G   +A++LF+ M   GF+P  
Sbjct: 190 IDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDG 249

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------HDCVVEA 228
           +T ++ +SA        LG+Q+H+ V++   V +  V+  L+D+Y+K       +C   A
Sbjct: 250 YTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMEC---A 306

Query: 229 RKLFGEMPEVDGVSYNVMITCYAW-NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           RK+F  MP  + +S+  +I+ Y     Q   +++L  E+     + +   +S+LL   AN
Sbjct: 307 RKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACAN 366

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
             D   GRQIH + ++ T+I  V V  N+LV MYA+ G  EEA++ F  L   + +  ++
Sbjct: 367 LSDQDSGRQIHAR-VMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS 425

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
            I    + G    + +  IE    ++     TFAS+L A+A +   + G+QLH+  I++G
Sbjct: 426 DIG---ETGRSNASWSSQIE--SMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTG 480

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSF 465
           F S+    ++L+ MY++ G L DA + F EM +  N++SW ++ISA A++G A+  L  F
Sbjct: 481 FESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLF 540

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            DM+ SG +P+ V+ ++VLSACSH GL++EG +YF SM + ++L P+ EHYA MVD+L R
Sbjct: 541 HDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLAR 600

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           SG   EA + + +MP + D ++W +++ +CR ++N+E  + AA  +  +E  +D APYV 
Sbjct: 601 SGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEP-QDPAPYVL 659

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+YA  G W+ V++++  MR R + K T  SW+ + + +H F A D  HP+  EI  K
Sbjct: 660 LSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAK 719

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +  L++E+K  GY PDTS  LHD  +++K + L  HSE++A+AF LI T    PI + KN
Sbjct: 720 LAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKN 779

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH+AIK ISK TGREI +RDS+RFH  KDG CSC ++W
Sbjct: 780 LRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 181/360 (50%), Gaps = 17/360 (4%)

Query: 192 LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITC 249
           LGR +H  ++ T  ++ +  VAN+LL +YSK   V  AR++F  M  + D VS+  M  C
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-- 307
              N   +E+L L  E+  +    + F   TL +        ++ R     T++  AI  
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAF---TLCAAAHACFPGELFRS-SGGTVLGFAIKT 176

Query: 308 ----SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               ++V V  +L+DM+A+ G    A+++F  L   + V WT MI+ YVQ G   +A+ L
Sbjct: 177 GFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVEL 236

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F+ M       D  T +S++ A AE  S  LG+QLHS V+R G +S+      L+DMY K
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTK 296

Query: 424 ---SGSLKDAIQTFKEMPERNIVSWNALISACAQ-NGDAQATLKSFEDMVQSGYQPDSVS 479
                S++ A + FK MP  N++SW ALIS   Q  G     ++   +M+    +P+ ++
Sbjct: 297 LQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLT 356

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             S+L AC++    + G Q  ++   K  +        ++V +   SGC +EA K   Q+
Sbjct: 357 YSSLLKACANLSDQDSGRQ-IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 11/270 (4%)

Query: 293 IGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISA 350
           +GR +H + + T  + ++  VANSL+ MY+KCG    A+ +F  +  +   V WTAM   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRA--SAELASLSLGKQLHSFVIRSGFM 408
             + G  +EAL L  EM  + +  +  T  +   A    EL   S G  L  F I++GF 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVL-GFAIKTGFW 179

Query: 409 -SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
            ++V  G AL+DM+A++G L  A + F  + ER +V W  +I+   Q G A   ++ F  
Sbjct: 180 GTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR-- 525
           M++ G++PD  ++ S++SAC+  G    G Q  +S+  +  L         +VD+  +  
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLG-QQLHSLVLRLGLVSDTCVSCGLVDMYTKLQ 298

Query: 526 -SGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
                + A K+  +MP   + + W+++I+ 
Sbjct: 299 MEQSMECARKVFKRMPTH-NVMSWTALISG 327


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/720 (36%), Positives = 394/720 (54%), Gaps = 79/720 (10%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
           +I   +L+ +Y  +  L +AR +F E P   +D+V +NA+ITG++       AI+LF  M
Sbjct: 79  VIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAM 138

Query: 166 QHLGFKPSDFTFAAALSAGVGL-ADIALGRQVHAFVVKTNFVENVFVANALLDLYSK--- 221
           +   F+P DFTFA+ LSA   +  D     Q+H  VVK        V NALL +Y K   
Sbjct: 139 RWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCAS 198

Query: 222 ------HDCVVEARKLFGEMP-------------------------------EVDGVSYN 244
                    +  ARKLF EMP                               E  G+++N
Sbjct: 199 SPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWN 258

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT----- 299
            MI+ Y  +  ++++L LFR+++       +  +++++S  A+     +G+Q+H      
Sbjct: 259 AMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKN 318

Query: 300 -------------QTIVT-----------------TAISEVKVANSLVDMYAKCGRFEEA 329
                         T++T                   + ++   N+L+  Y   GR EEA
Sbjct: 319 ELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEA 378

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           K  FA +   + + WT MIS   Q G  E+AL LF +M       +   FA  + A + L
Sbjct: 379 KSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVL 438

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            +L  G+QLH+ ++  G  S +  G+A++ MYA+ G ++ A   F  MP  + VSWN++I
Sbjct: 439 GALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMI 498

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +A  Q+G     ++ +E M++ G  PD  + L+VLSACSH GL+EEG +YFNSM + Y +
Sbjct: 499 AALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGI 558

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P ++HYA M+D+ CR+G F +A+ ++  MPFE    +W +++  CR H N++   +AA+
Sbjct: 559 APGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAE 618

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +LFK+    D   YV +SN+YA  G+W  V++ +K MR+RGV+K  A SW E+++KVHVF
Sbjct: 619 KLFKLIPQHDGT-YVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVF 677

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
             +D +HP+   I   +E L  EMKK GY PDT   LHD + E K  +L  HSE+LA+AF
Sbjct: 678 LVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAF 737

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L+  P+G+ + V KNLR C DCH AIK +SK+ GREI VRD  RFHHFK+G CSCR++W
Sbjct: 738 GLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 264/568 (46%), Gaps = 95/568 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFN-SMVD-RTAVSWTILIGGYSQKNQFREAFK 58
           +P  + ++   LI+ Y   GNL  ARE+FN + +D R  V +  +I GYS  N    A +
Sbjct: 74  IPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIE 133

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELI--------QVHADIIKFGYNSILII 110
           LF  MR      PD  TFA++LS       A+ LI        Q+H  ++KFG      +
Sbjct: 134 LFRAMRW-ANFQPDDFTFASVLS-------ASTLIFYDERQCGQMHGTVVKFGIEIFPAV 185

Query: 111 CNSLVDSYCK---------IRCLDLARRVFKEMPQKD----------------------- 138
            N+L+  Y K            +  AR++F EMP+++                       
Sbjct: 186 LNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREI 245

Query: 139 --------SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
                    +++NA+I+G+   GL E+A+ LF +M+ LG +  + T+ + +SA       
Sbjct: 246 LDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFF 305

Query: 191 ALGRQVHAFVVKTNFVEN----VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN-- 244
            LG+QVHA+++K     +    + V N L+ LY K+  V  ARK+F EMP  D +++N  
Sbjct: 306 LLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTL 365

Query: 245 -----------------------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
                                        VMI+  A N   +++LKLF +++   ++ + 
Sbjct: 366 LSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPND 425

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           + F+  ++  +    L+ GRQ+H Q +     S + V N+++ MYA+CG  E A+ +F  
Sbjct: 426 YAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLT 485

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +  +  V W +MI+A  Q G+  +A+ L+ +M +  I  D+ TF ++L A +    +  G
Sbjct: 486 MPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEG 545

Query: 396 -KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA 453
            +  +S +   G        + ++D++ ++G   DA      MP E     W AL++ C 
Sbjct: 546 NRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCR 605

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            +G+    +++ E + +   Q D   +L
Sbjct: 606 THGNMDLGIEAAEKLFKLIPQHDGTYVL 633



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 224/535 (41%), Gaps = 119/535 (22%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS---- 242
           L+  +L R VH  V+ + F     + N L+D+Y K    V ARKLF E+P+ D ++    
Sbjct: 26  LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85

Query: 243 -----------------------------YNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
                                        YN MIT Y+       +++LFR +++  F  
Sbjct: 86  ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQP 145

Query: 274 SQFPFSTLLSVVANKL----DLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKC----- 323
             F F+++LS  A+ L    + Q G Q+H  T+V   I     V N+L+ +Y KC     
Sbjct: 146 DDFTFASVLS--ASTLIFYDERQCG-QMHG-TVVKFGIEIFPAVLNALLSVYVKCASSPL 201

Query: 324 -----------------------------------GRFEEAKEIFANLSHISTVPWTAMI 348
                                              G    A+EI   ++    + W AMI
Sbjct: 202 VSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMI 261

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF- 407
           S Y+  G  E+AL LF +M    +  D++T+ S++ A A+     LGKQ+H++++++   
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELN 321

Query: 408 ----------------------------------MSNVFSGSALLDMYAKSGSLKDAIQT 433
                                             + ++ + + LL  Y  +G +++A   
Sbjct: 322 PDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSF 381

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F +MPE+N+++W  +IS  AQNG  +  LK F  M   GY+P+  +    ++ACS  G +
Sbjct: 382 FAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGAL 441

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           E G Q  ++               +M+ +  R G  + A  +   MPF  D + W+S+I 
Sbjct: 442 ENGRQ-LHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIA 499

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           +   H +   A +  +Q+ K   L D   ++ + +  + AG  E  ++   +M E
Sbjct: 500 ALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 166/418 (39%), Gaps = 73/418 (17%)

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           + R +H   I +       + N L+D+Y K   F  A+++F  +     +  T +I+AY 
Sbjct: 31  LARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYS 90

Query: 353 QKGNLEEALNLF-----------------------------IEMCR----ANISADQATF 379
             GNL+ A  +F                             IE+ R    AN   D  TF
Sbjct: 91  ALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTF 150

Query: 380 ASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSG---------SL 427
           AS+L AS  +        Q+H  V++ G    +F    +ALL +Y K            +
Sbjct: 151 ASVLSASTLIFYDERQCGQMHGTVVKFGI--EIFPAVLNALLSVYVKCASSPLVSSSSLM 208

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F EMP+RN   W  LI+   +NGD     +  + M +   QP  ++  +++S  
Sbjct: 209 ASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTE---QP-GIAWNAMISGY 264

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM---PFEPD 544
            H GL E+ L  F  M +   ++  +  Y S++      G F   +++ A +      PD
Sbjct: 265 LHHGLFEDALTLFRKM-RLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPD 323

Query: 545 EIMWSSVINSCRIHKNLEFAK-KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
                SV N+  I    ++ K   A ++F    ++D   +  + + Y  AG+ E      
Sbjct: 324 RDFLLSVGNTL-ITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFF 382

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
             M E+ +      +W  + S +             N    +   L  +MK +GY+P+
Sbjct: 383 AQMPEKNL-----LTWTVMISGL-----------AQNGFGEQALKLFNQMKLDGYEPN 424


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/682 (37%), Positives = 405/682 (59%), Gaps = 18/682 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L S C     A  +     D   F +N+       L+ +Y K   +++A ++F EMP
Sbjct: 49  FLLLYSKCRRLSAARRVFDHTHDCNVFSFNT-------LISAYAKESYVEVAHQLFDEMP 101

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q DSVS+N LI  +A+ G  + A +LF+EM+        FT +  ++A  G+ ++ L RQ
Sbjct: 102 QPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITA-CGI-NVGLIRQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVSYNVMITCYAWNE 254
           +HA  V T     V V NAL+  YSK+  + EAR++F  + E  D VS+N M+  Y  + 
Sbjct: 160 LHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHR 219

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ++L+L+ E+         F  +++L+   N  DL  G Q H + I +       V +
Sbjct: 220 EGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGS 279

Query: 315 SLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNL-EEALNLFIEMCRANI 372
            L+D+Y+KCG    + +++F  +S+   V W  MIS Y    +L +EAL  F ++     
Sbjct: 280 GLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGH 339

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAI 431
             D  +   ++ A + ++S S G+Q+H   ++    SN  S  +AL+ MY+K G+L+DA 
Sbjct: 340 RPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAK 399

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  MPE N VS+N++I+  AQ+G    +L  F+ M++  + P +++ +SVL+AC+H G
Sbjct: 400 TLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTG 459

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E+G  YFN M QK+ + P+  H++ M+D+L R+G   EAE+L+  +PF+P    WS++
Sbjct: 460 RVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSAL 519

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CRIH N+E A KAA++L +++ L +AAPYV ++NIY+  G+ +  + V+K MR+RGV
Sbjct: 520 LGACRIHGNVELAIKAANRLLQLDPL-NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGV 578

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SW+E+  ++H+F A D  HP   +I+  +E +M+++KK GY P+   A    D+
Sbjct: 579 KKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDD 638

Query: 672 EI--KVESLK--YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            +  + E L+  +HSE+LA++F L++T EG PILV KNLR C DCH AIK IS++  REI
Sbjct: 639 RVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREI 698

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
           TVRDS RFH FKDG CSC  +W
Sbjct: 699 TVRDSHRFHCFKDGQCSCGGYW 720



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 252/473 (53%), Gaps = 11/473 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N LIS Y K   +  A +LF+ M    +VS+  LI  Y+++   + AF+LF++MR
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +   D D  T + +++ C        + Q+HA  +  G +S + + N+L+ SY K   L
Sbjct: 133 -EAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189

Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             ARR+F  + + +D VS+N+++  + +     +A++L++EM   G     FT A+ L+A
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVS 242
              + D+  G Q HA ++K+ + +N  V + L+DLYSK   C+++ RK+F E+   D V 
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309

Query: 243 YNVMITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +N MI+ Y+  E    E+L+ FR+LQ             ++S  +N      GRQ+H   
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 302 I-VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           + +    + + V N+L+ MY+KCG   +AK +F  +   +TV + +MI+ Y Q G   ++
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALL 418
           L+LF  M   + +    TF S+L A A    +  GK ++  +++  F     +G  S ++
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSCMI 488

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           D+  ++G L +A +  + +P +     W+AL+ AC  +G+ +  +K+   ++Q
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQ 541



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 37/317 (11%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF----------- 326
           F   L       DL+ G+ +H   I +   +   ++N  + +Y+KC R            
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 327 --------------------EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                               E A ++F  +    +V +  +I+AY ++G+ + A  LF+E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  A +  D  T + I+ A     ++ L +QLH+  + +G  S V  G+AL+  Y+K+G 
Sbjct: 131 MREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188

Query: 427 LKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           LK+A + F  + E R+ VSWN+++ A  Q+ +    L+ + +M   G   D  +L SVL+
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR-SGCFDEAEKLMAQMPFEPD 544
           A ++   +  GLQ F++   K          + ++D+  +  GC  +  K+  ++   PD
Sbjct: 249 AFTNVQDLLGGLQ-FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS-NPD 306

Query: 545 EIMWSSVINSCRIHKNL 561
            ++W+++I+   ++++L
Sbjct: 307 LVLWNTMISGYSLYEDL 323



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 4/130 (3%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           +F   L+       L  GK LH+  I+S   ++ +  +  L +Y+K   L  A + F   
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
            + N+ S+N LISA A+    +   + F++M     QPDSVS  ++++A +  G  +   
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAF 125

Query: 498 QYFNSMTQKY 507
           Q F  M + +
Sbjct: 126 QLFLEMREAF 135



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+      N LI+ Y K GNL  A+ LF++M +   VS+  +I GY+Q     ++  LF
Sbjct: 374 IPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLF 433

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSE 85
             M  +    P  +TF ++L+ C+ 
Sbjct: 434 QRM-LEMDFTPTNITFISVLAACAH 457


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 427/748 (57%), Gaps = 11/748 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N ++  Y K G++A+AR  F+++  +   SW  ++  Y+Q   +R A  L+  M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMD 116

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNSILIICNSLVDSYCKIRC 123
                 P+ V + T+L  C+  +   E   +H+ I    G    +I+ NSL+  Y K   
Sbjct: 117 LQ----PNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 124 LDLARRVFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           L+ A+R+F+ M  + SVS +NA+I  +A+ G  EEAI+L+ +M     +PS  TF + LS
Sbjct: 173 LEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMD---VEPSVRTFTSVLS 229

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  GR++HA +       ++ + NALL +Y++  C+ +A K+F  +P  D VS
Sbjct: 230 ACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVS 289

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MI  +A  + + E+++ + ++Q      + + F+++L   A+  DL+ GR +H Q +
Sbjct: 290 WSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL 349

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                  +    +LVD+Y   G  +EA+ +F  + +     WT +I  Y ++G+    L 
Sbjct: 350 GNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLE 409

Query: 363 LFIEMCRAN-ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           L+ EM     + A +  ++ ++ A A L + +  +Q HS +   G +S+    ++L++MY
Sbjct: 410 LYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMY 469

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           ++ G+L+ A Q F +M  R+ ++W  LI+  A++G+    L  +++M   G +P  ++ +
Sbjct: 470 SRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFM 529

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            VL ACSH GL E+G Q F S+   Y + P   HY+ ++D+L R+G   +AE+L+  MP 
Sbjct: 530 VVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPV 589

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           EP+++ WSS++ + RIHK+++ A  AA Q+ K++ + D A YV +SN++AV G    ++ 
Sbjct: 590 EPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV-DPASYVLLSNVHAVTGNLAGMAS 648

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+  M  RGV+K    SW+E+  ++H F   D  HP+  EI  +++ L  ++K+ GY P+
Sbjct: 649 VRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPE 708

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           +   LHD  E+ K   L+ HSE+LAIAF LI T  G+ + +   LR C DCH+A+K IS 
Sbjct: 709 SEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISA 768

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I  REI VRDSSRFH F+DG CSC D+W
Sbjct: 769 IARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 146/265 (55%), Gaps = 11/265 (4%)

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
           DL+  RQIH + I   A + V + N +V  Y KCG    A+  F  ++  +   W +M++
Sbjct: 39  DLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLT 97

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFM 408
           AY Q G+   AL+L+  M   ++  +   + ++L A A + +L  GK +HS +  + G  
Sbjct: 98  AYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLK 154

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
            +V   ++LL MYAK GSL+DA + F+ M   R++ SWNA+I+A AQ+G  +  ++ +ED
Sbjct: 155 LDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYED 214

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M     +P   +  SVLSACS+ GL+++G +  +++              +++ +  R  
Sbjct: 215 M---DVEPSVRTFTSVLSACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLTMYARCK 270

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVI 552
           C D+A K+  ++P   D + WS++I
Sbjct: 271 CLDDAAKIFQRLP-RRDVVSWSAMI 294



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 41/210 (19%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           +   LR   +L S+   +Q+H  +  SG  S NVF G+ ++  Y K GS+  A   F  +
Sbjct: 30  YRDALRQCQDLESV---RQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDAI 84

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG- 496
             +N  SW ++++A AQNG  +A L  ++ M     QP+ V   +VL AC+    +EEG 
Sbjct: 85  ARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGK 141

Query: 497 -------------------------------LQYFNSMTQKYKLRPKKEHYASMVDILCR 525
                                          L+    + ++   R     + +M+    +
Sbjct: 142 AIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQ 201

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           SG F+EA +L   M  EP    ++SV+++C
Sbjct: 202 SGHFEEAIRLYEDMDVEPSVRTFTSVLSAC 231


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/629 (38%), Positives = 379/629 (60%), Gaps = 24/629 (3%)

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           +++++I  +    L   +   F  M+ L   P+   F + L A   L    L   +HA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 201 VKTNFVENVFVANALLDLYSKH------------------DCVVEARKLFGEMPEVDGVS 242
           V+     ++++ANAL++ Y+K                   DCV   +K+F  MP  D VS
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCV---KKVFDMMPVRDVVS 193

Query: 243 YNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +N +I  +A N  Y E+L + RE+ +  +     F  S++L + A  +D+  G++IH   
Sbjct: 194 WNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYA 253

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +      +V + +SL+DMYAKC R E +   F  L     + W ++I+  VQ G  +  L
Sbjct: 254 VRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             F  M + N+     +F+S++ A A L +LSLG+QLH  ++R GF  N F  S+L+DMY
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMY 373

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G++K A   F  + +R++V+W A+I  CA +G A   +  FE+M++ G +P  V+ +
Sbjct: 374 AKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFM 433

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM-P 540
           +VL+ACSH GL++EG +YFNSM + + + P  EHYA++ D+L R+G  +EA   ++ M  
Sbjct: 434 AVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRG 493

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            +P   +WS ++ +CR HK++E A+K  D+L  ++   +   YV MSNIY+ A +W+  +
Sbjct: 494 VQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDS-ENMGAYVLMSNIYSAAQRWKDAA 552

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  MR++G++K  A SW+E+ ++VH F A D+ HP  ++I + ++ L+++M+KEGY  
Sbjct: 553 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 612

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DT+  LHD DEE+K E L  HSERLAIA+ +I+T  G+ I V+KN+R C DCH AIK I+
Sbjct: 613 DTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFIT 672

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KI GREITVRD+SRFHHFK+G CSC D+W
Sbjct: 673 KIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 167/328 (50%), Gaps = 3/328 (0%)

Query: 26  RELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSE 85
           +++F+ M  R  VSW  +I G++Q   + EA  +  +M  +G   PD  T +++L   +E
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239

Query: 86  PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
               N+  ++H   ++ G++  + I +SL+D Y K   L+ + R F  +P+KD++S+N++
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I G  + G  +  +  F  M     KP   +F++ + A   L  ++LGRQ+H  +V+  F
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
            +N F+A++L+D+Y+K   +  AR +F  + + D V++  +I   A +    +++ LF  
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCG 324
           +           F  +L+  ++   +  G +          I+  ++   ++ D+  + G
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479

Query: 325 RFEEAKEIFANLSHISTVP--WTAMISA 350
           R EEA +  +N+  +      W+ +++A
Sbjct: 480 RLEEAYDFISNMRGVQPTGSVWSILLAA 507



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 138/325 (42%), Gaps = 49/325 (15%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   L  +   F  +  + A+SW  +I G  Q  +F      F  M  +    P
Sbjct: 268 LIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE-NVKP 326

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
             V+F++++  C+     +   Q+H  I++ G++    I +SLVD Y K   + +AR VF
Sbjct: 327 MAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVF 386

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
             + ++D V++ A+I G A  G   +A+ LF  M   G +P    F A L+A    GL D
Sbjct: 387 DRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVD 446

Query: 190 --------------IALGRQVHAFVVKT-----------NFVENV-------FVANALLD 217
                         IA G + +A V              +F+ N+        V + LL 
Sbjct: 447 EGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLA 506

Query: 218 LYSKHDCVVEARKLFGEMPEVDG---VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
               H  V  A K+  ++  VD     +Y +M   Y+  +++K++ +L   +   +    
Sbjct: 507 ACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARL--RIHMRKKGLK 564

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHT 299
           + P  +          +++G Q+HT
Sbjct: 565 KTPACSW---------IEVGNQVHT 580



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K GN+  AR +F+ +  R  V+WT +I G +      +A  LF +
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  D G  P YV F  +L+ CS     +E
Sbjct: 420 MLED-GVRPCYVAFMAVLTACSHAGLVDE 447


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/727 (35%), Positives = 407/727 (55%), Gaps = 47/727 (6%)

Query: 69  SDPDYVT--FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           ++PD     +A++L  C +        QVHA ++  G +    + + L++ YC+  C++ 
Sbjct: 4   TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 63

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F +M +++  S+ A++  +   G  EE IKLF  M + G +P  F F     A   
Sbjct: 64  ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 123

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L +  +G+ V+ +++   F  N  V  ++LD++ K   +  AR+ F E+   D   +N+M
Sbjct: 124 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 183

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI-VTT 305
           ++ Y    ++K++L +FR++       +    ++ +S   N   L+ GR+IH   I V  
Sbjct: 184 VSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 243

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKE---------------------------------- 331
             S++ V NSLVD YAKC   E A+                                   
Sbjct: 244 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEF 303

Query: 332 ---------IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
                    +F+ LS    V W ++ISA  Q G    AL+L  EM  +N+  +  T  S 
Sbjct: 304 FQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 363

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L A ++LA+L  GK++H F+IR G  +  F  ++L+DMY + GS++ + + F  MP+R++
Sbjct: 364 LPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL 423

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSWN +IS    +G     +  F+     G +P+ ++  ++LSACSH GLIEEG +YF  
Sbjct: 424 VSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM 483

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           M  +Y + P  E YA MVD+L R+G F+E  + + +MPFEP+  +W S++ +CRIH N +
Sbjct: 484 MKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPD 543

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
            A+ AA  LF++E  + +  YV M+NIY+ AG+WE  ++++  M+ERGV K    SW+E+
Sbjct: 544 LAEYAARYLFELEP-QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 602

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
           K K+H F   D  HP   +I  K+E+L  ++K+ GY PDT+  L D DE+ K  SL  HS
Sbjct: 603 KRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHS 662

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E++A+AF LI+T  G+P+ ++KNLR C DCH+A K ISK+  R+I +RD+ RFHHF DG 
Sbjct: 663 EKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGV 722

Query: 743 CSCRDFW 749
           CSC D+W
Sbjct: 723 CSCGDYW 729



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 226/488 (46%), Gaps = 49/488 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y ++G +  AR +F+ M +R   SWT ++  Y     + E  KLF  M  + G  P
Sbjct: 51  LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM-VNEGVRP 109

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+  F  +   CSE         V+  ++  G+     +  S++D + K   +D+ARR F
Sbjct: 110 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 169

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +E+  KD   +N +++G+  +G  ++A+ +F +M   G KP+  T A+A+SA   L+ + 
Sbjct: 170 EEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLR 229

Query: 192 LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM---- 246
            GR++H + +K   ++ ++ V N+L+D Y+K   V  AR+ FG + + D VS+N M    
Sbjct: 230 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVT 289

Query: 247 -------------------ITC-----------YAWNE---------QYKESLKLFRELQ 267
                              I C             WN          +   +L L RE+ 
Sbjct: 290 GFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRF 326
            +  + +     + L   +    L+ G++IH Q I+   +     + NSL+DMY +CG  
Sbjct: 350 LSNVEVNTVTMVSALPACSKLAALRQGKEIH-QFIIRCGLDTCNFILNSLIDMYGRCGSI 408

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           ++++ IF  +     V W  MIS Y   G   +A+NLF +     +  +  TF ++L A 
Sbjct: 409 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 468

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVS 444
           +    +  G +    +     M       A ++D+ +++G   + ++  ++MP E N   
Sbjct: 469 SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAV 528

Query: 445 WNALISAC 452
           W +L+ AC
Sbjct: 529 WGSLLGAC 536



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 215/487 (44%), Gaps = 89/487 (18%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+     ++  ++K G +  AR  F  +  +    W I++ GY+ K +F++A  +F  M 
Sbjct: 145 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMV 204

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNSILIICNSLVDSYCKIRC 123
            + G  P+ +T A+ +S C+         ++H   IK    +S L++ NSLVD Y K R 
Sbjct: 205 LE-GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 263

Query: 124 LDLARRVFKEMPQKDSVSFNAL--ITGF-------------------------------- 149
           +++ARR F  + Q D VS+NA+  +TGF                                
Sbjct: 264 VEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVV 323

Query: 150 ---------AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
                    A+ G +  A+ L  EM     + +  T  +AL A   LA +  G+++H F+
Sbjct: 324 VWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 383

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
           ++       F+ N+L+D+Y +   + ++R++F  MP+ D VS+NVMI+ Y  +    +++
Sbjct: 384 IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAV 443

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSL 316
            LF++ +      +   F+ LLS  ++   ++ G    + + T+  +  A+ +      +
Sbjct: 444 NLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYA---CM 500

Query: 317 VDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           VD+ ++ G+F E  E    +    +   W +++ A                 CR + + D
Sbjct: 501 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA-----------------CRIHCNPD 543

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
            A +A+  R   EL   S G  +         M+N+         Y+ +G  +DA +   
Sbjct: 544 LAEYAA--RYLFELEPQSSGNYV--------LMANI---------YSAAGRWEDAAKIRC 584

Query: 436 EMPERNI 442
            M ER +
Sbjct: 585 LMKERGV 591


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/704 (36%), Positives = 393/704 (55%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NSL+  Y K   L  A  VF EMP +D+VS+  +I G  + G   +A+K F++M   GF 
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           PS FT    LS+   +    +GR+VH FVVK      V VAN++L +Y K      AR +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404

Query: 232 FGEMPEVDGVSYNVMITCY----------------------AWNE---QYKE------SL 260
           F  M      S+NVM++ Y                      +WN     Y +      +L
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMAL 464

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           K F R L  +  +   F  +++LS  AN   L++G+Q+H+  + T      ++ N+L+  
Sbjct: 465 KFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIST 524

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                 +A+EIF  +++   + WTA
Sbjct: 525 YAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTA 584

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G  +EA+ LF  M       +  T A++L A A LA L  GKQ+H   IRS 
Sbjct: 585 MIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSF 465
              +V   +A++ +YA+SGS+  A + F ++  R   ++W ++I A AQ+G  +  +  F
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E+MV+ G +PD ++ + VLSAC+H G +++G +Y+  M  ++ + P+  HYA MVD+  R
Sbjct: 705 EEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHAR 764

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA + + +MP  PD ++W S++ +CR+ KN + A+ AA +L  ++   ++  Y A
Sbjct: 765 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDP-HNSGAYSA 823

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  G+W   +++ K  +++GV+K T +SW  ++ KVHVF A+D LHPQ + I RK
Sbjct: 824 LANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRK 883

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
              + +E+KK G+ PD +  LHD D+E+K E L  HSE+LAIAF LI+TPE + + +MKN
Sbjct: 884 AAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKN 943

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH AIK ISK   REI VRD++RFHHF+DG+CSC+D+W
Sbjct: 944 LRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 268/584 (45%), Gaps = 89/584 (15%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N  + N L+S Y KSG L  A  +F  M DR AVSWTI+I G ++  +F +A K F+DM
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            ++G + P   T   +LS C+  +      +VH  ++K G +S + + NS++  Y K   
Sbjct: 339 VSEGFA-PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397

Query: 124 LDLARRVFKEMP-------------------------------QKDSVSFNALITGFAKE 152
            + AR VF+ M                                ++  VS+N +I G+ + 
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457

Query: 153 GLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           GL+  A+K F  M      +P  FT  + LSA   L  + +G+Q+H+++++T    +  +
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517

Query: 212 ANALLDLYSKHDCV---------------------------------VEARKLFGEMPEV 238
            NAL+  Y+K   V                                  +AR++F  M   
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +++  MI  Y  N Q  E+++LFR +     + +    + +LS  A+   L  G+QIH
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            + I +     V V+N+++ +YA+ G    A+ +F  +     T+ WT+MI A  Q G  
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSA 416
           E+A+ LF EM R  +  D  T+  +L A A    +  GK+ +  +    G +  +   + 
Sbjct: 698 EQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC 757

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC--AQNGD----AQATLKSFEDMV 469
           ++D++A++G L +A +  + MP   + V W +L++AC   +N D    A   L S +   
Sbjct: 758 MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHN 817

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
              Y     +L +V SAC            +N   + +KLR  K
Sbjct: 818 SGAYS----ALANVYSACGR----------WNDAARIWKLRKDK 847



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 217/478 (45%), Gaps = 72/478 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N+++S Y   G +  A  +F +MV+R+ VSW  +I GY+Q      A K F
Sbjct: 408 MQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFF 467

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M +    +PD  T  ++LS C+         Q+H+ I++ G      I N+L+ +Y K
Sbjct: 468 SRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAK 527

Query: 121 IRCLDLARR---------------------------------VFKEMPQKDSVSFNALIT 147
              ++ ARR                                 +F  M  +D +++ A+I 
Sbjct: 528 SGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIV 587

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G N+EA++LF  M  +G +P+  T AA LSA   LA +  G+Q+H   +++   +
Sbjct: 588 GYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQ 647

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           +V V+NA++ +Y++   V  AR++F ++    + +++  MI   A +   ++++ LF E+
Sbjct: 648 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGR 325
                      +  +LS  A+   +  G++ + Q      I  ++     +VD++A+ G 
Sbjct: 708 VRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGL 767

Query: 326 FEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             EA E    +     TV W ++++A                 CR             +R
Sbjct: 768 LTEAHEFIQRMPVAPDTVVWGSLLAA-----------------CR-------------VR 797

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
            +A+LA L+ GK L      SG      + SAL ++Y+  G   DA + +K   ++ +
Sbjct: 798 KNADLAELAAGKLLSIDPHNSG------AYSALANVYSACGRWNDAARIWKLRKDKGV 849



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 169/399 (42%), Gaps = 75/399 (18%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM------------------ 319
           ++ LL +    ++   GR IH   +    +    + N+L+                    
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 320 -------------------YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                              YAK GR  +A  +FA +     V WT MI    + G   +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +  F++M     +  Q T  ++L + A + +  +G+++H FV++ G  S V   +++L M
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391

Query: 421 YAK-------------------------------SGSLKDAIQTFKEMPERNIVSWNALI 449
           Y K                                G ++ A+  F+ M ER+IVSWN +I
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451

Query: 450 SACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           +   QNG     LK F  M+  S  +PD+ ++ SVLSAC++  +++ G Q  +S   +  
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQ-MHSYILRTG 510

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQ-MPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
           +    +   +++    +SG  + A ++M Q +  + + I +++++     +  L   K+ 
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEG---YVKLGDTKQ- 566

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           A ++F +   RD   + AM   Y   GQ +   ++ ++M
Sbjct: 567 AREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSM 605


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/657 (37%), Positives = 371/657 (56%), Gaps = 2/657 (0%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q H  +++ G +    + N L+ S         A  VF + P  +   +N LI G     
Sbjct: 21  QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVA 212
              +A+ ++  M+  GF P +FTF   L A   L     +G  +H+ V+KT F  +VFV 
Sbjct: 81  AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
             L+ LYSK+  + +ARK+F E+PE + VS+  +I  Y  +  + E+L LFR L      
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
              F    +L   +   DL  GR I      + ++  V VA SLVDMYAKCG  EEA+ +
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +     V W+A+I  Y   G  +EAL++F EM R N+  D      +  A + L +L
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 320

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG      +    F+SN   G+AL+D YAK GS+  A + FK M  ++ V +NA+IS  
Sbjct: 321 ELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGL 380

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A  G   A    F  MV+ G QPD  + + +L  C+H GL+++G +YF+ M+  + + P 
Sbjct: 381 AMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPT 440

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY  MVD+  R+G   EA+ L+  MP E + I+W +++  CR+HK+ + A+    QL 
Sbjct: 441 IEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLI 500

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           ++E   ++  YV +SNIY+ + +W+   +++ ++ ++G++K+   SWVE+   VH F   
Sbjct: 501 ELEPW-NSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVG 559

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HP +++I  K+E+L +++++ GY P T   L D +EE K   L  HSE+LA+AFALI
Sbjct: 560 DTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALI 619

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +T     I V+KNLR C DCH AIKL+SK+TGREI VRD++RFHHF +G CSCRD+W
Sbjct: 620 STGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/497 (28%), Positives = 237/497 (47%), Gaps = 17/497 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+T   N+L+   +       A  +F          +  LI G    + FR+A  ++  
Sbjct: 32  HQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYAS 91

Query: 63  MRTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           MR  G + PD  TF  +L  C+  P   +  + +H+ +IK G++  + +   LV  Y K 
Sbjct: 92  MRQHGFA-PDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKN 150

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  AR+VF E+P+K+ VS+ A+I G+ + G   EA+ LF  +  +G +P  FT    L
Sbjct: 151 GFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRIL 210

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   + D+A GR +  ++ ++  V NVFVA +L+D+Y+K   + EAR++F  M E D V
Sbjct: 211 YACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVV 270

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            ++ +I  YA N   KE+L +F E+Q        +    + S  +    L++G       
Sbjct: 271 CWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLM 330

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                +S   +  +L+D YAKCG   +AKE+F  +     V + A+IS     G++  A 
Sbjct: 331 DGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAF 390

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS------ 415
            +F +M +  +  D  TF  +L        +  G +  S       MS+VFS +      
Sbjct: 391 GVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFS------GMSSVFSVTPTIEHY 444

Query: 416 -ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SG 472
             ++D+ A++G L +A    + MP E N + W AL+  C  + D Q      + +++   
Sbjct: 445 GCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEP 504

Query: 473 YQPDSVSLLSVLSACSH 489
           +      LLS + + SH
Sbjct: 505 WNSGHYVLLSNIYSASH 521



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 50/307 (16%)

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           L SL   KQ H  ++R G   + +  + LL       + + A   F + P  NI  +N L
Sbjct: 13  LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------HCGL------IEEG 496
           I     N   +  +  +  M Q G+ PD+ +   VL AC+      H GL      I+ G
Sbjct: 73  IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 497 LQY----------------FNSMTQKYKLRPKKEHYASMVDILC---RSGCFDEAEKL-- 535
             +                F +  +K      +++  S   I+C    SGCF EA  L  
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192

Query: 536 -MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +M   PD      ++ +C    +L   +     + +   + +     ++ ++YA  G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
             E   +V   M E+ V       W  L                +N + ++  ++  EM+
Sbjct: 253 SMEEARRVFDGMVEKDV-----VCWSALIQGY-----------ASNGMPKEALDVFFEMQ 296

Query: 655 KEGYKPD 661
           +E  +PD
Sbjct: 297 RENVRPD 303


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/759 (35%), Positives = 419/759 (55%), Gaps = 23/759 (3%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  +    N L++ Y + G    AR L + M  R AVS+ +LI  YS++     + +   
Sbjct: 39  PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
             R   G D D  ++A  L+ CS          VHA  I  G +S + + NSLV  Y K 
Sbjct: 99  RARR-AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKC 157

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +  ARRVF    ++D VS+N+L++G+ + G  EE +++F  M+  G   + F   + +
Sbjct: 158 GEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI 217

Query: 182 S--AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
              +G G   + +   VH  V+K     +VF+ +A++D+Y+K   +VEA  LF  + E +
Sbjct: 218 KCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277

Query: 240 GVSYNVMITCYAWNEQY------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            V +N MI  +   E         E+L L+ E+Q      ++F FS++L        L+ 
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           G+QIH Q I  T   +  + ++L+D+Y   G  E+    F +      V WTAM+S  VQ
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               E+AL+LF E   A +  D  T +S++ A A LA    G+Q+  F  +SGF      
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G++ + MYA+SG +  A + F+EM   ++VSW+A+IS  AQ+G A+  L  F++MV +  
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ ++ L VL+ACSH GL++EGL+Y+ +M + Y L P  +H   +VD+L R+G   +AE
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
             ++   F  D ++W S++ SCRIH++LE  +  A+++ ++E    +A YV + N+Y  A
Sbjct: 578 AFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT-SSASYVILYNMYLDA 636

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+    S+ +  M++RGV+K    SW+ELK  VH F A D+ HP+++ I  K+E ++  +
Sbjct: 637 GELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRI 696

Query: 654 KKEGYKPDTSCALHDEDEEIKVES---LKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           +K          L   D EI       +  HSE+LA+A  +I+ P+ +PI VMKNLR C 
Sbjct: 697 EK----------LATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCR 746

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH+ +KLISK   REI +RD  RFHHF+DG CSC D+W
Sbjct: 747 DCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/614 (39%), Positives = 381/614 (62%), Gaps = 8/614 (1%)

Query: 140 VSFNALITGFAKEGLNEEAIKLFVE-MQHLGFKPSDFT---FAAALSAGVGLADIALGRQ 195
           V  N  +  F++ G + ++ KL  E + H+   PS+F    +A AL   +   + + G+ 
Sbjct: 2   VCRNNFLIQFSRRGFSVQSAKLTQEFVGHV--SPSEFNSHAYANALQDCIQKDEPSRGKG 59

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  ++K     ++F  N LL++Y K D + +A KLF EMPE + +S+  +I  YA + +
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           + E+++LF  L       +QF F+++L   A    L +G QIH   I     S+V V+N+
Sbjct: 120 FLEAIELFVRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNA 178

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+YAKCGR E + E+FA   H + V W  +I  +VQ G+ E+AL LF+ M    + A 
Sbjct: 179 LMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT 238

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + T++S LRA A LA+L  G Q+HS  +++ F  ++   +AL+DMYAK GS+KDA   F 
Sbjct: 239 EVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFD 298

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            M +++ VSWNA+IS  + +G  +  L+ F+ M ++  +PD ++ + VLSAC++ GL+++
Sbjct: 299 LMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQ 358

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G  YF SM Q + + P  EHY  MV +L R G  D+A KL+ ++PF+P  ++W +++ +C
Sbjct: 359 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 418

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
            IH ++E  + +A ++ +ME  +D A +V +SN+YA A +W++V+ V+K M+ +GV+K  
Sbjct: 419 VIHNDIELGRISAQRVLEMEP-QDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 477

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             SW+E +  VH FT  D  HP+   I   +E L  + KK GY P+ +  L D ++E K 
Sbjct: 478 GLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKE 537

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
             L  HSERLA++F +I TP GSPI +MKNLR C DCHAAIK ISK+  REI VRD +RF
Sbjct: 538 RLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRF 597

Query: 736 HHFKDGFCSCRDFW 749
           HHF++G CSC D+W
Sbjct: 598 HHFQEGLCSCGDYW 611



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 208/386 (53%), Gaps = 3/386 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A  L  C + D  +    +H +I+K G    L   N L++ Y K   L  A ++F EMP
Sbjct: 41  YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++++SF  LI G+A+     EAI+LFV + H    P+ FTFA+ L A   +  + LG Q
Sbjct: 101 ERNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V+K     +VFV+NAL+D+Y+K   +  + +LF E P  + V++N +I  +     
Sbjct: 160 IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGD 219

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            +++L+LF  +   R   ++  +S+ L   A+   L+ G QIH+ T+ TT   ++ V N+
Sbjct: 220 GEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNA 279

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+DMYAKCG  ++A+ +F  ++    V W AMIS Y   G   EAL +F +M    +  D
Sbjct: 280 LIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPD 339

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           + TF  +L A A    L  G+   + +I+  G    +   + ++ +  + G L  A++  
Sbjct: 340 KLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLI 399

Query: 435 KEMP-ERNIVSWNALISACAQNGDAQ 459
            E+P + +++ W AL+ AC  + D +
Sbjct: 400 DEIPFQPSVMVWRALLGACVIHNDIE 425



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 196/351 (55%), Gaps = 4/351 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L++ YVKS  L  A +LF+ M +R  +S+  LI GY++  +F EA +LFV +  +   
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE--V 134

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA++L  C+  +  N   Q+H  +IK G +S + + N+L+D Y K   ++ +  
Sbjct: 135 LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSME 194

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E P ++ V++N +I G  + G  E+A++LF+ M     + ++ T+++AL A   LA 
Sbjct: 195 LFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 254

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G Q+H+  VKT F +++ V NAL+D+Y+K   + +AR +F  M + D VS+N MI+ 
Sbjct: 255 LEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISG 314

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y+ +   +E+L++F ++Q T     +  F  +LS  AN   L  G+   T  I    I  
Sbjct: 315 YSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP 374

Query: 310 -VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            ++    +V +  + G  ++A ++   +    S + W A++ A V   ++E
Sbjct: 375 CIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE 425



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 47/334 (14%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K G +  + ELF     R  V+W  +I G+ Q     +A +LF++M  +  
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM-LEYR 234

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
                VT+++ L  C+        +Q+H+  +K  ++  +++ N+L+D Y K   +  AR
Sbjct: 235 VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDAR 294

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF  M ++D VS+NA+I+G++  GL  EA+++F +MQ    KP   TF   LSA     
Sbjct: 295 LVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSA----- 349

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNV-M 246
                                  ANA LLD         + +  F  M +  G+   +  
Sbjct: 350 ----------------------CANAGLLD---------QGQAYFTSMIQDHGIEPCIEH 378

Query: 247 ITCYAW----NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            TC  W         +++KL  E+    F  S   +  LL       D+++GR I  Q +
Sbjct: 379 YTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGACVIHNDIELGR-ISAQRV 434

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           +     +      L +MYA   R++    +  N+
Sbjct: 435 LEMEPQDKATHVLLSNMYATAKRWDNVASVRKNM 468



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 44/197 (22%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ V TN LI  Y K G++  AR +F+ M  +  VSW  +I GYS     REA ++F D
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIF-D 329

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
              +    PD +TF  +LS C+                                      
Sbjct: 330 KMQETEVKPDKLTFVGVLSACANAGL---------------------------------- 355

Query: 123 CLDLARRVFKEMPQKDSVS-----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
            LD  +  F  M Q   +      +  ++    + G  ++A+KL  E+    F+PS   +
Sbjct: 356 -LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVW 411

Query: 178 AAALSAGVGLADIALGR 194
            A L A V   DI LGR
Sbjct: 412 RALLGACVIHNDIELGR 428


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/774 (35%), Positives = 425/774 (54%), Gaps = 43/774 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +    ++F+ + DR  VSW   I    +  ++ +A + F  M+ +   
Sbjct: 132 NTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME 191

Query: 70  DPDYVTFATLLSGCSEPDTANEL---IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
              + T  ++   CS     + L    Q+H   ++ G +      N+L+  Y K+  +D 
Sbjct: 192 LSSF-TLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDD 249

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ++ +F+    +D VS+N +I+ F++     EA+  F  M   G +    T A+ L A   
Sbjct: 250 SKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 309

Query: 187 LADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           L  + +G+++HA+V++ N  +EN FV +AL+D+Y     V   R++F  +       +N 
Sbjct: 310 LERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNA 369

Query: 246 MITCYAWNEQYKESLKLFRE-------LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           MI+ YA N   +++L LF E       L  T    S  P        +NK        IH
Sbjct: 370 MISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNK------ESIH 423

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +      +  V N+L+DMY++ G+ + ++ IF ++     V W  MI+ YV  G   
Sbjct: 424 GYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYS 483

Query: 359 EALNLFIEMCR-----------------ANISADQATFASILRASAELASLSLGKQLHSF 401
            AL L  EM R                      +  T  ++L   A LA+++ GK++H++
Sbjct: 484 NALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAY 543

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            IR+   S++  GSAL+DMYAK G L  + + F EMP +N+++WN LI AC  +G  +  
Sbjct: 544 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEA 603

Query: 462 LKSFEDMV-QSGY----QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
           L+ F++MV ++G     +P+ V+ ++V +ACSH GLI EGL  F  M   + + P  +HY
Sbjct: 604 LELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHY 663

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKME 575
           A +VD+L R+G  +EA +L+  MP E D++  WSS++ +CRIH+N+E  + AA  L  +E
Sbjct: 664 ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLE 723

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
               A+ YV +SNIY+ AG W    +V+K MR+ GV+K    SW+E + +VH F A D  
Sbjct: 724 P-NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVS 782

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HPQ+ ++   +E L ++M+KEGY PDTSC LH+ DE+ K   L  HSE+LAIAF ++NTP
Sbjct: 783 HPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTP 842

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G+ I V KNLR C DCHAA K ISKI  REI VRD  RFHHFK+G CSC D+W
Sbjct: 843 PGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 276/562 (49%), Gaps = 31/562 (5%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R+  SW   +   ++ N FREA   +++M T  G+ PD   F  +L   S         Q
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEM-TVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 95  VHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +HA  +KFGY +S + + N+LV+ Y K   +    +VF  +  +D VS+N+ I    +  
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---DIALGRQVHAFVVKTNFVENVF 210
             E+A++ F  MQ    + S FT  +   A   L     + LG+Q+H + ++    +  F
Sbjct: 174 KWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTF 232

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
             NAL+ +Y+K   V +++ LF    + D VS+N MI+ ++ ++++ E+L  FR +    
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 292

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEA 329
            +      +++L   ++   L +G++IH   +    + E   V ++LVDMY  C + E  
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAE 388
           + +F ++       W AMIS Y + G  E+AL LFIEM + A +  +  T AS++ A   
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             + S  + +H + ++ GF  + +  +AL+DMY++ G +  +   F  M  R+ VSWN +
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTM 472

Query: 449 ISACAQNGDAQATLKSFEDMVQ-----------------SGYQPDSVSLLSVLSACSHCG 491
           I+    +G     L    +M +                   Y+P++++L++VL  C+   
Sbjct: 473 ITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALA 532

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            I +G +  ++   +  L       +++VD+  + GC + + ++  +MP   + I W+ +
Sbjct: 533 AIAKGKE-IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVL 590

Query: 552 INSCRIHKNLEFAKKAADQLFK 573
           I +C +H   E     A +LFK
Sbjct: 591 IMACGMHGKGE----EALELFK 608



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 274/566 (48%), Gaps = 46/566 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q T + N L++ Y K G +  ++ LF S VDR  VSW  +I  +SQ ++F EA   F  
Sbjct: 228 DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 287

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILI----ICNSLVDSY 118
           M  + G + D VT A++L  CS  +  +   ++HA +++   N+ LI    + ++LVD Y
Sbjct: 288 MVLE-GVELDGVTIASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMY 343

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTF 177
           C  R ++  RRVF  +  +    +NA+I+G+A+ GL+E+A+ LF+EM  + G  P+  T 
Sbjct: 344 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 403

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ + A V     +    +H + VK  F E+ +V NAL+D+YS+   +  +  +F  M  
Sbjct: 404 ASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEV 463

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-----------------FDRSQFPFST 280
            D VS+N MIT Y  + +Y  +L L  E+Q                    +  +     T
Sbjct: 464 RDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMT 523

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A    +  G++IH   I     S++ V ++LVDMYAKCG    ++ +F  + + +
Sbjct: 524 VLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 583

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCR-----ANISADQATFASILRASAELASLSLG 395
            + W  +I A    G  EEAL LF  M            ++ TF ++  A +    +S G
Sbjct: 584 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 643

Query: 396 KQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER--NIVSWNALISAC 452
             L +      G        + ++D+  ++G L++A +    MP     + +W++L+ AC
Sbjct: 644 LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 703

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRP 511
             + + +    + ++++    +P+  S   +LS   S  GL  + ++   +M Q   +  
Sbjct: 704 RIHQNVELGEVAAKNLLH--LEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQ---MGV 758

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMA 537
           KKE   S ++        DE  K MA
Sbjct: 759 KKEPGCSWIEFR------DEVHKFMA 778



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 220/428 (51%), Gaps = 17/428 (3%)

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P + + S+   +    +     EAI  ++EM   G +P +F F A L A  GL D+  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 195 QVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           Q+HA  VK  +   +V VAN L+++Y K   + +  K+F  + + D VS+N  I      
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN---KLDLQIGRQIHTQTIVTTAISEV 310
           E+++++L+ FR +Q    + S F   ++    +N      L++G+Q+H  ++      + 
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSL-RVGDQKT 231

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
              N+L+ MYAK GR +++K +F +      V W  MIS++ Q     EAL  F  M   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMSNVFSGSALLDMYAKSGSLKD 429
            +  D  T AS+L A + L  L +GK++H++V+R+   + N F GSAL+DMY     ++ 
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACS 488
             + F  +  R I  WNA+IS  A+NG  +  L  F +M++ +G  P++ ++ SV+ AC 
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 489 HCGLI--EEGLQYFNSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPD 544
           HC     +E +  +       KL  K++ Y   +++D+  R G  D +E +   M    D
Sbjct: 412 HCEAFSNKESIHGY-----AVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-D 465

Query: 545 EIMWSSVI 552
            + W+++I
Sbjct: 466 RVSWNTMI 473



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 18/185 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA---------VSWTILIGGYSQKN 51
           MPN+N ++ N+LI      G    A ELF +MV             V++  +    S   
Sbjct: 579 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 638

Query: 52  QFREAFKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELIQ-VHADIIKFG-YNS 106
              E   LF  M+ D G +P    Y     LL    + + A EL+  + A+  K G ++S
Sbjct: 639 LISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 698

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
           +L  C      +  +   ++A +    +    +  +  L   ++  GL  +A+++   M+
Sbjct: 699 LLGACR----IHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 754

Query: 167 HLGFK 171
            +G K
Sbjct: 755 QMGVK 759


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/647 (39%), Positives = 391/647 (60%), Gaps = 12/647 (1%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N +V +Y K   + +AR++F E PQ D+VS+N LI+G+A       A+ LF  M+ LGF+
Sbjct: 78  NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
              FT +  ++A     D+   +Q+H F V   F     V NA +  YSK   + EA  +
Sbjct: 138 VDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195

Query: 232 FGEMPEV-DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           F  M  + D VS+N MI  Y  +++  ++L L++E+ F  F    F  +++L+ + +   
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR---FEEAKEIFANLSHISTVPWTAM 347
           L  GRQ H + I         V + L+D Y+KCG      +++++F  +     V W  M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTM 315

Query: 348 ISAY-VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           IS Y + + + EEA+  F +M R     D  +F  +  A + L+S S GKQ+H   I+S 
Sbjct: 316 ISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSN 375

Query: 407 FMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
             SN  S  +AL+ +Y KSG+L DA + F  MPE N VS+N +I   AQ+G     L+ +
Sbjct: 376 IPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLY 435

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           + M+ SG  P++++ +++LSAC+HCG ++EG +YFN+M + +K+ P+ EHY+ M+D+L R
Sbjct: 436 QRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGR 495

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  +EAE+ +  MP++P  + W++++ +CR HKN+  A++AA +L  M+ L  A PYV 
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLA-ATPYVM 554

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+YA AG+WE ++ V+K+MR + +RK    SW+E+K K HVF A D  HP   E+   
Sbjct: 555 LANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVES---LKYHSERLAIAFALINTPEGSPILV 702
           +E +M++MKK GY  D   A+  EDE  + E    L +HSE+LA+AF L++T +G  I+V
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVV 674

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C DCH AIK +S + GREI VRD+ RFH FKDG CSC D+W
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 231/460 (50%), Gaps = 13/460 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N+++  Y K   +  AR+LF+       VS+  LI GY+   +   A  LF  MR
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G + D  T + L++ C   D  + + Q+H   +  G++S   + N+ V  Y K   L
Sbjct: 133 -ELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189

Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             A  VF  M   +D VS+N++I  + +     +A+ L+ EM   GFK   FT A+ L+A
Sbjct: 190 REAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDG 240
              L  +  GRQ H  ++K  F +N  V + L+D YSK    D + ++ K+F E+   D 
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309

Query: 241 VSYNVMITCYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           V +N MI+ Y+ NE++ +E++K FR++Q          F  + S  +N      G+QIH 
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             I +   S  + V N+L+ +Y K G   +A+ +F  +  ++ V +  MI  Y Q G+  
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
           EAL L+  M  + I+ +  TF +IL A A    +  G++  +  ++  F         S 
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFN-TMKETFKIEPEAEHYSC 488

Query: 417 LLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
           ++D+  ++G L++A +    MP +   V+W AL+ AC ++
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 38/401 (9%)

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR------ 229
           +F   L   V   D+  G+ +HA  VK+    + +++N  ++LYSK  C+  AR      
Sbjct: 10  SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69

Query: 230 -------------------------KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
                                    +LF E P+ D VSYN +I+ YA   +   ++ LF+
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            ++   F+   F  S L++   +++DL   +Q+H   +     S   V N+ V  Y+K G
Sbjct: 130 RMRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 325 RFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              EA  +F  +  +   V W +MI AY Q     +AL L+ EM       D  T AS+L
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG---SLKDAIQTFKEMPER 440
            A   L  L  G+Q H  +I++GF  N   GS L+D Y+K G    + D+ + F+E+   
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307

Query: 441 NIVSWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++V WN +IS  + N + ++  +KSF  M + G++PD  S + V SACS+     +G Q 
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
                +      +     +++ +  +SG   +A ++  +MP
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP 408



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 10/179 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+      N LIS Y KSGNL  AR +F+ M +  AVS+  +I GY+Q     EA +L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLY 435

Query: 61  VDMRTDGGSDPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M  D G  P+ +TF  +LS C+   + D   +      +  K    +    C  ++D 
Sbjct: 436 QRM-LDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSC--MIDL 492

Query: 118 YCKIRCLDLARRVFKEMPQK-DSVSFNALITGFAKE---GLNEEAIKLFVEMQHLGFKP 172
             +   L+ A R    MP K  SV++ AL+    K     L E A K  + MQ L   P
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATP 551


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/684 (36%), Positives = 400/684 (58%), Gaps = 3/684 (0%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   + +TF  +L+   +PD   +   +H+ + +  ++  + +  +LV++Y K   L  A
Sbjct: 5   GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  MP +   ++N++I+ ++    + EA  +F  MQH G +    TF + L A V  
Sbjct: 65  RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++  G+ V   + +T+F  ++FV  AL+ +Y++      A ++FG M + + ++++ +I
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T +A +    E+L+ FR +Q      ++  F +LL+       L+   +IH         
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 308 SEVKVANSLVDMYAKC--GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
               ++N+LV++Y +C  G  + A+ I   +       W  +I+ Y   G   EAL  + 
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            +    I  D+ TF S+L A     SL+ GK +HS  +  G  S+V   +AL +MY+K G
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG 364

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S+++A + F  MP R+ VSWN ++ A AQ+G+++  LK    M Q G + + ++ +SVLS
Sbjct: 365 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 424

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +CSH GLI EG QYF+S+     +  K EHY  +VD+L R+G   EAEK +++MP EP+ 
Sbjct: 425 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEI 484

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           + W+S++ +CR+HK+L+  K AA +L +++    +A  V +SNIY+  G W++ +++++A
Sbjct: 485 VTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSAS-VVLSNIYSERGDWKNAAKLRRA 543

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M  R V+KV   S +++K+KVH F   D  HP+  EI  K+E L   M++ GY PDT   
Sbjct: 544 MASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 603

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD DEE K   L YHSE+LAIAF LI+TPE S + + KNLR C DCH A K ISKITGR
Sbjct: 604 LHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGR 663

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD+ RFHHF+DG CSC+D+W
Sbjct: 664 EIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 227/450 (50%), Gaps = 5/450 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G+L  AR++F+ M  R+  +W  +I  YS   +  EAF +F  M+ + G   
Sbjct: 51  LVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHE-GERC 109

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VTF ++L  C  P+       V   I +  +   L +  +L+  Y + R  + A +VF
Sbjct: 110 DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVF 169

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M QK+ ++++A+IT FA  G   EA++ F  MQ  G  P+  TF + L+     + + 
Sbjct: 170 GRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 229

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDC--VVEARKLFGEMPEVDGVSYNVMITC 249
              ++H  + +    +   ++NAL+++Y + +   +  A  +  EM E    ++NV+I  
Sbjct: 230 ELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLING 289

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + + +E+L+ ++ LQ       +  F ++L+   +   L  G+ IH+  +     S+
Sbjct: 290 YTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 349

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N+L +MY+KCG  E A+ IF ++   S V W  M+ AY Q G  EE L L  +M +
Sbjct: 350 VIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ 409

Query: 370 ANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +  TF S+L + +    ++ G Q  HS     G          L+D+  ++G L+
Sbjct: 410 EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQ 469

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +A +   +MP E  IV+W +L+ AC  + D
Sbjct: 470 EAEKYISKMPSEPEIVTWASLLGACRVHKD 499



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 6/256 (2%)

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           + +E  +AN+     TF ++L +  +  +L  GK +HS V  S    +VF  +AL++ Y 
Sbjct: 1   MLLEGVKANV----ITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 56

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GSL DA + F  MP R++ +WN++ISA + +  +      F+ M   G + D V+ LS
Sbjct: 57  KCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLS 116

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L AC +   ++ G     S+++            +++ +  R    + A ++  +M  +
Sbjct: 117 ILDACVNPENLQHGKHVRESISET-SFELDLFVGTALITMYARCRSPENAAQVFGRMK-Q 174

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            + I WS++I +   H +   A +    + +   L +   ++++ N +      E +S++
Sbjct: 175 KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI 234

Query: 603 KKAMRERGVRKVTAYS 618
              + E G+   T  S
Sbjct: 235 HLLITEHGLDDTTTMS 250



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + +  N L + Y K G++  AR +F+SM  R+AVSW  ++  Y+Q  +  E  KL   
Sbjct: 347 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 406

Query: 63  MRTDGGSDPDYVTFATLLSGCS 84
           M  + G   + +TF ++LS CS
Sbjct: 407 MEQE-GVKLNGITFVSVLSSCS 427


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/681 (38%), Positives = 382/681 (56%), Gaps = 49/681 (7%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG------------LNEEAI 159
           N+L+ +    R L    R+F  MPQ+D+VS+NALI GF+  G            L EEA+
Sbjct: 80  NALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAV 139

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
                +     +PS  T +  + A   L D ALGRQVH  +++  F    F  + L+D+Y
Sbjct: 140 -----VDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMIT----------------------CYAW----- 252
           +K   + +A+++F EM   + V YN MIT                         W     
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254

Query: 253 ----NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N    E+L +FR ++       Q+ F ++L+        + G+QIH  TI T    
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V ++LVDMY+KC     A+ +F  ++  + + WTAMI  Y Q G  EEA+ +F EM 
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 374

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              I  +  T  S++ + A LASL  G Q H   + SG    +   SAL+ +Y K GS++
Sbjct: 375 TDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F EMP  + VS+ AL+S  AQ G A+ T+  FE M+  G +P+ V+ + VLSACS
Sbjct: 435 DAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACS 494

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
             GL+E+G  YF+SM Q + +    +HY  M+D+  RSG   EAE+ + QMP  PD I W
Sbjct: 495 RSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGW 554

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           ++++++CR+  ++E  K AA+ L K +  ++ A YV + +++A  G+W  V+ +++ MR+
Sbjct: 555 ATLLSACRLRGDMEIGKWAAENLLKTDP-QNPASYVLLCSMHASKGEWSEVALLRRGMRD 613

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           R V+K    SW++ K++VH+F+A+D+ HP +  I  K++ L  +M +EGYKPD S  LHD
Sbjct: 614 RQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHD 673

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
             +  KV  L  HSE+LAIAF LI  PE  PI V+KNLR C DCH A K ISKITGR+I 
Sbjct: 674 VADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDIL 733

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD+ RFH F +G CSC DFW
Sbjct: 734 VRDAVRFHKFSNGICSCGDFW 754



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 256/542 (47%), Gaps = 44/542 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFK-- 58
           MP+ N  + N L+S    +  L     LF SM  R AVS+  LI G+S       A    
Sbjct: 71  MPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAY 130

Query: 59  ---LFVDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
              L  +   DG    P  +T + ++   S         QVH  I++ G+ +     + L
Sbjct: 131 RALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPL 190

Query: 115 VDSYCK-----------------------------IRC--LDLARRVFKEMPQKDSVSFN 143
           VD Y K                             +RC  ++ AR VF+ M  +DS+++ 
Sbjct: 191 VDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWT 250

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
            ++TG  + GL  EA+ +F  M+  G     +TF + L+A   LA    G+Q+HA+ ++T
Sbjct: 251 TMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT 310

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            +  N+FV +AL+D+YSK   +  A  +F  M   + +S+  MI  Y  N   +E++++F
Sbjct: 311 LYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVF 370

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
            E+Q      + F   +++S  AN   L+ G Q H   +V+     + V+++LV +Y KC
Sbjct: 371 SEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKC 430

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G  E+A  +F  +     V +TA++S Y Q G  +E ++LF +M    +  +  TF  +L
Sbjct: 431 GSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVL 490

Query: 384 RASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RN 441
            A +    +  G    HS     G +      + ++D+Y++SG LK+A +  ++MP   +
Sbjct: 491 SACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPD 550

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSAC----SHCGLIEEG 496
            + W  L+SAC   GD +    + E+++++  Q P S  LL  + A     S   L+  G
Sbjct: 551 AIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRG 610

Query: 497 LQ 498
           ++
Sbjct: 611 MR 612


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/687 (35%), Positives = 403/687 (58%), Gaps = 15/687 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C E  +      VH  + K G ++ + +  SLV++Y +      ARR+F  MP
Sbjct: 81  YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ V++ AL+TG+         +++FVEM  +G  PS +T  A L+A +   D+ LG+Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH + +K        + N+L  LY+K   +  A + F  +PE + +++  MI+  A +E+
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260

Query: 256 YKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             E  + LF ++       ++F  ++++S+   +LDL +G+Q+   +      + + V N
Sbjct: 261 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNL 363
           S + +Y + G  +EA  +F  +   S + W AMIS Y Q     K +L+      +AL +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F ++ R+ +  D  TF+SIL   + + +L  G+Q+H+  I+SGF+S+V   SAL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++DA + F EMP R  V+W ++IS  +Q+G  Q  ++ FE+M  +G +P+ ++ +S+
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACS+ GL+EE   YF+ M ++Y + P  +HY  M+D+  R G  ++A   + +  FEP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E +WSS++  CR H N+E A  AAD+L ++ K +    Y+ + N+Y    +W+ V++V+
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLEL-KPKGIETYILLLNMYISTERWQDVARVR 619

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M++  V  +   SW+ +K KV+ F AND  HPQ  E+ + +ENL+++ K  GY+P  +
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQN 679

Query: 664 CALHD--EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
             L D  +DE+    SLK+HSERLA+A  L+ TP G+ + V KN+  C DCH++IKL S 
Sbjct: 680 AELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSL 739

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDF 748
           +  REI VRDS R H FKDG CSC DF
Sbjct: 740 LENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 245/473 (51%), Gaps = 15/473 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y++      AR LF+ M +R  V+WT L+ GY+  +Q     ++FV+M  + G  P
Sbjct: 119 LVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM-LEMGRYP 177

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            + T    L+ C      +   QVH   IK+G  SI  + NSL   Y K+  LD A R F
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAF 237

Query: 132 KEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
             +P+K+ +++  +I+  A+ E   E  + LF++M   G  P++FT  + +S      D+
Sbjct: 238 WRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 297

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG+QV AF  K     N+ V N+ + LY +     EA +LF +M +   +++N MI+ Y
Sbjct: 298 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 357

Query: 251 AW-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           A              +  ++L +FR+L+ +      F FS++LSV +  + L+ G QIH 
Sbjct: 358 AQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHA 417

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           QTI +  +S+V V ++LV+MY KCG  ++A + F  +   + V WT+MIS Y Q G  +E
Sbjct: 418 QTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQE 477

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALL 418
           A+ LF EM  A +  ++ TF S+L A +    +   +     + +   +  V      ++
Sbjct: 478 AIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMI 537

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           DM+ + G ++DA    K    E N   W++L++ C  +G+ +    + + +++
Sbjct: 538 DMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE 590



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 183/369 (49%), Gaps = 21/369 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L S Y K G+L +A   F  + ++  ++WT +I   ++  +  E    LF+DM  D G
Sbjct: 218 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMD-G 276

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      N   QV A   K G  + L + NS +  Y +    D A 
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R+F++M     +++NA+I+G+      AK+ L       +A+ +F +++    KP  FTF
Sbjct: 337 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 396

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +K+ F+ +V V +AL+++Y+K  C+ +A K F EMP 
Sbjct: 397 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT 456

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              V++  MI+ Y+ + Q +E+++LF E++      ++  F +LLS  +    ++     
Sbjct: 457 RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHY 516

Query: 298 HTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYV 352
                    I   V     ++DM+ + GR E+A   F+ +      P    W+++++   
Sbjct: 517 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 353 QKGNLEEAL 361
             GN+E A 
Sbjct: 574 SHGNMELAF 582



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           +++EA+ +  E      +   A +  +L    E  SL   + +H  + ++G  +++F  +
Sbjct: 62  DVQEAMTMLTE----GKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVAT 117

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L++ Y +  + +DA + F  MPERN+V+W AL++    N      L+ F +M++ G  P
Sbjct: 118 SLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC----RSGCFDE 531
              +L + L+AC     ++ G Q        Y ++   E   SM + LC    + G  D 
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQ-----VHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 232

Query: 532 AEKLMAQMPFEPDEIMWSSVINSC 555
           A +   ++P E + I W+++I++C
Sbjct: 233 ALRAFWRIP-EKNVITWTTMISAC 255



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G +  A + F  M  RT V+WT +I GYSQ  Q +EA +LF +MR
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 65  TDGGSDPDYVTFATLLSGCS 84
              G  P+ +TF +LLS CS
Sbjct: 487 L-AGVRPNEITFVSLLSACS 505


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/635 (38%), Positives = 380/635 (59%), Gaps = 25/635 (3%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S+++  +I  +A  GL   ++  F  ++  G  P    F + L A        L + +HA
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100

Query: 199 FVVKTNFVENVFVANALLDLYSK--------HDC--------------VVEARKLFGEMP 236
            V++  F  +++ ANAL+++YSK        H+               +   RKLF  MP
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
             D VS+N +I   A N  Y+E+L + +E+         F  S++L +     ++  G++
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH   I      +V + +SL+DMYAKC + E +   F  LS+   + W ++I+  VQ G 
Sbjct: 221 IHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGR 280

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            ++ L  F  M +  +   Q +F+S++ A A L +L+LGKQLH+++IR GF  N F  S+
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340

Query: 417 LLDMYAKSGSLKDAIQTFK--EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           LLDMYAK G++K A   F   EM +R++VSW A+I  CA +G A   +  FE+M+  G +
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK 400

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P  V+ ++VL+ACSH GL++EG +YFNSM + + + P  EHYA++ D+L R+G  +EA  
Sbjct: 401 PCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYD 460

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            ++ M  EP   +WS+++ +CR HKN+E A+K  +++  ++   +   +V MSNIY+ A 
Sbjct: 461 FISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDP-GNMGAHVIMSNIYSAAQ 519

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W   ++++  MR+ G++K  A SW+E+ +KVH F A D+ HP  ++I   +  L+++M+
Sbjct: 520 RWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQME 579

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           KEGY  DT+  LHD DEE K + L+ HSERLAIAF +I+T  G+ I V+KN+R C DCH 
Sbjct: 580 KEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHT 639

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AIK ++KI GREI VRD+SRFHHFK+G CSC D+W
Sbjct: 640 AIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 27/442 (6%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           +++W  +I  Y+     R +   F  +R+ G S PD   F +LL   +     N    +H
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGIS-PDRHLFPSLLRASTLFKHFNLAQSLH 99

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRC----------------------LDLARRVFKEM 134
           A +I+ G++  L   N+L++ Y K                         +D  R++F  M
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P +D VS+N +I G A+ G+ EEA+ +  EM     +P  FT ++ L      A++  G+
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H + ++  F ++VF+ ++L+D+Y+K   V  +   F  +   D +S+N +I     N 
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           ++ + L  FR +   +    Q  FS+++   A+   L +G+Q+H   I         +A+
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS 339

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           SL+DMYAKCG  + A+ IF  +       V WTA+I      G+  +A++LF EM    +
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV 399

Query: 373 SADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
                 F ++L A +    +  G K  +S     G    +   +A+ D+  ++G L++A 
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAY 459

Query: 432 QTFKEMPERNIVS-WNALISAC 452
                M E    S W+ L++AC
Sbjct: 460 DFISNMGEEPTGSVWSTLLAAC 481



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 171/341 (50%), Gaps = 5/341 (1%)

Query: 24  TARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC 83
           + R+LF+ M  R  VSW  +I G +Q   + EA  +  +M  +    PD  T +++L   
Sbjct: 151 SVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKE-NLRPDSFTLSSILPIF 209

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           +E     +  ++H   I+ G++  + I +SL+D Y K   ++L+   F  +  +D++S+N
Sbjct: 210 TEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWN 269

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           ++I G  + G  ++ +  F  M     KP   +F++ + A   L  + LG+Q+HA++++ 
Sbjct: 270 SIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL 329

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKESLK 261
            F +N F+A++LLD+Y+K   +  AR +F   EM + D VS+  +I   A +    +++ 
Sbjct: 330 GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMY 320
           LF E+           F  +L+  ++   +  G +          ++  ++   ++ D+ 
Sbjct: 390 LFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLL 449

Query: 321 AKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            + GR EEA +  +N+    T   W+ +++A     N+E A
Sbjct: 450 GRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELA 490



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 5/182 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +  +   F+ + +R A+SW  +I G  Q  +F +    F  M  +    P
Sbjct: 240 LIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKE-KVKP 298

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
             V+F++++  C+     N   Q+HA II+ G++    I +SL+D Y K   + +AR +F
Sbjct: 299 MQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIF 358

Query: 132 K--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGL 187
              EM  +D VS+ A+I G A  G   +A+ LF EM   G KP    F A L+A    GL
Sbjct: 359 NKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGL 418

Query: 188 AD 189
            D
Sbjct: 419 VD 420



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N    + L+  Y K GN+  AR +FN   M DR  VSWT +I G +      +A  LF
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
            +M  D G  P YV F  +L+ CS     +E
Sbjct: 392 EEMLVD-GVKPCYVAFMAVLTACSHAGLVDE 421


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/743 (36%), Positives = 406/743 (54%), Gaps = 44/743 (5%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           LI GYS     REA  L+V M   G + P++ TF  +LSGC++     E IQVH  ++K 
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVT-PNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G    + I N L+  Y +   +D   +VF+ M +++ VS+ +LI G+A+    +EA+ LF
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            EM   G +PS  T    +SA   L D+ +G +V A++ +     N  + NAL+D+Y K 
Sbjct: 221 FEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKC 280

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFST 280
             +  A++LF E  + + V YN +++ YA     +E+L +  E+  Q  R DR      T
Sbjct: 281 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRV-----T 335

Query: 281 LLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR------------ 325
           +LS +   A  +DL  G+  H   I         + N ++DMY KCG+            
Sbjct: 336 MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS 395

Query: 326 -------------------FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                               E A E+F  +   + V W  MIS  VQK   E+A+ LF E
Sbjct: 396 NKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFRE 455

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    I AD+ T   I  A   L +  L K +H+++ ++G   ++   +AL+DM+A+ G 
Sbjct: 456 MQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGD 515

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
            + A+Q F +M ER++ +W A I   A  G+ +     F  M+  G +PD V  + VL+A
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH G +E+GL  F S+ + + + P+ EHY  MVD+L R+G   EA  L+  MP EP+++
Sbjct: 576 CSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 634

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W S++ +CR+HKN+E A  AA+++ ++   R A  +V +SNIYA AG+W  V++V+  +
Sbjct: 635 VWGSLLAACRVHKNVEMATYAAERINELAPQR-AGVHVLLSNIYASAGKWTDVARVRLNL 693

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           RE+GVRKV   S V++   +H FT+ DE HP+   I   ++ +       G+ PD S  L
Sbjct: 694 REKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVL 753

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D DE+ K   L  HSE+LAIAF LI T    PI V+KNLR C+DCH+  K+ S I  RE
Sbjct: 754 LDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNRE 813

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD++RFH F+ G CSC D+W
Sbjct: 814 IIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 260/564 (46%), Gaps = 43/564 (7%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLARR---VFKEMPQKDSVS 141
           T N+L Q+H  I K G + I      LV++  +I     LD AR+   +FKE  + D   
Sbjct: 37  TLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDAL 96

Query: 142 F--NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           F  N+LI G++  GL  EAI L+V M  LG  P+ +TF   LS    +A    G QVH  
Sbjct: 97  FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           VVK    E+VF+ N L+  Y++   +    K+F  M E + VS+  +I  YA  ++ KE+
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVD 318
           + LF E+       S      ++S  A   DL +G ++    I    +   KV  N+LVD
Sbjct: 217 VSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERV-CAYIGELGLKLNKVMVNALVD 275

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY KCG  + AK +F      + V +  ++S Y ++G   EAL +  EM +     D+ T
Sbjct: 276 MYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVT 335

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK--------------- 423
             S + ASA+L  L  GK  H +VIR+G       G+ ++DMY K               
Sbjct: 336 MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMS 395

Query: 424 ----------------SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
                           +G ++ A + F ++PERN V WN +IS   Q    +  ++ F +
Sbjct: 396 NKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFRE 455

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M   G + D V+++ + SAC + G  E   ++ ++  +K  +        ++VD+  R G
Sbjct: 456 MQGEGIKADRVTMMGIASACGYLGAPELA-KWVHTYIEKNGIPCDMRLNTALVDMFARCG 514

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
               A ++  +M  E D   W++ I +  +  N E A    +Q+       D   +V + 
Sbjct: 515 DPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 573

Query: 588 NIYAVAGQWESVSQVKKAMRERGV 611
              +  GQ E    +   M + G+
Sbjct: 574 TACSHGGQVEQGLHIFSLMEDHGI 597



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 236/504 (46%), Gaps = 33/504 (6%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y + G++    ++F  M +R  VSWT LI GY++ ++ +EA  LF +M  + G 
Sbjct: 170 NCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM-VEAGI 228

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P  VT   ++S C++    +   +V A I + G     ++ N+LVD Y K   +D A+R
Sbjct: 229 RPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKR 288

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E   ++ V +N +++ +A++GL  EA+ +  EM   G +P   T  +A+SA   L D
Sbjct: 289 LFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVD 348

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---------------------------- 221
           +  G+  H +V++        + N ++D+Y K                            
Sbjct: 349 LFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAG 408

Query: 222 ---HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
              +  V  A ++F ++PE + V +N MI+       ++++++LFRE+Q       +   
Sbjct: 409 FIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTM 468

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
             + S        ++ + +HT         ++++  +LVDM+A+CG  + A ++F  ++ 
Sbjct: 469 MGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTE 528

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
                WTA I     +GN E A  LF +M    +  D   F  +L A +    +  G  +
Sbjct: 529 RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHI 588

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
            S +   G    +     ++D+  ++G L++A    K MP E N V W +L++AC  + +
Sbjct: 589 FSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 648

Query: 458 AQATLKSFEDMVQSGYQPDSVSLL 481
            +    + E + +   Q   V +L
Sbjct: 649 VEMATYAAERINELAPQRAGVHVL 672



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 167/388 (43%), Gaps = 33/388 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V  N L+  Y+K G +  A+ LF+  VDR  V +  ++  Y+++   REA  +  +M 
Sbjct: 266 NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEML 325

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI--- 121
             G   PD VT  + +S  ++          H  +I+ G      I N ++D Y K    
Sbjct: 326 QQG-PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKP 384

Query: 122 ----RCLDL------------------------ARRVFKEMPQKDSVSFNALITGFAKEG 153
               R  DL                        A  VF ++P++++V +N +I+G  ++ 
Sbjct: 385 EMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKS 444

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L E+AI+LF EMQ  G K    T     SA   L    L + VH ++ K     ++ +  
Sbjct: 445 LFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNT 504

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+D++++      A ++F +M E D  ++   I   A     + +  LF ++       
Sbjct: 505 ALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKP 564

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
               F  +L+  ++   ++ G  I +         +++    +VD+  + G   EA ++ 
Sbjct: 565 DVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLI 624

Query: 334 ANLS-HISTVPWTAMISAYVQKGNLEEA 360
            ++    + V W ++++A     N+E A
Sbjct: 625 KSMPMEPNDVVWGSLLAACRVHKNVEMA 652



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 5/238 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+  VS N L +G++++G++ +A E+FN + +R AV W  +I G  QK+ F +A +LF
Sbjct: 394 MSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELF 453

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+ + G   D VT   + S C           VH  I K G    + +  +LVD +  
Sbjct: 454 REMQGE-GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA- 511

Query: 121 IRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            RC D   A +VF +M ++D  ++ A I   A EG  E A  LF +M   G KP    F 
Sbjct: 512 -RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFV 570

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
             L+A      +  G  + + +        +     ++DL  +   + EA  L   MP
Sbjct: 571 QVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP 628


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 402/687 (58%), Gaps = 15/687 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C E  +      VH  + K G  + + +  SLV++Y +      ARR+F  MP
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ V++ AL+TG+         +++FVEM  +G  PS +T  A L+A +   D+ LG+Q
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH + +K        + N+L  LY+K   +  A + F  +PE + +++  MI+  A +E+
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260

Query: 256 YKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             E  L LF ++       ++F  ++++S+   +LDL +G+Q+   +      + + V N
Sbjct: 261 CVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNL 363
           S + +Y + G  +EA  +F  +   S + W AMIS Y Q     K +L+      +AL +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F ++ R+ +  D  TF+SIL   + + +L  G+Q+H+  I+SGF+S+V   SAL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++DA + F EMP R  V+W ++IS  +Q+G  Q  ++ FE+M  +G +P+ ++ +S+
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACS+ GL+EE   YF+ M ++Y + P  +HY  M+D+  R G  ++A   + +  FEP
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E +WSS++  CR H N+E A  AAD+L ++ K +    Y+ + N+Y    +W+ V++V+
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLEL-KPKGIETYILLLNMYISTERWQDVARVR 619

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M++  V  +   SW+ +K KV+ F AND  HPQ  E+ + +ENL+++ K  GY+P  +
Sbjct: 620 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQN 679

Query: 664 CALHD--EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
             L D  +DE+    SLK+HSERLA+A  L+ TP G+ + V KN+  C DCH++IKL S 
Sbjct: 680 AELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSL 739

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDF 748
           +  REI VRDS R H FKDG CSC DF
Sbjct: 740 LENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 246/473 (52%), Gaps = 15/473 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y++ G    AR LF+ M +R  V+WT L+ GY+  +Q     ++FV+M  + G  P
Sbjct: 119 LVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM-LEMGRYP 177

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            + T    L+ C      +   QVH   IK+G  SI  + NSL   Y K+  LD A R F
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAF 237

Query: 132 KEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
             +P+K+ +++  +I+  A+ E   E  + LF++M   G  P++FT  + +S      D+
Sbjct: 238 WRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 297

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG+QV AF  K     N+ V N+ + LY +     EA +LF +M +   +++N MI+ Y
Sbjct: 298 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 357

Query: 251 AW-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           A              +  ++L +FR+L+ +      F FS++LSV +  + L+ G QIH 
Sbjct: 358 AQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHA 417

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           QTI +  +S+V V ++LV+MY KCG  ++A + F  +   + V WT+MIS Y Q G  +E
Sbjct: 418 QTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQE 477

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALL 418
           A+ LF EM  A +  ++ TF S+L A +    +   +     + +   +  V      ++
Sbjct: 478 AIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMI 537

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           DM+ + G ++DA    K    E N   W++L++ C  +G+ +    + + +++
Sbjct: 538 DMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE 590



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 183/369 (49%), Gaps = 21/369 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L S Y K G+L +A   F  + ++  ++WT +I   ++  +  E    LF+DM  D G
Sbjct: 218 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMD-G 276

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      N   QV A   K G  + L + NS +  Y +    D A 
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R+F++M     +++NA+I+G+      AK+ L       +A+ +F +++    KP  FTF
Sbjct: 337 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 396

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +K+ F+ +V V +AL+++Y+K  C+ +A K F EMP 
Sbjct: 397 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT 456

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              V++  MI+ Y+ + Q +E+++LF E++      ++  F +LLS  +    ++     
Sbjct: 457 RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHY 516

Query: 298 HTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYV 352
                    I   V     ++DM+ + GR E+A   F+ +      P    W+++++   
Sbjct: 517 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 353 QKGNLEEAL 361
             GN+E A 
Sbjct: 574 SHGNMELAF 582



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 14/204 (6%)

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           +++EA+ +  E      +   A +  +L    E+ SL   + +H  + ++G  +++F  +
Sbjct: 62  DVQEAMTMLTE----GKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVAT 117

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L++ Y + G+ +DA + F  MPERN+V+W AL++    N      L+ F +M++ G  P
Sbjct: 118 SLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC----RSGCFDE 531
              +L + L+AC     ++ G Q        Y ++   E   SM + LC    + G  D 
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQ-----VHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 232

Query: 532 AEKLMAQMPFEPDEIMWSSVINSC 555
           A +   ++P E + I W+++I++C
Sbjct: 233 ALRAFWRIP-EKNVITWTTMISAC 255



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G +  A + F  M  RT V+WT +I GYSQ  Q +EA +LF +MR
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 65  TDGGSDPDYVTFATLLSGCS 84
              G  P+ +TF +LLS CS
Sbjct: 487 L-AGVRPNEITFVSLLSACS 505


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/671 (35%), Positives = 407/671 (60%), Gaps = 5/671 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G L  AR+ F+ M  R  V W +++ GY +      A +LF +MR  G  +P
Sbjct: 182 LIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSG-CEP 240

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T A  LS C+        +Q+H+  +K G    + + N+L+  Y K RCLD A R+F
Sbjct: 241 NFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLF 300

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + +P+ D V++N +I+G  + GL +EA+ LF +M   G +P   T  + L A   L  + 
Sbjct: 301 ELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLK 360

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G++VH ++++     + F+ +AL+D+Y K   V  AR L+     +D V  + +I+ Y 
Sbjct: 361 QGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYV 420

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   +++L++FR L       +    +++L   A+   L +G++IH   +      +  
Sbjct: 421 LNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCY 480

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++L+DMYAKCGR + +  IF+ +S    V W +MIS++ Q G  +EAL+LF +MC   
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEG 540

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  +  T +S L A A L ++  GK++H  +I+    +++F+ SAL+DMYAK G+++ A+
Sbjct: 541 IKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELAL 600

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ MP++N VSWN++ISA   +G  + ++     M + GY+PD V+ L+++SAC+H G
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAG 660

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEGLQ F  MT++Y + P+ EH+A MVD+  RSG  D+A + +A MPF+PD  +W ++
Sbjct: 661 LVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGAL 720

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H+N+E A  A+ +LFK++   ++  YV MSNI AVAG+W+ VS+V++ M++  +
Sbjct: 721 LHACRVHRNVELADIASQELFKLDP-GNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKI 779

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY--KPDTSCALHDE 669
            K+  YSWV++ +  H+F A+D+ HP++ +I   ++ L+QE+++EGY  +PD    +H  
Sbjct: 780 LKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLCHPMH-P 838

Query: 670 DEEIKVESLKY 680
           D   +V   KY
Sbjct: 839 DNNTQVGFKKY 849



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 238/485 (49%), Gaps = 10/485 (2%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGY---NSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            LL GC         +Q+HA  +  G    ++ L +   L+  Y   R    A  VF  +
Sbjct: 37  ALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96

Query: 135 PQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD--FTFAAALSAGVGLAD 189
           P+     S+ +N LI GF   G +  A+  +V+M      PS    T    + +   L  
Sbjct: 97  PRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++LGR VH     T    +V+V +AL+ +YS    + +AR  F  MP  D V +NVM+  
Sbjct: 157 VSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDG 216

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y        +++LFR ++ +  + +    +  LSV A + DL  G Q+H+  +      E
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQE 276

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V VAN+L+ MYAKC   ++A  +F  L     V W  MIS  VQ G L+EAL LF +M R
Sbjct: 277 VAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLR 336

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +    D  T  S+L A  +L  L  GK++H ++IR+    + F  SAL+D+Y K   ++ 
Sbjct: 337 SGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRT 396

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   +      ++V  + +IS    NG ++  L+ F  +++   +P++V++ SVL AC+ 
Sbjct: 397 ARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACAS 456

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +  G Q  +    +     K    ++++D+  + G  D +  + ++M  + DE+ W+
Sbjct: 457 ISALPLG-QEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLK-DEVTWN 514

Query: 550 SVINS 554
           S+I+S
Sbjct: 515 SMISS 519



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 229/451 (50%), Gaps = 3/451 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q     N L+S Y K   L  A  LF  +     V+W  +I G  Q     EA  LF DM
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDM 334

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G+ PD VT  +LL   ++ +   +  +VH  II+   +    + ++LVD Y K R 
Sbjct: 335 -LRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRD 393

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  AR ++      D V  + +I+G+   G++E+A+++F  +     KP+  T A+ L A
Sbjct: 394 VRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPA 453

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              ++ + LG+++H +V++  +    +V +AL+D+Y+K   +  +  +F +M   D V++
Sbjct: 454 CASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTW 513

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI+ ++ N + +E+L LFR++       +    S+ LS  A+   +  G++IH   I 
Sbjct: 514 NSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK 573

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               +++   ++L+DMYAKCG  E A  +F  +   + V W ++ISAY   G ++E+++ 
Sbjct: 574 GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSF 633

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYA 422
              M       D  TF +++ A A    +  G QL   + +   ++      A ++D+Y+
Sbjct: 634 LHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYS 693

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +SG L  AIQ   +MP + +   W AL+ AC
Sbjct: 694 RSGRLDKAIQFIADMPFKPDAGIWGALLHAC 724



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 12/190 (6%)

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN---VFSGSALLDMYAKSGSLKD 429
           SAD+    ++LR       L LG Q+H+  + SG +SN   +   + LL MY  +   +D
Sbjct: 31  SADR--LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRD 88

Query: 430 AIQTFKEMPER---NIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVL 484
           A+  F  +P     + + WN LI      G     +  +  M    +   PD+ +L  V+
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVV 148

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            +C+  G +  G +  +   +   L       ++++ +   +G   +A      MP+  D
Sbjct: 149 KSCAALGAVSLG-RLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR-D 206

Query: 545 EIMWSSVINS 554
            ++W+ +++ 
Sbjct: 207 CVLWNVMMDG 216


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/704 (35%), Positives = 397/704 (56%), Gaps = 67/704 (9%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NSL+  Y K   L  AR VF +MP++D+VS+  ++ G  + G   +A+K F++M   G  
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           PS F     LS+        +GR+VH+FV+K      V VAN++L +Y K      AR +
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 232 FGEMPEVDGVSYNVMITCY----------------------AWNE---QYKE------SL 260
           F  M      S+N M++ Y                      +WN     Y +      +L
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280

Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           K F R L  +  +  +F  +++LS  AN   L++G+Q+H+  + T      ++ N+L+  
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIST 340

Query: 320 YAKCGRFE---------------------------------EAKEIFANLSHISTVPWTA 346
           YAK G  E                                 +A+E+F  +++   + WTA
Sbjct: 341 YAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTA 400

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI  Y Q G  +EA+ LF  M R+    +  T A++L A A LA L  GKQ+H   IRS 
Sbjct: 401 MIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSL 460

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSF 465
              +V   +A++ +YA+SGS+  A + F ++  R   V+W ++I A AQ+G  +  +  F
Sbjct: 461 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLF 520

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E+M++ G +PD V+ + V SAC+H G I++G +Y+  M  ++ + P+  HYA MVD+L R
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA + + +MP  PD ++W S++ +CR+ KN + A+ AA++L  ++   ++  Y A
Sbjct: 581 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDP-DNSGAYSA 639

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           ++N+Y+  G+W   +++ K  +++ V+K T +SW  ++SKVHVF A+D LHPQ + I +K
Sbjct: 640 LANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKK 699

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
              + +E+KK G+ PD +  LHD D+E+K E L  HSE+LAIAF LI+TPE + + +MKN
Sbjct: 700 AAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKN 759

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH AIK ISK+  REI VRD++RFHHF+DG+CSC+D+W
Sbjct: 760 LRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 275/579 (47%), Gaps = 79/579 (13%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N  + N L+S Y KSG LA AR +F  M +R AVSWT+++ G ++  +F +A K F+DM
Sbjct: 95  RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY----- 118
             +G + P       +LS C+  +      +VH+ +IK G +S + + NS++  Y     
Sbjct: 155 VGEGLA-PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213

Query: 119 ----------CKIRC----------------LDLARRVFKEMPQKDSVSFNALITGFAKE 152
                      K+R                 +DLA  +F+ M ++  VS+NA+I G+ + 
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273

Query: 153 GLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           GL++ A+K F  M      +P +FT  + LSA   L  + +G+Q+H+++++T    +  +
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333

Query: 212 ANALLDLYSKHDCV---------------------------------VEARKLFGEMPEV 238
            NAL+  Y+K   V                                  +AR++F  M   
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +++  MI  Y  N Q  E+++LFR +  +  + +    + +LS  A+   L  G+QIH
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            + I +     V V+N+++ +YA+ G    A+ +F  +     TV WT+MI A  Q G  
Sbjct: 454 CRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLG 513

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSA 416
           E+A+ LF EM R  +  D+ T+  +  A      +  GK+ +  ++   G +  +   + 
Sbjct: 514 EQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYAC 573

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           ++D+ A++G L +A +  + MP   + V W +L++AC    +A     + E ++     P
Sbjct: 574 MVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLS--IDP 631

Query: 476 DSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKK 513
           D+    S L+   S CG        +N   + +KLR  K
Sbjct: 632 DNSGAYSALANVYSACG-------RWNDAARIWKLRKDK 663



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 81/406 (19%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM------------------ 319
           F+ LL +    ++   GR IH   +    +    + N+L+                    
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 320 -------------------YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                              YAK GR  +A+ +FA +     V WT M+    + G   +A
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +  F++M    ++  Q    ++L + A   +  +G+++HSFVI+ G  S V   +++L M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207

Query: 421 YAK-------------------------------SGSLKDAIQTFKEMPERNIVSWNALI 449
           Y K                                G +  A+  F+ M ER+IVSWNA+I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267

Query: 450 SACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           +   QNG     LK F  M+  S  +PD  ++ SVLSAC++  +++ G Q        Y 
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQ-----MHSYI 322

Query: 509 LRPKKEHYASMVDIL----CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
           LR    + + +++ L     +SG  + A ++M +       ++  + +    +       
Sbjct: 323 LRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLG---D 379

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
            K A ++F +   RD   + AM   Y   GQ +   ++ ++M   G
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSG 425


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/684 (36%), Positives = 397/684 (58%), Gaps = 9/684 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGY---NSILIICNSLVDSYCKIRCLDLAR 128
           D +   TLL   +   +  + +Q+HA +   G    N+ L     L   Y     +  A+
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYL--ATKLAACYAVCGHMPYAQ 78

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F ++  K+S  +N++I G+A       A+ L+++M H G KP +FT+   L A   L 
Sbjct: 79  HIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLL 138

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              +GR+VHA VV     E+V+V N++L +Y K   V  AR +F  M   D  S+N M++
Sbjct: 139 LREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMS 198

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +  N + + + ++F +++   F   +     LLS   + +DL++G++IH   +      
Sbjct: 199 GFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESG 258

Query: 309 EVK---VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            V    + NS++DMY  C     A+++F  L     V W ++IS Y + G+  +AL LF 
Sbjct: 259 RVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFG 318

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M       D+ T  S+L A  ++++L LG  + S+V++ G++ NV  G+AL+ MYA  G
Sbjct: 319 RMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCG 378

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL  A + F EMPE+N+ +   +++    +G  +  +  F +M+  G  PD     +VLS
Sbjct: 379 SLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLS 438

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EG + F  MT+ Y + P+  HY+ +VD+L R+G  DEA  ++  M  +P+E
Sbjct: 439 ACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNE 498

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W++++++CR+H+N++ A  +A +LF++      + YV +SNIYA   +WE V  V+  
Sbjct: 499 DVWTALLSACRLHRNVKLAVISAQKLFELNP-DGVSGYVCLSNIYAAERRWEDVENVRAL 557

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           + +R +RK  +YS+VEL   VH F   D  H Q+++I  K+++L +++KK GYKPDTS  
Sbjct: 558 VAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLV 617

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L+D +EEIK + L  HSERLA+AFALINT  G+ I + KNLR C DCH  IK+ISK+T R
Sbjct: 618 LYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNR 677

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD  RFHHF+DG CSC  +W
Sbjct: 678 EIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 229/459 (49%), Gaps = 23/459 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S Y K G++  AR +F+ M+ R   SW  ++ G+ +  + R AF++F DMR DG  
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL---IICNSLVDSYCKIRCLDL 126
             D  T   LLS C +        ++H  +++ G +  +    + NS++D YC    +  
Sbjct: 223 G-DRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSC 281

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++F+ +  KD VS+N+LI+G+ K G   +A++LF  M  +G  P + T  + L+A   
Sbjct: 282 ARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           ++ + LG  V ++VVK  +V NV V  AL+ +Y+    +V A ++F EMPE +  +  VM
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +T +  + + +E++ +F E+        +  F+ +LS  ++   +  G++I  +     +
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYS 461

Query: 307 ISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL--- 361
           +       S LVD+  + G  +EA  +  N+    +   WTA++SA     N++ A+   
Sbjct: 462 VEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISA 521

Query: 362 -NLF--------IEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNV 411
             LF          +C +NI A +  +  +    A +A   L K   +SFV  +  +   
Sbjct: 522 QKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581

Query: 412 FSGSALL----DMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           F G        D+YAK   L + ++     P+ ++V ++
Sbjct: 582 FVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYD 620



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V    LI  Y   G+L  A  +F+ M ++   + T+++ G+    + REA  +F +M 
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
             G + PD   F  +LS CS     +E
Sbjct: 423 GKGVT-PDEGIFTAVLSACSHSGLVDE 448


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/639 (36%), Positives = 376/639 (58%), Gaps = 37/639 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++  Y K   ++  R +F  MP +DSVS+N +I+GFA  G    A+ +F+ MQ  G K
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+++T  + L+A   L D+  G+Q+H  ++  N   NVFV NAL DLY++   + +AR+L
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  M   + V++N+MI+ Y  N Q ++ + LF E+Q +     Q                
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQV--------------- 257

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                                A+S++  Y + G  +EA+++F  +     V WT MI   
Sbjct: 258 --------------------TASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGC 297

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  E+AL LF EM   N   D  T +S++ + A+LASL  G+ +H      G   ++
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL 357

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SAL+DMY K G  +DA   F  M  RN+VSWN++I   A NG     L  +E+M++ 
Sbjct: 358 LVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
             +PDSV+ + VLSAC H GL+EEG +YF SM+ ++ L P  +HYA MV++  RSG  D+
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDK 477

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L++ M  EP+ ++W++V++ C +  +++  + AA  L ++    +A PY+ +SN+YA
Sbjct: 478 AVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPF-NAVPYIMLSNMYA 536

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+ V+ ++  M+ + V+K +AYSW+E+ ++VH F A+D  HP    I  ++  L++
Sbjct: 537 ARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIR 596

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACT 710
           ++++ G+ P+T+  LHD  E+ K+ES+ YHSE+LA+A+ LI  P G +PI ++KN+R C 
Sbjct: 597 KLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCA 656

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K +S IT R + +RDS+RFHHF +G CSC+D+W
Sbjct: 657 DCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 216/461 (46%), Gaps = 38/461 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N ++S Y KSG +   R +F++M  R +VS+  +I G++   +   A  +F
Sbjct: 84  MTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVF 143

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M+ +G    +Y T  ++L+ C++        Q+H  II       + +CN+L D Y +
Sbjct: 144 LRMQKEGLKPTEY-THVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYAR 202

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D ARR+F  M  ++ V++N +I+G+ K    E+ I LF EMQ    KP   T ++ 
Sbjct: 203 CGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSV 262

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A                          ++    +D         EARK+FGE+ E D 
Sbjct: 263 LGA--------------------------YIQAGYID---------EARKVFGEIREKDE 287

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V + +MI   A N + +++L LF E+         +  S+++S  A    L  G+ +H +
Sbjct: 288 VCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGK 347

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
             +     ++ V+++LVDMY KCG   +A  IF+ +   + V W +MI  Y   G   EA
Sbjct: 348 AFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEA 407

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVIRSGFMSNVFSGSALLD 419
           L+L+  M   N+  D  TF  +L A      +  GK+   S   + G        + +++
Sbjct: 408 LSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVN 467

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++ +SG +  A+     M  E N + W  ++S C   GD +
Sbjct: 468 LFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIK 508



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 190/398 (47%), Gaps = 42/398 (10%)

Query: 156 EEAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           ++A +L   M    FKP+D F     L+      +I+  R++   + +     + F  NA
Sbjct: 39  DQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQ----RDNFSWNA 94

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L LY+K   V + R +F  MP  D VSYN +I+ +A N +   +L +F  +Q      +
Sbjct: 95  MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           ++   ++L+     LDL+ G+QIH + I+      V V N+L D+YA+CG  ++A+ +F 
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   + V W  MIS Y++    E+ ++LF EM  +N+  DQ T +S+L A         
Sbjct: 215 RMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA--------- 265

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
                                     Y ++G + +A + F E+ E++ V W  +I  CAQ
Sbjct: 266 --------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQ 299

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG  +  L  F +M+    +PD  ++ SV+S+C+    +  G Q  +       +     
Sbjct: 300 NGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHG-QVVHGKAFLMGVNDDLL 358

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             +++VD+ C+ G   +A  + + M    + + W+S+I
Sbjct: 359 VSSALVDMYCKCGVTRDAWTIFSTMQTR-NVVSWNSMI 395



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 169/360 (46%), Gaps = 42/360 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L   Y + G +  AR LF+ MV R  V+W ++I GY +  Q  +   LF +M+
Sbjct: 189 NVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQ 248

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 PD VT +++L                   I+ GY                   +
Sbjct: 249 V-SNLKPDQVTASSVLGA----------------YIQAGY-------------------I 272

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D AR+VF E+ +KD V +  +I G A+ G  E+A+ LF EM     +P  +T ++ +S+ 
Sbjct: 273 DEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332

Query: 185 VGLADIALGRQVH--AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
             LA +  G+ VH  AF++  N  +++ V++AL+D+Y K     +A  +F  M   + VS
Sbjct: 333 AKLASLYHGQVVHGKAFLMGVN--DDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVS 390

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI  YA N Q  E+L L+  +           F  +LS   +   ++ G++      
Sbjct: 391 WNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMS 450

Query: 303 VTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEA 360
               +       + +V+++ + G  ++A ++ +++S   +++ WT ++S  V KG+++  
Sbjct: 451 DQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHG 510


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/659 (36%), Positives = 380/659 (57%), Gaps = 6/659 (0%)

Query: 95  VHADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +HA II+     +   + N LV+ Y K+  L+ A+ V      +  V++ +LI+G     
Sbjct: 28  IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNR 87

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               A+  F  M+    +P+DFTF     A   +     G+Q+H   +K   + +VFV  
Sbjct: 88  RFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGC 147

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +  D+Y K     +A  +F EMP+ +  ++N  I+    + +  +++  F+E      + 
Sbjct: 148 SCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEP 207

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +   F   L+   + + L +GRQ+H   +      +V VAN L+D Y KCG    A+ +F
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF 267

Query: 334 ANLSH-ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
             + +  + V W +M++A VQ    E A  +F++  R  +       +S+L A AEL  L
Sbjct: 268 NRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSACAELGGL 326

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            LG+ +H+  +++    N+F GSAL+DMY K GS+++A Q F E+PERN+V+WNA+I   
Sbjct: 327 ELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGY 386

Query: 453 AQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           A  GD    L+ FE+M     G +P  V+L+S+LS CS  G +E G+Q F SM   Y + 
Sbjct: 387 AHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIE 446

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P  EH+A +VD+L RSG  D A + +  M  +P   +W +++ +CR+H   E  K AA++
Sbjct: 447 PGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEK 506

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF+++ + D+  +V +SN+ A AG+WE  + V+K M++ G++K   YSW+ +K+++HVF 
Sbjct: 507 LFELDHV-DSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQ 565

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           A D  H + +EI+  +  L   MK+ GY PDT+ +L D ++E K   + YHSE++A+AF 
Sbjct: 566 AKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFG 625

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI  P+G PI + KNLR C DCH+AIK IS+I GREI VRD+ RFH FKDG CSC+D+W
Sbjct: 626 LIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 231/474 (48%), Gaps = 12/474 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L++ Y K   L +A+ + +    RT V+WT LI G     +F  A   F +MR D  
Sbjct: 45  SNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDN- 103

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF  +    +         Q+H   +K G    + +  S  D YCK      A 
Sbjct: 104 VQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDAC 163

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F EMPQ++  ++NA I+   ++  + +AI  F E   +  +P+  TF A L+A V + 
Sbjct: 164 NMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMV 223

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VSYNVMI 247
            + LGRQ+HAF+V+  + E+V VAN L+D Y K   +V A  +F  +      VS+  M+
Sbjct: 224 RLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSML 283

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
                N + + +  +F + +    + + F  S++LS  A    L++GR +H   +     
Sbjct: 284 AALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVE 342

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V ++LVDMY KCG  E A+++F+ L   + V W AMI  Y  +G+++ AL LF EM
Sbjct: 343 DNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEM 402

Query: 368 CRAN--ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKS 424
              +  I     T  SIL   + + ++  G Q+  S  +  G        + ++D+  +S
Sbjct: 403 TLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRS 462

Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ----ATLKSFE-DMVQSG 472
           G +  A +  + M  +  +S W AL+ AC  +G  +    A  K FE D V SG
Sbjct: 463 GLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSG 516



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 204/422 (48%), Gaps = 11/422 (2%)

Query: 192 LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           LGR +HA +++T+      F++N L+++YSK D +  A+ +         V++  +I+  
Sbjct: 24  LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N ++  +L  F  ++      + F F  +    A       G+QIH   +    I +V
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  S  DMY K G   +A  +F  +   +   W A IS  VQ     +A+  F E    
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           +   +  TF + L A  ++  L+LG+QLH+F++R G+  +V   + L+D Y K G +  A
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263

Query: 431 IQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
              F  +  R N+VSW ++++A  QN + +     F    +   +P    + SVLSAC+ 
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAE 322

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G +E G +  +++  K  +       +++VD+  + G  + AE++ +++P E + + W+
Sbjct: 323 LGGLELG-RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWN 380

Query: 550 SVINSCRIHKNLEFAKKAADQL-FKMEKLRDAAPYVAMSNIYAV---AGQWESVSQVKKA 605
           ++I       +++ A +  +++      +R +  YV + +I +V    G  E   Q+ ++
Sbjct: 381 AMIGGYAHQGDIDMALRLFEEMTLGSHGIRPS--YVTLISILSVCSRVGAVERGIQIFES 438

Query: 606 MR 607
           MR
Sbjct: 439 MR 440


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/655 (37%), Positives = 392/655 (59%), Gaps = 5/655 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VHA +++     + +  N+L+  Y K   L LAR+VF  MP ++ VS N L++G+A  G 
Sbjct: 38  VHARVVRAARFDV-VQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGR 96

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           + +A+ L   ++   F  +++  ++A++A   +    +GRQ H + +K    E+ +V +A
Sbjct: 97  HRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA 153

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L +Y +   + EA K+F  +   +  ++N MI  +    Q   S  + R +        
Sbjct: 154 VLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWD 213

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              +  +L   A+  ++ +G Q+HTQ +       V V ++LVDMY KC    EA  +F 
Sbjct: 214 HVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFE 273

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            L   + V WTA+++AY Q    E+AL LF++M    +  ++ T+A  L + A LA+L  
Sbjct: 274 VLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKN 333

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  L +  +++G    +   +AL++MY+KSGS++DA + F  MP R++VSWN++I   A 
Sbjct: 334 GNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAH 393

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G A+  +++F DM+ +   P  V+ + VLSAC+  GL++EG  Y N M ++  ++P KE
Sbjct: 394 HGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKE 453

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  MV +LCR G  DEAE+ +       D + W S+++SC++++N     + A+Q+F++
Sbjct: 454 HYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQL 513

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
            K +D   YV +SN+YA A +W+ V +V++ MRE GVRK    SW+++ S+VHVFT+ D+
Sbjct: 514 -KPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDK 572

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP   +I +K++ L+ ++K  GY P+ + ALHD ++E K E L YHSE+LA+AF LI T
Sbjct: 573 KHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRT 632

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P+G  I +MKN+R C DCH AIKLIS  TGR I VRD+ RFH  +DG CSC D+W
Sbjct: 633 PKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 223/451 (49%), Gaps = 8/451 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N LI+ YVK G L  AR++F++M  R  VS  +L+ GY+   + R+A  L   +R
Sbjct: 49  DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LR 105

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                  +YV  ++ ++  +   + +   Q H   IK G      +C++++  YC+   +
Sbjct: 106 VADFGLNEYV-LSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM 164

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A +VF  +   +  +FN++I GF   G  + +  +   M     +    ++ A L   
Sbjct: 165 DEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHC 224

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++ LG QVH   +K     NV+V +AL+D+Y K D   EA ++F  +PE + VS+ 
Sbjct: 225 ASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 284

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++T Y  NE ++++L+LF +++      ++F ++  L+  A    L+ G  +   T+ T
Sbjct: 285 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 344

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V N+L++MY+K G  E+A+ +F ++     V W ++I  Y   G   EA+  F
Sbjct: 345 GHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAF 404

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M  A       TF  +L A A+L  +  G    + +++  G        + ++ +  +
Sbjct: 405 HDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCR 464

Query: 424 SGSLKDAIQTFKE--MPERNIVSWNALISAC 452
            G L +A + F E      ++V+W +L+S+C
Sbjct: 465 VGRLDEA-ERFIESNCIGTDVVAWRSLLSSC 494



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 215/431 (49%), Gaps = 17/431 (3%)

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +++LG+ VHA VV+    + V   N L+ LY K   +  AR++F  MP  + VS N+++
Sbjct: 30  GELSLGKAVHARVVRAARFD-VVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA + +++++L L R      F  +++  S+ ++  A+     +GRQ H   I     
Sbjct: 89  SGYASSGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
               V ++++ MY +C   +EA ++F N+S  +   + +MI+ ++ +G ++ + ++   M
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSM 205

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R     D  ++ ++L   A    + LG Q+H+  ++     NV+ GSAL+DMY K    
Sbjct: 206 VRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 265

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +A + F+ +PE+NIVSW A+++A  QN   +  L+ F DM   G +P+  +    L++C
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325

Query: 488 SHCGLIEEG--LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +    ++ G  L      T  + L P      +++++  +SG  ++A ++   MP   D 
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DV 381

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ---- 601
           + W+S+I     H     A++A +    M    +   YV    + +   Q   V +    
Sbjct: 382 VSWNSIIIGYAHHGR---AREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYY 438

Query: 602 VKKAMRERGVR 612
           +   M+E GV+
Sbjct: 439 LNIMMKEVGVK 449



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 190/423 (44%), Gaps = 78/423 (18%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATAREL-------FNSMVDRTAVSWTILIGGYSQKNQ- 52
           MP++N VS N+L+SGY  SG    A  L        N  V  +AV+ T  +  Y    Q 
Sbjct: 76  MPSRNPVSGNLLMSGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQC 135

Query: 53  ----------------------------FREAFKLFVDM-------------------RT 65
                                         EA K+F ++                   + 
Sbjct: 136 HGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQM 195

Query: 66  DGGSDP-----------DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           DG +             D+V++  +L  C+         QVH   +K      + + ++L
Sbjct: 196 DGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSAL 255

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           VD Y K      A RVF+ +P+K+ VS+ A++T + +  L E+A++LF++M+  G +P++
Sbjct: 256 VDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNE 315

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT+A AL++  GLA +  G  + A  +KT     + V NAL+++YSK   V +AR++F  
Sbjct: 316 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 375

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  D VS+N +I  YA + + +E+++ F ++ F     S   F  +LS  A     Q+G
Sbjct: 376 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACA-----QLG 430

Query: 295 RQIHTQTIVTTAISEVKVA------NSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAM 347
                   +   + EV V         +V +  + GR +EA+  I +N      V W ++
Sbjct: 431 LVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSL 490

Query: 348 ISA 350
           +S+
Sbjct: 491 LSS 493



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 12/172 (6%)

Query: 368 CRANISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           C   +S DQ   A  +  +A     LSLGK +H+ V+R+    +V   + L+ +Y K G 
Sbjct: 7   CPMGVSVDQRRAAVAVLRAAAAAGELSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGR 65

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSV 483
           L  A Q F  MP RN VS N L+S  A +G   DA A L+  +      +  +   L S 
Sbjct: 66  LGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVAD------FGLNEYVLSSA 119

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           ++A +H    + G Q  +    K  L       ++++ + C+    DEA K+
Sbjct: 120 VAATAHVRSYDMGRQ-CHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKV 170


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/625 (36%), Positives = 372/625 (59%), Gaps = 3/625 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGV 185
           +R VF ++ +K+   +NA+++ + +  L E+A+ +F E+  +   KP +FT    + A  
Sbjct: 160 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 219

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA-RKLFGEMPEVDGVSYN 244
           GL D+ LG+ +H    K + V +VFV NAL+ +Y K   V EA +++F  M      S+N
Sbjct: 220 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWN 279

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++  YA N   +++L L+ ++  +  D   F   +LL   +    L  G +IH   +  
Sbjct: 280 ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRN 339

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +  +  SL+ +Y  CG+   A+ +F  + H S V W  MI+ Y Q G  +EA+NLF
Sbjct: 340 GLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLF 399

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    I   +     +  A ++L++L LGK+LH F +++    ++F  S+++DMYAK 
Sbjct: 400 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 459

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  + + F  + E+++ SWN +I+    +G  +  L+ FE M++ G +PD  +   +L
Sbjct: 460 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            ACSH GL+E+GL+YFN M   + + PK EHY  +VD+L R+G  D+A +L+ +MP +PD
Sbjct: 520 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD 579

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +WSS+++SCRIH NL   +K A++L ++E  +    YV +SN++A +G+W+ V +V+ 
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK-PENYVLISNLFAGSGKWDDVRRVRG 638

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M++ G++K    SW+E+  KVH F   DE+ P+  E+R     L  ++   GY PDT  
Sbjct: 639 RMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGS 698

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD +EE K+  L+ HSE+LAI+F L+NT +G P+ V KNLR C DCH A K ISK+  
Sbjct: 699 VLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVN 758

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           R+I VRD+ RFHHF+DG CSC D+W
Sbjct: 759 RDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 195/392 (49%), Gaps = 8/392 (2%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           DI +GR++H  V  +    N FV N  ++ +YS      ++R +F ++   +   +N ++
Sbjct: 120 DIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIV 179

Query: 248 TCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y  NE +++++ +F EL   T      F    ++   A  LDL +G+ IH        
Sbjct: 180 SAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDL 239

Query: 307 ISEVKVANSLVDMYAKCGRFEEA-KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           +S+V V N+L+ MY KCG  EEA K +F  +   +   W A++  Y Q  +  +AL+L++
Sbjct: 240 VSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYL 299

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M  + +  D  T  S+L A + + SL  G+++H F +R+G   + F G +LL +Y   G
Sbjct: 300 QMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG 359

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
               A   F  M  R++VSWN +I+  +QNG     +  F  M+  G QP  ++++ V  
Sbjct: 360 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 419

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACS    +  G +  +    K  L       +S++D+  + GC   ++++  ++  E D 
Sbjct: 420 ACSQLSALRLG-KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDV 477

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
             W+ +I    IH      K+A +   KM +L
Sbjct: 478 ASWNVIIAGYGIHGR---GKEALELFEKMLRL 506



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 227/486 (46%), Gaps = 4/486 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V    +I+ Y   G+ + +R +F+ +  +    W  ++  Y++   F +A  +F ++ + 
Sbjct: 142 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 201

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
               PD  T   ++  C+          +H    K    S + + N+L+  Y K   ++ 
Sbjct: 202 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 261

Query: 127 A-RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           A +RVF  M  K   S+NAL+ G+A+     +A+ L+++M   G  P  FT  + L A  
Sbjct: 262 AVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            +  +  G ++H F ++     + F+  +LL LY        A+ LF  M     VS+NV
Sbjct: 322 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 381

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y+ N    E++ LFR++        +     +    +    L++G+++H   +   
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 441

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              ++ V++S++DMYAK G    ++ IF  L       W  +I+ Y   G  +EAL LF 
Sbjct: 442 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 501

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKS 424
           +M R  +  D  TF  IL A +    +  G +  + ++        +   + ++DM  ++
Sbjct: 502 KMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRA 561

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLS 482
           G + DA++  +EMP + +   W++L+S+C  +G+     K    +++    +P++  L+S
Sbjct: 562 GRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 621

Query: 483 VLSACS 488
            L A S
Sbjct: 622 NLFAGS 627



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 186/444 (41%), Gaps = 55/444 (12%)

Query: 257 KESLKLF-RELQFTRFDRSQF--PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           KE+L    RE      D +Q       LL     + D+++GR++H     +T      V 
Sbjct: 84  KEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVL 143

Query: 314 NS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN- 371
           N+ ++ MY+ CG   +++ +F  L   +   W A++SAY +    E+A+++F E+     
Sbjct: 144 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 203

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  T   +++A A L  L LG+ +H    +   +S+VF G+AL+ MY K G +++A+
Sbjct: 204 HKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 263

Query: 432 Q-TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-- 488
           +  F  M  + + SWNAL+   AQN D +  L  +  M  SG  PD  ++ S+L ACS  
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323

Query: 489 ---HCGLIEEGLQYFNSMT--------------------QKYKLRPKKEH-----YASMV 520
              H G    G    N +                         L    EH     +  M+
Sbjct: 324 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 383

Query: 521 DILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
               ++G  DEA  L  QM     +P EI    V  +C     L   K+      K    
Sbjct: 384 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 443

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D     ++ ++YA  G      ++   +RE+ V      SW       +V  A   +H 
Sbjct: 444 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV-----ASW-------NVIIAGYGIHG 491

Query: 638 QTNEIRRKIENLMQEMKKEGYKPD 661
           +  E       L ++M + G KPD
Sbjct: 492 RGKEAL----ELFEKMLRLGLKPD 511



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 115/234 (49%), Gaps = 13/234 (5%)

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQA----TFASILRASAELASLSLGKQLHSFVI 403
           I    + GNL+EAL+ F++    ++  D A        +L+A  +   + +G++LH  V 
Sbjct: 74  IKKLCESGNLKEALD-FLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVS 132

Query: 404 RSGFMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            S    N F   + ++ MY+  GS  D+   F ++  +N+  WNA++SA  +N   +  +
Sbjct: 133 ASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAM 192

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGL-QYFNSMTQKYKLRPKKEHYASMV 520
             F +++  + ++PD+ +L  V+ AC+  GL++ GL Q  + M  K  L        +++
Sbjct: 193 SIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQIIHGMATKMDLVSDVFVGNALI 250

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
            +  + G  +EA K +  +        W++++  C   +N +  +KA D   +M
Sbjct: 251 AMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL--CGYAQNSD-PRKALDLYLQM 301


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/583 (40%), Positives = 371/583 (63%), Gaps = 8/583 (1%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P    ++  L+    L  +  GR +HA +  + F +++ + N +L++Y+K   + EA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF +MP  D VS+ V+I+ Y+ + Q  E+L LF ++    F  ++F  S+LL       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
               GRQ+H  ++       V V +SL+DMYA+     EAK IF +L+  + V W A+I+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            + +KG  E  + LF++M R        T++S+  A A   SL  GK +H+ VI+SG   
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             + G+ L+DMYAKSGS+KDA + F+ + +++IVSWN++IS  AQ+G     L+ FE M+
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           ++  QP+ ++ LSVL+ACSH GL++EG QY+  + +K+K+  +  H+ ++VD+L R+G  
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL 459

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           +EA K + +MP +P   +W +++ SCR+HKN++    AA+Q+F+++   D+ P+V +SNI
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDP-HDSGPHVLLSNI 518

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+    ++V+K M+E GV+K  A SWVE++++VHVF AND+ HP   EI+R  E +
Sbjct: 519 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 578

Query: 650 MQEMKKEGYKPDTSCAL---HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             ++K+ GY PDTS  L   + +D E+K   L+YHSE+LA+AFA++ TP G  I + KN+
Sbjct: 579 SGKIKEIGYVPDTSHVLFFMNQQDRELK---LQYHSEKLALAFAVLKTPPGLTIRIKKNI 635

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH+A K  S++ GREI VRD++RFHHF  G CSCRD+W
Sbjct: 636 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 218/394 (55%), Gaps = 3/394 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G  +P+   ++ +L+ C+      +   +HA I    +   L++ N +++ Y K
Sbjct: 93  LDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAK 152

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A+ +F +MP KD VS+  LI+G+++ G   EA+ LF +M HLGF+P++FT ++ 
Sbjct: 153 CGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212

Query: 181 LSA-GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A G G +D   GRQ+HAF +K  +  NV V ++LLD+Y++   + EA+ +F  +   +
Sbjct: 213 LKASGTGPSD-HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I  +A   + +  ++LF ++    F+ + F +S++ +  A+   L+ G+ +H 
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHA 331

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I +       + N+L+DMYAK G  ++AK++F  L     V W ++IS Y Q G   E
Sbjct: 332 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF +M +A +  ++ TF S+L A +    L  G+     + +    + V     ++D
Sbjct: 392 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 451

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
           +  ++G L +A +  +EMP +   + W AL+ +C
Sbjct: 452 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSC 485



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 239/496 (48%), Gaps = 58/496 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N +++ Y K G+L  A++LF+ M  +  VSWT+LI GYSQ  Q  EA  LF  M 
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM- 197

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+  T ++LL       + +   Q+HA  +K+GY+  + + +SL+D Y +   +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F  +  K+ VS+NALI G A++G  E  ++LF++M   GF+P+ FT+++  +A 
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+ VHA V+K+      ++ N L+D+Y+K   + +A+K+F  + + D VS+N
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ YA +    E+L+LF ++   +   ++  F ++L+  ++   L  G Q + + +  
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKK 436

Query: 305 TAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEAL 361
             I E +VA+  ++VD+  + GR  EA +    +    T   W A++ +           
Sbjct: 437 HKI-EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGS----------- 484

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                 CR + + D   +A+      EL     G  +         +SN+         Y
Sbjct: 485 ------CRMHKNMDLGVYAA--EQIFELDPHDSGPHV--------LLSNI---------Y 519

Query: 422 AKSGSLKDAIQTFKEMPERNI-----VSWNAL---ISACAQNGDAQATLKSFEDMVQS-- 471
           A +G L DA +  K M E  +      SW  +   +     N D+    +  + M +   
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579

Query: 472 ------GYQPDSVSLL 481
                 GY PD+  +L
Sbjct: 580 GKIKEIGYVPDTSHVL 595


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/727 (36%), Positives = 405/727 (55%), Gaps = 13/727 (1%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP--DYVTFATLLSGCSEPDTA 89
           M  R  VSW  LI GY+Q   + E   LF + R    SD   D  TF+  LS C      
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM---SDLRLDKFTFSNALSVCGRTLDL 57

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
                +HA I   G    +++ NSL+D YCK   +D AR VF+   + DSVS+N+LI G+
Sbjct: 58  RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 117

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLAD-IALGRQVHAFVVKTNFVE 207
            + G N+E ++L V+M   G   + +   +AL A G   +  I  G+ +H   VK     
Sbjct: 118 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 177

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY-----KESLKL 262
           +V V  ALLD Y+K   + +A K+F  MP+ + V YN MI  +   E        E++ L
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F E+Q      S+F FS++L   +     + G+QIH Q       S+  + N+LV++Y+ 
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G  E+  + F +   +  V WT++I  +VQ G  E  L LF E+  +    D+ T + +
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L A A LA++  G+Q+H++ I++G  +     ++ + MYAK G +  A  TFKE    +I
Sbjct: 358 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDI 417

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSW+ +IS+ AQ+G A+  +  FE M  SG  P+ ++ L VL ACSH GL+EEGL+YF  
Sbjct: 418 VSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 477

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           M + + + P  +H A +VD+L R+G   EAE  +    FE D +MW S++++CR+HK  +
Sbjct: 478 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 537

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
             K+ A+++ ++E    AA YV + NIY  AG     ++++  M++RGV+K    SW+E+
Sbjct: 538 TGKRVAERVIELEP-EAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEV 596

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
            + VH F A D  HP +  I  ++E +++E+KK  Y  +   +   E +      + YHS
Sbjct: 597 GNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHS 656

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E+LA+ F +I+ P  +P+ VMKNLR+C  CH  +KL S++  REI +RD  RFH F+DG 
Sbjct: 657 EKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGS 716

Query: 743 CSCRDFW 749
           CSC D+W
Sbjct: 717 CSCGDYW 723



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 230/452 (50%), Gaps = 8/452 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN LI  Y K G +  AR +F S  +  +VSW  LI GY +     E  +L V M   G 
Sbjct: 79  TNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGL 138

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           +   Y   + L +  S   ++ E  + +H   +K G +  +++  +L+D+Y KI  L+ A
Sbjct: 139 NLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDA 198

Query: 128 RRVFKEMPQKDSVSFNALITGFAK-----EGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++FK MP  + V +NA+I GF +     +    EA+ LF EMQ  G KPS+FTF++ L 
Sbjct: 199 TKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILK 258

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +     G+Q+HA + K N   + F+ NAL++LYS    + +  K F   P++D VS
Sbjct: 259 ACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVS 318

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I  +  N Q++  L LF EL F+     +F  S +LS  AN   ++ G QIH   I
Sbjct: 319 WTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAI 378

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   +   + NS + MYAKCG  + A   F    +   V W+ MIS+  Q G  +EA++
Sbjct: 379 KTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD 438

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF  M  + I+ +  TF  +L A +    +  G +    + +  G   NV   + ++D+ 
Sbjct: 439 LFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLL 498

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++G L +A     +   E + V W +L+SAC
Sbjct: 499 GRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 530



 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 50/232 (21%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T+  N  I  Y K G++ +A   F    +   VSW+++I   +Q    +EA  LF  M+ 
Sbjct: 386 TIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKG 445

Query: 66  DGGSDPDYVTFATLLSGCSE---------------------PDT------------ANEL 92
            G + P+++TF  +L  CS                      P+             A  L
Sbjct: 446 SGIA-PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 504

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKI-RCLDLARRVFK---EMPQKDSVSFNALITG 148
            +  + I+  G+    ++  SL+ S C++ +  D  +RV +   E+  + + S+  L   
Sbjct: 505 AEAESFIMDSGFEGDPVMWRSLL-SACRVHKATDTGKRVAERVIELEPEAAASYVLLYNI 563

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           +   G+   A ++   M+  G K              GL+ I +G  VH+FV
Sbjct: 564 YNDAGIQMPATEIRNLMKDRGVKKEP-----------GLSWIEVGNVVHSFV 604


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/750 (34%), Positives = 403/750 (53%), Gaps = 98/750 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +I  Y  SG L  AR+LF     R+ ++W+ LI GY +     EA +LF
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+ + G  P+  T+ ++L  CS      +  Q+HA  IK  ++S   +   LVD Y K
Sbjct: 127 WEMQYE-GERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAK 185

Query: 121 IRCLDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +C+  A  +F+  P K + V + A++TG+++ G   +AI+ F +M+  G + + FTF +
Sbjct: 186 CKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPS 245

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++    G QVH  +V++ F  NVFV +AL+D+YSK   +  AR++   M   D
Sbjct: 246 ILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDD 305

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N MI         +E+L LFR +        +F + +L                  
Sbjct: 306 PVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL------------------ 347

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                       V N+LVDMYAK G F+ A ++F  ++    + WT++++  V  G+ EE
Sbjct: 348 ------------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEE 395

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF EM    I  DQ   A++L A                      + N     +L+ 
Sbjct: 396 ALRLFCEMRIMGIHPDQIVIAAVLSA----------------------LDN-----SLVS 428

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G ++DA + F  M  +++++W ALI   AQNG                       
Sbjct: 429 MYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG----------------------- 465

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                           G  YF SM + Y ++P  EHYA M+D+L RSG   EA++L+ QM
Sbjct: 466 ---------------RGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM 510

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             +PD  +W +++ +CR+H N+E  ++AA+ LF++E  ++A PYV +SN+Y+ AG+WE  
Sbjct: 511 AVQPDATVWKALLAACRVHGNVELGERAANNLFELEP-KNAVPYVLLSNLYSAAGKWEEA 569

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           ++ ++ M+ RGV K    SW+E+ SKVH F + D  HP+T EI  K++ +M  +K+ GY 
Sbjct: 570 AKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYV 629

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD + ALHD DEE K   L YHSE+LA+AF L+  P G+PI + KNLR C DCH A+K +
Sbjct: 630 PDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYV 689

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S +  R + +RDS+ FHHF++G CSC D+W
Sbjct: 690 SGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 199/442 (45%), Gaps = 78/442 (17%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L    L   +  FV     V +   +N +L   SK   V +ARKLF  MP+ D  S+N M
Sbjct: 19  LEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTM 78

Query: 247 ITCYA----WNEQYK---------------------------ESLKLFRELQFTRFDRSQ 275
           I  YA     NE  K                           E+L+LF E+Q+     +Q
Sbjct: 79  IGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQ 138

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA- 334
           F + ++L V +  + L+ G+QIH   I T   S   V   LVDMYAKC    EA+ +F  
Sbjct: 139 FTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFEL 198

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
                + V WTAM++ Y Q G+  +A+  F +M    I  +Q TF SIL A   +++   
Sbjct: 199 APDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGF 258

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G Q+H  ++RSGF +NVF GSAL+DMY+K G L +A +  + M   + VSWN++I  C +
Sbjct: 259 GAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVR 318

Query: 455 NGDAQATLKSFEDM------------------------VQSGY------------QPDSV 478
            G  +  L  F  M                         + GY              D +
Sbjct: 319 QGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVI 378

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--------SMVDILCRSGCFD 530
           S  S+++ C H G  EE L+ F  M +   + P +   A        S+V +  + GC +
Sbjct: 379 SWTSLVTGCVHNGSYEEALRLFCEM-RIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIE 437

Query: 531 EAEKLMAQMPFEPDEIMWSSVI 552
           +A K+   M  + D I W+++I
Sbjct: 438 DANKVFDSMEIQ-DVITWTALI 458



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 34/199 (17%)

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
           +L    L   +  FV   G + +    + +L   +K G + DA + F  MP+R+  SWN 
Sbjct: 18  QLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNT 77

Query: 448 LISACAQNG--------------------------------DAQATLKSFEDMVQSGYQP 475
           +I A A +G                                D +A L+ F +M   G +P
Sbjct: 78  MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEA-LELFWEMQYEGERP 136

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           +  +  SVL  CS   L+E+G Q  ++   K +          +VD+  +  C  EAE L
Sbjct: 137 NQFTWGSVLRVCSMYVLLEKGKQ-IHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 536 MAQMPFEPDEIMWSSVINS 554
               P + + ++W++++  
Sbjct: 196 FELAPDKRNHVLWTAMVTG 214


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/698 (35%), Positives = 405/698 (58%), Gaps = 2/698 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +I+ Y++ G+   A  +F  M  R  V++  LI G++Q      A ++F +M+  G S
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VT ++LL+ C+      +  Q+H+ + K G +S  I+  SL+D Y K   ++ A  
Sbjct: 242 -PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F    + + V +N ++  F +     ++ +LF +MQ  G +P+ FT+   L       +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I LG Q+H+  VKT F  +++V+  L+D+YSK+  + +AR++   + E D VS+  MI  
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +E  K++L  F+E+Q           ++ +S  A    ++ G QIH +  V+    +
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V + N+LV++YA+CGR  EA   F  +     +    ++S + Q G  EEAL +F+ M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + +  +  TF S L ASA LA +  GKQ+H+ VI++G       G+AL+ +Y K GS +D
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F EM ERN VSWN +I++C+Q+G     L  F+ M + G +P+ V+ + VL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEGL YF SM+ +Y +RP+ +HYA ++DI  R+G  D A+K + +MP   D ++W 
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV  +W +  QV+K MR+R
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEP-HDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GVRK    SW+E+K+ VH F   D LHP   +I   +  +   + K GYK +     HD+
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDK 839

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
           ++E +  +   HSE+LA+ F L++ P   P+ V+KNLR
Sbjct: 840 EQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLR 877



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 301/567 (53%), Gaps = 3/567 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +  N+LI  Y K+G +  AR +F  +  R  VSW  ++ GY+Q     EA  L+  M   
Sbjct: 78  IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA 137

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G     YV  +++LS C++ +   +   +HA   K G+ S + + N+++  Y +     L
Sbjct: 138 GVVPTPYV-LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRL 196

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A RVF +MP +D+V+FN LI+G A+ G  E A+++F EMQ  G  P   T ++ L+A   
Sbjct: 197 AERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACAS 256

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  G Q+H+++ K     +  +  +LLDLY K   V  A  +F      + V +N+M
Sbjct: 257 LGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLM 316

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  +       +S +LF ++Q      +QF +  +L       ++ +G QIH+ ++ T  
Sbjct: 317 LVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++ V+  L+DMY+K G  E+A+ +   L     V WT+MI+ YVQ    ++AL  F E
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M +  I  D    AS +   A + ++  G Q+H+ +  SG+  +V   +AL+++YA+ G 
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +++A  +F+EM  ++ ++ N L+S  AQ+G  +  LK F  M QSG + +  + +S LSA
Sbjct: 497 IREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            ++   I++G Q  ++   K     + E   +++ +  + G F++A+   ++M  E +E+
Sbjct: 557 SANLAEIKQGKQ-IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEV 614

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFK 573
            W+++I SC  H     A    DQ+ K
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKK 641



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 250/469 (53%), Gaps = 4/469 (0%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRTDGGSDPDYVTFATLLSGCSEPDTAN 90
           M  R A S    + G+       +   LF D  R  GG  P  + FA  L  C       
Sbjct: 1   MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58

Query: 91  ELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           +++ ++HA  +  G     I+ N L+D Y K   +  ARRVF+E+  +D+VS+ A+++G+
Sbjct: 59  QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+ GL EEA+ L+ +M   G  P+ +  ++ LS+       A GR +HA   K  F   +
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV NA++ LY +      A ++F +MP  D V++N +I+ +A     + +L++F E+QF+
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                    S+LL+  A+  DLQ G Q+H+        S+  +  SL+D+Y KCG  E A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF +    + V W  M+ A+ Q  +L ++  LF +M  A I  +Q T+  ILR     
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             + LG+Q+HS  +++GF S+++    L+DMY+K G L+ A +  + + E+++VSW ++I
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +   Q+   +  L +F++M + G  PD++ L S +S C+    + +GLQ
Sbjct: 419 AGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 184/352 (52%), Gaps = 3/352 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           + +LI  Y K G L  AR +   + ++  VSWT +I GY Q    ++A   F +M+   G
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ-KCG 441

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD +  A+ +SGC+  +   + +Q+HA I   GY+  + I N+LV+ Y +   +  A 
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F+EM  KD ++ N L++GFA+ GL+EEA+K+F+ M   G K + FTF +ALSA   LA
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +I  G+Q+HA V+KT       V NAL+ LY K     +A+  F EM E + VS+N +IT
Sbjct: 562 EIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIIT 621

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             + + +  E+L LF +++      +   F  +L+  ++   ++ G            I 
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 309 EVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 + ++D++ + G+ + AK+    +      + W  ++SA     N+E
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIE 733


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/726 (36%), Positives = 408/726 (56%), Gaps = 50/726 (6%)

Query: 69  SDPDYVTFAT-----LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI-- 121
           SDP Y          LL+ C  PD  + L Q+H+ IIK G ++ L   + L++ +C +  
Sbjct: 16  SDPPYKLLENHPHLNLLAKC--PDIPS-LKQIHSLIIKSGLHNTLFAQSKLIE-FCALSP 71

Query: 122 -RCLDLARRVFKEMPQKDSVSF--NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            R L  A  +F  +  +    F  N LI   +       ++ LF +M H G  P+  TF 
Sbjct: 72  SRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFP 131

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS-----KHDCVV------- 226
           +   +          +Q+HA  +K     +  V  +L+ +YS     +H  +V       
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191

Query: 227 -------------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
                              +AR+LF E+P  D VS+N MI  Y  + +++E+L  F  +Q
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                 +Q    ++LS   +   L++G+ I +          +++ N+LVDMY+KCG   
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIG 311

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
            A+++F  +     + W  MI  Y      EEAL LF  M R N++ +  TF ++L A A
Sbjct: 312 TARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACA 371

Query: 388 ELASLSLGKQLHSFVIR----SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            L +L LGK +H+++ +    +G ++NV   ++++ MYAK G ++ A Q F+ M  R++ 
Sbjct: 372 SLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLA 431

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SWNA+IS  A NG A+  L  FE+M+  G+QPD ++ + VLSAC+  G +E G +YF+SM
Sbjct: 432 SWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM 491

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            + Y + PK +HY  M+D+L RSG FDEA+ LM  M  EPD  +W S++N+CRIH  +EF
Sbjct: 492 NKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEF 551

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            +  A++LF++E   ++  YV +SNIYA AG+W+ V++++  + ++G++KV   + +E+ 
Sbjct: 552 GEYVAERLFELEP-ENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEID 610

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
             VH F   D+ HPQ+  I R ++ + + +++ G+ PDTS  L+D DEE K  +L  HSE
Sbjct: 611 GVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSE 670

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LAIAF LI+T  GS I ++KNLR C +CH+A KLISKI  REI  RD +RFHHFKDGFC
Sbjct: 671 KLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFC 730

Query: 744 SCRDFW 749
           SC D W
Sbjct: 731 SCNDRW 736



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 217/480 (45%), Gaps = 40/480 (8%)

Query: 19  SGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTF 76
           S +L+ A  LF+S+  +      W  LI  +S       +  LF  M    G  P+  TF
Sbjct: 72  SRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQM-LHSGLYPNSHTF 130

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL------------ 124
            +L   C++    +E  Q+HA  +K   +    +  SL+  Y ++  L            
Sbjct: 131 PSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTL 190

Query: 125 -------------------DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
                              D ARR+F E+P KD VS+NA+I G+ + G  EEA+  F  M
Sbjct: 191 RDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM 250

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           Q     P+  T  + LSA   L  + LG+ + ++V    F +N+ + NAL+D+YSK   +
Sbjct: 251 QEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEI 310

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
             ARKLF  M + D + +N MI  Y     Y+E+L LF  +       +   F  +L   
Sbjct: 311 GTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370

Query: 286 ANKLDLQIGRQIHT----QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           A+   L +G+ +H         T  ++ V +  S++ MYAKCG  E A+++F ++   S 
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
             W AMIS     G+ E AL LF EM       D  TF  +L A  +   + LG +  S 
Sbjct: 431 ASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSS 490

Query: 402 VIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           + +  G    +     ++D+ A+SG   +A      M  E +   W +L++AC  +G  +
Sbjct: 491 MNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 177/361 (49%), Gaps = 7/361 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS   LI+GYV  G++  AR LF+ +  +  VSW  +I GY Q  +F EA   F  M
Sbjct: 191 RDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM 250

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +    P+  T  ++LS C    +      + + +   G+   L + N+LVD Y K   
Sbjct: 251 Q-EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGE 309

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  AR++F  M  KD + +N +I G+    L EEA+ LF  M      P+D TF A L A
Sbjct: 310 IGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPA 369

Query: 184 GVGLADIALGRQVHAFVVK----TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
              L  + LG+ VHA++ K    T  V NV +  +++ +Y+K  CV  A ++F  M    
Sbjct: 370 CASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS 429

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             S+N MI+  A N   + +L LF E+    F      F  +LS       +++G +  +
Sbjct: 430 LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFS 489

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                  IS +++    ++D+ A+ G+F+EAK +  N+        W ++++A    G +
Sbjct: 490 SMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQV 549

Query: 358 E 358
           E
Sbjct: 550 E 550


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/688 (36%), Positives = 399/688 (57%), Gaps = 18/688 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL   +   +    +Q+HA ++K G+ S  ++ N+L+D Y K   L +A  VF  MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ VS+ AL+ GF   G   E ++LF EM+  G  P++FT +A L A  G      G Q
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQ 124

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   V+T F  +  VAN+L+ +YSK     +AR++F  +P  +  ++N MI+ YA   Q
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 256 YKESLKLFRELQFTRFDRS--QFPFSTLLSVVANKLDLQIGRQIHTQTIV--TTAISEVK 311
            ++SL +FRE+Q  R D    +F F++LL   +     + G Q+H    V   +  S   
Sbjct: 185 GRDSLLVFREMQ-RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A +L+D+Y KC R   A ++F  L   + + WT +I  + Q+G ++EA+ LF     + 
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           + AD    +S++   A+ A +  GKQ+H +  ++    +V   ++L+DMY K G   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+EMP RN+VSW A+I+   ++G  +  +  FE+M + G + D V+ L++LSACSH G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++E  +YF+ + Q  ++RPK EHYA MVD+L R+G   EA++L+  MP EP   +W ++
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+HK++   ++  D L  ++   +   YV +SNI A AG+W     ++ AMR +G+
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDG-DNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 542

Query: 612 RKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALHDE 669
           RK    SW E+  +VH F    D+ HPQ  +IRR +  +   M++  GY  D  CALHD 
Sbjct: 543 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 602

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSP--------ILVMKNLRACTDCHAAIKLISK 721
           DEE +VESL+ HSERLA+   L+    G          + V KNLR C DCH  +K +S 
Sbjct: 603 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 662

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  R + VRD++RFH F++G CSCRD+W
Sbjct: 663 VVRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 237/460 (51%), Gaps = 8/460 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  Y K G L  A E+F+ M +R  VSWT L+ G+    + RE  +LF +
Sbjct: 36  GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 95

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G S P+  T +  L  C     A   +Q+H   ++ G+    ++ NSLV  Y K R
Sbjct: 96  MRGSGTS-PNEFTLSATLKACGGGTRAG--VQIHGVCVRTGFEGHDVVANSLVVMYSKGR 152

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAAL 181
               ARRVF  +P ++  ++N++I+G+A  G   +++ +F EMQ     +P +FTFA+ L
Sbjct: 153 WTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 212

Query: 182 SAGVGLADIALGRQVHA--FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A  GL     G QVHA   V   +   N  +A ALLD+Y K   +  A ++F  +   +
Sbjct: 213 KACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRN 272

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            + +  +I  +A   Q KE++ LFR    +         S++++V A+   ++ G+Q+H 
Sbjct: 273 AIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHC 332

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            T  T A  +V VANSLVDMY KCG   EA   F  +   + V WTAMI+   + G+  E
Sbjct: 333 YTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGRE 392

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LL 418
           A++LF EM    + AD+  + ++L A +    +   ++  S + +   M       A ++
Sbjct: 393 AIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMV 452

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           D+  ++G L++A +    MP E  +  W  L+SAC  + D
Sbjct: 453 DLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKD 492



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  N +    L+  YVK   L  A ++F+ +  R A+ WT +I G++Q+ Q +EA  LF 
Sbjct: 238 PASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR 297

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              + G     +V  +++++  ++     +  QVH    K      + + NSLVD Y K 
Sbjct: 298 RFWSSGVRADGHV-LSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 356

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                A R F+EMP ++ VS+ A+I G  K G   EAI LF EMQ  G +  +  + A L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALL 416

Query: 182 SA 183
           SA
Sbjct: 417 SA 418


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/680 (36%), Positives = 400/680 (58%), Gaps = 7/680 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL  CS+    ++ +QVHA  +  G+   LI+ N L+D Y K   +DLA  VF  M 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ VS+ AL+ G+ +EG  + ++ L  EM + G KP++FTF+ +L A   L  +  G Q
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   VK+ F     V NA +D+YSK   +  A ++F +MP  + VS+N MI  +     
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK--VA 313
            ++SL LF+ +Q       +F F++ L        ++ G QIH   I       ++  +A
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           +++VD+YAKCG   EA+++F  +   + + W+A+I  + Q+GNL EA++LF ++  +  +
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D    + ++   A+LA +  GKQ+H ++++     ++   ++++DMY K G  ++A + 
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERL 366

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F EM  RN+VSW  +I+   ++G  +  +  F  M   G + D V+ L++LSACSH GLI
Sbjct: 367 FSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLI 426

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
            E  +YF+ +   ++++P  EHYA MVDIL R+G   EA+ L+  M  +P+E +W ++++
Sbjct: 427 RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLS 486

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CR+H NLE  ++  + LF+M+   +   YV MSNIYA AG W+   +V+K ++ +G++K
Sbjct: 487 ACRVHGNLEIGREVGEILFRMDT-DNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKK 545

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALHDEDEE 672
               SWVE+  ++H F   D+ HP T +I   ++ + + +K+E GY      ALHD +EE
Sbjct: 546 EAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEE 605

Query: 673 IKVESLKYHSERLAIAFALI---NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            K E+L+ HSE+LAI  AL+      +G  I V KNLR C DCH  IK +SKI  +   V
Sbjct: 606 SKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVV 665

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD++RFH F+DG CSC D+W
Sbjct: 666 RDANRFHRFEDGLCSCGDYW 685



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 248/462 (53%), Gaps = 11/462 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N LI  Y K   +  A  +F+ M++R  VSWT L+ GY Q+   + +  L  +M 
Sbjct: 38  DLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMG 97

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   P+  TF+T L  C         +Q+H   +K G+  + ++ N+ +D Y K   +
Sbjct: 98  YSG-VKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRI 156

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            +A +VF +MP ++ VS+NA+I G   EG   +++ LF  MQ  G  P +FTF + L A 
Sbjct: 157 GMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKAC 216

Query: 185 VGLADIALGRQVHAFVVKTNF---VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             L  I  G Q+HA ++   F   + N+ +A+A++DLY+K   + EA+K+F  + + + +
Sbjct: 217 GALGAIRGGTQIHASLITRGFPISIRNI-IASAIVDLYAKCGYLFEAQKVFDRIEQKNLI 275

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S++ +I  +A      E++ LFR+L+ +  +   F  S ++ V A+   ++ G+Q+H   
Sbjct: 276 SWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYI 335

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +   +  ++ VANS++DMY KCG  EEA+ +F+ +   + V WT MI+ Y + G  E+A+
Sbjct: 336 LKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAI 395

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDM 420
           +LF  M    I  D+  + ++L A +    +   ++  S +  +  M  N+   + ++D+
Sbjct: 396 HLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDI 455

Query: 421 YAKSGSLKDA---IQTFKEMPERNIVSWNALISACAQNGDAQ 459
             ++G LK+A   I+  K  P   I  W  L+SAC  +G+ +
Sbjct: 456 LGRAGQLKEAKNLIENMKLKPNEGI--WQTLLSACRVHGNLE 495



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 12/259 (4%)

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           +++   A +LR  ++      G Q+H+  +  GF  ++   + L+DMY K   +  A   
Sbjct: 2   SERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSV 61

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M ERN+VSW AL+    Q G+A+ +L    +M  SG +P+  +  + L AC   G++
Sbjct: 62  FDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           E G+Q  + M  K           + +D+  + G    AE++  +MPF  + + W+++I 
Sbjct: 122 ENGMQ-IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFR-NLVSWNAMIA 179

Query: 554 SCRIHKNLEFAKKAADQLFKME---KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
               H +    +K+     +M+   ++ D   + +        G     +Q+  ++  RG
Sbjct: 180 G---HTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236

Query: 611 ----VRKVTAYSWVELKSK 625
               +R + A + V+L +K
Sbjct: 237 FPISIRNIIASAIVDLYAK 255


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/642 (38%), Positives = 382/642 (59%), Gaps = 3/642 (0%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           + N L+  Y     +  A R+F  MP+ + VS+  L++G  +  ++ +A+  F  M   G
Sbjct: 55  LANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAG 114

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
             P+ F  ++A  A   LA    G Q+H   V+  F   +FVA+ L D+YSK   +VEA 
Sbjct: 115 LVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEAC 174

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF-DRSQFPFSTLLSVVANK 288
           ++F +MP+ D V++  MI  YA N   + ++  FR+++        Q    ++LS     
Sbjct: 175 RVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGL 234

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVPWTAM 347
            D  + R IH+  + +    EV V N+L DMYAK    + A  +   +   ++ V  T++
Sbjct: 235 KDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSL 294

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I  Y++   +E+AL +FIE+ R  +  ++ TF+S+++  A  A L  G QLH+ VI++  
Sbjct: 295 IDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL 354

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
           +S+ F  S LLDMY K G +  +IQ FKE+     ++WNA I+  AQ+G  +  +++F+ 
Sbjct: 355 ISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDR 414

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M  SG +P+ ++ +S+L+ACSH GL++EGL+YF SM   + + PK EHY+ ++D+  R+G
Sbjct: 415 MTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAG 474

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             DEAEK + +MP +P+   W S++ +CR+  N E  + AAD + K+E   +   +V++S
Sbjct: 475 RLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEP-DNTGVHVSLS 533

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
            IYA  GQWE V  V+K MR+  ++K+  +SWV+   K HVF + D  HPQ  +I  K+E
Sbjct: 534 GIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLE 593

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            L + +K+EGY PDT     + ++  K   L+YHSER+A+AFALI+ P   PI+V KNLR
Sbjct: 594 ELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLR 653

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            C DCH+A+K ISK+  R+I VRD+SRFHHF  G CSC D+W
Sbjct: 654 ICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 249/486 (51%), Gaps = 7/486 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N LI+ Y    ++ +A  LF++M     VSWT L+ G +Q +  R+A   F  M 
Sbjct: 52  STFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSM- 110

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P     ++     +     +   Q+H   ++ G+++ L + ++L D Y K   L
Sbjct: 111 CRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLL 170

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSA 183
             A RVF +MPQKD+V++ A+I G+AK G  E A+  F +M+  G   +D     + LSA
Sbjct: 171 VEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA 230

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-HDCVVEARKLFGEMPEVDGVS 242
             GL D  L R +H+ V+K+ F + V V NAL D+Y+K  D    AR +  +   ++ VS
Sbjct: 231 SGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVS 290

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              +I  Y   +  +++L +F EL+    + ++F FS+++   A +  L+ G Q+H + I
Sbjct: 291 ATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVI 350

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T+ IS+  V+++L+DMY KCG    + ++F  + + + + W A I+   Q G+  EA+ 
Sbjct: 351 KTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIR 410

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMY 421
            F  M  + I  +  TF S+L A +    +  G K  +S     G        S ++DMY
Sbjct: 411 AFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMY 470

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
            ++G L +A +   EMP + N   W +L+ AC   G+ +    + ++M++   +PD+  +
Sbjct: 471 GRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMK--LEPDNTGV 528

Query: 481 LSVLSA 486
              LS 
Sbjct: 529 HVSLSG 534



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 19/243 (7%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTA---VSWTILIGGYSQKNQFREAFKLF 60
           Q     N L   Y K+ ++  A  +    +D+ +   VS T LI GY + +   +A  +F
Sbjct: 254 QEVAVRNALTDMYAKAADMDNAARVVK--IDQGSLNVVSATSLIDGYIETDCIEKALLMF 311

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +++R  G  +P+  TF++++ GC+      +  Q+HA++IK    S   + ++L+D Y K
Sbjct: 312 IELRRQG-VEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              + L+ ++FKE+     +++NA I   A+ G   EAI+ F  M   G +P+  TF + 
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 181 LSA--GVGLADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           L+A    GL D  L      +  H    K          + ++D+Y +   + EA K  G
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHY------SCIIDMYGRAGRLDEAEKFIG 484

Query: 234 EMP 236
           EMP
Sbjct: 485 EMP 487



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 373 SADQAT---FASILRASAELASLSLGKQLHSFVIRSG-FMSNVFSGSALLDMYAKSGSLK 428
           S D AT    A+ L++      L LG+ LH+ ++ SG   ++ F  + L+ MY+    + 
Sbjct: 11  SLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVP 70

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A++ F  MP  N+VSW  L+S   QN   +  L +F  M ++G  P   +L S   A +
Sbjct: 71  SAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAA 130

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
                  G Q  + +  +     +    +++ D+  +SG   EA ++  QMP + D + W
Sbjct: 131 ALAARHAGAQ-LHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP-QKDAVAW 188

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           +++I+    + NLE A  A   + + E L  A  +V  S + A  G
Sbjct: 189 TAMIDGYAKNGNLEAAVIAFRDM-RREGLVGADQHVLCSVLSASGG 233


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/766 (34%), Positives = 404/766 (52%), Gaps = 112/766 (14%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ------------------ 136
           VHA I+  G+    +I N L+D YCK   +  AR +F ++P+                  
Sbjct: 18  VHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGN 77

Query: 137 ---------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                          +D+VS+NA+IT F+       A++LFV+M+ LGF P  FTF++ L
Sbjct: 78  IKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVL 137

Query: 182 SAGVGLADIALG-RQVHAFVVKTNFVENVFVANALLDLYSK-------HDCVV--EARKL 231
            A   +AD     +Q+H  V K   +    V NAL+  Y         + CV+   ARKL
Sbjct: 138 GALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKL 197

Query: 232 FGEMPE---------------------------VDG------VSYNVMITCYAWNEQYKE 258
           F E P                            ++G      V++N MI+ Y     Y+E
Sbjct: 198 FDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEE 257

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE----VKVAN 314
           +  L R +        ++ +++++S  +N     IGRQ+H   + T         + V N
Sbjct: 258 AFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317

Query: 315 SLVDMYAKCG-------------------------------RFEEAKEIFANLSHISTVP 343
           +L+ +Y +CG                               R EEA  IF  +   S + 
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WT MIS   Q G  EE L LF +M    +      +A  + + + L SL  G+QLHS +I
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII 437

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           + G  S++  G+AL+ MY++ G ++ A   F  MP  + VSWNA+I+A AQ+G     ++
Sbjct: 438 QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQ 497

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            +E M++    PD ++ L++LSACSH GL++EG  YF++M   Y + P+++HY+ ++D+L
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLL 557

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
           CR+G F EA+ +   MPFEP   +W +++  C IH N+E   +AAD+L ++   +D   Y
Sbjct: 558 CRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGT-Y 616

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
           +++SN+YA  GQW+ V++V+K MRERGV+K    SW+E+++ VHVF  +D +HP+ + + 
Sbjct: 617 ISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVY 676

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
           R +E L+ EM+K GY PDT   LHD + E K  +L  HSE+LA+ + ++  P G+ I V 
Sbjct: 677 RYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVF 736

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C DCH A K ISK+  REI VRD  RFHHF++G CSC ++W
Sbjct: 737 KNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 265/563 (47%), Gaps = 91/563 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFK 58
           +P  + V+   ++S Y  +GN+  A +LFN+  M  R  VS+  +I  +S  +    A +
Sbjct: 57  IPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQ 116

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           LFV M+  G   PD  TF+++L   S   D      Q+H ++ K+G  S+  + N+L+  
Sbjct: 117 LFVQMKRLGFV-PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMS- 174

Query: 118 YCKIRC-----------LDLARRVFKEMP--QKD-------------------------- 138
            C + C           +  AR++F E P  ++D                          
Sbjct: 175 -CYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEG 233

Query: 139 -----SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
                +V++NA+I+G+   G  EEA  L   M  LG +  ++T+ + +SA        +G
Sbjct: 234 MTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG 293

Query: 194 RQVHAFVVKT------NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--- 244
           RQVHA+V++T      +FV  + V NAL+ LY++   +VEAR++F +MP  D VS+N   
Sbjct: 294 RQVHAYVLRTVVQPSGHFV--LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAIL 351

Query: 245 ----------------------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
                                       VMI+  A N   +E LKLF +++    +   +
Sbjct: 352 SGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDY 411

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++  ++  +    L  G+Q+H+Q I     S + V N+L+ MY++CG  E A  +F  +
Sbjct: 412 AYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM 471

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
            ++ +V W AMI+A  Q G+  +A+ L+ +M + +I  D+ TF +IL A +    +  G+
Sbjct: 472 PYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGR 531

Query: 397 Q-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQ 454
               +  +  G        S L+D+  ++G   +A    + MP E     W AL++ C  
Sbjct: 532 HYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWI 591

Query: 455 NGDAQATLKSFEDMVQSGYQPDS 477
           +G+ +  +++ + +++   Q D 
Sbjct: 592 HGNMELGIQAADRLLELMPQQDG 614



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 218/519 (42%), Gaps = 113/519 (21%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-------- 238
           L+  +  R VHA ++ + F     + N L+D Y K   +  AR LF ++P+         
Sbjct: 9   LSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTM 68

Query: 239 -------------------------DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
                                    D VSYN MIT ++ +     +L+LF +++   F  
Sbjct: 69  LSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVP 128

Query: 274 SQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKC--------- 323
             F FS++L  ++   D +   +Q+H +     A+S   V N+L+  Y  C         
Sbjct: 129 DPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSC 188

Query: 324 ---------------GRFEE------------------AKEIFANLSHISTVPWTAMISA 350
                          GR +E                  A+E+   ++    V W AMIS 
Sbjct: 189 VLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISG 248

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           YV +G  EEA +L   M    I  D+ T+ S++ A++     ++G+Q+H++V+R+    +
Sbjct: 249 YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPS 308

Query: 411 ---VFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC-------------- 452
              V S  +AL+ +Y + G L +A + F +MP +++VSWNA++S C              
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFR 368

Query: 453 -----------------AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
                            AQNG  +  LK F  M   G +P   +    +++CS  G ++ 
Sbjct: 369 EMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDN 428

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G Q  + + Q           A ++ +  R G  + A+ +   MP+  D + W+++I + 
Sbjct: 429 GQQLHSQIIQLGHDSSLSVGNA-LITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAAL 486

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
             H +   A +  +++ K + L D   ++ + +  + AG
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAG 525



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 119/304 (39%), Gaps = 61/304 (20%)

Query: 384 RASAELASLSLGKQLHSFVIRSGF-------------------------------MSNVF 412
           R  A+L+  S  + +H+ ++ SGF                                 ++ 
Sbjct: 4   RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           + + +L  Y+ +G++K A Q F   P   R+ VS+NA+I+A + + D  A L+ F  M +
Sbjct: 64  AATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKR 123

Query: 471 SGYQPDSVSLLSVLSACS------------HCGLIEEGL----QYFNSMTQKYKLRPKKE 514
            G+ PD  +  SVL A S            HC + + G        N++   Y       
Sbjct: 124 LGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
              S V +      FDEA       P   DE  W+++I     + +L     AA +L + 
Sbjct: 184 LVNSCVLMAAARKLFDEAP------PGRRDEPAWTTIIAGYVRNDDL----VAARELLEG 233

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFTAN 632
                A  + AM + Y   G +E    + + M   G++  + T  S +   S   +F   
Sbjct: 234 MTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG 293

Query: 633 DELH 636
            ++H
Sbjct: 294 RQVH 297


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/697 (36%), Positives = 405/697 (58%), Gaps = 4/697 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y +  +L  AR +F  M +R +VSW  LI GY     + +A  ++   R  G  
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T +++L  C       E + VH  I K G    +II N L+  Y K   L  ARR
Sbjct: 220 -PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KDSV++N +I G+A+ G +E ++KLF++M   GF P   +  + + A     D
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G+ VH +++ + F  +    N L+D+Y+K   ++ A+++F      D V++N +I  
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  +  YKE L+ F+ ++  R   S   F  LLS+ +   D+  GR IH   I     +E
Sbjct: 398 YTQSGYYKEGLESFKMMKMERKPDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAE 456

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + + NSL+D+YAKCG  ++  ++F+ +S    + W  +I++ V   +      +  EM  
Sbjct: 457 LIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D+AT   IL   + LA    GK++H ++ +SGF SNV  G+AL++MY+K GSL++
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLEN 576

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            I+ FK M E+++V+W ALISA    G+ +  LK+F+DM  SG  PDSV+ ++ + ACSH
Sbjct: 577 CIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH 636

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G+++EGL++F+ M   Y L P+ EHYA +VD+L RSG   +AE+ +  MP +PD  +W 
Sbjct: 637 SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR   N   A++ + ++ ++    D   YV +SNIYA  G+W+ V  V+ +M+ +
Sbjct: 697 ALLSACRARGNTNIAQRVSKKILELNS-DDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SW+E++ +V+VF   D+   Q ++++  +E L++ M KEGY  D   ALHD 
Sbjct: 756 GLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDV 815

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           +E+ K + L  HSERLAIAF L+NT  GSP+L+   L
Sbjct: 816 EEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 245/479 (51%), Gaps = 5/479 (1%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM-P 135
           ++LL   S      +L  VH+ II  G +  +I    L+  Y +++    +  VF+ + P
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             +   +N++I      GL  +A+  + EM+    +P  FTF + +++   + D+ LG  
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH   ++  F  ++++ NAL+D+YS+   +  AR +F EM   D VS+N +I+ Y  N  
Sbjct: 143 VHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           ++++L ++ + + T      F  S++L    + + ++ G  +H          +V + N 
Sbjct: 203 WEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ MY K  R  EA+ +F+ ++   +V W  MI  Y Q G  E ++ LF++M    +  D
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PD 321

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             +  S +RA  +   L +GK +H ++I SGF  +  + + L+DMYAK G L  A + F 
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
               ++ V+WN+LI+   Q+G  +  L+SF+ M++   +PDSV+ + +LS  S    I +
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQ 440

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           G +  +    K+    +     S++D+  + G  D+  K+ + M    D I W++VI S
Sbjct: 441 G-RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIAS 497



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 202/407 (49%), Gaps = 21/407 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS-YNVMITCYAW 252
           R VH+ ++ +    +V  +  L+  Y++    + +  +F  +   + V  +N +I     
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N  + ++L  + E++  +     F F ++++  A  LDL++G  +H   +     S++ +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+DMY++    + A+ +F  +S+  +V W ++IS Y   G  E+AL+++ +     +
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D  T +S+L A   L ++  G  +H  + + G   +V  G+ LL MY K   L++A +
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F +M  ++ V+WN +I   AQ G  +A++K F DM+  G+ PD +S+ S + AC   G 
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILC--RSGCFDEAEKLMAQMPFEP----DEI 546
           ++ G         KY +    E      +IL    + C D    L AQ  F+     D +
Sbjct: 338 LQVG-----KFVHKYLIGSGFECDTVACNILIDMYAKCGD---LLAAQEVFDTTKCKDSV 389

Query: 547 MWSSVINSCRIHKNLEFAKKAAD--QLFKMEKLRDAAPYVAMSNIYA 591
            W+S+IN    +    + K+  +  ++ KME+  D+  +V + +I++
Sbjct: 390 TWNSLING---YTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFS 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 178/354 (50%), Gaps = 4/354 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV+ N+LI  Y K G+L  A+E+F++   + +V+W  LI GY+Q   ++E  + F  M+
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK 415

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +    PD VTF  LLS  S+    N+   +H D+IKFG+ + LII NSL+D Y K   +
Sbjct: 416 ME--RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEM 473

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D   +VF  M   D +S+N +I             ++  EM+  G  P + T    L   
Sbjct: 474 DDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA    G+++H ++ K+ F  NV + NAL+++YSK   +    K+F  M E D V++ 
Sbjct: 534 SLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWT 593

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ +    + K++LK F++++ +        F   +   ++   ++ G +   +    
Sbjct: 594 ALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTD 653

Query: 305 TAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGN 356
             +   ++    +VD+ A+ G   +A+E   ++        W A++SA   +GN
Sbjct: 654 YNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGN 707



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 170/406 (41%), Gaps = 65/406 (16%)

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           +F  S+LL  +++  +    R +H+  I +     V  +  L+  YA+      +  +F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 335 NLSHISTV-PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           ++S  + V  W ++I A    G   +AL  + EM    +  D  TF S++ + A +  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LG  +H   +  GF S+++ G+AL+DMY++   L +A   F+EM  R+ VSWN+LIS   
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF------------- 500
            NG  +  L  +     +G  PD  ++ SVL AC     ++EG+                
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258

Query: 501 --NSMTQKY----KLRPKKEHYASMV--------DILC---RSGCFDEAEKLMAQM--PF 541
             N +   Y    +LR  +  ++ M          ++C   + G  + + KL   M   F
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGF 318

Query: 542 EPDEIMWSSVINSCRIHKNLEFAK-------------------------------KAADQ 570
            PD +  +S I +C    +L+  K                                AA +
Sbjct: 319 VPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQE 378

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQW-ESVSQVKKAMRERGVRKVT 615
           +F   K +D+  + ++ N Y  +G + E +   K    ER    VT
Sbjct: 379 VFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVT 424


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/748 (36%), Positives = 427/748 (57%), Gaps = 15/748 (2%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+S + + G    A+++F S+  + AV+   LI G  +++   EA K+FV  R     + 
Sbjct: 316  LVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNA 375

Query: 72   DYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILI-ICNSLVDSYCKIRCLDL 126
            D  T+  LLS  +E   + E ++    VH  +++ G   + I + N LV+ Y K   ++ 
Sbjct: 376  D--TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIES 433

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            A ++F+ M   D +S+N +I+   + G  EEA+  +  M+     PS+F   ++LS+  G
Sbjct: 434  ASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAG 493

Query: 187  LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            L  +  G+QVH   VK     +  V+N L+ +Y +   + +  K+F  M E D VS+N M
Sbjct: 494  LKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTM 553

Query: 247  ITCYAWNEQ-YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            +   A ++    E +K+F  +       ++  F  LL+ ++    L++G+Q+H   +   
Sbjct: 554  MGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHG 613

Query: 306  AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLF 364
             + +  V N+L+  YAK G     + +F N+S     + W +MIS Y+  GNL+EA++  
Sbjct: 614  VMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCV 673

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
              M  +    D  TF+ IL A A +A+L  G +LH+F IRS   S+V   SAL+DMY+K 
Sbjct: 674  WLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKC 733

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            G +  A + F  M +RN  SWN++IS  A++G  +  ++ FE+M++S   PD V+ +SVL
Sbjct: 734  GRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVL 793

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            SACSH GL+E GL+YF  M   + + P+ EHY+ ++D+L R+G  D+ ++ + +MP EP+
Sbjct: 794  SACSHAGLVERGLEYF-EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPN 852

Query: 545  EIMWSSVINSCRIHK---NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             ++W +V+ +CR  K   N++  ++A+  L ++E  ++   YV  SN +A  G WE  ++
Sbjct: 853  ALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEP-QNPVNYVLASNFHAATGMWEDTAK 911

Query: 602  VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
             + AMR+   +K    SWV L   VH F A D  HP T EI  K+  L+Q ++  GY P 
Sbjct: 912  ARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPL 971

Query: 662  TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            T  AL+D +EE K E L YHSE+LAIAF L  +  G PI +MKNLR C DCH A + IS+
Sbjct: 972  TEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSG-PIRIMKNLRVCGDCHIAFRYISQ 1030

Query: 722  ITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +  R+I +RDS RFHHFKDG CSC D+W
Sbjct: 1031 MISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 312/622 (50%), Gaps = 27/622 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +    N L++ Y K   LA A ++F+ M +R AVSWT L+ GY       EAF++F  
Sbjct: 93  NHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRA 152

Query: 63  M--RTDGGSDPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           M      G  P   TF TLL  C +  PD     +QVH  + K  Y S   +CN+L+  Y
Sbjct: 153 MLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMY 212

Query: 119 --CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ----HLGFKP 172
             C +    LA+RVF   P +D +++NAL++ +AK+G       LF +MQ     +  +P
Sbjct: 213 GSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRP 272

Query: 173 SDFTFAAALS-AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           ++ TF + ++ A +     A+  QV  +V+K+    +++V +AL+  +++H    EA+ +
Sbjct: 273 TEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDI 332

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA----N 287
           F  + + + V+ N +I      +  +E++K+F   + T  D +   +  LLS +A    +
Sbjct: 333 FLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSIS 391

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +  L+IGR +H   ++ T ++++K+A  N LV+MYAKCG  E A +IF  +     + W 
Sbjct: 392 EEGLRIGRVVHGH-MLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWN 450

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            +ISA  Q GN EEA+  +  M ++ IS       S L + A L  L+ G+Q+H   ++ 
Sbjct: 451 TIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW 510

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA-QATLKS 464
           G   +    + L+ MY + G++ D  + F  M E + VSWN ++   A +       +K 
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M++ G  P+ V+ +++L+A S   ++E G Q  ++   K+ +        +++    
Sbjct: 571 FNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ-VHAAVMKHGVMEDNVVDNALISCYA 629

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           +SG     E L   M    D I W+S+I+    + NL+ A      +    ++ D   + 
Sbjct: 630 KSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFS 689

Query: 585 AMSNIYAVAGQWESVSQVKKAM 606
            + N  A      SV+ +++ M
Sbjct: 690 IILNACA------SVAALERGM 705



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 247/496 (49%), Gaps = 24/496 (4%)

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           A LL        AN    +H ++IK G N  L +CN LV+SY K   L  A +VF EMP+
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQ---HLGFKPSDFTFAAALSA--GVGLADIA 191
           +++VS+  L++G+   G+ EEA ++F  M      G +P+ FTF   L A    G   + 
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG 184

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE----ARKLFGEMPEVDGVSYNVMI 247
              QVH  V KT +  N  V NAL+ +Y    C V     A+++F   P  D +++N ++
Sbjct: 185 FAVQVHGLVSKTEYASNTTVCNALISMYGS--CTVGPPILAQRVFDGTPIRDLITWNALM 242

Query: 248 TCYAWNEQYKESLKLFRELQ----FTRFDRSQFPFSTLLS-VVANKLDLQIGRQIHTQTI 302
           + YA       +  LF+++Q      +   ++  F +L++    +     +  Q+    +
Sbjct: 243 SVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVL 302

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +   S++ V ++LV  +A+ G  +EAK+IF +L   + V    +I   V++   EEA+ 
Sbjct: 303 KSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVK 362

Query: 363 LFIEMCRANISADQATFASILRASAELA----SLSLGKQLHSFVIRSGFMS-NVFSGSAL 417
           +F+   R  +  +  T+  +L A AE +     L +G+ +H  ++R+G     +   + L
Sbjct: 363 IFVGT-RNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGL 421

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           ++MYAK G+++ A + F+ M   + +SWN +ISA  QNG+ +  +  +  M QS   P +
Sbjct: 422 VNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSN 481

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            +L+S LS+C+   L+  G Q  +    K+ L         +V +    G   +  K+  
Sbjct: 482 FALISSLSSCAGLKLLTAG-QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540

Query: 538 QMPFEPDEIMWSSVIN 553
            M  E DE+ W++++ 
Sbjct: 541 SMA-EHDEVSWNTMMG 555



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 32/201 (15%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G +  A +LFNSM  R   SW  +I GY++    R+A ++F +M 
Sbjct: 719 DVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEML 778

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN----SLVDSY-C 119
               S PD+VTF ++LS CS           HA +++ G     ++ +      ++ Y C
Sbjct: 779 RSRES-PDHVTFVSVLSACS-----------HAGLVERGLEYFEMMPDHGILPQIEHYSC 826

Query: 120 KIRCLDLARRV--FKEMPQKDSVSFNALI-------TGFAKEG----LNEEAIKLFVEMQ 166
            I  L  A ++   KE  Q+  +  NALI          +K+G    L  EA ++ +E++
Sbjct: 827 VIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIE 886

Query: 167 HLGFKPSDFTFAAALSAGVGL 187
                P ++  A+   A  G+
Sbjct: 887 PQ--NPVNYVLASNFHAATGM 905


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/743 (35%), Positives = 425/743 (57%), Gaps = 7/743 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           +TN+L++ YVK+G    A  LF+ M +R  VS+  L  GY+     ++   L+  +  +G
Sbjct: 86  ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                +V F + L      D A     +H+ I+K GY+S   +  +L+++Y     +D A
Sbjct: 142 HELNPHV-FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF+ +  KD V +  +++ + + G  E+++KL   M+  GF P+++TF  AL A +GL
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                 + VH  ++KT +V +  V   LL LY++   + +A K+F EMP+ D V ++ MI
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +  N    E++ LF  ++      ++F  S++L+  A      +G Q+H   +     
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++ V+N+L+D+YAKC + + A ++FA LS  + V W  +I  Y   G   +A ++F E 
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +S  + TF+S L A A LAS+ LG Q+H   I++     V   ++L+DMYAK G +
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K A   F EM   ++ SWNALIS  + +G  +  L+  + M     +P+ ++ L VLS C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S+ GLI++G + F SM + + + P  EHY  MV +L RSG  D+A KL+  +P+EP  ++
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++     N EFA+++A+++ K+   +D A YV +SN+YA A QW +V+ ++K+M+
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINP-KDEATYVLVSNMYAGAKQWANVASIRKSMK 679

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           E GV+K    SW+E +  VH F+     HP    I   +E L  +  + GY PD +  L 
Sbjct: 680 EMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLL 739

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACTDCHAAIKLISKITGRE 726
           D D+E K + L  HSERLA+A+ L+  P   + IL+MKNLR C+DCH+A+K+IS I  R+
Sbjct: 740 DMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRD 799

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + +RD +RFHHF  G CSC D W
Sbjct: 800 LVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 240/511 (46%), Gaps = 10/511 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   +  +L  C + +       +H DI+K G    L   N L+++Y K      A  +F
Sbjct: 48  DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EMP++++VSF  L  G+A     ++ I L+  +   G + +   F + L   V L    
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +   +H+ +VK  +  N FV  AL++ YS    V  AR +F  +   D V +  +++CY 
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N  +++SLKL   ++   F  + + F T L            + +H Q + T  + + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V   L+ +Y + G   +A ++F  +     VPW+ MI+ + Q G   EA++LFI M  A 
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T +SIL   A      LG+QLH  V++ GF  +++  +AL+D+YAK   +  A+
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F E+  +N VSWN +I      G+       F + +++      V+  S L AC+   
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++ G+Q  + +  K     K     S++D+  + G    A+ +  +M    D   W+++
Sbjct: 464 SMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNAL 521

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           I+    H       + A ++  + K RD  P
Sbjct: 522 ISGYSTHG----LGRQALRILDIMKDRDCKP 548


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/791 (34%), Positives = 434/791 (54%), Gaps = 51/791 (6%)

Query: 3   NQNTVSTNMLISGYVKSGNLAT------ARELF--NSMVDRTAVSWTILIGGYSQKNQFR 54
           N + +S   LIS   + G   +      A ELF  ++ +  T   ++ LI G+S      
Sbjct: 62  NHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGY 121

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           +A  +F  +   G   PD  TF  +LS C++     E  QVH  I+K G+   + + NSL
Sbjct: 122 KAIVVFRQLMCMGAV-PDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSL 180

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           +  Y +   +D  RRVF +M +++ VS+ +LI G+AK G  +EA+ LF EM  +G +P+ 
Sbjct: 181 IHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNS 240

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            T    +SA   L D+ LG QV   + +     N  + NAL+D+Y K   + +ARK+F E
Sbjct: 241 VTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDE 300

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVA--NKLD 290
             + + V YN +++ Y      +E L +  E+     R DR      T+LS V+  ++LD
Sbjct: 301 CVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRI-----TMLSAVSACSELD 355

Query: 291 -LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            +  G+  H   +         V N++++MY KCG+ E A  +F  + + + V W ++I+
Sbjct: 356 DVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIA 415

Query: 350 AYVQKGNLE-------------------------------EALNLFIEMCRANISADQAT 378
            +V+ G++E                               EA+ LF  M    I+AD+ T
Sbjct: 416 GFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVT 475

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
              +  A   L +L L K +H ++ +     ++  G+AL+DM+A+ G  + A+Q F +M 
Sbjct: 476 MVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMV 535

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +R++ +W A I A A  G+    ++ F++M+Q G +PD V  +++L+A SH GL+E+G  
Sbjct: 536 KRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWH 595

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            F SM   Y + P+  HY  MVD+L R+G   EA  L+  M  EP++++W S++ +CR+H
Sbjct: 596 IFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVH 655

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
           KN++ A  AA+++ +++  R    +V +SNIYA AG+W+ V++V+  ++E+G  K+   S
Sbjct: 656 KNVDIAAYAAERISELDPERTGI-HVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSS 714

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
            +E+  K+  FT  DE HP+   I   ++ +   ++  GY PD +  L D +E+ K   L
Sbjct: 715 SIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLL 774

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
             HSE+LAIAFALI+T +G PI V KNLR C+DCH+  KL+SK   REI VRD++RFH F
Sbjct: 775 SRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFF 834

Query: 739 KDGFCSCRDFW 749
           + GFCSC D+W
Sbjct: 835 QQGFCSCGDYW 845



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 265/566 (46%), Gaps = 53/566 (9%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLARRVFKEMPQKDSV---- 140
           T  EL Q+H+ I K G N   +   +L+ S  ++     L+ A++  +   + + +    
Sbjct: 45  TMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTH 104

Query: 141 -SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
             F++LI GF+  GL  +AI +F ++  +G  P +FTF   LSA    A +  G QVH  
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           +VK  F  ++FV N+L+  Y +   +   R++F +M E + VS+  +I  YA    YKE+
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEA 224

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV------A 313
           + LF E+       +      ++S  A   DLQ+G Q      V T I E+++       
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQ------VCTCIGELELEVNALMV 278

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+LVDMY KCG  ++A++IF      + V +  ++S YV++G   E L +  EM +    
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D+ T  S + A +EL  +S GK  H +V+R+G        +A+++MY K G  + A + 
Sbjct: 339 PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS---------------------- 471
           F  M  +  VSWN+LI+   +NGD ++  K F  M  S                      
Sbjct: 399 FDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAI 458

Query: 472 ---------GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
                    G   D V+++ V SAC + G ++   ++ +   +K  +        ++VD+
Sbjct: 459 ELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHGYIKKKDIHFDMHLGTALVDM 517

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             R G    A ++  +M  + D   W++ I +  +  N   A +  D++ +     D   
Sbjct: 518 FARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVV 576

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRE 608
           +VA+    +  G  E    + ++M++
Sbjct: 577 FVALLTALSHGGLVEQGWHIFRSMKD 602



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 5/185 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+  VS N LI+G+V++G++ +A ++F++M D   VSW  +IG   Q++ F+EA +LF
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+++G +  D VT   + S C      +    +H  I K   +  + +  +LVD +  
Sbjct: 462 RVMQSEGIT-ADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFA- 519

Query: 121 IRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            RC D   A +VF +M ++D  ++ A I   A EG    AI+LF EM   G KP    F 
Sbjct: 520 -RCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFV 578

Query: 179 AALSA 183
           A L+A
Sbjct: 579 ALLTA 583


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/688 (36%), Positives = 398/688 (57%), Gaps = 18/688 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL   +   +    +Q+HA ++K G+ S  ++ N+L+D Y K   L +A  VF  MP
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ VS+ AL+ GF   G   E ++LF EM+  G  P++FT +A L A  G      G Q
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQ 124

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   V+T F  +  VAN+L+ +YSK     +AR++F  +P  +  ++N MI+ YA   Q
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 256 YKESLKLFRELQFTRFDRS--QFPFSTLLSVVANKLDLQIGRQIHTQTIV--TTAISEVK 311
            ++SL +FRE+Q  R D    +F F++LL   +     + G Q+H    V   +  S   
Sbjct: 185 GRDSLLVFREMQ-RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A +L+D+Y KC R   A ++F  L   + + WT +I  + Q+G ++EA+ LF     + 
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           + AD    +S++   A+ A +  GKQ+H +  ++    +V   ++L+DMY K G   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+EMP RN+VSW A+I+   ++G  +  +  FE+M   G + D V+ L++LSACSH G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++E  +YF+ + Q  ++RPK EHYA MVD+L R+G   EA++L+  MP EP   +W ++
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+HK++   ++  D L  ++   +   YV +SNI A AG+W     ++ AMR +G+
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDG-DNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 542

Query: 612 RKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALHDE 669
           RK    SW E+  +VH F    D+ HPQ  +IRR +  +   M++  GY  D  CALHD 
Sbjct: 543 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 602

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSP--------ILVMKNLRACTDCHAAIKLISK 721
           DEE +VESL+ HSERLA+   L+    G          + V KNLR C DCH  +K +S 
Sbjct: 603 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 662

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  R + VRD++RFH F++G CSCRD+W
Sbjct: 663 VVRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 237/460 (51%), Gaps = 8/460 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  Y K G L  A E+F+ M +R  VSWT L+ G+    + RE  +LF +
Sbjct: 36  GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 95

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G S P+  T +  L  C     A   +Q+H   ++ G+    ++ NSLV  Y K R
Sbjct: 96  MRGSGTS-PNEFTLSATLKACGGGTRAG--VQIHGVCVRTGFEGHDVVANSLVVMYSKGR 152

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAAL 181
               ARRVF  +P ++  ++N++I+G+A  G   +++ +F EMQ     +P +FTFA+ L
Sbjct: 153 WTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 212

Query: 182 SAGVGLADIALGRQVHA--FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A  GL     G QVHA   V   +   N  +A ALLD+Y K   +  A ++F  +   +
Sbjct: 213 KACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRN 272

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            + +  +I  +A   Q KE++ LFR    +         S++++V A+   ++ G+Q+H 
Sbjct: 273 AIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHC 332

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            T  T A  +V VANSLVDMY KCG   EA   F  +   + V WTAMI+   + G+  E
Sbjct: 333 YTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGRE 392

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LL 418
           A++LF EM    + AD+  + ++L A +    +   ++  S + +   M       A ++
Sbjct: 393 AIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMV 452

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           D+  ++G L++A +    MP E  +  W  L+SAC  + D
Sbjct: 453 DLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKD 492



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  N +    L+  YVK   L  A ++F+ +  R A+ WT +I G++Q+ Q +EA  LF 
Sbjct: 238 PASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR 297

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              + G     +V  +++++  ++     +  QVH    K      + + NSLVD Y K 
Sbjct: 298 RFWSSGVRADGHV-LSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 356

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                A R F+EMP ++ VS+ A+I G  K G   EAI LF EMQ  G +  +  + A L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 416

Query: 182 SA 183
           SA
Sbjct: 417 SA 418


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/761 (34%), Positives = 426/761 (55%), Gaps = 18/761 (2%)

Query: 2   PNQNTVSTNMLISGYVK--SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           P+ +    N L++ Y +  +G+   AR L + M  R AVS+ +LI  YS+  Q  E+ + 
Sbjct: 41  PSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLET 100

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F+          D  T+A  L+ CS      E   VHA  +  G    + + NSLV  Y 
Sbjct: 101 FLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMY- 159

Query: 120 KIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
             RC D+  ARRVF    ++D VS+N+L++G+ + G +EE +++F  M+      + F  
Sbjct: 160 -ARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFAL 218

Query: 178 AAAL---SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            + +   S G G     +   VH  VVK     ++F+A+A++D+Y+K   + EA  LF  
Sbjct: 219 GSVIKCCSGGDGSVR-GIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKS 277

Query: 235 MPEVDGVSYNVMITCYAWNEQ------YKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           + + + V +N MI     +E        +E+L L+ ELQ    + ++F FS+++      
Sbjct: 278 VLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLA 337

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            D++ G+QIH Q +      +  + ++L+D+Y      E+    F ++     V WTAMI
Sbjct: 338 GDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMI 397

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           S  VQ    E AL LF E+    +  D  T +S++ A A LA +  G+Q+  F  +SGF 
Sbjct: 398 SGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFD 457

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
                G++ + MYA+SG+++ AIQ F+EM   ++VSW+A+IS+ AQ+G A+  L+ F +M
Sbjct: 458 RFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEM 517

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           V +   P+ ++ L VL+ACSH GL++EGL+Y+  M  +Y L P  +H   +VD+L R+G 
Sbjct: 518 VGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGR 577

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
             +AE  +    F  + ++W S++ SCRIH+++E  +  AD++ +++    +  YV + N
Sbjct: 578 LADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPA-SSGCYVNLYN 636

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           +Y  AG+    S+++  M+ERGV+K    SW+EL+S +H F A D+ HP+ N I  K+  
Sbjct: 637 MYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAE 696

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           ++ ++ K     DTSC    E    +   +  HSE+LA+A  +I+ P+ +PI VMKNLR 
Sbjct: 697 MLSKIDKL-TTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRV 755

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH+ +KLISK   REI +RD  RFHHF+DG CSC D+W
Sbjct: 756 CRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 253/475 (53%), Gaps = 21/475 (4%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKE 152
           VH  I +   +  L + N+L+ +YC++   D   ARR+  EMP++++VSFN LI  +++ 
Sbjct: 32  VHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRA 91

Query: 153 GLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           G  EE+++ F+        K   FT+AAAL+A      +  G+ VHA  V     E VFV
Sbjct: 92  GQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFV 151

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           +N+L+ +Y++   + EAR++F    E D VS+N +++ Y     ++E L++F  ++    
Sbjct: 152 SNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAM 211

Query: 272 DRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             + F   +++   +        I   +H   +     +++ +A+++VDMYAK G   EA
Sbjct: 212 GLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEA 271

Query: 330 KEIFANLSHISTVPWTAMIS------AYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
             +F ++   + V + AMI+      A V K  + EAL+L+ E+    +   + TF+S++
Sbjct: 272 VALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVI 331

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           RA      +  GKQ+H  V++  F  + F GSAL+D+Y  S  ++D  + F+ +P++++V
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVV 391

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +W A+IS C QN   +  L  F +++  G +PD  ++ SV++AC+   ++  G Q     
Sbjct: 392 TWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQ----- 446

Query: 504 TQKYKLRPKKEHYASM----VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            Q +  +   + + +M    + +  RSG  + A +   +M    D + WS++I+S
Sbjct: 447 MQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEME-SHDVVSWSAIISS 500


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/742 (34%), Positives = 412/742 (55%), Gaps = 4/742 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ +     +  A  LF+ M +R  +SW  +I  YS +  + + F +  DMR  G  
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR-HGEV 242

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T  +L+S C+  D       +H+  +  G +  + + N+LV+ Y     LD A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLA 188
           +F+ M ++D +S+N +I+ + +     EA++   ++ Q     P+  TF++AL A     
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +HA +++ +    + + N+LL +YSK + + +  ++F  MP  D VS NV+  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQTIVTTAI 307
            YA  E    ++++F  ++ T    +      L     +  DL   G  +H     T  +
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+  + NSL+ MYA CG  E +  IF+ +++ S + W A+I+A V+ G  EEA+ LF++ 
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
             A    D+   A  L +SA LASL  G QLH   +++G   +    +A +DMY K G +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
              ++T  +   R    WN LIS  A+ G  +    +F+ MV  G +PD V+ +++LSAC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GLI++G+ Y+NSM   + + P  +H   +VD+L R G F EAEK + +MP  P++++
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W S+++S R HKNL+  +KAA  L +++   D+A YV +SN+YA   +W  V +++  M+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSA-YVLLSNLYATNARWVDVDKLRSHMK 781

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
              + K  A SW++LK++V  F   D  H    +I  K++ ++ ++++ GY  DTS ALH
Sbjct: 782 TIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALH 841

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE K  +L  HSE+LA+A+ L+  PEGS I + KNLR C DCH   KL+S +  REI
Sbjct: 842 DTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREI 901

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD  RFH FK G CSC DFW
Sbjct: 902 VLRDPYRFHQFKHGSCSCSDFW 923



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 244/509 (47%), Gaps = 12/509 (2%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSE---PDT 88
           M  RT+ SW   + G ++      AF L   MR        +   A+L++ C      + 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGF-ALASLVTACEHRGWQEG 59

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
           A     +HA   + G    + I  +L+  Y     +  A+R+F EMPQ++ VS+ A++  
Sbjct: 60  AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            +  G  EEA+  +  M+  G   +    A  +S    L D   G QV A VV +  + +
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           V VAN+L+ ++     V +A +LF  M E D +S+N MI+ Y+  E Y +   +  +++ 
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                      +L+SV A+   + +G  IH+  + +     V + N+LV+MY+  G+ +E
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS-ADQATFASILRASA 387
           A+ +F N+S    + W  MIS+YVQ  +  EAL    ++ + +    +  TF+S L A +
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  G+ +H+ +++    + +  G++LL MY+K  S++D  + F+ MP  ++VS N 
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG-LIEEGLQYFNSMTQ- 505
           L    A   D    ++ F  M  +G +P+ ++++++   C   G L   G+     +TQ 
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479

Query: 506 -----KYKLRPKKEHYASMVDILCRSGCF 529
                +Y        YA+  D+   +G F
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIF 508



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 41/364 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + VS N+L  GY    ++A A  +F         SW                    
Sbjct: 409 MPCYDVVSCNVLTGGYAALEDVANAMRVF---------SW-------------------- 439

Query: 61  VDMRTDGGSDPDYVTFATLLSGC-SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             MR   G  P+Y+T   L   C S  D  +  + +HA + + G  S   I NSL+  Y 
Sbjct: 440 --MRGT-GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYA 496

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L+ +  +F  +  K  +S+NA+I    + G  EEAIKLF++ QH G K   F  A 
Sbjct: 497 TCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAE 556

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---SKHDCVVEARKLFGEMP 236
            LS+   LA +  G Q+H   VK     +  V NA +D+Y    K DC+++        P
Sbjct: 557 CLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRP 616

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
                 +N +I+ YA    +KE+   F+ +           F  LLS  ++   +  G  
Sbjct: 617 T---QCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673

Query: 297 IHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQK 354
            +     T  +S  +K    +VD+  + G+F EA++    +  + + + W +++S+    
Sbjct: 674 YYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTH 733

Query: 355 GNLE 358
            NL+
Sbjct: 734 KNLD 737


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/793 (34%), Positives = 427/793 (53%), Gaps = 56/793 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           T+ LIS Y+  G L+ A  L       D     W  LI  Y       +   LF  M + 
Sbjct: 62  TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
             + PD  TF  +   C E  +       HA  +  G+ S + + N+LV  Y + R L  
Sbjct: 122 SWT-PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGV 185
           AR+VF EM   D VS+N++I  +AK G  + A+++F  M +  G +P + T    L    
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L   +LG+Q+H F V +  ++N+FV N L+D+Y+K   + EA  +F  M   D VS+N 
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA------------------- 286
           M+  Y+   +++++++LF ++Q  +       +S  +S  A                   
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 287 ---NKLDL--------QIGRQIHTQTIVTTAI------------SEVKVANSLVDMYAKC 323
              N++ L         +G  +H + I   AI             E  V N L+DMYAKC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420

Query: 324 GRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEM----CRANISADQA 377
            + + A+ +F +LS      V WT MI  Y Q G+  +AL L  EM    C+   +A   
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA--F 478

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKE 436
           T +  L A A LA+L +GKQ+H++ +R+   +  +F  + L+DMYAK GS+ DA   F  
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M  +N V+W +L++    +G  +  L  F++M + G++ D V+LL VL ACSH G+I++G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           ++YFN M   + + P  EHYA +VD+L R+G  + A +L+ +MP EP  ++W + ++ CR
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IH  +E  + AA+++ ++    D + Y  +SN+YA AG+W+ V++++  MR +GV+K   
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGS-YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            SWVE       F   D+ HP   EI + + + MQ +K  GY P+T  ALHD D+E K +
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            L  HSE+LA+A+ ++ TP+G+ I + KNLR C DCH A   +S+I   +I +RDSSRFH
Sbjct: 778 LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFH 837

Query: 737 HFKDGFCSCRDFW 749
           HFK+G CSC+ +W
Sbjct: 838 HFKNGSCSCKGYW 850



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 248/541 (45%), Gaps = 61/541 (11%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS--VSFNAL 145
           T +++  +H  ++ FG  + L + + L+ +Y  + CL  A  + +  P  D+    +N+L
Sbjct: 40  TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I  +   G   + + LF  M  L + P ++TF     A   ++ +  G   HA  + T F
Sbjct: 99  IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
           + NVFV NAL+ +YS+   + +ARK+F EM   D VS+N +I  YA   + K +L++F  
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218

Query: 266 LQFTRFDRS-QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           +      R        +L   A+     +G+Q+H   + +  I  + V N LVDMYAKCG
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM----------------- 367
             +EA  +F+N+S    V W AM++ Y Q G  E+A+ LF +M                 
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338

Query: 368 --------------CR----ANISADQATFASILRASAELASLSLGKQLHSFVI------ 403
                         CR    + I  ++ T  S+L   A + +L  GK++H + I      
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398

Query: 404 -RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQA 460
            ++G        + L+DMYAK   +  A   F  +   ER++V+W  +I   +Q+GDA  
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458

Query: 461 TLKSFEDMVQSGYQ--PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA- 517
            L+   +M +   Q  P++ ++   L AC+    +  G Q        Y LR ++     
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ-----IHAYALRNQQNAVPL 513

Query: 518 ----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
                ++D+  + G   +A  +   M    +E+ W+S++    +H   E A    D++ +
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572

Query: 574 M 574
           +
Sbjct: 573 I 573



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 248/543 (45%), Gaps = 72/543 (13%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L++ Y +  +L+ AR++F+ M     VSW  +I  Y++  + + A ++F  M 
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD +T   +L  C+   T +   Q+H   +       + + N LVD Y K   +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----------------- 167
           D A  VF  M  KD VS+NA++ G+++ G  E+A++LF +MQ                  
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340

Query: 168 ------------------LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV-------K 202
                              G KP++ T  + LS    +  +  G+++H + +       K
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKESL 260
               +   V N L+D+Y+K   V  AR +F  +   E D V++ VMI  Y+ +    ++L
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460

Query: 261 KLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLV 317
           +L  E+  +  +   + F  S  L   A+   L+IG+QIH   +     +  + V+N L+
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMYAKCG   +A+ +F N+   + V WT++++ Y   G  EEAL +F EM R     D  
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGF-----MSNVFSGS-------ALLDMYAKSG 425
           T   +L A +           HS +I  G      M  VF  S        L+D+  ++G
Sbjct: 581 TLLVVLYACS-----------HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD-SVSLLSV 483
            L  A++  +EMP E   V W A +S C  +G  +    + E + +     D S +LLS 
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689

Query: 484 LSA 486
           L A
Sbjct: 690 LYA 692



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 21/377 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M  ++ VS N +++GY + G    A  LF  M    +    V+W+  I GY+Q+    EA
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-------GYNSILI 109
             +   M + G   P+ VT  ++LSGC+         ++H   IK+       G+    +
Sbjct: 350 LGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEM-- 165
           + N L+D Y K + +D AR +F  +   ++D V++  +I G+++ G   +A++L  EM  
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHD 223
           +    +P+ FT + AL A   LA + +G+Q+HA+ ++   N V  +FV+N L+D+Y+K  
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCG 527

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            + +AR +F  M   + V++  ++T Y  +   +E+L +F E++   F         +L 
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HIST 341
             ++   +  G +   +      +S      + LVD+  + GR   A  +   +      
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647

Query: 342 VPWTAMISAYVQKGNLE 358
           V W A +S     G +E
Sbjct: 648 VVWVAFLSCCRIHGKVE 664



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 10/348 (2%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYV 352
           + IH Q +++  I  + + + L+  Y   G    A  +      S      W ++I +Y 
Sbjct: 45  KLIH-QKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G   + L LF  M   + + D  TF  + +A  E++S+  G+  H+  + +GF+SNVF
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS- 471
            G+AL+ MY++  SL DA + F EM   ++VSWN++I + A+ G  +  L+ F  M    
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +PD+++L++VL  C+  G    G Q  +      ++         +VD+  + G  DE
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR-DAAPYVAMSNIY 590
           A  + + M  + D + W++++         E A +  +++ + EK++ D   + A  + Y
Sbjct: 283 ANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKM-QEEKIKMDVVTWSAAISGY 340

Query: 591 AVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFTANDELH 636
           A  G       V + M   G++  +VT  S +   + V       E+H
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/750 (34%), Positives = 409/750 (54%), Gaps = 62/750 (8%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFN--SMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           Q T S++  I+ Y ++G L  AR++F+   +  RT  SW  ++  Y +  Q REA  LF 
Sbjct: 20  QCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFE 79

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M       P   T +                                  N L+  + K 
Sbjct: 80  KM-------PQRNTVSW---------------------------------NGLISGHIKN 99

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  ARRVF  MP ++ VS+ +++ G+ + G   EA +LF  M H             L
Sbjct: 100 GMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLL 159

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
             G     +   R++   + +    ++V     ++  Y +   + EAR LF EMP+ + V
Sbjct: 160 QEG----RVDDARKLFDMMPE----KDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVV 211

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++  M++ YA N +   + KLF  +     +R++  ++ +L    +      GR     +
Sbjct: 212 TWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSWTAMLLGYTHS-----GRMREASS 262

Query: 302 IV-TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +     +  V V N ++  +   G  ++A+ +F  +       W+AMI  Y +KG   EA
Sbjct: 263 LFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEA 322

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF  M R  ++ +  +  S+L     LASL  GKQ+H+ ++RS F  +++  S L+ M
Sbjct: 323 LGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITM 382

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G+L  A Q F   P +++V WN++I+  +Q+G  +  L  F DM  SG  PD V+ 
Sbjct: 383 YVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTF 442

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + VLSACS+ G ++EGL+ F +M  KY++ P  EHYA +VD+L R+   +EA KL+ +MP
Sbjct: 443 IGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMP 502

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD I+W +++ +CR H  L+ A+ A ++L ++E  ++A PYV +SN+YA  G+W  V 
Sbjct: 503 MEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEP-KNAGPYVLLSNMYAYKGRWRDVE 561

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYK 659
            +++ ++ R V K+   SW+E++ KVH+FT  D + HP+   I + +E L   +++ GY 
Sbjct: 562 VLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYC 621

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD S  LHD DEE K  SL YHSE+LA+A+ L+  PEG PI VMKNLR C DCH+AIKLI
Sbjct: 622 PDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLI 681

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +K+TGREI +RD++RFHHFKDG CSC+D+W
Sbjct: 682 AKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 233/458 (50%), Gaps = 27/458 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NTVS N LISG++K+G L+ AR +F++M DR  VSWT ++ GY +     EA +LF
Sbjct: 81  MPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLF 140

Query: 61  VDMRTDGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M        + V++  +L G       D A +L  +  +        ++ + N ++  
Sbjct: 141 WHM-----PHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPE------KDVVAVTN-MIGG 188

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YC+   LD AR +F EMP+++ V++ A+++G+A+ G  + A KLF  M     + ++ ++
Sbjct: 189 YCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP----ERNEVSW 244

Query: 178 AAALSAGVGLADIALGRQVHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            A L     L     GR   A  +     V+ V V N ++  +  +  V +AR++F  M 
Sbjct: 245 TAML-----LGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMK 299

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E D  +++ MI  Y       E+L LFR +Q      +     ++LSV  +   L  G+Q
Sbjct: 300 ERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQ 359

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H Q + +    ++ VA+ L+ MY KCG    AK++F        V W +MI+ Y Q G 
Sbjct: 360 VHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGL 419

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGS 415
            EEALN+F +MC + +  D  TF  +L A +    +  G +L  +   +      +   +
Sbjct: 420 GEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYA 479

Query: 416 ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L+D+  ++  + +A++  ++MP E + + W AL+ AC
Sbjct: 480 CLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGAC 517


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/743 (35%), Positives = 423/743 (56%), Gaps = 7/743 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           +TN+L++ YVK+G    A  LF+ M +R  VS+  L  GY+     ++   L+  +  +G
Sbjct: 86  ATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREG 141

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
                +V F + L      D A     +H+ I+K GY+S   +  +L+++Y     +D A
Sbjct: 142 HELNPHV-FTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF+ +  KD V +  +++ + + G  E++++L   M   GF P+++TF  AL A +GL
Sbjct: 201 RSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGL 260

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                 + VH  ++KT +  +  V   LL LY++   + +A K+F EMP+ D V ++ MI
Sbjct: 261 GAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +  N    +++ +F  ++      ++F  S++L+  A      +G Q+H   +     
Sbjct: 321 ARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +V V+N+L+D+YAKC + + A ++FA LS  + V W  +I  Y   G   +ALN+F E 
Sbjct: 381 LDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREA 440

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  +S  + TF+S L A A LAS+ LG Q+H   I++     V   ++L+DMYAK G +
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDI 500

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K A   F EM   ++ SWNALIS  + +G  +  L+ F+ M  S  +P+ ++ L VLS C
Sbjct: 501 KVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGC 560

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S+ GLI++G   F SM   + + P  EHY  MV +  RSG  D+A  L+  +P+EP  ++
Sbjct: 561 SNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMI 620

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++     N EFA+++A+++ K+   +D A YV +SN+YA A QW +V+ ++K+M+
Sbjct: 621 WRAMLSASMNQYNEEFARRSAEEILKINP-KDEATYVLLSNMYAGAKQWANVASIRKSMK 679

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           E+GV+K    SW+E +  VH F+     HP    I   +E L  +  + GY PD +  L 
Sbjct: 680 EKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLL 739

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACTDCHAAIKLISKITGRE 726
           D D+E K + L  HSERLA+A+ L+  P   + IL+MKNLR C+DCH+A+K+IS I  R+
Sbjct: 740 DMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRD 799

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + +RD +RFHHF  G CSC D W
Sbjct: 800 LVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 240/511 (46%), Gaps = 10/511 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   + T+L  C   + +     +H DI+K G    L   N L+++Y K      A  +F
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EMP++++VS+  L  G+A     ++ + L+  +   G + +   F + L   V L    
Sbjct: 108 DEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +   +H+ +VK  +  N FV  AL++ YS    V  AR +F  +   D V +  +++CY 
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N  +++SL+L   +    F  + + F T L            + +H Q + T    + +
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V   L+ +Y + G   +A ++F  +     VPW+ MI+ + Q G   +A+++FI M    
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF 343

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T +SIL   A      LG+QLH  V++ GF  +V+  +AL+D+YAK   +  A+
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAV 403

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F E+  +N+VSWN +I      G+    L  F + +++      V+  S L AC+   
Sbjct: 404 KLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLA 463

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E G+Q  + +  K     +     S++D+  + G    A+ +  +M    D   W+++
Sbjct: 464 SMELGVQ-VHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEME-TIDVASWNAL 521

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           I+    H       + A ++F + K  D  P
Sbjct: 522 ISGYSTHG----LGRQALRIFDIMKGSDCKP 548


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/556 (40%), Positives = 354/556 (63%), Gaps = 2/556 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +HA +  + F  +VF+ N+L+ LY K   V +AR++F  MP  D  S+  +I  YA N
Sbjct: 84  RAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQN 143

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           +   E+L L   +   RF  + F F++LL          IG QIH  T+      +V V 
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG 203

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           ++L+DMYA+CGR + A  +F  L   + V W A+I+ + +KG+ E  L +F EM R    
Sbjct: 204 SALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           A   T++S+  A A + +L  GK +H+ +I+SG   + F G+ +LDMYAKSGS+ DA + 
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKV 323

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  + ++++V+WN++++A AQ G  +  +  FE+M + G   + ++ LS+L+ACSH GL+
Sbjct: 324 FDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLV 383

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           +EG QYF+ M ++Y L P+ +HY ++VD+L R+G  ++A   + +MP +P   +W +++ 
Sbjct: 384 KEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           SCR+HKN +  + AAD +F+++   D  P V + NIYA  GQW++ ++V+K M+  GV+K
Sbjct: 443 SCRMHKNAKIGQFAADHVFELDP-DDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKK 501

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
             A SWVE+++ VH+F AND+ HP++ EI +K E +  +++K GY P+T   L   DE+ 
Sbjct: 502 EPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQE 561

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           +   L+YHSE++A+AFALIN P G+ I +MKN+R C DCH+A + ISK+  REI VRD++
Sbjct: 562 RQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTN 621

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHF  G CSC D+W
Sbjct: 622 RFHHFSSGSCSCGDYW 637



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 206/385 (53%), Gaps = 1/385 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           + +L++ C+   + ++   +HA +    +   + + NSL+  YCK   +  ARRVF  MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D  S+ +LI G+A+  + +EA+ L   M    FKP+ FTFA+ L A    A   +G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA  VK ++ ++V+V +ALLD+Y++   +  A  +F ++   +GVS+N +I  +A    
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            + +L +F E+Q   F+ + F +S++ S +A    L+ G+ +H   I +       V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           ++DMYAK G   +A+++F  +     V W +M++A+ Q G   EA+  F EM +  +  +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q TF SIL A +    +  GKQ    +        +     ++D+  ++G L DA+    
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426

Query: 436 EMPERNIVS-WNALISACAQNGDAQ 459
           +MP +   + W AL+ +C  + +A+
Sbjct: 427 KMPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 183/342 (53%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G +A AR +F+ M  R   SWT LI GY+Q +   EA  L   M   G  
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM-LRGRF 161

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL       ++    Q+HA  +K+ ++  + + ++L+D Y +   +D+A  
Sbjct: 162 KPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIA 221

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI GFA++G  E  + +F EMQ  GF+ + FT+++  SA  G+  
Sbjct: 222 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA ++K+    + FV N +LD+Y+K   +++ARK+F  + + D V++N M+T 
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A     +E++  F E++      +Q  F ++L+  ++   ++ G+Q            E
Sbjct: 342 FAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPE 401

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           +    ++VD+  + G   +A   IF      +   W A++ +
Sbjct: 402 IDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGS 443



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 150/277 (54%), Gaps = 2/277 (0%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           + +L++  A    L   R IH     +     V + NSL+ +Y KCG   +A+ +F  + 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
                 WT++I+ Y Q    +EAL L   M R     +  TFAS+L+A+   AS  +G+Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+  ++  +  +V+ GSALLDMYA+ G +  AI  F ++  +N VSWNALI+  A+ GD
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            + TL  F +M ++G++    +  SV SA +  G +E+G ++ ++   K   R       
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWVHAHMIKSGERLSAFVGN 305

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +++D+  +SG   +A K+  ++  + D + W+S++ +
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA 341



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           ++A    + S++ A A   SL   + +H+ +  S F  +VF  ++L+ +Y K G++ DA 
Sbjct: 60  LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADAR 119

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  MP R++ SW +LI+  AQN      L     M++  ++P+  +  S+L A     
Sbjct: 120 RVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASA 179

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
               G Q  +++T KY         ++++D+  R G  D A  +  Q+    + + W+++
Sbjct: 180 SSGIGEQ-IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNAL 237

Query: 552 I 552
           I
Sbjct: 238 I 238


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/748 (34%), Positives = 425/748 (56%), Gaps = 16/748 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N V  + LI  Y K G    A  +F  M +   VSWT+++  + +   + +A +L+  
Sbjct: 148 DSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P+  TF  LL+  S     N    VHA ++ +     L++  +LVD YCK +
Sbjct: 208 M-IQTGVAPNEFTFVKLLAASSFLGL-NYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQ 265

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A +V K   + D   + A+I+GF +     EAI  F EM+  G  P++FT++  L+
Sbjct: 266 SIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILN 325

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVDGV 241
           A   +  + LG+Q+H+ VV      +V V N+L+D+Y K   ++E A + F  +   + +
Sbjct: 326 ACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVI 385

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+  +I  ++ +   +ES+K+F  +Q      + F  ST+L        L   R++H   
Sbjct: 386 SWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYI 445

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I   A ++V V N+LVD YA  G  ++A  + + + H   + +T++ +   Q GN E AL
Sbjct: 446 IKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMAL 505

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           N+   M + ++  D  + AS L A+A +  +  GKQLH + ++SG  S +   + L+D+Y
Sbjct: 506 NIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLY 565

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + DA ++F E+ E + VSWN LI   A NG   + L +FEDM  +G +PD ++ L
Sbjct: 566 GKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCL 625

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            VL ACSH GL++ GL YF SM +K+ +RP+ +HY  +VD+L R+G  +EA  ++  MPF
Sbjct: 626 LVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPF 685

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +PD +++ +++ +C++H N+   +  A Q  +++   D A YV ++N+Y  +G+ E   +
Sbjct: 686 KPDALIYKTLLGACKLHGNIPLGEHMARQGLELDP-SDPAFYVLLANLYDDSGRSELGEK 744

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            ++ MRERGVRK    SW+E ++ VH+FTA D  HPQ  +I  KIE+L+ + + +G    
Sbjct: 745 TRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGI--- 801

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
                + E+      +L +HSE+LA+AF LI+TP  +PI ++KN+R C DCH  I  +++
Sbjct: 802 ----WYQEN-----RALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTR 852

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  REI VRD +RFH FK G CSCR +W
Sbjct: 853 LVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 284/545 (52%), Gaps = 5/545 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+S Y K   +A AR+LF+ M  R   SWT+L+  Y +     EA +LF  M   G 
Sbjct: 53  SNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISG- 111

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T +T L  CS     N   +  A + K G++S  ++ ++L+D Y K  C   A 
Sbjct: 112 EYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAY 171

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           RVF+ M   D VS+  +++ F + G   +A++L+  M   G  P++FTF   L+A   L 
Sbjct: 172 RVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG 231

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+ VHA ++      N+ +  AL+D+Y K   + +A K+     E D   +  +I+
Sbjct: 232 -LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIIS 290

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +  + +++E++  F E++ +    + F +S +L+  ++ L L +G+QIH++ ++    +
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350

Query: 309 EVKVANSLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +V V NSLVDMY KC    E+A   F  ++  + + WT++I+ + + G  EE++ +F  M
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM 410

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  +  T ++IL A   + SL+  ++LH ++I++   ++V  G+AL+D YA  G +
Sbjct: 411 QGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMV 470

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA      M  R+++++ +L +   Q G+ +  L     M +   + D  SL S LSA 
Sbjct: 471 DDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAA 530

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +   ++E G Q  +  + K  L         +VD+  + GC  +A +   ++  EPD + 
Sbjct: 531 AGIPIMETGKQ-LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT-EPDAVS 588

Query: 548 WSSVI 552
           W+ +I
Sbjct: 589 WNGLI 593



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 241/443 (54%), Gaps = 13/443 (2%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S  +Y     ++S C+   +  + I +H+ IIK G+   + + N+L+  Y K   +  AR
Sbjct: 12  SKIEYSLLKDIVSFCNS-RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR 70

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F EMP +D  S+  L++ + K G +EEA++LF  M   G  P++FT + AL +   L 
Sbjct: 71  QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALR 130

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +   G +  A V K+ F  N  + +AL+D YSK  C  EA ++F  M   D VS+ +M++
Sbjct: 131 EFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVS 190

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +     + ++L+L+  +  T    ++F F  LL+  ++ L L  G+ +H   ++     
Sbjct: 191 SFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLA-ASSFLGLNYGKLVHAHLMMWRIEL 249

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + +  +LVDMY KC   E+A ++           WTA+IS + Q     EA+  F EM 
Sbjct: 250 NLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEME 309

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK-SGSL 427
            + +  +  T++ IL A + + +L LGKQ+HS V+ +G  ++V  G++L+DMY K S  +
Sbjct: 310 TSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMI 369

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +DA++ F+ +   N++SW +LI+  +++G  + ++K F  M   G +P+S +L ++L A 
Sbjct: 370 EDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGA- 428

Query: 488 SHCGLIEEGLQYFNSMTQKYKLR 510
             CG I+       S+TQ  KL 
Sbjct: 429 --CGTIK-------SLTQTRKLH 442



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 227/485 (46%), Gaps = 35/485 (7%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G  +H+ ++K  F E++F++N LL LY K   V EAR+LF EMP  D  S+ ++++ Y  
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              ++E+L+LF  +  +    ++F  ST L   +   +   G +       +   S   +
Sbjct: 94  IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L+D Y+KCG  +EA  +F  +++   V WT M+S++V+ G+  +AL L+  M +  +
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
           + ++ TF  +L AS+ L  L+ GK +H+ ++      N+   +AL+DMY K  S++DA++
Sbjct: 214 APNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVK 272

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---- 488
             K   E ++  W A+IS   Q+   +  + +F +M  SG  P++ +   +L+ACS    
Sbjct: 273 VSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILA 332

Query: 489 -------HCGLIEEGLQ----YFNSMTQKYK----------------LRPKKEHYASMVD 521
                  H  ++  GL+      NS+   Y                   P    + S++ 
Sbjct: 333 LDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIA 392

Query: 522 ILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
                G  +E+ K+   M      P+    S+++ +C   K+L   +K    + K     
Sbjct: 393 GFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADN 452

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           D     A+ + YA  G  +    V   M+ R V   T+ +    ++  H    N   H  
Sbjct: 453 DVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMN 512

Query: 639 TNEIR 643
            +++R
Sbjct: 513 KDDVR 517



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 164/304 (53%), Gaps = 8/304 (2%)

Query: 274 SQFPFSTLLSVVA--NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
           S+  +S L  +V+  N   ++ G  IH+  I      ++ ++N+L+ +Y KC    EA++
Sbjct: 12  SKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQ 71

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  +       WT ++SAY + GN EEAL LF  M  +    ++ T ++ LR+ + L  
Sbjct: 72  LFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALRE 131

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
            + G +  + V +SGF SN   GSAL+D Y+K G  ++A + F+ M   +IVSW  ++S+
Sbjct: 132 FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSS 191

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
             + G     L+ +  M+Q+G  P+  + + +L+A S  GL    L + + M  + +L  
Sbjct: 192 FVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNL 251

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
             +   ++VD+ C+    ++A K+ +++  E D  +W+++I+     ++L+F ++A    
Sbjct: 252 VLK--TALVDMYCKCQSIEDAVKV-SKLTLEYDVFLWTAIISG--FTQSLKF-REAITAF 305

Query: 572 FKME 575
            +ME
Sbjct: 306 HEME 309


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/633 (39%), Positives = 374/633 (59%), Gaps = 12/633 (1%)

Query: 124 LDLARRVFK--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAA 180
           L  A R+F+    P + + S+N LI  F + G  E+A+ LFVEM       P   T A  
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + +   + D+++GR V A+  K  F+ + FV N+L+ +Y+    VV A  LF  + +V G
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV-QVKG 236

Query: 241 V-SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA--NKL-DLQIGRQ 296
           V ++N MI  Y  N  +KE +++F+ +   R   + F   TLLSV     +L D  +G+ 
Sbjct: 237 VIAWNAMIAGYVKNGDWKEVVEMFKGMLEVR---APFDEVTLLSVATACGRLGDANLGQW 293

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           I         +    +A +LVDMYAKCG  ++A+ +F  +     V W+AMIS Y Q   
Sbjct: 294 IAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR 353

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
             EAL +F EM    ++ +  T  S+L A A L +L  GK +HS++ R      V  G+A
Sbjct: 354 CREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTA 413

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+D YAK G +KDA++ F+ MP RN  +W ALI   A NG ++  L+ F  M+++  +P 
Sbjct: 414 LVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPT 473

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            V+ + VL ACSH  L+EEG ++F SMTQ Y + P+ EHY  MVD+L R+G  DEA + +
Sbjct: 474 DVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFI 533

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP EP+ ++W +++++C +HKN+E  ++A  Q+  ++    +  Y+ +SN YA  GQW
Sbjct: 534 RNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCH-SGNYILLSNTYASVGQW 592

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           ++ + V+K M+E+GV K+   S +EL+  +  F A D  HPQ  EI  K+  +++ +K  
Sbjct: 593 KNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMV 652

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY P+T+ A  D DE  K  S+ +HSE+LAIAF L+ +  G+ I + KNLR C DCH+A 
Sbjct: 653 GYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSAT 712

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KLISK+  REI VRD +RFHHFKDG CSC D+W
Sbjct: 713 KLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 218/455 (47%), Gaps = 4/455 (0%)

Query: 19  SGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTF 76
           S +L+ A  LF       R+A S+ ILI  + +     +A  LFV+M  D    PD  T 
Sbjct: 115 SAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTV 174

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           A  +  CS     +    V A   K G+     + NSL+  Y     +  A  +F  +  
Sbjct: 175 ANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQV 234

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K  +++NA+I G+ K G  +E +++F  M  +     + T  +  +A   L D  LG+ +
Sbjct: 235 KGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWI 294

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
             +  +   + +  +A AL+D+Y+K   + +AR+LF  M   D V+++ MI+ Y  +++ 
Sbjct: 295 AEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRC 354

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           +E+L +F E+Q T  + +     ++LS  A    L+ G+ +H+          V +  +L
Sbjct: 355 REALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTAL 414

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VD YAKCG  ++A + F ++   +T  WTA+I      G   EAL LF  M  ANI    
Sbjct: 415 VDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTD 474

Query: 377 ATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
            TF  +L A +    +  G++   S     G    +     ++D+  ++G + +A Q  +
Sbjct: 475 VTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIR 534

Query: 436 EMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            MP E N V W AL+SAC  + + +   ++ + +V
Sbjct: 535 NMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIV 569



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 179/365 (49%), Gaps = 10/365 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y   G++  A  LF+++  +  ++W  +I GY +   ++E  ++F  M  +  +
Sbjct: 210 NSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGM-LEVRA 268

Query: 70  DPDYVTFATLLSGCSEPDTAN--ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             D VT  ++ + C     AN  + I  +A+  + G      +  +LVD Y K   LD A
Sbjct: 269 PFDEVTLLSVATACGRLGDANLGQWIAEYAE--EKGMLRSRNLATALVDMYAKCGELDKA 326

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RR+F  M  +D V+++A+I+G+ +     EA+ +F EMQ     P+D T  + LSA   L
Sbjct: 327 RRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVL 386

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+ VH+++ + +    V +  AL+D Y+K  C+ +A K F  MP  +  ++  +I
Sbjct: 387 GALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALI 446

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A N + +E+L+LF  +     + +   F  +L   ++   ++ GR+  T       I
Sbjct: 447 KGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGI 506

Query: 308 -SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALN 362
              ++    +VD+  + G  +EA +   N+    + V W A++SA     N+   EEAL 
Sbjct: 507 CPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALK 566

Query: 363 LFIEM 367
             + +
Sbjct: 567 QIVPL 571


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/664 (37%), Positives = 380/664 (57%), Gaps = 36/664 (5%)

Query: 86  PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           PD    L  VH+ +    ++    +   L+ +Y       LAR VF  +P+++ + +N +
Sbjct: 46  PDIKT-LKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVM 104

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I  +    L ++A+ +F +M   GF P  +T+   L A     ++ +G Q+H  V K   
Sbjct: 105 IRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGL 164

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             N+FV N L+ LY K  C+ EAR +  EM   D VS+N M+  YA N Q+ ++L + RE
Sbjct: 165 DLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICRE 224

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +   R        ++LL  V N                T++ + + V             
Sbjct: 225 MDGVRQKPDACTMASLLPAVTN----------------TSSENVLYV------------- 255

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
               +E+F NL   S V W  MIS Y++     ++++L+++M +  +  D  T AS+LRA
Sbjct: 256 ----EEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRA 311

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
             +L++L LG+++H +V R     N+   ++L+DMYA+ G L+DA + F  M  R++ SW
Sbjct: 312 CGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASW 371

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            +LISA    G     +  F +M  SG  PDS++ +++LSACSH GL+ EG  YF  MT 
Sbjct: 372 TSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTD 431

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            YK+ P  EH+A +VD+L RSG  DEA  ++ QMP +P+E +W ++++SCR++ N++   
Sbjct: 432 DYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGI 491

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
            AAD+L ++    ++  YV +SNIYA AG+W  V+ ++  M+ R +RK+   S VEL ++
Sbjct: 492 LAADKLLQLAP-EESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQ 550

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F A D  HPQ+ EI  ++  L+ +MK+ GY P T  ALHD +EE K   L  HSE+L
Sbjct: 551 VHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKL 610

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AI FA++NT E SPI + KNLR C DCH A KLISKI  REI +RD++RFHHFKDG CSC
Sbjct: 611 AIVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSC 669

Query: 746 RDFW 749
            D+W
Sbjct: 670 GDYW 673



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 215/469 (45%), Gaps = 41/469 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G    AR +F+ + +R  + + ++I  Y   + + +A  +F DM   GG  P
Sbjct: 73  LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDM-VSGGFSP 131

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ T+  +L  CS  D     +Q+H  + K G +  L + N L+  Y K  CL  AR V 
Sbjct: 132 DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVL 191

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EM  KD VS+N+++ G+A+    ++A+ +  EM  +  KP   T A+ L A        
Sbjct: 192 DEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA-------- 243

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                    V     ENV        LY          ++F  + +   VS+NVMI+ Y 
Sbjct: 244 ---------VTNTSSENV--------LY--------VEEMFMNLEKKSLVSWNVMISVYM 278

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    +S+ L+ ++     +      +++L    +   L +GR+IH           + 
Sbjct: 279 KNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNML 338

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + NSL+DMYA+CG  E+AK +F  +       WT++ISAY   G    A+ LF EM  + 
Sbjct: 339 LENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSG 398

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDA 430
            S D   F +IL A +    L+ GK     +     ++ +    A L+D+  +SG + +A
Sbjct: 399 QSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEA 458

Query: 431 IQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ-----SGY 473
               K+MP + N   W AL+S+C    +    + + + ++Q     SGY
Sbjct: 459 YNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGY 507



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 38/349 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y K G L  AR + + M  +  VSW  ++ GY+Q  QF +A  +  +M 
Sbjct: 167 NLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM- 225

Query: 65  TDG-GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            DG    PD  T A+LL   +   + N L                               
Sbjct: 226 -DGVRQKPDACTMASLLPAVTNTSSENVL------------------------------- 253

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
                 +F  + +K  VS+N +I+ + K  +  +++ L+++M     +P   T A+ L A
Sbjct: 254 --YVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRA 311

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L+ + LGR++H +V +     N+ + N+L+D+Y++  C+ +A+++F  M   D  S+
Sbjct: 312 CGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASW 371

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +I+ Y    Q   ++ LF E+Q +        F  +LS  ++   L  G+    Q   
Sbjct: 372 TSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTD 431

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
              I+  ++    LVD+  + GR +EA  I   +    +   W A++S+
Sbjct: 432 DYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSS 480



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+  T+++ +       S N+    E+F ++  ++ VSW ++I  Y + +   ++  L++
Sbjct: 232 PDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYL 291

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M      +PD +T A++L  C +        ++H  + +      +++ NSL+D Y + 
Sbjct: 292 QM-GKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARC 350

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            CL+ A+RVF  M  +D  S+ +LI+ +   G    A+ LF EMQ+ G  P    F A L
Sbjct: 351 GCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAIL 410

Query: 182 SA 183
           SA
Sbjct: 411 SA 412



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 38/269 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI  Y + G L  A+ +F+ M  R   SWT LI  Y    Q   A  LF +M+
Sbjct: 336 NMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ 395

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE----LIQVHADIIKFGYNSILIICNSLVDSYCK 120
             G S PD + F  +LS CS     NE      Q+  D   +    I+     LVD   +
Sbjct: 396 NSGQS-PDSIAFVAILSACSHSGLLNEGKFYFKQMTDD---YKITPIIEHFACLVDLLGR 451

Query: 121 IRCLDLARRVFKEMPQKDS------------VSFNALITGFAKEGLNE---EAIKLFVEM 165
              +D A  + K+MP K +            V  N  I   A + L +   E    +V +
Sbjct: 452 SGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLL 511

Query: 166 QHLGFKPSDFTFAAALSAGV---------GLADIALGRQVHAFVVKTNFVENVFVANALL 216
            ++  K   +T   A+ + +         G++++ L  QVH F+    +           
Sbjct: 512 SNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQS------K 565

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           ++Y +   +V   K  G +P+ D   ++V
Sbjct: 566 EIYEELSVLVGKMKELGYVPKTDSALHDV 594


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/743 (33%), Positives = 409/743 (55%), Gaps = 6/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K G+L  AR LF+   M     VSW  +I  +  +    EA  LF  M+  G
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVG 243

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            +   Y TF   L G  +P      + +H  ++K  + + + + N+L+  Y K   ++ A
Sbjct: 244 VASNTY-TFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDA 302

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            RVF+ M  +D VS+N L++G  +  L  +A+  F +MQ+ G KP   +    ++A    
Sbjct: 303 GRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRS 362

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++  G++VHA+ ++     N+ + N L+D+Y+K  CV      F  M E D +S+  +I
Sbjct: 363 GNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTII 422

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA NE + E++ LFR++Q    D       ++L   +        R+IH   +    +
Sbjct: 423 AGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY-VFKRDL 481

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +++ + N++V++Y + G  + A+  F ++     V WT+MI+  V  G   EAL LF  +
Sbjct: 482 ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            + NI  D     S L A+A L+SL  GK++H F+IR GF       S+L+DMYA  G++
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +++ + F  + +R+++ W ++I+A   +G     +  F+ M      PD ++ L++L AC
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYAC 661

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG ++F  M   Y+L P  EHYA MVD+L RS   +EA   +  MP +P   +
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEI 721

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C IH N E  + AA +L + +   ++  Y  +SNI+A  G+W  V +V+  M+
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDT-ENSGKYALISNIFAADGRWNDVEEVRLRMK 780

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM-KKEGYKPDTSCAL 666
             G++K    SW+E+ +K+H F A D+ HPQT++I  K+    + + KK GY   T    
Sbjct: 781 GNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVF 840

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+  EE K + L  HSERLA+ + L+ TP+G+ I + KNLR C DCH   K+ S+++ R 
Sbjct: 841 HNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRP 900

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRD++RFHHF+ G CSC DFW
Sbjct: 901 LVVRDANRFHHFERGLCSCGDFW 923



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/565 (29%), Positives = 300/565 (53%), Gaps = 10/565 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G+L  A ++F+ M +RT  SW  L+G +    ++ EA +L+ DMR  G +  
Sbjct: 85  LVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVA-I 143

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF ++L  C     +    ++H   +K GY   + +CN+L+  Y K   L  AR +F
Sbjct: 144 DACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLF 203

Query: 132 KE--MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
               M ++D+VS+N++I+    EG   EA+ LF  MQ +G   + +TF AAL      + 
Sbjct: 204 DGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSF 263

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG  +H  V+K+N   +V+VANAL+ +Y+K   + +A ++F  M   D VS+N +++ 
Sbjct: 264 VKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSG 323

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              NE Y ++L  FR++Q +     Q     L++      +L  G+++H   I     S 
Sbjct: 324 LVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSN 383

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+LVDMYAKC   +     F  +     + WT +I+ Y Q     EA+NLF ++  
Sbjct: 384 MQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQV 443

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D     S+LRA + L S +  +++H +V +   ++++   +A++++Y + G +  
Sbjct: 444 KGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQNAIVNVYGEVGHIDY 502

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+ +  ++IVSW ++I+ C  NG     L+ F  + Q+  QPDS++++S LSA ++
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +++G +    + +K     +    +S+VD+    G  + + K+   +  + D I+W+
Sbjct: 563 LSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVK-QRDLILWT 620

Query: 550 SVINSCRIH----KNLEFAKKAADQ 570
           S+IN+  +H    K +   KK  DQ
Sbjct: 621 SMINANGMHGCGNKAIALFKKMTDQ 645



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 253/522 (48%), Gaps = 20/522 (3%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFA--TLLSGCSEPDTANELIQVHADIIKFGYNS 106
            K   + AF+    + T   + P  +  A   LL  C       +  Q+HA ++K   ++
Sbjct: 20  NKGTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSA 79

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            L     LV  Y K   L  A +VF EM ++   S+NAL+  F   G   EAI+L+ +M+
Sbjct: 80  FL--ATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMR 137

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            LG      TF + L A   L +  LG ++H   VK  + E VFV NAL+ +Y K   + 
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLG 197

Query: 227 EARKLFGE--MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
            AR LF    M + D VS+N +I+ +       E+L LFR +Q      + + F   L  
Sbjct: 198 GARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG 257

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
           V +   +++G  IH   + +   ++V VAN+L+ MYAKCGR E+A  +F ++     V W
Sbjct: 258 VEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSW 317

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             ++S  VQ     +ALN F +M  +    DQ +  +++ AS    +L  GK++H++ IR
Sbjct: 318 NTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIR 377

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           +G  SN+  G+ L+DMYAK   +K     F+ M E++++SW  +I+  AQN      +  
Sbjct: 378 NGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINL 437

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM----- 519
           F  +   G   D + + SVL ACS       GL+  N + + +    K++    M     
Sbjct: 438 FRKVQVKGMDVDPMMIGSVLRACS-------GLKSRNFIREIHGYVFKRDLADIMLQNAI 490

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           V++    G  D A +    +    D + W+S+I  C +H  L
Sbjct: 491 VNVYGEVGHIDYARRAFESIR-SKDIVSWTSMITCC-VHNGL 530



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 158/346 (45%), Gaps = 21/346 (6%)

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           +SL L          R +   S LL +      L  G+Q+H   ++ + +S   +A  LV
Sbjct: 29  QSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHA-LLLKSHLSAF-LATKLV 86

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MY KCG   +A ++F  +S  +   W A++ A+V  G   EA+ L+ +M    ++ D  
Sbjct: 87  LMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDAC 146

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE- 436
           TF S+L+A   L    LG ++H   ++ G+   VF  +AL+ MY K G L  A   F   
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 437 -MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            M + + VSWN++ISA    G+    L  F  M + G   ++ + ++ L        ++ 
Sbjct: 207 MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 496 GLQYFNSMTQKYKLRPKKEHYA------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           G+    ++        K  H+A      +++ +  + G  ++A ++   M    D + W+
Sbjct: 267 GMGIHGAVL-------KSNHFADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWN 318

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           ++++   + +N E    A +    M+        V++ N+ A +G+
Sbjct: 319 TLLSG--LVQN-ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGR 361


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/789 (33%), Positives = 436/789 (55%), Gaps = 45/789 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTI-----LIGGYSQKNQFRE 55
           M  +   + N LI+  V+ G   +     N+  +      ++     LI GY+     +E
Sbjct: 45  MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 104

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
           A  +++ M    G  PD  TF  LLS CS+    +E +QVH  ++K G    L + NSL+
Sbjct: 105 AIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI 164

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             Y     +DL R+VF EM +++ VS+ +LI G++   + +EA+ LF EM  +G +P+  
Sbjct: 165 HFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPV 224

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T   A+SA   L D+ LG++V   + +     N  V NALLD+Y K   +   R++F E 
Sbjct: 225 TMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF 284

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVVA---NKLDL 291
            + + V YN +++ Y  +    E L +  E+      + Q P   T+LS +A      DL
Sbjct: 285 SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEM----LQKGQRPDKVTMLSTIAACAQLGDL 340

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            +G+  H             ++N+++DMY KCG+ E A ++F ++S+ + V W ++I+  
Sbjct: 341 SVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGL 400

Query: 352 VQKGNLEEALNLFIEMCRAN-------------------------------ISADQATFA 380
           V+ G LE AL +F EM  +N                               I  D+ T  
Sbjct: 401 VRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMV 460

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
            I  A   L +L L K +++++ ++    ++  G+AL+DM+++ G   +A++ F+ M +R
Sbjct: 461 GIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKR 520

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++ +W A I   A  G+A+  ++ F++M++   + D    +++L+A SH G +++G Q F
Sbjct: 521 DVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLF 580

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
            +M + + + P+  HY  MVD+L R+G  +EA  LM  MP +P++++W S + +CR HKN
Sbjct: 581 WAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKN 640

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
           +EFA  A +++ ++        +V +SNIYA AG+W  V++V+  M+E+G +KV   S +
Sbjct: 641 VEFANYADEKITQLAP-EKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSI 699

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           E+   +  FT+ DE H +  +I   ++ +   + + GY PDT+  L D DE+ K   L  
Sbjct: 700 EVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSR 759

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSE+LA+A+ LINT +G PI V+KNLR C+DCH+  KL+SK+ GREITVRD++R+H FK+
Sbjct: 760 HSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKE 819

Query: 741 GFCSCRDFW 749
           GFCSCRDFW
Sbjct: 820 GFCSCRDFW 828



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 264/560 (47%), Gaps = 47/560 (8%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLARRVFKEMPQKDSVSF-- 142
           T  EL Q+H +++K G  +I    N L+ +  ++     L+ A   FKE        +  
Sbjct: 34  TLIELKQLHCNMLKKGVFNI----NKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTC 89

Query: 143 NALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           N LI G+A  GL +EAI +++ M   +G  P +FTF   LSA   +   + G QVH  VV
Sbjct: 90  NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 149

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           K   V+++FVAN+L+  Y+    V   RK+F EM E + VS+  +I  Y+     KE++ 
Sbjct: 150 KMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 209

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           LF E+     + +       +S  A   DL++G+++          S   V N+L+DMY 
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYM 269

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           KCG     +EIF   S  + V +  ++S YVQ G   E L +  EM +     D+ T  S
Sbjct: 270 KCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLS 329

Query: 382 ILRASAELASLSLGKQLHSFVIRSGF--MSNVFSGSALLDMYAK---------------- 423
            + A A+L  LS+GK  H++V R+G   + N+   +A++DMY K                
Sbjct: 330 TIAACAQLGDLSVGKSSHAYVFRNGLERLDNI--SNAIIDMYMKCGKREAACKVFDSMSN 387

Query: 424 ---------------SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
                           G L+ A++ F EMPE N+VSWN +I A  Q    +  +    +M
Sbjct: 388 KTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREM 447

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
              G + D V+++ + SAC + G ++   ++  +  +K  +    +   ++VD+  R G 
Sbjct: 448 QNQGIKGDRVTMVGIASACGYLGALDLA-KWIYTYIEKNDIHIDMQLGTALVDMFSRCGD 506

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
              A ++   M  + D   W++ I    +  N + A +  D++ K +   D   +VA+  
Sbjct: 507 PLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLT 565

Query: 589 IYAVAGQWESVSQVKKAMRE 608
            ++  G  +   Q+  AM +
Sbjct: 566 AFSHGGYVDQGRQLFWAMEK 585


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/658 (34%), Positives = 397/658 (60%), Gaps = 4/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y   G L  AR++F+ M +R  V W +++ GY +      A +LF DMR  G  +P
Sbjct: 187 LIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASG-CEP 245

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T A  LS  +        +Q+H   +K+G  S + + N+LV  Y K +CLD   ++F
Sbjct: 246 NFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+ D V++N +I+G  + G  ++A+ LF +MQ  G +P   T  + L A   L    
Sbjct: 306 GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H ++V+     +VF+ +AL+D+Y K   V  A+ ++     +D V  + MI+ Y 
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   +E++K+FR L       +    +++L   A+   +++G+++H+  +         
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++L+DMYAKCGR + +  IF+ +S    V W +MIS++ Q G  EEALNLF EMC   
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +     T +S+L A A L ++  GK++H  VI+    +++F+ SAL+DMY K G+L+ A 
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ MPE+N VSWN++I++    G  + ++     M + G++ D V+ L+++SAC+H G
Sbjct: 606 RVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EGL+ F  MT++Y++ P+ EH+A MVD+  R+G  D+A +L+  MPF+PD  +W ++
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H+N+E A+ A+ +LFK++   ++  YV MSNI AVAG+W+ VS+V++ M++  V
Sbjct: 726 LHACRVHRNVELAEIASQELFKLDP-HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKV 784

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY--KPDTSCALH 667
           +K+  YSWV++ +  H+F A D+ HP + +I   +++++ E+++EGY   PD  C  H
Sbjct: 785 QKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIPMPDLCCPTH 842



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 180/689 (26%), Positives = 332/689 (48%), Gaps = 36/689 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +T     L+  YV +     A  +F+S+       A+ W  LI G +    +R A   ++
Sbjct: 74  DTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133

Query: 62  DMRTDGGSD-PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M     +  PD  TF  ++  C+          VH      G +  + + ++L+  Y  
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  AR+VF  M ++D V +N ++ G+ K G    A++LF +M+  G +P+  T A  
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS     +D+  G Q+H   VK      V VAN L+ +Y+K  C+ +  KLFG MP  D 
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V++N MI+    N    ++L LF ++Q +          +LL  + +      G+++H  
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +      +V + ++LVD+Y KC     A+ ++ +   I  V  + MIS YV  G  +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           + +F  +    I  +    AS+L A A +A++ LG++LHS+ +++ +    +  SAL+DM
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G L  +   F ++  ++ V+WN++IS+ AQNG+ +  L  F +M   G +  +V++
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            SVLSAC+    I  G +  + +  K  +R      ++++D+  + G  + A ++   MP
Sbjct: 554 SSVLSACASLPAIYYGKE-IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612

Query: 541 FEPDEIMWSSVINS----CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            E +E+ W+S+I S      + +++   +   ++ FK     D   ++A+ +  A AGQ 
Sbjct: 613 -EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKA----DHVTFLALVSACAHAGQV 667

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +   ++ + M E            ++  ++  F    +L+ +  ++ + +E L+ +M   
Sbjct: 668 QEGLRLFRCMTEE----------YQIAPRMEHFACMVDLYSRAGKLDKAME-LIVDMP-- 714

Query: 657 GYKPDT--------SCALHDEDEEIKVES 677
            +KPD         +C +H   E  ++ S
Sbjct: 715 -FKPDAGIWGALLHACRVHRNVELAEIAS 742



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 10/272 (3%)

Query: 291 LQIGRQIHTQTIVTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSH---ISTVPWTA 346
           L +G Q+H + +      ++  +   LV MY    RF +A  +F++L        +PW  
Sbjct: 55  LSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNW 114

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA---DQATFASILRASAELASLSLGKQLHSFVI 403
           +I      G+   AL  +++M  A+ SA   D  TF  ++++ A L +++LG+ +H    
Sbjct: 115 LIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTAR 173

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
             G   ++F GSAL+ MYA  G L DA Q F  M ER+ V WN ++    + G   + ++
Sbjct: 174 TLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F DM  SG +P+  +L   LS  +    +  G+Q  +++  KY L  +     ++V + 
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQ-LHTLAVKYGLESEVAVANTLVSMY 292

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            +  C D+  KL   MP + D + W+ +I+ C
Sbjct: 293 AKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           ++LR     + LSLG Q+H   + +G   ++    + L+ MY  +   +DA+  F  +P 
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 440 RN---IVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIE 494
                 + WN LI      GD ++ L  +  M    S   PDS +   V+ +C+  G I 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G +  +   +   L       ++++ +    G   +A ++   M  E D ++W+ +++ 
Sbjct: 164 LG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNVMMDG 221


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/674 (37%), Positives = 399/674 (59%), Gaps = 4/674 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ-- 136
           LL+   +  +     Q+H  II   Y S+  + N+L++ Y K  CL+ A  +F       
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K  V++ +LIT  +   ++ +A+ LF +M+  G  P+ FTF++ LSA      +  G+Q+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H+ + K  F  N+FV  AL+D+Y+K   +  A ++F +MPE + VS+N MI  +  N  Y
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 257 KESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             ++ +F++ L+      ++   S++LS  AN   L  GRQ+H   +    +    V NS
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+DMY KC  F+E  ++F  +     V W  ++  +VQ    EEA N F  M R  I  D
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           +A+F+++L +SA LA+L  G  +H  +I+ G++ N+    +L+ MYAK GSL DA Q F+
Sbjct: 448 EASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFE 507

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            + + N++SW A+ISA   +G A   ++ FE M+  G +P  V+ + VLSACSH G +EE
Sbjct: 508 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           GL +FNSM + + + P  EHYA MVD+L R+G  DEA++ +  MP +P   +W +++ +C
Sbjct: 568 GLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGAC 627

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
           R + NL+  ++AA++LF+ME   +   YV ++N+   +G+ E  ++V++ M   GVRK  
Sbjct: 628 RKYGNLKMGREAAERLFEMEPY-NPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEP 686

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             SW+++K+   VFTA+D  H  ++EI + +E L + +KK+GY  +T    +  +E  + 
Sbjct: 687 GCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEE 746

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
           + L YHSE+LA+AF L+  P  SPI + KNLR C  CH  +KL SKI  REI VRD +RF
Sbjct: 747 QGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRF 806

Query: 736 HHFKDGFCSCRDFW 749
           H F DGFCSC D+W
Sbjct: 807 HRFADGFCSCGDYW 820



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 17/367 (4%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K  ++ +A  +F+ M +R  VSW  +I G+   N +  A  +F D+  +    P
Sbjct: 286 LVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIP 345

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + V+ +++LS C+     N   QVH  ++K+G   +  + NSL+D Y K R  D   ++F
Sbjct: 346 NEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLF 405

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + +  +D V++N L+ GF +    EEA   F  M+  G  P + +F+  L +   LA + 
Sbjct: 406 QCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALH 465

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H  ++K  +V+N+ +  +L+ +Y+K   +V+A ++F  + + + +S+  MI+ Y 
Sbjct: 466 QGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 525

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-------RQIHTQTIVT 304
            +    + ++LF  +     + S   F  +LS  ++   ++ G       ++IH      
Sbjct: 526 LHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGP 585

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE---EA 360
              +       +VD+  + G  +EAK    ++    T   W A++ A  + GNL+   EA
Sbjct: 586 EHYA------CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639

Query: 361 LNLFIEM 367
                EM
Sbjct: 640 AERLFEM 646



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 1/178 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L+  Y K        +LF  + DR  V+W +L+ G+ Q ++F EA   F  MR 
Sbjct: 382 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 441

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           + G  PD  +F+T+L   +     ++   +H  IIK GY   + I  SL+  Y K   L 
Sbjct: 442 E-GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 500

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            A +VF+ +   + +S+ A+I+ +   G   + I+LF  M   G +PS  TF   LSA
Sbjct: 501 DAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 558



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 10/181 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K G+L  A ++F  + D   +SWT +I  Y       +  +LF  M ++ G +P
Sbjct: 489 LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSE-GIEP 547

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIRCLDLARR 129
            +VTF  +LS CS      E +  H + +K     N        +VD   +   LD A+R
Sbjct: 548 SHVTFVCVLSACSHTGRVEEGL-AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKR 606

Query: 130 VFKEMPQKDSVS-FNALITGFAKEG---LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
             + MP K + S + AL+    K G   +  EA +   EM+   + P ++   A +    
Sbjct: 607 FIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME--PYNPGNYVLLANMCTRS 664

Query: 186 G 186
           G
Sbjct: 665 G 665


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/632 (37%), Positives = 370/632 (58%), Gaps = 2/632 (0%)

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K+   + A+ + +  P +  V++ ALI+G  + G    A+  F +M+    KP+DFTF
Sbjct: 2   YSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTF 61

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
             A  A   L     G+Q+HA  +K   + + FV  +  D+YSK     EA++LF EMP 
Sbjct: 62  PCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPP 121

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            +   +N  I+    + +  +++  F E +    +     F   L+  A+   L +GRQ+
Sbjct: 122 RNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQL 181

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   I +    +V VAN ++D+Y KC   E A+ +F  +   ++V W  M++A  Q    
Sbjct: 182 HGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEK 241

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E+A  +F+   +  I       +S++ A A ++ L  G+ +H+  +++    ++F GSAL
Sbjct: 242 EKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSAL 301

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMY K GS++D  Q F EMPERN+VSWNA+IS  A  GD    +  FE+M QS    + 
Sbjct: 302 VDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVANY 360

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           V+L+ VLSACS  G ++ G + F SM  +Y++ P  EHYA + D+L R+G  + A + + 
Sbjct: 361 VTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQ 420

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MP  P   +W +++N+CR++   E  K AAD LFK++  +D+  +V +SN++A AG+W+
Sbjct: 421 KMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDP-KDSGNHVLLSNMFAAAGRWD 479

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
             + V+K M++ G++K    SWV  K+KVHVF A D  H + +EI+  +  L  EM+  G
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAG 539

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y PDT+ AL+D +EE K+  + YHSE++A+AF LI  P G PI + KNLR C DCH+A K
Sbjct: 540 YMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFK 599

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IS I GREI VRD++RFH F+D  CSCRDFW
Sbjct: 600 FISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 210/427 (49%), Gaps = 4/427 (0%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R  V+WT LI G  Q   F  A   F  MR +    P+  TF       +         Q
Sbjct: 21  RCVVTWTALISGSVQNGYFSSALLYFSKMRREN-IKPNDFTFPCAFKASTALCLPFAGKQ 79

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA  +K G  +   +  S  D Y K      A+R+F EMP ++   +NA I+    +G 
Sbjct: 80  IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             +AI  F+E + +G +P   TF A L+A      + LGRQ+H  V+++ F  +V VAN 
Sbjct: 140 PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANG 199

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           ++D+Y K   V  A  +F  M   + VS+  M+     N++ +++  +F   +    + +
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            +  S+++S  A    L+ GR +H   +      ++ V ++LVDMY KCG  E+ +++F 
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   + V W AMIS Y  +G+++ A+ LF EM ++   A+  T   +L A +   ++ L
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDVDMAMTLFEEM-QSEAVANYVTLICVLSACSRGGAVKL 378

Query: 395 GKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
           G ++  S   R          + + DM  ++G ++ A +  ++MP R  +S W AL++AC
Sbjct: 379 GNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNAC 438

Query: 453 AQNGDAQ 459
              G+ +
Sbjct: 439 RVYGEPE 445



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 8/355 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K+G    A+ LF+ M  R    W   I       +  +A   F++ R  GG +PD +T
Sbjct: 103 YSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGG-EPDLIT 161

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F   L+ C++    +   Q+H  +I+ G+   + + N ++D Y K + ++LA  VF  M 
Sbjct: 162 FCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG 221

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++SVS+  ++    +    E+A  +F+  +  G + +D+  ++ +SA  G++ +  GR 
Sbjct: 222 RRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRS 281

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VHA  VK     ++FV +AL+D+Y K   + +  ++F EMPE + VS+N MI+ YA    
Sbjct: 282 VHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGD 341

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVAN 314
              ++ LF E+Q +    +      +LS  +    +++G +I         I    +   
Sbjct: 342 VDMAMTLFEEMQ-SEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYA 400

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE----EALNLF 364
            + DM  + G  E A E    +    T+  W A+++A    G  E     A NLF
Sbjct: 401 CIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLF 455



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 1/158 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N +I  Y K   +  A  +FN M  R +VSW  ++    Q ++  +A  +F+  R +G 
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              DY+  ++++S  +          VHA  +K      + + ++LVD Y K   ++   
Sbjct: 257 ELTDYMV-SSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCE 315

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
           +VF EMP+++ VS+NA+I+G+A +G  + A+ LF EMQ
Sbjct: 316 QVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQ 353



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 7/133 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G++    ++F+ M +R  VSW  +I GY+ +     A  LF +M+++  +  
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-- 358

Query: 72  DYVTFATLLSGCSEPDT---ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           +YVT   +LS CS        NE+ +   D  +    +    C  + D   +   ++ A 
Sbjct: 359 NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYAC--IADMLGRAGMVERAY 416

Query: 129 RVFKEMPQKDSVS 141
              ++MP + ++S
Sbjct: 417 EFVQKMPIRPTIS 429



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 30/213 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILI---GGYSQKNQFREAF 57
           MP +N VS N +ISGY   G++  A  LF  M      ++  LI      S+    +   
Sbjct: 321 MPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGN 380

Query: 58  KLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           ++F  MR     +P    Y   A +L      + A E +Q      K      + +  +L
Sbjct: 381 EIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQ------KMPIRPTISVWGAL 434

Query: 115 VDSYCKIRCLD-----LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           +++ C++          A  +FK  P KDS +   L   FA  G  +EA  +  EM+ +G
Sbjct: 435 LNA-CRVYGEPELGKIAADNLFKLDP-KDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVG 492

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
            K            G G + +    +VH F  K
Sbjct: 493 IK-----------KGAGCSWVTAKNKVHVFQAK 514



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+K      A    +  P R +V+W ALIS   QNG   + L  F  M +   +P+  +
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
                 A +   L   G Q  +++  K      K    S  D+  ++G   EA++L  +M
Sbjct: 61  FPCAFKASTALCLPFAGKQ-IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 540 PFEPDEI-MWSSVINS 554
           P  P  + +W++ I++
Sbjct: 120 P--PRNVAVWNAYISN 133


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/659 (36%), Positives = 393/659 (59%), Gaps = 4/659 (0%)

Query: 93  IQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           I  H  I    Y +S +   NSL++ Y K   + +AR++F  MP+++ VS++AL+ G+ +
Sbjct: 41  IHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQ 100

Query: 152 EGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
            G   E  +LF +M       P+++  A A+S+      +  G+Q H + +K+    + +
Sbjct: 101 NGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQY 159

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V NAL+ LYSK   V  A ++   +P  D   YN+++     +    E++ + + +    
Sbjct: 160 VKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEG 219

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + +   + T+  + A+  D+ +G+Q+H Q + +    +V + +S++DMY KCG     +
Sbjct: 220 IEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGR 279

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  L   + V WT++I+AY Q    EEALNLF +M    I  ++ T A +  ++A L+
Sbjct: 280 TFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLS 339

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L LG QLH+   +SG   NV  G+AL+ MY KSG +  A   F  M   NI++WNA+I+
Sbjct: 340 ALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIIT 399

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             + +G  +  L  F+DM+ +G +P+ V+ + V+ AC+H  L++EG  YFN + +++++ 
Sbjct: 400 GHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIV 459

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P  EHY  +V +L RSG  DEAE  M       D + W +++N+C +HK+ +  +K A+ 
Sbjct: 460 PGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEY 519

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           L ++E  RD   Y+ +SN++A   +W+ V +++K MRER V+K    SW+E+++  HVFT
Sbjct: 520 LLQLEP-RDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFT 578

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           + D  HP+ N I   +++L+ +++  GY PD    LHD ++E KV++L YHSE+LA+A+ 
Sbjct: 579 SEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYG 638

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           L+ TP G+PI V+KNLR C DCH AIKLISK+  R I VRD++RFHHF++G CSC D+W
Sbjct: 639 LMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 232/479 (48%), Gaps = 7/479 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ YVK   ++ AR+LF+SM  R  VSW+ L+ GY Q     E F+LF  M      
Sbjct: 61  NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+    AT +S C +     E  Q H   +K G      + N+L+  Y K   +  A +
Sbjct: 121 FPNEYVIATAISSC-DSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +   +P  D   +N ++ G  +     EA+ +   +   G + ++ T+         L D
Sbjct: 180 ILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKD 239

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I LG+QVHA ++K++   +V++ ++++D+Y K   V+  R  F  +   + VS+  +I  
Sbjct: 240 ITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  NE ++E+L LF +++      +++  + L +  A    L +G Q+H +   +     
Sbjct: 300 YFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGN 359

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N+L+ MY K G    A+ +F+N++  + + W A+I+ +   G  +EAL++F +M  
Sbjct: 360 VMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMA 419

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLK 428
                +  TF  ++ A A L  +  G    + +++    +  +   + ++ + ++SG L 
Sbjct: 420 TGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLD 479

Query: 429 DAIQTFKEMPERN--IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           +A + F    + N  +VSW  L++AC  +       K  E ++Q   +P  V    +LS
Sbjct: 480 EA-ENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQ--LEPRDVGTYILLS 535



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 17/321 (5%)

Query: 266 LQFTRF-DRSQFPFST------LLSVVANKLDLQIGRQIHTQTIVTTA---ISEVKVANS 315
           ++FT F  RS F  S       LL V A+  +L+ GR IH    +T      S+V   NS
Sbjct: 3   VKFTPFLSRSNFLASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNS 62

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISA 374
           L+++Y KC     A+++F ++   + V W+A+++ Y+Q GN  E   LF +M  + NI  
Sbjct: 63  LINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFP 122

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           ++   A+ + +S +      GKQ H + ++SG   + +  +AL+ +Y+K   +  AIQ  
Sbjct: 123 NEYVIATAI-SSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQIL 181

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             +P  +I  +N +++   Q+      +   + ++  G + ++ + +++   C+    I 
Sbjct: 182 YTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDIT 241

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G Q    M  K  +       +S++D+  + G          ++    + + W+S+I +
Sbjct: 242 LGKQVHAQML-KSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQ-SRNVVSWTSIIAA 299

Query: 555 CRIHKNLEFAKKAADQLFKME 575
              +   EF ++A +   KME
Sbjct: 300 ---YFQNEFFEEALNLFSKME 317



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI  Y KSG++  A+ +F++M     ++W  +I G+S     +EA  +F DM 
Sbjct: 359 NVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMM 418

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE 91
              G  P+YVTF  ++  C+     +E
Sbjct: 419 AT-GERPNYVTFIGVILACAHLKLVDE 444


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/684 (36%), Positives = 384/684 (56%), Gaps = 9/684 (1%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARR 129
           PD  TF  L+     P +A    Q+HA  ++ G  +  +    SLV +Y +   +  A R
Sbjct: 67  PDSFTFPPLVRAAPGPASA---AQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EMP++D  ++NA+++G  +     +A+ L   M   G      T ++ L   V L D
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            AL   +H + VK      +FV NAL+D+Y K   + EA  +FG M   D V++N +I+ 
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT-AIS 308
                +   +++LF  +  +          +L S VA   D    + +H         + 
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++   N++VDMYAK  + + A+++F NL     V W  +I+ Y+Q G   EA+ ++ +M 
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363

Query: 369 -RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +   Q TF S+L A + L  L  G ++H+  I++G   +V+  + L+D+YAK G L
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +A+  F+ MP R+   WNA+I+    +G     L  F  M Q   +PD V+ +S+L+AC
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+++G  +F+ M   Y + P  +HY  MVD+L R+G  DEA + +  MP +PD  +
Sbjct: 484 SHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAV 543

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CRIH N+E  K A+  LF+++   +   YV MSN+YA  G+W+ V  V+  +R
Sbjct: 544 WGALLGACRIHGNVEMGKVASQNLFELDP-ENVGYYVLMSNMYAKIGKWDGVDAVRSLVR 602

Query: 608 ERGVRKVTAYSWVELKSKVHVFTAN--DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
            + ++K   +S +E+K  V VF +    E HPQ  EI+R + +L+ +MK  GY PD S  
Sbjct: 603 RQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFV 662

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L D +E+ K + L  HSERLAIAF +INTP G+P+ + KNLR C DCH+A K ISKIT R
Sbjct: 663 LQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITER 722

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD++RFHHFKDG CSC DFW
Sbjct: 723 EIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 170/353 (48%), Gaps = 5/353 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  A  +F  M  R  V+W  +I    Q  +   A +LF  M  + G 
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGM-MESGV 265

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDLAR 128
            PD +T  +L S  ++         VH  + + G++   +I  N++VD Y K+  +D A+
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGL 187
           +VF  +P +D VS+N LITG+ + GL  EAI+++ +M  H G KP   TF + L A   L
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G ++HA  +KT    +V+V   L+DLY+K   +VEA  LF  MP      +N +I
Sbjct: 386 GGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAII 445

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
                +    ++L LF ++Q          F +LL+  ++   +  GR           I
Sbjct: 446 AGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGI 505

Query: 308 SEV-KVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             + K    +VDM  + G+ +EA E   ++     +  W A++ A    GN+E
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE 558



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + ++ N ++  Y K   +  A+++F+++ DR  VSW  LI GY Q     EA +++ DM 
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P   TF ++L   S      + +++HA  IK G N  + +   L+D Y K   L
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA- 183
             A  +F+ MP++ +  +NA+I G    G   +A+ LF +MQ    KP   TF + L+A 
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483

Query: 184 -GVGLAD 189
              GL D
Sbjct: 484 SHAGLVD 490


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/688 (36%), Positives = 398/688 (57%), Gaps = 18/688 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL   +   +    +Q+HA ++K G+ S  ++ N+L+D Y K   L +A  VF  MP
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 262

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ VS+ AL+ GF   G   E ++LF EM+  G  P++FT +A L A  G      G Q
Sbjct: 263 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQ 320

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   V+T F  +  VAN+L+ +YSK     +AR++F  +P  +  ++N MI+ YA   Q
Sbjct: 321 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 380

Query: 256 YKESLKLFRELQFTRFDRS--QFPFSTLLSVVANKLDLQIGRQIHTQTIV--TTAISEVK 311
            ++SL +FRE+Q  R D    +F F++LL   +     + G Q+H    V   +  S   
Sbjct: 381 GRDSLLVFREMQ-RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 439

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A +L+D+Y KC R   A ++F  L   + + WT +I  + Q+G ++EA+ LF     + 
Sbjct: 440 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 499

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           + AD    +S++   A+ A +  GKQ+H +  ++    +V   ++L+DMY K G   +A 
Sbjct: 500 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 559

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+EMP RN+VSW A+I+   ++G  +  +  FE+M   G + D V+ L++LSACSH G
Sbjct: 560 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 619

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++E  +YF+ + Q  ++RPK EHYA MVD+L R+G   EA++L+  MP EP   +W ++
Sbjct: 620 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 679

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+HK++   ++  D L  ++   +   YV +SNI A AG+W     ++ AMR +G+
Sbjct: 680 LSACRVHKDVAVGREVGDVLLAVDG-DNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 738

Query: 612 RKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALHDE 669
           RK    SW E+  +VH F    D+ HPQ  +IRR +  +   M++  GY  D  CALHD 
Sbjct: 739 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 798

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSP--------ILVMKNLRACTDCHAAIKLISK 721
           DEE +VESL+ HSERLA+   L+    G          + V KNLR C DCH  +K +S 
Sbjct: 799 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 858

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  R + VRD++RFH F++G CSCRD+W
Sbjct: 859 VVRRVVVVRDANRFHRFQNGACSCRDYW 886



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 237/460 (51%), Gaps = 8/460 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  Y K G L  A E+F+ M +R  VSWT L+ G+    + RE  +LF +
Sbjct: 232 GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 291

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G S P+  T +  L  C     A   +Q+H   ++ G+    ++ NSLV  Y K R
Sbjct: 292 MRGSGTS-PNEFTLSATLKACGGGTRAG--VQIHGVCVRTGFEGHDVVANSLVVMYSKGR 348

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAAL 181
               ARRVF  +P ++  ++N++I+G+A  G   +++ +F EMQ     +P +FTFA+ L
Sbjct: 349 WTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLL 408

Query: 182 SAGVGLADIALGRQVHA--FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A  GL     G QVHA   V   +   N  +A ALLD+Y K   +  A ++F  +   +
Sbjct: 409 KACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRN 468

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            + +  +I  +A   Q KE++ LFR    +         S++++V A+   ++ G+Q+H 
Sbjct: 469 AIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHC 528

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            T  T A  +V VANSLVDMY KCG   EA   F  +   + V WTAMI+   + G+  E
Sbjct: 529 YTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGRE 588

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LL 418
           A++LF EM    + AD+  + ++L A +    +   ++  S + +   M       A ++
Sbjct: 589 AIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMV 648

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           D+  ++G L++A +    MP E  +  W  L+SAC  + D
Sbjct: 649 DLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKD 688



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  N +    L+  YVK   L  A ++F+ +  R A+ WT +I G++Q+ Q +EA  LF 
Sbjct: 434 PASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR 493

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              + G     +V  +++++  ++     +  QVH    K      + + NSLVD Y K 
Sbjct: 494 RFWSSGVRADGHV-LSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 552

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                A R F+EMP ++ VS+ A+I G  K G   EAI LF EMQ  G +  +  + A L
Sbjct: 553 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 612

Query: 182 SA 183
           SA
Sbjct: 613 SA 614


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/507 (44%), Positives = 320/507 (63%), Gaps = 32/507 (6%)

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +QF  ST++   A+   L+ G+Q H   I     S+V V  +LV MYA+CG  E+A  +F
Sbjct: 9   NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68

Query: 334 ANLSHIST-------------------------------VPWTAMISAYVQKGNLEEALN 362
             +S  ST                               V WTA+I+ Y Q G  +E+LN
Sbjct: 69  DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           +F +M +  + +D+    S+L A A+LA+L LG+Q H++V++SGF  ++  GSAL+DMYA
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYA 188

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           KSGS++DA Q F +MP+RN VSWN++I+ CAQ+G     +  FE M+Q+G +P+ +S + 
Sbjct: 189 KSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVG 248

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+ EG  YFN MTQ Y + P   HY  M+D+L R+GC DEAE  +  MP E
Sbjct: 249 VLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVE 308

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD  +W +++ +CRIH N E AK+ A+ L  ME ++ A  YV +SNIYA AGQW+  ++V
Sbjct: 309 PDVSVWGALLGACRIHGNTELAKRIAEHLLGME-VQIAGIYVLLSNIYAAAGQWDDAAKV 367

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K M++RGV K   YSW+E+K+ +H F A +  HPQ  EI   +E+L ++MK  GY P+ 
Sbjct: 368 RKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNK 427

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           +  L D +++ K  SL +HSE+LAIAF +INT  G+ I V KNLR C DCH  IK IS  
Sbjct: 428 NFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLN 487

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             R+I VRD++RFHHFKDG CSC D+W
Sbjct: 488 FTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 168/346 (48%), Gaps = 33/346 (9%)

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G KP+ FT +  + A   +A +  G+Q H +++K  F  +V V  AL+ +Y++   + +A
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 229 R-------------------------------KLFGEMPEVDGVSYNVMITCYAWNEQYK 257
                                           KLF EM E D VS+  +I  YA N    
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           ESL +F +++ T     +F   ++LS  A+   L++GRQ H   + +    ++ V ++LV
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMYAK G  E+A ++F  +   + V W ++I+   Q G   +A+ LF +M +A I  ++ 
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 378 TFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +F  +L A +    ++ G+   + + ++ G + +V   + ++D+  ++G L +A      
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 437 MP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           MP E ++  W AL+ AC  +G+ +   +  E ++    Q   + +L
Sbjct: 305 MPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVL 350



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 157/326 (48%), Gaps = 33/326 (10%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+  T +T++  C+   +  +  Q H  IIK G+ S +++  +LV  Y +   L+ A
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 128 RRVFK-------------------------------EMPQKDSVSFNALITGFAKEGLNE 156
             VF                                EM ++D VS+ A+I G+A+ G  +
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
           E++ +F +M+  G K   F   + LSA   LA + LGRQ HA+VV++ F  ++ V +AL+
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+Y+K   + +A ++F +MP+ + VS+N +IT  A + +  +++ LF ++       ++ 
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 277 PFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
            F  +LS  ++   +  GR   +  T     + +V     ++D+  + G  +EA+     
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 336 LSHISTVP-WTAMISAYVQKGNLEEA 360
           +     V  W A++ A    GN E A
Sbjct: 305 MPVEPDVSVWGALLGACRIHGNTELA 330



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 2/237 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++T + N +I+G+ ++ ++  A +LF  M +R  VSWT +I GY+Q     E+  +F
Sbjct: 71  MSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVF 130

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR  G    D     ++LS C++        Q HA +++ G+   +++ ++LVD Y K
Sbjct: 131 NQMRKTG-MKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAK 189

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A +VF +MPQ++ VS+N++ITG A+ G   +A+ LF +M   G KP++ +F   
Sbjct: 190 SGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGV 249

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           LSA      +  GR     + +    V +V     ++DL  +  C+ EA      MP
Sbjct: 250 LSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP 306



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 118/224 (52%), Gaps = 35/224 (15%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  +Q T +++++A A +ASL  GKQ H+++I+ GF S+V   +AL+ MYA+ GS
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 427 LKD-------------------------------AIQTFKEMPERNIVSWNALISACAQN 455
           L+D                               A++ F EM ER++VSW A+I+  AQN
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK-YKLRPKKE 514
           G    +L  F  M ++G + D   + SVLSAC+    +E G Q+   + Q  + L     
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
             +++VD+  +SG  ++A ++  +MP + +E+ W+S+I  C  H
Sbjct: 181 --SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQH 221


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/641 (37%), Positives = 376/641 (58%), Gaps = 17/641 (2%)

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           +  N ++ S+     + LAR  F   P+KD+VS+N ++  + + G  EEA  LF      
Sbjct: 7   VTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW 66

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
                  ++ A +S  V    ++  R++   +   + V      N ++  Y++   +VEA
Sbjct: 67  DV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVS----WNIMVSGYARRGDMVEA 118

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R+LF   P  D  ++  +++ YA N   +E+ ++F  +     +R+   ++ +++    +
Sbjct: 119 RRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQR 174

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             +   +++          S     N+++  YA+ G  EEAK +F  +     V W AM+
Sbjct: 175 RMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 230

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           +AY Q G  EE L LFIEM R     +++ FA +L   A++A+L  G QLH  +IR+G+ 
Sbjct: 231 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 290

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
              F G+ALL MY K G+++DA   F+EM ER++VSWN +I+  A++G  +  L+ F+ M
Sbjct: 291 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 350

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
             +  +PD ++L+ VL+ACSH GL+E+G+ YF SM   + +  K EHY  M+D+L R+G 
Sbjct: 351 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 410

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
             EA  LM  MPFEPD  MW +++ + RIH+N E  + AA+++F++E   +A  YV +SN
Sbjct: 411 LAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP-ENAGMYVLLSN 469

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           IYA +G+W    +++  M ERGV+KV  +SW+E+++KVH F+A D +HP+  +I   +E+
Sbjct: 470 IYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLED 529

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           L   MKK GY   T   LHD +EE K   LKYHSE+LA+A+ ++N P G PI V+KNLR 
Sbjct: 530 LDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRV 589

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH A K IS I GR I +RDS+RFHHF+ G CSC D+W
Sbjct: 590 CGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 186/378 (49%), Gaps = 40/378 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +S N L+SGYV+ G ++ ARELF+ M  R  VSW I++ GY+++    EA +LF    
Sbjct: 67  DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---- 122

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYNSI-------------- 107
            D     D  T+  ++SG ++     E  +V   + +     +N++              
Sbjct: 123 -DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 181

Query: 108 ----LIIC------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
               ++ C      N+++  Y +   L+ A+ VF  MPQKD+VS+ A++  +++ G +EE
Sbjct: 182 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 241

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
            ++LF+EM   G   +   FA  LS    +A +  G Q+H  +++  +    FV NALL 
Sbjct: 242 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 301

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   + +AR  F EM E D VS+N MI  YA +   KE+L++F  ++ T        
Sbjct: 302 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 361

Query: 278 FSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
              +L+  ++   ++ G      +H    VT   ++ +    ++D+  + GR  EA ++ 
Sbjct: 362 LVGVLAACSHSGLVEKGISYFYSMHHDFGVT---AKPEHYTCMIDLLGRAGRLAEAHDLM 418

Query: 334 ANLS-HISTVPWTAMISA 350
            ++     +  W A++ A
Sbjct: 419 KDMPFEPDSTMWGALLGA 436


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/747 (33%), Positives = 420/747 (56%), Gaps = 4/747 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   NM+I  Y K  +   AR++F+ +  R A SW+IL+  Y Q   ++EA +++ +M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
               S  D  T +++L+ C++     E   V     + G+   +++  SL+  + K  CL
Sbjct: 61  RKEIS-IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 125 DLARRVFKEM-PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + A  VF+ M   +D +S  A+I  + + G N+ A+  + +M+  G +P  FT+AA L A
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+ +H  ++++    N+ V NAL+ +Y+K   + +++ LF  M   D VS+
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  Y      K++  LF  +         + FS++L   A+   L+ GR +H +   
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  + N+L+ M+ +CG  E A+  F ++       W  M++AY Q    ++AL L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           +  M     + D+ TF+S++ + A L +L  GK +H      GF  +V  G+AL++MYAK
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAK 419

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            GSL DA ++F  +  +++VSW+A+I+A AQ+G A+  L+    M   G   + V+  SV
Sbjct: 420 CGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSV 479

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L ACSH G + EG+ YF  ++Q + +   +E+    +D+L R+G   EAE ++  MPF+ 
Sbjct: 480 LHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKV 539

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
             +   +++  C++H ++   K    ++  +E   +   YV ++N+YA AG+W+ V++++
Sbjct: 540 SFVALVTLLGGCKVHGDVRRGKALTKRIVALEP-ENPGSYVLLNNMYAAAGRWDDVAKLR 598

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK-KEGYKPDT 662
           + MR++GV++ T  S +E + K++ F+  D  +P+  EIR ++E L   MK +EGY PDT
Sbjct: 599 RYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDT 658

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
               HD  ++ K E LK+HSE++A+ F LI +P GS + ++KNLR C+DCH   KL SKI
Sbjct: 659 RDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKI 718

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
           TGR I VRD +RFHHF+ G CSC D+W
Sbjct: 719 TGRRIIVRDGTRFHHFEGGICSCGDYW 745


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/645 (38%), Positives = 378/645 (58%), Gaps = 31/645 (4%)

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P + + S+   +    +     EAI  ++EM   G +P +F F A L A  GL D+  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 195 QVHAFVVKTNFV---------------------ENVFVANALLDLYSKHDCVVEARKLFG 233
           Q+HA  VK  +                      +  F  NAL+ +Y+K   V +++ LF 
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
              + D VS+N MI+ ++ ++++ E+L  FR +     +      +++L   ++   L +
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 294 GRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           G++IH   +    + E   V ++LVDMY  C + E  + +F ++       W AMIS Y 
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292

Query: 353 QKGNLEEALNLFIEMCR-ANISADQATFASILRASAE-LASLSLGKQLHSFVIRSGFMSN 410
           + G  E+AL LFIEM + A +  +  T AS++ A    LA+++ GK++H++ IR+   S+
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV- 469
           +  GSAL+DMYAK G L  + + F EMP +N+++WN LI AC  +G  +  L+ F++MV 
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 470 QSGY----QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           ++G     +P+ V+ ++V +ACSH GLI EGL  F  M   + + P  +HYA +VD+L R
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 472

Query: 526 SGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           +G  +EA +L+  MP E D++  WSS++ +CRIH+N+E  + AA  L  +E    A+ YV
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP-NVASHYV 531

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            +SNIY+ AG W    +V+K MR+ GV+K    SW+E + +VH F A D  HPQ+ ++  
Sbjct: 532 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 591

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
            +E L ++M+KEGY PDTSC LH+ DE+ K   L  HSE+LAIAF ++NTP G+ I V K
Sbjct: 592 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 651

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCHAA K ISKI  REI VRD  RFHHFK+G CSC D+W
Sbjct: 652 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 203/377 (53%), Gaps = 38/377 (10%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T + N L++ Y K G +  ++ LF S VDR  VSW  +I  +SQ ++F EA   F  M  
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 207

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILI----ICNSLVDSYCKI 121
           + G + D VT A++L  CS  +  +   ++HA +++   N+ LI    + ++LVD YC  
Sbjct: 208 E-GVELDGVTIASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNC 263

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAA 180
           R ++  RRVF  +  +    +NA+I+G+A+ GL+E+A+ LF+EM  + G  P+  T A+ 
Sbjct: 264 RQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 323

Query: 181 LSAGV-GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           + A V  LA IA G+++HA+ ++     ++ V +AL+D+Y+K  C+  +R++F EMP  +
Sbjct: 324 MPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 383

Query: 240 GVSYNVMITCYAWNEQYKESLKLFREL-----QFTRFDRSQFPFSTLLSVVANKLDLQIG 294
            +++NV+I     + + +E+L+LF+ +     +      ++  F T+ +  ++   +  G
Sbjct: 384 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 443

Query: 295 -----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP------ 343
                R  H   +  T+     V    VD+  + G+ EEA E+      ++T+P      
Sbjct: 444 LNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEEAYEL------VNTMPAEFDKV 493

Query: 344 --WTAMISAYVQKGNLE 358
             W++++ A     N+E
Sbjct: 494 GAWSSLLGACRIHQNVE 510



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 249/536 (46%), Gaps = 45/536 (8%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R+  SW   +   ++ N FREA   +++M T  G+ PD   F  +L   S         Q
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEM-TVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 95  VHADIIKFGY-NSILIICNSLVDSY--------------------CKIRCLDLARRVFKE 133
           +HA  +KFGY +S + + N+LV+ Y                     K+  +D ++ +F+ 
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFES 173

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
              +D VS+N +I+ F++     EA+  F  M   G +    T A+ L A   L  + +G
Sbjct: 174 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 194 RQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           +++HA+V++ N  +EN FV +AL+D+Y     V   R++F  +       +N MI+ YA 
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 253 NEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAISEV 310
           N   +++L LF E+ +      +    ++++    + L  +  G++IH   I     S++
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDI 353

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR- 369
            V ++LVDMYAKCG    ++ +F  + + + + W  +I A    G  EEAL LF  M   
Sbjct: 354 TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 413

Query: 370 ----ANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKS 424
                    ++ TF ++  A +    +S G  L +      G        + ++D+  ++
Sbjct: 414 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 425 GSLKDAIQTFKEMPER--NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           G L++A +    MP     + +W++L+ AC  + + +    + ++++    +P+  S   
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH--LEPNVASHYV 531

Query: 483 VLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +LS   S  GL  + ++   +M Q   +  KKE   S ++        DE  K MA
Sbjct: 532 LLSNIYSSAGLWNKAMEVRKNMRQ---MGVKKEPGCSWIEFR------DEVHKFMA 578



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 8/247 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+   + L+  Y     + + R +F+ ++ R    W  +I GY++     +A  LF++M
Sbjct: 248 ENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEM 307

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
               G  P+  T A+++  C     A  +  ++HA  I+    S + + ++LVD Y K  
Sbjct: 308 IKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCG 367

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-----QHLGFKPSDFTF 177
           CL+L+RRVF EMP K+ +++N LI      G  EEA++LF  M     +    KP++ TF
Sbjct: 368 CLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTF 427

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMP 236
               +A      I+ G  +   +   + VE      A ++DL  +   + EA +L   MP
Sbjct: 428 ITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMP 487

Query: 237 -EVDGVS 242
            E D V 
Sbjct: 488 AEFDKVG 494



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 18/185 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA---------VSWTILIGGYSQKN 51
           MPN+N ++ N+LI      G    A ELF +MV             V++  +    S   
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438

Query: 52  QFREAFKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELIQ-VHADIIKFG-YNS 106
              E   LF  M+ D G +P    Y     LL    + + A EL+  + A+  K G ++S
Sbjct: 439 LISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 498

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
           +L  C      +  +   ++A +    +    +  +  L   ++  GL  +A+++   M+
Sbjct: 499 LLGACR----IHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 554

Query: 167 HLGFK 171
            +G K
Sbjct: 555 QMGVK 559


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/648 (37%), Positives = 382/648 (58%), Gaps = 46/648 (7%)

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           DS  F   I     +    EA++L   ++    KP    +   L   +    +  G+QVH
Sbjct: 87  DSKLFKEAIDILCGQSRLREAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVH 142

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
           A + KT+    ++++N LLD+Y+K   +V+A K+F EM   D  S+N+MI+ Y     ++
Sbjct: 143 AHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFE 201

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLS--VVANKLD------------------------- 290
           ++  LF ++     +R  F ++ ++S  V  N+ +                         
Sbjct: 202 KARNLFDKMP----NRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSA 257

Query: 291 ---------LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
                    L +G++IH   +     S+  V  SL+DMY KCG  EEA+ IF  +     
Sbjct: 258 LAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDV 317

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V WT MI  Y++ G  EE   LF  +  +NI  +  TFA +L A A+LA+  LGKQ+H++
Sbjct: 318 VSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAY 377

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           ++R GF S   + SAL+ MY+K G +++A   F+ +P+ ++ SW +L+   AQ+G     
Sbjct: 378 MVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKA 437

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           L  FE +++SG +PD ++ + VLSAC+H GL+++GL+YF+S+ +K+ L    +HYA ++D
Sbjct: 438 LHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIID 497

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +L R+G F EAE ++ +MP +PD+ +W++++  CRIH NLE AK+AA  LF++E   + A
Sbjct: 498 LLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEP-ENPA 556

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
            YV ++NIYA AG     + +++ M  RG+ K    SW+E++ +VHVF+  D  HP++ E
Sbjct: 557 TYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKE 616

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           I   +  L + MK+ GY PDT+  LHD + E K E+L YHSE+LA+AF +I+TP G+PI 
Sbjct: 617 ILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIK 676

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V KNLR C DCH AIK IS ITGR+I VRDS+RFH F+ G CSC+D+W
Sbjct: 677 VFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 225/491 (45%), Gaps = 48/491 (9%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+Q  +   +++      G  A    L +S + + A+   IL G    +++ REA +L  
Sbjct: 63  PSQTHIGKKIILF----DGKDAYINRLCDSKLFKEAID--ILCG----QSRLREAVQLLY 112

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII---------CN 112
            +       P    + TLL  C +     E  QVHA I   G   + I          C 
Sbjct: 113 RIEK-----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIGLYISNRLLDMYAKCG 167

Query: 113 SLVDS---------------------YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           SLVD+                     Y K    + AR +F +MP +D+ S+ A+I+G  +
Sbjct: 168 SLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQ 227

Query: 152 EGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
               EEA++L+  MQ H   K +  T ++AL+A   +  + +G+++H  +++     +  
Sbjct: 228 HNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEV 287

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V  +LLD+Y K   + EAR +F +M E D VS+  MI  Y  N + +E   LFR L  + 
Sbjct: 288 VWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSN 347

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              + F F+ +L+  A+     +G+QIH   +     S    A++LV MY+KCG  E AK
Sbjct: 348 IMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAK 407

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  L       WT+++  Y Q G  ++AL+ F  + ++    D   F  +L A A   
Sbjct: 408 SVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAG 467

Query: 391 SLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G +  HS   + G    +   + ++D+ A++G   +A     EMP + +   W AL
Sbjct: 468 LVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAAL 527

Query: 449 ISACAQNGDAQ 459
           +  C  +G+ +
Sbjct: 528 LGGCRIHGNLE 538



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 8/365 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++  S N++ISGYVK GN   AR LF+ M +R   SWT +I G  Q N+  EA +L+
Sbjct: 179 MVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELY 238

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+    S  +  T ++ L+  +   + +   ++H  I++ G +S  ++  SL+D Y K
Sbjct: 239 RLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGK 298

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR +F +M ++D VS+  +I  + K G  EE   LF  + +    P+DFTFA  
Sbjct: 299 CGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGV 358

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   LA   LG+Q+HA++V+  F      A+AL+ +YSK   +  A+ +F  +P+ D 
Sbjct: 359 LNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDL 418

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KLDLQIGRQ 296
            S+  ++  YA + Q+ ++L  F  L  +        F  +LS  A+       L+    
Sbjct: 419 FSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHS 478

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           I  +  +T  I        ++D+ A+ G+F EA+ I   +        W A++      G
Sbjct: 479 IKEKHGLTRTIDHYAC---IIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHG 535

Query: 356 NLEEA 360
           NLE A
Sbjct: 536 NLELA 540


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/744 (36%), Positives = 422/744 (56%), Gaps = 9/744 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            VST  LI+ Y K G+L  AR++FN M +R  VSWT +I GY Q    +EAF LF  +  
Sbjct: 188 NVST-ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKL-I 245

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G+ P+ V+FA++L  C+ P+   + +++HA I + G    +++ N+L+  Y +   L 
Sbjct: 246 RSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLA 305

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR+VF  +   + VS+NA+I G+  EG  EEA +LF +MQ  GF+P  FT+A+ L+   
Sbjct: 306 NARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICA 364

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             AD+  G+++H+ +V+T +  +V VA AL+ +Y+K   + EARK+F +MPE + VS+N 
Sbjct: 365 DRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNA 424

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            I C   +   KE+ ++F++++          F TLL+   +  D + GR IH +     
Sbjct: 425 FIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWG 484

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            +S   VAN+L+ MY +CG+  +A+E+F  +       W AMI+AYVQ G    A +LFI
Sbjct: 485 MLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFI 544

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +        D+ TF ++LRA A L  L  G+++H  V ++G   ++   + L+ MY+K G
Sbjct: 545 KYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCG 604

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL+DA   FK + E+++V WNA+++A   +   Q  LK F+ M   G  PDS +  SVL+
Sbjct: 605 SLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLN 664

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+  G IE G + F++  ++  +     HYA MV  L R+    EAE+ + ++  E D 
Sbjct: 665 ACARLGAIEHG-KKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDA 723

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           +MW S++ +CRIH N+  A+ A + L  ++     A    + NIYA AG+WE VS +K  
Sbjct: 724 LMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKAT 783

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           MRE G+    + + +E+ S+ H F  N    PQ   +  KIE L+ +M  +G+  D   A
Sbjct: 784 MREAGLLAPKSCT-IEVNSEFHTFMTN-HFSPQIG-VEDKIEELVWKMMDKGFLLDPHYA 840

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
            +D  E+ ++ S  +  E LA+A+ L +TP G  +  + +       H  +K ISK   R
Sbjct: 841 PNDSREKERLFS--HCPELLAVAYGLEHTPPGVLVRCVTDSPVTDPSHRMLKFISKAYNR 898

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRD + FH+FKDG CSC D+W
Sbjct: 899 GIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 187/612 (30%), Positives = 324/612 (52%), Gaps = 37/612 (6%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            NMLIS Y K G++  A  +F SM D+  VSW  +I GY+   + +EA  LF  M+ +G 
Sbjct: 89  NNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREG- 147

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  +F ++LS C  P       Q+H+ I K GY S + +  +L++ YCK   L+LAR
Sbjct: 148 LKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELAR 207

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF EM +++ VS+ A+I+G+ + G ++EA  LF ++   G +P+  +FA+ L A     
Sbjct: 208 KVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPN 267

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+  G ++HA++ +    + V V NAL+ +Y++   +  AR++F  +   + VS+N MI 
Sbjct: 268 DLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIA 327

Query: 249 CYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            Y   E + +E+ +LFR++Q   F   +F +++LL++ A++ DL  G+++H+Q + T   
Sbjct: 328 GYG--EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWE 385

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++V VA +L+ MYAKCG  EEA+++F  +   + V W A I+   + G+ +EA  +F +M
Sbjct: 386 ADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQM 445

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R ++  D  TF ++L +         G+ +H  + + G +SN    +AL+ MY + G L
Sbjct: 446 RRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKL 505

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            DA + F  +  R++ SWNA+I+A  Q+G   +    F      G + D  + ++VL A 
Sbjct: 506 ADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAI 565

Query: 488 SHC----------GLIEEG-----LQYFNSMTQKY-KLRPKKEHYASM-----VDILCRS 526
           ++           GL+E+      ++   ++ + Y K    ++ Y+        D++C +
Sbjct: 566 ANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWN 625

Query: 527 GCF---------DEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
                        +A KL  QM  E   PD   ++SV+N+C     +E  KK   QL + 
Sbjct: 626 AMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEA 685

Query: 575 EKLRDAAPYVAM 586
               D   Y  M
Sbjct: 686 AMETDTRHYACM 697



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 264/477 (55%), Gaps = 3/477 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A  L  C +  +  E  +VH  +    +   + + N L+  Y K   ++ A  VF+ M 
Sbjct: 54  YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSME 113

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            KD VS+NA+I+G+A  G  +EA+ LF +MQ  G KP+  +F + LSA      +  G Q
Sbjct: 114 DKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQ 173

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H+ + K  +  +V V+ AL+++Y K   +  ARK+F EM E + VS+  MI+ Y  +  
Sbjct: 174 IHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 233

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            KE+  LF++L  +    ++  F+++L    N  DL+ G ++H          EV V N+
Sbjct: 234 SKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNA 293

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ MYA+CG    A+++F NL   + V W AMI+ Y + G +EEA  LF +M +     D
Sbjct: 294 LISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPD 352

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + T+AS+L   A+ A L+ GK+LHS ++R+ + ++V   +AL+ MYAK GSL++A + F 
Sbjct: 353 RFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFN 412

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           +MPE+N VSWNA I+ C ++G  +   + F+ M +    PD V+ +++L++C+     E 
Sbjct: 413 QMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFER 472

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G +Y +    ++ +        +++ +  R G   +A ++  ++    D   W+++I
Sbjct: 473 G-RYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMI 527



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 236/450 (52%), Gaps = 3/450 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q  +  N LIS Y + G+LA AR++F+++     VSW  +I GY +     EAF+LF DM
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDM 344

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +   G  PD  T+A+LL+ C++    N   ++H+ I++  + + + +  +L+  Y K   
Sbjct: 345 QQK-GFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGS 403

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ AR+VF +MP+K++VS+NA I    + G  +EA ++F +M+     P   TF   L++
Sbjct: 404 LEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNS 463

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                D   GR +H  + +   + N  VANAL+ +Y +   + +AR++F  +   D  S+
Sbjct: 464 CTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSW 523

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  Y  +     +  LF + +       ++ F  +L  +AN  DL  GR+IH     
Sbjct: 524 NAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEK 583

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                ++++  +L+ MY+KCG   +A  +F N+     V W AM++AY    + ++AL L
Sbjct: 584 AGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKL 643

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F +M    ++ D AT+ S+L A A L ++  GK+ H+ +  +   ++    + ++    +
Sbjct: 644 FQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGR 703

Query: 424 SGSLKDA-IQTFKEMPERNIVSWNALISAC 452
           +  LK+A     +   E + + W +L+ AC
Sbjct: 704 ASLLKEAEEFIEEISSESDALMWESLLVAC 733



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 217/406 (53%), Gaps = 7/406 (1%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A  L   V    +A G++VH  +    F  ++++ N L+ +YSK   + +A  +F  M 
Sbjct: 54  YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSME 113

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + D VS+N MI+ YA + + +E++ LF ++Q      +Q  F ++LS     + L+ G Q
Sbjct: 114 DKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQ 173

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH+        S+V V+ +L++MY KCG  E A+++F  +   + V WTAMIS YVQ G+
Sbjct: 174 IHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 233

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            +EA  LF ++ R+    ++ +FASIL A      L  G +LH+++ ++G    V  G+A
Sbjct: 234 SKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNA 293

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MYA+ GSL +A Q F  +   N VSWNA+I+   + G  +   + F DM Q G+QPD
Sbjct: 294 LISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPD 352

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             +  S+L+ C+    +  G +  +S   +           +++ +  + G  +EA K+ 
Sbjct: 353 RFTYASLLAICADRADLNRGKE-LHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            QMP E + + W++ I  C  H     ++K A Q+FK  +  D  P
Sbjct: 412 NQMP-EKNAVSWNAFIACCCRHG----SEKEAFQVFKQMRRDDVIP 452



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 103/186 (55%), Gaps = 2/186 (1%)

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  + A+   +A  L+   +  SL+ GK++H  +  + F  +++  + L+ MY+K GS++
Sbjct: 44  KRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE 103

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F+ M ++++VSWNA+IS  A +G  Q  +  F  M + G +P+  S +S+LSAC 
Sbjct: 104 DANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              ++E G Q  + +T K           +++++ C+ G  + A K+  +M  E + + W
Sbjct: 164 TPIVLEFGEQIHSHIT-KAGYESDVNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSW 221

Query: 549 SSVINS 554
           +++I+ 
Sbjct: 222 TAMISG 227



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 9/198 (4%)

Query: 423 KSGSLKDAIQTF-KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           K  S++  +Q   K   + N+  +   +  C Q        K  + M  + ++PD     
Sbjct: 31  KGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNN 90

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            ++S  S CG IE+    F SM  K  +      + +M+      G   EA  L  QM  
Sbjct: 91  MLISMYSKCGSIEDANNVFQSMEDKDVVS-----WNAMISGYALHGRGQEAVDLFYQMQR 145

Query: 542 E---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           E   P++  + S++++C+    LEF ++    + K     D     A+ N+Y   G  E 
Sbjct: 146 EGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLEL 205

Query: 599 VSQVKKAMRERGVRKVTA 616
             +V   MRER V   TA
Sbjct: 206 ARKVFNEMRERNVVSWTA 223


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 275/767 (35%), Positives = 409/767 (53%), Gaps = 116/767 (15%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCK-------------IRCLD---------------- 125
           VHA +I  G+     I N L+D YCK             IR  D                
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 126 --LARRVFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             LAR +F   P   +D+V +NA+ITG++       AI+LF ++   GF+P +FTF + L
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156

Query: 182 SA-GVGLADIALGRQVHAFVVKTN--FVENVFVANALLDLYSK---------HDCVVEAR 229
            A  + + D    +Q+H  VVK+   FV +V   NALL ++ K            +  AR
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVL--NALLSVFVKCASSPLVSSSSLMAAAR 214

Query: 230 KLFGEMPEVDGVSYNVMITCY----------------------AWNEQ---------YKE 258
           KLF EM E D +S+  MI  Y                      AWN           + E
Sbjct: 215 KLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLE 274

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV----KVAN 314
           +L++FR++        +F ++++LS  AN      G+Q+H   + T     +     V N
Sbjct: 275 ALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNN 334

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI-- 372
           +L  +Y KCG+ +EA+++F  +     V W A++S YV  G ++EA + F EM   N+  
Sbjct: 335 ALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLT 394

Query: 373 ------------------------------SADQATFASILRASAELASLSLGKQLHSFV 402
                                           D A FA  + A A LA+L  G+QLH+ +
Sbjct: 395 WTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYA-FAGAIIACAWLAALMHGRQLHAQL 453

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           +R GF S++ +G+AL+ MYAK G ++ A   F  MP  + VSWNA+I+A  Q+G     L
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQAL 513

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           + FE M++    PD ++ L+VLS CSH GL+EEG +YF SM+  Y + P ++HYA M+D+
Sbjct: 514 ELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDL 573

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           LCR+G F EA+ ++  MP EP   +W +++  CRIH N++   +AA++LF++    D   
Sbjct: 574 LCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGT- 632

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           YV +SN+YA  G+W+ V++V+K MR++GV+K    SW+E+++KVHVF  +D +HP+   +
Sbjct: 633 YVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAV 692

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
              +E L  +M+K GY PDT   LHD + E K   L  HSE+LA+ F L+  P G+ + V
Sbjct: 693 YNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRV 752

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            KNLR C DCH A K +SK+  REI VRD  RFHHFK+G CSC ++W
Sbjct: 753 FKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 241/559 (43%), Gaps = 116/559 (20%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++TV  N +I+GY  + +   A ELF  ++                +N FR         
Sbjct: 112 RDTVCYNAMITGYSHNNDGFGAIELFRDLL----------------RNGFR--------- 146

Query: 64  RTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCK-- 120
                  PD  TF ++L   +   +   +  Q+H  ++K G   +  + N+L+  + K  
Sbjct: 147 -------PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCA 199

Query: 121 -------IRCLDLARRVFKEMPQKDS-------------------------------VSF 142
                     +  AR++F EM ++D                                V++
Sbjct: 200 SSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAW 259

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           NA+I+G+   G   EA+++F +M  LG +  +FT+ + LSA         G+QVHA++++
Sbjct: 260 NAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILR 319

Query: 203 T----NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN-------------- 244
           T    +   ++ V NAL  LY K   V EAR++F +MP  D VS+N              
Sbjct: 320 TEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDE 379

Query: 245 -----------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
                            VMI+  A N   +ESLKLF  ++   F+   + F+  +   A 
Sbjct: 380 AKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAW 439

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L  GRQ+H Q +     S +   N+L+ MYAKCG  E A  +F  + ++ +V W AM
Sbjct: 440 LAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAM 499

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+A  Q G+  +AL LF  M + +I  D+ TF ++L   +    +  G   H +      
Sbjct: 500 IAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSG 556

Query: 408 MSNVFSG----SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
           +  +  G    + ++D+  ++G   +A    + MP E     W AL++ C  +G+    +
Sbjct: 557 LYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616

Query: 463 KSFEDMVQSGYQPDSVSLL 481
           ++ E + +   Q D   +L
Sbjct: 617 QAAERLFELMPQHDGTYVL 635



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 189/395 (47%), Gaps = 38/395 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ +S   +I+GYV++G L  AR+  + M ++  V+W  +I GY     F EA ++F
Sbjct: 220 MTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMF 279

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF----GYNSILIICNSLVD 116
             M    G   D  T+ ++LS C+         QVHA I++       +  L + N+L  
Sbjct: 280 RKMYLL-GIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALAT 338

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNA-------------------------------L 145
            Y K   +D AR+VF +MP KD VS+NA                               +
Sbjct: 339 LYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVM 398

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           I+G A+ G  EE++KLF  M+  GF+P D+ FA A+ A   LA +  GRQ+HA +V+  F
Sbjct: 399 ISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGF 458

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             ++   NAL+ +Y+K   V  A  LF  MP +D VS+N MI     +    ++L+LF  
Sbjct: 459 DSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFEL 518

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           +        +  F T+LS  ++   ++ G R   + + +            ++D+  + G
Sbjct: 519 MLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAG 578

Query: 325 RFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           +F EAK++   +      P W A+++     GN++
Sbjct: 579 KFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMD 613



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 215/525 (40%), Gaps = 111/525 (21%)

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM--PEV---------- 238
           ++ R VHA ++ + F    ++ N L+D+Y K   +V A  LF E+  P++          
Sbjct: 32  SIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAH 91

Query: 239 ---------------------DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                                D V YN MIT Y+ N     +++LFR+L    F    F 
Sbjct: 92  SSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFT 151

Query: 278 FSTLLSVVANKL-DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC------------- 323
           F+++L  +A  + D +  +QIH   + + +     V N+L+ ++ KC             
Sbjct: 152 FTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211

Query: 324 ---------------------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
                                      G  + A++    ++    V W AMIS YV  G 
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG---------- 406
             EAL +F +M    I  D+ T+ S+L A A       GKQ+H++++R+           
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331

Query: 407 -------------------------FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
                                     + ++ S +A+L  Y  +G + +A   F+EMPERN
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERN 391

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           +++W  +IS  AQNG  + +LK F  M   G++P   +    + AC+    +  G Q  +
Sbjct: 392 LLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQ-LH 450

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           +   +           +++ +  + G  + A  L   MP+  D + W+++I +   H + 
Sbjct: 451 AQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGHG 509

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
             A +  + + K + L D   ++ + +  + AG  E   +  K+M
Sbjct: 510 AQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSM 554



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 145/366 (39%), Gaps = 84/366 (22%)

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK------------------------ 322
           N +   I R +H   I +       + N L+D+Y K                        
Sbjct: 27  NPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTT 86

Query: 323 -------CGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
                   G    A+EIF    L    TV + AMI+ Y    +   A+ LF ++ R    
Sbjct: 87  LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146

Query: 374 ADQATFASILRASAELA-SLSLGKQLHSFVIR--SGFMSNV------------------- 411
            D  TF S+L A A +       +Q+H  V++  SGF+++V                   
Sbjct: 147 PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSS 206

Query: 412 -------------------FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
                               S + ++  Y ++G L  A Q    M E+ +V+WNA+IS  
Sbjct: 207 SSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGY 266

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             +G     L+ F  M   G Q D  +  SVLSAC++ G    G Q  ++   + + RP 
Sbjct: 267 VHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQ-VHAYILRTEPRPS 325

Query: 513 KEHYASMVDILC----RSGCFDEAEKLMAQMPFEPDEIMWSSV----INSCRIHKNLEFA 564
            +   S+ + L     + G  DEA ++  QMP + D + W+++    +N+ RI +   F 
Sbjct: 326 LDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAKSFF 384

Query: 565 KKAADQ 570
           ++  ++
Sbjct: 385 EEMPER 390


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/767 (35%), Positives = 429/767 (55%), Gaps = 26/767 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +N+V  N LIS Y K G+L  A++ F+ +     R  V+W  +I  + +    REA +LF
Sbjct: 174 ENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLF 233

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDSY 118
            DM  DG   P+ VTF ++L  C E    +  ++  +H  I+  G      +  +LVDSY
Sbjct: 234 RDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSY 293

Query: 119 CKIRCLDLARRVF----KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
            K+  LD A  VF     E P    V+ +A+I+   + G  +E+++LF  M   G KPS 
Sbjct: 294 GKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSG 353

Query: 175 FTFAAALSA----GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            T  + L+A     VG A   +  Q    V  T   +NV     LL  Y++ + +  AR 
Sbjct: 354 VTLVSVLNACSMLQVGSATAFVLEQAMEVVSATR--DNVL-GTTLLTTYARSNDLPRARA 410

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA---N 287
            F  +   D VS+N M   Y  + + +E+L LF  +       S   F T L+  A    
Sbjct: 411 TFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPP 470

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS--HISTVPWT 345
           +    IG++I +         +  VAN+ ++MYAKCG   +A+ +F  +S      + W 
Sbjct: 471 QTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWN 530

Query: 346 AMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           +M++AY   G  +EA  LF  M     +  ++ TF ++L AS    S++ G+++H+ V+ 
Sbjct: 531 SMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVS 590

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATL 462
           +GF S+    +ALL+MYAK GSL DA   F +    + ++++W +LI+  AQ G A+  L
Sbjct: 591 NGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERAL 650

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           K F  M Q G +P+ V+ +S L+AC+H G +E+G +  + MT  + + P  +H++ +VD+
Sbjct: 651 KLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDL 710

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R G  DEAEKL+ +   + D I W +++++C+  K LE  ++ A+++ +++    A+ 
Sbjct: 711 LGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDP-EVASS 768

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           Y+ ++++YA AG+W   + ++K M ++G+R     S VE+  ++H F+A D+ HP++ EI
Sbjct: 769 YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 828

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
             ++E L   +K  GY  DT   LHD  +E K   L  HSE+LAIAF L++TP GSP+ V
Sbjct: 829 YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 888

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C+DCH A KLISK+TGR+I +RDSSR+HHF  G CSC D+W
Sbjct: 889 IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 236/503 (46%), Gaps = 39/503 (7%)

Query: 75  TFATLLSGCSEPDTANELIQVHADII--KFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           T+  LL  C       +  ++HA I+  +   ++   + + L+  + K  C +LA     
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAK--CGNLAEAEAL 102

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
                   S  A+I  + + G  ++A++LF  M+    +P+     A ++A   L ++A 
Sbjct: 103 ADRFASVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV---DGVSYNVMITC 249
           GR++H+ +   +F EN  + NAL+ +YSK   +++A++ F  +P     D V++N MI+ 
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFP------FSTLLS--VVANKLDLQIGRQIHTQT 301
           +  N   +E+L+LFR++     DR   P      F ++L   V A  L L+  R IH + 
Sbjct: 220 FLRNGSAREALQLFRDM-----DRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS----HISTVPWTAMISAYVQKGNL 357
           +      E  V  +LVD Y K G  ++A E+F          S V  +AMISA  Q G  
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWP 334

Query: 358 EEALNLFIEMCRANISADQATFASILRASA--ELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           +E+L LF  M          T  S+L A +  ++ S +      +  + S    NV  G+
Sbjct: 335 QESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVL-GT 393

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            LL  YA+S  L  A  TF  +   ++VSWNA+ +A  Q+  ++  L  FE M+  G +P
Sbjct: 394 TLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRP 453

Query: 476 DSVSLLSVLSACS-----HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
              + ++ L+AC+         I + +Q   S+ ++  L        + +++  + G   
Sbjct: 454 SVATFITALTACAAYPPQTASAIGKRIQ---SLLEEAGLEGDTAVANATLNMYAKCGSLA 510

Query: 531 EAEKLMAQM-PFEPDEIMWSSVI 552
           +A  +  ++ P   D I W+S++
Sbjct: 511 DARAVFERISPARRDCITWNSML 533



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 155/290 (53%), Gaps = 19/290 (6%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI---SEVKVANSLVDMYAKCGRFEEAKEIFA 334
           +  LL        L+ G+++H   I++  I   +   +A+ L+ M+AKCG   EA+ +  
Sbjct: 46  YGCLLQACGRLRALKQGQRLHAH-ILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLS 393
             + + +   TAMI A+++ G  ++A+ LF  M  R N  A      +++ A + L +L+
Sbjct: 105 RFASVYSC--TAMIRAWMEHGRPDKAMELFDRMEVRPNCHA----LIALVNACSCLGNLA 158

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP---ERNIVSWNALIS 450
            G+++HS +    F  N   G+AL+ MY+K GSL DA Q F  +P   +R++V+WNA+IS
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218

Query: 451 ACAQNGDAQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHCGLIE-EGLQYFNSMTQKYK 508
           A  +NG A+  L+ F DM + G   P+SV+ +SVL +C   GL+  E ++  +       
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278

Query: 509 LRPKKEHYASMVDILCRSGCFDEA-EKLMAQMPFEPDE--IMWSSVINSC 555
           +  +     ++VD   + G  D+A E  + +   EP    +  S++I++C
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISAC 328


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/624 (38%), Positives = 364/624 (58%), Gaps = 34/624 (5%)

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +AR +F    +K+ V FN +I  +    L  EA+ +F  M    F P  +TF   L A  
Sbjct: 89  VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GL ++ +G QVH  +VK     N+F+ NAL+ +Y K  C+ EARK+  +MP  D VS+N 
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  YA + Q+ ++L++ +E+     +      ++L  VV                   T
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC-----------------YT 251

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           ++  V+  +++                F  ++  + + W  MI+ YV      EA++LF+
Sbjct: 252 SLENVQYIHNM----------------FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    +  D  T AS+L A  +L++L LG++LH ++ +     N+   +ALLDMYAK G
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            L++A   F +M  R++VSW +++SA  ++G     +  F  M+ SG  PDS++ +SVLS
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+++G  YF  MT++Y + P+ EH+A MVD+  R+G  +EA   + QMP EP+E
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++++CR+H  ++    AAD LF++   + +  YV +SNIYA AG W+ V  V+ A
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAP-KQSGYYVLLSNIYAKAGMWKDVMNVRYA 534

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++ G++KV   S VEL  +VH F A D+ HPQ   I  +++ L+ +MK+ GY P T  A
Sbjct: 535 MKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESA 594

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD + E K   L  HSE+LAI FA++NT +G+PI + KNLR C DCH AIKLISKI  R
Sbjct: 595 LHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSR 654

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRD +RFHHF +G CSC D+W
Sbjct: 655 NIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 220/446 (49%), Gaps = 42/446 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G  + AR +F+  +++  V + ++I  Y   N + EA  +F  M +    +P
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNP 135

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  +L  CS  D     +QVH  I+K G ++ L I N+LV  Y K  CL  AR+V 
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MP +D VS+N+++ G+A+ G  ++A+++  EM  L     D    A+LS         
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN-HDAGTMASLSP-------- 246

Query: 192 LGRQVHAFVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
                   VV    +ENV ++ N                 +F  M + + +S+NVMI  Y
Sbjct: 247 --------VVCYTSLENVQYIHN-----------------MFERMTKKNLISWNVMIAIY 281

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N    E++ LF +++           ++LL    +   L +GR++H           +
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNL 341

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + N+L+DMYAKCG  EEA+++F  +     V WT+M+SAY + G   +A+ LF +M  +
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDS 401

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRS---GFMSNVFSGSALLDMYAKSGSL 427
             + D   F S+L A +    L  G+  H F + +   G +  +   + ++D++ ++G +
Sbjct: 402 GQNPDSIAFVSVLSACSHTGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEV 459

Query: 428 KDAIQTFKEMP-ERNIVSWNALISAC 452
           ++A    K+MP E N   W AL+SAC
Sbjct: 460 EEAYSFIKQMPMEPNERVWGALLSAC 485



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 42/353 (11%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    N L++ Y K G L  AR++ + M  R  VSW  ++ GY+Q  QF +A ++   
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI--- 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                               C E D+ N             +++  +   S V  Y  + 
Sbjct: 226 --------------------CKEMDSLN-----------LNHDAGTMASLSPVVCYTSLE 254

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +     +F+ M +K+ +S+N +I  +    +  EA+ LF++M+  G KP   T A+ L 
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L+ + LGR++H ++ K N   N+ + NALLD+Y+K  C+ EAR +F +M   D VS
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS 374

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQT 301
           +  M++ Y  + Q  +++ LF ++  +  +     F ++LS  ++   L  GR      T
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
                +  ++    +VD++ + G  EEA   ++ +  +   P    W A++SA
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEA---YSFIKQMPMEPNERVWGALLSA 484



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           +A  L+  YS       AR +F    E + V +NVMI  Y  N  Y E+L +F+ +    
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           F+   + F  +L   +   +L++G Q+H   +     + + + N+LV MY KCG   EA+
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++   + +   V W +M++ Y Q G  ++AL +  EM   N++ D  T AS L       
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYT 251

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL   + +H+                                 F+ M ++N++SWN +I+
Sbjct: 252 SLENVQYIHNM--------------------------------FERMTKKNLISWNVMIA 279

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               N      +  F  M + G +PD+V++ S+L AC     +  G +  +   +K  L+
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG-RRLHKYIEKGNLQ 338

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           P      +++D+  + GC +EA  +  +M    D + W+S++++
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 180/383 (46%), Gaps = 42/383 (10%)

Query: 263 FRELQFTRFDRSQ---FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVD 318
           F  L   RFDR +   F       ++     ++   ++H++ ++   +  +  +A  L+ 
Sbjct: 20  FVSLTRIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMR 79

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
            Y+  G    A+ IF      + V +  MI +YV      EAL++F  M     + D  T
Sbjct: 80  AYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYT 139

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F  +L+A + L +L +G Q+H  +++ G  +N+F G+AL+ MY K G L++A +   +MP
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            R++VSWN++++  AQ+G     L+  ++M       D+ ++ S+     +  L  E +Q
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQ 257

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC 555
           Y ++M ++   +     +  M+ I   +   +EA  L  QM     +PD +  +S++ +C
Sbjct: 258 YIHNMFERMT-KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316

Query: 556 ----------RIHKNLE-----------------FAK----KAADQLFKMEKLRDAAPYV 584
                     R+HK +E                 +AK    + A  +F   +LRD   + 
Sbjct: 317 GDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWT 376

Query: 585 AMSNIYAVAGQ-WESVSQVKKAM 606
           +M + Y  +GQ +++V+   K +
Sbjct: 377 SMMSAYGRSGQGYDAVALFAKML 399


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/712 (36%), Positives = 385/712 (54%), Gaps = 75/712 (10%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
            SLV +Y     L  A   F  +P  ++D+V  NA+I+ +A+      A+ +F  +   G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 170 -FKPSDFTFAAALSAGVGLADIALGR--QVHAFVVKTNFVENVFVANALLDLYSK---HD 223
             +P D++F A LSAG  L +I++    Q+H  V+K+     + V NAL+ LY K    +
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 224 CVVEARKLFGEMP----------------------------EVDG---VSYNVMITCYAW 252
              +ARK+  EMP                            EVDG   V +N MI+ Y  
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT----TAIS 308
           +    E+ +LFR +   R    +F F+++LS  AN      G+ +H Q I         +
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS------------------------------- 337
            + V N+LV  Y+KCG    A+ IF N++                               
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           + + + W  M+S YV  G  E+AL LF +M   N+     T+A  + A  EL +L  GKQ
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           LH  +++ GF  +  +G+AL+ MYA+ G++K+A   F  MP  + VSWNA+ISA  Q+G 
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F+ MV  G  PD +S L+VL+AC+H GL++EG +YF SM + + + P ++HY 
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            ++D+L R+G   EA  L+  MPFEP   +W ++++ CR   ++E    AADQLFKM   
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D   Y+ +SN Y+ AG W   ++V+K MR+RGV+K    SW+E  +KVHVF   D  HP
Sbjct: 632 HDGT-YILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHP 690

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
           + +E+ + +E +  +M+K GY PDT   LHD +   K   L  HSERLA+ F L+N P G
Sbjct: 691 EAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPG 750

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + + V+KNLR C DCHAAI  +SK  GREI VRD  RFHHFKDG CSC ++W
Sbjct: 751 ATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 182/395 (46%), Gaps = 38/395 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN++ ++   ++ GYV+ G++  AR +F  +  +  V W  +I GY       EAF+LF
Sbjct: 223 MPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELF 282

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------- 107
             M  +     D  TF ++LS C+          VH  II+   N +             
Sbjct: 283 RRMVLE-RVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVT 341

Query: 108 ----------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
                                 ++  N+++  Y +  CLD A  VF+EMP K+ +S+  +
Sbjct: 342 FYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVM 401

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++G+   G  E+A+KLF +M+    KP D+T+A A++A   L  +  G+Q+H  +V+  F
Sbjct: 402 VSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGF 461

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +    NAL+ +Y++   V EA  +F  MP +D VS+N MI+    +   +E+L+LF  
Sbjct: 462 EGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR 521

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           +        +  F T+L+   +   +  G R   +       I        L+D+  + G
Sbjct: 522 MVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAG 581

Query: 325 RFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           R  EA+++   +    T   W A++S     G++E
Sbjct: 582 RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDME 616


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/683 (38%), Positives = 397/683 (58%), Gaps = 19/683 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L S C     A        +   F YN I       V +Y K   + +AR++F E+P
Sbjct: 49  FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI-------VKAYAKDSKIHIARQLFDEIP 101

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q D+VS+N LI+G+A       A+ LF  M+ LGF+   FT +  ++A     D+   +Q
Sbjct: 102 QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQ 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNE 254
           +H F V   F     V NA +  YSK   + EA  +F  M E+ D VS+N MI  Y  ++
Sbjct: 160 LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ++L L++E+ F  F    F  +++L+ + +   L  GRQ H + I         V +
Sbjct: 220 EGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGS 279

Query: 315 SLVDMYAKCGRFE---EAKEIFANLSHISTVPWTAMISAYVQKGNL-EEALNLFIEMCRA 370
            L+D Y+KCG  +   +++++F  +     V W  MIS Y     L EEA+  F +M R 
Sbjct: 280 GLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI 339

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKD 429
               D  +F  +  A + L+S S  KQ+H   I+S   SN  S  +AL+ +Y KSG+L+D
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  MPE N VS+N +I   AQ+G     L  ++ M+ SG  P+ ++ ++VLSAC+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           CG ++EG +YFN+M + +K+ P+ EHY+ M+D+L R+G  +EAE+ +  MP++P  + W+
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CR HKN+  A++AA++L  M+ L  A PYV ++N+YA A +WE ++ V+K+MR +
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLA-ATPYVMLANMYADARKWEEMASVRKSMRGK 578

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            +RK    SW+E+K K HVF A D  HP   E+   +E +M++MKK GY  D   A+  E
Sbjct: 579 RIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKE 638

Query: 670 DEEIKVES---LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           DE  + +    L +HSE+LA+AF L++T +G  ++V+KNLR C DCH AIK +S + GRE
Sbjct: 639 DEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGRE 698

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD+ RFH FKDG CSC D+W
Sbjct: 699 IIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 232/460 (50%), Gaps = 13/460 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N+++  Y K   +  AR+LF+ +     VS+  LI GY+   +   A  LF  MR
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G + D  T + L++ C   D  + + Q+H   +  G++S   + N+ V  Y K   L
Sbjct: 133 KL-GFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189

Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             A  VF  M + +D VS+N++I  + +     +A+ L+ EM   GFK   FT A+ L+A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDG 240
              L  +  GRQ H  ++K  F +N  V + L+D YSK    D + ++ K+F E+   D 
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309

Query: 241 VSYNVMITCYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           V +N MI+ Y+ NE+  +E++K FR++Q          F  + S  +N       +QIH 
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             I +   S  + V N+L+ +Y K G  ++A+ +F  +  ++ V +  MI  Y Q G+  
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
           EAL L+  M  + I+ ++ TF ++L A A    +  G++  +  ++  F         S 
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSC 488

Query: 417 LLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
           ++D+  ++G L++A +    MP +   V+W AL+ AC ++
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 184/401 (45%), Gaps = 38/401 (9%)

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           TF   L   V   D+  G+ +HA  VK+    + +++N  ++LYSK   +  AR  F   
Sbjct: 10  TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQ--------------------------FT 269
            E +  SYNV++  YA + +   + +LF E+                           F 
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129

Query: 270 R-----FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           R     F+   F  S L++   +++DL   +Q+H  ++     S   V N+ V  Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 325 RFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              EA  +F  +  +   V W +MI AY Q     +AL L+ EM       D  T AS+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG---SLKDAIQTFKEMPER 440
            A   L  L  G+Q H  +I++GF  N   GS L+D Y+K G    + D+ + F+E+   
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307

Query: 441 NIVSWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++V WN +IS  + N + ++  +KSF  M + G++PD  S + V SACS+     +  Q 
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
                + +    +     +++ +  +SG   +A  +  +MP
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+      N LIS Y KSGNL  AR +F+ M +  AVS+  +I GY+Q     EA  L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435

Query: 61  VDMRTDGGSDPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M  D G  P+ +TF  +LS C+   + D   E      +  K    +    C  ++D 
Sbjct: 436 QRM-LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC--MIDL 492

Query: 118 YCKIRCLDLARRVFKEMPQK-DSVSFNALITGFAKE---GLNEEAIKLFVEMQHLGFKP 172
             +   L+ A R    MP K  SV++ AL+    K     L E A    + MQ L   P
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/583 (40%), Positives = 371/583 (63%), Gaps = 9/583 (1%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P    ++  L+    L  +  GR +HA +  + F +++ + N +L++Y+K   + EA+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF +MP  D VS+ V+I+ Y+ + Q  E+L LF ++    F  ++F  S+LL       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
               GRQ+H  ++       V V +SL+DMYA+     EAK IF +L+  + V W A+I+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            + +KG  E  + LF +M R        T++S+L A A   SL  GK +H+ VI+SG   
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             + G+ L+DMYAKSGS+KDA + F+ + +++IVSWN++IS  AQ+G     L+ FE M+
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           ++  QP+ ++ LSVL+ACSH GL++EG QY+  + +K+K+  +  H+ ++VD+L R+G  
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL 458

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           +EA K + +MP +P   +W +++ +CR+HKN++    AA+Q+F+++   D+ P+V +SNI
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDP-HDSGPHVLLSNI 517

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+    ++V+K M+E GV+K  A SWVE++++VHVF AND+ HP   EI+R  E +
Sbjct: 518 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 577

Query: 650 MQEMKKEGYKPDTSCAL---HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             ++K+ GY PDTS  L   + +D E+K   L+YHSE+LA+AFA++ TP G  I + KN+
Sbjct: 578 SGKIKEIGYVPDTSHVLFFMNQQDRELK---LQYHSEKLALAFAVLKTPPGLTIRIKKNI 634

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH+A K  S++ GREI VRD++RFHHF  G CSCRD+W
Sbjct: 635 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 219/394 (55%), Gaps = 4/394 (1%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G  +P+   ++ +L+ C+      +   +HA I    +   L++ N +++ Y K
Sbjct: 93  LDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAK 152

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A+ +F +MP KD VS+  LI+G+++ G   EA+ LF +M HLGF+P++FT ++ 
Sbjct: 153 CGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212

Query: 181 LSA-GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A G G +D   GRQ+HAF +K  +  NV V ++LLD+Y++   + EA+ +F  +   +
Sbjct: 213 LKASGTGPSD-HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I  +A   + +  ++LF ++    F+ + F +S++L+  A+   L+ G+ +H 
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHA 330

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I +       + N+L+DMYAK G  ++AK++F  L     V W ++IS Y Q G   E
Sbjct: 331 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 390

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF +M +A +  ++ TF S+L A +    L  G+     + +    + V     ++D
Sbjct: 391 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 450

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
           +  ++G L +A +  +EMP +   + W AL+ AC
Sbjct: 451 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGAC 484



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 238/496 (47%), Gaps = 59/496 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N +++ Y K G+L  A++LF+ M  +  VSWT+LI GYSQ  Q  EA  LF  M 
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM- 197

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+  T ++LL       + +   Q+HA  +K+GY+  + + +SL+D Y +   +
Sbjct: 198 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F  +  K+ VS+NALI G A++G  E  ++LF +M   GF+P+ FT+++ L+  
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACA 317

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+ VHA V+K+      ++ N L+D+Y+K   + +A+K+F  + + D VS+N
Sbjct: 318 SS-GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 376

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ YA +    E+L+LF ++   +   ++  F ++L+  ++   L  G Q + + +  
Sbjct: 377 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKK 435

Query: 305 TAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEAL 361
             I E +VA+  ++VD+  + GR  EA +    +    T   W A++ A           
Sbjct: 436 HKI-EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGA----------- 483

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                 CR + + D   +A+      EL     G  +         +SN+         Y
Sbjct: 484 ------CRMHKNMDLGVYAA--EQIFELDPHDSGPHV--------LLSNI---------Y 518

Query: 422 AKSGSLKDAIQTFKEMPERNI-----VSWNAL---ISACAQNGDAQATLKSFEDMVQS-- 471
           A +G L DA +  K M E  +      SW  +   +     N D+    +  + M +   
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578

Query: 472 ------GYQPDSVSLL 481
                 GY PD+  +L
Sbjct: 579 GKIKEIGYVPDTSHVL 594


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/624 (38%), Positives = 364/624 (58%), Gaps = 34/624 (5%)

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +AR +F    +K+ V FN +I  +    L  EA+ +F  M    F P  +TF   L A  
Sbjct: 89  VARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GL ++ +G QVH  +VK     N+F+ NAL+ +Y K  C+ EARK+  +MP  D VS+N 
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  YA + Q+ ++L++ +E+     +      ++L  VV                   T
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC-----------------YT 251

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           ++  V+  +++                F  ++  + + W  MI+ YV      EA++LF+
Sbjct: 252 SLENVQYIHNM----------------FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    +  D  T AS+L A  +L++L LG++LH ++ +     N+   +ALLDMYAK G
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            L++A   F +M  R++VSW +++SA  ++G     +  F  M+ SG  PDS++ +SVLS
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+++G  YF  MT++Y + P+ EH+A MVD+  R+G  +EA   + QMP EP+E
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++++CR+H  ++    AAD LF++   + +  YV +SNIYA AG W+ V  V+ A
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAP-KQSGYYVLLSNIYAKAGMWKDVMNVRYA 534

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M++ G++KV   S VEL  +VH F A D+ HPQ   I  +++ L+ +MK+ GY P T  A
Sbjct: 535 MKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESA 594

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD + E K   L  HSE+LAI FA++NT +G+PI + KNLR C DCH AIKLISKI  R
Sbjct: 595 LHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSR 654

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
            I VRD +RFHHF +G CSC D+W
Sbjct: 655 NIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 220/446 (49%), Gaps = 42/446 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G  + AR +F+  +++  V + ++I  Y   N + EA  +F  M +    +P
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNP 135

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  +L  CS  D     +QVH  I+K G ++ L I N+LV  Y K  CL  AR+V 
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MP +D VS+N+++ G+A+ G  ++A+++  EM  L     D    A+LS         
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN-HDAGTMASLSP-------- 246

Query: 192 LGRQVHAFVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
                   VV    +ENV ++ N                 +F  M + + +S+NVMI  Y
Sbjct: 247 --------VVCYTSLENVQYIHN-----------------MFERMTKKNLISWNVMIAIY 281

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N    E++ LF +++           ++LL    +   L +GR++H           +
Sbjct: 282 VNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNL 341

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + N+L+DMYAKCG  EEA+++F  +     V WT+M+SAY + G   +A+ LF +M  +
Sbjct: 342 LLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDS 401

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRS---GFMSNVFSGSALLDMYAKSGSL 427
             + D   F S+L A +    L  G+  H F + +   G +  +   + ++D++ ++G +
Sbjct: 402 GQNPDSIAFVSVLSACSHTGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEV 459

Query: 428 KDAIQTFKEMP-ERNIVSWNALISAC 452
           ++A    K+MP E N   W AL+SAC
Sbjct: 460 EEAYSFIKQMPMEPNERVWGALLSAC 485



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           +A  L+  YS       AR +F    E + V +NVMI  Y  N  Y E+L +F+ +    
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           F+   + F  +L   +   +L++G Q+H   +     + + + N+LV MY KCG   EA+
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++   + +   V W +M++ Y Q G  ++AL +  EM   N++ D  T AS L       
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYT 251

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL   + +H+                                 F+ M ++N++SWN +I+
Sbjct: 252 SLENVQYIHNM--------------------------------FERMTKKNLISWNVMIA 279

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               N      +  F  M + G +PD+V++ S+L AC     +  G +  +   +K  LR
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG-RRLHKYIEKGNLR 338

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           P      +++D+  + GC +EA  +  +M    D + W+S++++
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 42/353 (11%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    N L++ Y K G L  AR++ + M  R  VSW  ++ GY+Q  QF +A ++   
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI--- 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                               C E D+ N             +++  +   S V  Y  + 
Sbjct: 226 --------------------CKEMDSLN-----------LNHDAGTMASLSPVVCYTSLE 254

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +     +F+ M +K+ +S+N +I  +    +  EA+ LF++M+  G KP   T A+ L 
Sbjct: 255 NVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLP 314

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L+ + LGR++H ++ K N   N+ + NALLD+Y+K  C+ EAR +F +M   D VS
Sbjct: 315 ACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVS 374

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQT 301
           +  M++ Y  + Q  +++ LF ++  +  +     F ++LS  ++   L  GR      T
Sbjct: 375 WTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMT 434

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
                +  ++    +VD++ + G  EEA   ++ +  +   P    W A++SA
Sbjct: 435 EQYGIVPRIEHFACMVDLFGRAGEVEEA---YSFIKQMPMEPNERVWGALLSA 484



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 168/347 (48%), Gaps = 39/347 (11%)

Query: 296 QIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           ++H++ ++   +  +  +A  L+  Y+  G    A+ IF      + V +  MI +YV  
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
               EAL++F  M     + D  TF  +L+A + L +L +G Q+H  +++ G  +N+F G
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +AL+ MY K G L++A +   +MP R++VSWN++++  AQ+G     L+  ++M      
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
            D+ ++ S+     +  L  E +QY ++M ++   +     +  M+ I   +   +EA  
Sbjct: 236 HDAGTMASLSPVVCYTSL--ENVQYIHNMFERMT-KKNLISWNVMIAIYVNNSMPNEAVS 292

Query: 535 LMAQMP---FEPDEIMWSSVINSC----------RIHKNLE-----------------FA 564
           L  QM     +PD +  +S++ +C          R+HK +E                 +A
Sbjct: 293 LFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYA 352

Query: 565 K----KAADQLFKMEKLRDAAPYVAMSNIYAVAGQ-WESVSQVKKAM 606
           K    + A  +F   +LRD   + +M + Y  +GQ +++V+   K +
Sbjct: 353 KCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKML 399


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 409/743 (55%), Gaps = 6/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K G+L  AR LF+   M     VSW  +I  +  + +  EA  LF  M+  G
Sbjct: 184 NALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVG 243

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            +   Y TF   L G  +P      + +H   +K  + + + + N+L+  Y K   ++ A
Sbjct: 244 VASNTY-TFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            RVF  M  +D VS+N L++G  +  L  +A+  F +MQ+   KP   +    ++A    
Sbjct: 303 ERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRS 362

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++  G++VHA+ ++     N+ + N L+D+Y+K  CV      F  M E D +S+  +I
Sbjct: 363 GNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTII 422

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA NE + E++ LFR++Q    D       ++L   +        R+IH   +    +
Sbjct: 423 AGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY-VFKRDL 481

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +++ + N++V++Y + G  + A+  F ++     V WT+MI+  V  G   EAL LF  +
Sbjct: 482 ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            + NI  D     S L A+A L+SL  GK++H F+IR GF       S+L+DMYA  G++
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           +++ + F  + +R+++ W ++I+A   +G     +  F+ M      PD ++ L++L AC
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYAC 661

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG ++F  M   Y+L P  EHYA MVD+L RS   +EA + +  MP +P   +
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEV 721

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C IH N E  + AA +L + +  +++  Y  +SNI+A  G+W  V +V+  M+
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDT-KNSGKYALISNIFAADGRWNDVEEVRLRMK 780

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM-KKEGYKPDTSCAL 666
             G++K    SW+E+ +K+H F A D+ HPQT++I  K+    + + KK GY   T    
Sbjct: 781 GNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVF 840

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+  EE K + L  HSERLA+ + L+ TP+G+ I + KNLR C DCH   K+ S+++ R 
Sbjct: 841 HNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRA 900

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRD++RFHHF+ G CSC DFW
Sbjct: 901 LVVRDANRFHHFERGLCSCGDFW 923



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 258/525 (49%), Gaps = 26/525 (4%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFA--TLLSGCSEPDTANELIQVHADIIKFGYNS 106
            K     AF+    + T   + P  +  A   LL  C       +  Q+HA ++K   ++
Sbjct: 20  NKGTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSA 79

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            L     L+  Y K   L  A +VF EM ++   ++NA++  F   G   EAI+L+ EM+
Sbjct: 80  FL--ATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMR 137

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            LG      TF + L A   L +  LG ++H   VK  F E VFV NAL+ +Y K   + 
Sbjct: 138 VLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLG 197

Query: 227 EARKLFGE--MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
            AR LF    M + D VS+N +I+ +    +  E+L LFR +Q      + + F   L  
Sbjct: 198 GARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQG 257

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
           V +   +++G  IH   + +   ++V VAN+L+ MYAKCGR E+A+ +FA++     V W
Sbjct: 258 VEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSW 317

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             ++S  VQ     +ALN F +M  +    DQ +  +++ AS    +L  GK++H++ IR
Sbjct: 318 NTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIR 377

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           +G  SN+  G+ L+DMYAK   +K     F+ M E++++SW  +I+  AQN      +  
Sbjct: 378 NGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINL 437

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F  +   G   D + + SVL ACS       GL+  N + + +    K++    + DI+ 
Sbjct: 438 FRKVQVKGMDVDPMMIGSVLRACS-------GLKSRNFIREIHGYVFKRD----LADIML 486

Query: 525 RSGCF----DEAEKLMAQMPFEP----DEIMWSSVINSCRIHKNL 561
           ++       +   +  A+  FE     D + W+S+I  C +H  L
Sbjct: 487 QNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCC-VHNGL 530



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 21/346 (6%)

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           +SL L          R +   S LL +      L  G+Q+H + ++ + +S   +A  L+
Sbjct: 29  QSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHAR-LLKSHLSAF-LATKLL 86

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MY KCG  ++A ++F  ++  +   W AM+ A+V  G   EA+ L+ EM    ++ D  
Sbjct: 87  HMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDAC 146

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE- 436
           TF S+L+A   L    LG ++H   ++ GF   VF  +AL+ MY K G L  A   F   
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206

Query: 437 -MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            M + + VSWN++ISA    G     L  F  M + G   ++ + ++ L        ++ 
Sbjct: 207 MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 496 GLQYFNSMTQKYKLRPKKEHYA------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           G+    +         K  H+A      +++ +  + G  ++AE++ A M    D + W+
Sbjct: 267 GMGIHGAAL-------KSNHFADVYVANALIAMYAKCGRMEDAERVFASM-LCRDYVSWN 318

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           ++++   + +N E  + A +    M+        V++ N+ A +G+
Sbjct: 319 TLLSG--LVQN-ELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/655 (37%), Positives = 389/655 (59%), Gaps = 5/655 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA +I+  +  + I  N L+  Y K   L LAR++F  MP +++VS N L++G+A  G 
Sbjct: 33  IHAQMIRAAHFDV-IQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGR 91

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           + +A+ L   ++   F  +++  + ALSA   +    +GRQ H + VK+   E+ +V NA
Sbjct: 92  HSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNA 148

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L +Y +   V +A K+F  +   D  ++N MI  +    ++  S+++ R +        
Sbjct: 149 VLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWD 208

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              +  +L   A+  +L +G Q+H Q +       V V ++LVDMY KC    +A   F 
Sbjct: 209 HVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFE 268

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            L   + V WTA+++AY Q    E+AL LF+++    +  ++ T+A  L + A LA+L  
Sbjct: 269 VLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKN 328

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  L +  +++G    +   +AL++MY+KSGS+ DA + F  MP R++VSWN++I   A 
Sbjct: 329 GNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAH 388

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G A+  +  F DM+ +   P  V+ + VL AC+  GL++EGL Y N M ++  ++P +E
Sbjct: 389 HGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGRE 448

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  MV +LCR+G  DEAE+ +       D + W S+++SC+++KN     + A+Q+ ++
Sbjct: 449 HYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQL 508

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
            K  D   YV +SN+YA A +W+ V +V+K MRERGVRK    SW+++ S+VHVFT+ D+
Sbjct: 509 -KPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDK 567

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            H   N+I  K++ L+ ++K  GY P+ +  LHD + E K E L YHSE++A+AF LI++
Sbjct: 568 NHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHS 627

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           PEG  I +MKNLR C DCH AIKLIS +T R+I VRD+ RFH   DG CSC D+W
Sbjct: 628 PEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 238/483 (49%), Gaps = 8/483 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N LI+ Y K G L  AR++F++M  R AVS  +L+ GY+   +  +A  L   ++
Sbjct: 44  DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALAL---LK 100

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
               S  +YV  +T LS  +   +     Q H   +K G      +CN+++  YC+   +
Sbjct: 101 AADFSLNEYV-LSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHV 159

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A +VF+ +   D  +FN++I GF   G  + +I++   M     +    ++ A L   
Sbjct: 160 EDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHC 219

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++ LG QVHA  +K    +NV+V +AL+D+Y K DC  +A   F  +PE + VS+ 
Sbjct: 220 ASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWT 279

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++T Y  NE+++++L+LF +L+      ++F ++  L+  A    L+ G  +    + T
Sbjct: 280 AVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKT 339

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V N+L++MY+K G   +A  +F ++     V W ++I  Y   G   EA+ +F
Sbjct: 340 GHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVF 399

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M  A I     TF  +L A A+L  +  G    + +++  G        + ++ +  +
Sbjct: 400 HDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCR 459

Query: 424 SGSLKDAIQ-TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G L +A Q         ++V+W +L+S+C    +     +  E ++Q   +P+ V    
Sbjct: 460 AGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQ--LKPNDVGTYV 517

Query: 483 VLS 485
           +LS
Sbjct: 518 LLS 520



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 213/517 (41%), Gaps = 107/517 (20%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATAREL-------FNSMVDRTAVSWTILIGGYSQKNQ- 52
           MP++N VS N+L+SGY  +G  + A  L        N  V  TA+S    +  Y    Q 
Sbjct: 71  MPSRNAVSGNLLMSGYASAGRHSDALALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQC 130

Query: 53  ----------------------------------------------FREAFKLFVDMRTD 66
                                                         F      F+D+   
Sbjct: 131 HGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEF 190

Query: 67  GGS------------DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
            GS              D+V++  +L  C+         QVHA  +K      + + ++L
Sbjct: 191 DGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSAL 250

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           VD Y K  C   A   F+ +P+K+ VS+ A++T + +    E+A++LF++++  G +P++
Sbjct: 251 VDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNE 310

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT+A AL++  GLA +  G  + A  +KT     + V NAL+++YSK   + +A ++F  
Sbjct: 311 FTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLS 370

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  D VS+N +I  YA +   +E++ +F ++       S   F  +L   A     Q+G
Sbjct: 371 MPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACA-----QLG 425

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
                  +V   +  + +   + +M  K GR                  +T M+    + 
Sbjct: 426 -------LVDEGLYYLNIM--MKEMGIKPGREH----------------YTCMVGLLCRA 460

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G L+EA    +  C   I  D   + S+L +     +  LG ++   +++     N    
Sbjct: 461 GRLDEAEQFILSNC---IGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQ--LKPNDVGT 515

Query: 415 SALL-DMYAKSGSLKDAIQTFKEMPERNI-----VSW 445
             LL +MYAK+      ++  K M ER +     VSW
Sbjct: 516 YVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSW 552



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 10/103 (9%)

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             L  GK +H+ +IR+    +V   + L+  Y K G L  A Q F  MP RN VS N L+
Sbjct: 25  GELCTGKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLM 83

Query: 450 SACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           S  A  G   DA A LK+ +      +  +   L + LSA +H
Sbjct: 84  SGYASAGRHSDALALLKAAD------FSLNEYVLSTALSAAAH 120


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 395/687 (57%), Gaps = 15/687 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C E  +      +H  ++K G    + +  SLV+ Y +      AR +F EMP
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +K+ V++ ALITG+        A+++FVEM  LG  PSD+T    LSA V   +I LG+Q
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH + +K        + N+L  LY+K   +    + F  +P+ + +++  MI+  A +E 
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260

Query: 256 YKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           Y E  L LF ++       ++F  ++++S+    LD+ +G+Q+          + + V N
Sbjct: 261 YTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKN 320

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNL 363
           S + +Y + G  EEA  +F  +   S + W AMIS + Q     K +L       +AL +
Sbjct: 321 STMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F ++ R+ +  D  TF+SIL   + + +L  G+Q+H+  I++GF+S+V   SAL++MY K
Sbjct: 381 FRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++ A + F EMP R +V+W ++IS  +Q+G     ++ FEDM+ +G +P+ ++ +S+
Sbjct: 441 CGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSL 500

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACS+ GL+EE ++YF+ M  +Y + P  +HY  M+D+  R G  D+A   + +  FEP
Sbjct: 501 LSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP 560

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E +WSS++  CR H N+E A  AAD+L ++ K +    YV + N+Y   G+W  V++V+
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLLEL-KPKVVETYVLLLNMYISTGRWRDVARVR 619

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K  +   +  +   SW+ ++ KV+ F A+D  HPQ+ E+ + +E L+++ K  GY+P  +
Sbjct: 620 KLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQN 679

Query: 664 CALHDEDEEIK--VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
             L+D +E+ K    SLK+HSERLA+A  L+  P G  + + KN+  C DCH++IK  S 
Sbjct: 680 TELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSL 739

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDF 748
           +  REI VRDS R H FKDG CSC DF
Sbjct: 740 LANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 234/462 (50%), Gaps = 15/462 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y++ GN   AR LF+ M ++  V+WT LI GY+  +Q   A ++FV+M   G    
Sbjct: 119 LVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPS 178

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           DY T   +LS C      +   QVH   IK+G  SI  I NSL   Y K   L+   R F
Sbjct: 179 DY-TLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAF 237

Query: 132 KEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           K +P K+ +++  +I+  A+ E   E  + LF++M      P++FT  + +S      D+
Sbjct: 238 KRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDM 297

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG+QV  F  K     N+ V N+ + LY +     EA +LF EM +   +++N MI+ +
Sbjct: 298 NLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGF 357

Query: 251 AW-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           A              +  ++LK+FR+L  +      F FS++LSV +  + L+ G QIH 
Sbjct: 358 AQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHA 417

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           QTI T  +S+V V ++LV+MY KCG  E A + F  +   + V WT+MIS Y Q G   +
Sbjct: 418 QTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHD 477

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALL 418
           A+ LF +M  A    ++ TF S+L A +    +    +    +     +  +      ++
Sbjct: 478 AIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMI 537

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           DM+ + G L DA    K    E N   W++L++ C  +G+ +
Sbjct: 538 DMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNME 579



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 181/376 (48%), Gaps = 35/376 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L   Y KSGNL +    F  + D+  ++WT +I   ++   + E    LF+DM   G 
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDM-LKGE 276

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      N   QV     K G  + L + NS +  Y +    + A 
Sbjct: 277 VMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAM 336

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R+F+EM     +++NA+I+GF      AK+ L+      +A+K+F ++     KP  FTF
Sbjct: 337 RLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTF 396

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +KT F+ +V V +AL+++Y+K  C+  A K F EMP 
Sbjct: 397 SSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPT 456

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--------ANKL 289
              V++  MI+ Y+ + +  ++++LF ++       ++  F +LLS          A + 
Sbjct: 457 RTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRY 516

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WT 345
              +  + H + ++            ++DM+ + GR ++A   +A +      P    W+
Sbjct: 517 FDMMQNEYHIEPLMDH-------YGCMIDMFVRLGRLDDA---YAFIKRKGFEPNEAIWS 566

Query: 346 AMISAYVQKGNLEEAL 361
           ++++     GN+E A 
Sbjct: 567 SLVAGCRSHGNMELAF 582



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 10/200 (5%)

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           + M +   S   A +  +L    E  SL   K LH  ++++G + ++F  ++L+++Y + 
Sbjct: 67  MAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRC 126

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+ +DA   F EMPE+N+V+W ALI+    N      L+ F +M++ G  P   +L  +L
Sbjct: 127 GNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGML 186

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR----SGCFDEAEKLMAQMP 540
           SAC     I+ G Q        Y ++       S+ + LCR    SG  +   +   ++P
Sbjct: 187 SACVASHNIDLGKQ-----VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP 241

Query: 541 FEPDEIMWSSVINSCRIHKN 560
            + + I W+++I++C   +N
Sbjct: 242 -DKNVITWTTMISACAEDEN 260



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 5/152 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G +  A + F  M  RT V+WT +I GYSQ  +  +A +LF DM 
Sbjct: 427 DVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMI 486

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN--SILIICNSLVDSYCKIR 122
              G+ P+ +TF +LLS CS      E ++ + D+++  Y+   ++     ++D + ++ 
Sbjct: 487 L-AGAKPNEITFVSLLSACSYAGLVEEAMR-YFDMMQNEYHIEPLMDHYGCMIDMFVRLG 544

Query: 123 CLDLARRVFKEMP-QKDSVSFNALITGFAKEG 153
            LD A    K    + +   +++L+ G    G
Sbjct: 545 RLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/767 (34%), Positives = 429/767 (55%), Gaps = 26/767 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +N+V  N LIS Y K G+L  A++ F+ +     R  V+W  +I  + +    REA +LF
Sbjct: 40  ENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLF 99

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDSY 118
            DM  DG   P+ VTF ++L  C E    +  ++  +H  I+  G      +  +LVDSY
Sbjct: 100 RDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSY 159

Query: 119 CKIRCLDLARRVF----KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
            K+  LD A  VF     E P    V+ +A+I+   + G  +E+++LF  M   G KPS 
Sbjct: 160 GKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSG 219

Query: 175 FTFAAALSA----GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            T  + L+A     VG A   +  Q    V  T   +NV     LL  Y++ + +  AR 
Sbjct: 220 VTLVSVLNACSMLPVGSATAFVLEQAMEVVSATR--DNVL-GTTLLTTYARSNDLSRARA 276

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA---N 287
            F  +   D VS+N M   Y  + + +E+L LF  +       S   F T L+  A    
Sbjct: 277 TFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPP 336

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI--STVPWT 345
           +    IG++I +         +  VAN+ ++MYAKCG   +A+ +F  +S      + W 
Sbjct: 337 QTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWN 396

Query: 346 AMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           +M++AY   G  +EA  LF  M     +  ++ TF ++L AS    S++ G+++H+ V+ 
Sbjct: 397 SMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVS 456

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATL 462
           +GF S+    +ALL+MYAK GSL DA   F +    + ++++W +L++  AQ G A+  L
Sbjct: 457 NGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERAL 516

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           K F  M Q G +P+ ++ +S L+AC+H G +E+G +  + MT  + + P  +H++ +VD+
Sbjct: 517 KLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDL 576

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R G  DEAEKL+ +   + D I W +++++C+  K LE  ++ A+++ +++    A+ 
Sbjct: 577 LGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDP-EVASS 634

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           Y+ ++++YA AG+W   + ++K M ++G+R     S VE+  ++H F+A D+ HP++ EI
Sbjct: 635 YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 694

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
             ++E L   +K  GY  DT   LHD  +E K   L  HSE+LAIAF L++TP GSP+ V
Sbjct: 695 YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 754

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C+DCH A KLISK+TGR+I +RDSSR+HHF  G CSC D+W
Sbjct: 755 IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 233/503 (46%), Gaps = 25/503 (4%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+      L++ CS         ++H+ I    +    ++ N+L+  Y K   L  A++ 
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 131 FKEMP---QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSAGV- 185
           F  +P   ++D V++NA+I+ F + G   EA++LF +M H G  P +  TF + L + V 
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 186 -GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF----GEMPEVDG 240
            GL  +   R +H  +V        FV  AL+D Y K   + +A ++F     E P    
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---- 296
           V+ + MI+    N   +ESL+LF  +       S     TL+SV+     L +G      
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGV---TLVSVLNACSMLPVGSATAFV 241

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +     V +A  +  +  +L+  YA+      A+  F  +     V W AM +AY+Q   
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAEL---ASLSLGKQLHSFVIRSGFMSNVFS 413
             EAL LF  M    +    ATF + L A A      + ++GK++ S +  +G   +   
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDM-VQ 470
            +A L+MYAK GSL DA   F+ +    R+ ++WN++++A   +G  +   + F+ M  +
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
              +P+ V+ ++VL A +    I +G +  ++               +++++  + G  D
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGRE-IHARVVSNGFESDTVIQNALLNMYAKCGSLD 480

Query: 531 EAEKLMAQMPF-EPDEIMWSSVI 552
           +A+ +  +    + D I W+S++
Sbjct: 481 DAQAIFDKSSSNQEDVIAWTSLV 503



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 28/403 (6%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P+     A ++A   L ++A GR++H+ +   +F EN  + NAL+ +YSK   +++A++
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 231 LFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVV- 285
            F  +P     D V++N MI+ +  N   +E+L+LFR++     D +  P S T +SV+ 
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMD---HDGAPPPNSVTFVSVLD 120

Query: 286 ----ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS---- 337
               A  L L+  R IH + +      E  V  +LVD Y K G  ++A E+F   S    
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             S V  +AMISA  Q G  +E+L LF  M          T  S+L A + L   S    
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAF 240

Query: 398 L--HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           +   +  + S    NV  G+ LL  YA+S  L  A  TF  +   ++VSWNA+ +A  Q+
Sbjct: 241 VLEQAMEVVSATRDNVL-GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----HCGLIEEGLQYFNSMTQKYKLR 510
              +  L  FE M+  G +P   + ++ L+AC+         I + +Q   S+ ++  L 
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQ---SLLEEAGLE 356

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQM-PFEPDEIMWSSVI 552
                  + +++  + G   +A  +  ++ P   D I W+S++
Sbjct: 357 GDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSML 399



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 8/183 (4%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-- 438
           +++ A + L +L+ G+++HS +    F  N   G+AL+ MY+K GSL DA Q F  +P  
Sbjct: 12  ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71

Query: 439 -ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHCGLIE-E 495
            +R++V+WNA+ISA  +NG A+  L+ F DM   G   P+SV+ +SVL +C   GL+  E
Sbjct: 72  SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA-EKLMAQMPFEPDE--IMWSSVI 552
            ++  +       +  +     ++VD   + G  D+A E  + +   EP    +  S++I
Sbjct: 132 DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMI 191

Query: 553 NSC 555
           ++C
Sbjct: 192 SAC 194


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/647 (36%), Positives = 378/647 (58%), Gaps = 6/647 (0%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           +I  NSL++ Y K   L LAR +F EM  +  VS+N L+ G+   G + E +KLF  M  
Sbjct: 55  IIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVS 114

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
             ++P+++ F   LSA      +  G Q H F+ K   V + FV ++L+ +YSK   V  
Sbjct: 115 SLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDL 174

Query: 228 ARKLF----GEMP-EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
           A ++     G +  + D   YN ++     + +  E++++   +           + +++
Sbjct: 175 ALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVM 234

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
            +     DL +G Q+H Q +      +V V + LVDM+ KCG    A+++F  L + + V
Sbjct: 235 GLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVV 294

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT++++AY+Q G  EE LNL   M R    +++ TFA +L A A +A+L  G  LH+ V
Sbjct: 295 VWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARV 354

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            + G  + V  G+AL++MY+K G +  +   F +M  R+I++WNA+I   +Q+G  +  L
Sbjct: 355 EKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQAL 414

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F+DM+ +G  P+ V+ + VLSAC+H  L+ EG  Y N + + +K+ P  EHY  +V +
Sbjct: 415 LLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAV 474

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           LCR+G  +EAE  M     + D + W  ++N+C IH+N     K A+ + +M+  RD   
Sbjct: 475 LCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDP-RDMGT 533

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           Y  +SN+YA A  W+SV+ ++K MRER V+K    SW+E+++ VHVF+++   HP+  +I
Sbjct: 534 YTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQI 593

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
             K++ L++ +K+ GY P+    LHD ++E K   L YHSE+LAIA+ L+  P  +PI V
Sbjct: 594 YNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRV 653

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KNLR C DCH A+KLISK+T R I VRD+SRFHHF+DG C+C D W
Sbjct: 654 IKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 241/492 (48%), Gaps = 18/492 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI+ YVK   L  AR LF+ M  R+ VS+ +L+GGY    +  E  KLF +M 
Sbjct: 54  NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           +      +YV F T+LS C+      E +Q H  + KFG      + +SLV  Y K   +
Sbjct: 114 SSLYQPNEYV-FTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172

Query: 125 DLARRVFKEMP-----QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           DLA +V +          D+  +N+++    + G   EA+++   M   G      T+ +
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            +     + D+ LG QVHA ++K     +VFV + L+D++ K   V+ ARK+F  +   +
Sbjct: 233 VMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V +  ++T Y  N +++E+L L   +       ++F F+ LL+  A    L+ G  +H 
Sbjct: 293 VVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHA 352

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           +       + V V N+L++MY+KCG  + + ++F ++ +   + W AMI  Y Q G  ++
Sbjct: 353 RVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQ 412

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLS-----LGKQLHSFVIRSGFMSNVFSG 414
           AL LF +M  A    +  TF  +L A A LA ++     L + +  F +  G        
Sbjct: 413 ALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHY---- 468

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           + ++ +  ++G L++A    +    + ++V+W  L++AC  + +     K  E ++Q   
Sbjct: 469 TCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQ--M 526

Query: 474 QPDSVSLLSVLS 485
            P  +   ++LS
Sbjct: 527 DPRDMGTYTLLS 538



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 178/350 (50%), Gaps = 7/350 (2%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           N+   N+L++LY K   +  AR LF EM     VSYNV++  Y  + ++ E +KLF+ + 
Sbjct: 54  NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
            + +  +++ F+T+LS  A+   +  G Q H        +    V +SLV MY+KC   +
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173

Query: 328 EAKEIF----ANLSHIS-TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            A ++      N+ + +    + ++++A V+ G L EA+ +   M    +  D  T+ S+
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           +    ++  L LG Q+H+ +++ G   +VF GS L+DM+ K G +  A + F  +  RN+
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           V W +L++A  QNG+ + TL     M + G   +  +   +L+A +    +  G    ++
Sbjct: 294 VVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG-DLLHA 352

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             +K  ++ +     +++++  + GC D +  +   M    D I W+++I
Sbjct: 353 RVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMI 401



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 46/271 (16%)

Query: 387 AELASLSLGKQLHS-FVIRSGFMS-------NVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           A   +L+ GK +H+  +IR+   +       N+   ++L+++Y K   L+ A   F EM 
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            R++VS+N L+     +G+    +K F++MV S YQP+     +VLSAC+H G + EG+Q
Sbjct: 83  LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142

Query: 499 -------------YF--NSMTQKYK---------LRPKKEH-----------YASMVDIL 523
                        +F  +S+   Y             + EH           Y S+++ L
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202

Query: 524 CRSGCFDEAEKLMAQMPFEP---DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
             SG   EA +++ +M  E    D + + SV+  C   ++L    +   QL K     D 
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
                + +++   G   S  +V   ++ R V
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQNRNV 293


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/557 (40%), Positives = 363/557 (65%), Gaps = 2/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VHA ++++ F  ++ + N LL++Y+K   + EARK+F +MP+ D V++  +I+ Y+ 
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           +++  ++L  F ++    +  ++F  S+++   A +     G Q+H   +     S V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L+D+Y + G  ++A+ +F  L   + V W A+I+ + ++   E+AL LF  M R   
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
                ++AS+  A +    L  GK +H+++I+SG     F+G+ LLDMYAKSGS+ DA +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  + +R++VSWN+L++A AQ+G  +  +  FE+M + G +P+ +S LSVL+ACSH GL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++EG  Y+  M +K  + P+  HY ++VD+L R+G  + A + + +MP EP   +W +++
Sbjct: 379 LDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           N+CR+HKN E    AA+ +F+++   D  P+V + NIYA  G+W   ++V+K M+E GV+
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDP-DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K  A SWVE+++ +H+F ANDE HPQ  EI RK E ++ ++K+ GY PDTS  +   D++
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 556

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            +  +L+YHSE++A+AFAL+NTP GS I + KN+R C DCH AIKL SK+ GREI VRD+
Sbjct: 557 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDT 616

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFKDG CSC+D+W
Sbjct: 617 NRFHHFKDGNCSCKDYW 633



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 210/388 (54%), Gaps = 7/388 (1%)

Query: 76  FATLLSGCSEPDTANELIQ---VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           + TLL  C+       LIQ   VHA I++  +   +++ N+L++ Y K   L+ AR+VF+
Sbjct: 63  YNTLLKKCT---VFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           +MPQ+D V++  LI+G+++     +A+  F +M   G+ P++FT ++ + A         
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+H F VK  F  NV V +ALLDLY+++  + +A+ +F  +   + VS+N +I  +A 
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
               +++L+LF+ +    F  S F +++L    ++   L+ G+ +H   I +        
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+DMYAK G   +A++IF  L+    V W ++++AY Q G  +EA+  F EM R  I
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ +F S+L A +    L  G   +  + + G +   +    ++D+  ++G L  A++
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 433 TFKEMP-ERNIVSWNALISACAQNGDAQ 459
             +EMP E     W AL++AC  + + +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 2/356 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + V  N L++ Y K G+L  AR++F  M  R  V+WT LI GYSQ ++  +A  LF + 
Sbjct: 93  HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL-LFFNQ 151

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  P+  T ++++   +         Q+H   +K G++S + + ++L+D Y +   
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A+ VF  +  ++ VS+NALI G A+    E+A++LF  M   GF+PS F++A+   A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+ VHA+++K+      F  N LLD+Y+K   + +ARK+F  + + D VS+
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++T YA +   KE++  F E++      ++  F ++L+  ++   L  G   +     
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
              + E     ++VD+  + G    A      +    T   W A+++A     N E
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I AD+  + ++L+       L  G+ +H+ +++S F  ++  G+ LL+MYAK GSL++A 
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH-- 489
           + F++MP+R+ V+W  LIS  +Q+      L  F  M++ GY P+  +L SV+ A +   
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175

Query: 490 ---CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
              CG         +    K          ++++D+  R G  D+A+ +   +    D +
Sbjct: 176 RGCCG------HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-V 228

Query: 547 MWSSVI 552
            W+++I
Sbjct: 229 SWNALI 234


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/640 (38%), Positives = 376/640 (58%), Gaps = 37/640 (5%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           F   I     + L  EA++L    +    KP   T+   +        +  G++VH  + 
Sbjct: 57  FGEAIDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
            + FV  + + N LL +Y+K   +V+ARK+F EMP  D  S+NVM+  YA     +E+ K
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172

Query: 262 LFRELQ-------------FTRFDRSQ--FPFSTLLSVVANKLD---------------- 290
           LF E+              + + D+ +      +L+  V N                   
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232

Query: 291 -LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            ++ G++IH   +     S+  + +SL+DMY KCG  +EA+ IF  +     V WT+MI 
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            Y +     E  +LF E+  +    ++ TFA +L A A+L +  LGKQ+H ++ R GF  
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             F+ S+L+DMY K G+++ A       P+ ++VSW +LI  CAQNG     LK F+ ++
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           +SG +PD V+ ++VLSAC+H GL+E+GL++F S+T+K++L    +HY  +VD+L RSG F
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           ++ + ++++MP +P + +W+SV+  C  + N++ A++AA +LFK+E   +   YV M+NI
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTMANI 531

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+WE   +++K M+E GV K    SW E+K K HVF A D  HP  N+I   +  L
Sbjct: 532 YAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLREL 591

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
            ++MK+EGY P TS  LHD ++E K E+L YHSE+LA+AFA+++T EG+ I V KNLR+C
Sbjct: 592 RKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSC 651

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIK IS IT R+ITVRDS+RFH F++G CSC D+W
Sbjct: 652 VDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 186/362 (51%), Gaps = 2/362 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN++  S N++++GY + G L  AR+LF+ M ++ + SWT ++ GY +K+Q  EA  L+
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+    S P+  T +  ++  +         ++H  I++ G +S  ++ +SL+D Y K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+D AR +F ++ +KD VS+ ++I  + K     E   LF E+     +P+++TFA  
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   L    LG+QVH ++ +  F    F +++L+D+Y+K   +  A+ +    P+ D 
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  +I   A N Q  E+LK F  L  +        F  +LS   +   ++ G +    
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 +S      + LVD+ A+ GRFE+ K + + +    S   W +++      GN++
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505

Query: 359 EA 360
            A
Sbjct: 506 LA 507


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/676 (36%), Positives = 403/676 (59%), Gaps = 6/676 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +++L+  C    +  ++ ++ +  +K G++  L   N L+D+Y K   +  AR+VF E+P
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +  V++N++I  + + G ++EAI ++  M   G  P +FTF++   A   L  +  G++
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 196 VHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            H   VV    V NVFV +AL+D+Y+K   + +AR +  ++   D V +  +I  Y+ + 
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ESL++FR +     + +++  S++L    N  DL  GR IH   +     S V    
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY +CG  +++ ++F    + + V WT++I   VQ G  E AL  F +M R++I+ 
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  T +S+LRA + LA L  GKQ+H+ V++ G   + + G+AL+D Y K GS + A   F
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             + E ++VS N++I + AQNG     L+ F  M  +G +P++V+ L VLSAC++ GL+E
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 497

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG   F+S      +   K+HYA MVD+L R+G   EAE L+ Q+    D ++W +++++
Sbjct: 498 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSA 556

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CRIH ++E AK+  +++  +    D   +V +SN+YA  G W  V ++K AMRE  ++K 
Sbjct: 557 CRIHGDVEMAKRVMNRVIDLAP-EDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKN 615

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SWV+++ ++H F A D  HP   +IR K+E L++++K+ GY PDT   L D DEE K
Sbjct: 616 PAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKK 675

Query: 675 VESLKYHSERLAIAFALINTP-EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           + SL YHSE+LA+AFAL  +  + + I ++KNLR C DCH  +K +SKI GR+I  RD  
Sbjct: 676 IRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVK 735

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHF++G CSC D+W
Sbjct: 736 RFHHFRNGLCSCGDYW 751



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 220/452 (48%), Gaps = 3/452 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y+K G++  AR++F+ +  R  V+W  +I  Y +  + +EA  ++  M  D G 
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD-GI 172

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDLAR 128
            PD  TF+++    S+    +E  + H   +  G   S + + ++LVD Y K   +  AR
Sbjct: 173 LPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 232

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            V  ++  KD V F ALI G++  G + E++++F  M   G + +++T ++ L     L 
Sbjct: 233 LVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 292

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+  GR +H  +VK      V    +LL +Y +   V ++ K+F +    + V++  +I 
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N + + +L  FR++  +    + F  S++L   ++   L+ G+QIH   +      
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 412

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V  +L+D Y KCG  E A+ +F  L  +  V   +MI +Y Q G   EAL LF  M 
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSL 427
              +  +  T+  +L A      L  G  + S    SG +       A ++D+  ++G L
Sbjct: 473 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRL 532

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           K+A     ++   ++V W  L+SAC  +GD +
Sbjct: 533 KEAEMLINQVNISDVVIWRTLLSACRIHGDVE 564



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 231/520 (44%), Gaps = 50/520 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + L+  Y K G +  AR + + +V +  V +T LI GYS   +  E+ ++F +M 
Sbjct: 211 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM- 269

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           T  G + +  T +++L  C   +       +H  I+K G  S +    SL+  Y +   +
Sbjct: 270 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLV 329

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D + +VFK+    + V++ ++I G  + G  E A+  F +M      P+ FT ++ L A 
Sbjct: 330 DDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRAC 389

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+Q+HA V+K     + +V  AL+D Y K      AR +F  + EVD VS N
Sbjct: 390 SSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVN 449

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  YA N    E+L+LF  ++ T  + +   +  +LS   N   L+ G  I +    +
Sbjct: 450 SMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNS 509

Query: 305 TAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA--- 360
             I   K   + +VD+  + GR +EA+ +   ++    V W  ++SA    G++E A   
Sbjct: 510 GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRV 569

Query: 361 LNLFIEMCR---------ANISADQATFASILRASAELASLSLGK-----------QLHS 400
           +N  I++           +N+ A    ++ ++   + +  + L K           ++H+
Sbjct: 570 MNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHT 629

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                 FM+  +S     D+  K   L + ++    +P+   V          Q+ D + 
Sbjct: 630 ------FMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV---------LQDLDEEK 674

Query: 461 TLKSFE----------DMVQSGYQPDSVSLLSVLSACSHC 490
            ++S             + +S Y+  ++ +L  L  C  C
Sbjct: 675 KIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDC 714


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/559 (40%), Positives = 363/559 (64%), Gaps = 4/559 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+ +HA ++ + F +++ + N LL+LY+K   +V ARKLF EM   D V++  +IT Y+ 
Sbjct: 34  GKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQ 93

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTAISEV 310
           +++ +++L L  E+       +QF  ++LL   +     D+  GRQ+H   +     S V
Sbjct: 94  HDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNV 153

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V+ +++DMYA+C   EEA+ IF  +   + V W A+I+ Y +KG  ++A  LF  M R 
Sbjct: 154 YVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRE 213

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N+     T++S+L A A + SL  GK +H+ +I+ G     F G+ LLDMYAKSGS++DA
Sbjct: 214 NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDA 273

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F  + +R++VSWN++++  +Q+G  +  L+ FE+M+++   P+ ++ L VL+ACSH 
Sbjct: 274 KKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHA 333

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL++EG  YF+ M +KY + P+  HY +MVD+L R+G  D A + +++MP +P   +W +
Sbjct: 334 GLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGA 392

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CR+HKN+E    AA+ +F+++       +V + NIYA+AG+W   ++V+K M+E G
Sbjct: 393 LLGACRMHKNMELGGYAAECIFELDS-HYPGTHVLLYNIYALAGRWNDAAKVRKMMKESG 451

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V+K  A SWVE++++VHVF A+D+ HPQ  EI    E +  ++K+ GY PD+S  L   D
Sbjct: 452 VKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMD 511

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           ++ +   L+YHSE+LA+AFAL+NTP GS I + KN+R C DCH+A K +SK+  REI VR
Sbjct: 512 QQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVR 571

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFHHF DG CSC D+W
Sbjct: 572 DTNRFHHFCDGACSCEDYW 590



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 200/378 (52%), Gaps = 3/378 (0%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           TLL  C+  +  NE   +HA ++   +   L++ N+L++ Y K   L  AR++F EM  +
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQ 195
           D V++ ALITG+++    ++A+ L  EM  +G KP+ FT A+ L A  GVG  D+  GRQ
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   ++  +  NV+V+ A+LD+Y++   + EA+ +F  M   + VS+N +I  YA   Q
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             ++  LF  +       + F +S++L   A+   L+ G+ +H   I         V N+
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+DMYAK G  E+AK++F  L+    V W +M++ Y Q G  + AL  F EM R  I+ +
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             TF  +L A +    L  G+     + +      +     ++D+  ++G L  AIQ   
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 436 EMPERNIVS-WNALISAC 452
           EMP +   + W AL+ AC
Sbjct: 380 EMPIKPTAAVWGALLGAC 397



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 187/357 (52%), Gaps = 4/357 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N L++ Y K G+L  AR+LF+ M  R  V+WT LI GYSQ ++ ++A  L  +M 
Sbjct: 49  DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEM- 107

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKIR 122
              G  P+  T A+LL   S   + + L   Q+H   +++GY+S + +  +++D Y +  
Sbjct: 108 LRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCH 167

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A+ +F  M  K+ VS+NALI G+A++G  ++A  LF  M     KP+ FT+++ L 
Sbjct: 168 HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLC 227

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +  +  G+ VHA ++K       FV N LLD+Y+K   + +A+K+F  + + D VS
Sbjct: 228 ACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVS 287

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+T Y+ +   K +L+ F E+  TR   +   F  +L+  ++   L  GR       
Sbjct: 288 WNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK 347

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
                 ++    ++VD+  + G  + A +  + +    T   W A++ A     N+E
Sbjct: 348 KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNME 404



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 123/234 (52%), Gaps = 1/234 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +  ++  Y +  +L  A+ +F+ MV +  VSW  LI GY++K Q  +AF LF +
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +    P + T++++L  C+   +  +   VHA +IK+G   +  + N+L+D Y K  
Sbjct: 210 MLRE-NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A++VF  + ++D VS+N+++TG+++ GL + A++ F EM      P+D TF   L+
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A      +  GR     + K N    +     ++DL  +   +  A +   EMP
Sbjct: 329 ACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMP 382



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 5/194 (2%)

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           + L  + C+ N  A +    ++L+    L  L+ GK +H+ ++ S F  ++   + LL++
Sbjct: 1   MELIRQQCKNNAGAREICH-TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G L  A + F EM  R++V+W ALI+  +Q+   Q  L    +M++ G +P+  +L
Sbjct: 60  YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119

Query: 481 LSVLSACSHCGLIE--EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
            S+L A S  G  +  +G Q  + +  +Y          +++D+  R    +EA+ L+  
Sbjct: 120 ASLLKAASGVGSTDVLQGRQ-LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ-LIFD 177

Query: 539 MPFEPDEIMWSSVI 552
           +    +E+ W+++I
Sbjct: 178 VMVSKNEVSWNALI 191


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/661 (35%), Positives = 390/661 (59%), Gaps = 4/661 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           +L Q+HA ++  G      +   L+ +      +  AR+VF ++P+     +NA+I G++
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           +    ++A+ ++  MQ     P  FTF   L A  GL+ + +GR VHA V +  F  +VF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 211 VANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           V N L+ LY+K   +  AR +F    +PE   VS+  +++ YA N +  E+L++F +++ 
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                      ++L+      DL+ GR IH   +      E  +  SL  MYAKCG+   
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           AK +F  +   + + W AMIS Y + G   EA+++F EM   ++  D  +  S + A A+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           + SL   + ++ +V RS +  +VF  SAL+DM+AK GS++ A   F    +R++V W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I     +G A+  +  +  M + G  P+ V+ L +L AC+H G++ EG  +FN M   +K
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P+++HYA ++D+L R+G  D+A +++  MP +P   +W +++++C+ H+++E  + AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            QLF ++   +   YV +SN+YA A  W+ V++V+  M+E+G+ K    SWVE++ ++  
Sbjct: 515 QQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ HP+  EI R++E +   +K+ G+  +   +LHD ++E   E+L  HSER+AIA
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           + LI+TP+G+P+ + KNLRAC +CHAA KLISK+  REI VRD++RFHHFKDG CSC D+
Sbjct: 634 YGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693

Query: 749 W 749
           W
Sbjct: 694 W 694



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 218/447 (48%), Gaps = 4/447 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI      G++  AR++F+ +       W  +I GYS+ N F++A  ++ +M+    S P
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-P 117

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  LL  CS          VHA + + G+++ + + N L+  Y K R L  AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177

Query: 132 K--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +   +P++  VS+ A+++ +A+ G   EA+++F +M+ +  KP      + L+A   L D
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR +HA VVK        +  +L  +Y+K   V  A+ LF +M   + + +N MI+ 
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA N   +E++ +F E+            ++ +S  A    L+  R ++     +    +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V ++++L+DM+AKCG  E A+ +F        V W+AMI  Y   G   EA++L+  M R
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  TF  +L A      +  G    + +            + ++D+  ++G L  
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQN 455
           A +  K MP +  +  W AL+SAC ++
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 177/355 (49%), Gaps = 10/355 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K   L +AR +F  +   +RT VSWT ++  Y+Q  +  EA ++F  MR   
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-M 216

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN---SILIICNSLVDSYCKIRCL 124
              PD+V   ++L+  +      +   +HA ++K G      +LI  N++   Y K   +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQV 273

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F +M   + + +NA+I+G+AK G   EAI +F EM +   +P   +  +A+SA 
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +   R ++ +V ++++ ++VF+++AL+D+++K   V  AR +F    + D V ++
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  + + +E++ L+R ++      +   F  LL    +   ++ G     +    
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
               + +    ++D+  + G  ++A E+   +        W A++SA  +  ++E
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ LI  + K G++  AR +F+  +DR  V W+ +I GY    + REA  L+  M   GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GG 419

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ VTF  LL  C+      E       +     N        ++D   +   LD A 
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479

Query: 129 RVFKEMPQKDSVS-FNALITGFAKE 152
            V K MP +  V+ + AL++   K 
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKH 504


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/698 (36%), Positives = 395/698 (56%), Gaps = 42/698 (6%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRC---LDLARRVFKEMPQKDSVSFNALITGF 149
           +Q+HA  I  G +  +   + L+  +  +     LD +R +F ++   +   +N +I G+
Sbjct: 26  LQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGY 85

Query: 150 AKEGLNEEAIKLFVEMQHLGF-KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           ++     EAI L++ M   G   P++FTF   L++   L+ +  G +VH+ ++K  F  +
Sbjct: 86  SRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESD 145

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +FV NAL+ LYS    +  AR LF E    D VSYN MI  YA   Q + +L LF E+Q 
Sbjct: 146 LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQN 205

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI--VTTAISEVKVANSLVDMYAKCGRF 326
           +     +F F  L SV +   +  +G+QIH Q    + +  S + + +++VDMYAKCG  
Sbjct: 206 SGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLI 265

Query: 327 EEAKEIFANL-----------------------------SHI---STVPWTAMISAYVQK 354
             A+ +F+ +                             +H+     + WTAMIS Y Q 
Sbjct: 266 NIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQA 325

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMSNVFS 413
           G   EAL LF EM    I  D+ T  ++L A A L +  LGK+L+   I +G F  N   
Sbjct: 326 GQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTIL 385

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
            +A++DMYAK GS+  A++ F+ + +  +    +N++I+  AQ+G  +  +  F +++ +
Sbjct: 386 TAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIST 445

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +PD V+ + VL AC H GLIEEG + F SM   Y ++P+ EHY  MVD+L R GC +E
Sbjct: 446 GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEE 505

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+ +MPFE + ++W +++++CR H N++  + A  +L +ME  +  A YV +SNI A
Sbjct: 506 AYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEA-QHGARYVLLSNILA 564

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            A QWE   QV+K M + G+RK   +S++EL   +H F A+D+ HPQ  EI   ++++  
Sbjct: 565 DANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAM 624

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            +K  GY P+T+  + D DEE K   + YHSE+LA+AF L+       I ++KNLR C D
Sbjct: 625 RLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICAD 684

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A KL+S+I GREITVRD+ RFHHF++G CSC DFW
Sbjct: 685 CHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 231/478 (48%), Gaps = 39/478 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  +R LF+ +       W  +I GYS+ +  REA  L++ M   G + P+  TF  LL
Sbjct: 59  GLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLL 118

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
           + C+   +     +VH+ IIK G+ S L + N+L+  Y     L+LAR +F E   +D V
Sbjct: 119 NSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLV 178

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           S+N +I G+A+    E A+ LF EMQ+ G  P +FTF A  S    L +  +G+Q+HA V
Sbjct: 179 SYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQV 238

Query: 201 VKT--NFVENVFVANALLDLYSKHDC--------------------------------VV 226
            K   +   N+ + +A++D+Y+K                                   + 
Sbjct: 239 YKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEIN 298

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            ARKLF  M E D +S+  MI+ Y+   Q  E+L+LF+E++       +     +LS  A
Sbjct: 299 VARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACA 358

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLV-DMYAKCGRFEEAKEIFANLSH--ISTVP 343
                 +G++++ Q I     ++  +  + V DMYAKCG  + A EIF  +     +   
Sbjct: 359 RLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFV 418

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           + +MI+   Q G  E A+ +F E+    +  D+ TF  +L A      +  GK+L   + 
Sbjct: 419 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 478

Query: 404 RS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            + G    +     ++D+  + G L++A    ++MP E N V W AL+SAC  +G+ +
Sbjct: 479 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVK 536



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 171/358 (47%), Gaps = 17/358 (4%)

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGR---FEEAKEIFANLSHISTVPWTAMISA 350
           G QIH QTIV     ++   + L+  ++  G     + ++ +F+ +   +   W  MI  
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 351 YVQKGNLEEALNLFIEMCRANIS-ADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           Y +  N  EA+ L++ M    I+  +  TF  +L + A L+SL  G ++HS +I+ GF S
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           ++F  +AL+ +Y+  G+L  A   F E   R++VS+N +I   A+    ++ L  F +M 
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK-LRPKKEHY---ASMVDILCR 525
            SG  PD  + +++ S CS       G Q      Q YK LR    +    +++VD+  +
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIH---AQVYKNLRSIDSNILLKSAIVDMYAK 261

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
            G  + AE++ + M        WSS++  C   +  E     A +LF     RD   + A
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMV--CGYARCGEI--NVARKLFNHMHERDVISWTA 317

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFTANDELHPQTNE 641
           M + Y+ AGQ     ++ K M   G++  +VT  + +   +++  F     L+ Q  E
Sbjct: 318 MISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 14/246 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++ GY + G +  AR+LFN M +R  +SWT +I GYSQ  Q  EA +LF +M    G  P
Sbjct: 287 MVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEAL-GIKP 345

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRCLDLARRV 130
           D VT   +LS C+     +   +++   I+ G +N   I+  +++D Y K   +D A  +
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEI 405

Query: 131 FKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F+ + +  K    FN++I G A+ GL E AI +F E+   G KP + TF   L A     
Sbjct: 406 FRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSG 465

Query: 189 DIALGRQV-----HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVS 242
            I  G+++     +A+ +K            ++DL  ++ C+ EA  L  +MP E + V 
Sbjct: 466 LIEEGKKLFESMFNAYGIKPQMEH----YGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI 521

Query: 243 YNVMIT 248
           +  +++
Sbjct: 522 WRALLS 527



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 47/266 (17%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ----TFKEMPERNIVSWN 446
           S   G Q+H+  I +G    +FS S L+  ++  GS KD +      F ++   N+  WN
Sbjct: 21  SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGS-KDGLDHSRLLFSQIDCPNLFMWN 79

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            +I   +++ + +  +  +  M+  G   P++ +   +L++C+    +E G         
Sbjct: 80  TMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG--------- 130

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
                                    E    + +  FE D  + +++I+   +  NL  A+
Sbjct: 131 ------------------------HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLAR 166

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
                LF    +RD   Y  M   YA   Q ES   +   M+  G+     +++V L S 
Sbjct: 167 T----LFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILP-DEFTFVALFSV 221

Query: 626 VHVF---TANDELHPQTNEIRRKIEN 648
             V        ++H Q  +  R I++
Sbjct: 222 CSVLNEPNVGKQIHAQVYKNLRSIDS 247


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/639 (37%), Positives = 373/639 (58%), Gaps = 37/639 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+++ +Y K   ++  R VF +M   D+VS+N +I GF+  G + +A++ FV MQ  GF+
Sbjct: 93  NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFE 152

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
            +D+T  + L A   L DI  G+Q+H  +V T+  E+VFV NAL ++Y+K   + +AR L
Sbjct: 153 STDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWL 212

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  M   + VS+N MI+ Y  N Q +   KLF E+Q +     Q   S +LS        
Sbjct: 213 FDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA------- 265

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                                       Y +CG  +EA + F  +     V WT M+   
Sbjct: 266 ----------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGC 297

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  E+AL LF EM   N+  D  T +S++ + A LASL  G+ +H   +  G   ++
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL 357

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SAL+DMY+K G   DA   FK M  RN++SWN++I   AQNG     L  +E+M+  
Sbjct: 358 LVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHE 417

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
             +PD+++ + VLSAC H GL+E G  YF S+++ + + P  +HY+ M+++L R+G  D+
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDK 477

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+  M FEP+ ++WS++++ CRI+ ++   + AA  LF+++   +A PY+ +SNIYA
Sbjct: 478 AVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDP-HNAGPYIMLSNIYA 536

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+ V+ V+  M+   ++K  AYSW+E+ ++VH F A D  H +T +I  ++  L++
Sbjct: 537 ACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIK 596

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACT 710
           ++++ G+ PDT+  LHD  EE K +S+ YHSE+LA+AF LI  P G +PI +MKN+R C 
Sbjct: 597 KLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCG 656

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K +SKI  R I +RD +RFHHF +G CSC+D W
Sbjct: 657 DCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 212/459 (46%), Gaps = 38/459 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N ++S Y KSGN+   R +F+ M    AVS+  +I G+S      +A + F
Sbjct: 84  MSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFF 143

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M+ +G    DY T  ++L  CS+        Q+H  I+       + + N+L + Y K
Sbjct: 144 VRMQEEGFESTDY-THVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAK 202

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD AR +F  M  K+ VS+N++I+G+ + G  E   KLF EMQ  G  P   T +  
Sbjct: 203 CGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNI 262

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA                                   Y +   + EA K F E+ E D 
Sbjct: 263 LSA-----------------------------------YFQCGYIDEACKTFREIKEKDK 287

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +  M+   A N + +++L LFRE+         F  S+++S  A    L  G+ +H +
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGK 347

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            ++     ++ V+++LVDMY+KCG   +A  +F  +   + + W +MI  Y Q G   EA
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEA 407

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLD 419
           L L+ EM   N+  D  TF  +L A      +  G+     + +   M+  F   S +++
Sbjct: 408 LALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMIN 467

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +  ++G +  A+   K M  E N + W+ L+S C  N D
Sbjct: 468 LLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCD 506



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 194/441 (43%), Gaps = 85/441 (19%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           +VF  NA+L  YSK   V + R +F +M   D VSYN +I  ++ N    ++L+ F  +Q
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
              F+ + +   ++L   +  LD++ G+QIH + + T+    V V N+L +MYAKCG  +
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ +F  + + + V W +MIS Y+Q G  E    LF EM  + +  DQ T ++IL A  
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
                                            Y + G + +A +TF+E+ E++ V W  
Sbjct: 266 ---------------------------------YFQCGYIDEACKTFREIKEKDKVCWTT 292

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-------------------- 487
           ++  CAQNG  +  L  F +M+    +PD+ ++ SV+S+C                    
Sbjct: 293 MMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFG 352

Query: 488 ---------------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
                          S CG   +    F  M  +  +      + SM+    ++G   EA
Sbjct: 353 VDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVIS-----WNSMILGYAQNGKDLEA 407

Query: 533 EKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVA 585
             L  +M  E   PD I +  V+++C +H  L   ++     + + K+    P    Y  
Sbjct: 408 LALYEEMLHENLKPDNITFVGVLSAC-MHAGL--VERGQGYFYSISKIHGMNPTFDHYSC 464

Query: 586 MSNIYAVAGQWESVSQVKKAM 606
           M N+   AG  +    + K+M
Sbjct: 465 MINLLGRAGYMDKAVDLIKSM 485



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 4/98 (4%)

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
           ++ F  + LL +YAKSG+L DA   F +M  R++ SWNA++SA +++G+ +     F+ M
Sbjct: 56  TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM 115

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
                  D+VS  +V++  S  G   + L++F  M ++
Sbjct: 116 SVH----DAVSYNTVIAGFSGNGCSSQALEFFVRMQEE 149


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 359/574 (62%), Gaps = 5/574 (0%)

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           TF  A +    L D    R+VHA +  + F  + F+ N+L+ LY K   V+EARK+F EM
Sbjct: 56  TFITACAQSKNLED---ARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEM 112

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VS+  +I  YA N+  +E++ L   +   RF  + F F++LL       D  IGR
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGR 172

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           QIH   +      +V V ++L+DMYA+CG  + A  +F  L   + V W A+IS + +KG
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
           + E AL  F EM R    A   T++S+  + A L +L  GK +H+ +I+S      F+G+
Sbjct: 233 DGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN 292

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            LLDMYAKSGS+ DA + F  + ++++V+WN +++A AQ G  +  +  FE+M +SG   
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ L +L+ACSH GL++EG +YF  M ++Y L P+ +H+ ++V +L R+G  + A   
Sbjct: 353 NQVTFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFVTVVALLGRAGLLNFALVF 411

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D+ P V + NIYA  GQ
Sbjct: 412 IFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP-DDSGPPVLLYNIYASTGQ 470

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W++ ++V++ M+  GV+K  A SWVE+++ VH+F AND+ HP+  EI +    + ++++K
Sbjct: 471 WDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRK 530

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
           EGY PD    L   D++ +  +L+YHSE+LA+AFALI  P G+ I +MKN+R C DCH+A
Sbjct: 531 EGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSA 590

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            K ISK+ GREI VRD++RFHHF +G CSC D+W
Sbjct: 591 FKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 210/400 (52%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G   P    + T ++ C++     +  +VHA +    +     + NSL+  YCK
Sbjct: 39  LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR+VF EM +KD VS+ +LI G+A+  + EEAI L   M    FKP+ FTFA+ 
Sbjct: 99  CGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A    AD  +GRQ+HA  VK ++ E+V+V +ALLD+Y++   +  A  +F ++   +G
Sbjct: 159 LKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNG 218

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I+ +A     + +L  F E+    F+ + F +S++ S +A    L+ G+ +H  
Sbjct: 219 VSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAH 278

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +         N+L+DMYAK G   +A+++F  +     V W  M++A+ Q G  +EA
Sbjct: 279 MIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEA 338

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++ F EM ++ I  +Q TF  IL A +    +  GK+    +        +     ++ +
Sbjct: 339 VSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVAL 398

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G L  A+    +MP E     W AL++AC  + +A+
Sbjct: 399 LGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAK 438



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 161/287 (56%), Gaps = 1/287 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G++  AR++F+ M  +  VSWT LI GY+Q +   EA  L   M   G  
Sbjct: 90  NSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGM-LKGRF 148

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL        +    Q+HA  +K  ++  + + ++L+D Y +   +D+A  
Sbjct: 149 KPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATA 208

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI+GFA++G  E A+  F EM   GF+ + FT+++  S+   L  
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGA 268

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA ++K+      F  N LLD+Y+K   +++ARK+F  + + D V++N M+T 
Sbjct: 269 LEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTA 328

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           +A     KE++  F E++ +    +Q  F  +L+  ++   ++ G++
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKR 375



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 153/279 (54%), Gaps = 6/279 (2%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           + T ++  A   +L+  R++H     +    +  + NSL+ +Y KCG   EA+++F  + 
Sbjct: 54  YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V WT++I+ Y Q    EEA+ L   M +     +  TFAS+L+A+   A   +G+Q
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+  ++  +  +V+ GSALLDMYA+ G +  A   F ++  +N VSWNALIS  A+ GD
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L +F +M+++G++    +  SV S+ +  G +E+G      M    K R K   +A
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI---KSRQKMTAFA 290

Query: 518 --SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +++D+  +SG   +A K+  ++  + D + W++++ +
Sbjct: 291 GNTLLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTA 328


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/743 (35%), Positives = 411/743 (55%), Gaps = 4/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-G 68
           N +I+ Y K G L  A ELF+ M ++  +SW  LI G+S+   + EA++ F  +   G G
Sbjct: 249 NAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDG 308

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T  TLL  CS     +  + +H   +K G    L++CN+L+D Y K  CL  A 
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF--VEMQHLGFKPSDFTFAAALSAGVG 186
            +F+++  K  VS+N++I  +++EG   E   L   + M+    + ++ T    L A + 
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLE 428

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            +++   R +H + ++ +F     + NA +  Y+K   +V A  +F  M      S+N +
Sbjct: 429 ESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAV 488

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +A N    ++L  + E+         F   +LL        LQ G++IH   +    
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGL 548

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                VA SL+ +Y  C +    +  F  +   ++V W AM+S Y Q     EAL+LF +
Sbjct: 549 EMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQ 608

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D+   ASIL A ++L++L LGK++H F +++  M + F   +L+DMYAKSG 
Sbjct: 609 MLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGF 668

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  + + F  +  + + SWN +I+    +G     ++ FEDM +S  QPD  + L VL A
Sbjct: 669 LGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQA 728

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C H GL+ EGL Y   M   YKL P+ EHYA ++D+L R+G  +EA   + +MP EPD  
Sbjct: 729 CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAK 788

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WSS+++S   + +LE  +K A++L  +E    A  Y+ +SN+YA AG+W+ V  V++ M
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEA-NKADSYILLSNLYATAGKWDVVRMVRQKM 847

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           ++  ++K    SW+EL+ KV+ F A +  +P ++EIR+    L +++ + GY PD SC L
Sbjct: 848 KDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVL 907

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+ +E  K + LK HSE++AI F  +NT EG+ + + KNLR C DCH A K ISK   RE
Sbjct: 908 HELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKRE 967

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I +RD+ RFHHFK G CSC D+W
Sbjct: 968 IVIRDNKRFHHFKKGICSCGDYW 990



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 268/575 (46%), Gaps = 10/575 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y   G    +R +F+ ++++    W  L+ GY +   + EA   F+++ +     P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  L+  C+     +    VH   +K G    L + N+++  Y K   LD A  +F
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLAD 189
            +MP+++ +S+N+LI GF++ G   EA + F  +     G  P   T    L    G  +
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G  +H   VK   V  + V NAL+D+YSK  C+ EA  LF ++     VS+N MI  
Sbjct: 329 VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388

Query: 250 YAWNEQYKESLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           Y+      E+  L R++       + ++     LL     + +L   R +H  ++  +  
Sbjct: 389 YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  + N+ +  YAKCG    A+ +F  ++  S   W A+I  + Q G+  +AL+ + EM
Sbjct: 449 YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  I  D  +  S+L A   L  L  GK++H FV+R+G   N F   +LL +Y      
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                 F+ M ++N V WNA++S  +QN      L  F  M+  G +PD +++ S+L AC
Sbjct: 569 FYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S    +  G +  +    K  L        S++D+  +SG    ++++  ++  + +   
Sbjct: 629 SQLSALGLG-KEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK-EVAS 686

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           W+ +I    +H         A +LF+  K  D  P
Sbjct: 687 WNVMITGFGVHGQ----GNKAVELFEDMKRSDKQP 717



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 154/305 (50%), Gaps = 6/305 (1%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           ++ +GR++   +  ++     FV N  L+ +YS     +E+R +F  +   +   +N ++
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 248 TCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y  NE Y E++  F EL   T F    F F  L+     K D+ +G+ +H   +    
Sbjct: 182 SGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGL 241

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           I ++ V N+++ +Y KCG  +EA E+F  +   + + W ++I  + + G   EA   F  
Sbjct: 242 IMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRS 301

Query: 367 MCRA--NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +  +   +  D AT  ++L   +   ++ +G  +H   ++ G +  +   +AL+DMY+K 
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC 361

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLS 482
           G L +A   F+++  +++VSWN++I A ++ G    T      M   +   + + V++L+
Sbjct: 362 GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILN 421

Query: 483 VLSAC 487
           +L AC
Sbjct: 422 LLPAC 426



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 150/278 (53%), Gaps = 6/278 (2%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI 339
           LL       +++IGR++     V++  S   V N+ L+ MY+ CG   E++ +F  L + 
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQL 398
           +   W A++S YV+    +EA++ F+E+        D  TF  +++A      + LGK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H   ++ G + ++F G+A++ +Y K G L +A++ F +MPE+N++SWN+LI   ++NG  
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 459 QATLKSFEDMVQS--GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
               ++F  +++S  G  PD  +++++L  CS  G ++ G+   + M  K  L  +    
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +++D+  + GC  EA  L  ++      + W+S+I +
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGA 388


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/779 (34%), Positives = 416/779 (53%), Gaps = 47/779 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++  S N +++GY  S  +  AR LF  M +R  VSWT++I GY    Q   A+ +F
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G + P+     ++LS          L  +H  + K G+   +++  ++++ Y K
Sbjct: 212 RTMLCEGMT-PEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK 270

Query: 121 -IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +  LD A + F+ M  ++  +++ +I   ++ G  ++A  ++ +   L   PS  +   
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVY-QRDPLKSVPSRTSMLT 329

Query: 180 ALSAGVGLADIA--LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            L A  G  D A  L  Q+H          NV   NA++  Y +++ V EA  LF  MP 
Sbjct: 330 GL-ARYGRIDDAKILFDQIHE--------PNVVSWNAMITGYMQNEMVDEAEDLFNRMPF 380

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + +S+  MI  YA N + +++L   + L       S    ++     +N   L+ G+Q+
Sbjct: 381 RNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQV 440

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKC-------------------------------GRF 326
           H+  +         V N+L+ +Y K                                  F
Sbjct: 441 HSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLF 500

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           +EA+++F N+     V WT +ISA  Q     EA+ +F  M       +      +L  S
Sbjct: 501 DEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLS 560

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
             L +  LG+Q+H+  I+ G  S +   +AL+ MY K  S  D+++ F  M ER+I +WN
Sbjct: 561 GNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWN 619

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
            +I+  AQ+G  +  ++ ++ MV +G  P+ V+ + +L ACSH GL++EG Q+F SM+  
Sbjct: 620 TIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSD 679

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           Y L P  EHYA MVD+L R+G    AE  +  MP EPD ++WS+++ +C+IHKN+E  ++
Sbjct: 680 YGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRR 739

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           AA++LF +E   +A  YV +SNIY+  G W+ V++V+K M+ERGV K    SW+++K+K+
Sbjct: 740 AAEKLFSIEP-SNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKM 798

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F   DE H Q   I   +  L   +K  GY PDT   LHD DEE K  SL YHSE+LA
Sbjct: 799 HSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLA 858

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           +A+ L+ TP+G PI +MKNLR C DCH  IK +S +T REI VRD +RFHHF++G CSC
Sbjct: 859 VAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 236/512 (46%), Gaps = 26/512 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++ N +I  Y  +G     R L +++      + TIL+ GY++  + R+A ++F
Sbjct: 59  MPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVRDARRVF 118

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                DG    + V +  +++ C      N  I +   +     +  +   N+++  YC 
Sbjct: 119 -----DGMGVRNTVAWNAMVT-CY---VQNGDITLARKLFDAMPSRDVSSWNTMLTGYCH 169

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + ++ AR +F+ MP+++ VS+  +I+G+     +  A  +F  M   G  P      + 
Sbjct: 170 SQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSV 229

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVD 239
           LSA   L    +   +H  V KT F  +V V  A+L+ Y+K   +++ A K F  M   +
Sbjct: 230 LSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN 289

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             +++ +I   +   +  ++  +++          + P  ++ S  +    L    +I  
Sbjct: 290 EYTWSTIIAALSQAGRIDDAFAVYQ----------RDPLKSVPSRTSMLTGLARYGRIDD 339

Query: 300 QTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
             I+   I E  V   N+++  Y +    +EA+++F  +   +T+ W  MI+ Y + G  
Sbjct: 340 AKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRS 399

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E+AL     + R  +    ++  S   A + + +L  GKQ+HS  +++G   N +  +AL
Sbjct: 400 EQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNAL 459

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + +Y K  S+    Q F  M  ++ VS+N+ +SA  QN         F +M      PD 
Sbjct: 460 ITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDV 515

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           VS  +++SAC+      E ++ F SM  + +L
Sbjct: 516 VSWTTIISACAQADQGNEAVEIFRSMLHEREL 547



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 196/491 (39%), Gaps = 79/491 (16%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  MP +D +++N++I  +   G+ +    L   +     +      +    AG  
Sbjct: 52  AREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAG-- 109

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE------------ 234
              +   R+V         V N    NA++  Y ++  +  ARKLF              
Sbjct: 110 --RVRDARRV----FDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTM 163

Query: 235 -------------------MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
                              MPE +GVS+ VMI+ Y   EQ+  +  +FR +        Q
Sbjct: 164 LTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQ 223

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK-CGRFEEAKEIFA 334
               ++LS V +     I   IH     T    +V V  ++++ Y K     + A + F 
Sbjct: 224 PNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFE 283

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            ++  +   W+ +I+A  Q G +++A  ++      ++ +  +    + R      +  L
Sbjct: 284 GMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKIL 343

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
             Q+H          NV S +A++  Y ++  + +A   F  MP RN +SW  +I+  A+
Sbjct: 344 FDQIHE--------PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY----------FNS-- 502
           NG ++  L S + + + G  P   SL S   ACS+   +E G Q           FNS  
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455

Query: 503 ------MTQKYKLRPKKEH------------YASMVDILCRSGCFDEAEKLMAQMPFEPD 544
                 +  KY+                   Y S +  L ++  FDEA  +   MP  PD
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPD 514

Query: 545 EIMWSSVINSC 555
            + W+++I++C
Sbjct: 515 VVSWTTIISAC 525



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 151/396 (38%), Gaps = 126/396 (31%)

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           EAR++F  MP  D +++N MI  Y  N        L                        
Sbjct: 51  EAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL------------------------ 86

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
              D   G  + T TI             L+  YA+ GR  +A+ +F  +   +TV W A
Sbjct: 87  --ADAISGGNLRTGTI-------------LLSGYARAGRVRDARRVFDGMGVRNTVAWNA 131

Query: 347 MISAYVQKGN-------------------------------LEEALNLFIEMCRAN---- 371
           M++ YVQ G+                               +EEA NLF  M   N    
Sbjct: 132 MVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSW 191

Query: 372 ---------------------------ISADQATFASILRASAELASLSLGKQLHSFVIR 404
                                      ++ +Q    S+L A   L    + + +H  V +
Sbjct: 192 TVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHK 251

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKD-AIQTFKEMPERNIVSWNALISACAQNG---DAQA 460
           +GF  +V  G+A+L+ Y K  ++ D A++ F+ M  RN  +W+ +I+A +Q G   DA A
Sbjct: 252 TGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFA 311

Query: 461 TLKSFEDMVQSGYQPDSV----SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
                       YQ D +    S  S+L+  +  G I++    F+ + +     P    +
Sbjct: 312 V-----------YQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHE-----PNVVSW 355

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            +M+    ++   DEAE L  +MPF  + I W+ +I
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMI 390



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 43/186 (23%)

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
            + GR  EA+E+F ++     + W +MI AY   G  +   +L          AD     
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL----------AD----- 88

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
                     ++S G              N+ +G+ LL  YA++G ++DA + F  M  R
Sbjct: 89  ----------AISGG--------------NLRTGTILLSGYARAGRVRDARRVFDGMGVR 124

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           N V+WNA+++   QNGD     K F+ M       D  S  ++L+   H  L+EE    F
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSR----DVSSWNTMLTGYCHSQLMEEARNLF 180

Query: 501 NSMTQK 506
             M ++
Sbjct: 181 ERMPER 186


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/785 (33%), Positives = 430/785 (54%), Gaps = 41/785 (5%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++T   N +I+ Y+K G +  A E+F  M     VS++ LI  +S+ N+  EA +LF  
Sbjct: 134 GEDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFR 193

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G  +P+  +F  +L+ C         +QVHA  IK GY+ ++ + N+L+  Y K  
Sbjct: 194 MRISG-IEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCG 252

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGFKPSDFTFAAAL 181
           CLD A  +F EMPQ+D  S+N +I+   K    E+A++LF V  Q+ GFK   FT +  L
Sbjct: 253 CLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLL 312

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK-------------------- 221
           +A         GR++HA+ ++     N+ V+NA++  Y++                    
Sbjct: 313 TACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDII 372

Query: 222 -----------HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                         V  A  +F +MPE + VSYN ++T +  N +  ++L LF  +    
Sbjct: 373 TWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEG 432

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + + F  + +++     L L+I RQIH   I     S   +  +L+DM +KCGR ++A 
Sbjct: 433 AELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDAD 492

Query: 331 EIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEMCRA--NISADQATFASILRAS 386
            +F +LS    +++  T+MI  Y + G  EEA+ LF   C++   +  D+  F SIL   
Sbjct: 493 RMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYR-CQSEGTMVLDEVAFTSILGVC 551

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
             L    +GKQ+H   +++GF + +  G++++ MY+K  ++ DAI+ F  MP  ++VSWN
Sbjct: 552 GTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWN 611

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC--SHCGLIEEGLQYFNSMT 504
            LI+    +      L  +  M ++G +PD+++ + ++SA   +   L++E    F SM 
Sbjct: 612 GLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMK 671

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
             + L P  EHYAS+V +L   G  +EAE+L+ +MPF+P+  +W ++++ CR+H N    
Sbjct: 672 MIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIG 731

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           K+ A  +  ME  RD + YV +SN+YA +G+W     V++ MR+RG+RK    SWV +K 
Sbjct: 732 KRVAKHIIGMEP-RDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKK 790

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
           ++H F A D+ HPQ+N+I   ++ L+ +  K GY+PD S  L + +E+ K + L YHS +
Sbjct: 791 QLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAK 850

Query: 685 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCS 744
           LA  + L+ T  G PI V+KN+  C DCH  +K  + +T REI  RD+S FH F +G CS
Sbjct: 851 LAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCS 910

Query: 745 CRDFW 749
           C+ +W
Sbjct: 911 CKGYW 915



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 251/531 (47%), Gaps = 39/531 (7%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA I+K G ++ L   N+++ +Y K+  +  A  VF  M   D VS++ALI+ F+K   
Sbjct: 126 LHASILKLGEDTHL--GNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNR 183

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             EAI+LF  M+  G +P++++F A L+A +   ++ +G QVHA  +K  + + VFVANA
Sbjct: 184 ETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANA 243

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDR 273
           L+ LY K  C+  A  LF EMP+ D  S+N MI+       Y+++L+LFR L Q   F  
Sbjct: 244 LIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKA 303

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            QF  STLL+  A       GR+IH   I     + + V+N+++  Y +CG       +F
Sbjct: 304 DQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALF 363

Query: 334 ANLSHISTVPWTAMISAYVQKGNLE-------------------------------EALN 362
             +     + WT MI+AY++ G ++                               +ALN
Sbjct: 364 ERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALN 423

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF+ M +        T   ++ A   L  L + +Q+H F+I+ GF SN    +AL+DM +
Sbjct: 424 LFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCS 483

Query: 423 KSGSLKDAIQTFKEMPER--NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP-DSVS 479
           K G + DA + F+ +     N +   ++I   A+NG  +  +  F      G    D V+
Sbjct: 484 KCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVA 543

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             S+L  C   G  E G Q  +    K     +     S++ +  +    D+A K    M
Sbjct: 544 FTSILGVCGTLGFHEVGKQ-IHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTM 602

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           P   D + W+ +I    +H+  + A      + K     DA  +V + + Y
Sbjct: 603 PGH-DVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAY 652



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 22/364 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++   +I+ Y++ G +  A ++FN M ++ +VS+  L+ G+ + N+  +A  LF
Sbjct: 366 MPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLF 425

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M  +G    D+ T   +++ C          Q+H  IIKFG+ S   I  +L+D   K
Sbjct: 426 VRMVQEGAELTDF-TLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSK 484

Query: 121 IRCLDLARRVFKEMPQK--DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD---F 175
              +D A R+F+ +     +S+   ++I G+A+ GL EEAI LF   Q  G    D   F
Sbjct: 485 CGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAF 544

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T    +   +G  ++  G+Q+H   +KT F   + V N+++ +YSK   + +A K F  M
Sbjct: 545 TSILGVCGTLGFHEV--GKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTM 602

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV----ANKLDL 291
           P  D VS+N +I     + Q  E+L ++  ++          F  ++S      +N LD 
Sbjct: 603 PGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLD- 661

Query: 292 QIGRQIHTQTIVTTAISEVKVAN----SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTA 346
               +  +  +    I +++  +    SLV +    G  EEA+E+   +     V  W A
Sbjct: 662 ----ECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRA 717

Query: 347 MISA 350
           ++  
Sbjct: 718 LLDG 721



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           ++LR S +   + L + LH+ +++ G   +   G+A++  Y K G + DA + F  M   
Sbjct: 109 NLLRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTP 166

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++VS++ALIS+ ++       ++ F  M  SG +P+  S +++L+AC     +E GLQ  
Sbjct: 167 DVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQ-V 225

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
           +++  K           +++ +  + GC D A  L  +MP + D   W+++I+S  + K 
Sbjct: 226 HALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMP-QRDIASWNTMISS--LVKG 282

Query: 561 LEFAKKAADQLFKM 574
           L + K  A +LF++
Sbjct: 283 LSYEK--ALELFRV 294


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/743 (35%), Positives = 411/743 (55%), Gaps = 4/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-G 68
           N +I+ Y K G L  A ELF+ M ++  +SW  LI G+S+   + EA++ F  +   G G
Sbjct: 249 NAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDG 308

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T  TLL  CS     +  + +H   +K G    L++CN+L+D Y K  CL  A 
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF--VEMQHLGFKPSDFTFAAALSAGVG 186
            +F+++  K  VS+N++I  +++EG   E   L   + M+    + ++ T    L A + 
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLE 428

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            +++   R +H + ++ +F     + NA +  Y+K   +V A  +F  M      S+N +
Sbjct: 429 ESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAV 488

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +A N    ++L  + E+         F   +LL        LQ G++IH   +    
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGL 548

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                VA SL+ +Y  C +    +  F  +   ++V W AM+S Y Q     EAL+LF +
Sbjct: 549 EMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQ 608

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D+   ASIL A ++L++L LGK++H F +++  M + F   +L+DMYAKSG 
Sbjct: 609 MLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGF 668

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  + + F  +  + + SWN +I+    +G     ++ FEDM +S  QPD  + L VL A
Sbjct: 669 LGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQA 728

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C H GL+ EGL Y   M   YKL P+ EHYA ++D+L R+G  +EA   + +MP EPD  
Sbjct: 729 CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAK 788

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WSS+++S   + +LE  +K A++L  +E    A  Y+ +SN+YA AG+W+ V  V++ M
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEA-NKADSYILLSNLYATAGKWDVVRMVRQKM 847

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           ++  ++K    SW+EL+ KV+ F A +  +P ++EIR+    L +++ + GY PD SC L
Sbjct: 848 KDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVL 907

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+ +E  K + LK HSE++AI F  +NT EG+ + + KNLR C DCH A K ISK   RE
Sbjct: 908 HELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKRE 967

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I +RD+ RFHHFK G CSC D+W
Sbjct: 968 IVIRDNKRFHHFKKGICSCGDYW 990



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 268/575 (46%), Gaps = 10/575 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y   G    +R +F+ ++++    W  L+ GY +   + EA   F+++ +     P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  L+  C+     +    VH   +K G    L + N+++  Y K   LD A  +F
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLAD 189
            +MP+++ +S+N+LI GF++ G   EA + F  +     G  P   T    L    G  +
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G  +H   VK   V  + V NAL+D+YSK  C+ EA  LF ++     VS+N MI  
Sbjct: 329 VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388

Query: 250 YAWNEQYKESLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           Y+      E+  L R++       + ++     LL     + +L   R +H  ++  +  
Sbjct: 389 YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +  + N+ +  YAKCG    A+ +F  ++  S   W A+I  + Q G+  +AL+ + EM
Sbjct: 449 YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  I  D  +  S+L A   L  L  GK++H FV+R+G   N F   +LL +Y      
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                 F+ M ++N V WNA++S  +QN      L  F  M+  G +PD +++ S+L AC
Sbjct: 569 FYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S    +  G +  +    K  L        S++D+  +SG    ++++  ++  + +   
Sbjct: 629 SQLSALGLG-KEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK-EVAS 686

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           W+ +I    +H         A +LF+  K  D  P
Sbjct: 687 WNVMITGFGVHGQ----GNKAVELFEDMKRSDKQP 717



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 154/305 (50%), Gaps = 6/305 (1%)

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           ++ +GR++   +  ++     FV N  L+ +YS     +E+R +F  +   +   +N ++
Sbjct: 122 NVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALV 181

Query: 248 TCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y  NE Y E++  F EL   T F    F F  L+     K D+ +G+ +H   +    
Sbjct: 182 SGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGL 241

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           I ++ V N+++ +Y KCG  +EA E+F  +   + + W ++I  + + G   EA   F  
Sbjct: 242 IMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRS 301

Query: 367 MCRA--NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +  +   +  D AT  ++L   +   ++ +G  +H   ++ G +  +   +AL+DMY+K 
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKC 361

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLS 482
           G L +A   F+++  +++VSWN++I A ++ G    T      M   +   + + V++L+
Sbjct: 362 GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILN 421

Query: 483 VLSAC 487
           +L AC
Sbjct: 422 LLPAC 426



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 150/278 (53%), Gaps = 6/278 (2%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI 339
           LL       +++IGR++     V++  S   V N+ L+ MY+ CG   E++ +F  L + 
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQL 398
           +   W A++S YV+    +EA++ F+E+        D  TF  +++A      + LGK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H   ++ G + ++F G+A++ +Y K G L +A++ F +MPE+N++SWN+LI   ++NG  
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 459 QATLKSFEDMVQS--GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
               ++F  +++S  G  PD  +++++L  CS  G ++ G+   + M  K  L  +    
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVC 351

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            +++D+  + GC  EA  L  ++      + W+S+I +
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGA 388


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/555 (40%), Positives = 353/555 (63%), Gaps = 2/555 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +HA +  + F  +VF+ N+L+ LY K   V +AR++F  MP  D  S+  +I  YA N
Sbjct: 84  RAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQN 143

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           +   E+L L   +   RF  + F F++LL          IG QIH  T+      +V V 
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG 203

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           ++L+DMYA+CGR + A  +F  L   + V W A+I+ + +KG+ E  L +F EM R    
Sbjct: 204 SALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           A   T++S+  A A + +L  GK +H+ +I+SG   + F G+ +LDMYAKSGS+ DA + 
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKV 323

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  + ++++V+WN++++A AQ G  +  +  FE+M + G   + ++ LS+L+ACSH GL+
Sbjct: 324 FDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLV 383

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           +EG QYF+ M ++Y L P+ +HY ++VD+L R+G  ++A   + +MP +P   +W +++ 
Sbjct: 384 KEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           SCR+HKN +  + AAD +F+++   D  P V + NIYA  GQW++ ++V+K M+  GV+K
Sbjct: 443 SCRMHKNAKIGQFAADHVFELDP-DDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKK 501

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
             A SWVE+++ VH+F AND+ HP++ EI +K E +  +++K GY P+T   L   DE+ 
Sbjct: 502 EPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQE 561

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           +   L+YHSE++A+AFALIN P G+ I +MKN+R C DCH+A + ISK+  REI VRD++
Sbjct: 562 RQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTN 621

Query: 734 RFHHFKDGFCSCRDF 748
           RFHHF  G CSC D+
Sbjct: 622 RFHHFSSGSCSCGDY 636



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 206/385 (53%), Gaps = 1/385 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           + +L++ C+   + ++   +HA +    +   + + NSL+  YCK   +  ARRVF  MP
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D  S+ +LI G+A+  + +EA+ L   M    FKP+ FTFA+ L A    A   +G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA  VK ++ ++V+V +ALLD+Y++   +  A  +F ++   +GVS+N +I  +A    
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            + +L +F E+Q   F+ + F +S++ S +A    L+ G+ +H   I +       V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           ++DMYAK G   +A+++F  +     V W +M++A+ Q G   EA+  F EM +  +  +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q TF SIL A +    +  GKQ    +        +     ++D+  ++G L DA+    
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 426

Query: 436 EMPERNIVS-WNALISACAQNGDAQ 459
           +MP +   + W AL+ +C  + +A+
Sbjct: 427 KMPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 183/342 (53%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G +A AR +F+ M  R   SWT LI GY+Q +   EA  L   M   G  
Sbjct: 103 NSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM-LRGRF 161

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL       ++    Q+HA  +K+ ++  + + ++L+D Y +   +D+A  
Sbjct: 162 KPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIA 221

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI GFA++G  E  + +F EMQ  GF+ + FT+++  SA  G+  
Sbjct: 222 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA ++K+    + FV N +LD+Y+K   +++ARK+F  + + D V++N M+T 
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A     +E++  F E++      +Q  F ++L+  ++   ++ G+Q            E
Sbjct: 342 FAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPE 401

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           +    ++VD+  + G   +A   IF      +   W A++ +
Sbjct: 402 IDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGS 443



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 150/277 (54%), Gaps = 2/277 (0%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           + +L++  A    L   R IH     +     V + NSL+ +Y KCG   +A+ +F  + 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
                 WT++I+ Y Q    +EAL L   M R     +  TFAS+L+A+   AS  +G+Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+  ++  +  +V+ GSALLDMYA+ G +  AI  F ++  +N VSWNALI+  A+ GD
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            + TL  F +M ++G++    +  SV SA +  G +E+G ++ ++   K   R       
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQG-KWVHAHMIKSGERLSAFVGN 305

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +++D+  +SG   +A K+  ++  + D + W+S++ +
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTA 341



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           ++A    + S++ A A   SL   + +H+ +  S F  +VF  ++L+ +Y K G++ DA 
Sbjct: 60  LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADAR 119

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  MP R++ SW +LI+  AQN      L     M++  ++P+  +  S+L A     
Sbjct: 120 RVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASA 179

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
               G Q  +++T KY         ++++D+  R G  D A  +  Q+    + + W+++
Sbjct: 180 SSGIGEQ-IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNAL 237

Query: 552 I 552
           I
Sbjct: 238 I 238


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/745 (34%), Positives = 399/745 (53%), Gaps = 76/745 (10%)

Query: 80  LSGCSEPDTAN--ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL---DLARRVFKEM 134
           LS C    TA+  +  Q HA I++    S   +  SL+  Y     L    L+  +   +
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P     SF++LI  FA+       +  F  +  L   P  F   +A+ +   L  +  G+
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA--- 251
           Q+HAF   + F+ +  VA++L  +Y K D +++ARKLF  MP+ D V ++ MI  Y+   
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184

Query: 252 -----------------------WNEQ---------YKESLKLFRELQFTRFDRSQFPFS 279
                                  WN           Y E++ +FR +    F       S
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH- 338
            +L  V    D+ +G Q+H   I     S+  V ++++DMY KCG  +E   +F  +   
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 339 ----------------------------------ISTVPWTAMISAYVQKGNLEEALNLF 364
                                             ++ V WT++I++  Q G   EAL LF
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    +  +  T  S++ A   +++L  GK++H F +R G   +V+ GSAL+DMYAK 
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++ A + F +M   N+VSWNA++   A +G A+ T++ F  M+QSG +PD V+   VL
Sbjct: 425 GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVL 484

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SAC+  GL EEG + +NSM++++ + PK EHYA +V +L R G  +EA  ++ +MPFEPD
Sbjct: 485 SACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPD 544

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W ++++SCR+H NL   + AA++LF +E   +   Y+ +SNIYA  G W+  +++++
Sbjct: 545 ACVWGALLSSCRVHNNLSLGEIAAEKLFFLEP-TNPGNYILLSNIYASKGLWDEENRIRE 603

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M+ +G+RK   YSW+E+  KVH+  A D+ HPQ  +I  K++ L  +MKK GY P T+ 
Sbjct: 604 VMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNF 663

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            L D +E+ K + L  HSE+LA+   L+NT  G P+ V+KNLR C DCHA IK+IS++ G
Sbjct: 664 VLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEG 723

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI VRD++RFHHFKDG CSC DFW
Sbjct: 724 REIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 233/524 (44%), Gaps = 78/524 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATAR---ELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +T  T  L+S Y  + +L+T +    L + +   T  S++ LI  +++ + F      F 
Sbjct: 34  DTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFS 93

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            +       PD     + +  C+     +   Q+HA     G+ +  I+ +SL   Y K 
Sbjct: 94  HLHPLR-LIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKC 152

Query: 122 -RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH------------- 167
            R LD AR++F  MP +D V ++A+I G+++ GL EEA +LF EM+              
Sbjct: 153 DRILD-ARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGM 211

Query: 168 ----------------------LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
                                  GF P   T +  L A   L D+ +G QVH +V+K   
Sbjct: 212 LAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGL 271

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVD---------GVSYNVMI--------- 247
             + FV +A+LD+Y K  CV E  ++F E+ E++         G+S N M+         
Sbjct: 272 GSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNK 331

Query: 248 --------TCYAW---------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
                       W         N +  E+L+LFR++Q    + +     +L+    N   
Sbjct: 332 FKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISA 391

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L  G++IH  ++      +V V ++L+DMYAKCGR + A+  F  +S ++ V W A++  
Sbjct: 392 LMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKG 451

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVIRSGFMS 409
           Y   G  +E + +F  M ++    D  TF  +L A A+      G + + S     G   
Sbjct: 452 YAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEP 511

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            +   + L+ + ++ G L++A    KEMP E +   W AL+S+C
Sbjct: 512 KMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSC 555



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 187/401 (46%), Gaps = 48/401 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP+++ V  + +I+GY + G +  A+ELF  M    V+   VSW  ++ G+     + EA
Sbjct: 165 MPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEA 224

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
             +F  M   G   PD  T + +L   GC E        QVH  +IK G  S   + +++
Sbjct: 225 VGMFRMMLVQGFW-PDGSTVSCVLPAVGCLEDVVVGA--QVHGYVIKQGLGSDKFVVSAM 281

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE------------------ 156
           +D Y K  C+    RVF E+ + +  S NA +TG ++ G+ +                  
Sbjct: 282 LDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNV 341

Query: 157 -----------------EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
                            EA++LF +MQ  G +P+  T  + + A   ++ +  G+++H F
Sbjct: 342 VTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCF 401

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
            ++    ++V+V +AL+D+Y+K   +  AR+ F +M  ++ VS+N ++  YA + + KE+
Sbjct: 402 SLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKET 461

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN--SLV 317
           +++F  +  +        F+ +LS  A     + G + +        I E K+ +   LV
Sbjct: 462 MEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGI-EPKMEHYACLV 520

Query: 318 DMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            + ++ G+ EEA  I   +        W A++S+     NL
Sbjct: 521 TLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNL 561


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 279/800 (34%), Positives = 429/800 (53%), Gaps = 62/800 (7%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N LI+ Y    +LA+A  LF +M  R AVSWT L+ G SQ     +A   F  MR
Sbjct: 55  STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 114

Query: 65  TDG---------------------------GSDPDY--------------------VTFA 77
             G                            S P                      V  A
Sbjct: 115 RAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLA 174

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLAR--RVFKEM 134
           +LL  C           +HA ++  G  +    + N L+  Y    C DLA   R+F  M
Sbjct: 175 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS--HCADLASALRLFAAM 232

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P++++VS+  L++G ++  ++ +A+  F  M+  G  P+ F  ++A  A   L      R
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
              A      F   +FVA+ L D+YSK   + EA ++F +MP+ D V++  MI  YA N 
Sbjct: 293 SCTA-SASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351

Query: 255 QYKESLKLFRELQFTRF-DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             + ++  FR+++        Q  F ++LS      D  + + IH          EV V 
Sbjct: 352 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 411

Query: 314 NSLVDMYAKCGRFEEAKEIFA-NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           N+L+DMYAK    E A  +   +    + V  T+MI  Y++   +EEAL +++E+ R  +
Sbjct: 412 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 471

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ TF+S+++  A  A L  G QLH+ VI++  + + F GS L+DMY K G +  ++Q
Sbjct: 472 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 531

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F E+  R  ++WNA+I+  AQ+G  +  +++F+ M+ SG +P+ ++ +S+L+ACSH GL
Sbjct: 532 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 591

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++EGL+YF SM + + + PK+EHY+ ++D   R+G  DEA K +++MP +P+   W S++
Sbjct: 592 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 651

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            +CR+  + E  + AA  L K+E   +   +V++S IYA  GQWE V  V+K MR+  ++
Sbjct: 652 GACRMRGSKELGEVAAQNLMKLEP-GNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 710

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS---CALHDE 669
           K+  +SWV+   K HVF + D  HPQ  +I  K+E L   +K+EGY PDTS   C L D 
Sbjct: 711 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDI 770

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
            +E     L+YHSER+A+AFALI+ P   PI+V KNLR C DCH A K I K+  R+I V
Sbjct: 771 AKE---RILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIV 827

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD+SRFHHF +G CSC D+W
Sbjct: 828 RDNSRFHHFVNGRCSCGDYW 847



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 248/553 (44%), Gaps = 59/553 (10%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLAR--RV 130
           V  A+LL  C           +HA ++  G  +    + N L+  Y    C DLA   R+
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS--HCADLASALRL 78

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF------------- 177
           F  MP++++VS+  L++G ++  ++ +A+  F  M+  G  P+   +             
Sbjct: 79  FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHT 138

Query: 178 -------------------------AAALSAGVGLA----------DIALGRQVHA-FVV 201
                                    A A +  V LA          D+  GR +HA  V+
Sbjct: 139 LAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVL 198

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
                 + F+AN L+ +YS    +  A +LF  MP  + VS+  +++  + N  + ++L 
Sbjct: 199 SGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALA 258

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
            F  ++      ++F  S+     A        R   T +      +E+ VA++L DMY+
Sbjct: 259 AFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNLADMYS 317

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFA 380
           KCG   EA  +F  +     V WTAMI  Y + G+LE A+  F +M R   + ADQ  F 
Sbjct: 318 KCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFC 377

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           S+L AS  L    L K +H  V ++GF   V   +AL+DMYAKS  ++ A +  K  P  
Sbjct: 378 SVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGG 437

Query: 441 -NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            N+VS  ++I    +    +  L  + ++ + G +P+  +  S++  C+   L+E+G Q 
Sbjct: 438 WNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQ- 496

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            ++   K  L       +++VD+  + G    + +L  ++ +  D I W++VIN    H 
Sbjct: 497 LHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHG 555

Query: 560 NLEFAKKAADQLF 572
           +   A +A D++ 
Sbjct: 556 HGREAIQAFDRMI 568



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 209/492 (42%), Gaps = 86/492 (17%)

Query: 188 ADIALGRQVHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            D+  GR +HA  V+      + F+AN L+ +YS    +  A +LF  MP  + VS+  +
Sbjct: 34  GDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 93

Query: 247 ITCYAWNEQYKESL--------------KLFRELQF------------------------ 268
           ++  + N  + ++L              +L  E +F                        
Sbjct: 94  VSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVK 153

Query: 269 ---TRFDRSQFP-------FSTLLSVVANKLDLQIGRQIHTQTIVT-TAISEVKVANSLV 317
               R  R   P        ++LL       DL+ GR +H + +++  A +   +AN L+
Sbjct: 154 YWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 213

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MY+ C     A  +FA +   + V WT ++S   Q     +AL  F  M RA ++  + 
Sbjct: 214 TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRF 273

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
             +S  RA+A L +    +   +     GF + +F  S L DMY+K G L +A + F +M
Sbjct: 274 ALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQM 332

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY-QPDSVSLLSVLSACS-------- 488
           P+++ V+W A+I   A+NG  +A + SF DM + G    D     SVLSA          
Sbjct: 333 PQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS 392

Query: 489 ---HCGLIEEGLQ------------YFNSM-----TQKYKLRPKKEHY---ASMVDILCR 525
              HC + + G +            Y  SM     ++  K+ P   +     SM+D    
Sbjct: 393 KSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIE 452

Query: 526 SGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           + C +EA  +  ++     EP+E  +SS+I  C +   LE   +   Q+ K + +RD+  
Sbjct: 453 TDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFV 512

Query: 583 YVAMSNIYAVAG 594
              + ++Y   G
Sbjct: 513 GSTLVDMYGKCG 524



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 150/369 (40%), Gaps = 58/369 (15%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVT-TAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++LL       DL+ GR +H + +++  A +   +AN L+ MY+ C     A  +FA +
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI------------------------ 372
              + V WT ++S   Q     +AL  F  M RA +                        
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 373 ------------------------SADQATFASILRASAELASLSLGKQLHSFVIRSG-F 407
                                   +A     AS+L++      L  G+ LH+ ++ SG  
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
            ++ F  + L+ MY+    L  A++ F  MP RN VSW  L+S  +QN      L +F  
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCR 525
           M ++G  P   +L S   A +             S T    +    E +  +++ D+  +
Sbjct: 263 MRRAGVAPTRFALSSAARAAA----ALGAPLRARSCTASASVGFDTELFVASNLADMYSK 318

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
            G   EA ++  QMP + D + W+++I+    + +LE A  +   + K E L  A  +V 
Sbjct: 319 CGLLSEACRVFDQMP-QKDAVAWTAMIDGYAKNGSLEAAVLSFRDM-KREGLVGADQHVF 376

Query: 586 MSNIYAVAG 594
            S + A  G
Sbjct: 377 CSVLSASGG 385



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLK 428
           A  +A     AS+L++      L  G+ LH+ ++ SG  + + F  + L+ MY+    L 
Sbjct: 14  APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            A++ F  MP RN VSW  L+S  +QN      L +F  M ++G  P
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP 120


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/798 (33%), Positives = 434/798 (54%), Gaps = 59/798 (7%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDR--TAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           ++TN LI  Y+ S + A A  L   +     +   W  LI         R+ F L+  M+
Sbjct: 193 LATN-LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMK 251

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + G + PD+ TF  +   C+   + +    +HA + + G+ S + +CN++V  Y K   L
Sbjct: 252 SLGWT-PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGAL 310

Query: 125 DLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAA 179
             A  +F ++  +   D VS+N++++ +        A+ LF +M  +HL   P   +   
Sbjct: 311 RHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL-MSPDVISLVN 369

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A   LA    GRQVH F +++  V++VFV NA++D+Y+K   + EA K+F  M   D
Sbjct: 370 ILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKD 429

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK------LDL-- 291
            VS+N M+T Y+   + + +L LF  +     +     ++ +++  A +      LD+  
Sbjct: 430 VVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFR 489

Query: 292 ----------------------QIGRQIHTQTIVTTAI-------------SEVKVANSL 316
                                  +G  +H +     AI              ++KV N L
Sbjct: 490 QMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGL 549

Query: 317 VDMYAKCGRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN--I 372
           +DMYAKC   E A+++F ++S      V WT MI  Y Q G+   AL LF  M + +  I
Sbjct: 550 IDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSI 609

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAI 431
             +  T +  L A A LA+L  G+Q+H++V+R+ + S  +F  + L+DMY+KSG +  A 
Sbjct: 610 KPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQ 669

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  MP+RN VSW +L++    +G  +  L+ F++M +    PD ++ L VL ACSH G
Sbjct: 670 IVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSG 729

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           +++ G+ +FN M++ + + P  EHYA MVD+  R+G   EA KL+ +MP EP  ++W ++
Sbjct: 730 MVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL 789

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H N+E  + AA++L ++E   D + Y  +SNIYA A +W+ V++++  M+  G+
Sbjct: 790 LSACRLHSNVELGEFAANRLLELESGNDGS-YTLLSNIYANARRWKDVARIRYTMKRTGI 848

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SW++ +  V  F   D  HPQ+ +I   + +L+Q +K  GY P TS ALHD D+
Sbjct: 849 KKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDD 908

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K + L  HSE+LA+A+ ++     +PI + KNLR C DCH+AI  ISKI   EI +RD
Sbjct: 909 EEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRD 968

Query: 732 SSRFHHFKDGFCSCRDFW 749
           SSRFHHFK+G CSC+ +W
Sbjct: 969 SSRFHHFKNGSCSCKGYW 986



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 224/501 (44%), Gaps = 85/501 (16%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ VS N ++S Y+ + +  TA  LF+ M  R  +S                        
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMS------------------------ 361

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD ++   +L  C+    +    QVH   I+ G    + + N++VD Y K   
Sbjct: 362 -------PDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGK 414

Query: 124 LDLARRVFKEMPQKDSVSFNAL-----------------------------------ITG 148
           ++ A +VF+ M  KD VS+NA+                                   ITG
Sbjct: 415 MEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITG 474

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF--- 205
           +A+ G   EA+ +F +M   G +P+  T  + LSA V +  +  G++ H + +K      
Sbjct: 475 YAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLD 534

Query: 206 -----VENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKE 258
                 +++ V N L+D+Y+K      ARK+F  +   + D V++ VMI  YA +     
Sbjct: 535 GPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANN 594

Query: 259 SLKLFRELQFTRFDRS----QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VA 313
           +L+LF  +   + D+S     F  S  L   A    L+ GRQ+H   +     S +  VA
Sbjct: 595 ALQLFSGM--FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVA 652

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N L+DMY+K G  + A+ +F N+   + V WT++++ Y   G  E+AL +F EM +  + 
Sbjct: 653 NCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLV 712

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            D  TF  +L A +    +  G    + + +  G        + ++D++ ++G L +A++
Sbjct: 713 PDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMK 772

Query: 433 TFKEMP-ERNIVSWNALISAC 452
              EMP E   V W AL+SAC
Sbjct: 773 LINEMPMEPTPVVWVALLSAC 793


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/640 (36%), Positives = 383/640 (59%), Gaps = 4/640 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-F 170
           NSL++ Y K      AR+VF  MP+++ VS+ A++ G+   G + E +KLF  M      
Sbjct: 73  NSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDES 132

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P++F       +      I  G+Q H   +K+  + + FV N L+ +YS      EA +
Sbjct: 133 RPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIR 192

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +  ++P  D   ++  ++ Y     +KE  ++ R +           + + L + +N  D
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRD 252

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L + RQIH++ +     SEV+ + ++++MY KCG+   A+ +F N    + V  T ++ A
Sbjct: 253 LNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDA 312

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y Q  + EEALNLF +M    +  ++ TFA  L + AEL+ L  G  LH  V++SG+ ++
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNH 372

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  G+AL++MYAKSGS++DA + F  M  R+IV+WN +I   + +G  +  L++F+ M+ 
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMI 432

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           +G  P+ ++ + VL ACSH G +E+GL YFN + +K+ ++P  +HY  +V +L ++G F 
Sbjct: 433 AGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFK 492

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD-QLFKMEKLRDAAPYVAMSNI 589
           +AE  M   P E D + W +++N+C + +N    KK A+  ++K     D+  YV +SNI
Sbjct: 493 DAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPN--DSGVYVLLSNI 550

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           +A + +WE V++V+  M +RGV+K    SW+ ++++ HVF A +  HP+   I  KI+ +
Sbjct: 551 HAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEV 610

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
           + +++  GY PD +   HD DEE + ++L YHSE+LA+A+ L+ TPE SP+ V KN+R C
Sbjct: 611 LSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRIC 670

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH+AIKLISKI+ R I +RDS+RFHHF+DG CSC D+W
Sbjct: 671 DDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 212/451 (47%), Gaps = 2/451 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++    N LI+ YVK G    AR++F+ M +R  VSW  ++ GY       E  KLF  M
Sbjct: 67  KDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                S P+      +   CS      E  Q H   +K G  S   + N+LV  Y     
Sbjct: 127 VFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSG 186

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              A RV  ++P  D   F++ ++G+ + G  +E  ++   M        + T+ + L  
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRL 246

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D+ L RQ+H+ +V+  F   V  + A++++Y K   V+ A+++F      + V  
Sbjct: 247 CSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLN 306

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             ++  Y  ++ ++E+L LF ++       +++ F+  L+ +A    L+ G  +H   + 
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLK 366

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +   + V V N+LV+MYAK G  E+A++ F+ ++    V W  MI  +   G   E L  
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEA 426

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M  A    ++ TF  +L+A + +  +  G    +  + +     ++   + ++ + +
Sbjct: 427 FDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLS 486

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           K+G  KDA    +  P E ++V+W AL++AC
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRALLNAC 517



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 193 GRQVHAFVVKTN---FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           G  +H  ++ TN     ++V+  N+L++LY K    V ARK+F  MPE + VS+  M+  
Sbjct: 50  GESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKG 109

Query: 250 YAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           Y  +    E LKLF+ + F+   R ++F  + +    ++   ++ G+Q H   + +  +S
Sbjct: 110 YQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMS 169

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              V N+LV MY+ C    EA  +  +L +     +++ +S Y++ G  +E   +   M 
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMA 229

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           + ++  D  T+ S LR  + L  L+L +Q+HS ++R GF S V +  A+++MY K G + 
Sbjct: 230 KEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVL 289

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A + F     +NIV    ++ A  Q+   +  L  F  M      P+  +    L++ +
Sbjct: 290 YAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIA 349

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
              L++ G    + +  K   R       ++V++  +SG  ++A K  + M F  D + W
Sbjct: 350 ELSLLKHG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTW 407

Query: 549 SSVI 552
           +++I
Sbjct: 408 NTMI 411



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 7/221 (3%)

Query: 276 FP---FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA---NSLVDMYAKCGRFEEA 329
           FP    + LL V AN   L+ G  IH   IVT   S  K     NSL+++Y KCG    A
Sbjct: 29  FPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRA 88

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL-RASAE 388
           +++F  +   + V W AM+  Y   G   E L LF  M  ++ S      A+++ ++ + 
Sbjct: 89  RKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSS 148

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
              +  GKQ H   ++SG MS+ F  + L+ MY+      +AI+   ++P  ++  +++ 
Sbjct: 149 SGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSA 208

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           +S   + G  +   +    M +     D+++ LS L  CS+
Sbjct: 209 LSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSN 249



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 37/251 (14%)

Query: 382 ILRASAELASLSLGKQLHSFVI---RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           +L+  A  + L  G+ +H  +I   +S    +V+  ++L+++Y K G    A + F  MP
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGL 497
           ERN+VSW A++     +G     LK F+ MV S   +P+      V  +CS  G IEEG 
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156

Query: 498 QYF---------------NSMTQKYKLRPKKEHYASMVDIL---------------CRSG 527
           Q+                N++   Y L         ++D L                  G
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216

Query: 528 CFDEAEKLMAQMPFEP---DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
            F E  +++ +M  E    D I + S +  C   ++L  A++   ++ ++    +     
Sbjct: 217 AFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASG 276

Query: 585 AMSNIYAVAGQ 595
           A+ N+Y   G+
Sbjct: 277 AIINMYGKCGK 287


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/777 (32%), Positives = 416/777 (53%), Gaps = 76/777 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y +   L  A ++F+ M +  A+ W   I    Q  + ++  +LF  M+       
Sbjct: 174 LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSF-LKA 232

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T   +L  C +    N   Q+H  + +FG +S + +CN L+  Y K   L+LARRVF
Sbjct: 233 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 292

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE--------------------------- 164
             M  +++ S+N++I+ +A  G   +A  LF E                           
Sbjct: 293 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 352

Query: 165 --------MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
                   MQ  GFKP+  +  + L A   L  + +G++ H +V++  F  +V+V  +L+
Sbjct: 353 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 412

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+Y K+  +  A+ +F  M   +  ++N +++ Y++   ++++L+L  +++         
Sbjct: 413 DMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQME--------- 463

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
                             ++     +VT         N ++  YA  G  +EA  +    
Sbjct: 464 ------------------KEGIKPDLVTW--------NGMISGYAMWGCGKEALAVLHQT 497

Query: 337 SHISTVP----WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
             +   P    WTA+IS   Q GN  ++L  F +M +  +  + A+   +LRA A L+ L
Sbjct: 498 KSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLL 557

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK++H   IR+GF+ +VF  +AL+DMY+KS SLK+A + F+ +  + + SWN +I   
Sbjct: 558 QKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGF 617

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A  G  +  +  F +M + G  PD+++  ++LSAC + GLI EG +YF+SM   Y++ P+
Sbjct: 618 AIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPR 677

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY  MVD+L R+G  DEA  L+  MP +PD  +W +++ SCRIHKNL+FA+ AA  LF
Sbjct: 678 LEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLF 737

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           K+E   ++A Y+ M N+Y++  +WE +  +++ M   GVR    +SW+++  +VHVF+++
Sbjct: 738 KLEP-NNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSD 796

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           ++ HP   +I  ++  L+ EMKK GY PD +C   + DE  K + L  H+E+LAI + LI
Sbjct: 797 EKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLI 856

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
               G PI V+KN R C+DCH+A K IS +  RE+ +RD  RFHHF++G CSC DFW
Sbjct: 857 KMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 267/588 (45%), Gaps = 56/588 (9%)

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF-AKEGLNEEAIKLFVEMQHLGFK 171
           +L+ SY        A  VF     ++ + +N+ +  F +  G     +++F E+   G  
Sbjct: 71  NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
                ++ AL     + DI LG ++H  ++K  F  +V++  AL++ Y +   + +A ++
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F EMP  + + +N  I     +E+ ++ ++LFR++QF+           +L        L
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 250

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
              +QIH         S+V + N L+ MY+K G+ E A+ +F ++ + +T  W +MIS+Y
Sbjct: 251 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 310

Query: 352 VQKGNLEEALNLFIEMCRANISADQATF-------------------------------- 379
              G L +A +LF E+  +++  D  T+                                
Sbjct: 311 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 370

Query: 380 ---ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
               S+L+A +EL  L++GK+ H +V+R+GF  +V+ G++L+DMY K+ SL  A   F  
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M  RNI +WN+L+S  +  G  +  L+    M + G +PD V+   ++S  +  G  +E 
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVIN 553
           L   +  T+   L P    + +++    ++G   ++ K  AQM  E   P+    + ++ 
Sbjct: 491 LAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLR 549

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +C     L+  K+      +   + D     A+ ++Y+ +    S+    K  R   ++ 
Sbjct: 550 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKS---SSLKNAHKVFRR--IQN 604

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            T  SW  +     +F            + ++  ++  EM+K G  PD
Sbjct: 605 KTLASWNCMIMGFAIFG-----------LGKEAISVFNEMQKVGVGPD 641



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 211/480 (43%), Gaps = 69/480 (14%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y K+G L  AR +F+SM +R   SW  +I  Y+      +A+ LF ++ +    
Sbjct: 273 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESS-DM 331

Query: 70  DPDYVTFATLLSG-----------------------------------CSEPDTANELIQ 94
            PD VT+  LLSG                                    SE    N   +
Sbjct: 332 KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 391

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
            H  +++ G++  + +  SL+D Y K   L  A+ VF  M  ++  ++N+L++G++ +G+
Sbjct: 392 THGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGM 451

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            E+A++L  +M+  G KP   T+   +S   G A    G++  A                
Sbjct: 452 FEDALRLLNQMEKEGIKPDLVTWNGMIS---GYAMWGCGKEALA---------------- 492

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
                     V+   K  G  P V  VS+  +I+  +     ++SLK F ++Q      +
Sbjct: 493 ----------VLHQTKSLGLTPNV--VSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPN 540

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
               + LL   A+   LQ G++IH  +I    I +V VA +L+DMY+K    + A ++F 
Sbjct: 541 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            + + +   W  MI  +   G  +EA+++F EM +  +  D  TF ++L A      +  
Sbjct: 601 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 660

Query: 395 G-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           G K   S +     +  +     ++D+  ++G L +A      MP + +   W AL+ +C
Sbjct: 661 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 720



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 112/276 (40%), Gaps = 41/276 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM---------------------------- 32
           M N+N  + N L+SGY   G    A  L N M                            
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 33  -----------VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
                      +    VSWT LI G SQ    R++ K F  M+ + G  P+  +   LL 
Sbjct: 491 LAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE-GVMPNSASITCLLR 549

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
            C+      +  ++H   I+ G+   + +  +L+D Y K   L  A +VF+ +  K   S
Sbjct: 550 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 609

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG-RQVHAFV 200
           +N +I GFA  GL +EAI +F EMQ +G  P   TF A LSA      I  G +   + +
Sbjct: 610 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 669

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
                V  +     ++DL  +   + EA  L   MP
Sbjct: 670 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP 705



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 145/371 (39%), Gaps = 51/371 (13%)

Query: 295 RQIHTQTI-VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           + +H Q I +    +    A +L+  Y   G F  A  +F      + + W + +  +  
Sbjct: 50  KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKS 109

Query: 354 K-GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G+L   L +F E+    +  D   ++  L+    +  + LG ++H  +I+ GF  +V+
Sbjct: 110 SAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVY 169

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
              AL++ Y +   L+ A Q F EMP    + WN  I    Q+   Q  ++ F  M  S 
Sbjct: 170 LRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSF 229

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            + ++ +++ VL AC   G +    Q  +    ++ L         ++ +  ++G  + A
Sbjct: 230 LKAETATIVRVLQACGKMGALNAAKQ-IHGYVFRFGLDSDVSLCNPLISMYSKNGKLELA 288

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            ++   M    +   W+S+I+S   +  L F   A    +++E   D  P +   N    
Sbjct: 289 RRVFDSME-NRNTSSWNSMISS---YAALGFLNDAWSLFYELES-SDMKPDIVTWN---- 339

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
                                                 +   LH    E+     N++Q 
Sbjct: 340 -----------------------------------CLLSGHFLHGYKEEVL----NILQR 360

Query: 653 MKKEGYKPDTS 663
           M+ EG+KP++S
Sbjct: 361 MQGEGFKPNSS 371


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/776 (34%), Positives = 425/776 (54%), Gaps = 40/776 (5%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L++ Y + G+L  A  LFN+M  R AV++  LI       ++  A     DM  +G 
Sbjct: 99  ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 158

Query: 69  SDPDYVTFATLLSGCSEPDTANELI---QVHADIIKFGY--NSILIICNSLVDSYCKIRC 123
               + T  ++L  CS    A +L    + HA  +K G+         N+L+  Y ++  
Sbjct: 159 PLSSF-TLVSVLLACSH--LAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGL 215

Query: 124 LDLARRVFKEMPQKDS-----VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           +D A+ +F  +   DS     V++N +++   + G   EAI++  +M   G +P   TFA
Sbjct: 216 VDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFA 275

Query: 179 AALSAGVGLADIALGRQVHAFVVK-TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +AL A   L  ++LGR++HA+V+K ++   N FVA+AL+D+Y+ H+ V  AR++F  +P 
Sbjct: 276 SALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPG 335

Query: 238 VD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQI 293
                G+ +N M+  YA     +E+L+LF  ++       S+   + +L   A       
Sbjct: 336 GHRQLGL-WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAG 394

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +         V N+L+D+YA+ G  E A+ IFA +     V W  +I+  V 
Sbjct: 395 KEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVV 454

Query: 354 KGNLEEALNLFIEMCRAN------------------ISADQATFASILRASAELASLSLG 395
           +G++ +A  L  EM +                    +  +  T  ++L   A LA+ + G
Sbjct: 455 QGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKG 514

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           K++H + +R    S++  GSAL+DMYAK G L  +   F  +P+RN+++WN LI A   +
Sbjct: 515 KEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMH 574

Query: 456 GDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           G     +  F+ MV S   +P+ V+ ++ L+ACSH G+++ G++ F+SM + + ++P  +
Sbjct: 575 GLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPD 634

Query: 515 HYASMVDILCRSGCFDEAEKLMAQM-PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
            +A  VDIL R+G  DEA  ++  M P E     WSS + +CR+H+N+   + AA++LF+
Sbjct: 635 LHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ 694

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
           +E   +A+ YV + NIY+ AG WE  S+V+  MR+RGV K    SW+EL   +H F A +
Sbjct: 695 LEP-DEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGE 753

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
             HP++  +   ++ L + M+ +GY PDTS  LHD +E  K   L+YHSE+LAIAF L+ 
Sbjct: 754 SAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLR 813

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           TP G+ I V KNLR C DCH A K IS++ GREI +RD  RFHHF DG CSC D+W
Sbjct: 814 TPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 228/479 (47%), Gaps = 32/479 (6%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           + N+L+ +Y +   L  A  +F  MP +D+V+FN+LI           A+    +M   G
Sbjct: 98  VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157

Query: 170 FKPSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVEN--VFVANALLDLYSKHDCVV 226
              S FT  + L A   LA D+ LGR+ HAF +K  F++    F  NALL +Y++   V 
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217

Query: 227 EARKLFGEMPEVDG-----VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
           +A+ LFG +   D      V++N M++    + +  E++++  ++           F++ 
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANL--SH 338
           L   +    L +GR++H   +  + ++    VA++LVDMYA   R   A+ +F  +   H
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQ 397
                W AM+  Y Q G  EEAL LF  M   A +   + T A +L A A   + +  + 
Sbjct: 338 RQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEA 397

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H +V++ G   N F  +AL+D+YA+ G ++ A   F  +  R++VSWN LI+ C   G 
Sbjct: 398 VHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGH 457

Query: 458 AQATLKSFEDMVQSG------------------YQPDSVSLLSVLSACSHCGLIEEGLQY 499
                +   +M Q G                    P++V+L+++L  C+      +G + 
Sbjct: 458 IHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKG-KE 516

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            +    ++ L       +++VD+  + GC   +  +  ++P + + I W+ +I +  +H
Sbjct: 517 IHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAYGMH 574



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 196/421 (46%), Gaps = 18/421 (4%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF--VANALLDLYSKHDCVVEARKLF 232
           F    A  +   L  +   R +H   ++ + +      VANALL  Y++   +  A  LF
Sbjct: 60  FALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALF 119

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF-STLLSVVANKLDL 291
             MP  D V++N +I       ++  +L   R++       S F   S LL+      DL
Sbjct: 120 NAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDL 179

Query: 292 QIGRQIHTQTIVTTAI--SEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-----VPW 344
           ++GR+ H   +    +   E    N+L+ MYA+ G  ++A+ +F ++    +     V W
Sbjct: 180 RLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTW 239

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             M+S  VQ G   EA+ +  +M    +  D  TFAS L A ++L  LSLG+++H++V++
Sbjct: 240 NTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK 299

Query: 405 -SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQAT 461
            S   +N F  SAL+DMYA    +  A + F  +P   R +  WNA++   AQ G  +  
Sbjct: 300 DSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEA 359

Query: 462 LKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
           L+ F  M  ++G  P   ++  VL AC+       G +  +    K  +        +++
Sbjct: 360 LELFARMEAEAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFVQNALM 418

Query: 521 DILCRSGCFDEAEKLMAQMPFEP-DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           D+  R G  + A  + A +  EP D + W+++I  C +  ++  A +   ++ +  +  D
Sbjct: 419 DLYARLGDMEAARWIFAAI--EPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTD 476

Query: 580 A 580
           A
Sbjct: 477 A 477



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 18/197 (9%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+  Y + G++  AR +F ++  R  VSW  LI G   +    +AF+L  +M+
Sbjct: 410 NPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQ 469

Query: 65  TDG------------GSD-----PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
             G            G+D     P+ VT  TLL GC+      +  ++H   ++   +S 
Sbjct: 470 QQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSD 529

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           + + ++LVD Y K  CL L+R VF  +P+++ +++N LI  +   GL +EAI LF  M  
Sbjct: 530 IAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVM 589

Query: 168 LG-FKPSDFTFAAALSA 183
               KP++ TF AAL+A
Sbjct: 590 SNEAKPNEVTFIAALAA 606


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/781 (34%), Positives = 419/781 (53%), Gaps = 47/781 (6%)

Query: 10  NMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L++ Y + G+L  A  LF +     R AVS+  LI       Q+  A     DM  +G
Sbjct: 104 NALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG 163

Query: 68  GSDPDYVTFATLLSGCSE--PDTANEL-IQVHADIIKFGY---NSILIICNSLVDSYCKI 121
             D    T  ++L  CS    D    L  + HA  +K G+          N+L+  Y ++
Sbjct: 164 RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARL 223

Query: 122 RCLDLARRVFKEMPQK------DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             +D A+ +F+           D V++N +I+   + G   EA+++  +M  LG +P   
Sbjct: 224 GLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGV 283

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVK-TNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           TFA+AL A   L  +ALGR++HA V+K  +   N FVA+AL+D+Y+ ++ V  AR++F  
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDM 343

Query: 235 MPEVD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLD 290
           +PE     G+ +N MI  YA     +E+L+LF  ++       S+   S +L   A    
Sbjct: 344 VPEPSRQLGM-WNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEG 402

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
                 +H   +         V N+L+DMYA+ G  + A+ IFA +     V W  +I+ 
Sbjct: 403 FAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITG 462

Query: 351 YVQKGNLEEALNLFIEM--------------------CRANISADQATFASILRASAELA 390
            V +G+  EA  L  EM                    C  N      T  ++L   A LA
Sbjct: 463 CVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPN----NITLMTLLPGCAALA 518

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           + + GK++H + +R    S++  GSAL+DMYAK G L  +   F  +P RN+++WN LI 
Sbjct: 519 APARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIM 578

Query: 451 ACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           A   +G     +  F++M   G   P+ V+ ++ L+ACSH GL++ GL+ F+ M + + +
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGV 638

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQM-PFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           +P  + +A +VD+L R+G  DEA  ++  M P E     WSS++ +CR+H+N+E  + AA
Sbjct: 639 KPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAA 698

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
           ++LF++E   +A+ YV + NIY+ AG W+    V+  MR +GV K    SW+EL   +H 
Sbjct: 699 ERLFELEP-GEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHR 757

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F A +  HP + E+   ++ L + M++EGY PDTSC LHD DE+ K   L+YHSE+LAIA
Sbjct: 758 FMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIA 817

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F L+  P G+ I V KNLR C DCH A K +SK+ GR+I +RD  RFHHF+DG CSC D+
Sbjct: 818 FGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDY 877

Query: 749 W 749
           W
Sbjct: 878 W 878



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 16/195 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+  Y + G +  AR +F  +  R  VSW  LI G   +    EAF+L  +M+
Sbjct: 421 NRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQ 480

Query: 65  -----------TDGGSD----PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILI 109
                      T+ G      P+ +T  TLL GC+         ++H   ++    S + 
Sbjct: 481 LPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIA 540

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           + ++LVD Y K  CL  +R VF  +P+++ +++N LI  +   GL +EA+ LF EM   G
Sbjct: 541 VGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGG 600

Query: 170 -FKPSDFTFAAALSA 183
              P++ TF AAL+A
Sbjct: 601 EATPNEVTFIAALAA 615



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 22/260 (8%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH--ISTVPWTAMISAYVQKGNLEEALNLFIEMC- 368
           V N+L+  YA+CG  + A  +FA  +      V + ++ISA       E AL+   +M  
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 369 --RANISADQATFASILRASAELA---SLSLGKQLHSFVIRSGFMS---NVFSGSALLDM 420
             R ++S+   T  S+L A + L       LG++ H+F ++ GF+      F  +ALL M
Sbjct: 162 EGRHDVSS--FTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSM 219

Query: 421 YAKSGSLKDAIQTFKEMPER------NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           YA+ G + DA   F+           ++V+WN +IS   Q G     ++   DMV  G +
Sbjct: 220 YARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVR 279

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD V+  S L ACS   ++  G +    + +   L       +++VD+   +     A +
Sbjct: 280 PDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARR 339

Query: 535 LMAQMPFEPDEI--MWSSVI 552
           +   +P EP     MW+++I
Sbjct: 340 VFDMVP-EPSRQLGMWNAMI 358


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/661 (35%), Positives = 389/661 (58%), Gaps = 4/661 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           +L Q+HA ++  G      +   L+ +      +  AR+VF ++P+     +NA+I G++
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           +    ++A+ ++  MQ     P  FTF   L A  GL+ + +GR VHA V +  F  +VF
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 211 VANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           V N L+ LY+K   +  AR +F    +PE   VS+  +++ YA N +  E+L++F  ++ 
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK 215

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                      ++L+      DL+ GR IH   +      E  +  SL  MYAKCG+   
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           AK +F  +   + + W AMIS Y + G   EA+++F EM   ++  D  +  S + A A+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           + SL   + ++ +V RS +  +VF  SAL+DM+AK GS++ A   F    +R++V W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I     +G A+  +  +  M + G  P+ V+ L +L AC+H G++ EG  +FN M   +K
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HK 454

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P+++HYA ++D+L R+G  D+A +++  MP +P   +W +++++C+ H+++E  + AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            QLF ++   +   YV +SN+YA A  W+ V++V+  M+E+G+ K    SWVE++ ++  
Sbjct: 515 QQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ HP+  EI R++E +   +K+ G+  +   +LHD ++E   E+L  HSER+AIA
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           + LI+TP+G+P+ + KNLRAC +CHAA KLISK+  REI VRD++RFHHFKDG CSC D+
Sbjct: 634 YGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693

Query: 749 W 749
           W
Sbjct: 694 W 694



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 217/447 (48%), Gaps = 4/447 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI      G++  AR++F+ +       W  +I GYS+ N F++A  ++ +M+    S P
Sbjct: 59  LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-P 117

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  LL  CS          VHA + + G+++ + + N L+  Y K R L  AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177

Query: 132 K--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +   +P++  VS+ A+++ +A+ G   EA+++F  M+ +  KP      + L+A   L D
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQD 237

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR +HA VVK        +  +L  +Y+K   V  A+ LF +M   + + +N MI+ 
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA N   +E++ +F E+            ++ +S  A    L+  R ++     +    +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V ++++L+DM+AKCG  E A+ +F        V W+AMI  Y   G   EA++L+  M R
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  TF  +L A      +  G    + +            + ++D+  ++G L  
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQ 477

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQN 455
           A +  K MP +  +  W AL+SAC ++
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 176/355 (49%), Gaps = 10/355 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K   L +AR +F  +   +RT VSWT ++  Y+Q  +  EA ++F  MR   
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK-M 216

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN---SILIICNSLVDSYCKIRCL 124
              PD+V   ++L+  +      +   +HA ++K G      +LI  N++   Y K   +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQV 273

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F +M   + + +NA+I+G+AK G   EAI +F EM +   +P   +  +A+SA 
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +   R ++ +V ++++ ++VF+++AL+D+++K   V  AR +F    + D V ++
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  + + +E++ L+R ++      +   F  LL    +   ++ G          
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADH 453

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
               + +    ++D+  + G  ++A E+   +        W A++SA  +  ++E
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 8/148 (5%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ LI  + K G++  AR +F+  +DR  V W+ +I GY    + REA  L+  M   GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GG 419

Query: 69  SDPDYVTFATLLSGCSEPDTANE---LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             P+ VTF  LL  C+      E      + AD  K         C  ++D   +   LD
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYAC--VIDLLGRAGHLD 476

Query: 126 LARRVFKEMPQKDSVS-FNALITGFAKE 152
            A  V K MP +  V+ + AL++   K 
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH 504


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/813 (32%), Positives = 428/813 (52%), Gaps = 113/813 (13%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N  + N ++  +  SG +  A  LF+ M  + R +VSWT +I GY Q      + K F+ 
Sbjct: 69  NIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMS 128

Query: 63  MRTDGGSD---PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           M  D   D    D  ++   +  C    +    +Q+HA +IK    +   I NSLVD Y 
Sbjct: 129 MLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYI 188

Query: 120 KIRCLDLAR-------------------------------RVFKEMPQKDSVSFNALITG 148
           K   + LA                                 VF  MP++D VS+N LI+ 
Sbjct: 189 KCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISV 248

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           F++ G     +  FVEM +LGFKP+  T+ + LSA   ++D+  G  +HA +++     +
Sbjct: 249 FSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLD 308

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
            F+ + L+D+Y+K  C+  AR++F  + E + VS+  +I+  A      ++L LF +++ 
Sbjct: 309 AFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQ 368

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                 +F  +T+L V + +     G  +H   I +   S V V N+++ MYA+CG  E+
Sbjct: 369 ASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEK 428

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNL------------------------------- 357
           A   F ++    T+ WTAMI+A+ Q G++                               
Sbjct: 429 ASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFS 488

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           EE + L++ M    +  D  TFA+ +RA A+LA++ LG Q+ S V + G  S+V   +++
Sbjct: 489 EEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSI 548

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + MY++ G +K+A + F  +  +N++SWNA+++A AQNG     ++++EDM+++  +PD 
Sbjct: 549 VTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDH 608

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +S ++VLS                                   D+L R+G  D+A+ L+ 
Sbjct: 609 ISYVAVLS-----------------------------------DLLGRAGLLDQAKNLID 633

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            MPF+P+  +W +++ +CRIH +   A+ AA +L ++  + D+  YV ++NIYA +G+ E
Sbjct: 634 GMPFKPNATVWGALLGACRIHHDSILAETAAKKLMEL-NVEDSGGYVLLANIYAESGELE 692

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
           +V+ ++K M+ +G+RK    SW+E+ ++VHVFT ++  HPQ NE+  K+E +M++++  G
Sbjct: 693 NVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTG 752

Query: 658 -YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
            Y    SCA           S KYHSE+LA AF L++ P   PI V KNLR C DCH  I
Sbjct: 753 RYVSIVSCAH---------RSQKYHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVI 803

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KL+S +T RE+ +RD  RFHHFKDGFCSCRD+W
Sbjct: 804 KLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 8/255 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++T+S   +I+ + ++G++  AR+ F+ M +R  ++W  ++  Y Q     E  KL+
Sbjct: 436 MPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLY 495

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V MR+     PD+VTFAT +  C++  T     QV + + KFG +S + + NS+V  Y +
Sbjct: 496 VLMRSK-AVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSR 554

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR+VF  +  K+ +S+NA++  FA+ GL  +AI+ + +M     KP   ++ A 
Sbjct: 555 CGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAV 614

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS-KHDCVV---EARKLFGEMP 236
           LS  +G A   L  Q    +    F  N  V  ALL      HD ++    A+KL  E+ 
Sbjct: 615 LSDLLGRA--GLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLM-ELN 671

Query: 237 EVDGVSYNVMITCYA 251
             D   Y ++   YA
Sbjct: 672 VEDSGGYVLLANIYA 686



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 70/330 (21%)

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           I R++H Q I++   + + + N+L+ MY+ CG  ++A  +F   +H +   W  M+ A+ 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 353 QKGNLEEALNLFIEM-----------------CRANISADQ-ATFASILR---------- 384
             G + EA NLF EM                 C+  + A    TF S+LR          
Sbjct: 82  DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141

Query: 385 ---------ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK------- 428
                    A   LAS     QLH+ VI+    +     ++L+DMY K G++        
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201

Query: 429 ------------------------DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
                                   +A+  F  MPER+ VSWN LIS  +Q G     L +
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLST 261

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M   G++P+ ++  SVLSAC+    ++ G  + ++   + +        + ++D+  
Sbjct: 262 FVEMCNLGFKPNFMTYGSVLSACASISDLKWG-AHLHARILRMEHSLDAFLGSGLIDMYA 320

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           + GC   A ++   +  E +++ W+ +I+ 
Sbjct: 321 KCGCLALARRVFNSLG-EQNQVSWTCLISG 349



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 138/321 (42%), Gaps = 67/321 (20%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN VS   LISG  + G    A  LFN M   + V                         
Sbjct: 338 QNQVSWTCLISGVAQFGLRDDALALFNQMRQASVV------------------------- 372

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                   D  T AT+L  CS  + A     +H   IK G +S + + N+++  Y   RC
Sbjct: 373 -------LDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYA--RC 423

Query: 124 ---------------------------------LDLARRVFKEMPQKDSVSFNALITGFA 150
                                            +D AR+ F  MP+++ +++N++++ + 
Sbjct: 424 GDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYI 483

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G +EE +KL+V M+    KP   TFA ++ A   LA I LG QV + V K     +V 
Sbjct: 484 QHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVS 543

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           VAN+++ +YS+   + EARK+F  +   + +S+N M+  +A N    ++++ + ++  T 
Sbjct: 544 VANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTE 603

Query: 271 FDRSQFPFSTLLSVVANKLDL 291
                  +  +LS +  +  L
Sbjct: 604 CKPDHISYVAVLSDLLGRAGL 624


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/769 (35%), Positives = 428/769 (55%), Gaps = 34/769 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G L  A ++F+ + +R  VSW  +I    +  ++  A K F  M  +G  
Sbjct: 51  NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG-F 109

Query: 70  DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P   T  ++   CS     + L    Q+H    + G+       N+L+  Y K+  LD 
Sbjct: 110 EPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDD 168

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+ +      +D V++N++I+ F++     EA+     M   G KP   TFA+ L A   
Sbjct: 169 AKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSH 228

Query: 187 LADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           L  +  G+++HA+ ++T+  +EN FV +AL+D+Y     V   R +F  + +     +N 
Sbjct: 229 LDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNA 288

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQ--IHTQTI 302
           MI  YA +E  +++L LF E++      S    +T+ S+V   +  + I R+  IH   I
Sbjct: 289 MIAGYAQSEHDEKALMLFIEMEAAAGLYSNA--TTMSSIVPAYVRCEGISRKEGIHGYVI 346

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                +   + N+L+DMY++ G  + +K IF ++     V W  +I++YV  G   +AL 
Sbjct: 347 KRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALL 406

Query: 363 LFIEMCRAN----------------ISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           L  EM R                     +  T  ++L   A L++L+ GK++H++ IR+ 
Sbjct: 407 LLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL 466

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
             S V  GSAL+DMYAK G L  A + F +MP RN+++WN +I A   +G  + +L+ FE
Sbjct: 467 LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFE 526

Query: 467 DMVQSG-----YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           DMV  G      +P  V+ +++ ++CSH G+++EGL  F+ M  ++ + P  +HYA +VD
Sbjct: 527 DMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVD 586

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           ++ R+G  +EA  L+  MP   D++  WSS++ +CRI+ N+E  + AA+ L +++    A
Sbjct: 587 LVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQP-DVA 645

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           + YV +SNIY+ AG W+    +++ M+  GV+K    SW+E   +VH F A D  HPQ+ 
Sbjct: 646 SHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSE 705

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           ++   +E L + +KKEGY PDT+C LHD DEE K   L  HSE+LAIAF ++NTP G+ I
Sbjct: 706 KLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTI 765

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V KNLR C DCH A K ISKI  REI +RD+ RFHHFKDG CSC D+W
Sbjct: 766 RVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 262/514 (50%), Gaps = 26/514 (5%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI--LIICNSLVDSYCKIRCLD 125
           G  PD   F  +L   +         Q+HA + KFGY S   + I N+LV+ Y K   L 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A +VF  + ++D VS+N++I+   +    E AIK F  M   GF+PS FT  +   A  
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124

Query: 186 GLA---DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            L     + LG+Q+H    +       F  NAL+ +Y+K   + +A+ L     + D V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ ++ NE++ E+L   R +           F+++L   ++   L+ G++IH   +
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243

Query: 303 VTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            T  + E   V ++LVDMY  CG+ E  + +F ++       W AMI+ Y Q  + E+AL
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKAL 303

Query: 362 NLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            LFIEM   A + ++  T +SI+ A      +S  + +H +VI+ G  +N +  +AL+DM
Sbjct: 304 MLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDM 363

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISA---CAQNGDAQATLK-------------S 464
           Y++ G +K + + F  M +R+IVSWN +I++   C ++ DA   L               
Sbjct: 364 YSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGD 423

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           + D  Q  ++P+S++L++VL  C+    + +G +  ++   +  L  +    +++VD+  
Sbjct: 424 YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGSALVDMYA 482

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           + GC + A ++  QMP   + I W+ +I +  +H
Sbjct: 483 KCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 247/511 (48%), Gaps = 39/511 (7%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T S N L++ Y K G L  A+ L     DR  V+W  +I  +SQ  +F EA  +F+ +  
Sbjct: 150 TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEAL-MFLRLMV 208

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHA------DIIKFGYNSILIICNSLVDSYC 119
             G  PD VTFA++L  CS  D      ++HA      D+I+  +     + ++LVD YC
Sbjct: 209 LEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSF-----VGSALVDMYC 263

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFA 178
               ++  R VF  +  +    +NA+I G+A+   +E+A+ LF+EM+   G   +  T +
Sbjct: 264 NCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMS 323

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + + A V    I+    +H +V+K     N ++ NAL+D+YS+   +  ++++F  M + 
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTR---------FDRSQFPFS----TLLSVV 285
           D VS+N +IT Y    +  ++L L  E+Q             D  Q PF     TL++V+
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443

Query: 286 ---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A+   L  G++IH   I     S+V V ++LVDMYAKCG    A+ +F  +   + +
Sbjct: 444 PGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVI 503

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCR-----ANISADQATFASILRASAELASLSLGKQ 397
            W  +I AY   G  +E+L LF +M         +   + TF ++  + +    +  G  
Sbjct: 504 TWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLS 563

Query: 398 L-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQ 454
           L H      G        + ++D+  ++G +++A      MP     + +W++L+ AC  
Sbjct: 564 LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRI 623

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
             + +    + E+++Q   QPD  S   +LS
Sbjct: 624 YHNIEIGEIAAENLLQ--LQPDVASHYVLLS 652



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 145/279 (51%), Gaps = 16/279 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+   + L+  Y   G + + R +F+S++DR    W  +I GY+Q     +A  LF++M
Sbjct: 250 ENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEM 309

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G   +  T ++++      +  +    +H  +IK G  +   + N+L+D Y ++  
Sbjct: 310 EAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGD 369

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--------------- 168
           +  ++R+F  M  +D VS+N +IT +   G + +A+ L  EMQ +               
Sbjct: 370 IKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQ 429

Query: 169 -GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
             FKP+  T    L     L+ +A G+++HA+ ++      V V +AL+D+Y+K  C+  
Sbjct: 430 VPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNL 489

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           AR++F +MP  + +++NV+I  Y  + + KESL+LF ++
Sbjct: 490 ARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDM 528



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 10/194 (5%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF--MSNVFSGSALLDMYAKS 424
           M  +  S D   F ++L+A A +  L LGKQ+H+ V + G+   S+V   + L++MY K 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L DA + F  + ER+ VSWN++ISA  +  + +  +K+F  M+  G++P S +L+S+ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 485 SACSHC----GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            ACS+     GL   G Q      +K   R    +  +++ +  + G  D+A+ L+    
Sbjct: 121 LACSNLRKRDGLW-LGKQIHGCCFRKGHWRTFSNN--ALMAMYAKLGRLDDAKSLLVLFE 177

Query: 541 FEPDEIMWSSVINS 554
            + D + W+S+I+S
Sbjct: 178 -DRDLVTWNSMISS 190


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/743 (34%), Positives = 413/743 (55%), Gaps = 4/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF--VDMRTDG 67
           N LI+ Y K G + +A ++F +M +R  VSW  ++   S+   F E   +F  + +  + 
Sbjct: 234 NALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEE 293

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  PD  T  T++  C+        + VH    K G    + + NSLVD Y K   L  A
Sbjct: 294 GLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVG 186
           R +F     K+ VS+N +I G++KEG      +L  EMQ     + ++ T    L A  G
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSG 413

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              +   +++H +  +  F+++  VANA +  Y+K   +  A ++F  M      S+N +
Sbjct: 414 EHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNAL 473

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +A N    +SL LF  +  +  D  +F   +LL   A    L+ G++IH   +    
Sbjct: 474 IGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGL 533

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +  +  SL+ +Y +C      K IF  + + S V W  MI+ + Q     EAL+ F +
Sbjct: 534 ELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQ 593

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    I   +     +L A +++++L LGK++HSF +++    + F   AL+DMYAK G 
Sbjct: 594 MLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGC 653

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ +   F  + E++   WN +I+    +G     ++ FE M   G +PDS + L VL A
Sbjct: 654 MEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIA 713

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+H GL+ EGL+Y   M   Y ++PK EHYA +VD+L R+G   EA KL+ +MP EPD  
Sbjct: 714 CNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSG 773

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WSS+++SCR + +LE  ++ + +L ++E    A  YV +SN+YA  G+W+ V +V++ M
Sbjct: 774 IWSSLLSSCRNYGDLEIGEEVSKKLLELEP-NKAENYVLLSNLYAGLGKWDEVRKVRQRM 832

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           +E G+ K    SW+E+   V+ F  +D    ++ +I++    L +++ K GYKPDTSC L
Sbjct: 833 KENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVL 892

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+ +EE K++ LK HSE+LAI+F L+NT +G+ + V KNLR C DCH AIKL+SK+  R+
Sbjct: 893 HELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRD 952

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD+ RFHHFK+G C+C DFW
Sbjct: 953 IIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 286/585 (48%), Gaps = 14/585 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + V +  +I+ Y   G+ + +R +F++  ++    +  L+ GYS+   FR+A  LF+++
Sbjct: 126 NDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            +     PD  T   +   C+          VHA  +K G  S   + N+L+  Y K   
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGF 245

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM---QHLGFKPSDFTFAAA 180
           ++ A +VF+ M  ++ VS+N+++   ++ G   E   +F  +   +  G  P   T    
Sbjct: 246 VESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTV 305

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + A   + ++ +G  VH    K    E V V N+L+D+YSK   + EAR LF      + 
Sbjct: 306 IPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQI 297
           VS+N +I  Y+    ++   +L +E+Q  R ++ +    T+L+V+   + +  L   ++I
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQ--REEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H        + +  VAN+ V  YAKC   + A+ +F  +   +   W A+I A+ Q G  
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            ++L+LF+ M  + +  D+ T  S+L A A L  L  GK++H F++R+G   + F G +L
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           + +Y +  S+      F +M  +++V WN +I+  +QN      L +F  M+  G +P  
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQE 603

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +++  VL ACS    +  G +  +S   K  L        +++D+  + GC ++++ +  
Sbjct: 604 IAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFD 662

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           ++  E DE +W+ +I    IH +       A +LF++ + +   P
Sbjct: 663 RVN-EKDEAVWNVIIAGYGIHGH----GLKAIELFELMQNKGGRP 702



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 239/522 (45%), Gaps = 40/522 (7%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGV 185
           +R VF    +KD   +NAL++G+++  L  +AI LF+E+       P +FT      A  
Sbjct: 147 SRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACA 206

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           G+AD+ LG  VHA  +K     + FV NAL+ +Y K   V  A K+F  M   + VS+N 
Sbjct: 207 GVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNS 266

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTI 302
           ++   + N  + E   +F+ L  +  +      +T+++V+   A   ++++G  +H    
Sbjct: 267 VMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAF 326

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 EV V NSLVDMY+KCG   EA+ +F      + V W  +I  Y ++G+      
Sbjct: 327 KLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFE 386

Query: 363 LFIEMCR-ANISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L  EM R   +  ++ T  ++L A S E   LSL K++H +  R GF+ +    +A +  
Sbjct: 387 LLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSL-KEIHGYAFRHGFLKDELVANAFVAA 445

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK  SL  A + F  M  + + SWNALI A AQNG    +L  F  M+ SG  PD  ++
Sbjct: 446 YAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTI 505

Query: 481 LSVLSACS-----HCG------LIEEGLQY--------------FNSMTQKYKLRPKKEH 515
            S+L AC+      CG      ++  GL+                +SM     +  K E+
Sbjct: 506 GSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMEN 565

Query: 516 -----YASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKA 567
                +  M+    ++    EA     QM     +P EI  + V+ +C     L   K+ 
Sbjct: 566 KSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEV 625

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
                K     DA    A+ ++YA  G  E    +   + E+
Sbjct: 626 HSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEK 667



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 152/286 (53%), Gaps = 7/286 (2%)

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAK 330
           D S+     LL    +  ++ +GR++H     +  + ++V ++  ++ MY+ CG   +++
Sbjct: 89  DISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSR 148

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA-NISADQATFASILRASAEL 389
            +F          + A++S Y +     +A++LF+E+  A +++ D  T   + +A A +
Sbjct: 149 GVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGV 208

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           A + LG+ +H+  +++G  S+ F G+AL+ MY K G ++ A++ F+ M  RN+VSWN+++
Sbjct: 209 ADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVM 268

Query: 450 SACAQNGDAQATLKSFEDMV---QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
            AC++NG        F+ ++   + G  PD  ++++V+ AC+  G +  G+   + +  K
Sbjct: 269 YACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHGLAFK 327

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             +  +     S+VD+  + G   EA  L   M    + + W+++I
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTII 372



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 8/192 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++   T  LI  Y K G +  ++ +F+ + ++    W ++I GY       +A +LF  
Sbjct: 635 SEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFEL 694

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+  GG  PD  TF  +L  C+      E ++    +   +G    L     +VD   + 
Sbjct: 695 MQNKGGR-PDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRA 753

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEG---LNEEAIKLFVEMQHLGFKPSDFTF 177
             L  A ++  EMP + DS  +++L++     G   + EE  K  +E++    K  ++  
Sbjct: 754 GQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEP--NKAENYVL 811

Query: 178 AAALSAGVGLAD 189
            + L AG+G  D
Sbjct: 812 LSNLYAGLGKWD 823


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/671 (37%), Positives = 400/671 (59%), Gaps = 6/671 (0%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            N N    + LI+ Y K   +  A+++F+++ +R  V W  ++GGY+Q     +  KLF +
Sbjct: 381  NSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSE 440

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR   G  PD  T+ ++LS C+  +      Q+H+ IIK  +   L + N+LVD Y K  
Sbjct: 441  MR-GCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCG 499

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             L+ AR+ F+ +  +D+VS+NA+I G+ +E   +EA  +F  M   G  P + + A+ LS
Sbjct: 500  ALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILS 559

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                L  +  G QVH F+VK+     ++  ++L+D+Y K   +  AR +F  MP    VS
Sbjct: 560  GCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVS 619

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             N +I  YA N+   E++ LF+E+Q    + S+  F++LL        L +GRQIH    
Sbjct: 620  MNAIIAGYAQND-LVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQ 678

Query: 303  VTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEA 360
                + +   +  SL+ MY    R  +A  +F+   +  ST+ WTA+IS + Q G  EEA
Sbjct: 679  KRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEA 738

Query: 361  LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            L L+ EM R N   DQATFAS+LRA + LASL  G+ +HS +   G  S+  +GSA++DM
Sbjct: 739  LQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDM 798

Query: 421  YAKSGSLKDAIQTFKEMPERN-IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            YAK G +K ++Q F+EM  +N ++SWN++I   A+NG A+  LK F++M  +  +PD V+
Sbjct: 799  YAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVT 858

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             L VL+ACSH G + EG + F+ M   YK+ P+ +H A M+D+L R G   EAE+ + ++
Sbjct: 859  FLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKL 918

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             FEP+ ++W++++ +CRIH +    ++AA++L ++E   +++PYV +SNIYA +G W+ V
Sbjct: 919  NFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEP-ENSSPYVLLSNIYAASGNWDEV 977

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            + V++AMRE+G+RK+   SW+ +  K ++F A D+ HP   EI   +++L+  MK++GY 
Sbjct: 978  NSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYI 1037

Query: 660  PDTSCALHDED 670
             +T   L DED
Sbjct: 1038 AETDSLLEDED 1048



 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 197/637 (30%), Positives = 321/637 (50%), Gaps = 72/637 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+     LI  Y K G+L  AR++F+++VD   VSWT +I GY Q     EA K+F DM+
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   PD V F T+++ C                +  G                    L
Sbjct: 276 KLGLV-PDQVAFVTVITAC----------------VGLGR-------------------L 299

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A  +F +MP  + V++N +I+G  K G + EAI  F  M   G K +  T  + LSA 
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAI 359

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  +  G  VHA  +K     NV+V ++L+++Y+K + +  A+K+F  + E + V +N
Sbjct: 360 ASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWN 419

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+  YA N    + +KLF E++   F   +F ++++LS  A    L++GRQ+H+  I  
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKH 479

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V N+LVDMYAKCG  EEA++ F  + +   V W A+I  YVQ+ + +EA N+F
Sbjct: 480 NFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMF 539

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    I+ D+ + ASIL   A L +L  G+Q+H F+++SG  + +++GS+L+DMY K 
Sbjct: 540 RRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKC 599

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+++ A   F  MP R++VS NA+I+  AQN D    +  F++M   G  P  ++  S+L
Sbjct: 600 GAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLL 658

Query: 485 SACS-----------HC-----GLIEEG--------LQYFNS--------MTQKYKLRPK 512
            AC+           HC     GL+ +G        + Y NS        +  +++    
Sbjct: 659 DACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKS 718

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
              + +++    ++GC +EA +L  +M      PD+  ++SV+ +C I  +L   +    
Sbjct: 719 TILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHS 778

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            +F +    D     A+ ++YA  G  +S  QV + M
Sbjct: 779 LIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEM 815



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 266/529 (50%), Gaps = 37/529 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++  Y K GN+  A + FN +  R  ++W  ++  YS++    +    F  ++  G S P
Sbjct: 122 IVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVS-P 180

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T+A +LS C+     +   QVH  +IK G+        SL+D Y K   L  AR++F
Sbjct: 181 NQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIF 240

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +   D+VS+ A+I G+ + GL EEA+K+F +MQ LG  P    F   ++A VG     
Sbjct: 241 DAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVG----- 295

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR                     LD         +A  LF +MP  + V++NVMI+ + 
Sbjct: 296 LGR---------------------LD---------DACDLFVQMPNTNVVAWNVMISGHV 325

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                 E++  F+ +  T    ++    ++LS +A+   L  G  +H Q I     S V 
Sbjct: 326 KRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVY 385

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V +SL++MYAKC + E AK++F  L   + V W AM+  Y Q G   + + LF EM    
Sbjct: 386 VGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCG 445

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D+ T+ SIL A A L  L +G+QLHSF+I+  F  N+F  + L+DMYAK G+L++A 
Sbjct: 446 FWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEAR 505

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F+ +  R+ VSWNA+I    Q  D       F  M+  G  PD VSL S+LS C++  
Sbjct: 506 QQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQ 565

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            +E+G Q  +    K  L+      +S++D+  + G  + A  + + MP
Sbjct: 566 ALEQGEQ-VHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 247/460 (53%), Gaps = 41/460 (8%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA  +KFG+ S   + +++VD Y K   ++ A + F ++ ++D +++N++++ ++++G 
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            E+ I  F  +Q+ G  P+ FT+A  LS+   L DI LG+QVH  V+K  F  N F   +
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L+D+YSK   +V+ARK+F  + + D VS+  MI  Y      +E+LK+F ++Q       
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ------- 275

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
                        KL L +  Q+   T++T  +                GR ++A ++F 
Sbjct: 276 -------------KLGL-VPDQVAFVTVITACVG--------------LGRLDDACDLFV 307

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            + + + V W  MIS +V++G   EA++ F  M +  + + ++T  S+L A A L +L+ 
Sbjct: 308 QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY 367

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  +H+  I+ G  SNV+ GS+L++MYAK   ++ A + F  + ERN+V WNA++   AQ
Sbjct: 368 GLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ 427

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG A   +K F +M   G+ PD  +  S+LSAC+    +E G Q  +S   K+       
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQ-LHSFIIKHNFEYNLF 486

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPF--EPDEIMWSSVI 552
              ++VD+  + G  +EA +   Q  F    D + W+++I
Sbjct: 487 VENTLVDMYAKCGALEEARQ---QFEFIRNRDNVSWNAII 523



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 24/370 (6%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           + IH QT+     S+ ++ +++VD+YAKCG  E A + F  L     + W +++S Y ++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+LE+ +  F  +    +S +Q T+A +L + A L  + LGKQ+H  VI+ GF  N F  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            +L+DMY+K GSL DA + F  + + + VSW A+I+   Q G  +  LK FEDM + G  
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE- 533
           PD V+ ++V++AC   G +++    F  M     +      +  M+    + GC  EA  
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDIEAID 335

Query: 534 --KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
             K M +   +       SV+++    + L +      Q  K     +     ++ N+YA
Sbjct: 336 FFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYA 395

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
              + E+  +V  A+ ER +                ++ A    + Q N    K+  L  
Sbjct: 396 KCEKMEAAKKVFDALDERNLV---------------LWNAMLGGYAQ-NGYASKVMKLFS 439

Query: 652 EMKKEGYKPD 661
           EM+  G+ PD
Sbjct: 440 EMRGCGFWPD 449



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 198/449 (44%), Gaps = 68/449 (15%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           + +HA  +K  F     + +A++DLY+K   V  A K F ++ + D +++N +++ Y+  
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              ++ +  F  LQ      +QF ++ +LS  A  +D+ +G+Q+H   I           
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            SL+DMY+KCG   +A++IF  +    TV WTAMI+ YVQ G  EEAL +F +M +  + 
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            DQ  F +++ A   L                                   G L DA   
Sbjct: 281 PDQVAFVTVITACVGL-----------------------------------GRLDDACDL 305

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS----- 488
           F +MP  N+V+WN +IS   + G     +  F++M ++G +    +L SVLSA +     
Sbjct: 306 FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365

Query: 489 ------HCGLIEEGLQ----YFNSMTQKYKLRPKKEHYASMVDIL--------------- 523
                 H   I++GL       +S+   Y    K E    + D L               
Sbjct: 366 NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGY 425

Query: 524 CRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
            ++G   +  KL ++M    F PDE  ++S++++C   + LE  ++    + K     + 
Sbjct: 426 AQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNL 485

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRER 609
                + ++YA  G  E   Q  + +R R
Sbjct: 486 FVENTLVDMYAKCGALEEARQQFEFIRNR 514


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/537 (42%), Positives = 346/537 (64%), Gaps = 3/537 (0%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFV-ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           L  +  GR VHA +V ++F++N  V  N ++++Y+K  C+ +AR++F EMP  D V++  
Sbjct: 100 LGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTA 159

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I  ++ N + +++L LF ++       + F  S+LL    ++  L  G Q+H   +   
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S V V ++LVDMYA+CG  + A+  F  +   S V W A+IS + +KG  E AL+L  
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M R N      T++S+  A A + +L  GK +H+ +I+SG     F G+ LLDMYAK+G
Sbjct: 280 KMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S+ DA + F  + + ++VSWN +++ CAQ+G  + TL  FE M++ G +P+ +S L VL+
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EGL YF  M +KYK+ P   HY + VD+L R G  D AE+ + +MP EP  
Sbjct: 400 ACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTA 458

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++ +CR+HKN+E    AA++ F+++   D+ P + +SNIYA AG+W  V++V+K 
Sbjct: 459 AVWGALLGACRMHKNMELGVYAAERAFELDP-HDSGPRMLLSNIYASAGRWRDVAKVRKM 517

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M+E GV+K  A SWVE+++ VH+F ANDE HPQ  EIR K E +  ++K+ GY PDTS  
Sbjct: 518 MKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHV 577

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           L   D++ + E L+YHSE+LA+AFAL+NTP GSPI + KN+R C DCHAAIK +SKI
Sbjct: 578 LLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 203/394 (51%), Gaps = 2/394 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYC 119
           +D+   G   PDY  ++ LL  C+      +   VHA ++   + ++ L++ N +V+ Y 
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K  CLD ARR+F EMP KD V++ ALI GF++     +A+ LF +M  LG +P+ FT ++
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSS 194

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A      +  G Q+HAF +K  +  +V+V +AL+D+Y++   +  A+  F  MP   
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I+ +A   + + +L L  ++Q   F  + F +S++ S  A+   L+ G+ +H 
Sbjct: 255 EVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHA 314

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I +       + N+L+DMYAK G  ++AK +F  L     V W  M++   Q G  +E
Sbjct: 315 HMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE 374

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            L+ F +M R  I  ++ +F  +L A +    L  G      + +     +V      +D
Sbjct: 375 TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVD 434

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  + G L  A +  +EMP E     W AL+ AC
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 184/357 (51%), Gaps = 2/357 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N++++ Y K G L  AR +F+ M  +  V+WT LI G+SQ N+ R+A  LF  
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P++ T ++LL         +   Q+HA  +K+GY S + + ++LVD Y +  
Sbjct: 180 M-LRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCG 238

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D A+  F  MP K  VS+NALI+G A++G  E A+ L  +MQ   F+P+ FT+++  S
Sbjct: 239 HMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFS 298

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +  +  G+ VHA ++K+      F+ N LLD+Y+K   + +A+++F  + + D VS
Sbjct: 299 ACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVS 358

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+T  A +   KE+L  F ++     + ++  F  +L+  ++   L  G        
Sbjct: 359 WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK 418

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
                 +V    + VD+  + G  + A+     +    T   W A++ A     N+E
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/726 (34%), Positives = 387/726 (53%), Gaps = 71/726 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q HA I+K G  +   +   L+  Y    C   A  V   +P+ +  SF+ LI  F+K  
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               A+  F +M   G  P +    +A+ A  GL+ +   RQVH     + F  + FV +
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------------------- 251
           +L+ +Y K + + +A ++F  M E D VS++ ++  YA                      
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 252 ----WNEQ---------YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
               WN           Y E++ +F ++    F+      S++L  V +  DL +G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-------------------- 338
              I    +S+  V+++L+DMY KC    E  ++F  + H                    
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333

Query: 339 ---------------ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
                          ++ V WT+MI+   Q G   EAL LF EM  A +  +  T   +L
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A   +A+L  GK  H F +R G  ++V+ GSAL+DMYAK G ++ +   F  +P +N+V
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WNA+I+  A +G A+  ++ F+ M +SG +PD +S   VLSACS  GL EEG  YFNSM
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           + KY +  + EHYA MV +L R+G  ++A  ++ +MP  PD  +W ++++SCR+H N+  
Sbjct: 514 SSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSL 573

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            + AA++LF++E   +   Y+ +SNIYA  G W  V++V+  M+ +G+RK    SW+E+K
Sbjct: 574 GEVAAEKLFELEP-SNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVK 632

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
           +KVH+  A D+ HPQ  +I  K++ L  EMKK GY P+ +  L D +E+ K + L  HSE
Sbjct: 633 NKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSE 692

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+ F L+NTP G P+ V+KNLR C DCH  IK IS    REI VRD++RFHHFK+G C
Sbjct: 693 KLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGAC 752

Query: 744 SCRDFW 749
           SC D+W
Sbjct: 753 SCGDYW 758



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 227/513 (44%), Gaps = 73/513 (14%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y  +   A A  + + + +    S++ LI  +S+ +QF  A   F  M T G   P
Sbjct: 54  LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLM-P 112

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS----------ILIICN--------- 112
           D     + +  C+         QVH      G++S          + I CN         
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172

Query: 113 ------------SLVDSYCKIRCLDLARRVFKEMP----QKDSVSFNALITGFAKEGLNE 156
                       +LV +Y +  C+D A+R+F EM     Q + +S+N +I GF   GL  
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
           EA+ +F++M   GF+P   T ++ L A   L D+ +G  +H +V+K   V +  V++AL+
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292

Query: 217 DLYSKHDCVVEARKLFGEMP-----------------------------------EVDGV 241
           D+Y K  C  E  ++F +M                                    E++ V
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+  MI C + N +  E+L+LFRE+Q      +      LL    N   L  G+  H  +
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           +     ++V V ++L+DMYAKCGR + ++  F  +   + V W A+I+ Y   G  +EA+
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAM 472

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDM 420
            +F  M R+    D  +F  +L A ++      G    +S   + G  + V   + ++ +
Sbjct: 473 EIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTL 532

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            +++G L+ A    + MP   +   W AL+S+C
Sbjct: 533 LSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 45/385 (11%)

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L+ +A+ L   +QH  F   + T A+          ++  RQ HA ++KT    +  +A 
Sbjct: 3   LSAQALALLDSVQHTIFNCLNSTTAS----------LSQTRQAHAHILKTGLFNDTHLAT 52

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            LL  Y+ + C  +A  +   +PE +  S++ +I  ++   Q+  +L  F ++       
Sbjct: 53  KLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
                 + +   A    L+  RQ+H    V+   S+  V +SLV MY KC +  +A  +F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS-------------------- 373
             +     V W+A+++AY ++G ++EA  LF EM  + +                     
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232

Query: 374 ---------------ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
                           D  T +S+L A  +L  L +G  +H +VI+ G +S+    SAL+
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMY K     +  Q F +M   ++ S NA I   ++NG  +++L+ F  +   G + + V
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSM 503
           S  S+++ CS  G   E L+ F  M
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREM 377


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/778 (35%), Positives = 428/778 (55%), Gaps = 41/778 (5%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +N L++ Y + G+L  A  LF +     R AVS+  LI       ++  A     DM  D
Sbjct: 88  SNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLAD 147

Query: 67  GGSDPDYVTFATLLSGCSE-PDTANEL-IQVHADIIKFGY---NSILIICNSLVDSYCKI 121
              +    T  ++L  CS   D  + L  + HA  +K G+          N+L+  Y ++
Sbjct: 148 --HEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARL 205

Query: 122 RCLDLARRVF--KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
             +D A+R+F        D V++N +I+   + G  EEA+++  +M  LG +P   TFA+
Sbjct: 206 GLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFAS 265

Query: 180 ALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           AL A   L  + +GR+VHAFV+K +    N FVA+AL+D+Y+ ++ V  AR++F  +PE 
Sbjct: 266 ALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEH 325

Query: 239 D---GVSYNVMITCYAWNEQY-KESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQI 293
               G+ +N MI  YA +    +E+++LF  ++       S+   + +L   A       
Sbjct: 326 GRQLGM-WNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTG 384

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +     S   V N+L+DMYA+ GR +EA  IFA +     V W  +I+  + 
Sbjct: 385 KEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIV 444

Query: 354 KGNLEEALNLFIEMCRANISA--------------------DQATFASILRASAELASLS 393
           +G + EA  L  EM   + +A                    +  T  ++L   A LA+ +
Sbjct: 445 QGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPA 504

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            GK++H + +R    S++  GSAL+DMYAK G L  A   F  +P RN+++WN LI A  
Sbjct: 505 RGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYG 564

Query: 454 QNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            +G     L  F+ MV +G   P+ V+ ++ L+ACSH GL++ GL+ F  M + Y   P 
Sbjct: 565 MHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPT 624

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQM-PFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
              +A +VD+L R+G  DEA  +++ M P E     WS+++ +CR+H+N++  + AA++L
Sbjct: 625 PYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERL 684

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           F++E   +A+ YV + NIY+ AG WE+ ++V+  MR+RGV K    SW+EL   +H F A
Sbjct: 685 FELEP-DEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMA 743

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            +  HP++ ++   ++ L + M++EGY PDTSC LHD DE  K   L+YHSE+LAIAF L
Sbjct: 744 GESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGL 803

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  P G+ I V KNLR C DCH A K IS++ GREI +RD  RFHHF+DG CSC D+W
Sbjct: 804 LRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 24/211 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           N    N L+  Y + G +  A  +F +M+D R  VSW  LI G   +    EAF+L  +M
Sbjct: 400 NRFVQNALMDMYARLGRMDEAHTIF-AMIDLRDIVSWNTLITGCIVQGLISEAFQLVREM 458

Query: 64  RTDG----------GSD---------PDYVTFATLLSGCSEPDTANELIQVHADIIKFGY 104
           +             G D         P+ +T  TLL GC+         ++H   ++   
Sbjct: 459 QLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHAL 518

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
            S L + ++LVD Y K  CL LAR VF  +P+++ +++N LI  +   GL +EA+ LF  
Sbjct: 519 ESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDR 578

Query: 165 MQHLG-FKPSDFTFAAALSA--GVGLADIAL 192
           M   G   P++ TF AAL+A    GL D  L
Sbjct: 579 MVANGEATPNEVTFIAALAACSHSGLVDRGL 609



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 15/320 (4%)

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEI 332
            F     +   A   D +  R IH  ++    +      V+N+L+  YA+CG  + A  +
Sbjct: 48  HFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALAL 107

Query: 333 FANLSH--ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           FA         V + ++ISA         AL+   +M  A+      T  S+L A + LA
Sbjct: 108 FAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHLA 166

Query: 391 SLS--LGKQLHSFVIRSGFMSN---VFSGSALLDMYAKSGSLKDAIQTF--KEMPERNIV 443
                LG++ H+F ++ GF+      F  +ALL MYA+ G + DA + F        ++V
Sbjct: 167 DQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLV 226

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           +WN +IS   Q G  +  ++   DMV  G +PD V+  S L ACS   L+  G +    +
Sbjct: 227 TWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFV 286

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLE 562
            +   L       +++VD+   +     A ++   +P    ++ MW+++I     H  ++
Sbjct: 287 LKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMD 346

Query: 563 FAKKAADQLFKMEKLRDAAP 582
             ++A +   +ME     AP
Sbjct: 347 --EEAIELFSRMEAEAGCAP 364


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/750 (36%), Positives = 402/750 (53%), Gaps = 74/750 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+   ++GN+  AR  F +M  RT  S+  L+ GY +      A  LF  M +    
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 70  DPDYVTFATLLSGCSE-----PDTANEL--IQVHADIIKFGYNSILIICNSLVDSYCKIR 122
             D  ++  L+SG S      PD A  L  I     ++ F          SL+  Y +  
Sbjct: 78  --DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSF---------TSLLRGYVRHG 126

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A R+F++MP+++ VS+  L+ G    G   EA +LF EM                 
Sbjct: 127 LLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD--------------- 171

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                                    +V    A+L  Y +   + EAR LF EMP+ + VS
Sbjct: 172 ------------------------RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVS 207

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ YA N +   + KLF  +     +R++  ++ +L        +Q G  +     
Sbjct: 208 WTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGY-----IQAG-HVEDAAE 257

Query: 303 VTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +  A+ E  VA  N+++  + + G  + AK +F  +       W+AMI AY Q   L EA
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+ F EM    +  +  +  SIL   A LA L  G+++H+ ++R  F  +VF+ SAL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G+L  A + F     ++IV WN++I+  AQ+G  +  L  F DM  +G  PD ++ 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +  L+ACS+ G ++EG + FNSMT    +RP  EHY+ MVD+L RSG  +EA  L+  MP
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD ++W +++ +CR+H+N E A+ AA +L ++E   +A PYV +S+IY   G+WE  S
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEP-GNAGPYVLLSHIYTSVGRWEDAS 556

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYK 659
           +++K +  R + K    SW+E   +VH+FT+ D L HP+   I R +E L   + + GY 
Sbjct: 557 KMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYS 616

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
            D S  LHD DEE K  SL+YHSER A+A+ L+  PEG PI VMKNLR C DCH+AIKLI
Sbjct: 617 ADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLI 676

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KIT REI +RD++RFHHFKDGFCSCRD+W
Sbjct: 677 AKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 217/458 (47%), Gaps = 52/458 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + VS   L+ GYV+ G LA A  LF  M +R  VS+T+L+GG     +  EA +LF +M 
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                D D V +  +LSG  +     E   +  ++ K      ++   +++  Y +   +
Sbjct: 170 ----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN----VVSWTAMISGYAQNGEV 221

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           +LAR++F+ MP+++ VS+ A++ G+ + G  E+A +LF  M                   
Sbjct: 222 NLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----------------- 264

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                                   V   NA++  + +   V  A+ +F +M E D  +++
Sbjct: 265 ----------------------HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y  NE   E+L  FRE+ + R  R  +P   ++L+V A    L  GR++H   + 
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            +   +V   ++L+ MY KCG  ++AK +F        V W +MI+ Y Q G  E+AL +
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
           F +M  A +S D  T+   L A +    +  G+++ +S  + S         S ++D+  
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLG 481

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +SG +++A    K MP E + V W AL+ AC  + +A+
Sbjct: 482 RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 183/362 (50%), Gaps = 11/362 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ V+   ++SGY ++G +  AR LF+ M  R  VSWT +I GY+Q  +   A KLF
Sbjct: 169 MPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF 228

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +       ++  A++        +  CN+++  + +
Sbjct: 229 EVM-----PERNEVSWTAMLVGYIQAGH----VEDAAELFNAMPEHPVAACNAMMVGFGQ 279

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A+ VF++M ++D  +++A+I  + +     EA+  F EM   G +P+  +  + 
Sbjct: 280 RGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+    LA +  GR+VHA +++ +F  +VF  +AL+ +Y K   + +A+++F      D 
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +N MIT YA +   +++L +F +++          +   L+  +    ++ GR+I   
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             V ++I    +  + +VD+  + G  EEA ++  N+      V W A++ A     N E
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519

Query: 359 EA 360
            A
Sbjct: 520 IA 521


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/557 (40%), Positives = 361/557 (64%), Gaps = 2/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VH  ++++ F  ++ + N LL++Y+K   + EARK+F +MPE D V++  +I+ Y+ 
Sbjct: 70  GRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQ 129

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           +++  ++L LF ++    F  ++F  S+++   A +     G Q+H   +     S V V
Sbjct: 130 HDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 189

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L+D+Y + G  ++A+ +F  L   + V W A+I+ + ++   E+AL LF  M R   
Sbjct: 190 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGF 249

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
                ++AS+  A +    L  GK +H+++I+SG     F+G+ LLDMYAKSGS+ DA +
Sbjct: 250 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 309

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  + +R++VSWN+L++A AQ+G     +  FE+M + G +P+ +S LSVL+ACSH GL
Sbjct: 310 IFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGL 369

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++EG  Y+  M +K  +  +  HY ++VD+L R+G  + A + + +MP EP   +W +++
Sbjct: 370 LDEGWHYYELM-KKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 428

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           N+CR+HKN E    AA+ +F+++   D  P+V + NIYA  G+W   ++V+K M+E GV+
Sbjct: 429 NACRMHKNTELGAYAAEHVFELDP-DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 487

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K  A SWVE+++ +H+F ANDE HPQ  EI RK E ++ ++K+ GY PDTS  +   D++
Sbjct: 488 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 547

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            +  +L+YHSE++A+AFAL+NTP GS I + KN+R C DCH+AIKL SK  GREI VRD+
Sbjct: 548 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDT 607

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFKDG CSC+D+W
Sbjct: 608 NRFHHFKDGACSCKDYW 624



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 207/389 (53%), Gaps = 1/389 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   + TLL  C+      +   VH  +I+  +   L++ N+L++ Y K   L+ AR+VF
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MP++D V++  LI+G+++     +A+ LF +M   GF P++FT ++ + A        
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G Q+H F VK  F  NV V +ALLDLY+++  + +A+ +F  +   + VS+N +I  +A
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                +++L+LF+ +    F  S F +++L    ++   L+ G+ +H   I +       
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
             N+L+DMYAK G   +A++IF  L+    V W ++++AY Q G   EA+  F EM R  
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGG 349

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  ++ +F S+L A +    L  G   +  + + G +   +    ++D+  ++G L  A+
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRAL 409

Query: 432 QTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +  +EMP E     W AL++AC  + + +
Sbjct: 410 RFIEEMPIEPTAAIWKALLNACRMHKNTE 438



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 10/285 (3%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           ++TLL        L  GR +H   I +    ++ + N+L++MYAKCG  EEA+++F  + 
Sbjct: 54  YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V WT +IS Y Q     +AL LF +M R   S ++ T +S+++A+A       G Q
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           LH F ++ GF SNV  GSALLD+Y + G + DA   F  +  RN VSWNALI+  A+   
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F+ M++ G++P   S  S+  ACS  G +E+G          Y ++  ++  A
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQG-----KWVHAYMIKSGEKLVA 288

Query: 518 ----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
               +++D+  +SG   +A K+  ++  + D + W+S++ +   H
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 332



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 182/356 (51%), Gaps = 2/356 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + V  N L++ Y K G+L  AR++F+ M +R  V+WT LI GYSQ ++  +A  LF  M
Sbjct: 84  HDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQM 143

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G S P+  T ++++   +         Q+H   +K G++S + + ++L+D Y +   
Sbjct: 144 LRFGFS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 202

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A+ VF  +  ++ VS+NALI G A+    E+A++LF  M   GF+PS F++A+   A
Sbjct: 203 MDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGA 262

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+ VHA+++K+      F  N LLD+Y+K   + +ARK+F  + + D VS+
Sbjct: 263 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 322

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++T YA +    E++  F E++      ++  F ++L+  ++   L  G   +     
Sbjct: 323 NSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 382

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
              + E     ++VD+  + G    A      +    T   W A+++A     N E
Sbjct: 383 DGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 438



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 17/244 (6%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D+  + ++L+       L+ G+ +H  +I+S F  ++   + LL+MYAK GSL++A 
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH-- 489
           + F +MPER+ V+W  LIS  +Q+      L  F  M++ G+ P+  +L SV+ A +   
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166

Query: 490 ---CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
              CG         +    K          ++++D+  R G  D+A+ +   +    D +
Sbjct: 167 RGCCG------HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-V 219

Query: 547 MWSSVI----NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI-YAVAGQWESVSQ 601
            W+++I      C   K LE  +    + F+      A+ + A S+  +   G+W     
Sbjct: 220 SWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 279

Query: 602 VKKA 605
           +K  
Sbjct: 280 IKSG 283


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/639 (38%), Positives = 377/639 (58%), Gaps = 39/639 (6%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N+L+ +Y K+  ++    VF +MP +DSVS+N LI  FA  G + +A+K+ V MQ  GF+
Sbjct: 93  NTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQ 152

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ ++   AL A   L D+  G+Q+H  +V  +  EN FV NA+ D+Y+K   + +AR L
Sbjct: 153 PTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLL 212

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  M + + VS+N+MI+ Y       E + LF E+Q +                  K DL
Sbjct: 213 FDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGL----------------KPDL 256

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
                             V V+N L + Y +CGR ++A+ +F  L     + WT MI  Y
Sbjct: 257 ------------------VTVSNVL-NAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGY 297

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  E+A  LF +M R N+  D  T +S++ + A+LASL  G+ +H  V+  G  +++
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SAL+DMY K G   DA   F+ MP RN+++WNA+I   AQNG     L  +E M Q 
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQE 417

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
            ++PD+++ + VLSAC +  +++EG +YF+S+++ + + P  +HYA M+ +L RSG  D+
Sbjct: 418 NFKPDNITFVGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDK 476

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+  MP EP+  +WS++++ C    +L+ A+ AA  LF+++  R+A PY+ +SN+YA
Sbjct: 477 AVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDP-RNAGPYIMLSNLYA 534

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+ V+ V+  M+E+  +K  AYSWVE+ +KVH F + D  HP+  +I  ++  L+ 
Sbjct: 535 ACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLIS 594

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACT 710
            +++ GY PDT+  LH+  EE K  S+ YHSE+LA+AFALI  P G +PI ++KN+R C 
Sbjct: 595 ILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCD 654

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K  S    R I +RDS+RFHHF  G CSC D W
Sbjct: 655 DCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 207/463 (44%), Gaps = 37/463 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N L+S Y K G +     +F+ M  R +VS+  LI  ++      +A K+ 
Sbjct: 84  MTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVL 143

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M+ DG   P   +    L  CS+        Q+H  I+         + N++ D Y K
Sbjct: 144 VRMQEDG-FQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAK 202

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D AR +F  M  K+ VS+N +I+G+ K G   E I LF EMQ  G KP   T +  
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNV 262

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A                                   Y +   V +AR LF ++P+ D 
Sbjct: 263 LNA-----------------------------------YFRCGRVDDARNLFIKLPKKDE 287

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           + +  MI  YA N + +++  LF ++         +  S+++S  A    L  G+ +H +
Sbjct: 288 ICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGK 347

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +V    + + V+++LVDMY KCG   +A+ IF  +   + + W AMI  Y Q G + EA
Sbjct: 348 VVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEA 407

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L L+  M + N   D  TF  +L A      +  G++    +   G    +   + ++ +
Sbjct: 408 LTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITL 467

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
             +SGS+  A+   + MP E N   W+ L+S CA+     A L
Sbjct: 468 LGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAEL 510



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 165/374 (44%), Gaps = 68/374 (18%)

Query: 210 FVANALLDLYSKHDCVVEARK-------------------------------LFGEMPEV 238
           F+ N LL LY+K   + +A+                                +F +MP  
Sbjct: 59  FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VSYN +I C+A N    ++LK+   +Q   F  +Q+     L   +  LDL+ G+QIH
Sbjct: 119 DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIH 178

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            + +V        V N++ DMYAKCG  ++A+ +F  +   + V W  MIS YV+ GN  
Sbjct: 179 GRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPN 238

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           E ++LF EM  + +  D  T +++L A                                 
Sbjct: 239 ECIHLFNEMQLSGLKPDLVTVSNVLNA--------------------------------- 265

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
             Y + G + DA   F ++P+++ + W  +I   AQNG  +     F DM++   +PDS 
Sbjct: 266 --YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSY 323

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           ++ S++S+C+    +  G Q  +       +       +++VD+ C+ G   +A  +   
Sbjct: 324 TISSMVSSCAKLASLYHG-QVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFET 382

Query: 539 MPFEPDEIMWSSVI 552
           MP   + I W+++I
Sbjct: 383 MPIR-NVITWNAMI 395



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 33/174 (18%)

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ----------------- 454
           F  + LL +YAK G L DA   F  M +R++ SWN L+SA A+                 
Sbjct: 59  FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118

Query: 455 --------------NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
                         NG +   LK    M + G+QP   S ++ L ACS    +  G Q  
Sbjct: 119 DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIH 178

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +     L        +M D+  + G  D+A  L   M  + + + W+ +I+ 
Sbjct: 179 GRIVVA-DLGENTFVRNAMTDMYAKCGDIDKARLLFDGM-IDKNVVSWNLMISG 230


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/597 (38%), Positives = 370/597 (61%), Gaps = 4/597 (0%)

Query: 155 NEEAIKLF--VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           + EA++LF  +E++H G+     T+ A +SA VGL  I   ++V  +++ + F  +++V 
Sbjct: 97  HREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVM 156

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N +L ++ K   +++ARKLF EMPE D  S+  M+        + E+ +LF  +     D
Sbjct: 157 NRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFND 216

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
                F+T++   A    +Q+G+QIH+  +      +  V+ +L+DMY+KCG  E+A  +
Sbjct: 217 GRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCV 276

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   +TV W ++I++Y   G  EEAL+L+ EM  +  + D  T + ++R  A LASL
Sbjct: 277 FDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASL 336

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
              KQ H+ ++R GF +++ + +AL+D Y+K G ++DA   F  M  +N++SWNALI+  
Sbjct: 337 EHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGY 396

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             +G  Q  ++ FE M+Q G  P  V+ L+VLSACS+ GL + G + F SM + +K++P+
Sbjct: 397 GNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPR 456

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             HYA M+++L R    DEA  L+   PF+P   MW++++ +CR+HKNLE  K AA++L+
Sbjct: 457 AMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLY 516

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            ME       Y+ + N+Y  +G+ +  + + + ++++G+R + A SWVE+K + + F   
Sbjct: 517 GMEP-EKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCG 575

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D+ H QT EI +K++NLM E+ K GY  +    L D DEE +   LKYHSE+LAIAF LI
Sbjct: 576 DKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEE-EQRILKYHSEKLAIAFGLI 634

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NTP  +P+ + +  R C DCH+AIKLI+ +TGREI VRD+SRFHHF++G CSC D+W
Sbjct: 635 NTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/530 (24%), Positives = 249/530 (46%), Gaps = 37/530 (6%)

Query: 51  NQFREAFKLF--VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           N+ REA +LF  +++  DG       T+  L+S C    +   + +V   +I  G+   L
Sbjct: 95  NRHREAMELFEILELEHDG-YGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDL 153

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            + N ++  + K   +  AR++F EMP+KD  S+  ++ G    G   EA +LF+ M   
Sbjct: 154 YVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKE 213

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
                  TFA  + A  GL  + +G+Q+H+  +K    ++ FV+ AL+D+YSK   + +A
Sbjct: 214 FNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDA 273

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
             +F +MPE   V +N +I  YA +   +E+L L+ E++ +      F  S ++ + A  
Sbjct: 274 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARL 333

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L+  +Q H   +     +++    +LVD Y+K GR E+A+ +F  + H + + W A+I
Sbjct: 334 ASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGF 407
           + Y   G  +EA+ +F +M +  ++    TF ++L A +       G ++ +S       
Sbjct: 394 AGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKV 453

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFE 466
                  + ++++  +   L +A    +  P +   + W AL++AC  + + +    + E
Sbjct: 454 KPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAE 513

Query: 467 DMVQSGYQPDSV-SLLSVLSACSHCGLIEEGLQYFNSMTQK-YKLRP-------KKEHYA 517
            +   G +P+ + + + +L+  +  G ++E      ++ +K  ++ P       KK+ YA
Sbjct: 514 KLY--GMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYA 571

Query: 518 --------------------SMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
                                MV+I C+ G  +E E L+  +  E   I+
Sbjct: 572 FLCGDKSHSQTKEIYQKVDNLMVEI-CKHGYAEENETLLPDVDEEEQRIL 620



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 1/288 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR+LF+ M ++   SW  ++GG      F EAF+LF+ M  +  +
Sbjct: 157 NRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEF-N 215

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D    TFAT++   +         Q+H+  +K G      +  +L+D Y K   ++ A  
Sbjct: 216 DGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHC 275

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +MP+K +V +N++I  +A  G +EEA+ L+ EM+  G     FT +  +     LA 
Sbjct: 276 VFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLAS 335

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +Q HA +V+  F  ++    AL+D YSK   + +AR +F  M   + +S+N +I  
Sbjct: 336 LEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAG 395

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           Y  + Q +E++++F ++       +   F  +LS  +     Q G +I
Sbjct: 396 YGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEI 443



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 133/334 (39%), Gaps = 77/334 (23%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K G +  AR +FN M  +  +SW  LI GY    Q +EA ++F  M 
Sbjct: 354 DIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQML 413

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G + P +VTF  +LS CS    +    ++   +                         
Sbjct: 414 QEGVT-PTHVTFLAVLSACSYSGLSQRGWEIFYSM------------------------- 447

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
              +R  K  P+  ++ +  +I    +E L +EA  L   ++   FKP+   +AA L+A 
Sbjct: 448 ---KRDHKVKPR--AMHYACMIELLGRESLLDEAYAL---IRTAPFKPTANMWAALLTAC 499

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++ LG+                               + A KL+G  PE    +Y 
Sbjct: 500 RMHKNLELGK-------------------------------LAAEKLYGMEPE-KLCNYI 527

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           V++  Y  + + KE+  + + L+  +      P  + + V         G + H+QT   
Sbjct: 528 VLLNLYNSSGKLKEAAGILQTLK--KKGLRMLPACSWVEVKKQPYAFLCGDKSHSQT--- 582

Query: 305 TAISEV--KVANSLVDMYAKCGRFEEAKEIFANL 336
               E+  KV N +V++  K G  EE + +  ++
Sbjct: 583 ---KEIYQKVDNLMVEI-CKHGYAEENETLLPDV 612


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/624 (38%), Positives = 365/624 (58%), Gaps = 35/624 (5%)

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           L R+VF EM  ++ V +N +I  +      ++ + +F EM + GF+P ++T+   L A  
Sbjct: 71  LTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACS 130

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              ++  G  +H  V+K     N+FV N L+ +Y K  C+ EAR++F EM   D VS+N 
Sbjct: 131 CSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNS 190

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  YA N ++ ++L++ RE++    D  Q P                     T   +  
Sbjct: 191 MVAGYAHNMRFDDALEICREME----DYGQKPDGC------------------TMASLMP 228

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           A++     N L             ++IF NL   + + W  MI  Y++     +A++L++
Sbjct: 229 AVANTSSENVLY-----------VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYL 277

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +  +  D  TFAS+L A  +L++L LG+++H +V +     N+   ++L+DMYA+ G
Sbjct: 278 QMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCG 337

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            L DA + F  M  R++ SW +LISA    G     +  F +M+ SG  PDS++ +++LS
Sbjct: 338 CLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILS 397

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EG  YF  MT  Y++ P+ EHYA +VD+L R+G  DEA  ++ QMP EP+E
Sbjct: 398 ACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNE 457

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W+++++SCR+  N++    AAD L ++     +  YV +SNIYA AG+W+ V++++  
Sbjct: 458 RVWATLLSSCRVFTNMDIGILAADNLLQLAP-EQSGYYVLLSNIYAKAGRWKEVTEIRSV 516

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M+ + +RK    S VEL ++VH F A D  HPQ+ EI  ++  L+ +MK+ GY P+T  A
Sbjct: 517 MKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSA 576

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD +EE K   L  HSE+LAI FAL+NT E   I + KNLR C DCH A KLISKI  R
Sbjct: 577 LHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVER 635

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD++RFHHFKDG CSC D+W
Sbjct: 636 EIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 221/478 (46%), Gaps = 41/478 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +QN      L+  Y   G     R++F+ M DR  V + ++I  Y   +++ +   +F +
Sbjct: 50  HQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFRE 109

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +GG  PD  T+  +L  CS  +     + +H D++K G +  L + N L+  Y K  
Sbjct: 110 M-VNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCG 168

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           CL  ARRVF EM  KD VS+N+++ G+A     ++A+++  EM+  G KP   T A+ + 
Sbjct: 169 CLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMP 228

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A                           VAN      +  + V+   K+F  +   + +S
Sbjct: 229 A---------------------------VAN------TSSENVLYVEKIFVNLERKNLIS 255

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +NVMI  Y  N    +++ L+ +++  R +     F+++L    +   L +GR+IH    
Sbjct: 256 WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVE 315

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                  + + NSL+DMYA+CG  ++AK +F  +       WT++ISAY   G    A+ 
Sbjct: 316 KKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVA 375

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMY 421
           LF EM  +  + D   F +IL A +    L  G+               +   + L+D+ 
Sbjct: 376 LFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLL 435

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
            ++G + +A    K+MP E N   W  L+S+C    +    + + ++++     QSGY
Sbjct: 436 GRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGY 493



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 37/352 (10%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F  L   +    D++  +++HT      +     +   L+  YA CG     +++F  +S
Sbjct: 21  FGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS 80

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + V +  MI +YV     ++ L +F EM       D  T+  +L+A +   +L  G  
Sbjct: 81  DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLL 140

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H  V++ G   N+F G+ L+ MY K G L +A + F EM  +++VSWN++++  A N  
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMR 200

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
               L+   +M   G +PD  ++ S++ A ++     E + Y   +    + R     + 
Sbjct: 201 FDDALEICREMEDYGQKPDGCTMASLMPAVANTS--SENVLYVEKIFVNLE-RKNLISWN 257

Query: 518 SMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC----------RIHKNLEFA 564
            M+ +  ++    +A  L  QM     EPD I ++SV+ +C          RIH+ +E  
Sbjct: 258 VMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKK 317

Query: 565 K---------------------KAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           K                       A ++F   K RD A + ++ + Y + GQ
Sbjct: 318 KLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQ 369



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 1/182 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+  T+++ M       S N+    ++F ++  +  +SW ++I  Y + +   +A  L++
Sbjct: 218 PDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYL 277

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M      +PD +TFA++L  C +        ++H  + K      L++ NSL+D Y + 
Sbjct: 278 QMEK-CRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC 336

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            CLD A+RVF  M  +D  S+ +LI+ +   G    A+ LF EM + G  P    F A L
Sbjct: 337 GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAIL 396

Query: 182 SA 183
           SA
Sbjct: 397 SA 398


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/580 (40%), Positives = 362/580 (62%), Gaps = 2/580 (0%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P    +   L     L  +  G+ VH  V+ +NF  ++ + N+LL +Y++   +  AR
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           +LF EMP  D VS+  MIT YA N++  ++L LF  +     + ++F  S+L+       
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
               GRQIH         S V V +SLVDMYA+CG   EA  +F  L   + V W A+I+
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            Y +KG  EEAL LF+ M R      + T++++L + + +  L  GK LH+ +++S    
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             + G+ LL MYAKSGS++DA + F ++ + ++VS N+++   AQ+G  +   + F++M+
Sbjct: 310 VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMI 369

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           + G +P+ ++ LSVL+ACSH  L++EG  YF  M +KY + PK  HYA++VD+L R+G  
Sbjct: 370 RFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGLL 428

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           D+A+  + +MP EP   +W +++ + ++HKN E    AA ++F+++       +  ++NI
Sbjct: 429 DQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDP-SYPGTHTLLANI 487

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+WE V++V+K M++ GV+K  A SWVE+++ VHVF AND  HPQ  +I +  E L
Sbjct: 488 YASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKL 547

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
            Q++K+ GY PDTS  L   D++ K  +L+YHSE+LA++FAL+NTP GS I +MKN+R C
Sbjct: 548 NQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVC 607

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH+AIK +S +  REI VRD++RFHHF DGFCSC D+W
Sbjct: 608 GDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 203/392 (51%), Gaps = 1/392 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G  +PD   + TLL  C++     E   VH  ++   +   L+I NSL+  Y +
Sbjct: 62  LDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYAR 121

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ ARR+F EMP +D VS+ ++ITG+A+     +A+ LF  M   G +P++FT ++ 
Sbjct: 122 CGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSL 181

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +     +A    GRQ+HA   K     NVFV ++L+D+Y++   + EA  +F ++   + 
Sbjct: 182 VKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNE 241

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  YA   + +E+L LF  +Q   +  ++F +S LLS  ++   L+ G+ +H  
Sbjct: 242 VSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAH 301

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            + ++      V N+L+ MYAK G   +A+++F  L  +  V   +M+  Y Q G  +EA
Sbjct: 302 LMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEA 361

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
              F EM R  I  +  TF S+L A +    L  GK     + +      V   + ++D+
Sbjct: 362 AQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDL 421

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
             ++G L  A    +EMP E  +  W AL+ A
Sbjct: 422 LGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 199/358 (55%), Gaps = 6/358 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + V  N L+  Y + G+L  AR LF+ M  R  VSWT +I GY+Q ++  +A  LF  M
Sbjct: 107 HDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRM 166

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            +D G++P+  T ++L+  C    + N   Q+HA   K+G +S + + +SLVD Y +   
Sbjct: 167 LSD-GAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGY 225

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  VF ++  K+ VS+NALI G+A++G  EEA+ LFV MQ  G++P++FT++A LS+
Sbjct: 226 LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              +  +  G+ +HA ++K++     +V N LL +Y+K   + +A K+F ++ +VD VS 
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSC 345

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N M+  YA +   KE+ + F E+     + +   F ++L+  ++   L  G+  H   ++
Sbjct: 346 NSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGK--HYFGLM 403

Query: 304 TTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
                E KV++  ++VD+  + G  ++AK     +    TV  W A++ A     N E
Sbjct: 404 RKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTE 461



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 1/234 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y + G L  A  +F+ +  +  VSW  LI GY++K +  EA  LFV 
Sbjct: 207 HSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVR 266

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + G  P   T++ LLS CS      +   +HA ++K     +  + N+L+  Y K  
Sbjct: 267 MQRE-GYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSG 325

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A +VF ++ + D VS N+++ G+A+ GL +EA + F EM   G +P+D TF + L+
Sbjct: 326 SIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLT 385

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A      +  G+     + K N    V     ++DL  +   + +A+    EMP
Sbjct: 386 ACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP 439



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 2/183 (1%)

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            ++  D+  + ++L+   +L  L  GK +H  V+ S F  ++   ++LL MYA+ GSL+ 
Sbjct: 68  GSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEG 127

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F EMP R++VSW ++I+  AQN  A   L  F  M+  G +P+  +L S++  C +
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY 187

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
                 G Q  ++   KY         +S+VD+  R G   EA  +  ++  + +E+ W+
Sbjct: 188 MASYNCGRQ-IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK-NEVSWN 245

Query: 550 SVI 552
           ++I
Sbjct: 246 ALI 248


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/750 (36%), Positives = 402/750 (53%), Gaps = 74/750 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+   ++GN+  AR  F +M  RT  S+  L+ GY +      A  LF  M +    
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 70  DPDYVTFATLLSGCSE-----PDTANEL--IQVHADIIKFGYNSILIICNSLVDSYCKIR 122
             D  ++  L+SG S      PD A  L  I     ++ F          SL+  Y +  
Sbjct: 78  --DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSF---------TSLLRGYVRHG 126

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A R+F++MP+++ VS+  L+ G    G   EA +LF EM                 
Sbjct: 127 LLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD--------------- 171

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                                    +V    A+L  Y +   + EAR LF EMP+ + VS
Sbjct: 172 ------------------------RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVS 207

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ YA N +   + KLF  +     +R++  ++ +L        +Q G  +     
Sbjct: 208 WTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGY-----IQAG-HVEDAAE 257

Query: 303 VTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +  A+ E  VA  N+++  + + G  + AK +F  +       W+AMI AY Q   L EA
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEA 317

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+ F EM    +  +  +  SIL   A LA L  G+++H+ ++R  F  +VF+ SAL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G+L  A + F     ++IV WN++I+  AQ+G  +  L  F DM  +G  PD ++ 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +  L+ACS+ G ++EG + FNSMT    +RP  EHY+ MVD+L RSG  +EA  L+  MP
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD ++W +++ +CR+H+N E A+ AA +L ++E   +A PYV +S+IY   G+WE  S
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEP-GNAGPYVLLSHIYTSVGRWEDAS 556

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYK 659
           +++K +  R + K    SW+E   +VH+FT+ D L HP+   I R +E L   + + GY 
Sbjct: 557 KMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYS 616

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
            D S  LHD DEE K  SL+YHSER A+A+ L+  PEG PI VMKNLR C DCH+AIKLI
Sbjct: 617 ADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLI 676

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KIT REI +RD++RFHHFKDGFCSCRD+W
Sbjct: 677 AKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 217/458 (47%), Gaps = 52/458 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + VS   L+ GYV+ G LA A  LF  M +R  VS+T+L+GG     +  EA +LF +M 
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                D D V +  +LSG  +     E   +  ++ K      ++   +++  Y +   +
Sbjct: 170 ----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN----VVSWTAMISGYAQNGEV 221

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           +LAR++F+ MP+++ VS+ A++ G+ + G  E+A +LF  M                   
Sbjct: 222 NLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----------------- 264

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                                   V   NA++  + +   V  A+ +F +M E D  +++
Sbjct: 265 ----------------------HPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWS 302

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y  NE   E+L  FRE+ + R  R  +P   ++L+V A    L  GR++H   + 
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            +   +V   ++L+ MY KCG  ++AK +F        V W +MI+ Y Q G  E+AL +
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
           F +M  A +S D  T+   L A +    +  G+++ +S  + S         S ++D+  
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLG 481

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +SG +++A    K MP E + V W AL+ AC  + +A+
Sbjct: 482 RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 183/362 (50%), Gaps = 11/362 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ V+   ++SGY ++G +  AR LF+ M  R  VSWT +I GY+Q  +   A KLF
Sbjct: 169 MPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF 228

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +       ++  A++        +  CN+++  + +
Sbjct: 229 EVM-----PERNEVSWTAMLVGYIQAGH----VEDAAELFNAMPEHPVAACNAMMVGFGQ 279

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A+ VF++M ++D  +++A+I  + +     EA+  F EM   G +P+  +  + 
Sbjct: 280 RGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+    LA +  GR+VHA +++ +F  +VF  +AL+ +Y K   + +A+++F      D 
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +N MIT YA +   +++L +F +++          +   L+  +    ++ GR+I   
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             V ++I    +  + +VD+  + G  EEA ++  N+      V W A++ A     N E
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519

Query: 359 EA 360
            A
Sbjct: 520 IA 521


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/742 (33%), Positives = 412/742 (55%), Gaps = 13/742 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM---RTDGGSDPD 72
           ++  G LA AR++F+ +    A ++  LI  YS +  F  A  L+  M   R      P+
Sbjct: 43  HIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVP----PN 98

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             TF  +L  CS          +HA     G ++ L +  +L+D Y +      A  VF 
Sbjct: 99  KYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIA 191
           +MP +D V++NA++ G+A  G+   AI   ++MQ   G +P+  T  + L        + 
Sbjct: 159 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218

Query: 192 LGRQVHAFVVKTNFVEN---VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            G  VHA+ ++    +N   V +  ALLD+Y+K   +V A ++F  M   + V+++ +I 
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278

Query: 249 CYAWNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            +   ++  E+  LF+++        S    ++ L V A+  DL++G Q+H     +   
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +++   NSL+ MYAK G   EA  +F  ++   T+ + A++S YVQ G  EEA  +F +M
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              N+  D AT  S++ A + LA+L  G+  H  VI  G        ++L+DMYAK G +
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRI 458

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             + Q F +MP R+IVSWN +I+    +G  +     F  M   G++PD V+ + +++AC
Sbjct: 459 DLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAAC 518

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+ EG  +F++MT KY + P+ EHY  MVD+L R G  DEA + +  MP + D  +
Sbjct: 519 SHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRV 578

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CRIHKN++  K+ +  + K+        +V +SNI++ AG+++  ++V+   +
Sbjct: 579 WGALLGACRIHKNIDLGKQVSRMIQKLGP-EGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 637

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            +G +K    SW+E+   +H F   D+ HP + +I  +++N++ ++KK GY+ DTS  L 
Sbjct: 638 VKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQ 697

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D +EE K ++L YHSE+LAIAF +++  E   I V KNLR C DCH AIK ++ +  R I
Sbjct: 698 DLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTI 757

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD++RFHHFK+G CSC DFW
Sbjct: 758 IVRDANRFHHFKNGQCSCGDFW 779



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 217/450 (48%), Gaps = 6/450 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  LI  Y++      A  +F  M  R  V+W  ++ GY+    +  A    +DM+  GG
Sbjct: 137 STALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGG 196

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS---ILIICNSLVDSYCKIRCLD 125
             P+  T  +LL   ++     +   VHA  ++   +     ++I  +L+D Y K + L 
Sbjct: 197 LRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLV 256

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAG 184
            A RVF  M  ++ V+++ALI GF       EA  LF +M   G    S  + A+AL   
Sbjct: 257 YACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVC 316

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LAD+ +G Q+HA + K+    ++   N+LL +Y+K   + EA  LF E+   D +SY 
Sbjct: 317 ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYG 376

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +++ Y  N + +E+  +F+++Q            +L+   ++   LQ GR  H   I+ 
Sbjct: 377 ALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR 436

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               E  + NSL+DMYAKCGR + ++++F  +     V W  MI+ Y   G  +EA  LF
Sbjct: 437 GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLF 496

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
           + M       D  TF  ++ A +    ++ GK    +   + G +  +     ++D+ A+
Sbjct: 497 LSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 556

Query: 424 SGSLKDAIQTFKEMPER-NIVSWNALISAC 452
            G L +A Q  + MP + ++  W AL+ AC
Sbjct: 557 GGFLDEAYQFIQSMPLKADVRVWGALLGAC 586



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 200/453 (44%), Gaps = 52/453 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K  +L  A  +F+ M  R  V+W+ LIGG+   ++  EAF LF DM  +G    
Sbjct: 245 LLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFL 304

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              + A+ L  C+         Q+HA + K G ++ L   NSL+  Y K   ++ A  +F
Sbjct: 305 SATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLF 364

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+  KD++S+ AL++G+ + G  EEA  +F +MQ    +P   T  + + A   LA + 
Sbjct: 365 DEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQ 424

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR  H  V+         + N+L+D+Y+K   +  +R++F +MP  D VS+N MI  Y 
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYG 484

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +   KE+  LF  ++   F+     F  L++  ++                        
Sbjct: 485 IHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS----------------------- 521

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH-ISTVP----WTAMISAYVQKGNLEEALNLFIE 366
                       G   E K  F  ++H    +P    +  M+    + G L+EA      
Sbjct: 522 ------------GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQS 569

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--------FMSNVFSGSALL 418
           M    + AD   + ++L A     ++ LGKQ+   + + G         +SN+FS +   
Sbjct: 570 M---PLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRF 626

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           D  A+   ++  ++ FK+ P  + +  N  + A
Sbjct: 627 DEAAEVRIIQK-VKGFKKSPGCSWIEINGSLHA 658



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 2/135 (1%)

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L+ +   G L  A Q F  +P  +  ++NALI A +  G   A +  +  M+     P+ 
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            +   VL ACS    +  G +  ++      L        +++D+  R   F  A  + A
Sbjct: 100 YTFPFVLKACSALADLCAG-RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158

Query: 538 QMPFEPDEIMWSSVI 552
           +MP   D + W++++
Sbjct: 159 KMPMR-DVVAWNAML 172


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/647 (34%), Positives = 393/647 (60%), Gaps = 2/647 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y   G L  AR++F+ M +R  V W +++ GY +      A +LF DMR  G  +P
Sbjct: 187 LIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASG-CEP 245

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T A  LS  +        +Q+H   +K+G  S + + N+LV  Y K +CLD   ++F
Sbjct: 246 NFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+ D V++N +I+G  + G  ++A+ LF +MQ  G +P   T  + L A   L    
Sbjct: 306 GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H ++V+     +VF+ +AL+D+Y K   V  A+ ++     +D V  + MI+ Y 
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   +E++K+FR L       +    +++L   A+   +++G+++H+  +         
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++L+DMYAKCGR + +  IF+ +S    V W +MIS++ Q G  EEALNLF EMC   
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +     T +S+L A A L ++  GK++H  VI+    +++F+ SAL+DMY K G+L+ A 
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ MPE+N VSWN++I++    G  + ++     M + G++ D V+ L+++SAC+H G
Sbjct: 606 RVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAG 665

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EGL+ F  MT++Y++ P+ EH+A MVD+  R+G  D+A +L+  MPF+PD  +W ++
Sbjct: 666 QVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGAL 725

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H+N+E A+ A+ +LFK++   ++  YV MSNI AVAG+W+ VS+V++ M++  V
Sbjct: 726 LHACRVHRNVELAEIASQELFKLDP-HNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKV 784

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
           +K+  YSWV++ +  H+F A D+ HP + +I   +++++ E+++EG+
Sbjct: 785 QKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 180/689 (26%), Positives = 332/689 (48%), Gaps = 36/689 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +T     L+  YV +     A  +F+S+       A+ W  LI G +    +R A   ++
Sbjct: 74  DTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133

Query: 62  DMRTDGGSD-PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M     +  PD  TF  ++  C+          VH      G +  + + ++L+  Y  
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  AR+VF  M ++D V +N ++ G+ K G    A++LF +M+  G +P+  T A  
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS     +D+  G Q+H   VK      V VAN L+ +Y+K  C+ +  KLFG MP  D 
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V++N MI+    N    ++L LF ++Q +          +LL  + +      G+++H  
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +      +V + ++LVD+Y KC     A+ ++ +   I  V  + MIS YV  G  +EA
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           + +F  +    I  +    AS+L A A +A++ LG++LHS+ +++ +    +  SAL+DM
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G L  +   F ++  ++ V+WN++IS+ AQNG+ +  L  F +M   G +  +V++
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            SVLSAC+    I  G +  + +  K  +R      ++++D+  + G  + A ++   MP
Sbjct: 554 SSVLSACASLPAIYYGKE-IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612

Query: 541 FEPDEIMWSSVINS----CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            E +E+ W+S+I S      + +++   +   ++ FK     D   ++A+ +  A AGQ 
Sbjct: 613 -EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKA----DHVTFLALVSACAHAGQV 667

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +   ++ + M E            ++  ++  F    +L+ +  ++ + +E L+ +M   
Sbjct: 668 QEGLRLFRCMTEE----------YQIAPRMEHFACMVDLYSRAGKLDKAME-LIVDMP-- 714

Query: 657 GYKPDT--------SCALHDEDEEIKVES 677
            +KPD         +C +H   E  ++ S
Sbjct: 715 -FKPDAGIWGALLHACRVHRNVELAEIAS 742



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 10/272 (3%)

Query: 291 LQIGRQIHTQTIVTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS---TVPWTA 346
           L +G Q+H + +      ++  +   LV MY    RF +A  +F++L   +    +PW  
Sbjct: 55  LSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNW 114

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA---DQATFASILRASAELASLSLGKQLHSFVI 403
           +I      G+   AL  +++M  A+ SA   D  TF  ++++ A L +++LG+ +H    
Sbjct: 115 LIRGLTMAGDYRSALLFYLKMW-AHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTAR 173

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
             G   ++F GSAL+ MYA  G L DA Q F  M ER+ V WN ++    + G   + ++
Sbjct: 174 TLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F DM  SG +P+  +L   LS  +    +  G+Q  +++  KY L  +     ++V + 
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQ-LHTLAVKYGLESEVAVANTLVSMY 292

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            +  C D+  KL   MP + D + W+ +I+ C
Sbjct: 293 AKCKCLDDGWKLFGLMPRD-DLVTWNGMISGC 323



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 8/180 (4%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           ++LR     + LSLG Q+H   + +G   ++    + L+ MY  +   +DA+  F  +P 
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 440 RN---IVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIE 494
                 + WN LI      GD ++ L  +  M    S   PDS +   V+ +C+  G I 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G +  +   +   L       ++++ +    G   +A ++   M  E D ++W+ +++ 
Sbjct: 164 LG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVLWNVMMDG 221


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/742 (34%), Positives = 403/742 (54%), Gaps = 58/742 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           T   IS + + G +  AR +F+ +  +T  SW  ++ GY    +  EA KLF  M     
Sbjct: 19  TQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM----- 73

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T                                 I  N LV  Y K   +  AR
Sbjct: 74  --PERNT---------------------------------ISWNGLVSGYVKNGMISEAR 98

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF +MP+++ VS+ +++ G+ +EGL +EA  LF  M     + +  ++   L   +   
Sbjct: 99  KVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTVMLGGLIEDG 154

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +   R++   +     V++V  +  ++        + EAR++F EMP+ + V++  MI+
Sbjct: 155 RVDEARRLFDMIP----VKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMIS 210

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N +   + KLF  +     D+++  ++ +L        +    ++         + 
Sbjct: 211 GYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYTRSGRINEAAELFK----AMPVK 262

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V   N ++  +   G   +A+ +F  +       W+A+I  Y +KG   EAL LF  M 
Sbjct: 263 PVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQ 322

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R  +  +  +  SIL     LASL  G+Q+HS ++RS F  +++  S L+ MY K G L 
Sbjct: 323 REGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLV 382

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
              + F     ++IV WN++I+  AQ+G  +  L+ F +M  SG  PD ++ + VLSAC 
Sbjct: 383 TGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACG 442

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           + G ++EGL+ F SM  KY++  K EHYA MVD+L R+G  +EA  L+  MP E D I+W
Sbjct: 443 YTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 502

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++++CR HKNL+ A+ AA +L ++E    A PY+ +SN+YA   +W+ V++++K MR 
Sbjct: 503 GALLSACRTHKNLDLAEIAAKKLLQLEP-SSAGPYILLSNLYASQSRWKDVAELRKTMRA 561

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           R V K    SW+E+ +KVH+FT      HP+   I +K+E L   +++ GY PD S  +H
Sbjct: 562 RNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMH 621

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE KV SL++HSE++A+A+ L+  P G PI VMKNLR C DCH+AIKLI+++TGREI
Sbjct: 622 DVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREI 681

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD++RFHHFKDG CSCRDFW
Sbjct: 682 ILRDANRFHHFKDGLCSCRDFW 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 225/455 (49%), Gaps = 21/455 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT+S N L+SGYVK+G ++ AR++F+ M +R  VSWT ++ GY Q+    EA  LF
Sbjct: 73  MPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLF 132

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  E    +E  ++  D+I       ++   +++   C 
Sbjct: 133 WRM-----PEKNVVSWTVMLGGLIEDGRVDEARRLF-DMIPV---KDVVASTNMIGGLCS 183

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  AR +F EMPQ++ V++ ++I+G+A     + A KLF  M       ++ T+ A 
Sbjct: 184 EGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAM 239

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L        I       A + K   V+ V   N ++  +  +  V +AR +F +M E D 
Sbjct: 240 LKGYTRSGRI----NEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDD 295

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHT 299
            +++ +I  Y       E+L LF  +Q     R  FP   ++LSV  +   L  GRQ+H+
Sbjct: 296 GTWSALIKIYERKGFELEALALFSLMQREGV-RPNFPSIISILSVCGSLASLDHGRQVHS 354

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           Q + +    ++ V++ L+ MY KCG     K +F   S    V W ++I+ Y Q G  E+
Sbjct: 355 QLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK 414

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALL 418
           AL +F EM  +  + D+ TF  +L A      +  G ++  S   +          + ++
Sbjct: 415 ALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMV 474

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           D+  ++G L +A+   + MP E + + W AL+SAC
Sbjct: 475 DLLGRAGKLNEAMNLIENMPVEADAIVWGALLSAC 509



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 68/407 (16%)

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           ++ F  +  +    +  +++   +  AR +F ++      S+N ++  Y  N++  E+ K
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           LF ++     +R+   +                                   N LV  Y 
Sbjct: 69  LFDKMP----ERNTISW-----------------------------------NGLVSGYV 89

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           K G   EA+++F  +   + V WT+M+  YVQ+G ++EA  LF  M   N+     ++  
Sbjct: 90  KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNV----VSWTV 145

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L    E   +   ++L   +     + +V + + ++      G L +A + F EMP+RN
Sbjct: 146 MLGGLIEDGRVDEARRLFDMIP----VKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRN 201

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS--VSLLSVLSACSHCGLIEEGLQY 499
           +V+W ++IS  A N       K FE M      PD   V+  ++L   +  G I E  + 
Sbjct: 202 VVAWTSMISGYAMNNKVDVARKLFEVM------PDKNEVTWTAMLKGYTRSGRINEAAEL 255

Query: 500 FNSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           F +M       P K   A   M+     +G   +A  +  QM  E D+  WS++I     
Sbjct: 256 FKAM-------PVKPVAACNGMIMGFGLNGEVGKARWVFDQMK-EKDDGTWSALIKIYE- 306

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            K  E    A   L + E +R   P +   +I +V G   S+   ++
Sbjct: 307 RKGFELEALALFSLMQREGVRPNFPSII--SILSVCGSLASLDHGRQ 351



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 15/240 (6%)

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           RS F S+       +  +A+ G +  A   F ++  + + SWNA+++    N       K
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F+ M +     +++S   ++S     G+I E  + F+ M ++  +      + SMV   
Sbjct: 69  LFDKMPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNVV-----SWTSMVRGY 119

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            + G  DEAE L  +MP E + + W+ ++        ++ A++    LF M  ++D    
Sbjct: 120 VQEGLIDEAELLFWRMP-EKNVVSWTVMLGGLIEDGRVDEARR----LFDMIPVKDVVAS 174

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY-SWVELKSKVHVFTANDELHPQTNEI 642
             M       G+     ++   M +R V   T+  S   + +KV V     E+ P  NE+
Sbjct: 175 TNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEV 234


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/682 (36%), Positives = 383/682 (56%), Gaps = 5/682 (0%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P   TF  LL  C+          VHA +   G  S  I   +L + Y K R    ARRV
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ--HLGFKPSDFTFAAALSAGVGLA 188
           F  MP +D V++NA++ G+A+ GL   A++  V MQ    G +P   T  + L A     
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +   R+VHAF ++    E V V+ A+LD Y K   V  AR +F  MP  + VS+N MI 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N    E++ LF  +     D +       L        L   R++H   +     S
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNLEEALNLFIEM 367
            V V N+L+  YAKC R + A ++F  L +  T + W AMI  + Q    E+A  LF  M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              N+  D  T  S++ A A+++     + +H + IR     +V+  +AL+DMY+K G +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F    +R++++WNA+I     +G  QA ++ FE+M  +G  P+  + LSVL+AC
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG +YF SM + Y L P  EHY +MVD+L R+G  DEA   +  MP EP   +
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           + +++ +C++HKN+E A+++A  +F++    +   +V ++NIYA A  W+ V++V+ AM 
Sbjct: 494 YGAMLGACKLHKNVELAEESAQIIFELGP-EEGVYHVLLANIYANASMWKDVARVRTAME 552

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           ++G++K   +S ++LK++VH F +    H    +I  ++  L++E+K  GY PDT  ++H
Sbjct: 553 KKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTD-SIH 611

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D ++++K + L  HSE+LAIA+ LI T  G+ I + KNLR C DCH A KLIS +TGREI
Sbjct: 612 DVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREI 671

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD  RFHHFKDG CSC D+W
Sbjct: 672 IMRDIQRFHHFKDGKCSCGDYW 693



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 227/451 (50%), Gaps = 4/451 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           ++++  L + Y K    A AR +F+ M  R  V+W  ++ GY++      A +  V M+ 
Sbjct: 51  SIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQG 110

Query: 66  D-GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + GG  PD VT  ++L  C++    +   +VHA  ++ G + ++ +  +++D+YCK   +
Sbjct: 111 EEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAV 170

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR VF  MP ++SVS+NA+I G+A  G   EA+ LF  M   G   +D +  AAL A 
Sbjct: 171 EAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQAC 230

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSY 243
             L  +   R+VH  +V+     NV V NAL+  Y+K      A ++F E+  +   +S+
Sbjct: 231 GELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISW 290

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  +  NE  +++ +LF  +Q        F   +++  VA+  D    R IH  +I 
Sbjct: 291 NAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIR 350

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +V V  +L+DMY+KCGR   A+ +F +      + W AMI  Y   G  + A+ L
Sbjct: 351 HQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVEL 410

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYA 422
           F EM       ++ TF S+L A +    +  G++  + + +  G    +     ++D+  
Sbjct: 411 FEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLG 470

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++G L +A    K MP E  I  + A++ AC
Sbjct: 471 RAGKLDEAWSFIKNMPIEPGISVYGAMLGAC 501



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 4/248 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFV 61
           + N   TN LI+ Y K      A ++FN + + +T +SW  +I G++Q     +A +LF 
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFA 311

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M+ +    PD  T  +++   ++     +   +H   I+   +  + +  +L+D Y K 
Sbjct: 312 RMQLE-NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKC 370

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             + +ARR+F     +  +++NA+I G+   G  + A++LF EM+  G  P++ TF + L
Sbjct: 371 GRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVL 430

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +A      +  G++  A + K   +E  +     ++DL  +   + EA      MP   G
Sbjct: 431 AACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPG 490

Query: 241 VS-YNVMI 247
           +S Y  M+
Sbjct: 491 ISVYGAML 498



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 6/168 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI  Y K G ++ AR LF+S  DR  ++W  +I GY      + A +LF +
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+   GS P+  TF ++L+ CS     +E  +  A + K +G    +    ++VD   + 
Sbjct: 414 MKGT-GSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRA 472

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN----EEAIKLFVEM 165
             LD A    K MP +  +S    + G  K   N    EE+ ++  E+
Sbjct: 473 GKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFEL 520


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 399/687 (58%), Gaps = 15/687 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C E  +      +H  ++K G ++ + +  SLV++Y +      AR +F +MP
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +K+ V++ ALITG+       EA+++FVEM   G  PS +T  A L+A     +  LG Q
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH + +K   +    + N+L  +Y+K   +  A + F  +P+ + +++  MI+  A +E 
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260

Query: 256 YKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           Y E  L LF ++       ++F  ++++S+   +LDL +G+Q+          + + V N
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKN 320

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNL 363
           S + +Y + G  +EA   F  +  +S + W AMIS Y Q     K +L       +AL +
Sbjct: 321 STMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  + R+ +  D  TF+SIL   + + +L  G+Q+H+  I++GF+S+V   SAL++MY K
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++DA + F EM  R +V+W ++IS  +Q+G  Q  ++ FEDM  +G +P+ ++ + V
Sbjct: 441 CGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCV 500

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACS+ GL E+   YF+ M ++YK+ P  +HY  MVD+  R G  D+A   + +  FEP
Sbjct: 501 LSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E +WSS++  CR H N+E A  AAD+L ++ + +    YV + N+Y    +W  V++V+
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLIEL-RPKGIETYVLLLNMYISNERWHDVARVR 619

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K M++ G+  +   SW+ +K KV+ F AND+ H  ++E+ + +ENL+++ K  GY+P  S
Sbjct: 620 KLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQS 679

Query: 664 CALHD--EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
             L D  +D++    S+++HSERLA+A  L+ TP G+ + V KN+  C DCH++IK  S 
Sbjct: 680 AELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSL 739

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDF 748
           +  REI VRDS R H FKDG CSC DF
Sbjct: 740 LANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/474 (31%), Positives = 254/474 (53%), Gaps = 17/474 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y++ G    AR LF+ M ++  V+WT LI GY+  +Q  EA ++FV+M  + G  P
Sbjct: 119 LVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEM-LEAGRYP 177

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            + T   +L+ CS  + A+   QVH   IK+   SI  I NSL   Y K   L+ A R F
Sbjct: 178 SHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAF 237

Query: 132 KEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           + +P K+ +++  +I+  A+ E   E  + LF++M   G  P++FT  + +S      D+
Sbjct: 238 RMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDL 297

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LG+QV AF  K     N+ V N+ + LY +     EA + F EM +V  +++N MI+ Y
Sbjct: 298 NLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGY 357

Query: 251 AW-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           A              +  ++LK+FR L+ +      F FS++LSV ++ + L+ G QIH 
Sbjct: 358 AQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHA 417

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           QTI T  +S+V V ++LV+MY KCG  E+A + F  +S  + V WT+MIS Y Q G  +E
Sbjct: 418 QTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQE 477

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSAL 417
           A+ LF +M  A +  ++ TF  +L A +  A L+   + +  +++  +     V     +
Sbjct: 478 AIQLFEDMRFAGVRPNEITFVCVLSACS-YAGLAEKAEHYFDMMKEEYKIEPIVDHYGCM 536

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +DM+ + G L DA    +    E N   W++L++ C  +G+ +    + + +++
Sbjct: 537 VDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIE 590



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 31/374 (8%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L   Y KSG+L +A   F  + D+  ++WT +I   ++   + E    LF+DM  D G
Sbjct: 218 NSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMD-G 276

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      N   QV A   K G  + + + NS +  Y +    D A 
Sbjct: 277 VLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAM 336

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R F+EM     +++NA+I+G+      AK+ L+      +A+K+F  ++    KP  FTF
Sbjct: 337 RFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTF 396

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +KT F+ +V V +AL+++Y+K  C+ +A K F EM  
Sbjct: 397 SSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSI 456

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              V++  MI+ Y+ + + +E+++LF +++F     ++  F  +LS  +       G   
Sbjct: 457 RTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACS-----YAGLAE 511

Query: 298 HTQTIVTTAISEVKVA------NSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAM 347
             +        E K+         +VDM+ + GR ++A   FA +      P    W+++
Sbjct: 512 KAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDA---FAFIRRTGFEPNEAIWSSL 568

Query: 348 ISAYVQKGNLEEAL 361
           ++     GN+E A 
Sbjct: 569 VAGCRSHGNMELAF 582



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           + M R   +   A +  +L    E  SL   + LH  ++++G  +++F  ++L++ Y + 
Sbjct: 67  MAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRC 126

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+ +DA   F +MPE+N+V+W ALI+    N      L+ F +M+++G  P   +L ++L
Sbjct: 127 GASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAML 186

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR----SGCFDEAEKLMAQMP 540
           +ACS     + G     S    Y ++ +     S+ + LCR    SG  + A +    +P
Sbjct: 187 NACSASNNADLG-----SQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVP 241

Query: 541 FEPDEIMWSSVINSCRIHKN 560
            + + I W+++I++C   +N
Sbjct: 242 -DKNVITWTTMISACAEDEN 260



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G +  A + F  M  RT V+WT +I GYSQ  + +EA +LF DMR
Sbjct: 427 DVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMR 486

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII--CNSLVDSYCKIR 122
              G  P+ +TF  +LS CS    A E  + + D++K  Y    I+     +VD + ++ 
Sbjct: 487 F-AGVRPNEITFVCVLSACSYAGLA-EKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLG 544

Query: 123 CLD 125
            LD
Sbjct: 545 RLD 547


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/728 (37%), Positives = 420/728 (57%), Gaps = 13/728 (1%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            Q+   ++ L+SG+ + G    A+ +F  M  R  VS   L+ G  ++ Q   A K+F +M
Sbjct: 315  QDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 374

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELI----QVHADIIKFGYN-SILIICNSLVDSY 118
            +   G + D  ++  LLS  SE     E      +VHA +I+ G N + + I N LV+ Y
Sbjct: 375  KDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMY 432

Query: 119  CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
             K   +  A  VF+ M +KDSVS+N+LI+G  +   +E+A + F  M+  G  PS+FT  
Sbjct: 433  AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLI 492

Query: 179  AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            + LS+   L  I LG Q+H   +K     +V V+NALL LY++  C  E  K+F  MPE 
Sbjct: 493  STLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY 552

Query: 239  DGVSYNVMITCYAWNE-QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D VS+N +I   + +E    +++K F ++    +  S+  F  +LS V++    ++  QI
Sbjct: 553  DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 612

Query: 298  HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGN 356
            H   +      +  + N+L+  Y KCG   E ++IFA +S     V W +MIS Y+    
Sbjct: 613  HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 672

Query: 357  LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            L +A++L   M +     D  TFA+IL A A +A+L  G ++H+  IR+   S+V  GSA
Sbjct: 673  LHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSA 732

Query: 417  LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
            L+DMY+K G +  A + F+ MP RN+ SWN++IS  A++G  +  LK F  M+  G  PD
Sbjct: 733  LVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 792

Query: 477  SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             V+ + VLSACSH G +EEG ++F SM++ Y+L P+ EH++ MVD+L R+G  DE    +
Sbjct: 793  HVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 852

Query: 537  AQMPFEPDEIMWSSVINS-CRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
              MP +P+ ++W +V+ + CR + +N E  ++AA+ L ++E  ++A  YV ++N+YA   
Sbjct: 853  NSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEP-QNAVNYVLLANMYASGE 911

Query: 595  QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
            +WE V++ + AM+E  V+K    SWV +K  VHVF A D+LHP+ + I  K+  L ++M+
Sbjct: 912  KWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMR 971

Query: 655  KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
              GY P T  AL D + E K E L YHSE++A+AF L       PI +MKNLR C DCH+
Sbjct: 972  DAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQ-SALPIRIMKNLRVCGDCHS 1030

Query: 715  AIKLISKI 722
            A   ISKI
Sbjct: 1031 AFGYISKI 1038



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 180/591 (30%), Positives = 305/591 (51%), Gaps = 28/591 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +N LI+ YV+ G+L +A++LF+ M +R  V+W  LI GY+Q  +  EA   F DM 
Sbjct: 105 NLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM- 163

Query: 65  TDGGSDPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
              G  P++  F + L  C E  P      +Q+H  I K  Y S +++CN L+  Y    
Sbjct: 164 VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS-- 221

Query: 123 CLDL---ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG----FKPSDF 175
           CLD    AR VF  +  ++S+S+N++I+ +++ G    A  LF  MQ  G    FKP+++
Sbjct: 222 CLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEY 281

Query: 176 TFAAALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           TF + ++      D  L    Q+ A V K+ F+++++V++AL+  +++     +A+ +F 
Sbjct: 282 TFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFE 341

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ- 292
           +M   + VS N ++      +Q + + K+F E++      S   +  LLS  +    L+ 
Sbjct: 342 QMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFSVLEE 400

Query: 293 ---IGRQIHTQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
               GR++H   ++ T +++ KVA  N LV+MYAK G   +A  +F  +    +V W ++
Sbjct: 401 GRRKGREVHAH-VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 459

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           IS   Q    E+A   F  M R        T  S L + A L  + LG+Q+H   ++ G 
Sbjct: 460 ISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGL 519

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN-GDAQATLKSFE 466
            ++V   +ALL +YA++G   + ++ F  MPE + VSWN++I A + +       +K F 
Sbjct: 520 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 579

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M++ G+    V+ +++LSA S   L E   Q  +++  KY L        +++    + 
Sbjct: 580 QMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYCLSDDTAIGNALLSCYGKC 638

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL-FKMEK 576
           G  +E EK+ A+M    DE+ W+S+I S  IH   E   KA D + F M+K
Sbjct: 639 GEMNECEKIFARMSETRDEVSWNSMI-SGYIHN--ELLHKAMDLVWFMMQK 686



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 264/495 (53%), Gaps = 19/495 (3%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF +L++       + E  ++H   IK+G+   L + N+L++ Y +I  L  A+++F EM
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIAL 192
             ++ V++  LI+G+ + G  +EA   F +M   GF P+ + F +AL A    G +   L
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLY-SKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           G Q+H  + KT +  +V V N L+ +Y S  D   +AR +F  +   + +S+N +I+ Y+
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252

Query: 252 WNEQYKESLKLFRELQ-----FTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVT 304
                  +  LF  +Q     F+ F  +++ F +L++   + +D  L +  Q+  +   +
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFS-FKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKS 311

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             + ++ V+++LV  +A+ G  ++AK IF  +   + V    ++   V++   E A  +F
Sbjct: 312 GFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVF 371

Query: 365 IEMCRANISADQATFASILRASAELASLS----LGKQLHSFVIRSGFMSN-VFSGSALLD 419
            EM +  +  +  ++  +L A +E + L      G+++H+ VIR+G   N V  G+ L++
Sbjct: 372 HEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 430

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAKSG++ DA   F+ M E++ VSWN+LIS   QN  ++   +SF  M ++G  P + +
Sbjct: 431 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFT 490

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
           L+S LS+C+  G I  G Q  +    K  L        +++ +   +GCF E  K+ + M
Sbjct: 491 LISTLSSCASLGWIMLGEQ-IHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLM 549

Query: 540 PFEPDEIMWSSVINS 554
           P E D++ W+SVI +
Sbjct: 550 P-EYDQVSWNSVIGA 563



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 198/397 (49%), Gaps = 20/397 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R++H   +K  FV N+F++N L+++Y +   +  A+KLF EM   + V++  +I+ Y  N
Sbjct: 91  RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN 150

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--ANKLDLQIGRQIHTQTIVTTAISEVK 311
            +  E+   FR++    F  + + F + L     +     ++G QIH     T   S+V 
Sbjct: 151 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 210

Query: 312 VANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           V N L+ MY  C     +A+ +F  +   +++ W ++IS Y ++G+   A +LF  M + 
Sbjct: 211 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 270

Query: 371 NIS----ADQATFASILRASAELASLSLG--KQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +      ++ TF S++  +       L   +Q+ + V +SGF+ +++  SAL+  +A+ 
Sbjct: 271 GLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARF 330

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
           G   DA   F++M  RN+VS N L+    +    +A  K F +M    G   DS  +L  
Sbjct: 331 GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVL-- 388

Query: 484 LSACSHCGLIEEGLQY---FNSMTQKYKLRPKKEHYAS-MVDILCRSGCFDEAEKLMAQM 539
           LSA S   ++EEG +     ++   +  L   K    + +V++  +SG   +A  +   M
Sbjct: 389 LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 448

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             E D + W+S+I+   + +N E ++ AA+   +M +
Sbjct: 449 -VEKDSVSWNSLISG--LDQN-ECSEDAAESFHRMRR 481



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%)

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           C   + +   TF S++            ++LH   I+ GF+ N+F  + L+++Y + G L
Sbjct: 63  CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 122

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F EM  RN+V+W  LIS   QNG        F DMV++G+ P+  +  S L AC
Sbjct: 123 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 182

Query: 488 SHCG 491
              G
Sbjct: 183 QESG 186


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/634 (37%), Positives = 373/634 (58%), Gaps = 10/634 (1%)

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            +LA   +K + + +  S+N++I   A+ G + EA++ F  ++ LG  P+  +F   + + 
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              L D+  GR  H       F  ++FV++AL+D+YSK   + +AR LF E+P  + VS+ 
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 245  VMITCYAWNEQYKESLKLFREL---QFTRFDRSQFPFSTL-----LSVVANKLDLQIGRQ 296
             MIT Y  NEQ   +L LF++    +    D +  P  ++     LS  +      I   
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272

Query: 297  IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
            +H   +       + V N+L+D YAKCG+   +K++F  +     + W +MI+ Y Q G 
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 357  LEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
              EAL +F  M R   +  +  T +++L A A   +L  GK +H  VI+     NV  G+
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392

Query: 416  ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
            +++DMY K G ++ A +TF  M E+N+ SW A+++    +G A+  L  F  MV++G +P
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452

Query: 476  DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
            + ++ +SVL+ACSH GL+EEG  +FN+M  KY + P  EHY  MVD+  R+GC +EA  L
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512

Query: 536  MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
            + +M  +PD ++W S++ +CRIHKN++  + AA +LF+++   +   YV +SN+YA AG+
Sbjct: 1513 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDP-DNCGYYVLLSNLYADAGR 1571

Query: 596  WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
            W  V +++  M+ R + K   +S VELK +VHVF   D+ HP    I + +E L  E++K
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 1631

Query: 656  EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
             GY P+ +  LHD DEE K   L+ HSE+LA+AF ++N+  G+ I ++KNLR C DCH  
Sbjct: 1632 IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 1691

Query: 716  IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IKLISK+  R+  VRDS RFHHFKDG CSC D+W
Sbjct: 1692 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 193/372 (51%), Gaps = 31/372 (8%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           RQ+HA ++++    +  +   L+ LYS H  +  A  LF ++      ++N++I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              +++L L++ +        +F F  ++    N L + +G+ +H   I      +V V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 314 NSLVDMYAKCG--RF-----------------------------EEAKEIFANLSHISTV 342
           N+L+D Y KCG  RF                             +EA+ IF  +   + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WTAMI+ Y++    EEAL LF  M   NI  ++ T  S+++A  E+  L+LG+ +H + 
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I++     V+ G+AL+DMY+K GS+KDAI+ F+ MP +++ +WN++I++   +G  Q  L
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F +M +   +PD+++ + VL AC H   ++EG  YF  MTQ Y + P  EHY  M ++
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 523 LCRSGCFDEAEK 534
             RS   DEA K
Sbjct: 404 YARSNNLDEAFK 415



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 214/450 (47%), Gaps = 24/450 (5%)

Query: 19   SGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
            S NLAT    F   VD++ V SW  +I   ++     EA + F  +R  G   P   +F 
Sbjct: 1091 SSNLAT---WFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLG-LIPTRSSFP 1146

Query: 78   TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
              +  CS           H     FG+ + L + ++L+D Y K   L  AR +F E+P +
Sbjct: 1147 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206

Query: 138  DSVSFNALITGFAKEGLNEEAIKLF-------VEMQHLGFKPSD-FTFAAALSAGVGLAD 189
            + VS+ ++ITG+ +    + A+ LF        E++     P D     + LSA   ++ 
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 1266

Query: 190  IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              +   VH FVVK  F  ++ V N L+D Y+K    + ++K+F  M E D +S+N MI  
Sbjct: 1267 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326

Query: 250  YAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA +    E+L++F  + +      +    S +L   A+   L+ G+ IH Q I      
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386

Query: 309  EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
             V V  S++DMY KCGR E AK+ F  +   +   WTAM++ Y   G  +EAL++F +M 
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446

Query: 369  RANISADQATFASILRASAELASLSLGKQL-----HSFVIRSGFMSNVFSGSALLDMYAK 423
            RA +  +  TF S+L A +    +  G        H + I  G    +     ++D++ +
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPG----IEHYGCMVDLFGR 1502

Query: 424  SGSLKDAIQTFKEMPER-NIVSWNALISAC 452
            +G L +A    K M  + + V W +L+ AC
Sbjct: 1503 AGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 1532



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 32/379 (8%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L Q+HA II+ G ++  ++   L+  Y     +  A  +F ++    + ++N +I    
Sbjct: 42  HLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANT 101

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
             GL+E+A+ L+  M   G     FTF   + A      I LG+ VH  ++K  F  +VF
Sbjct: 102 INGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVF 161

Query: 211 VANALLDLYSK--H---------------------------DC--VVEARKLFGEMPEVD 239
           V N L+D Y K  H                            C  + EAR++F E+P  +
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+  MI  Y  N+Q +E+L+LF+ +Q      +++   +L+        L +GR IH 
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I       V +  +L+DMY+KCG  ++A E+F  +   S   W +MI++    G  +E
Sbjct: 282 YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQE 341

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALL 418
           ALNLF EM R N+  D  TF  +L A   + ++  G    + + +  G          + 
Sbjct: 342 ALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMT 401

Query: 419 DMYAKSGSLKDAIQTFKEM 437
           ++YA+S +L +A ++ KE+
Sbjct: 402 ELYARSNNLDEAFKSTKEV 420



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 173/352 (49%), Gaps = 10/352 (2%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT--- 65
            ++ LI  Y K G L  AR LF+ +  R  VSWT +I GY Q  Q   A  LF D      
Sbjct: 1180 SSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 1239

Query: 66   ---DGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
               DG + P D V   ++LS CS          VH  ++K G++  + + N+L+D+Y K 
Sbjct: 1240 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC 1299

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAA 180
                ++++VF  M +KD +S+N++I  +A+ GL+ EA+++F  M +H+G + +  T +A 
Sbjct: 1300 GQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAV 1359

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
            L A      +  G+ +H  V+K +   NV V  +++D+Y K   V  A+K F  M E + 
Sbjct: 1360 LLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNV 1419

Query: 241  VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
             S+  M+  Y  + + KE+L +F ++       +   F ++L+  ++   ++ G      
Sbjct: 1420 KSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNA 1479

Query: 301  TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
                  I   ++    +VD++ + G   EA  +   +      V W +++ A
Sbjct: 1480 MKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 33/353 (9%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           T  LI  Y   G +A A  LF  + +    +W ++I   +      +A  L+ +M   G 
Sbjct: 62  TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK-------- 120
           +  D  TF  ++  C+   + +    VH  +IK+G++  + + N+L+D Y K        
Sbjct: 122 A-ADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180

Query: 121 ---------------------IRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
                                I C DL  ARR+F E+P K+ VS+ A+I G+ +    EE
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A++LF  MQ     P+++T  + + A   +  + LGR +H + +K      V++  AL+D
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   + +A ++F  MP     ++N MIT    +   +E+L LF E++          
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV-KVANSLVDMYAKCGRFEEA 329
           F  +L    +  +++ G    T+      I+ + +    + ++YA+    +EA
Sbjct: 361 FIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 157/370 (42%), Gaps = 81/370 (21%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQIH + I +   ++  +   L+ +Y+  GR   A  +F  + +  T  W  +I A    
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  E+AL L+  M    I+AD+ TF  +++A     S+ LGK +H  +I+ GF  +VF  
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM------ 468
           + L+D Y K G  + A++ F++M  RN+VSW  +IS     GD Q   + F+++      
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 469 ----VQSGYQ---------------------PDSVSLLSVLSAC---------------- 487
               + +GY                      P+  +++S++ AC                
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 488 -------------------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
                              S CG I++ ++ F +M +K         + SM+  L   G 
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-----SLPTWNSMITSLGVHGL 338

Query: 529 FDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP--- 582
             EA  L ++M     +PD I +  V+ +C   KN+   K+      +M +    AP   
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV---KEGCAYFTRMTQHYGIAPIPE 395

Query: 583 -YVAMSNIYA 591
            Y  M+ +YA
Sbjct: 396 HYECMTELYA 405



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 1/190 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N VS   +ISG +  G+L  AR +F+ +  +  VSWT +I GY +  Q  EA +LF  M
Sbjct: 189 RNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM 248

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +    P+  T  +L+  C+E         +H   IK      + +  +L+D Y K   
Sbjct: 249 QAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGS 307

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A  VF+ MP+K   ++N++IT     GL +EA+ LF EM+ +  KP   TF   L A
Sbjct: 308 IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCA 367

Query: 184 GVGLADIALG 193
            V + ++  G
Sbjct: 368 CVHIKNVKEG 377


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/750 (36%), Positives = 402/750 (53%), Gaps = 74/750 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+   ++GN+  AR  F +M  RT  S+  L+ GY +      A  LF  M +    
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 70  DPDYVTFATLLSGCSE-----PDTANEL--IQVHADIIKFGYNSILIICNSLVDSYCKIR 122
             D  ++  L+SG S      PD A  L  I     ++ F          SL+  Y +  
Sbjct: 78  --DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSF---------TSLLRGYVRHG 126

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A R+F++MP+++ VS+  L+ G    G   EA +LF EM                 
Sbjct: 127 LLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD--------------- 171

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                                    +V    A+L  Y +   + EAR LF EMP+ + VS
Sbjct: 172 ------------------------RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVS 207

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ YA N +   + KLF  +     +R++  ++ +L        +Q G  +     
Sbjct: 208 WTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGY-----IQAG-HVEDAAE 257

Query: 303 VTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +  A+ E  VA  N+++  + + G  + AK +F  +       W+AMI AY Q   L EA
Sbjct: 258 LFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEA 317

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+ F EM    +  +  +  SIL   A LA L  G+++H+ ++R  F  +VF+ SAL+ M
Sbjct: 318 LSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM 377

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G+L  A + F     ++IV WN++I+  AQ+G  +  L  F DM  +G  PD ++ 
Sbjct: 378 YIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITY 437

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +  L+ACS+ G ++EG + FNSMT    +RP  EHY+ MVD+L RSG  +EA  L+  MP
Sbjct: 438 IGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD ++W +++ +CR+H+N E A+ AA +L ++E   +A PYV +S+IY   G+WE  S
Sbjct: 498 VEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEP-GNAGPYVLLSHIYTSVGRWEDAS 556

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYK 659
           +++K +  R + K    SW+E   +VH+FT+ D L HP+   I R +E L   + + GY 
Sbjct: 557 KMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYS 616

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
            D S  LHD DEE K  SL+YHSER A+A+ L+  PEG PI VMKNLR C DCH+AIKLI
Sbjct: 617 ADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLI 676

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +KIT REI +RD++RFHHFKDGFCSCRD+W
Sbjct: 677 AKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 217/458 (47%), Gaps = 52/458 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + VS   L+ GYV+ G LA A  LF  M +R  VS+T+L+GG     +  EA +LF +M 
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                D D V +  +LSG  +     E   +  ++ K      ++   +++  Y +   +
Sbjct: 170 ----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN----VVSWTAMISGYAQNGEV 221

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           +LAR++F+ MP+++ VS+ A++ G+ + G  E+A +LF  M                   
Sbjct: 222 NLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE----------------- 264

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                                   V   NA++  + +   V  A+ +F +M E D  +++
Sbjct: 265 ----------------------HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y  NE   E+L  FRE+ + R  R  +P   ++L+V A    L  GR++H   + 
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            +   +V   ++L+ MY KCG  ++AK +F        V W +MI+ Y Q G  E+AL +
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
           F +M  A +S D  T+   L A +    +  G+++ +S  + S         S ++D+  
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLG 481

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +SG +++A    K MP E + V W AL+ AC  + +A+
Sbjct: 482 RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 183/362 (50%), Gaps = 11/362 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ V+   ++SGY ++G +  AR LF+ M  R  VSWT +I GY+Q  +   A KLF
Sbjct: 169 MPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF 228

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +       ++  A++        +  CN+++  + +
Sbjct: 229 EVM-----PERNEVSWTAMLVGYIQAGH----VEDAAELFNAMPEHPVAACNAMMVGFGQ 279

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A+ VF++M ++D  +++A+I  + +     EA+  F EM   G +P+  +  + 
Sbjct: 280 RGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+    LA +  GR+VHA +++ +F  +VF  +AL+ +Y K   + +A+++F      D 
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +N MIT YA +   +++L +F +++          +   L+  +    ++ GR+I   
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             V ++I    +  + +VD+  + G  EEA ++  N+      V W A++ A     N E
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE 519

Query: 359 EA 360
            A
Sbjct: 520 IA 521


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/655 (37%), Positives = 381/655 (58%), Gaps = 15/655 (2%)

Query: 104  YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV 163
            YNSIL    S  + +      +LA   +K + + +  S+N++I   A+ G + EA++ F 
Sbjct: 1950 YNSILFGVPSGREDHS-----NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFS 2004

Query: 164  EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
             ++ LG  P+  +F   + +   L D+  GR  H       F  ++FV++AL+D+YSK  
Sbjct: 2005 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG 2064

Query: 224  CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL---QFTRFDRSQFPFST 280
             + +AR LF E+P  + VS+  MIT Y  NEQ   +L LF++    +    D +  P  +
Sbjct: 2065 QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDS 2124

Query: 281  L-----LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
            +     LS  +      I   +H   +       + V N+L+D YAKCG+   +K++F  
Sbjct: 2125 VVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDW 2184

Query: 336  LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSL 394
            +     + W +MI+ Y Q G   EAL +F  M R   +  +  T +++L A A   +L  
Sbjct: 2185 MEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRA 2244

Query: 395  GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            GK +H  VI+     NV  G++++DMY K G ++ A +TF  M E+N+ SW A+++    
Sbjct: 2245 GKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM 2304

Query: 455  NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
            +G A+  L  F  MV++G +P+ ++ +SVL+ACSH GL+EEG  +FN+M  KY + P  E
Sbjct: 2305 HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE 2364

Query: 515  HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
            HY  MVD+  R+GC +EA  L+ +M  +PD ++W S++ +CRIHKN++  + AA +LF++
Sbjct: 2365 HYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFEL 2424

Query: 575  EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
            +   +   YV +SN+YA AG+W  V +++  M+ R + K   +S VELK +VHVF   D+
Sbjct: 2425 DP-DNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 2483

Query: 635  LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
             HP    I + +E L  E++K GY P+ +  LHD DEE K   L+ HSE+LA+AF ++N+
Sbjct: 2484 EHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNS 2543

Query: 695  PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
              G+ I ++KNLR C DCH  IKLISK+  R+  VRDS RFHHFKDG CSC D+W
Sbjct: 2544 APGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 193/372 (51%), Gaps = 31/372 (8%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           RQ+HA ++++    +  +   L+ LYS H  +  A  LF ++      ++N++I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              +++L L++ +        +F F  ++    N L + +G+ +H   I      +V V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 314 NSLVDMYAKCG--RF-----------------------------EEAKEIFANLSHISTV 342
           N+L+D Y KCG  RF                             +EA+ IF  +   + V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WTAMI+ Y++    EEAL LF  M   NI  ++ T  S+++A  E+  L+LG+ +H + 
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I++     V+ G+AL+DMY+K GS+KDAI+ F+ MP +++ +WN++I++   +G  Q  L
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F +M +   +PD+++ + VL AC H   ++EG  YF  MTQ Y + P  EHY  M ++
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 523 LCRSGCFDEAEK 534
             RS   DEA K
Sbjct: 404 YARSNNLDEAFK 415



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 215/455 (47%), Gaps = 24/455 (5%)

Query: 14   SGYVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
            SG     NLAT    F   VD++ V SW  +I   ++     EA + F  +R   G  P 
Sbjct: 1959 SGREDHSNLAT---WFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK-LGLIPT 2014

Query: 73   YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
              +F   +  CS           H     FG+ + L + ++L+D Y K   L  AR +F 
Sbjct: 2015 RSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFD 2074

Query: 133  EMPQKDSVSFNALITGFAKEGLNEEAIKLF-------VEMQHLGFKPSD-FTFAAALSAG 184
            E+P ++ VS+ ++ITG+ +    + A+ LF        E++     P D     + LSA 
Sbjct: 2075 EIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 2134

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              ++   +   VH FVVK  F  ++ V N L+D Y+K    + ++K+F  M E D +S+N
Sbjct: 2135 SRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWN 2194

Query: 245  VMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MI  YA +    E+L++F  + +      +    S +L   A+   L+ G+ IH Q I 
Sbjct: 2195 SMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK 2254

Query: 304  TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                  V V  S++DMY KCGR E AK+ F  +   +   WTAM++ Y   G  +EAL++
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 2314

Query: 364  FIEMCRANISADQATFASILRASAELASLSLGKQL-----HSFVIRSGFMSNVFSGSALL 418
            F +M RA +  +  TF S+L A +    +  G        H + I  G    +     ++
Sbjct: 2315 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPG----IEHYGCMV 2370

Query: 419  DMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
            D++ ++G L +A    K M  + + V W +L+ AC
Sbjct: 2371 DLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 2405



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 181/391 (46%), Gaps = 35/391 (8%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL  C        L Q+HA II+ G ++  ++   L+  Y     +  A  +F ++    
Sbjct: 33  LLQNCK---NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           + ++N +I      GL+E+A+ L+  M   G     FTF   + A      I LG+ VH 
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 199 FVVKTNFVENVFVANALLDLYSK--H---------------------------DC--VVE 227
            ++K  F  +VFV N L+D Y K  H                            C  + E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR++F E+P  + VS+  MI  Y  N+Q +E+L+LF+ +Q      +++   +L+     
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L +GR IH   I       V +  +L+DMY+KCG  ++A E+F  +   S   W +M
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-G 406
           I++    G  +EALNLF EM R N+  D  TF  +L A   + ++  G    + + +  G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYG 389

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
                     + ++YA+S +L +A ++ KE+
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 173/352 (49%), Gaps = 10/352 (2%)

Query: 9    TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT--- 65
            ++ LI  Y K G L  AR LF+ +  R  VSWT +I GY Q  Q   A  LF D      
Sbjct: 2053 SSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 2112

Query: 66   ---DGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
               DG + P D V   ++LS CS          VH  ++K G++  + + N+L+D+Y K 
Sbjct: 2113 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC 2172

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAA 180
                ++++VF  M +KD +S+N++I  +A+ GL+ EA+++F  M +H+G + +  T +A 
Sbjct: 2173 GQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAV 2232

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
            L A      +  G+ +H  V+K +   NV V  +++D+Y K   V  A+K F  M E + 
Sbjct: 2233 LLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNV 2292

Query: 241  VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
             S+  M+  Y  + + KE+L +F ++       +   F ++L+  ++   ++ G      
Sbjct: 2293 KSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNA 2352

Query: 301  TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
                  I   ++    +VD++ + G   EA  +   +      V W +++ A
Sbjct: 2353 MKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 33/353 (9%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           T  LI  Y   G +A A  LF  + +    +W ++I   +      +A  L+ +M   G 
Sbjct: 62  TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK-------- 120
           +  D  TF  ++  C+   + +    VH  +IK+G++  + + N+L+D Y K        
Sbjct: 122 A-ADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180

Query: 121 ---------------------IRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
                                I C DL  ARR+F E+P K+ VS+ A+I G+ +    EE
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A++LF  MQ     P+++T  + + A   +  + LGR +H + +K      V++  AL+D
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   + +A ++F  MP     ++N MIT    +   +E+L LF E++          
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV-KVANSLVDMYAKCGRFEEA 329
           F  +L    +  +++ G    T+      I+ + +    + ++YA+    +EA
Sbjct: 361 FIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 39/326 (11%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQIH + I +   ++  +   L+ +Y+  GR   A  +F  + +  T  W  +I A    
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  E+AL L+  M    I+AD+ TF  +++A     S+ LGK +H  +I+ GF  +VF  
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM------ 468
           + L+D Y K G  + A++ F++M  RN+VSW  +IS     GD Q   + F+++      
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 469 ----VQSGYQ---------------------PDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
               + +GY                      P+  +++S++ AC+  G++  G +  +  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG-RGIHDY 282

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             K  +        +++D+  + G   +A ++   MP       W+S+I S  +H     
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHG---L 338

Query: 564 AKKAADQLFKMEKLR---DAAPYVAM 586
            ++A +   +ME++    DA  ++ +
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGV 364



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 1/193 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N VS   +ISG +  G+L  AR +F+ +  +  VSWT +I GY +  Q  EA +LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +    P+  T  +L+  C+E         +H   IK      + +  +L+D Y K
Sbjct: 246 KRMQAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSK 304

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A  VF+ MP+K   ++N++IT     GL +EA+ LF EM+ +  KP   TF   
Sbjct: 305 CGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364

Query: 181 LSAGVGLADIALG 193
           L A V + ++  G
Sbjct: 365 LCACVHIKNVKEG 377


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/659 (36%), Positives = 382/659 (57%), Gaps = 2/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L Q++A ++  G      +   LV+    I  +  AR++F + P  D   +NA++  ++
Sbjct: 90  HLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYS 149

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G    AI+++  MQ     P  F+F   L A   L  + +GR+VH  + +  F  +VF
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N L+ LY+K   +V A  +FG + +   VS+  +I+ YA N Q  E+L++F E++ T 
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                    ++L    +  DL+ G+ IH   I      E  +  SL  +YAKCG    A+
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  + + S + W AMIS YV+ G  EEA+ LF  M   NI  D  T  S + A A++ 
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL L + +  ++  S F ++V   ++L+D YAK GS+  A   F  +P++++V W+A++ 
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               +G  + ++  F  M Q+G  P+ V+ + +L+AC + GL+EEG   F+ M + Y + 
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIE 508

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ +HYA +VD+L R+G  D A   +  MP EP   +W +++++C+IH+++   + AA++
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF ++   +   YV +SN+YA +  W+ V++V+  MRE+G+ K   YS +E+  K+  F 
Sbjct: 569 LFSLDPY-NTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQ 627

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           A D+ HP++ EI  ++E+L + +K+ G+ P T   LHD + E   E+L  HSERLAIA+ 
Sbjct: 628 AGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYG 687

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+TP G+ + + KNLRAC +CHAAIKLISK+  REI VRD+ RFHHFKDG CSC D+W
Sbjct: 688 LISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 202/434 (46%), Gaps = 2/434 (0%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G ++ AR+LF+   D     W  ++  YS+   F  A +++  M+    S PD  +F  +
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVS-PDGFSFPCV 179

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  CS         +VH  I + G+ S + + N LV  Y K   +  A  VF  +  +  
Sbjct: 180 LKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTI 239

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+ ++I+G+A+ G   EA+++F EM+    +P      + L A   + D+  G+ +H  
Sbjct: 240 VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           V+K        +  +L  LY+K   V+ AR  F ++     + +N MI+ Y  N   +E+
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEA 359

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           ++LFR ++           ++ ++  A    L++ R +     ++   ++V V  SL+D 
Sbjct: 360 IELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDT 419

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           YAKCG  + A+ +F  +     V W+AM+  Y   G   E++ LF  M +A +S +  TF
Sbjct: 420 YAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTF 479

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP- 438
             +L A      +  G  L   +   G        + ++D+  ++G L  A      MP 
Sbjct: 480 VGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPI 539

Query: 439 ERNIVSWNALISAC 452
           E  +  W AL+SAC
Sbjct: 540 EPGVSVWGALLSAC 553



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 164/342 (47%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G +  A  +F  +VDRT VSWT +I GY+Q  Q  EA ++F +MR     
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKT-NV 270

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD++   ++L   ++ +       +H  +IK G      +  SL   Y K   + +AR 
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F ++     + +NA+I+G+ K G  EEAI+LF  M+    +P   T  ++++A   +  
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + L R +  ++  + F  +V V  +L+D Y+K   V  AR +F  +P+ D V ++ M+  
Sbjct: 391 LELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVG 450

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + Q +ES+ LF  ++      +   F  LL+   N   ++ G  +  +         
Sbjct: 451 YGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPR 510

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
            +    +VD+  + G  + A     N+     V  W A++SA
Sbjct: 511 HQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 3/146 (2%)

Query: 4   QNTVSTNM-LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +N V  N  LI  Y K G++  AR +F+ + D+  V W+ ++ GY    Q RE+  LF  
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHA 466

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G S P+ VTF  LL+ C       E   +   +  +G          +VD   +  
Sbjct: 467 MRQAGVS-PNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAG 525

Query: 123 CLDLARRVFKEMPQKDSVS-FNALIT 147
            LD A      MP +  VS + AL++
Sbjct: 526 HLDRAYNFVMNMPIEPGVSVWGALLS 551


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 367/595 (61%), Gaps = 4/595 (0%)

Query: 157 EAIKLF--VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           EA++LF  +E++H GF     T+ A +SA VGL  I   ++V  ++V + F  +++V N 
Sbjct: 98  EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L ++ K   +++ARKLF EMPE D  S+  MI  +  +  + E+  LF  +     D  
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              F+T++   A    +Q+GRQIH+  +      +  V+ +L+DMY+KCG  E+A  +F 
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFD 277

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   +TV W ++I++Y   G  EEAL+ + EM  +    D  T + ++R  A LASL  
Sbjct: 278 QMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEY 337

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            KQ H+ ++R G+ +++ + +AL+D Y+K G ++DA   F  M  +N++SWNALI+    
Sbjct: 338 AKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGN 397

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G  +  ++ FE M++ G  P+ V+ L+VLSACS+ GL E G + F SM++ +K++P+  
Sbjct: 398 HGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 457

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HYA MV++L R G  DEA +L+   PF+P   MW++++ +CR+H+NLE  K AA+ L+ M
Sbjct: 458 HYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGM 517

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           E       Y+ + N+Y  +G+ +  + V + ++ +G+R + A +W+E+K + + F   D+
Sbjct: 518 EP-EKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDK 576

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            H QT EI  K+ N+M E+ + GY  +    L D DEE +   LKYHSE+LAIAF LINT
Sbjct: 577 SHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEE-EQRILKYHSEKLAIAFGLINT 635

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P  +P+ + +  R C DCH+AIK I+ +TGREI VRD+SRFHHF+DG CSC D+W
Sbjct: 636 PHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 233/480 (48%), Gaps = 16/480 (3%)

Query: 51  NQFREAFKLF--VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           N++REA +LF  +++  DG  D    T+  L+S C    +   + +V   ++  G+   L
Sbjct: 94  NRYREAMELFEILELEHDG-FDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDL 152

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            + N ++  + K   +  AR++F EMP+KD  S+  +I GF   G   EA  LF+ M   
Sbjct: 153 YVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEE 212

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
                  TF   + A  GL  + +GRQ+H+  +K    ++ FV+ AL+D+YSK   + +A
Sbjct: 213 FNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDA 272

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
             +F +MPE   V +N +I  YA +   +E+L  + E++ +      F  S ++ + A  
Sbjct: 273 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARL 332

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L+  +Q H   +     +++    +LVD Y+K GR E+A  +F  +   + + W A+I
Sbjct: 333 ASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALI 392

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGF 407
           + Y   G  EEA+ +F +M R  +  +  TF ++L A +       G ++ +S       
Sbjct: 393 AGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 452

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFE 466
                  + ++++  + G L +A +  +  P +   + W  L++AC  + + +    + E
Sbjct: 453 KPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAE 512

Query: 467 DMVQSGYQPDSV-SLLSVLSACSHCGLIEEGLQYFNSMTQK-YKLRP-------KKEHYA 517
           ++   G +P+ + + + +L+  +  G ++E      ++ +K  ++ P       KK+ YA
Sbjct: 513 NLY--GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYA 570



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 3/351 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR+LF+ M ++   SW  +IGG+     F EAF LF+ M  +  +
Sbjct: 156 NRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEF-N 214

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D    TF T++   +         Q+H+  +K G      +  +L+D Y K   ++ A  
Sbjct: 215 DGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHC 274

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +MP+K +V +N++I  +A  G +EEA+  + EM+  G K   FT +  +     LA 
Sbjct: 275 VFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLAS 334

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +Q HA +V+  +  ++    AL+D YSK   + +A  +F  M   + +S+N +I  
Sbjct: 335 LEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAG 394

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + Q +E++++F ++       +   F  +LS  +     + G +I         +  
Sbjct: 395 YGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 454

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
             +  + +V++  + G  +EA E+  +     T   W  +++A     NLE
Sbjct: 455 RAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLE 505



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 73/334 (21%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V+   L+  Y K G +  A  +FN M  +  +SW  LI GY    Q  EA ++F  
Sbjct: 351 DTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQ 410

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G  P++VTF  +LS CS    +    ++   + +              D   K R
Sbjct: 411 MLRE-GMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR--------------DHKVKPR 455

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A                 ++    +EGL +EA +L   ++   FKP+   +A  L+
Sbjct: 456 AMHYA----------------CMVELLGREGLLDEAYEL---IRSAPFKPTTNMWATLLT 496

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A     ++ LG+                               + A  L+G  PE    +
Sbjct: 497 ACRMHENLELGK-------------------------------LAAENLYGMEPE-KLCN 524

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           Y V++  Y  + + KE+  + + L+  R      P  T + V         G + H+Q  
Sbjct: 525 YIVLLNLYNSSGKLKEAAGVLQTLK--RKGLRMLPACTWIEVKKQSYAFLCGDKSHSQ-- 580

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            T  I E KV N +V++ ++ G  EE K +  ++
Sbjct: 581 -TKEIYE-KVNNMMVEI-SRHGYVEENKALLPDV 611


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/658 (35%), Positives = 376/658 (57%), Gaps = 4/658 (0%)

Query: 95  VHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           VHA I+K         + N L++ Y K+   + AR V +  P ++ VS+ +L++G A+ G
Sbjct: 28  VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNG 87

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               A+  F EM+  G  P+DFTF     A   L     G+Q+HA  VK   + +VFV  
Sbjct: 88  HFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +  D+Y K     +ARKLF E+PE +  ++N  I+    + + KE+++ F E +      
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQP 207

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +   F   L+  ++ L L +G Q+H     +   ++V V N L+D Y KC +   ++ IF
Sbjct: 208 NSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIF 267

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           A +   + V W ++++AYVQ    E+A  L++   +  +       +S+L A A +A L 
Sbjct: 268 AEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLE 327

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LG+ +H+  +++    N+F GSAL+DMY K G ++D+ Q F EMPE+N+V+ N+LI   A
Sbjct: 328 LGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYA 387

Query: 454 QNGDAQATLKSFEDMVQSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
             G     L  FEDM   G    P+ ++ +S+LSACS  G +E G++ F+SM   Y + P
Sbjct: 388 HQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEP 447

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
             EHY+ +VD+L R+G  ++A + + +MP +P   +W ++ N+CR+H        AA+ L
Sbjct: 448 GAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENL 507

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           FK++  +D+  +V +SN +A AG+W   + V++ M+  G++K   YSW+ +K++VH F A
Sbjct: 508 FKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQA 566

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D  H    EI+  +  L  +M+  GYKPD   +L+D +EE K   + +HSE+LA+AF L
Sbjct: 567 KDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGL 626

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  P   PI + KNLR C DCH+  K +S    REI VRD++RFH FKDG CSC+D+W
Sbjct: 627 VALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 230/465 (49%), Gaps = 5/465 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K  +  +AR +      R  VSWT L+ G +Q   F  A   F +MR +G +
Sbjct: 46  NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVA 105

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D+ TF  +    +         Q+HA  +K G    + +  S  D YCK R  D AR+
Sbjct: 106 PNDF-TFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E+P+++  ++NA I+    +G  +EAI+ F+E + +G +P+  TF   L+A      
Sbjct: 165 LFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLL 224

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG Q+H  V ++ F  +V V N L+D Y K   +  +  +F EM   + VS+  ++  
Sbjct: 225 LDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAA 284

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N + +++  L+   +    + S F  S++LS  A    L++GR IH   +       
Sbjct: 285 YVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERN 344

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V ++LVDMY KCG  E++++ F  +   + V   ++I  Y  +G ++ AL LF +M  
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAP 404

Query: 370 ANI--SADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
                + +  TF S+L A +   ++  G K   S     G        S ++DM  ++G 
Sbjct: 405 RGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGM 464

Query: 427 LKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ 470
           ++ A +  K+MP +  +S W AL +AC  +G     + + E++ +
Sbjct: 465 VEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFK 509



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 190/379 (50%), Gaps = 11/379 (2%)

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L   +  + + LGR VHA +VKT +     F+AN L+++YSK D    AR +    P  +
Sbjct: 13  LKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+  +++  A N  +  +L  F E++      + F F  +   VA+      G+QIH 
Sbjct: 73  VVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHA 132

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +    I +V V  S  DMY K    ++A+++F  +   +   W A IS  V  G  +E
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKE 192

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+  FIE  R     +  TF   L A ++   L LG Q+H  V RSGF ++V   + L+D
Sbjct: 193 AIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLID 252

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG-DAQAT---LKSFEDMVQSGYQP 475
            Y K   ++ +   F EM  +N VSW +L++A  QN  D +A+   L+S +++V++    
Sbjct: 253 FYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVET---- 308

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
               + SVLSAC+    +E G +  ++   K  +       +++VD+  + GC +++E+ 
Sbjct: 309 SDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQA 367

Query: 536 MAQMPFEPDEIMWSSVINS 554
             +MP E + +  +S+I  
Sbjct: 368 FDEMP-EKNLVTLNSLIGG 385



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 32/228 (14%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    + L+  Y K G +  + + F+ M ++  V+   LIGGY+ + Q   A  LF DM
Sbjct: 343 RNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDM 402

Query: 64  RTDG-GSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCK 120
              G G  P+Y+TF +LLS CS        +++  D +K  +G        + +VD   +
Sbjct: 403 APRGCGPAPNYMTFVSLLSACSRAGAVENGMKIF-DSMKSTYGIEPGAEHYSCIVDMLGR 461

Query: 121 IRCLDLARRVFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF---- 175
              ++ A    K+MP K ++S + AL       G  +  + +          P D     
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG--KPHLGILAAENLFKLDPKDSGNHV 519

Query: 176 ----TFAAA-----------------LSAGVGLADIALGRQVHAFVVK 202
               TFAAA                 +  G G + I +  QVHAF  K
Sbjct: 520 LLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAK 567


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/658 (37%), Positives = 375/658 (56%), Gaps = 40/658 (6%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA ++  G    + I   LV+ Y  +  + L+R  F ++PQKD  ++N++I+ +   G 
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97

Query: 155 NEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             EAI  F ++  +   +P  +TF   L A   L D   GR++H +  K  F  NVFVA 
Sbjct: 98  FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 154

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+ +YS+      AR LF +MP  D  S+N MI+    N    ++L +  E+   R + 
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM---RLEG 211

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +  F T++S++                               VDMYAK G  + A ++F
Sbjct: 212 IKMNFVTVVSILP----------------------------VFVDMYAKLGLLDSAHKVF 243

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLF--IEMCRANISADQATFASILRASAELAS 391
             +     + W  +I+ Y Q G   EA+ ++  +E C+  I  +Q T+ SIL A A + +
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK-EIIPNQGTWVSILPAYAHVGA 302

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L  G ++H  VI++    +VF  + L+D+Y K G L DA+  F ++P+ + V+WNA+IS 
Sbjct: 303 LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 362

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
              +G A+ TLK F +M+  G +PD V+ +S+LSACSH G +EEG   F  M Q+Y ++P
Sbjct: 363 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKP 421

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
             +HY  MVD+L R+G  + A   +  MP +PD  +W +++ +CRIH N+E  K A+D+L
Sbjct: 422 SLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRL 481

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           F+++  ++   YV +SNIYA  G+WE V +V+   RERG++K   +S +E+  KV VF  
Sbjct: 482 FEVDS-KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYT 540

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            ++ HP+  EI  ++  L  +MK  GY PD S  L D +E+ K   L  HSERLAIAF +
Sbjct: 541 GNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGI 600

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I+TP  SPI + KNLR C DCH A K IS+IT REI VRDS+RFHHFKDG CSC D+W
Sbjct: 601 ISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 214/458 (46%), Gaps = 36/458 (7%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+   +  L++ Y   G+++ +R  F+ +  +   +W  +I  Y     F EA   F  +
Sbjct: 49  QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQL 108

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  PD+ TF  +L  C    T  +  ++H    K G+   + +  SL+  Y +   
Sbjct: 109 LLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 165

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +AR +F +MP +D  S+NA+I+G  + G   +A+ +  EM+  G              
Sbjct: 166 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG-------------- 211

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                            +K NFV  V +    +D+Y+K   +  A K+F  +P  D +S+
Sbjct: 212 -----------------IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISW 254

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N +IT YA N    E++++++ ++  +    +Q  + ++L   A+   LQ G +IH + I
Sbjct: 255 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVI 314

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T    +V VA  L+D+Y KCGR  +A  +F  +   S+V W A+IS +   G+ E+ L 
Sbjct: 315 KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLK 374

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF EM    +  D  TF S+L A +    +  GK     +   G   ++     ++D+  
Sbjct: 375 LFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLG 434

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           ++G L+ A    K+MP +   S W AL+ AC  +G+ +
Sbjct: 435 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 26/222 (11%)

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             K LH+ ++ +G + ++F  + L+++YA  G +  +  TF ++P++++ +WN++ISA  
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 454 QNGDAQATLKSF-EDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQYFNSMT 504
            NG     +  F + ++ S  +PD  +   VL AC         HC   + G Q+ N   
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQW-NVFV 152

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
                       AS++ +  R G    A  L   MPF  D   W+++I+    + N   A
Sbjct: 153 A-----------ASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQA 200

Query: 565 KKAADQL----FKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
               D++     KM  +   +      ++YA  G  +S  +V
Sbjct: 201 LDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKV 242


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/752 (35%), Positives = 394/752 (52%), Gaps = 94/752 (12%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD  T A L      P  A  L+  +A            +   L DS      + +ARR 
Sbjct: 74  PDLATPAVLFRADPGPVAATSLVSAYA------------VAGRLRDSAAFFDSVPVARR- 120

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGLA 188
                  D+V  NA+I+ FA+  L   A+ +F  +       +P D++F + LSA   + 
Sbjct: 121 -------DTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMH 173

Query: 189 DIALGR--QVHAFVVKTNFVENVFVANALLDLYSKHDC---VVEARKLFGEMPE------ 237
           D+A+    Q+H  V K      + V+NAL+ LY K D      +ARK+  EMPE      
Sbjct: 174 DLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTW 233

Query: 238 ----------------------VDG---VSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
                                 +DG   V +N MI+ Y  +    E+ +LFR +   R  
Sbjct: 234 TTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIP 293

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT----TAISEVKVANSLVDMYAKCGR--- 325
             +F F++LLS  AN      G+ +H Q I         + + V N+LV +Y+K G+   
Sbjct: 294 PDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAV 353

Query: 326 ----------------------------FEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
                                        + A  IF  + + S + W  M+S YV  G  
Sbjct: 354 ATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLA 413

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E+AL LF +M   ++     T+A  + A  EL +L  GKQLH+ +++ GF ++  +G+AL
Sbjct: 414 EDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNAL 473

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L MYA+ G++KDA   F  MP  + VSWNA+ISA  Q+G  +  L+ F+ MV  G  PD 
Sbjct: 474 LTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDR 533

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           +S L++L+AC+H GL+++G QYF SM + + + P ++HYA ++D+L R+G   EA  L+ 
Sbjct: 534 ISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIK 593

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
            MPFEP   +W ++++ CRI+ ++E    AADQLFKM    D   Y+ +SN Y+ AG+W 
Sbjct: 594 TMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGT-YILLSNTYSAAGRWV 652

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
             ++V+K MR+RGV+K    SW+E+ +KVHVF   D  HP  +E+ R +E +  +M+K G
Sbjct: 653 DAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLG 712

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y PDT  AL D     K   L  HSERLA++F L+  P G+ + V+KNL+ C DCH A+ 
Sbjct: 713 YVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMM 772

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +S+  GREI VRD  RFHHFKDG CSC ++W
Sbjct: 773 FMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 194/395 (49%), Gaps = 38/395 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++   ++ G+V+ G++  AR  F  +     V W  +I GY Q     EAF+LF
Sbjct: 225 MPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELF 284

Query: 61  VDMRTDGGSDPDYVTFATLLSGCS------------------EPD--------TANELIQ 94
             M +     PD  TF +LLS C+                  +PD          N L+ 
Sbjct: 285 RRMVSK-RIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVT 343

Query: 95  VHADIIKFG-----YNSI----LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           +++   K       ++S+    ++  N+++  Y +  CLD A R+FKEMP K  +S+  +
Sbjct: 344 LYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVM 403

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++G+   GL E+A+KLF +M+    KP D+T+A A++A   L  +  G+Q+HA +V+  F
Sbjct: 404 VSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGF 463

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +    NALL +Y++   V +AR +F  MP VD VS+N MI+    +   +E+L+LF +
Sbjct: 464 EASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQ 523

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCG 324
           +        +  F T+L+   +   +  G Q          IS  +   + L+D+  + G
Sbjct: 524 MVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAG 583

Query: 325 RFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           R  EA+++   +    T   W A++S     G++E
Sbjct: 584 RIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME 618


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 412/739 (55%), Gaps = 7/739 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           ++  G LA AR++F+ +    A ++  LI  YS    F  A  L+  M     + P+  T
Sbjct: 44  HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVA-PNKYT 102

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  +L  CS          +HA     G ++ L +  +L+D Y +      AR VF +MP
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGR 194
            +D V++NA++ G+A  G+   AI   ++MQ H G +P+  T  + L        +  G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 195 QVHAFVVKTNFVEN---VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            +HA+ ++    +N   V +  ALLD+Y+K   +V A ++F  MP  + V+++ +I  + 
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 252 WNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             ++  E+  LF+++        S    ++ L V A+  DL +G Q+H     +   +++
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             +NSL+ MYAK G   EA   F  ++   T+ + A++S  VQ G  EEA  +F +M   
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N+  D AT  S++ A + LA+L  GK  H  VI  G        ++L+DMYAK G +  +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            Q F +MP R++VSWN +I+    +G  +     F  M   G+ PD V+ + +++ACSH 
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+ EG  +F++MT KY + P+ EHY  MVD+L R G  DEA + +  MP + D  +W +
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CRIHKN++  K+ +  + K+        +V +SNI++ AG+++  ++V+   + +G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGP-EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKG 641

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            +K   YSW+E+   +H F   D+ HP + +I  +++N+M ++KK GY+ DTS  L D +
Sbjct: 642 FKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLE 701

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K ++L YHSE+LAIAF +++  E   I V KNLR C DCH AIK ++ +  R I VR
Sbjct: 702 EEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVR 761

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFHHFK+G CSC +FW
Sbjct: 762 DTNRFHHFKNGQCSCGNFW 780



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 221/451 (49%), Gaps = 8/451 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  LI  Y++      AR +F  M  R  V+W  ++ GY+    +  A    +DM+  GG
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS---ILIICNSLVDSYCKIRCLD 125
             P+  T  +LL   ++     +   +HA  ++         ++I  +L+D Y K + L 
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSA 183
            A RVF  MP ++ V+++ALI GF       EA  LF +M  + L F  S  + A+AL  
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL-SATSVASALRV 316

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LAD+ +G Q+HA + K+    ++  +N+LL +Y+K   + EA   F E+   D +SY
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +++    N + +E+  +F+++Q    +       +L+   ++   LQ G+  H   I+
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                E  + NSL+DMYAKCG+ + ++++F  +     V W  MI+ Y   G  +EA  L
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYA 422
           F+ M     + D  TF  ++ A +    ++ GK    +   + G +  +     ++D+ A
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLA 556

Query: 423 KSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           + G L +A Q  + MP + ++  W AL+ AC
Sbjct: 557 RGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 210/494 (42%), Gaps = 60/494 (12%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K   L  A  +F+ M  R  V+W+ LIGG+   ++  EAF LF DM  +G    
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL 305

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              + A+ L  C+     +   Q+HA I K G ++ L   NSL+  Y K   ++ A   F
Sbjct: 306 SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFF 365

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+  KD++S+ AL++G  + G  EEA  +F +MQ    +P   T  + + A   LA + 
Sbjct: 366 DEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQ 425

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+  H  V+         + N+L+D+Y+K   +  +R++F +MP  D VS+N MI  Y 
Sbjct: 426 HGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG 485

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +   KE+  LF  ++   F      F  L++  ++                        
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS----------------------- 522

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH-ISTVP----WTAMISAYVQKGNLEEALNLFIE 366
                       G   E K  F  ++H    +P    +  M+    + G L+EA      
Sbjct: 523 ------------GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--------FMSNVFSGSALL 418
           M    + AD   + ++L A     ++ LGKQ+   + + G         +SN+FS +   
Sbjct: 571 M---PLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE--------DMVQ 470
           D  A+   ++  ++ FK+ P  + +  N  + A      +    +           D+ +
Sbjct: 628 DEAAEVRIIQK-VKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686

Query: 471 SGYQPDSVSLLSVL 484
            GYQ D+  +L  L
Sbjct: 687 LGYQADTSFVLQDL 700



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +  ++N L+S Y K+G +  A   F+ +  +  +S+  L+ G  Q  +  EAF +F  M+
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                +PD  T  +L+  CS           H  +I  G      ICNSL+D Y K   +
Sbjct: 401 A-CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           DL+R+VF +MP +D VS+N +I G+   GL +EA  LF+ M++ GF P D TF   ++A
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/580 (40%), Positives = 353/580 (60%), Gaps = 2/580 (0%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
             P+   +A+ L + +    I  G+Q+HA V    F  +  +A  L++LY   D +  AR
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +P+ +   +NV+I  YAWN  Y+ +++L+ ++         F F  +L   A   
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            ++ GR+IH   + T    +V V  +L+DMYAKCG    A+E+F  +     V W +M++
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           AY Q G+ +  L+L  EM    +   +AT  + + ASA+ A+L  G++LH    R  F S
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +    +AL+DMYAK GS++ A   F+ +  + +VSWNA+I+  A +G A   L  FE+M 
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN 370

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           +   +PD ++ + VLSACSH GL+EEG  +F +M + YK+ P  +HY  MVD+L  SG  
Sbjct: 371 RVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRL 429

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           DEA  L+ QM   PD  +W +++NSC+IH N+E  + A ++L ++E   DA  YV +SNI
Sbjct: 430 DEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEP-DDAGNYVILSNI 488

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+WE V++++K M +R ++K  A SW+E+K+KVH F + D  HP ++EI  ++E +
Sbjct: 489 YAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERV 548

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
              MK+ GY P T    HD +++ K   +  HSERLAIAF LI+TP G+ +L+ KNLR C
Sbjct: 549 GGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRIC 608

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIK ISKIT REITVRD +R+HHFKDG CSC D+W
Sbjct: 609 EDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 204/419 (48%), Gaps = 9/419 (2%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P Y  +A+LL  C          Q+HA +   G+    +I   LV+ YC    L  AR +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +P+ +   +N LI G+A  G  E A++L+ +M   G  P +FTF   L A   L+ I
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             GR++H  VV+T + ++VFV  AL+D+Y+K  CV  AR++F ++   D V +N M+  Y
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           + N      L L  E+  T    ++    T +S  A+   L  GR++H  +      S  
Sbjct: 253 SQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD 312

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           KV  +LVDMYAKCG    A+ +F  L     V W AMI+ Y   G+  EAL+LF EM R 
Sbjct: 313 KVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV 372

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKD 429
               D  TF  +L A +    L  G      +IR       V   + ++D+   SG L +
Sbjct: 373 -AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDE 431

Query: 430 A---IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           A   I   K +P+  +  W AL+++C  + + +    + E +++   +PD      +LS
Sbjct: 432 AYNLIMQMKVLPDSGV--WGALLNSCKIHANVELGEIALERLIE--LEPDDAGNYVILS 486



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 7/368 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV    L++ Y    +L++AR LF+ +       W +LI GY+    +  A +L+  M 
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM- 167

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD  TF  +L  C+         ++H  +++ G+   + +  +L+D Y K  C+
Sbjct: 168 FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCV 227

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR VF ++  +D+V +N+++  +++ G  +  + L  EM   G +P++ T   A+SA 
Sbjct: 228 GSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISAS 287

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  GR++H    +  F  +  V  AL+D+Y+K   V  AR LF  +     VS+N
Sbjct: 288 ADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWN 347

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT YA +    E+L LF E+           F  +LS  ++   L+ G       I  
Sbjct: 348 AMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 406

Query: 305 TAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQKGNLEE--- 359
             I   V+    +VD+    GR +EA  +   +  +  +  W A++++     N+E    
Sbjct: 407 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEI 466

Query: 360 ALNLFIEM 367
           AL   IE+
Sbjct: 467 ALERLIEL 474


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/673 (35%), Positives = 386/673 (57%), Gaps = 6/673 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI--RCLDLARRVFKEMPQ 136
           +L  C  P    +L QVHA ++K       II  ++++S   +    +D A  +F  + +
Sbjct: 27  ILQQCKTP---KDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK 83

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
            +S ++N +I G A +   + A+ LF +M     +   FTF++ L A   +  +  G QV
Sbjct: 84  PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           HA ++K+ F  N FV N L+ +Y+    +  AR +F  MPE   V++N M++ Y  N  +
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            E +KLFR++   R +       ++L       +L+IG  I    +         +  SL
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           +DMYAKCG+ + A+++F  +     V W+AMIS Y Q    +EALNLF EM + N+  ++
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T  S+L + A L +   GK +H ++ +      V  G+ L+D YAK G +  +++ FKE
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M  +N+ +W ALI   A NG+ +  L+ F  M+++  +P+ V+ + VLSACSH  L+++G
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
              FNSM + + + P+ EHY  MVDIL R+G  +EA + +  MPF P+ ++W +++ SCR
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
            HKN+E A+K+ + + ++E    +  Y+ +SN YA+ G+ E   +V+  ++E+ ++K+  
Sbjct: 504 AHKNIEMAEKSLEHITRLEPAH-SGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPG 562

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            S +EL   VH F + D  H  + EI   ++ +M+++K+ GY P+T  A  + +EE K  
Sbjct: 563 CSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKET 622

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
           S+ +HSE+LAIA+ LI T   + I + KNLR C DCH A K IS++  R I VRD +RFH
Sbjct: 623 SVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFH 682

Query: 737 HFKDGFCSCRDFW 749
           HFKDG CSC D+W
Sbjct: 683 HFKDGLCSCNDYW 695



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 220/448 (49%), Gaps = 3/448 (0%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  +FN +    + ++ ++I G + K     A  LF  M  +     D  TF+++L  CS
Sbjct: 74  ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMH-EKSVQHDKFTFSSVLKACS 132

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                 E  QVHA I+K G+ S   + N+L+  Y     + +AR VF  MP++  V++N+
Sbjct: 133 RMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNS 192

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +++G+ K GL +E +KLF ++  L  +  D T  + L A   LA++ +G  +  ++V   
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKG 252

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
              N  +  +L+D+Y+K   V  ARKLF EM + D V+++ MI+ YA  ++ KE+L LF 
Sbjct: 253 LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           E+Q      ++    ++L   A     + G+ +H           V +   L+D YAKCG
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG 372

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             + + E+F  +S  +   WTA+I      G  + AL  F  M   ++  +  TF  +L 
Sbjct: 373 YIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432

Query: 385 ASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNI 442
           A +    +  G+ L + + R       +     ++D+  ++G L++A Q    MP   N 
Sbjct: 433 ACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQ 470
           V W  L+++C  + + +   KS E + +
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHITR 520



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 172/365 (47%), Gaps = 17/365 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF---V 61
           N    N LI  Y   G +  AR +F+ M +R+ V+W  ++ GY++   + E  KLF   +
Sbjct: 155 NEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKIL 214

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTAN----ELIQVHADIIKFGYNSILIICNSLVDS 117
           ++R +     D VT  ++L  C     AN    ELI  +  I+  G      +  SL+D 
Sbjct: 215 ELRIEF----DDVTMISVLMACGR--LANLEIGELIGEY--IVSKGLRRNNTLTTSLIDM 266

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   +D AR++F EM ++D V+++A+I+G+A+    +EA+ LF EMQ     P++ T 
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + L +   L     G+ VH ++ K      V +   L+D Y+K   +  + ++F EM  
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            +  ++  +I   A N + K +L+ F  +       +   F  +LS  ++   +  GR +
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446

Query: 298 HTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKG 355
                    I   ++    +VD+  + G  EEA +   N+    + V W  ++++     
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 506

Query: 356 NLEEA 360
           N+E A
Sbjct: 507 NIEMA 511



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 2/234 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N   T  LI  Y K G + TAR+LF+ M  R  V+W+ +I GY+Q ++ +EA  LF +M
Sbjct: 255 RNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEM 314

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G   P+ VT  ++L  C+          VH  I K      + +   L+D Y K   
Sbjct: 315 QK-GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D +  VFKEM  K+  ++ ALI G A  G  + A++ F  M     KP+D TF   LSA
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433

Query: 184 GVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
                 +  GR +   + +   +E  +     ++D+  +   + EA +    MP
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMP 487


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/661 (35%), Positives = 391/661 (59%), Gaps = 4/661 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           +L Q+HA ++  G      +   L+ +      +  AR+VF ++P+     +NA+I G++
Sbjct: 36  QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           +    ++A+ ++ +MQ     P  FTF   L A  GL+ + +GR VHA V +  F  +VF
Sbjct: 96  RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155

Query: 211 VANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           V N L+ LY+K   +  AR +F    +PE   VS+  +++ YA N +  E+L++F +++ 
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                      ++L+      DL+ GR IH   +     +E  +  SL  MYAKCG+   
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVAT 275

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           AK +F  +   + + W AMIS Y + G  ++A++LF EM   ++  D  +  S + A A+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           + SL   + +  +V RS +  +VF  SAL+DM+AK GS++ A   F    +R++V W+A+
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I     +G A+  +  +  M + G  P+ V+ L +L AC+H G++ EG  +FN M   +K
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HK 454

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P+++HYA ++D+L R+G  D+A +++  MP +P   +W +++++C+ H+++E  K AA
Sbjct: 455 INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAA 514

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            QLF ++   +   YV +SN+YA A  W+ V++V+  M+E+G+ K    SWVE++ ++  
Sbjct: 515 QQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEG 573

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ HP+  EI R++E +   +K+ G+  +   +LHD ++E   E+L  HSER+ IA
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIA 633

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           + LI+TP+G+ + + KNLRAC +CHAA KLISK+ GREI VRD++RFHHFKDG CSC D+
Sbjct: 634 YGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDY 693

Query: 749 W 749
           W
Sbjct: 694 W 694



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 214/447 (47%), Gaps = 4/447 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI      G++  AR++F+ +       W  +I GYS+ N F++A  ++  M+    S P
Sbjct: 59  LIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS-P 117

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  LL  C           VHA + + G+ + + + N L+  Y K R L  AR VF
Sbjct: 118 DSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVF 177

Query: 132 K--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +   +P++  VS+ A+++ +A+ G   EA+++F +M+ +  KP      + L+A   L D
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQD 237

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR +HA V+K        +  +L  +Y+K   V  A+ LF +M   + + +N MI+ 
Sbjct: 238 LEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA N   K+++ LF E+            ++ +S  A    L+  R +      +    +
Sbjct: 298 YAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDD 357

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V ++++L+DM+AKCG  E A+ +F        V W+AMI  Y   G   EA++L+  M R
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER 417

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  TF  +L A      +  G    + +            + ++D+  ++G L  
Sbjct: 418 DGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQ 477

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQN 455
           A +  K MP +  +  W AL+SAC ++
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 173/352 (49%), Gaps = 4/352 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N LI+ Y K   L  AR +F  +   +RT VSWT ++  Y+Q  +  EA ++F  MR   
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK-M 216

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              PD V   ++L+  +      +   +HA ++K G  +   +  SL   Y K   +  A
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           + +F +M   + + +NA+I+G+AK G  ++AI LF EM +   +P   +  +A+SA   +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +   R +  +V ++++ ++VF+++AL+D+++K   V  AR +F    + D V ++ MI
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y  + Q +E++ L+R ++      +   F  LL    +   ++ G     +       
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKIN 456

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            + +    ++D+  + G  ++A E+   +        W A++SA  +  ++E
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 2/145 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ LI  + K G++  AR +F+  +DR  V W+ +I GY    Q REA  L+  M  D G
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERD-G 419

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ VTF  LL  C+      E       +     N        ++D   +   LD A 
Sbjct: 420 VHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAY 479

Query: 129 RVFKEMPQKDSVS-FNALITGFAKE 152
            V K MP +  V+ + AL++   K 
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKH 504


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/642 (36%), Positives = 379/642 (59%), Gaps = 5/642 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GF 170
           NSLV  Y K   L LAR +F  MP ++ VS+N L+ G+   G + E + LF  M  L   
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            P+++ F  ALSA      +  G Q H  + K   V + +V +AL+ +YS+   V  A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 231 LFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           +   +P     D  SYN ++     + + +E++++ R +           +  ++ + A 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             DLQ+G ++H + +    + +  V + L+DMY KCG    A+ +F  L + + V WTA+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           ++AY+Q G  EE+LNLF  M R     ++ TFA +L A A +A+L  G  LH+ V + GF
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
            ++V   +AL++MY+KSGS+  +   F +M  R+I++WNA+I   + +G  +  L+ F+D
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           MV +   P+ V+ + VLSA SH GL++EG  Y N + + +K+ P  EHY  MV +L R+G
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAG 473

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             DEAE  M     + D + W +++N+C +H+N +  ++ A+ + +M+   D   Y  +S
Sbjct: 474 LLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDP-HDVGTYTLLS 532

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
           N+YA A +W+ V  ++K MRER ++K    SW+++++ +HVF +    HP++ +I +K++
Sbjct: 533 NMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQ 592

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            L+  +K  GY P+ +  LHD ++E K   L YHSE+LA+A+ L+  P  +PI ++KNLR
Sbjct: 593 QLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLR 652

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            C DCH A+KLISK+T R I VRD++RFHHF+DG C+C D W
Sbjct: 653 MCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 245/522 (46%), Gaps = 17/522 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  YVK G L  AR LF++M  R  VSW +L+ GY       E   LF +M +   +
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+   F T LS CS      E +Q H  + KFG      + ++LV  Y +   ++LA +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 130 VFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           V   +P +   D  S+N+++    + G  EEA+++   M          T+   +     
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           + D+ LG +VHA +++   + + FV + L+D+Y K   V+ AR +F  +   + V +  +
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +T Y  N  ++ESL LF  +       +++ F+ LL+  A    L+ G  +H +      
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            + V V N+L++MY+K G  + +  +F ++ +   + W AMI  Y   G  ++AL +F +
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 367 MCRANISADQATFASILRASAELASLS-----LGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           M  A    +  TF  +L A + L  +      L   + +F I  G        + ++ + 
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHY----TCMVALL 469

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           +++G L +A    K    + ++V+W  L++AC  + +     +  E ++Q    P  V  
Sbjct: 470 SRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQM--DPHDVGT 527

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
            ++LS         +G+     + ++  +  KKE  AS +DI
Sbjct: 528 YTLLSNMYAKARRWDGVVTIRKLMRERNI--KKEPGASWLDI 567



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 7/238 (2%)

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV---TTAISEVKVANSLVDMYAKCG 324
           F+R+  S      LL + A+   L  G+ +H Q ++   T+  S +   NSLV +Y KCG
Sbjct: 5   FSRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCG 64

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASIL 383
           +   A+ +F  +   + V W  +++ Y+  GN  E L LF  M    N   ++  F + L
Sbjct: 65  QLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTAL 124

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER--- 440
            A +    +  G Q H  + + G + + +  SAL+ MY++   ++ A+Q    +P     
Sbjct: 125 SACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVN 184

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +I S+N++++A  ++G  +  ++    MV      D V+ + V+  C+    ++ GL+
Sbjct: 185 DIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLR 242



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 44/273 (16%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + +  N LI+ Y KSG++ ++  +F  M+ R  ++W  +I GYS     ++A ++F DM
Sbjct: 355 NHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDM 414

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  P+YVTF  +LS  S           H  ++K G+  +    N L+        
Sbjct: 415 -VSAEECPNYVTFIGVLSAYS-----------HLGLVKEGFYYL----NHLM-------- 450

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
                R FK  P  +   +  ++   ++ GL +EA       Q    K     +   L+A
Sbjct: 451 -----RNFKIEPGLE--HYTCMVALLSRAGLLDEAENFMKTTQ---VKWDVVAWRTLLNA 500

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGE--MPEV 238
                +  LGR++   V++ +   +V     L ++Y+K    D VV  RKL  E  + + 
Sbjct: 501 CHVHRNYDLGRRIAESVLQMD-PHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKE 559

Query: 239 DGVSY----NVMITCYAWNEQYKESLKLFRELQ 267
            G S+    N +    +    + ES+++++++Q
Sbjct: 560 PGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQ 592


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/690 (36%), Positives = 400/690 (57%), Gaps = 17/690 (2%)

Query: 71  PDYVT---FATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDL 126
           PD  T    A+LL  C           +HA ++  G  +    + N L+  Y    C DL
Sbjct: 15  PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS--HCADL 72

Query: 127 AR--RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           A   R+F  MP++++VS+  L++G ++  ++ +A+  F  M+  G  P+ F  ++A  A 
Sbjct: 73  ASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAA 132

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L     G Q+H   V+  F   +FVA+ L D+YSK   + EA ++F +MP+ D V++ 
Sbjct: 133 AALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWT 192

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRF-DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  YA N   + ++  FR+++        Q  F ++LS      D  + + IH     
Sbjct: 193 AMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTK 252

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVPWTAMISAYVQKGNLEEALN 362
                EV V N+L+DMYAK    E A  +   +    + V  T+MI  Y++   +EEAL 
Sbjct: 253 AGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALV 312

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           +++E+ R  +  ++ TF+S+++  A  A L  G QLH+ VI++  + + F GS L+DMY 
Sbjct: 313 IYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYG 372

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G +  ++Q F E+  R  ++WNA+I+  AQ+G  +  +++F+ M+ SG +P+ ++ +S
Sbjct: 373 KCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVS 432

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L+ACSH GL++EGL+YF SM + + + PK+EHY+ ++D   R+G  DEA K +++MP +
Sbjct: 433 LLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIK 492

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P+   W S++ +CR+  + E  + AA  L K+E   +   +V++S IYA  GQWE V  V
Sbjct: 493 PNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEP-GNTGIHVSLSGIYASLGQWEDVKAV 551

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR+  ++K+  +SWV+   K HVF + D  HPQ  +I  K+E L   +K+EGY PDT
Sbjct: 552 RKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDT 611

Query: 663 S---CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           S   C L D  +E     L+YHSER+A+AFALI+ P   PI+V KNLR C DCH A K I
Sbjct: 612 SFLPCNLEDIAKE---RILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFI 668

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            K+  R+I VRD+SRFHHF +G CSC D+W
Sbjct: 669 CKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 231/463 (49%), Gaps = 13/463 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N LI+ Y    +LA+A  LF +M  R AVSWT L+ G SQ     +A   F  MR
Sbjct: 55  STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 114

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P     ++     +         Q+H   ++ G+++ L + ++L D Y K   L
Sbjct: 115 R-AGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLL 173

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSA 183
             A RVF +MPQKD+V++ A+I G+AK G  E A+  F +M+  G   +D   F + LSA
Sbjct: 174 SEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA 233

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
             GL D  L + +H  V K  F   V V NAL+D+Y+K   V  A ++     ++D   +
Sbjct: 234 SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL----KIDPGGW 289

Query: 244 NV-----MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           NV     MI  Y   +  +E+L ++ EL+    + ++F FS+++   A +  L+ G Q+H
Sbjct: 290 NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLH 349

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            Q I T  I +  V ++LVDMY KCG    + ++F  + + + + W A+I+ + Q G+  
Sbjct: 350 AQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGR 409

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
           EA+  F  M  + I  +   F S+L A +    +  G K  +S     G        S +
Sbjct: 410 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 469

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +D Y ++G L +A +   EMP + N   W +L+ AC   G  +
Sbjct: 470 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 512


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/686 (35%), Positives = 393/686 (57%), Gaps = 33/686 (4%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+H  ++K G+ S  ++ N+L+D Y K   L +A  VF  MP+++ VS+ AL+ GF + G
Sbjct: 25  QLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHG 84

Query: 154 LNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
              E ++L   M+ L    P++FT +A+L A   + D+A G  +H   V+  F  +  VA
Sbjct: 85  DARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVA 144

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N+L+ LYSK   + +AR++F      + V++N MI+ YA     ++SL +FRE+Q  R +
Sbjct: 145 NSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQE 204

Query: 273 R-----SQFPFSTLLSVVANKLDLQIGRQIHTQTIV--TTAISEVKVANSLVDMYAKCG- 324
                  +F F++LL    +    + G Q+H   ++   +  S   +A +L+DMY KC  
Sbjct: 205 EEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRC 264

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
               A ++F  L   + + WT +I  + Q+G ++EA+ LF     + + AD    +S++ 
Sbjct: 265 LLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVG 324

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
             A+ A +  G+Q+H + +++    +V   ++L+DMY K G   +A + F+E+P RN+VS
Sbjct: 325 VFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           W A+I+   ++G  Q  +  FE+M   G +PD V+ L++LSACSH GL+EE  +YF+++ 
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIR 444

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
              +LRP+ EHYA MVD+L R+G   EA+ L+A MP  P   +W +++++CR+HKN+   
Sbjct: 445 HDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVG 504

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           ++A + L  ++   +   YV +SNI+A AG W    +V+ AMR RG+RK    SWVE+  
Sbjct: 505 REAGETLLAIDG-DNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGK 563

Query: 625 KVHVF-TANDELHPQTNEI---RRKIENLMQEMKKEGYKPD-----TSCALHDEDEEIKV 675
           + H F    D+ HP+  +I    R +E  M+E  + GY P      +  ALHD DEE + 
Sbjct: 564 EAHFFYGGGDDSHPRAADICCVLRDVERTMRE--RLGYSPGSSSSSSEAALHDVDEESRA 621

Query: 676 ESLKYHSERLAIAFALI------------NTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
           ESL+ HSERLA+   L+             T     I V KNLR C DCH   K +S + 
Sbjct: 622 ESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVV 681

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GR + VRD++RFH F+DG CSC+D+W
Sbjct: 682 GRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 241/491 (49%), Gaps = 11/491 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  Y K G L  A E+F  M +R  VSWT L+ G+ +    RE  +L   
Sbjct: 36  GSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGA 95

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR+     P+  T +  L  C         + +H   ++ G+    ++ NSLV  Y K  
Sbjct: 96  MRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGG 155

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----GFKPSDFTF 177
            +  ARRVF     ++ V++NA+I+G+A  G   +++ +F EMQ         +P +FTF
Sbjct: 156 RIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTF 215

Query: 178 AAALSAGVGLADIALGRQVHAFVV--KTNFVENVFVANALLDLYSKHDCVVE-ARKLFGE 234
           A+ L A   L     G QVHA +V    +   N  +A ALLD+Y K  C++  A ++F  
Sbjct: 216 ASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNR 275

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           + + + + +  +I  +A   Q KE+++LF     +         S+++ V A+   ++ G
Sbjct: 276 LEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQG 335

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H  T+ T A  +V VANSL+DMY KCG  +EA   F  +   + V WTAMI+   + 
Sbjct: 336 RQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKH 395

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ +EA+++F EM    +  D+  + ++L A +    +   ++  S +     +      
Sbjct: 396 GHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEH 455

Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ-S 471
            A ++D+  ++G L +A      MP    V  W  L+SAC  + +     ++ E ++   
Sbjct: 456 YACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAID 515

Query: 472 GYQPDSVSLLS 482
           G  P +  +LS
Sbjct: 516 GDNPVNYVMLS 526



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 205/441 (46%), Gaps = 11/441 (2%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            A  L A    + I  G Q+H  ++K  F  +  + N L+D+Y+K   +  A ++FG MP
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           E + VS+  ++  +  +   +E L+L   ++  +    ++F  S  L       D+  G 
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
            IH   +         VANSLV +Y+K GR  +A+ +F      + V W AMIS Y   G
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 356 NLEEALNLFIEMCR-----ANISADQATFASILRASAELASLSLGKQLHSFVIRSGF--M 408
           +  ++L +F EM +      +   D+ TFAS+L+A   L +   G Q+H+ ++  G    
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 409 SNVFSGSALLDMYAKSGSLKD-AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
           SN     ALLDMY K   L   A+Q F  + ++N + W  +I   AQ G  +  ++ F  
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
              SG + D   L SV+   +   L+E+G Q  +  T K           S++D+  + G
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQ-VHCYTVKTPAGLDVSVANSLIDMYHKCG 365

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             DEA +   ++P   + + W+++IN    H + + A    +++       D   Y+A+ 
Sbjct: 366 LTDEAARRFREVPAR-NVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALL 424

Query: 588 NIYAVAGQWESVSQVKKAMRE 608
           +  + +G  E   +   A+R 
Sbjct: 425 SACSHSGLVEECRRYFSAIRH 445


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/663 (37%), Positives = 377/663 (56%), Gaps = 38/663 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  VF+ + + + + +N ++ G A       A++++V M  LG  P+ ++F   L +
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVVE- 227
                    GRQ+HA V+K     + +V  +L+ +Y               S H  VV  
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 228 ---------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
                          ARK+F E+ E D VS+N MIT Y  N +Y+E+L+LF+E+  T   
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI----SEVKVANSLVDMYAKCGRFEE 328
             +    +++S  A    +++GRQ+H+            S +K+ N+L+D+Y+KCG  E 
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  LS    V W  +I  Y      +EAL LF EM R+    +  T  S+L A A 
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 389 LASLSLGKQLHSFVIRS--GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           L ++ +G+ +H ++ +   G  +     ++L+DMYAK G ++ A Q F  M  R++ SWN
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           A+I   A +G A A    F  M  +  +PD ++ + +LSACSH GL++ G Q F SMTQ 
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           Y L PK EHY  M+D+L  SG F EAE+++  MP EPD ++W S++ +C+ H NLE A+ 
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAES 493

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
            A +L K+E   ++  YV +SNIYA AG+WE V++V+  +  +G++KV   S +E+ S V
Sbjct: 494 FAQKLIKIEP-ENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F   D+LHP+  EI   +E +  ++++ G+ PDTS  L + +EE K  +L++HSE+LA
Sbjct: 553 HEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLA 612

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           IAF LI+T  G+ + ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC 
Sbjct: 613 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCC 672

Query: 747 DFW 749
           D+W
Sbjct: 673 DYW 675



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 224/478 (46%), Gaps = 40/478 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  ++ G++  +    A +++V M    G  P+  +F  LL
Sbjct: 13  GLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRM-VSLGHLPNSYSFPFLL 71

Query: 81  SGCSEPDTANELIQVHADIIKFG-------YNSIL------------------------I 109
             C++     E  Q+HA ++K G       + S++                        +
Sbjct: 72  KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
            C +L+  Y        AR+VF E+ ++D VS+NA+ITG+ + G  EEA++LF EM    
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT----NFVENVFVANALLDLYSKHDCV 225
            +P + T  + +SA      I LGRQVH++V        F  ++ + NAL+DLYSK   V
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
             A  LF  +   D VS+N +I  Y     YKE+L LF+E+  +    +     ++L   
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC 311

Query: 286 ANKLDLQIGRQIHT--QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
           A+   + IGR IH      +    +E  +  SL+DMYAKCG  E A ++F ++ + S   
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS 371

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFV 402
           W AMI  +   G    A +LF  M    +  D  TF  +L A +    L LG+Q+  S  
Sbjct: 372 WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMT 431

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
                   +     ++D+   SG  K+A +    MP E + V W +L+ AC ++G+ +
Sbjct: 432 QDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 188/367 (51%), Gaps = 11/367 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G+  +AR++F+ + +R  VSW  +I GY +  ++ EA +LF +
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186

Query: 63  -MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI----IKFGYNSILIICNSLVDS 117
            MRT+    PD  T  +++S C++  +     QVH+ +       G++S L I N+L+D 
Sbjct: 187 MMRTN--VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDL 244

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   ++ A  +F+ +  KD VS+N LI G+    L +EA+ LF EM   G  P+D T 
Sbjct: 245 YSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTL 304

Query: 178 AAALSAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
            + L A   L  I +GR +H ++ K          +  +L+D+Y+K   +  A ++F  M
Sbjct: 305 LSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM 364

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
                 S+N MI  +A + +   +  LF  ++  R +     F  LLS  ++   L +GR
Sbjct: 365 LYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGR 424

Query: 296 QI-HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
           QI  + T       +++    ++D+    G F+EA+E+   +      V W +++ A  +
Sbjct: 425 QIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKK 484

Query: 354 KGNLEEA 360
            GNLE A
Sbjct: 485 HGNLELA 491


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 412/739 (55%), Gaps = 7/739 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           ++  G LA AR++F+ +    A ++  LI  YS    F  A  L+  M     + P+  T
Sbjct: 44  HISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVA-PNKYT 102

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  +L  CS          +HA     G ++ L +  +L+D Y +      AR VF +MP
Sbjct: 103 FPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMP 162

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGR 194
            +D V++NA++ G+A  G+   AI   ++MQ H G +P+  T  + L        +  G 
Sbjct: 163 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGT 222

Query: 195 QVHAFVVKTNFVEN---VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            +HA+ ++    +N   V +  ALLD+Y+K   +V A ++F  MP  + V+++ +I  + 
Sbjct: 223 SIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFV 282

Query: 252 WNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             ++  E+  LF+++        S    ++ L V A+  DL +G Q+H     +   +++
Sbjct: 283 LCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADL 342

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             +NSL+ MYAK G   EA   F  ++   T+ + A++S  VQ G  EEA  +F +M   
Sbjct: 343 TASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC 402

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N+  D AT  S++ A + LA+L  GK  H  VI  G        ++L+DMYAK G +  +
Sbjct: 403 NMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            Q F +MP R++VSWN +I+    +G  +     F  M   G+ PD V+ + +++ACSH 
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+ EG  +F++MT KY + P+ EHY  MVD+L R G  DEA + +  MP + D  +W +
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CRIHKN++  K+ +  + K+        +V +SNI++ AG+++  ++V+   + +G
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGP-EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKG 641

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            +K   YSW+E+   +H F   D+ HP + +I  +++N+M ++KK GY+ DTS  L D +
Sbjct: 642 FKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLE 701

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K ++L YHSE+LAIAF +++  E   I V KNLR C DCH AIK ++ +  R I VR
Sbjct: 702 EEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVR 761

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFHHFK+G CSC +FW
Sbjct: 762 DTNRFHHFKNGQCSCGNFW 780



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 221/451 (49%), Gaps = 8/451 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  LI  Y++      AR +F  M  R  V+W  ++ GY+    +  A    +DM+  GG
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS---ILIICNSLVDSYCKIRCLD 125
             P+  T  +LL   ++     +   +HA  ++         ++I  +L+D Y K + L 
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSA 183
            A RVF  MP ++ V+++ALI GF       EA  LF +M  + L F  S  + A+AL  
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL-SATSVASALRV 316

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LAD+ +G Q+HA + K+    ++  +N+LL +Y+K   + EA   F E+   D +SY
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +++    N + +E+  +F+++Q    +       +L+   ++   LQ G+  H   I+
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                E  + NSL+DMYAKCG+ + ++++F  +     V W  MI+ Y   G  +EA  L
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYA 422
           F+ M     + D  TF  ++ A +    ++ GK    +   + G +  +     ++D+ A
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLA 556

Query: 423 KSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           + G L +A Q  + MP + ++  W AL+ AC
Sbjct: 557 RGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 210/494 (42%), Gaps = 60/494 (12%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K   L  A  +F+ M  R  V+W+ LIGG+   ++  EAF LF DM  +G    
Sbjct: 246 LLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFL 305

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              + A+ L  C+     +   Q+HA I K G ++ L   NSL+  Y K   ++ A   F
Sbjct: 306 SATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFF 365

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+  KD++S+ AL++G  + G  EEA  +F +MQ    +P   T  + + A   LA + 
Sbjct: 366 DEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQ 425

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+  H  V+         + N+L+D+Y+K   +  +R++F +MP  D VS+N MI  Y 
Sbjct: 426 HGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG 485

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +   KE+  LF  ++   F      F  L++  ++                        
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS----------------------- 522

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH-ISTVP----WTAMISAYVQKGNLEEALNLFIE 366
                       G   E K  F  ++H    +P    +  M+    + G L+EA      
Sbjct: 523 ------------GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--------FMSNVFSGSALL 418
           M    + AD   + ++L A     ++ LGKQ+   + + G         +SN+FS +   
Sbjct: 571 M---PLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE--------DMVQ 470
           D  A+   ++  ++ FK+ P  + +  N  + A      +    +           D+ +
Sbjct: 628 DEAAEVRIIQK-VKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686

Query: 471 SGYQPDSVSLLSVL 484
            GYQ D+  +L  L
Sbjct: 687 LGYQADTSFVLQDL 700



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +  ++N L+S Y K+G +  A   F+ +  +  +S+  L+ G  Q  +  EAF +F  M+
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                +PD  T  +L+  CS           H  +I  G      ICNSL+D Y K   +
Sbjct: 401 A-CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKI 459

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           DL+R+VF +MP +D VS+N +I G+   GL +EA  LF+ M++ GF P D TF   ++A
Sbjct: 460 DLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/705 (35%), Positives = 392/705 (55%), Gaps = 14/705 (1%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           S+  +  EAF+ F +M   G S   Y ++  L   C E  + +    +H  +     N  
Sbjct: 57  SKHGKLNEAFEFFQEMDKAGVSVSLY-SYQCLFEACRELRSLSHGRLLHNRMRMGIENPS 115

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           +++ N ++  YC+   L+ A ++F EM   ++VS   +I+ +A++GL ++A+ LF  M  
Sbjct: 116 VLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLE 175

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G KP    +   L + V    + +GRQ+HA V++     N  +   ++++Y K   +V 
Sbjct: 176 SGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVG 235

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A+++F +M     V++  ++  Y    + +++LKLF +L     +   F FS +L   A+
Sbjct: 236 AKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACAS 295

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             +L+ G+QIH          EV V   LVD Y KC  FE A   F  +   + V W+A+
Sbjct: 296 LEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 355

Query: 348 ISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           IS Y Q    EEA+  F  +   N +  +  T+ SI +A + LA  ++G Q+H+  I+  
Sbjct: 356 ISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 415

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
            + + +  SAL+ MY+K G L DA + F+ M   +IV+W A IS  A  G+A   L+ FE
Sbjct: 416 LIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 475

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            MV  G +P+SV+ ++VL+ACSH GL+E+G  Y ++M +KY + P  +HY  M+DI  RS
Sbjct: 476 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARS 535

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  DEA + M  MPFEPD + W   ++ C  HKNLE  K A ++L +++   D A YV  
Sbjct: 536 GLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDP-EDTAGYVLP 594

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            N+Y  AG+WE  ++V K M ER ++K  + SW++ K K+H F   D+ HPQ+ EI  K+
Sbjct: 595 FNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKL 654

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI--NTPEGSPILVMK 704
           +     M+ + ++    C++ +  E+     L  HSERLAIAF LI  N    +PI V K
Sbjct: 655 KEFDGFMEGDMFQ----CSMTERREQ-----LLDHSERLAIAFGLISVNGNARAPIKVFK 705

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLRAC DCH   K +S +TG EI +RDS RFHHFK+G CSC D+W
Sbjct: 706 NLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 229/455 (50%), Gaps = 4/455 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N + +  N ++  Y + G+L  A +LF+ M D  AVS T +I  Y+++    +A  LF
Sbjct: 111 IENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLF 170

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  P    + TLL     P   +   Q+HA +I+ G  S   I   +V+ Y K
Sbjct: 171 SRM-LESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVK 229

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A+RVF +M  K  V++  L+ G+ + G   +A+KLFV++   G +   F F+  
Sbjct: 230 CGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVV 289

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   L ++  G+Q+HA V K      V V   L+D Y K      A + F E+ E + 
Sbjct: 290 LKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 349

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           VS++ +I+ Y    Q++E++K F+ L+       + F ++++    +   D  IG Q+H 
Sbjct: 350 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHA 409

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I  + I      ++L+ MY+KCG  ++A E+F ++ +   V WTA IS +   GN  E
Sbjct: 410 DAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASE 469

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALL 418
           AL LF +M    +  +  TF ++L A +    +  GK  L + + +      +     ++
Sbjct: 470 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMI 529

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           D+YA+SG L +A++  K MP E + +SW   +S C
Sbjct: 530 DIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGC 564



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 178/350 (50%), Gaps = 4/350 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +++ YVK G L  A+ +F+ M  +  V+WT L+ GY+Q  + R+A KLFVD+ T+ G + 
Sbjct: 223 IVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITE-GVEW 281

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   F+ +L  C+  +      Q+HA + K G    + +   LVD Y K    + A R F
Sbjct: 282 DSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAF 341

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADI 190
           +E+ + + VS++A+I+G+ +    EEA+K F  ++       + FT+ +   A   LAD 
Sbjct: 342 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADC 401

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            +G QVHA  +K + + + +  +AL+ +YSK  C+ +A ++F  M   D V++   I+ +
Sbjct: 402 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGH 461

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISE 309
           A+     E+L+LF ++       +   F  +L+  ++   ++ G+  + T          
Sbjct: 462 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPT 521

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           +   + ++D+YA+ G  +EA     N+      + W   +S      NLE
Sbjct: 522 IDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLE 571



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 2/311 (0%)

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N+ +   + + +  E+ + F+E+       S + +  L         L  GR +H +  +
Sbjct: 50  NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRM 109

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 V + N ++ MY +CG  E+A ++F  +S ++ V  T MISAY ++G L++A+ L
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGL 169

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  M  +      + + ++L++     +L +G+Q+H+ VIR+G  SN    + +++MY K
Sbjct: 170 FSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVK 229

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G L  A + F +M  +  V+W  L+    Q G A+  LK F D++  G + DS     V
Sbjct: 230 CGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVV 289

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L AC+    +  G Q  ++   K  L  +      +VD   +   F+ A +   ++  EP
Sbjct: 290 LKACASLEELRFGKQ-IHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIR-EP 347

Query: 544 DEIMWSSVINS 554
           +++ WS++I+ 
Sbjct: 348 NDVSWSAIISG 358


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/713 (35%), Positives = 400/713 (56%), Gaps = 10/713 (1%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIK 101
           LI  +S+    R AF L   + +      PD  TF +L+   + P  A+   Q+HA  ++
Sbjct: 39  LIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIR--AAPSNASA-AQLHACALR 95

Query: 102 FGY-NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
            G     +    SLV +Y +   +  A +VF EM ++D  ++NA+++G  +     EA+ 
Sbjct: 96  LGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVG 155

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           LF  M   G      T ++ L   V L D  L   +H + VK    + +FV NAL+D+Y 
Sbjct: 156 LFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYG 215

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   + EA+ +F  M   D V++N +I+      Q   +LK+F+ ++ +          +
Sbjct: 216 KLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVS 275

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTT-AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           L S +A   D +  + +H   +     + ++   N++VDMYAK    E A+ +F ++   
Sbjct: 276 LASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQ 335

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
            +V W  +I+ Y+Q G   EA+  +  M +   + A Q TF S+L A + L +L  G ++
Sbjct: 336 DSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRM 395

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H+  I+ G   +V+ G+ L+D+YAK G L +A+  F++MP R+   WNA+IS    +G  
Sbjct: 396 HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHG 455

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              L  F  M Q G +PD V+ +S+L+ACSH GL+++G  +F+ M   Y + P  +HYA 
Sbjct: 456 AEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYAC 515

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           M D+L R+G  DEA   +  MP +PD  +W +++ +CRIH N+E  K A+  LF+++   
Sbjct: 516 MADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP-E 574

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND--ELH 636
           +   YV MSN+YA  G+W+ V +V+  +R + ++K   +S +E+K  V+VF + +  E H
Sbjct: 575 NVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPH 634

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
           PQ  EI+ ++ +L+ +++  GY  D S  L D +++ K   L  HSERLAIAF +INTP 
Sbjct: 635 PQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPS 694

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +P+ + KNLR C DCH A K IS+IT REI VRDS+RFHHFKDG CSC DFW
Sbjct: 695 RTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 174/353 (49%), Gaps = 5/353 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  A+ +F+ M  R  V+W  +I G  Q+ Q   A K+F  MR  G S
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVS 267

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC-NSLVDSYCKIRCLDLAR 128
            PD +T  +L S  ++         +H  +++ G++   II  N++VD Y K+  ++ A+
Sbjct: 268 -PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGL 187
           R+F  MP +DSVS+N LITG+ + GL  EA++ +  MQ H G K    TF + L A   L
Sbjct: 327 RMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHL 386

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G ++HA  +K     +V+V   L+DLY+K   + EA  LF +MP      +N +I
Sbjct: 387 GALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII 446

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +    +    E+L LF  +Q          F +LL+  ++   +  GR       VT  I
Sbjct: 447 SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDI 506

Query: 308 SEV-KVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             + K    + DM  + G+ +EA     N+     +  W A++ A    GN+E
Sbjct: 507 VPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + ++ N ++  Y K  N+  A+ +F+SM  + +VSW  LI GY Q     EA + +  M+
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G      TF ++L   S      + +++HA  IK G N  + +   L+D Y K   L
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA- 183
             A  +F++MP++ +  +NA+I+G    G   EA+ LF  MQ  G KP   TF + L+A 
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484

Query: 184 -GVGLAD 189
              GL D
Sbjct: 485 SHAGLVD 491


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/708 (34%), Positives = 397/708 (56%), Gaps = 14/708 (1%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           S++ + +EA     +M  D        ++  L   C +  +  +   +H  + +   N  
Sbjct: 63  SKQGKLKEAHDFLKEM-DDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121

Query: 108 LIICNSLVDSYCKI-RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
             I N L+  YC    C+D+ ++VF EM  K+ VS+  +I+ +AK G  E+AI+LF +MQ
Sbjct: 122 GSIENCLLRMYCDCGSCIDV-QKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQ 180

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G +P+   + + L + +G + + LG+Q+H+ V++     N+ V  A+ ++Y +   + 
Sbjct: 181 ASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLE 240

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A+ +F  M   + V++  ++  Y   ++ + +L+LF  +     +  +F FS +L V  
Sbjct: 241 GAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCC 300

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
              D  +GRQIH+  +   A SEV V   LVD Y KCG  E A   F  +S  + V W+A
Sbjct: 301 GLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSA 360

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           +IS + Q G LE+ + +F  +    +  +   + S+ +A A  A+L++G Q H   I+ G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
            +S ++  SA++ MY+K G L  A + F+ + E + V+W A+IS  A +G+A   L  F 
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M   G +P++V+ ++VL+ACSH GL+ E  QY  SM++ Y ++P  +HY  M+D   R+
Sbjct: 481 RMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRA 540

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G   EA +L+ +MPFEPD + W S++  C  H +L+  K AA+ LF+++   D A Y+ +
Sbjct: 541 GLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDP-GDTAGYILL 599

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            N+Y+  G+WE    V+K M ER ++K  + SW+ +K +VH F   D  HPQT  I  K+
Sbjct: 600 FNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKL 659

Query: 647 ENLM-----QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           E          ++    + D SC+L       + E L  HSE+LAIAF LI+T + +PIL
Sbjct: 660 EEFKCSVIDSPVRLLNEEDDVSCSL-----SARKEQLLDHSEKLAIAFGLISTEDNAPIL 714

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V KNLRAC DCH   K +S +TGR+I VRDS+RFHHFK G CSC D+W
Sbjct: 715 VFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 230/450 (51%), Gaps = 3/450 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G+    +++F+ M+ +  VSW I+I  Y++  +  +A +LF DM+   G 
Sbjct: 126 NCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS-GI 184

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+   + +LL  C  P       Q+H+ +I+   N+ + +  ++ + Y +   L+ A+ 
Sbjct: 185 RPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKL 244

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M  +++V++  L+ G+ +    E A++LF  M   G +  +F F+  L    GL D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLED 304

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +GRQ+H+ +VK      V V   L+D Y K   +  A + FG + E + VS++ +I+ 
Sbjct: 305 WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           ++ + + ++ +K+F  L+      + F ++++    A + +L +G Q H   I    +S 
Sbjct: 365 FSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY 424

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +   +++V MY+KCGR + A+  F ++     V WTA+IS Y   GN  EAL  F  M  
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQS 484

Query: 370 ANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +  TF ++L A +    ++  KQ L S     G    +     ++D Y+++G L+
Sbjct: 485 YGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQ 544

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +A++    MP E + +SW +L+  C  + D
Sbjct: 545 EALELINRMPFEPDAMSWKSLLGGCWAHCD 574



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 2/418 (0%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N  +   +K+G  +EA     EM       +  ++     A   L  +A GR +H  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T    +  + N LL +Y      ++ +K+F EM   + VS+ ++I+ YA N + +++++L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F ++Q +    +   + +LL        L++G+QIH+  I     + + V  ++ +MY +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E AK +F  +   + V WT ++  Y Q   LE AL LF  M    +  D+  F+ +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L+    L    +G+Q+HS +++ G  S V  G+ L+D Y K G ++ A ++F  + E N 
Sbjct: 296 LKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND 355

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSW+ALIS  +Q+G  +  +K F  +   G   +S    SV  AC+    +  G Q    
Sbjct: 356 VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGD 415

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             ++  L       ++MV +  + G  D A +    +  EPD + W+++I+    H N
Sbjct: 416 AIKR-GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 200/451 (44%), Gaps = 57/451 (12%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N      + + YV+ G L  A+ +F+ M  + AV+WT L+ GY+Q  +   A +LF  
Sbjct: 220 NANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G + D   F+ +L  C   +  +   Q+H+ I+K G  S + +   LVD Y K  
Sbjct: 280 MAME-GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCG 338

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A R F  + + + VS++ALI+GF++ G  E+ IK+F  ++  G   + F + +   
Sbjct: 339 DIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQ 398

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A    A++ +G Q H   +K   V  ++  +A++ +YSK   +  AR+ F  + E D V+
Sbjct: 399 ACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVA 458

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I+ YA++    E+L  FR +Q      +   F  +L+  ++               
Sbjct: 459 WTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS-------------- 504

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT-----AMISAYVQKGNL 357
                                G   EAK+   ++S    V  T      MI  Y + G L
Sbjct: 505 ---------------------GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR------SGFMSNV 411
           +EAL L   + R     D  ++ S+L        L LGK     + R      +G++   
Sbjct: 544 QEALEL---INRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYI--- 597

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                L ++Y+  G  ++A    K M ER +
Sbjct: 598 ----LLFNLYSAFGKWEEAGHVRKLMAEREL 624


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/758 (34%), Positives = 423/758 (55%), Gaps = 22/758 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+     ++F+ + +R  VSW  LI       ++  A + F  M  D   
Sbjct: 50  NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENV 108

Query: 70  DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFG-YNSILIICNSLVDSYCKIRCLD 125
           +P   T  ++++ CS       L+   QVHA  ++ G  NS +I  N+LV  Y K+  L 
Sbjct: 109 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLA 166

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ++ +      +D V++N +++   +     EA++   EM   G +P +FT ++ L A  
Sbjct: 167 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 226

Query: 186 GLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            L  +  G+++HA+ +K   + EN FV +AL+D+Y     V+  R++F  M +     +N
Sbjct: 227 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 286

Query: 245 VMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y+ NE  KE+L LF  ++ +     +    + ++              IH   + 
Sbjct: 287 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 346

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  V N+L+DMY++ G+ + A  IF  +     V W  MI+ YV   + E+AL L
Sbjct: 347 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 406

Query: 364 FIEM-----------CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             +M            R ++  +  T  +IL + A L++L+ GK++H++ I++   ++V 
Sbjct: 407 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 466

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            GSAL+DMYAK G L+ + + F ++P++N+++WN +I A   +G+ Q  +     M+  G
Sbjct: 467 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 526

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+ +SV +ACSH G+++EGL+ F  M   Y + P  +HYA +VD+L R+G   EA
Sbjct: 527 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 586

Query: 533 EKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
            +LM  MP + ++   WSS++ + RIH NLE  + AA  L ++E    A+ YV ++NIY+
Sbjct: 587 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYS 645

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG W+  ++V++ M+E+GVRK    SW+E   +VH F A D  HPQ+ ++   +E L +
Sbjct: 646 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 705

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            M+KEGY PDTSC LH+ +E+ K   L  HSE+LAIAF ++NT  G+ I V KNLR C D
Sbjct: 706 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 765

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A K ISKI  REI +RD  RFH FK+G CSC D+W
Sbjct: 766 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 266/532 (50%), Gaps = 24/532 (4%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDL 126
           G  PD   F  LL   ++        Q+HA + KFGY    + + N+LV+ Y K      
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
             +VF  + +++ VS+N+LI+        E A++ F  M     +PS FT  + ++A   
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 187 LA---DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
           L     + +G+QVHA+ ++   + N F+ N L+ +Y K   +  ++ L G     D V++
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +++    NEQ  E+L+  RE+     +  +F  S++L   ++   L+ G+++H   + 
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243

Query: 304 TTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
             ++ E   V ++LVDMY  C +    + +F  +       W AMI+ Y Q  + +EAL 
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 303

Query: 363 LFIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           LFI M   A + A+  T A ++ A     + S  + +H FV++ G   + F  + L+DMY
Sbjct: 304 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 363

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISA---CAQNGDAQATLKSFEDM---VQSG--- 472
           ++ G +  A++ F +M +R++V+WN +I+       + DA   L   +++   V  G   
Sbjct: 364 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 423

Query: 473 --YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
              +P+S++L+++L +C+    + +G +  ++   K  L       +++VD+  + GC  
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 482

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            + K+  Q+P + + I W+ +I +  +H N    ++A D L +M  ++   P
Sbjct: 483 MSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAID-LLRMMMVQGVKP 529



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 261/522 (50%), Gaps = 26/522 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+   N L++ Y K G LA+++ L  S   R  V+W  ++    Q  Q  EA +   +M 
Sbjct: 148 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 207

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
            +G  +PD  T +++L  CS  +      ++HA  +K G  +    + ++LVD YC  + 
Sbjct: 208 LEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 266

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALS 182
           +   RRVF  M  +    +NA+I G+++   ++EA+ LF+ M+   G   +  T A  + 
Sbjct: 267 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 326

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V     +    +H FVVK     + FV N L+D+YS+   +  A ++FG+M + D V+
Sbjct: 327 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 386

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI--------- 293
           +N MIT Y ++E ++++L L  ++Q    +R     ++ +S+  N + L           
Sbjct: 387 WNTMITGYVFSEHHEDALLLLHKMQ--NLERKVSKGASRVSLKPNSITLMTILPSCAALS 444

Query: 294 ----GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
               G++IH   I     ++V V ++LVDMYAKCG  + ++++F  +   + + W  +I 
Sbjct: 445 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 504

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           AY   GN +EA++L   M    +  ++ TF S+  A +    +  G ++  +V++  +  
Sbjct: 505 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGV 563

Query: 410 NVFSG--SALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSF 465
              S   + ++D+  ++G +K+A Q    MP       +W++L+ A   + + +    + 
Sbjct: 564 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 623

Query: 466 EDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
           ++++Q   +P+  S   +L+   S  GL ++  +   +M ++
Sbjct: 624 QNLIQ--LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 663



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 207/418 (49%), Gaps = 15/418 (3%)

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVV 226
           LG KP ++ F A L A   L D+ LG+Q+HA V K  + V++V VAN L++LY K     
Sbjct: 4   LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
              K+F  + E + VS+N +I+     E+++ +L+ FR +     + S F   ++++  +
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 287 N---KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
           N      L +G+Q+H   +    ++   + N+LV MY K G+   +K +  +      V 
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W  ++S+  Q   L EAL    EM    +  D+ T +S+L A + L  L  GK+LH++ +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 404 RSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++G +  N F GSAL+DMY     +    + F  M +R I  WNA+I+  +QN   +  L
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302

Query: 463 KSFEDMVQS-GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
             F  M +S G   +S ++  V+ AC   G      +  +    K  L   +    +++D
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK-EAIHGFVVKRGLDRDRFVQNTLMD 361

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           +  R G  D A ++  +M  + D + W+++I          F++   D L  + K+++
Sbjct: 362 MYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG------YVFSEHHEDALLLLHKMQN 412



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 182/370 (49%), Gaps = 14/370 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N+   + L+  Y     + + R +F+ M DR    W  +I GYSQ    +EA  LF+ 
Sbjct: 248 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 307

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G   +  T A ++  C      +    +H  ++K G +    + N+L+D Y ++ 
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 367

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----------GFK 171
            +D+A R+F +M  +D V++N +ITG+     +E+A+ L  +MQ+L             K
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+  T    L +   L+ +A G+++HA+ +K N   +V V +AL+D+Y+K  C+  +RK+
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++P+ + +++NV+I  Y  +   +E++ L R +       ++  F ++ +  ++   +
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 547

Query: 292 QIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMI 348
             G +I         +       + +VD+  + GR +EA ++   +         W++++
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607

Query: 349 SAYVQKGNLE 358
            A     NLE
Sbjct: 608 GASRIHNNLE 617


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/628 (37%), Positives = 375/628 (59%), Gaps = 11/628 (1%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K   + D  S+N+LI   A+ G + E+++ F  M+ L  KP+  TF  A+ +   L D+ 
Sbjct: 40  KYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLN 99

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q H   +   F  ++FV++AL+D+YSK   +  AR LF E+P  + V++  +IT Y 
Sbjct: 100 SGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV 159

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFST---------LLSVVANKLDLQIGRQIHTQTI 302
            N+   E+L +F+E  F + + +     T         +LS  +   +  +   +H   I
Sbjct: 160 QNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI 219

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                  + V N+L+D YAKCG    ++++F +++    V W +MI+ Y Q G   +A  
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFE 279

Query: 363 LFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           +F  M +A     ++ T +++L A A   +L +G  LH  VI+ G+++NV   ++++DMY
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G  + A   F  M E+N+ SW A+I+    +G A+  L  F  M+ +G +P+ ++ +
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFI 399

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           SVL+ACSH G +EEG ++FN+M+ +Y + P  EHY  MVD+L R+G   EA  L+  M  
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             D ++W S++ +CRIHK++E A+ +A +LFK++   +   YV ++NIYA AG+W+ V +
Sbjct: 460 RRDFVLWGSLLAACRIHKDVELAEISARELFKLDP-SNCGYYVLLANIYADAGRWKDVER 518

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           ++  +++RG+ K   YS VELK +VHVF   D+ HPQ  +I + +E L  ++++ GY P+
Sbjct: 519 MRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPN 578

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            +  LHD DEE K   ++ HSE+LA+AF ++N+  GS I V+KNLR C DCH  IKLISK
Sbjct: 579 MASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISK 638

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I  REI VRD+ RFHHFKDG CSC D+W
Sbjct: 639 IVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 223/456 (48%), Gaps = 25/456 (5%)

Query: 21  NLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           NL T   LFN   DRT V SW  LI   ++     E+ + F  MR      P+  TF   
Sbjct: 33  NLTT---LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLD-IKPNRSTFPCA 88

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +  CS     N   Q H   + FG+ S L + ++L+D Y K   L  AR +F E+P+++ 
Sbjct: 89  IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNI 148

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEM---------QHLGFKPSDFTFAAALSAGVGLADI 190
           V++ +LITG+ +     EA+ +F E          + +G         + LSA   +++ 
Sbjct: 149 VTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNK 208

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           A+   VH   +K    + + V N LLD Y+K   V  +RK+F +M E D VS+N MI  Y
Sbjct: 209 AVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVY 268

Query: 251 AWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           A N    ++ ++F   L+      ++   STLL   A++  L++G  +H Q I    ++ 
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN 328

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V +A S++DMY KCG+ E A+  F  +   +   WTAMI+ Y   G   EAL++F +M  
Sbjct: 329 VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388

Query: 370 ANISADQATFASILRASAELASLSLGKQL-----HSFVIRSGFMSNVFSGSALLDMYAKS 424
           A +  +  TF S+L A +    L  G +      H + +  G    V     ++D+  ++
Sbjct: 389 AGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPG----VEHYGCMVDLLGRA 444

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           G +K+A    K M   R+ V W +L++AC  + D +
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVE 480



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 11/353 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA---FKLFVDMRT 65
           ++ LI  Y K G L+ AR LF+ +  R  V+WT LI GY Q +   EA   FK F+  ++
Sbjct: 120 SSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKS 179

Query: 66  DG-----GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +G     G+  D V   ++LS CS          VH   IK G + ++ + N+L+D+Y K
Sbjct: 180 EGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAK 239

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAA 179
              + L+R+VF +M +KD VS+N++I  +A+ GL+ +A ++F  M +  G K ++ T + 
Sbjct: 240 CGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLST 299

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A      + +G  +H  V+K  +V NV +A +++D+Y K      AR  F  M E +
Sbjct: 300 LLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKN 359

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIH 298
             S+  MI  Y  +   +E+L +F ++ +     +   F ++L+  ++   L+ G R  +
Sbjct: 360 VRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFN 419

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             +        V+    +VD+  + G  +EA  +  ++      V W ++++A
Sbjct: 420 AMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            N +    +I  Y K G    AR  F+ M ++   SWT +I GY      REA  +F  M
Sbjct: 327 NNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM 386

Query: 64  RTDGGSDPDYVTFATLLSGCSE 85
               G  P+Y+TF ++L+ CS 
Sbjct: 387 -IWAGVKPNYITFISVLAACSH 407


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/758 (34%), Positives = 423/758 (55%), Gaps = 22/758 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+     ++F+ + +R  VSW  LI       ++  A + F  M  D   
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENV 195

Query: 70  DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFG-YNSILIICNSLVDSYCKIRCLD 125
           +P   T  ++++ CS       L+   QVHA  ++ G  NS +I  N+LV  Y K+  L 
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLA 253

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ++ +      +D V++N +++   +     EA++   EM   G +P +FT ++ L A  
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313

Query: 186 GLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            L  +  G+++HA+ +K   + EN FV +AL+D+Y     V+  R++F  M +     +N
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373

Query: 245 VMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y+ NE  KE+L LF  ++ +     +    + ++              IH   + 
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  V N+L+DMY++ G+ + A  IF  +     V W  MI+ YV   + E+AL L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 364 FIEM-----------CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             +M            R ++  +  T  +IL + A L++L+ GK++H++ I++   ++V 
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            GSAL+DMYAK G L+ + + F ++P++N+++WN +I A   +G+ Q  +     M+  G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+ +SV +ACSH G+++EGL+ F  M   Y + P  +HYA +VD+L R+G   EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 533 EKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
            +LM  MP + ++   WSS++ + RIH NLE  + AA  L ++E    A+ YV ++NIY+
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYS 732

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG W+  ++V++ M+E+GVRK    SW+E   +VH F A D  HPQ+ ++   +E L +
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            M+KEGY PDTSC LH+ +E+ K   L  HSE+LAIAF ++NT  G+ I V KNLR C D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A K ISKI  REI +RD  RFH FK+G CSC D+W
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 280/565 (49%), Gaps = 25/565 (4%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R+   W  L+    + N  REA   +VDM   G   PD   F  LL   ++        Q
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 95  VHADIIKFGYN-SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +HA + KFGY    + + N+LV+ Y K        +VF  + +++ VS+N+LI+      
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---DIALGRQVHAFVVKTNFVENVF 210
             E A++ F  M     +PS FT  + ++A   L     + +G+QVHA+ ++   + N F
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSF 237

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + N L+ +Y K   +  ++ L G     D V++N +++    NEQ  E+L+  RE+    
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEA 329
            +  +F  S++L   ++   L+ G+++H   +   ++ E   V ++LVDMY  C +    
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAE 388
           + +F  +       W AMI+ Y Q  + +EAL LFI M   A + A+  T A ++ A   
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             + S  + +H FV++ G   + F  + L+DMY++ G +  A++ F +M +R++V+WN +
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477

Query: 449 ISA---CAQNGDAQATLKSFEDM---VQSG-----YQPDSVSLLSVLSACSHCGLIEEGL 497
           I+       + DA   L   +++   V  G      +P+S++L+++L +C+    + +G 
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG- 536

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           +  ++   K  L       +++VD+  + GC   + K+  Q+P + + I W+ +I +  +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAP 582
           H N    ++A D L +M  ++   P
Sbjct: 596 HGN---GQEAID-LLRMMMVQGVKP 616



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 257/520 (49%), Gaps = 22/520 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+   N L++ Y K G LA+++ L  S   R  V+W  ++    Q  Q  EA +   +M 
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
            +G  +PD  T +++L  CS  +      ++HA  +K G  +    + ++LVD YC  + 
Sbjct: 295 LEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALS 182
           +   RRVF  M  +    +NA+I G+++   ++EA+ LF+ M+   G   +  T A  + 
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V     +    +H FVVK     + FV N L+D+YS+   +  A ++FG+M + D V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473

Query: 243 YNVMITCYAWNEQYKESLKLFRELQ-----------FTRFDRSQFPFSTLLSVVANKLDL 291
           +N MIT Y ++E ++++L L  ++Q                 +     T+L   A    L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G++IH   I     ++V V ++LVDMYAKCG  + ++++F  +   + + W  +I AY
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
              GN +EA++L   M    +  ++ TF S+  A +    +  G ++  +V++  +    
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP 652

Query: 412 FSG--SALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFED 467
            S   + ++D+  ++G +K+A Q    MP       +W++L+ A   + + +    + ++
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712

Query: 468 MVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
           ++Q   +P+  S   +L+   S  GL ++  +   +M ++
Sbjct: 713 LIQ--LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 182/370 (49%), Gaps = 14/370 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N+   + L+  Y     + + R +F+ M DR    W  +I GYSQ    +EA  LF+ 
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G   +  T A ++  C      +    +H  ++K G +    + N+L+D Y ++ 
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----------GFK 171
            +D+A R+F +M  +D V++N +ITG+     +E+A+ L  +MQ+L             K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+  T    L +   L+ +A G+++HA+ +K N   +V V +AL+D+Y+K  C+  +RK+
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++P+ + +++NV+I  Y  +   +E++ L R +       ++  F ++ +  ++   +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634

Query: 292 QIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMI 348
             G +I         +       + +VD+  + GR +EA ++   +         W++++
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694

Query: 349 SAYVQKGNLE 358
            A     NLE
Sbjct: 695 GASRIHNNLE 704



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 28/303 (9%)

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           L FT    S FPF + L        L   R  H   +  T  S  +   S V        
Sbjct: 5   LAFTFSLPSIFPFPSQL--------LPFSRHKHPYLLRATPTSATEDVASAVS------- 49

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
              A  IF + S  S   W  ++ + V+   L EA+  +++M    I  D   F ++L+A
Sbjct: 50  --GAPSIFISQSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106

Query: 386 SAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
            A+L  + LGKQ+H+ V + G+ + +V   + L+++Y K G      + F  + ERN VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN+LIS+       +  L++F  M+    +P S +L+SV++ACS+  +  EGL       
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQV 224

Query: 505 QKYKLRPKKEHYASMVDILC----RSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHK 559
             Y LR K E  + +++ L     + G    ++ L+       D + W++V++S C+  +
Sbjct: 225 HAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQ 282

Query: 560 NLE 562
            LE
Sbjct: 283 LLE 285


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/660 (35%), Positives = 380/660 (57%), Gaps = 8/660 (1%)

Query: 95  VHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           VHA I+K         + N L++ Y K+   + AR V +  P ++ VS+ +LI+G A+ G
Sbjct: 28  VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               A+  F EM+  G  P+DFTF  A  A   L     G+Q+HA  VK   + +VFV  
Sbjct: 88  HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD- 272
           +  D+Y K     +ARKLF E+PE +  ++N  I+    + + +E+++ F  ++F R D 
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDG 205

Query: 273 -RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
             +   F   L+  ++ L L +G Q+H   + +   ++V V N L+D Y KC +   ++ 
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           IF  +   + V W ++++AYVQ    E+A  L++   +  +       +S+L A A +A 
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L LG+ +H+  +++     +F GSAL+DMY K G ++D+ Q F EMPE+N+V+ N+LI  
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385

Query: 452 CAQNGDAQATLKSFEDMVQSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
            A  G     L  FE+M   G    P+ ++ +S+LSACS  G +E G++ F+SM   Y +
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P  EHY+ +VD+L R+G  + A + + +MP +P   +W ++ N+CR+H   +    AA+
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            LFK++  +D+  +V +SN +A AG+W   + V++ ++  G++K   YSW+ +K++VH F
Sbjct: 506 NLFKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAF 564

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
            A D  H    EI+  +  L  EM+  GYKPD   +L+D +EE K   + +HSE+LA+AF
Sbjct: 565 QAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAF 624

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L++ P   PI + KNLR C DCH+  K +S    REI VRD++RFH FKDG CSC+D+W
Sbjct: 625 GLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 228/465 (49%), Gaps = 5/465 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ Y K  +  +AR +      R  VSWT LI G +Q   F  A   F +MR +G  
Sbjct: 46  NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D+ TF       +         Q+HA  +K G    + +  S  D YCK R  D AR+
Sbjct: 106 PNDF-TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E+P+++  ++NA I+    +G   EAI+ F+E + +   P+  TF A L+A      
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG Q+H  V+++ F  +V V N L+D Y K   +  +  +F EM   + VS+  ++  
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N + +++  L+   +    + S F  S++LS  A    L++GR IH   +       
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V ++LVDMY KCG  E++++ F  +   + V   ++I  Y  +G ++ AL LF EM  
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404

Query: 370 ANI--SADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
                + +  TF S+L A +   ++  G K   S     G        S ++DM  ++G 
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464

Query: 427 LKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ 470
           ++ A +  K+MP +  +S W AL +AC  +G  Q  L + E++ +
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 215/438 (49%), Gaps = 21/438 (4%)

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L   +  + + LGR VHA +VKT +     F+AN L+++YSK D    AR +    P  +
Sbjct: 13  LKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+  +I+  A N  +  +L  F E++      + F F      VA+      G+QIH 
Sbjct: 73  VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +    I +V V  S  DMY K    ++A+++F  +   +   W A IS  V  G   E
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+  FIE  R +   +  TF + L A ++   L+LG QLH  V+RSGF ++V   + L+D
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG-DAQAT---LKSFEDMVQSGYQP 475
            Y K   ++ +   F EM  +N VSW +L++A  QN  D +A+   L+S +D+V++    
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET---- 308

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
               + SVLSAC+    +E G +  ++   K  +       +++VD+  + GC +++E+ 
Sbjct: 309 SDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP------YVAMSNI 589
             +MP E + +  +S+I        ++ A      LF+    R   P      +V++ + 
Sbjct: 368 FDEMP-EKNLVTRNSLIGGYAHQGQVDMAL----ALFEEMAPRGCGPTPNYMTFVSLLSA 422

Query: 590 YAVAGQWESVSQVKKAMR 607
            + AG  E+  ++  +MR
Sbjct: 423 CSRAGAVENGMKIFDSMR 440



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 33/216 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA------VSWTILIGGYSQKNQFR 54
           MP +N V+ N LI GY   G +  A  LF  M  R        +++  L+   S+     
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430

Query: 55  EAFKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
              K+F  MR+  G +P    Y     +L      + A E I+      K      + + 
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK------KMPIQPTISVW 484

Query: 112 NSLVDSYCKIR-----CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            +L ++ C++       L  A  +FK  P KDS +   L   FA  G   EA  +  E++
Sbjct: 485 GALQNA-CRMHGKPQLGLLAAENLFKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREELK 542

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
            +G K            G G + I +  QVHAF  K
Sbjct: 543 GVGIK-----------KGAGYSWITVKNQVHAFQAK 567


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/609 (39%), Positives = 358/609 (58%), Gaps = 4/609 (0%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N ++  +A  G + EAI L++ MQ +G   ++FT+   L           G  VH  VV+
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T F  ++FV  AL+D+Y+K   + +A ++F  M   D V +  MIT Y   E+  ++L L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           FR++Q   F   +    ++ S V    D ++   +H   ++   I +V V NS+V MYAK
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E A+ +F  +   + + W +M+S Y Q G   +AL+LF +M  +    +  T   +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK--EMPER 440
           + A + L S  LG++LH+FVI S    +    +A++DMY K G L  A++ F   E+ ER
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++ SWN LIS    +G  +  L+ F  M   G +P+ ++  S+LSACSH GLI+EG + F
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             MT K  +RP+ +HYA MVD+L R+G  +EA +L+ ++P  P + +W +++ +CRIH N
Sbjct: 461 ADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
            E  + AA+ LF++E       YV MSNIYA + +W+ V  V++ M+ RG++K  A+S +
Sbjct: 520 TELGEIAANNLFQLEP-EHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 578

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           E  ++VH F   D+  P   E+ RK+E+L  EMK  GY PD SC LHD + E K   L Y
Sbjct: 579 EFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNY 638

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSE+LA+AF ++   +G PI V KNLR C+DCH A K IS I GR+I VRD +RFHHF+ 
Sbjct: 639 HSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQG 698

Query: 741 GFCSCRDFW 749
           G CSC D+W
Sbjct: 699 GRCSCGDYW 707



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 12/459 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVS--------WTILIGGYSQKNQFREAFKLFVDM 63
           LI  Y K G+L +AR LF+                    ++  Y+   +  EA  L++ M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G    ++ T+  +L  C+    A     VH  +++ G+ S L +  +LVD Y K   
Sbjct: 124 QRMGVGVNNF-TYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A  VF  M  +D V + A+IT + +     +A+ LF +MQ  GF   + T  +  SA
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L D  +   VH + V   F+ +V V N+++ +Y+K   V  AR +F  M E +G+S+
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N M++ Y  N +  ++L LF ++Q +  D +      ++S  +      +GR++H   I 
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 362

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEAL 361
           +    +  + N+++DMY KCG  + A E+F N  L       W  +IS Y   G+ +EAL
Sbjct: 363 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 422

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF  M    +  +  TF SIL A +    +  G++  + + +      +   + ++DM 
Sbjct: 423 ELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDML 482

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQ 459
            ++G L +A +  K++P R +   W AL+ AC  +G+ +
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 521



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 3/229 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K GN+  AR +F+ M +R  +SW  ++ GY+Q  +  +A  LF  M+     
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS-EC 330

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           DP+ VT   ++S CS   + +   ++H  +I    +    + N+++D Y K   LD A  
Sbjct: 331 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 390

Query: 130 VFK--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           +F   E+ ++D  S+N LI+G+   G  +EA++LF  MQ  G +P+D TF + LSA    
Sbjct: 391 MFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 450

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
             I  GR+  A + K +    +     ++D+  +   + EA +L  ++P
Sbjct: 451 GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 499


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/758 (34%), Positives = 423/758 (55%), Gaps = 22/758 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+     ++F+ + +R  VSW  LI       ++  A + F  M  D   
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENV 195

Query: 70  DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFG-YNSILIICNSLVDSYCKIRCLD 125
           +P   T  ++++ CS       L+   QVHA  ++ G  NS +I  N+LV  Y K+  L 
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLA 253

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ++ +      +D V++N +++   +     EA++   EM   G +P +FT ++ L A  
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313

Query: 186 GLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            L  +  G+++HA+ +K   + EN FV +AL+D+Y     V+  R++F  M +     +N
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373

Query: 245 VMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y+ NE  KE+L LF  ++ +     +    + ++              IH   + 
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  V N+L+DMY++ G+ + A  IF  +     V W  MI+ YV   + E+AL L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 364 FIEM-----------CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             +M            R ++  +  T  +IL + A L++L+ GK++H++ I++   ++V 
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            GSAL+DMYAK G L+ + + F ++P++N+++WN +I A   +G+ Q  +     M+  G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+ +SV +ACSH G+++EGL+ F  M   Y + P  +HYA +VD+L R+G   EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 533 EKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
            +LM  MP + ++   WSS++ + RIH NLE  + AA  L ++E    A+ YV ++NIY+
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYS 732

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG W+  ++V++ M+E+GVRK    SW+E   +VH F A D  HPQ+ ++   +E L +
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            M+KEGY PDTSC LH+ +E+ K   L  HSE+LAIAF ++NT  G+ I V KNLR C D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A K ISKI  REI +RD  RFH FK+G CSC D+W
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 280/565 (49%), Gaps = 25/565 (4%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           R+   W  L+    + N  REA   +VDM   G   PD   F  LL   ++        Q
Sbjct: 60  RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQ 118

Query: 95  VHADIIKFGYN-SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +HA + KFGY    + + N+LV+ Y K        +VF  + +++ VS+N+LI+      
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---DIALGRQVHAFVVKTNFVENVF 210
             E A++ F  M     +PS FT  + ++A   L     + +G+QVHA+ ++   + N F
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSF 237

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + N L+ +Y K   +  ++ L G     D V++N +++    NEQ  E+L+  RE+    
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEA 329
            +  +F  S++L   ++   L+ G+++H   +   ++ E   V ++LVDMY  C +    
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAE 388
           + +F  +       W AMI+ Y Q  + +EAL LFI M   A + A+  T A ++ A   
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             + S  + +H FV++ G   + F  + L+DMY++ G +  A++ F +M +R++V+WN +
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477

Query: 449 ISA---CAQNGDAQATLKSFEDM---VQSG-----YQPDSVSLLSVLSACSHCGLIEEGL 497
           I+       + DA   L   +++   V  G      +P+S++L+++L +C+    + +G 
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG- 536

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           +  ++   K  L       +++VD+  + GC   + K+  Q+P + + I W+ +I +  +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAP 582
           H N    ++A D L +M  ++   P
Sbjct: 596 HGN---GQEAID-LLRMMMVQGVKP 616



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 257/520 (49%), Gaps = 22/520 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+   N L++ Y K G LA+++ L  S   R  V+W  ++    Q  Q  EA +   +M 
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
            +G  +PD  T +++L  CS  +      ++HA  +K G  +    + ++LVD YC  + 
Sbjct: 295 LEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALS 182
           +   RRVF  M  +    +NA+I G+++   ++EA+ LF+ M+   G   +  T A  + 
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V     +    +H FVVK     + FV N L+D+YS+   +  A ++FG+M + D V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473

Query: 243 YNVMITCYAWNEQYKESLKLFRELQ-----------FTRFDRSQFPFSTLLSVVANKLDL 291
           +N MIT Y ++E ++++L L  ++Q                 +     T+L   A    L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G++IH   I     ++V V ++LVDMYAKCG  + ++++F  +   + + W  +I AY
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
              GN +EA++L   M    +  ++ TF S+  A +    +  G ++  +V++  +    
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP 652

Query: 412 FSG--SALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFED 467
            S   + ++D+  ++G +K+A Q    MP       +W++L+ A   + + +    + ++
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712

Query: 468 MVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
           ++Q   +P+  S   +L+   S  GL ++  +   +M ++
Sbjct: 713 LIQ--LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 182/370 (49%), Gaps = 14/370 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N+   + L+  Y     + + R +F+ M DR    W  +I GYSQ    +EA  LF+ 
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G   +  T A ++  C      +    +H  ++K G +    + N+L+D Y ++ 
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----------GFK 171
            +D+A R+F +M  +D V++N +ITG+     +E+A+ L  +MQ+L             K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+  T    L +   L+ +A G+++HA+ +K N   +V V +AL+D+Y+K  C+  +RK+
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++P+ + +++NV+I  Y  +   +E++ L R +       ++  F ++ +  ++   +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634

Query: 292 QIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMI 348
             G +I         +       + +VD+  + GR +EA ++   +         W++++
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694

Query: 349 SAYVQKGNLE 358
            A     NLE
Sbjct: 695 GASRIHNNLE 704


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/737 (34%), Positives = 402/737 (54%), Gaps = 6/737 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S  V+ G    A ++F  M +R   SW +++GGY +     EA  L+  M    G+
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW-AGA 191

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          +VHA +++FG    + + N+LV  Y K   ++ AR+
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M   D +S+NA+I G  +    E  ++LF+ M     +P+  T  +   A   L+D
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +++HA  VK  F  +V   N+L+ +YS    + EA  +F  M   D +S+  MI+ 
Sbjct: 312 LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISG 371

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    ++L+++  ++           ++ L+  A+   L +G ++H        I  
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + VAN+LV+MYAK    E+A E+F  +     + W++MI+ +       EAL  F  M  
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML- 490

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A++  +  TF + L A A   SL  GK++H+ V+R G  S  +  +ALLD+Y K G    
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F     +++VSWN +++    +G     L  F +M+++G  PD V+ +++L  CS 
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ +G + F+SMT+KY + P  +HYA MVD+L R G   E    + +MP  PD  +W 
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWG 670

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N CRIH+N+E  + AA  + ++E   DA  +V +S++YA AG W  VS+V+K MR +
Sbjct: 671 ALLNGCRIHRNIELGELAAKIVLELEP-NDAGYHVLLSDLYADAGMWAEVSKVRKTMRVK 729

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+      SWVE+K  +H F  +DE HPQ  EI   ++ + + MK  G+ P  S +L  E
Sbjct: 730 GLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSL--E 787

Query: 670 DEEI-KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           D+E+ K + L  HSERLA+AF LINT  G+ I V KN   C  CH  +++ISKI  REIT
Sbjct: 788 DKEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREIT 847

Query: 729 VRDSSRFHHFKDGFCSC 745
           VRD+  FHHF+DG CSC
Sbjct: 848 VRDTKEFHHFRDGSCSC 864



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 179/353 (50%), Gaps = 3/353 (0%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NA+L +  +      A K+F +MPE D  S+NVM+  Y      +E+L L+  + +  
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                + F  +L       DL +GR++H   +      EV V N+LV MYAKCG  E A+
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  +S    + W AMI+ + +    E  L LF+ M    +  +  T  S+  AS  L+
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L   K++H+  ++ GF ++V   ++L+ MY+  G + +A   F  M  R+ +SW A+IS
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
              +NG     L+ +  M  +   PD V++ S L+AC+  G ++ G++     T K  +R
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHKNLE 562
                 A +V++  +S   ++A ++   MP + D I WSS+I   C  HKN E
Sbjct: 431 YIVVANA-LVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIAGFCFNHKNFE 481



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 98/177 (55%)

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+++ M  + G    A ++FA +       W  M+  Y + G LEEAL+L+  M  
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A    D  TF  +LR+   +  L++G+++H+ V+R G    V   +AL+ MYAK G ++ 
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA 248

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           A + F  M   + +SWNA+I+   +N + +A L+ F  M++   +P+ +++ SV  A
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA 305



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 3/231 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V  N L+  Y KS  +  A E+F  M D+  +SW+ +I G+   ++  EA   F  M  D
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD 492

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
               P+ VTF   L+ C+   +     ++HA +++ G  S   + N+L+D Y K      
Sbjct: 493 --VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A   F     KD VS+N ++ GF   G  + A+  F EM   G  P + TF A L     
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610

Query: 187 LADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
              ++ G ++ H+   K + V N+     ++DL S+   + E       MP
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMP 661


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/664 (35%), Positives = 371/664 (55%), Gaps = 37/664 (5%)

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAA 179
           R L  A RVF   P +   ++ ++I+G A+EG + + ++ F EM  +     P+ F  A 
Sbjct: 72  RGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAG 131

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L    GL D+  GR++H +++++    +V + NA+LD+Y+K      AR+ FG M + D
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 240 GVSYNVMI-TCY---------------------AWNE---------QYKESLKLFRELQF 268
             S+N++I  C                      +WN             E+L   +++  
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR 251

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                S + +S + ++        +GRQ+H + +V     +  V  SL+DMY KCG  E 
Sbjct: 252 AGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMES 311

Query: 329 AKEIFANLSHIS---TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
           A  IF   S  +      W+ M++ YVQ G  EEAL  F  M R  + A Q    S+  A
Sbjct: 312 ALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASA 371

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            A    +  G+Q+H FV + G   +    SA++DMY+KSGSL+DA + F+    +N+  W
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALW 431

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
             ++ + A +G  +  L+ F  M      P+ ++L++VLSACSH GL+ +G  YFN M +
Sbjct: 432 TTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQE 491

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           +Y + P  EHY  MVD+  R+G  D+A+  + +     + ++W +++++CR+HK++E+A+
Sbjct: 492 EYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQ 551

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
            A+++L ++E+  DA  YV MSN+YA   +W    +++ +M+ER VRK    SW+ LK+ 
Sbjct: 552 LASEKLVQLEQY-DAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNV 610

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F A D  HP++ EI   +E LM+ +K+ GY   T   +HD +EE +  SLK+HSE+L
Sbjct: 611 VHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKL 670

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF +I+TP G+ + + KNLR C DCH AIK I++ T REI VRD  RFHHFKDG CSC
Sbjct: 671 AIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSC 730

Query: 746 RDFW 749
            DFW
Sbjct: 731 EDFW 734



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 227/515 (44%), Gaps = 46/515 (8%)

Query: 14  SGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD-GGSDPD 72
           S  V +  L  A  +F+    R+  +WT +I G +++ +  +  + F +M  + G + P+
Sbjct: 66  SSSVIARGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPN 125

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
               A +L  C+         ++H  I++ G    +++CN+++D Y K      ARR F 
Sbjct: 126 AFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFG 185

Query: 133 EMPQKDSV-------------------------------SFNALITGFAKEGLNEEAIKL 161
            M QKD+                                S+N +++G  + G   EA+  
Sbjct: 186 AMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGR 245

Query: 162 FVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
             +M   G   S++T++   +    L+   LGRQ+H  VV     E+ FV  +L+D+Y K
Sbjct: 246 LQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCK 305

Query: 222 HDCVVEARKLF---GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
              +  A  +F    +  E    +++ M+  Y  N + +E+L+ FR +        QF  
Sbjct: 306 CGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFIL 365

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           +++ S  AN   ++ GRQ+H          +  +A+++VDMY+K G  E+A  IF +   
Sbjct: 366 TSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQT 425

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            +   WT M+ +Y   G    AL +F  M    I  ++ T  ++L A +    +S G   
Sbjct: 426 KNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHY 485

Query: 399 HSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-----WNALISAC 452
            + +    G + N    + ++D+Y ++G L  A    K   E N +S     W  L+SAC
Sbjct: 486 FNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKA----KNFIEENKISHEAVVWKTLLSAC 541

Query: 453 AQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSA 486
             +   +    + E +VQ   Y   S  L+S + A
Sbjct: 542 RLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYA 576



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 8/366 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N++I   ++ G+L  A +LF+    R   SW  ++ G  +     EA    
Sbjct: 187 MAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRL 246

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M   G +  +Y T++ + +      + +   Q+H  ++         +  SL+D YCK
Sbjct: 247 QQMVRAGVTFSNY-TYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCK 305

Query: 121 IRCLDLARRVF---KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
              ++ A  +F    +  +    +++ ++ G+ + G  EEA++ F  M   G     F  
Sbjct: 306 CGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFIL 365

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            +  SA      +  GRQVH FV K     +  +A+A++D+YSK   + +A ++F     
Sbjct: 366 TSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQT 425

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            +   +  M+  YA + Q + +L++F  ++  +   ++     +LS  ++   +  G   
Sbjct: 426 KNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHY 485

Query: 298 HTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFA--NLSHISTVPWTAMISAYVQK 354
                    I    +  N +VD+Y + G  ++AK       +SH   V W  ++SA    
Sbjct: 486 FNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISH-EAVVWKTLLSACRLH 544

Query: 355 GNLEEA 360
            ++E A
Sbjct: 545 KHIEYA 550



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 14/176 (7%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           + IH Q++     S   +A  L            A  +F      S   WT++IS   ++
Sbjct: 53  KAIHRQSVRGCVPSSSVIARGL----------HNAHRVFDGTPTRSLPAWTSIISGCARE 102

Query: 355 GNLEEALNLFIEM---CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           G   + +  F EM   C A  + +    A +LR  A L  +  G+++H +++RSG   +V
Sbjct: 103 GRHADGMRAFAEMLDECGAT-APNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDV 161

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
              +A+LDMYAK G    A + F  M +++  SWN +I AC Q+GD     + F++
Sbjct: 162 VLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDE 217


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/758 (33%), Positives = 411/758 (54%), Gaps = 12/758 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLAT--ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           P  +    N L++ Y + G  A   A  L + M  R AVS+ +LI  YS+      A + 
Sbjct: 30  PTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALET 89

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F   R   G   D  T+A  L+ CS          VHA  +  G  + + + NSL   Y 
Sbjct: 90  FARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYA 149

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               +  ARRVF    + D VS+N+L++G+ + G  EE +K+F  M H G   + F   +
Sbjct: 150 SCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGS 209

Query: 180 ALSAGVGLADIA--LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            +      +D+   +   VH  VVK     ++F+A+A++D+Y+K   +  A  LF  +P+
Sbjct: 210 IIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPD 269

Query: 238 VDGVSYNVMITCYAWNEQY------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
            + + +N MI  +  +E        +E+L L+ E+Q      S+F FS++L       + 
Sbjct: 270 PNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEF 329

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G+QIH Q +  +   +  + ++L+D+Y+  G  E+    F +L     V WT+MIS  
Sbjct: 330 GFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGC 389

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           VQ    E+AL LF E     +  D  T +S++ A A LA    G+Q+    I+ GF    
Sbjct: 390 VQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFT 449

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             G++ + M A+SG +    + F+EM  R++VSW+A+IS+ AQ+G A+  L+ F +M+ +
Sbjct: 450 AMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNA 509

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
              P+ V+ L+VL+ACSH GL+++GL+Y+  M  +Y L P  +H   +VD+L R+G   +
Sbjct: 510 KVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLAD 569

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           AE  +    F  D ++W S++ SCRIH ++E  +  ADQ+  +E    +A YV + N+Y 
Sbjct: 570 AEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPT-SSASYVILYNMYL 628

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG+    S+ +  M+ERGV+K    SW+EL+S VH F A D+ HP++N I +K+  ++ 
Sbjct: 629 DAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLS 688

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           +++K     D +    D     +   +  HSE++A+AF +I+ P+ +PI VMKNLR C D
Sbjct: 689 KIEKLA-NTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRD 747

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+ +KLIS    REI +RD  RFHHF+ G CSC D+W
Sbjct: 748 CHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 254/491 (51%), Gaps = 18/491 (3%)

Query: 76  FATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFK 132
           +  LL  C+  P  A     VHA I +    + L + NSL+ +YC++       A R+  
Sbjct: 5   YLDLLRSCTALPHVA----AVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLID 60

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           EMP++++VS+N LI+ +++ GL   A++ F       G +   FT+AAAL+A     D+ 
Sbjct: 61  EMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLR 120

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+ VHA  V       VF++N+L  +Y+    + EAR++F    E D VS+N +++ Y 
Sbjct: 121 TGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYV 180

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL--QIGRQIHTQTIVTTAISE 309
                +E+LK+F  +       + F   +++   A+  D+   I   +H   +     ++
Sbjct: 181 RAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDAD 240

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY------VQKGNLEEALNL 363
           + +A++++DMYAK G    A  +F ++   + + + AMI+ +      V K    EAL+L
Sbjct: 241 LFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSL 300

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           + EM    +   + TF+SILRA         GKQ+H  V++  F  + + GSAL+D+Y+ 
Sbjct: 301 YSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSD 360

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           SG ++D  + F+ +P+++IV+W ++IS C QN   +  L+ F++ +  G +PD  ++ SV
Sbjct: 361 SGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSV 420

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           ++AC+   +   G Q    +  KY          S + +  RSG  D   +   +M    
Sbjct: 421 MNACASLAVARTGEQ-IQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEME-SR 478

Query: 544 DEIMWSSVINS 554
           D + WS+VI+S
Sbjct: 479 DVVSWSAVISS 489


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/744 (33%), Positives = 422/744 (56%), Gaps = 6/744 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
            N L+S Y K+ +L+ AR LF+   ++  AV W  ++  YS   +  E  +LF +M   G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRCLDL 126
            + P+  T  + L+ C     A    ++HA ++K   ++S L +CN+L+  Y +   +  
Sbjct: 280 PA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A R+ ++M   D V++N+LI G+ +  + +EA++ F +M   G K  + +  + ++A   
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L+++  G ++HA+V+K  +  N+ V N L+D+YSK +      + F  M + D +S+  +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA N+ + E+L+LFR++   R +  +    ++L   +    + I ++IH   I+   
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH-ILRKG 517

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           + +  + N LVD+Y KC     A  +F ++     V WT+MIS+    GN  EA+ LF  
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +SAD      IL A+A L++L+ G+++H +++R GF        A++DMYA  G 
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L+ A   F  +  + ++ + ++I+A   +G  +A ++ F+ M      PD +S L++L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL++EG  +   M  +Y+L P  EHY  +VD+L R+ C  EA + +  M  EP   
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ +CR H   E  + AA +L ++E  ++    V +SN++A  G+W  V +V+  M
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEP-KNPGNLVLVSNVFAEQGRWNDVEKVRAKM 816

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCA 665
           +  G+ K    SW+E+  KVH FTA D+ HP++ EI  K+  + +++++E GY  DT   
Sbjct: 817 KASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFV 876

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LH+ DE  KV+ L  HSER+AIA+ L+ TP+ + + + KNLR C DCH   KL+SK+  R
Sbjct: 877 LHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRR 936

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           +I +RD++RFHHF+ G CSC D W
Sbjct: 937 DIVMRDANRFHHFESGLCSCGDSW 960



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 256/499 (51%), Gaps = 28/499 (5%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           FA +L  C +    ++  Q+H+ I K F    +  +   LV  Y K   LD A +VF EM
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P + + ++N +I  +   G    A+ L+  M+  G      +F A L A   L DI  G 
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF-GEMPEVDGVSYNVMITCYAWN 253
           ++H+ +VK  +    F+ NAL+ +Y+K+D +  AR+LF G   + D V +N +++ Y+ +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI-VTTAISEVKV 312
            +  E+L+LFRE+  T    + +   + L+        ++G++IH   +  +T  SE+ V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+ MY +CG+  +A+ I   +++   V W ++I  YVQ    +EAL  F +M  A  
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            +D+ +  SI+ AS  L++L  G +LH++VI+ G+ SN+  G+ L+DMY+K        +
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---- 488
            F  M +++++SW  +I+  AQN      L+ F D+ +   + D + L S+L A S    
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502

Query: 489 -------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
                  HC ++ +GL   +++ Q             +VD+  +      A ++   +  
Sbjct: 503 MLIVKEIHCHILRKGL--LDTVIQN-----------ELVDVYGKCRNMGYATRVFESIKG 549

Query: 542 EPDEIMWSSVINSCRIHKN 560
           + D + W+S+I+S  ++ N
Sbjct: 550 K-DVVSWTSMISSSALNGN 567



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 172/335 (51%), Gaps = 11/335 (3%)

Query: 268 FTRFDRSQF-----PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYA 321
           F R D S+       F+ +L +   +  +  GRQ+H++   T    E+  +A  LV MY 
Sbjct: 68  FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG 127

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           KCG  ++A+++F  +   +   W  MI AYV  G    AL L+  M    +    ++F +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER- 440
           +L+A A+L  +  G +LHS +++ G+ S  F  +AL+ MYAK+  L  A + F    E+ 
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           + V WN+++S+ + +G +  TL+ F +M  +G  P+S +++S L+AC      + G +  
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
            S+ +      +     +++ +  R G   +AE+++ QM    D + W+S+I      +N
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG--YVQN 364

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           L + K+A +    M      +  V+M++I A +G+
Sbjct: 365 LMY-KEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 45/357 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++ +S   +I+GY ++     A ELF  +  +                         
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM----------------------- 483

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                    + D +   ++L   S   +   + ++H  I++ G     +I N LVD Y K
Sbjct: 484 ---------EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGK 533

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +  A RVF+ +  KD VS+ ++I+  A  G   EA++LF  M   G           
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA   L+ +  GR++H ++++  F     +A A++D+Y+    +  A+ +F  +     
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR---QI 297
           + Y  MI  Y  +   K +++LF +++          F  LL   ++   L  GR   +I
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
                      E  V   LVDM    GR     E F  +  + T P    W A+++A
Sbjct: 714 MEHEYELEPWPEHYVC--LVDML---GRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/658 (37%), Positives = 378/658 (57%), Gaps = 38/658 (5%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  VF  + + + + +N ++ G+A       A+KL+V M  LG  P+ +TF   L +   
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVVE---- 227
                 G+Q+H  V+K  +  +++V  +L+ +Y               S H  VV     
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 228 ------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
                       A+++F E+P  D VS+N MI+ YA    YKE+L+LF+E+  T     +
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
               T+LS  A    +++GRQ+H+        S +K+ N+L+D+Y+KCG+ E A  +F  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           LS    V W  +I  Y      +EAL LF EM R+  S +  T  SIL A A L ++ +G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 396 KQLHSFVIRSGFMSNVFSG----SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           + +H ++ +   + +V +     ++L+DMYAK G ++ A Q F  M  +++ SWNA+I  
Sbjct: 319 RWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            A +G A A    F  M ++G +PD ++ + +LSACSH G ++ G   F SMTQ Y + P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           K EHY  M+D+L  SG F EA++++  MP EPD ++W S++ +CR H NLE A+  A  L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
            K+E   +   YV +SNIYA AG+W+ V++V+  +  +G++KV   S +E+ S+VH F  
Sbjct: 497 MKVEP-ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIV 555

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D+LHP+  EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF L
Sbjct: 556 GDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 615

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I+T  G+ + ++KNLR C +CH A KL+SKI  REI  RD +RFHHF+DG CSC DFW
Sbjct: 616 ISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 222/473 (46%), Gaps = 42/473 (8%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  +F ++ +   + W  ++ GY+  +    A KL+V M    G  P+  TF  LL  C+
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVM-ISLGLLPNSYTFPFLLKSCA 77

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK------------ 132
           +     E  Q+H  ++K GY   L +  SL+  Y +   L+ A +VF             
Sbjct: 78  KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137

Query: 133 -------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
                              E+P KD VS+NA+I+G+A+ G  +EA++LF EM     +P 
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           + T    LSA      + LGRQVH+++    F  N+ + NAL+DLYSK   V  A  LF 
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            +   D VS+N +I  Y     YKE+L LF+E+  +    +     ++L   A+   + I
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317

Query: 294 GRQIHTQT-----IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
           GR IH         VT A S   +  SL+DMYAKCG  E A ++F ++ H S   W AMI
Sbjct: 318 GRWIHVYIDKKLKDVTNAPS---LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGF 407
             +   G      +LF  M +  I  D  TF  +L A +    L LG+ +  S       
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDI 434

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
              +     ++D+   SG  K+A +  K MP E + V W +L+ AC ++G+ +
Sbjct: 435 TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%), Gaps = 5/362 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY  SGN+ +A+E+F+ +  +  VSW  +I GY++   ++EA +LF +
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T+LS C++  +     QVH+ I   G+ S L I N+L+D Y K  
Sbjct: 189 MMKT-NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD VS+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I +GR +H ++ K   +      +  +L+D+Y+K   +  A ++F  M     
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+N MI  +A + +      LF  ++    +     F  LLS  ++   L +GR I   
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 I+ +++    ++D+    G F+EAKE+   +      V W +++ A  + GNLE
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487

Query: 359 EA 360
            A
Sbjct: 488 LA 489



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 34/267 (12%)

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
           F  A  +FA +   + + W  M+  Y    +   AL L++ M    +  +  TF  +L++
Sbjct: 16  FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT------------ 433
            A+  +   G+Q+H  V++ G+  +++  ++L+ MYA++G L+DA +             
Sbjct: 76  CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135

Query: 434 -------------------FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
                              F E+P +++VSWNA+IS  A+ G  +  L+ F++M+++  +
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD  ++++VLSAC+    +E G Q  +S    +      +   +++D+  + G  + A  
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNL 561
           L   +  + D + W+++I     H NL
Sbjct: 255 LFEGLSCK-DVVSWNTLIGG-YTHMNL 279


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/678 (35%), Positives = 393/678 (57%), Gaps = 11/678 (1%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           ++L  C +        ++H  ++K G +  + + N+L+  Y +  C++ AR VF +M ++
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           D VS++ +I   ++    + A++L  EM  +  +PS+    + ++     A++ +G+ +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 198 AFVVKTNFVENVFV--ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           A+V++ +  E++ V    ALLD+Y+K   +  AR+LF  + +   VS+  MI     + +
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 256 YKESLKLFRELQFTRFDRSQFPFS-TLLSVVAN---KLDLQIGRQIHTQTIVTTAISEVK 311
            +E  KLF  +Q    + + FP   T+LS++        LQ+G+Q+H   +       + 
Sbjct: 279 LEEGTKLFIRMQ----EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A +LVDMY KC     A+ +F +  +   + WTAM+SAY Q   +++A NLF +M  + 
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +   + T  S+L   A   +L LGK +HS++ +     +    +AL+DMYAK G +  A 
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F E   R+I  WNA+I+  A +G  +  L  F +M + G +P+ ++ + +L ACSH G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+ EG + F  M   + L P+ EHY  MVD+L R+G  DEA +++  MP +P+ I+W ++
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+HKN +  + AA QL ++E   +    V MSNIYA A +W   + V+K M+  G+
Sbjct: 575 VAACRLHKNPQLGELAATQLLEIEP-ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 633

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K   +S +E+   VH F   D+ HPQ   I   +  + +++ + GY PDTS  L + DE
Sbjct: 634 KKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 693

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K  +L YHSE+LA+AF LI+T   +PI ++KNLR C DCHAA KL+SKI GR I VRD
Sbjct: 694 EEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 753

Query: 732 SSRFHHFKDGFCSCRDFW 749
            +RFHHF++G+CSC D+W
Sbjct: 754 RNRFHHFREGYCSCGDYW 771



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 230/489 (47%), Gaps = 49/489 (10%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           +T  L+  Y K G+L  AR+LFN +  +T VSWT +I G  + N+  E  KLF+ M+ + 
Sbjct: 234 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE- 292

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P+ +T  +L+  C          Q+HA I++ G++  L +  +LVD Y K   +  A
Sbjct: 293 NIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNA 352

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R +F     +D + + A+++ +A+    ++A  LF +M+  G +P+  T  + LS     
Sbjct: 353 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 412

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             + LG+ VH+++ K     +  +  AL+D+Y+K   +  A +LF E    D   +N +I
Sbjct: 413 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 472

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA- 306
           T +A +   +E+L +F E++      +   F  LL   ++   +  G+++  + + T   
Sbjct: 473 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 532

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFI 365
           + +++    +VD+  + G  +EA E+  ++    +T+ W A+++A               
Sbjct: 533 VPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA--------------- 577

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF---MSNVFSGSALLDMYA 422
             CR             L  + +L  L+  + L       G+   MSN+++ +   + ++
Sbjct: 578 --CR-------------LHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAA---NRWS 619

Query: 423 KSGSLKDAIQT--FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV--------QSG 472
            +  ++  ++T   K+ P  +++  N  +        +   ++   +M+        ++G
Sbjct: 620 DAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAG 679

Query: 473 YQPDSVSLL 481
           Y PD+ ++L
Sbjct: 680 YVPDTSTVL 688


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/646 (35%), Positives = 392/646 (60%), Gaps = 2/646 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G L  ARE+F+ M +R  V W +++ GY +      A  LF  MR  G  DP
Sbjct: 188 LIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASG-CDP 246

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T A  LS C+        +Q+H   +K+G    + + N+LV  Y K +CL+ A R+F
Sbjct: 247 NFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLF 306

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+ D V++N +I+G  + GL ++A++LF +MQ  G +P   T A+ L A   L    
Sbjct: 307 GLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFK 366

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H ++V+     +VF+ +AL+D+Y K   V  A+ +F     +D V  + MI+ Y 
Sbjct: 367 QGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYV 426

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   + ++K+FR L       +    ++ L   A+   ++IG+++H   +         
Sbjct: 427 LNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCY 486

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++L+DMY+KCGR + +  +F+ +S    V W +MIS++ Q G  EEAL+LF +M    
Sbjct: 487 VESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEG 546

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  +  T +SIL A A L ++  GK++H  +I+    +++F+ SAL+DMY K G+L+ A+
Sbjct: 547 VKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELAL 606

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ MPE+N VSWN++ISA   +G  + ++     M + G++ D V+ L+++SAC+H G
Sbjct: 607 RVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAG 666

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EGL+ F  MT++Y + P+ EH + MVD+  R+G  D+A + +A MPF+PD  +W ++
Sbjct: 667 QVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGAL 726

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++CR+H+N+E A+ A+ +LFK++   +   YV MSNI AVAG+W+ VS++++ M+++ V
Sbjct: 727 LHACRVHRNVELAEIASQELFKLDP-HNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKV 785

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
           +K+  YSWV++ +  H+F A D+ HP + EI   +++L+ E+K+EG
Sbjct: 786 QKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEG 831



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 187/691 (27%), Positives = 329/691 (47%), Gaps = 35/691 (5%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFK 58
           P    + T  L+  YV +     A  +F+S+       A+ W  LI G++     R A  
Sbjct: 73  PGPAALQTR-LVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVL 131

Query: 59  LFVDMRTDGGSD-PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
            +V M     S  PD  T   ++  C+     +    VH      G +  + + ++L+  
Sbjct: 132 FYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKM 191

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y     LD AR VF  M ++D V +N ++ G+ K G    A+ LF  M+  G  P+  T 
Sbjct: 192 YADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATL 251

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A  LS     AD+  G Q+H   VK      V VAN L+ +Y+K  C+ EA +LFG MP 
Sbjct: 252 ACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPR 311

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V++N MI+    N    ++L+LF ++Q +         ++LL  +      + G++I
Sbjct: 312 DDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEI 371

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +   A  +V + ++LVD+Y KC     A+ +F     I  V  + MIS YV     
Sbjct: 372 HGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMS 431

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E A+ +F  +    I  +    AS L A A +A++ +G++LH +V+++ +    +  SAL
Sbjct: 432 EAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESAL 491

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMY+K G L  +   F +M  ++ V+WN++IS+ AQNG+ +  L  F  M+  G + ++
Sbjct: 492 MDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNN 551

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           V++ S+LSAC+    I  G +  + +  K  +R      ++++D+  + G  + A ++  
Sbjct: 552 VTISSILSACAGLPAIYYG-KEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFE 610

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK---LRDAAPYVAMSNIYAVAG 594
            MP E +E+ W+S+I++   H      K++ D L  M++     D   ++A+ +  A AG
Sbjct: 611 HMP-EKNEVSWNSIISAYGAHG---LVKESVDLLCCMQEEGFKADHVTFLALISACAHAG 666

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           Q +   ++ + M E             ++ +V   +   +L+ +      K++  MQ + 
Sbjct: 667 QVQEGLRLFRCMTEE----------YHIEPQVEHLSCMVDLYSRAG----KLDKAMQFIA 712

Query: 655 KEGYKPDT--------SCALHDEDEEIKVES 677
              +KPD         +C +H   E  ++ S
Sbjct: 713 DMPFKPDAGIWGALLHACRVHRNVELAEIAS 743



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 12/194 (6%)

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-----LLDMYAKSG 425
           N S       ++LR     + L LG ++H+  + SG +     G A     L+ MY  + 
Sbjct: 31  NASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLAR 90

Query: 426 SLKDAIQTFKEMPE---RNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSL 480
             +DA+  F  +P       + WN LI      G  +  +  +  M    S  +PD  +L
Sbjct: 91  RFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTL 150

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
             V+ +C+  G +  G +  +  T+   L       ++++ +   +G  D A ++   M 
Sbjct: 151 PYVVKSCAALGALHLG-RLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMD 209

Query: 541 FEPDEIMWSSVINS 554
            E D ++W+ +++ 
Sbjct: 210 -ERDCVLWNVMMDG 222


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/792 (33%), Positives = 418/792 (52%), Gaps = 57/792 (7%)

Query: 13  ISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           +  Y++ G  A A  L   ++    T   W  LI    +     +    +  M+  G   
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWL- 124

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD+ TF  +L  C E  +      VHA +   G  S + ICNS+V  Y +   LD A ++
Sbjct: 125 PDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQM 184

Query: 131 FKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQH---LGFKPSDFTFAAALSAG 184
           F E+ ++   D VS+N+++  + + G +  A+++   M +   L  +P   T    L A 
Sbjct: 185 FDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC 244

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  +  G+QVH F V+   V++VFV NAL+ +Y+K   + EA K+F  + + D VS+N
Sbjct: 245 ASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWN 304

Query: 245 VMITCYA--------------------------WNEQYK---------ESLKLFRELQFT 269
            M+T Y+                          W+             E+L +FR++Q  
Sbjct: 305 AMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY 364

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT-------AISEVKVANSLVDMYAK 322
             + +    ++LLS  A+   L  G+Q H   I             ++ V N L+DMYAK
Sbjct: 365 GLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAK 424

Query: 323 CGRFEEAKEIFANL--SHISTVPWTAMISAYVQKGNLEEALNLFIEMCR--ANISADQAT 378
           C  +  A+ IF ++     + V WT MI  Y Q G   +AL LF ++ +   ++  +  T
Sbjct: 425 CKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFT 484

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNV-FSGSALLDMYAKSGSLKDAIQTFKEM 437
            +  L A A L  L LG+QLH++ +R+   S V + G+ L+DMY+KSG +  A   F  M
Sbjct: 485 LSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM 544

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             RN+VSW +L++    +G  +  L  F+ M + G+  D ++ L VL ACSH G++++G+
Sbjct: 545 KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGM 604

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YF+ M + + + P  EHYA MVD+L R+G  +EA +L+  M  EP  ++W +++++ RI
Sbjct: 605 IYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRI 664

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           H N+E  + AA +L ++    D + Y  +SN+YA A +W+ V++++  M+  G+RK    
Sbjct: 665 HANIELGEYAASKLTELGAENDGS-YTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGC 723

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW++ K     F   D  HP++ +I   + +L++ +K  GY P TS ALHD D+E K + 
Sbjct: 724 SWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDL 783

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           L  HSE+LA+A+ ++ T  G PI + KNLR C DCH+A+  IS I   EI +RDSSRFHH
Sbjct: 784 LFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHH 843

Query: 738 FKDGFCSCRDFW 749
           FK G CSCR +W
Sbjct: 844 FKKGSCSCRSYW 855



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 185/397 (46%), Gaps = 48/397 (12%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-- 67
           N L+S Y K   +  A ++F  +  +  VSW  ++ GYSQ   F  A  LF  M+ +   
Sbjct: 273 NALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIK 332

Query: 68  --------------------------------GSDPDYVTFATLLSGCSEPDTANELIQV 95
                                           G +P+ VT A+LLSGC+         Q 
Sbjct: 333 LDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQT 392

Query: 96  HADIIK----FGYNSI---LIICNSLVDSYCKIRCLDLARRVFKEMPQKDS--VSFNALI 146
           HA +IK      +N     L++ N L+D Y K +   +AR +F  +  KD   V++  +I
Sbjct: 393 HAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMI 452

Query: 147 TGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT- 203
            G+A+ G   +A+KLF ++  Q    KP+ FT + AL A   L ++ LGRQ+HA+ ++  
Sbjct: 453 GGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNE 512

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
           N  E ++V N L+D+YSK   +  AR +F  M   + VS+  ++T Y  + + +E+L LF
Sbjct: 513 NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLF 572

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAK 322
            ++Q   F      F  +L   ++   +  G       +    I+   +    +VD+  +
Sbjct: 573 DQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGR 632

Query: 323 CGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNLE 358
            GR  EA E+  N+S   T V W A++SA     N+E
Sbjct: 633 AGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIE 669



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 31/182 (17%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N V+  ++I GY + G    A +LF  +              + QK   +        
Sbjct: 442 DKNVVTWTVMIGGYAQHGEANDALKLFAQI--------------FKQKTSLK-------- 479

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS-ILIICNSLVDSYCKI 121
                   P+  T +  L  C+         Q+HA  ++    S +L + N L+D Y K 
Sbjct: 480 --------PNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKS 531

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D AR VF  M  ++ VS+ +L+TG+   G  EEA+ LF +MQ LGF     TF   L
Sbjct: 532 GDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVL 591

Query: 182 SA 183
            A
Sbjct: 592 YA 593


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/634 (38%), Positives = 378/634 (59%), Gaps = 42/634 (6%)

Query: 156 EEAIKLF---------VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
           EE I+LF         V+  H   +PS   ++  ++A +    + LG++VHA    +NF+
Sbjct: 36  EEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFI 95

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA--------------- 251
             + ++N L+ +Y+K   +V+A+ LF E+P+ D  S+N MI+ YA               
Sbjct: 96  PGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM 155

Query: 252 -------WNE---------QYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIG 294
                  WN           Y E+L LFR +Q       + F  S+ L+  A    L+ G
Sbjct: 156 PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRG 215

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           ++IH   I +    +  V  +L+D+Y KCG   EA+ IF  ++    V WT MI    + 
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFED 275

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  +E  +LF ++  + +  ++ TFA +L A A+LA+  +GK++H ++ R G+    F+ 
Sbjct: 276 GRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAA 335

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           SAL+ +Y+K G+ + A + F +MP  ++VSW +LI   AQNG     L+ FE +++SG +
Sbjct: 336 SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTK 395

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD ++ + VLSAC+H GL++ GL+YF+S+ +K+ L    +HYA ++D+L RSG F EAE 
Sbjct: 396 PDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAEN 455

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++  MP +PD+ +W+S++  CRIH N+E A++AA  LF++E   + A Y+ +SNIYA AG
Sbjct: 456 IIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEP-ENPATYITLSNIYANAG 514

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
            W   ++V+  M  RG+ K    SW+E+K +VHVF   D  HP+ ++I   +  L ++MK
Sbjct: 515 LWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMK 574

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           +EGY  DT+  LHD +EE K +++ YHSE+LA+AF +I+T  G+PI V KNLR C DCH 
Sbjct: 575 EEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHN 634

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           A+K ISKI  R+I VRDS+RFH F DG CSC+D+
Sbjct: 635 AMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 227/499 (45%), Gaps = 50/499 (10%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           + Q+N+ +EA      +       P    ++TL++ C          +VHA      +  
Sbjct: 42  FCQQNRLKEAVDYLHRI-----PQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIP 96

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            ++I N L+  Y K   L  A+ +F E+PQKD  S+N +I+G+A  G  E+A KLF EM 
Sbjct: 97  GIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMP 156

Query: 167 HLGFKPSDFTFAAALSAGV--GLADIAL-------------------------------- 192
           H      +F++ A +S  V  G    AL                                
Sbjct: 157 HR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSL 212

Query: 193 --GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+++H +++++    +  V  ALLDLY K   + EAR +F +M + D VS+  MI   
Sbjct: 213 RRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRC 272

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             + + KE   LFR+L  +    +++ F+ +L+  A+    Q+G+++H            
Sbjct: 273 FEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS 332

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             A++LV +Y+KCG  E A+ +F  +     V WT++I  Y Q G  + AL  F  + R+
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392

Query: 371 NISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
               D+ TF  +L A      + +G +  HS   + G +      + ++D+ A+SG  K+
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452

Query: 430 AIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC- 487
           A      MP + +   W +L+  C  +G+ +   ++ + + +   +P++ +    LS   
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE--LEPENPATYITLSNIY 510

Query: 488 SHCGLIEEGLQYFNSMTQK 506
           ++ GL  E  +  N M  +
Sbjct: 511 ANAGLWTEETKVRNDMDNR 529



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 181/362 (50%), Gaps = 2/362 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++  S N +ISGY   G +  AR+LF+ M  R   SW  +I GY  +  + EA  LF
Sbjct: 124 IPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLF 183

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +  S+ +  T ++ L+  +   +     ++H  +I+ G     ++  +L+D Y K
Sbjct: 184 RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGK 243

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ AR +F +M  KD VS+  +I    ++G  +E   LF ++   G +P+++TFA  
Sbjct: 244 CGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGV 303

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   LA   +G++VH ++ +  +    F A+AL+ +YSK      AR++F +MP  D 
Sbjct: 304 LNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDL 363

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHT 299
           VS+  +I  YA N Q   +L+ F  L  +     +  F  +LS   +   + IG +  H+
Sbjct: 364 VSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHS 423

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                  +        ++D+ A+ GRF+EA+ I  N+        W +++      GN+E
Sbjct: 424 VKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIE 483

Query: 359 EA 360
            A
Sbjct: 484 LA 485


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 357/578 (61%), Gaps = 2/578 (0%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+   + + ++A     ++   R++HA +  + F  + F+ N+L+ +Y K   V++AR +
Sbjct: 49  PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +M   D VS+  +I  YA N+   E++ L   +   RF  + F F++LL       D 
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             GRQIH   +      +V V ++L+DMYA+CG+ + A  +F  L   + V W A+IS +
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            +KG+ E AL  F EM R    A   T++S+  + A L +L  GK +H+ VI+S      
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA 288

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F G+ LLDMYAKSGS+ DA + F  +  +++V+WN++++A AQ G  +  +  FE+M +S
Sbjct: 289 FVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G   + ++ L +L+ACSH GL++EG +YF  M ++Y L P+ +HY ++V +L R+G  + 
Sbjct: 349 GVYLNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTVVALLGRAGLLNY 407

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D+ P V + NIYA
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP-DDSGPPVLLYNIYA 466

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             GQW++ ++V+  M+  GV+K  A SWVE+++ VH+F AND+ HPQ  EI +    + +
Sbjct: 467 STGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISK 526

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           +++KEGY PD    L   D++ K  +L+YHSE+LA+AFALI  P G+ I +MKN+R C D
Sbjct: 527 KIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGD 586

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+A K ISK+ GREI VRD++RFHHF  G CSC D+W
Sbjct: 587 CHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 210/400 (52%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G   P    + + ++ C++     +  ++HA +    +     + NSL+  YCK
Sbjct: 39  LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +  AR VF +M +KD VS+ +LI G+A+  +  EAI L   M    FKP+ FTFA+ 
Sbjct: 99  CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A    AD   GRQ+HA  VK  + E+V+V +ALLD+Y++   +  A  +F ++   +G
Sbjct: 159 LKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I+ +A     + +L  F E+    F+ + F +S++ S +A    L+ G+ +H  
Sbjct: 219 VSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAH 278

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +       V N+L+DMYAK G   +A+++F  + +   V W +M++A+ Q G  +EA
Sbjct: 279 VIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++ F EM ++ +  +Q TF  IL A +    +  GK+    +        +     ++ +
Sbjct: 339 VSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVAL 398

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G L  A+    +MP E     W AL++AC  + +A+
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 160/287 (55%), Gaps = 1/287 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K  ++  AR +F+ M  +  VSWT LI GY+Q +   EA  L   M   G  
Sbjct: 90  NSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGM-LKGRF 148

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL        +    Q+HA  +K G++  + + ++L+D Y +   +D+A  
Sbjct: 149 KPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATA 208

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI+GFA++G  E A+  F EM   GF+ + FT+++  S+   L  
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGA 268

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA V+K+      FV N LLD+Y+K   +++ARK+F  +   D V++N M+T 
Sbjct: 269 LEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTA 328

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           +A     KE++  F E++ +    +Q  F  +L+  ++   ++ G++
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/715 (35%), Positives = 380/715 (53%), Gaps = 75/715 (10%)

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
           +   SLV +Y     L  A   F  +PQ  +D+V  NA+I+ +A+      A+ +F  + 
Sbjct: 89  VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148

Query: 167 HLG-FKPSDFTFAAALSAGVGLADIALGR--QVHAFVVKTNFVENVFVANALLDLYSKHD 223
             G  +P D++F A LSA   L +I++    Q+   V+K+     + V+NAL+ LY K +
Sbjct: 149 ASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208

Query: 224 CV---VEARKLFGEMPEVDGVSYNVMITCYA----------------------WNEQYK- 257
            +    +ARK+  EMP+ D +++  M+  Y                       WN     
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268

Query: 258 --------ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT--IVTTAI 307
                   E+ +LFR +   R    +F F+++LS  AN      G+ +H Q   +    +
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFV 328

Query: 308 SE--VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA------------------- 346
            E  + V N+LV +Y+KCG    A+ IF N+     V W                     
Sbjct: 329 PEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFE 388

Query: 347 ------------MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
                       M+S YV  G  E+AL LF  M   ++     T+A  + A  EL SL  
Sbjct: 389 EMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKH 448

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GKQLH  +++ GF  +  +G+AL+ MYA+ G++K+A   F  MP  + VSWNA+ISA  Q
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G  +  L+ F+ MV  G  PD +S L+VL+AC+H GL++EG QYF SM + + + P ++
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGED 568

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  ++D+L R+G   EA  L+  MPFEP   +W ++++ CR   ++E    AADQLFKM
Sbjct: 569 HYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKM 628

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
               D   Y+ +SN Y+ AG+W   ++V+K MR+RGV+K    SW+E  +KVHVF   D 
Sbjct: 629 TPQHDGT-YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDT 687

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP+ +++ + +E +   M+K GY PDT   LHD +   K   L  HSERLA+ F L+  
Sbjct: 688 KHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKL 747

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P G+ + V+KNLR C DCHA +  +SK  GREI VRD  RFHHFKDG CSC ++W
Sbjct: 748 PPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 182/396 (45%), Gaps = 40/396 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ ++   ++ GYV+ G++  AR +F  +  +  V W  +I GY       EAF+LF
Sbjct: 223 MPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELF 282

Query: 61  VDMRTDGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------ 107
             M  +    P D  TF ++LS C+          VH  I +   N +            
Sbjct: 283 RRMVLE--RVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALV 340

Query: 108 -----------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                                  ++  N+++  Y +  CLD A  VF+EMP K+ +S+  
Sbjct: 341 TLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMV 400

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +++G+   G +E+A+KLF  M+    KP D+T+A A+SA   L  +  G+Q+H  +V+  
Sbjct: 401 MVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLG 460

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  +    NAL+ +Y++   V EA  +F  MP +D VS+N MI+    +   +E+L+LF 
Sbjct: 461 FEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFD 520

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKC 323
            +        +  F T+L+   +   +  G Q   +       I        L+D+  + 
Sbjct: 521 RMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRA 580

Query: 324 GRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           GR  EA+++   +    T   W A++S     G++E
Sbjct: 581 GRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDME 616


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/659 (35%), Positives = 383/659 (58%), Gaps = 2/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L Q+HA ++  G      +    V++   I  +  AR+VF E P+     +NA+I G++
Sbjct: 86  HLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYS 145

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                 +AI+++  MQ  G  P  FT    L A  G+  + +G++VH  + +  F  +VF
Sbjct: 146 SHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVF 205

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N L+ LY+K   V +AR +F  + + + VS+  MI+ Y  N    E+L++F +++   
Sbjct: 206 VQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRN 265

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                    ++L    +  DL+ G+ IH   +      E  +  SL  MYAKCG+   A+
Sbjct: 266 VKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVAR 325

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  +   + + W AMIS Y + G   EA+ LF EM   NI  D  T  S + A A++ 
Sbjct: 326 SFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL L K +  ++ ++ + ++VF  +AL+DM+AK GS+  A + F    ++++V W+A+I 
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIV 445

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               +G  Q  +  F  M Q+G  P+ V+ + +L+AC+H GL+EEG + F+SM + Y + 
Sbjct: 446 GYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIE 504

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
            + +HYA +VD+L RSG  +EA   +  MP EP   +W +++ +C+I++++   + AA+Q
Sbjct: 505 ARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQ 564

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF ++   +   YV +SN+YA +  W+SV++V+  MRE+G+ K   YS +E+  K+  F 
Sbjct: 565 LFSLDPF-NTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFR 623

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D+ HP+  EI  ++E+L + +K+ G+ P     LHD ++E K E+L  HSERLAIA+ 
Sbjct: 624 VGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYG 683

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+ + + KNLRAC +CH+A KLISK+  REI VRD++RFHHFK+G CSCRD+W
Sbjct: 684 LISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 219/463 (47%), Gaps = 16/463 (3%)

Query: 5   NTVSTNMLISGYVKSGNLAT--------------ARELFNSMVDRTAVSWTILIGGYSQK 50
           N +   +++SG V+SG L T              AR++F+   + +   W  +I GYS  
Sbjct: 88  NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSH 147

Query: 51  NQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII 110
           N F +A +++  M+  G  +PD  T   +L  CS         +VH  I + G+ S + +
Sbjct: 148 NFFGDAIEMYSRMQASG-VNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206

Query: 111 CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF 170
            N LV  Y K   ++ AR VF+ +  ++ VS+ ++I+G+ + GL  EA+++F +M+    
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           KP      + L A   + D+  G+ +H  VVK        +  +L  +Y+K   V+ AR 
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
            F +M   + + +N MI+ YA N    E++ LF+E+             + +   A    
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L + + +      T   ++V V  +L+DM+AKCG  + A+E+F        V W+AMI  
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y   G  ++A++LF  M +A +  +  TF  +L A      +  G +L   +   G  + 
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEAR 506

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
               + ++D+  +SG L +A      MP E  +  W AL+ AC
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC 549


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/578 (38%), Positives = 358/578 (61%), Gaps = 2/578 (0%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+   + A ++A     ++   R++H  +  + F  + F+ N+L+ LY K   VVEA K+
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +M + D VS+  +I  YA N+   E++ L   +   RF  + F F++LL       D 
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            IG QIH   +      +V V ++L+DMYA+CG+ + A  +F  L   + V W A+IS +
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            +KG+ E AL +F EM R    A   T++SI    A + +L  GK +H+ +++S      
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA 288

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F G+ +LDMYAKSGS+ DA + F+ +  +++V+WN++++A AQ G  +  +  FE+M +S
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G   + ++ L +L+ACSH GL++EG  YF+ M ++Y L P+ EHY ++VD+L R+G  + 
Sbjct: 349 GIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D+ P V + NIYA
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP-DDSGPPVLLYNIYA 466

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G W++ ++V+K M+  GV+K  A SWVE+ + VH+F AND+ HP+  EI +  + +  
Sbjct: 467 STGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISM 526

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           +++KEGY PD    L   DE+ +  +L+YHSE++A+AFALI  P G+ I +MKN+R C D
Sbjct: 527 KIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGD 586

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+A K ISK+  REI VRD++RFHHF +G CSC D+W
Sbjct: 587 CHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 210/400 (52%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D    G   P    +   ++ C++    ++  ++H  +    +     + NSL+  YCK
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A +VF +M +KD VS+ +LI G+A+  +  EAI L   M    FKP+ FTFA+ 
Sbjct: 99  CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A    AD  +G Q+HA  VK ++ E+V+V +ALLD+Y++   +  A  +F ++   +G
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I+ +A     + +L +F E+Q   F+ + F +S++ S +A    L+ G+ +H  
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAH 278

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            + +       V N+++DMYAK G   +A+++F  + +   V W +M++A+ Q G  +EA
Sbjct: 279 MVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++ F EM ++ I  +Q TF  IL A +    +  GK     +        +     ++D+
Sbjct: 339 VSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDL 398

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G L  A+    +MP E     W AL++AC  + +A+
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 181/342 (52%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G++  A ++F+ M  +  VSWT LI GY+Q +   EA  L   M   G  
Sbjct: 90  NSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGM-LKGRF 148

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL        +    Q+HA  +K  ++  + + ++L+D Y +   +D+A  
Sbjct: 149 KPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATA 208

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI+GFA++G  E A+ +F EMQ  GF+ + FT+++  S   G+  
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGA 268

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA +VK+      FV N +LD+Y+K   +++ARK+F  +   D V++N M+T 
Sbjct: 269 LEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A     KE++  F E++ +    +Q  F  +L+  ++   ++ G+             E
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPE 388

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           ++   ++VD+  + G    A   IF      +   W A+++A
Sbjct: 389 IEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/659 (35%), Positives = 364/659 (55%), Gaps = 1/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L  +HA +++ G +    + N ++         + + R+  +  + +   FN +I G  
Sbjct: 25  HLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLV 84

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                +E+I+++  M+  G  P  FTF   L A   + D  LG ++H+ VVK     + F
Sbjct: 85  LNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAF 144

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V  +L++LY+K   +  A K+F ++P+ +  S+   I+ Y    + +E++ +FR L    
Sbjct: 145 VKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                F    +LS      DL+ G  I         +  V VA +LVD Y KCG  E A+
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   + V W++MI  Y   G  +EAL+LF +M    +  D      +L + A L 
Sbjct: 265 SVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLG 324

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L LG    + +  + F+ N   G+AL+DMYAK G +  A + F+ M +++ V WNA IS
Sbjct: 325 ALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A +G  +  L  F  M +SG +PD  + + +L AC+H GL+EEG +YFNSM   + L 
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLT 444

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ EHY  MVD+L R+GC DEA +L+  MP E + I+W +++  CR+H++ +  +    +
Sbjct: 445 PEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKK 504

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           L  +E    +  YV +SNIYA + +WE  ++++  M ERGV+K+  YSW+E+   VH F 
Sbjct: 505 LIALEPWH-SGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFL 563

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D  HP + +I  K+  L +++K  GY P T   L D +EE K   +  HSE+LA+AF 
Sbjct: 564 VGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFG 623

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T     ILV+KNLR C DCH AIK IS+I GREI VRD++RFH F DG CSC+D+W
Sbjct: 624 LISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 231/490 (47%), Gaps = 4/490 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++T   N ++      GN   +  + +   +     +  +I G    + F+E+ +++  
Sbjct: 39  DEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHS 98

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR +G S PD  TF  +L  C+    +   +++H+ ++K G  +   +  SL++ Y K  
Sbjct: 99  MRKEGLS-PDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCG 157

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D A +VF ++P K+  S+ A I+G+   G   EAI +F  +  +G +P  F+    LS
Sbjct: 158 FIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLS 217

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A     D+  G  +  ++ +   V NVFVA AL+D Y K   +  AR +F  M E + VS
Sbjct: 218 ACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVS 277

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MI  YA N   KE+L LF ++         +    +L   A    L++G        
Sbjct: 278 WSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLIN 337

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +    +  +L+DMYAKCGR + A E+F  +     V W A IS     G++++AL 
Sbjct: 338 GNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALG 397

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF +M ++ I  D+ TF  +L A      +  G++  +S          +     ++D+ 
Sbjct: 398 LFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLL 457

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVS 479
            ++G L +A Q  K MP E N + W AL+  C  + D Q      + ++    +   +  
Sbjct: 458 GRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYV 517

Query: 480 LLSVLSACSH 489
           LLS + A SH
Sbjct: 518 LLSNIYAASH 527


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/740 (34%), Positives = 409/740 (55%), Gaps = 83/740 (11%)

Query: 11  MLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           +LI  ++ +  L  ARE+F+ +       +T +I GY++ N+  +A  LF +M       
Sbjct: 40  VLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLR---- 95

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
            D V++ +++SGC E                         C  +          D A ++
Sbjct: 96  -DVVSWNSMISGCVE-------------------------CGDI----------DTAVKM 119

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F EMP++  VS+ A++ G  + G+ ++A +LF +M                         
Sbjct: 120 FDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMP------------------------ 155

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
                          V+++   NA++  Y +   V +A KLF +MP  + +S+  MI   
Sbjct: 156 ---------------VKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGL 200

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             NE+  E+L LF+ +       +   F+ +++  AN     +G Q+H   I +  + E 
Sbjct: 201 DQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEE 260

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  SL+ +YA C R E+++++F  + H     WTA++S Y      E+ALN+F EM R 
Sbjct: 261 YVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRN 320

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           +I  +Q+TFAS L + + L +L  GK++H   ++ G  +  F G++L+ MY+ SG++ DA
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDA 380

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           +  F E+ +++IVSWN++I  CAQ+G  +     F  M++   +PD ++   +LSACSHC
Sbjct: 381 VSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440

Query: 491 GLIEEGLQYFNSMTQKYK-LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           G +++G + F  ++     +  K +HY  MVDIL R G   EAEKL+  M  +P+E++W 
Sbjct: 441 GFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWL 500

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR+H +++  +KAA  +F ++  + +A YV +SNIYA AG+W SVS+++  M+++
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDS-KSSAAYVLLSNIYASAGRWSSVSKLRVKMKQK 559

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+ K    SWV ++ K H F + D   P    I  K+E L +++K+ GY PD   ALHD 
Sbjct: 560 GIMKKPGSSWVVIRGKKHEFFSGDR--PHCLRIFEKLEFLREKLKELGYVPDYRSALHDV 617

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           ++E K E L YHSERLAIAF LINT EGS + VMKNLR C DCH  IKLIS++ G +I +
Sbjct: 618 EDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVL 677

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD +RFHHFK+G CSC D+W
Sbjct: 678 RDPTRFHHFKNGMCSCGDYW 697



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 219/461 (47%), Gaps = 45/461 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +ISG V+ G++ TA ++F+ M +R+ VSWT ++ G  +     +A +LF
Sbjct: 92  MPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLF 151

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M                                  DI  +         N++V  Y +
Sbjct: 152 CQMPVK-------------------------------DIAAW---------NAMVHGYLQ 171

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A ++FK+MP+K+ +S+  +I G  +   + EA+ LF  M     K +  TF   
Sbjct: 172 FGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCV 231

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A        +G QVH F++K+ F+   +V  +L+ LY+      ++RK+FGEM     
Sbjct: 232 ITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKV 291

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
             +  +++ Y+ N +++++L +F E+       +Q  F++ L+  +    L  G++IH  
Sbjct: 292 AVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGV 351

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +     +   V NSLV MY+  G   +A  +F  +   S V W ++I    Q G  + A
Sbjct: 352 AVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWA 411

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM---SNVFSGSAL 417
             +F +M R N   D+ TF  +L A +    L  G++L  + I SG       +   + +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLF-YYISSGLNHIDRKIQHYTCM 470

Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
           +D+  + G LK+A +  + M  + N + W AL+SAC  + D
Sbjct: 471 VDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSD 511



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/315 (20%), Positives = 137/315 (43%), Gaps = 42/315 (13%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV + N L++      R +EA+E+F  +       +T MIS Y +   L +ALNLF EM 
Sbjct: 39  EVLICNHLLNR-----RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEM- 92

Query: 369 RANISADQATFASILRASAELASLSLGKQL------HSFVIRSGFMSNVF---------- 412
                 D  ++ S++    E   +    ++       S V  +  ++  F          
Sbjct: 93  ---PLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAER 149

Query: 413 -----------SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
                      + +A++  Y + G + DA++ FK+MP +N++SW  +I    QN  +   
Sbjct: 150 LFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEA 209

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASM 519
           L  F++M++   +  S +   V++AC++      G Q    + +   L    E Y  AS+
Sbjct: 210 LNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFL---YEEYVTASL 266

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           + +       +++ K+  +M  E   + W+++++   +++  E A     ++ +   L +
Sbjct: 267 ITLYANCKRTEDSRKVFGEMVHEKVAV-WTALLSGYSLNRKHEDALNVFSEMIRNSILPN 325

Query: 580 AAPYVAMSNIYAVAG 594
            + + +  N  +  G
Sbjct: 326 QSTFASGLNSCSALG 340


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/708 (36%), Positives = 394/708 (55%), Gaps = 20/708 (2%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NS 106
           S+  +  EAF+   +M   G S   Y ++  L   C E  + +    +H D ++ G  N 
Sbjct: 59  SKHRKLNEAFEFLQEMDKAGVSVSSY-SYQCLFEACRELRSLSHGRLLH-DRMRMGIENP 116

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            +++ N ++  YC+ R L+ A ++F EM + ++VS   +I+ +A++G+ ++A+ LF  M 
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G KP    +   L + V    +  GRQ+HA V++     N  +   ++++Y K   +V
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A+++F +M     V+   ++  Y    + +++LKLF +L     +   F FS +L   A
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +  +L +G+QIH         SEV V   LVD Y KC  FE A   F  +   + V W+A
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRS 405
           +IS Y Q    EEA+  F  +   N S  +  T+ SI +A + LA  ++G Q+H+  I+ 
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
             + + +  SAL+ MY+K G L DA + F+ M   +IV+W A IS  A  G+A   L+ F
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E MV  G +P+SV+ ++VL+ACSH GL+E+G    ++M +KY + P  +HY  M+DI  R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           SG  DEA K M  MPFEPD + W   ++ C  HKNLE  + A ++L +++   D A YV 
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDP-EDTAGYVL 595

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
             N+Y  AG+WE  +++ K M ER ++K  + SW++ K K+H F   D+ HPQT EI  K
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI----NTPEGSPIL 701
           ++     M+ + ++    C + +  E+     L  HSERLAIAF LI    N P  +PI 
Sbjct: 656 LKEFDGFMEGDMFQ----CNMTERREQ-----LLDHSERLAIAFGLISVHGNAP--APIK 704

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V KNLRAC DCH   K +S +TG EI +RDS RFHHFK+G CSC D+W
Sbjct: 705 VFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 228/455 (50%), Gaps = 4/455 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N + +  N ++  Y +  +L  A +LF+ M +  AVS T +I  Y+++    +A  LF
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M   G   P  + + TLL     P   +   Q+HA +I+ G  S   I   +V+ Y K
Sbjct: 173 SGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A+RVF +M  K  V+   L+ G+ + G   +A+KLFV++   G +   F F+  
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   L ++ LG+Q+HA V K      V V   L+D Y K      A + F E+ E + 
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHT 299
           VS++ +I+ Y    Q++E++K F+ L+       + F ++++    +   D  IG Q+H 
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I  + I      ++L+ MY+KCG  ++A E+F ++ +   V WTA IS +   GN  E
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALL 418
           AL LF +M    +  +  TF ++L A +    +  GK  L + + +      +     ++
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           D+YA+SG L +A++  K MP E + +SW   +S C
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 182/357 (50%), Gaps = 4/357 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT     +++ YVK G L  A+ +F+ M  +  V+ T L+ GY+Q  + R+A KLFVD+ 
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           T+ G + D   F+ +L  C+  +  N   Q+HA + K G  S + +   LVD Y K    
Sbjct: 278 TE-GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF 336

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP-SDFTFAAALSA 183
           + A R F+E+ + + VS++A+I+G+ +    EEA+K F  ++       + FT+ +   A
Sbjct: 337 ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQA 396

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LAD  +G QVHA  +K + + + +  +AL+ +YSK  C+ +A ++F  M   D V++
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTI 302
              I+ +A+     E+L+LF ++       +   F  +L+  ++   ++ G+  + T   
Sbjct: 457 TAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                  +   + ++D+YA+ G  +EA +   N+      + W   +S      NLE
Sbjct: 517 KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 2/311 (0%)

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N+ +   + + +  E+ +  +E+       S + +  L         L  GR +H +  +
Sbjct: 52  NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 V + N ++ MY +C   E+A ++F  +S ++ V  T MISAY ++G L++A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  M  +      + + ++L++     +L  G+Q+H+ VIR+G  SN    + +++MY K
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G L  A + F +M  +  V+   L+    Q G A+  LK F D+V  G + DS     V
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L AC+    +  G Q  ++   K  L  +      +VD   +   F+ A +   ++  EP
Sbjct: 292 LKACASLEELNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EP 349

Query: 544 DEIMWSSVINS 554
           +++ WS++I+ 
Sbjct: 350 NDVSWSAIISG 360


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/813 (32%), Positives = 428/813 (52%), Gaps = 66/813 (8%)

Query: 1   MPNQNTVSTNMLISG----YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA 56
           +P++  +S   L +G    Y+  G    A  +   +    AV W +LI  + ++ +   A
Sbjct: 80  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +   M    G+ PD+ T   +L  C E  +       H  I   G+ S + ICN+LV 
Sbjct: 140 INVSCRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVA 198

Query: 117 SYCKIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF-KP 172
            Y +   L+ A  +F E+ Q+   D +S+N++++   K      A+ LF +M  +   KP
Sbjct: 199 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 258

Query: 173 SD-----FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           ++      +    L A   L  +   ++VH   ++     +VFV NAL+D Y+K   +  
Sbjct: 259 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 318

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYK------------------------------ 257
           A K+F  M   D VS+N M+  Y+ +  ++                              
Sbjct: 319 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 378

Query: 258 -----ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS---- 308
                E+L LFR++ F+    +     ++LS  A+      G +IH  ++    ++    
Sbjct: 379 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 438

Query: 309 ------EVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEA 360
                 ++ V N+L+DMY+KC  F+ A+ IF +  L   + V WT MI  + Q G+  +A
Sbjct: 439 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 498

Query: 361 LNLFIEMCRA--NISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
           L LF+EM      ++ +  T + IL A A LA++ +GKQ+H++V+R      S  F  + 
Sbjct: 499 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 558

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY+K G +  A   F  M +++ +SW ++++    +G     L  F+ M ++G+ PD
Sbjct: 559 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 618

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ L VL ACSHCG++++GL YF+SM+  Y L P+ EHYA  +D+L RSG  D+A + +
Sbjct: 619 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 678

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP EP  ++W +++++CR+H N+E A+ A ++L +M    D + Y  +SNIYA AG+W
Sbjct: 679 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS-YTLISNIYATAGRW 737

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V++++  M++ G++K    SWV+ +     F   D  HP + +I   +E+L+  +K  
Sbjct: 738 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 797

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY P+T+ ALHD DEE K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+A 
Sbjct: 798 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAF 857

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             ISKI   EI VRD SRFHHFK+G CSC  +W
Sbjct: 858 TYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 250/581 (43%), Gaps = 88/581 (15%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFG--------------------YNSILIICNSLV 115
           FA+LL  C    +AN + Q+H  II  G                    + S   +   +V
Sbjct: 40  FASLLKECK---SANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 96

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
            SY      D A  V + +    +V +N LI    K+G  + AI +   M   G +P  F
Sbjct: 97  ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 156

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T    L A   L     G   H  +    F  NVF+ NAL+ +YS+   + EA  +F E+
Sbjct: 157 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 216

Query: 236 PEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD-- 290
            +    D +S+N +++ +  +     +L LF ++     ++     S ++S+V N L   
Sbjct: 217 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV-NILPAC 275

Query: 291 -----LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
                +   +++H   I      +V V N+L+D YAKCG  E A ++F  +     V W 
Sbjct: 276 GSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 335

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFA------------------------- 380
           AM++ Y Q GN E A  LF  M + NI  D  T+                          
Sbjct: 336 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395

Query: 381 ----------SILRASAELASLSLGKQLHSFVIRSGFMS--NVFSG--------SALLDM 420
                     S+L A A L + S G ++H++ +++  ++  N F G        +AL+DM
Sbjct: 396 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455

Query: 421 YAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY--QPD 476
           Y+K  S K A   F ++P  ERN+V+W  +I   AQ GD+   LK F +M+   Y   P+
Sbjct: 456 YSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPN 515

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCRSGCFDEAEKL 535
           + ++  +L AC+H   I  G Q    + + ++        A+ ++D+  + G  D A  +
Sbjct: 516 AYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHV 575

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
              M  +   I W+S++    +H       +A D   KM K
Sbjct: 576 FDSMS-QKSAISWTSMMTGYGMHGR---GSEALDIFDKMRK 612



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 45/259 (17%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSG--------------------FMSNVFSGSALL 418
           FAS+L+   E  S +   Q+H  +I SG                    F+S    G+ ++
Sbjct: 40  FASLLK---ECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 96

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
             Y   G+   A+   + +     V WN LI    + G   + +     M+++G +PD  
Sbjct: 97  ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 156

Query: 479 SLLSVLSACS-----HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
           +L  VL AC       CG    GL   N       +        ++V +  R G  +EA 
Sbjct: 157 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFI------CNALVAMYSRCGSLEEAS 210

Query: 534 KLMAQMPFE--PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP------YVA 585
            +  ++      D I W+S++++   H     A  A D   KM  +    P       ++
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSA---HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267

Query: 586 MSNIYAVAGQWESVSQVKK 604
           + NI    G  ++V Q K+
Sbjct: 268 IVNILPACGSLKAVPQTKE 286


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/676 (36%), Positives = 375/676 (55%), Gaps = 50/676 (7%)

Query: 87  DTANELIQVHAD--IIKFGYNSILIICN---------SLVDSY--CKIRCLDLARRVFKE 133
           D  N+++ V+ D   +K  ++ ILI  N          L+ +Y  C   C    R +F E
Sbjct: 39  DLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCY--TRHIFDE 96

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           +  K+ V FN +I  +   GL ++A+ +F  M + GF P ++T+   L A     ++ +G
Sbjct: 97  ITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVG 156

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+H  VVK     N+++ N L+ +Y K   +  AR++  EMP  D VS+N M+  YA N
Sbjct: 157 LQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQN 216

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            ++ ++LKL RE++  +         +LL  V N                          
Sbjct: 217 GRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN-------------------------- 250

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
                    C      K++F  L   S + W  MI+ YV      EA++L+++M    + 
Sbjct: 251 -------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVE 303

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  + +S+L A  +L++  LG+++H +V R     N+   +AL+DMYAK G LK+A   
Sbjct: 304 PDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAV 363

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F +M  R++VSW ++ISA   +G  +  +  F+ M  SG+ PD ++ +SVL+ACSH GL+
Sbjct: 364 FDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLV 423

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           +EG   FN M + Y + P  EHY  MVD+L R+G  DEA  L  QMP EP+E +W S+++
Sbjct: 424 DEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLS 482

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CR++ ++  A  AAD LF++     +  YV +SNIYA AG+W+ V  V+  M  +G++K
Sbjct: 483 ACRVYSSMNIALLAADHLFQLAP-EQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKK 541

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
           +   S VE+   V+ F A D+ H Q+ EI + +  L+  MK+ GY P+T  ALHD +EE 
Sbjct: 542 IPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEED 601

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K   L  HSE+LAI FA++NT  GS I + KN+R C DCH A KLISKI  REI +RD+ 
Sbjct: 602 KECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTH 661

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHF+DG CSC D+W
Sbjct: 662 RFHHFRDGVCSCGDYW 677



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 208/442 (47%), Gaps = 35/442 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G     R +F+ + D+  V + ++I  Y     +++A  +F  M  + G  P
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTM-ANQGFYP 135

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T+  +L  CS        +Q+H  ++K G +  L I N LV  Y K + LD ARRV 
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EMP +D VS+N+++ G+A+ G   +A+KL  EM+ L  KP   T  + L A        
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA-------- 247

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                              V N      +  D V+  + +F ++ E   +S+NVMI  Y 
Sbjct: 248 -------------------VTN------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYV 282

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E++ L+ ++Q    +      S++L    +     +GR+IH           + 
Sbjct: 283 NNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLL 342

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+DMYAKCG  +EA+ +F  +     V WT+MISAY   G  ++A+ LF +M  + 
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
            + D   F S+L A +    +  G+   + +   G    +   + ++D+  ++G + +A 
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAY 462

Query: 432 QTFKEMP-ERNIVSWNALISAC 452
              ++MP E N   W +L+SAC
Sbjct: 463 HLTRQMPMEPNERVWGSLLSAC 484



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 35/349 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    N L+S Y K   L  AR + + M  R  VSW  ++ GY+Q  +F +A KL  +
Sbjct: 169 DMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCRE 228

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  D    PD  T  +LL   +     N L                              
Sbjct: 229 ME-DLKLKPDAGTMGSLLPAVTNTSCDNVL------------------------------ 257

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
                + +F ++ +K  +S+N +I  +    +  EA+ L+++MQ  G +P   + ++ L 
Sbjct: 258 ---YVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLP 314

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L+   LGR++H +V +     N+ + NAL+D+Y+K  C+ EAR +F +M   D VS
Sbjct: 315 ACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVS 374

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ Y  + Q K+++ LF++++ + F      F ++L+  ++   +  GR       
Sbjct: 375 WTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA 434

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
                  ++  N +VD+  + G+ +EA  +   +    +   W +++SA
Sbjct: 435 EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 38/273 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSG-------------------------------------NLA 23
           MP ++ VS N +++GY ++G                                     N+ 
Sbjct: 198 MPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVL 257

Query: 24  TARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC 83
             +++F  + +++ +SW ++I  Y       EA  L++ M+  G  +PD V+ +++L  C
Sbjct: 258 YVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHG-VEPDAVSISSVLPAC 316

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
            +   A    ++H  + +      L++ N+L+D Y K  CL  AR VF +M  +D VS+ 
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           ++I+ +   G  ++A+ LF +M+  GF P    F + L+A      +  GR     + + 
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEY 436

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
                +   N ++DL  +   + EA  L  +MP
Sbjct: 437 GITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMP 469


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/624 (38%), Positives = 363/624 (58%), Gaps = 35/624 (5%)

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           LAR +F E+  K+ V FN +I  +    L ++A+ ++  M   GF P  +T+   L A  
Sbjct: 72  LARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASS 131

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               + +G Q+H  V+K     N++V N L+ +Y K   + EA+++  E+P  D VS+N 
Sbjct: 132 RSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNS 191

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M++ YA N ++ ++L+L RE++      +    ++LL  V N                TT
Sbjct: 192 MVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN----------------TT 235

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           + + + V                 KE+F  L+  S + W  MI+ YV     +EA+ L+ 
Sbjct: 236 SDNVLYV-----------------KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYS 278

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M    +  D  +  S+L A  +L++LSLG+++H F  R   + N+   +AL+DMYAK G
Sbjct: 279 QMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCG 338

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            L+DA   F +M  R++VSW ++ISA  + G  +  +  F +M  SG  PDS++ +SVL+
Sbjct: 339 CLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLA 398

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+++G  YFN M +   + PK EH+A +VD+L R+G  DEA   + QMP EPDE
Sbjct: 399 ACSHAGLLDDGRYYFNLMAE-CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDE 457

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W  ++++CR++ N+     AAD+L  +     +  YV +SNIYA AG+W  V+ ++  
Sbjct: 458 RVWGPLLSACRVYSNMNIGILAADKLLMLNP-EHSGYYVLLSNIYAKAGRWADVAAIRSI 516

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M  +G++K+   S VEL   VH F A D  HPQ+ +I  +++ L+ +MK+ GY P+T  A
Sbjct: 517 MERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSA 576

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD +EE K   L  HSE+LA+AFA+INT  G+PI V KNLR C DCH A KLISKI  R
Sbjct: 577 LHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAER 636

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD+ RFHHF++G CSC D+W
Sbjct: 637 EIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 215/442 (48%), Gaps = 35/442 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G    AR +F+ + D+  V + ++I  Y   + +++A  ++  M T G   P
Sbjct: 60  LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFV-P 118

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T+  +L   S  D+    +Q+H  ++K G +  L + N L+  Y K + L  A++V 
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVL 178

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+P +D VS+N++++ +A+ G   +A++L  EM+ L  KP+D T A+ L A        
Sbjct: 179 DEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA-------- 230

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                              V N      +  D V+  +++F ++ +   +S+NVMI  Y 
Sbjct: 231 -------------------VTN------TTSDNVLYVKEMFLKLTKKSVISWNVMIAMYV 265

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   KE++ L+ +++    +       ++L    +   L +GR++H        +  + 
Sbjct: 266 NNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLL 325

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+DMYAKCG   +A+ +F  +     V WT++ISAY + G   +A+ +F EM  + 
Sbjct: 326 LENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSG 385

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           ++ D   F S+L A +    L  G+   + +   G    +   + ++D+  ++G + +A 
Sbjct: 386 LNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAY 445

Query: 432 QTFKEMP-ERNIVSWNALISAC 452
              ++MP E +   W  L+SAC
Sbjct: 446 GFIRQMPLEPDERVWGPLLSAC 467



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 160/350 (45%), Gaps = 41/350 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y K  +L  A+++ + +  R  VSW  ++  Y+Q  +F +A +L  +M 
Sbjct: 154 NLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREME 213

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 P+  T A+LL   +   + N L                                
Sbjct: 214 A-LNLKPNDCTMASLLPAVTNTTSDNVL-------------------------------- 240

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
              + +F ++ +K  +S+N +I  +    + +EA+ L+ +M+  G +P   +  + L A 
Sbjct: 241 -YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAY 299

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L+ ++LGR+VH F  +   + N+ + NAL+D+Y+K  C+ +AR +F +M   D VS+ 
Sbjct: 300 GDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWT 359

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I+ Y    Q ++++ +F E++ +  +     F ++L+  ++   L  GR         
Sbjct: 360 SIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC 419

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
               +++    +VD+  + G+ +EA   +  +  +   P    W  ++SA
Sbjct: 420 GITPKLEHFACVVDLLGRAGKIDEA---YGFIRQMPLEPDERVWGPLLSA 466



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 37/334 (11%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V   L+ +YA CG    A+ IF  ++  + V +  MI +YV     ++AL ++  M    
Sbjct: 56  VGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG 115

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  T+  +L+AS+   SL +G Q+H  V++ G   N++ G+ L+ MY K  SLK+A 
Sbjct: 116 FVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQ 175

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q   E+P R++VSWN+++S  AQNG     L+   +M     +P+  ++ S+L A ++  
Sbjct: 176 QVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT- 234

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMW 548
              + + Y   M  K   +     +  M+ +   +    EA  L +QM     EPD +  
Sbjct: 235 -TSDNVLYVKEMFLKLT-KKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSI 292

Query: 549 SSVINSC----------RIHKNLE-----------------FAK----KAADQLFKMEKL 577
            SV+ +           R+HK  E                 +AK    + A  +F   + 
Sbjct: 293 VSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQF 352

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           RD   + ++ + Y   GQ      V   MR  G+
Sbjct: 353 RDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGL 386



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 1/235 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           PN  T+++ +       S N+   +E+F  +  ++ +SW ++I  Y   +  +EA  L+ 
Sbjct: 219 PNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYS 278

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M  + G +PD V+  ++L    +    +   +VH    +      L++ N+L+D Y K 
Sbjct: 279 QMEAN-GVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKC 337

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            CL  AR VF +M  +D VS+ ++I+ + K G   +A+ +F EM++ G  P    F + L
Sbjct: 338 GCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVL 397

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A      +  GR     + +      +     ++DL  +   + EA     +MP
Sbjct: 398 AACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMP 452


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 393/690 (56%), Gaps = 17/690 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL   +   +    +Q+H  I K G+ S  ++ N+L+D Y K   LDLA  VF  M 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGR 194
            ++ VS+ AL+ GF + G     ++L  EM+      P+++T +A+L A   + D A G 
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCYAWN 253
            +H   V+  + E+  VA++L+ +YSK   + +AR++F       G+ ++N M++ YA  
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 254 EQYKESLKLFRELQF--TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT--TAISE 309
              +++L +FRE++    +    +F F++LL   +     + G Q+H     +  +  S 
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             +A +LVDMY KC R   A ++F  L   + + WTA++  + Q+G + EAL LF    R
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           +    D    +S++   A+ A +  G+Q+H + I+    ++V +G++++DMY K G   +
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDE 366

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+EM   N+VSW  +++   ++G  +  +  FE+M   G +PD V+ L++LSACSH
Sbjct: 367 AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSH 426

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL++E  +YF+ + +   +RPK EHYA MVD+L R+G   EA  L+  MP EP   +W 
Sbjct: 427 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR+HK++   ++A D L  M+   +   YV +SN+ A AG+W    +V+ AMR R
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAMDG-DNPVNYVTLSNVLAEAGEWRECHKVRDAMRRR 545

Query: 610 GVRKVTAYSWVELKSKVHVF---TANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTS-C 664
           G++K    SWVE+  +VH F      +E HPQ  +IRR + ++   M+++ GY  D +  
Sbjct: 546 GLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARF 605

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALI-----NTPEGSPILVMKNLRACTDCHAAIKLI 719
           ALHD DEE + ESL+ HSERLA+   L+         G PI V KNLR C DCH   K +
Sbjct: 606 ALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGL 665

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S +  R + VRD++RFH F+ G CSC+D+W
Sbjct: 666 SAVVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 234/463 (50%), Gaps = 9/463 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  YVK G L  A E+F  M DR  VSWT L+ G+ +        +L  +
Sbjct: 36  GSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGE 95

Query: 63  MRTDGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           MRT   + P +Y   A+L + C   DTA   + +H   ++ GY    ++ +SLV  Y K 
Sbjct: 96  MRTASEAAPNEYTLSASLKACCVVGDTAAG-VGIHGLCVRAGYQEHDVVASSLVLVYSKG 154

Query: 122 RCLDLARRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEM-QHLG-FKPSDFTFA 178
             +  ARRVF        + ++NA+++G+A  G   +A+ +F EM +H G  +P +FTFA
Sbjct: 155 GRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFA 214

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + L A  GL     G QVHA +  + F    N  +A AL+D+Y K   +  A ++F  + 
Sbjct: 215 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE 274

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
             + + +  ++  +A   Q  E+L+LFR    +         S+++ V+A+   ++ GRQ
Sbjct: 275 RKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQ 334

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H   I     ++V   NS+VDMY KCG  +EA+ +F  +   + V WT M++   + G 
Sbjct: 335 VHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGL 394

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
             EA+ LF EM    +  D+ T+ ++L A +    +   ++  S + R   +       A
Sbjct: 395 GREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYA 454

Query: 417 -LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
            ++D+  ++G L++A    + MP E  +  W  L+SAC  + D
Sbjct: 455 CMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 497



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 2/180 (1%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           Q   A +LRASA  +SL  G QLH  + + GF S+   G+ L+DMY K G L  A + F 
Sbjct: 4   QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIE 494
            M +RN+VSW AL+    ++GDA   L+   +M   S   P+  +L + L AC   G   
Sbjct: 64  GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G+   + +  +   +      +S+V +  + G   +A ++            W+++++ 
Sbjct: 124 AGVG-IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/813 (32%), Positives = 428/813 (52%), Gaps = 66/813 (8%)

Query: 1   MPNQNTVSTNMLISG----YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA 56
           +P++  +S   L +G    Y+  G    A  +   +    AV W +LI  + ++ +   A
Sbjct: 87  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +   M    G+ PD+ T   +L  C E  +       H  I   G+ S + ICN+LV 
Sbjct: 147 INVSCRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVA 205

Query: 117 SYCKIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF-KP 172
            Y +   L+ A  +F E+ Q+   D +S+N++++   K      A+ LF +M  +   KP
Sbjct: 206 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 265

Query: 173 SD-----FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           ++      +    L A   L  +   ++VH   ++     +VFV NAL+D Y+K   +  
Sbjct: 266 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 325

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYK------------------------------ 257
           A K+F  M   D VS+N M+  Y+ +  ++                              
Sbjct: 326 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 385

Query: 258 -----ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS---- 308
                E+L LFR++ F+    +     ++LS  A+      G +IH  ++    ++    
Sbjct: 386 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 445

Query: 309 ------EVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEA 360
                 ++ V N+L+DMY+KC  F+ A+ IF +  L   + V WT MI  + Q G+  +A
Sbjct: 446 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 505

Query: 361 LNLFIEMCRA--NISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
           L LF+EM      ++ +  T + IL A A LA++ +GKQ+H++V+R      S  F  + 
Sbjct: 506 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANC 565

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY+K G +  A   F  M +++ +SW ++++    +G     L  F+ M ++G+ PD
Sbjct: 566 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 625

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ L VL ACSHCG++++GL YF+SM+  Y L P+ EHYA  +D+L RSG  D+A + +
Sbjct: 626 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 685

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP EP  ++W +++++CR+H N+E A+ A ++L +M    D + Y  +SNIYA AG+W
Sbjct: 686 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS-YTLISNIYATAGRW 744

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V++++  M++ G++K    SWV+ +     F   D  HP + +I   +E+L+  +K  
Sbjct: 745 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 804

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY P+T+ ALHD DEE K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+A 
Sbjct: 805 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAF 864

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             ISKI   EI VRD SRFHHFK+G CSC  +W
Sbjct: 865 TYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 249/580 (42%), Gaps = 86/580 (14%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFG--------------------YNSILIICNSLV 115
           FA+LL  C    +AN + Q+H  II  G                    + S   +   +V
Sbjct: 47  FASLLKECK---SANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 103

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
            SY      D A  V + +    +V +N LI    K+G  + AI +   M   G +P  F
Sbjct: 104 ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 163

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T    L A   L     G   H  +    F  NVF+ NAL+ +YS+   + EA  +F E+
Sbjct: 164 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 223

Query: 236 PEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV------A 286
            +    D +S+N +++ +  +     +L LF ++     ++     S ++S+V       
Sbjct: 224 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 283

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +   +   +++H   I      +V V N+L+D YAKCG  E A ++F  +     V W A
Sbjct: 284 SLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 343

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFA-------------------------- 380
           M++ Y Q GN E A  LF  M + NI  D  T+                           
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403

Query: 381 ---------SILRASAELASLSLGKQLHSFVIRSGFMS--NVFSG--------SALLDMY 421
                    S+L A A L + S G ++H++ +++  ++  N F G        +AL+DMY
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463

Query: 422 AKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY--QPDS 477
           +K  S K A   F ++P  ERN+V+W  +I   AQ GD+   LK F +M+   Y   P++
Sbjct: 464 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 523

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCRSGCFDEAEKLM 536
            ++  +L AC+H   I  G Q    + + ++        A+ ++D+  + G  D A  + 
Sbjct: 524 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 583

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             M  +   I W+S++    +H       +A D   KM K
Sbjct: 584 DSMS-QKSAISWTSMMTGYGMHGR---GSEALDIFDKMRK 619



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 45/259 (17%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSG--------------------FMSNVFSGSALL 418
           FAS+L+   E  S +   Q+H  +I SG                    F+S    G+ ++
Sbjct: 47  FASLLK---ECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 103

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
             Y   G+   A+   + +     V WN LI    + G   + +     M+++G +PD  
Sbjct: 104 ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 163

Query: 479 SLLSVLSACS-----HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
           +L  VL AC       CG    GL   N       +        ++V +  R G  +EA 
Sbjct: 164 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFI------CNALVAMYSRCGSLEEAS 217

Query: 534 KLMAQMPFE--PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP------YVA 585
            +  ++      D I W+S++++   H     A  A D   KM  +    P       ++
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSA---HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274

Query: 586 MSNIYAVAGQWESVSQVKK 604
           + NI    G  ++V Q K+
Sbjct: 275 IVNILPACGSLKAVPQTKE 293


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/751 (35%), Positives = 430/751 (57%), Gaps = 20/751 (2%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+S + + G L  A+++F ++ +R AV+   LI G  +++   EA  +F+  R     + 
Sbjct: 311  LVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNT 370

Query: 72   DYVTFATLLSGCSEPDTANELI----QVHADIIKFGYNSILI-ICNSLVDSYCKIRCLDL 126
            D  TF  LLS  +E     + +    +VH  I++ G   + I + N LV+ Y K   +D 
Sbjct: 371  D--TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDK 428

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            A RVF+ +  +D VS+N +I+   + G  E A+  +  M+     PS+F   + LS+   
Sbjct: 429  ASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCAS 488

Query: 187  LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN-- 244
            L  +  G+QVH   VK     +  V+NAL+ +Y       E+ ++F  M E D VS+N  
Sbjct: 489  LRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSI 548

Query: 245  --VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              VM++ +A      ES+++F  +  +    ++  F  LLS ++    L++G+Q+H   +
Sbjct: 549  MGVMVSSHA---PTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVL 605

Query: 303  VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL 361
               AI +  V N+L+  YAK G  +  +++F+++S     V W +MIS Y+  G+L+E +
Sbjct: 606  KHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETM 665

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +    M  +N   D  TF+ +L A A +A+L  G ++H+F IRS   S+V   SALLDMY
Sbjct: 666  DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            +K G +  A + F  M ++N  SWN++IS  A++G  +  L+ FE+M ++G  PD V+ +
Sbjct: 726  SKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFV 785

Query: 482  SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            SVLSACSH GL++ GL YF  M + + + P  EHY+ ++D+L R+G   + ++ + +MP 
Sbjct: 786  SVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPM 844

Query: 542  EPDEIMWSSVINSCRIHKN---LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
            +P+ ++W +V+ +CR  K+   ++  K+A+  L ++E  ++   YV  SN YA  G+WE 
Sbjct: 845  KPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEP-QNPVNYVLASNFYAATGRWED 903

Query: 599  VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
             ++ + AM    ++K    SWV L   VH F A D  HP T EI  K+  L+Q++K  GY
Sbjct: 904  TAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGY 963

Query: 659  KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
             P T  AL+D +EE K E L YHSE+LA+AF L  +    PI +MKNLR C DCH A + 
Sbjct: 964  VPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRY 1023

Query: 719  ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            IS+I  R+I +RDS RFHHF+DG CSC D+W
Sbjct: 1024 ISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 293/565 (51%), Gaps = 23/565 (4%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L++ Y K   LA AR++F+ M++R AVSWT L+ GY       EAF++F  M  +G 
Sbjct: 94  SNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGS 153

Query: 69  --SDPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSY--CKIR 122
             S P   TF ++L  C +  PD     +QVH  + K  Y S   +CN+L+  Y  C + 
Sbjct: 154 EFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVG 213

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFTFA 178
               A++VF   P +D +++NAL++ +AK+G       LF+ M H    +  +P++ TF 
Sbjct: 214 LPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFG 273

Query: 179 AALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + ++A   L+  + G   QV A V+K+    +++V +AL+  +++H  + EA+ +F  + 
Sbjct: 274 SLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLK 332

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KLDLQ 292
           E + V+ N +I         +E++ +F   +   F  +   F  LLS VA     +  L 
Sbjct: 333 ERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLM 391

Query: 293 IGRQIHTQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
            GR++H   I+ T + ++K+A  N LV+MYAKCG  ++A  +F  L     V W  +IS 
Sbjct: 392 RGREVHGH-ILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISV 450

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
             Q G  E A+  +  M +  IS       S L + A L  L+ G+Q+H   ++ G   +
Sbjct: 451 LDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLD 510

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA-TLKSFEDMV 469
               +AL+ MY   G+  ++ + F  M E +IVSWN+++     +    A +++ F +M+
Sbjct: 511 TSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMM 570

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           +SG  P+ V+ +++LSA S   ++E G Q  +++  K+          +++    +SG  
Sbjct: 571 RSGLTPNKVTFVNLLSALSPLSVLELGKQ-VHAVVLKHGAIEDNAVDNALMSCYAKSGDM 629

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINS 554
           D  E+L + M    D + W+S+I+ 
Sbjct: 630 DSCEQLFSSMSGRRDAVSWNSMISG 654



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/570 (25%), Positives = 273/570 (47%), Gaps = 58/570 (10%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H +++K G    L + N LV+ Y K   L  AR+VF  M ++++VS+  L++G+   G
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 154 LNEEAIKLFVEMQHLG---FKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVEN 208
           + +EA ++F  M   G    +P+ FTF + L A    G   +A   QVH  V KT +  N
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 209 VFVANALLDLYSKHDCVV----EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
             V NAL+ +Y   +C V    +A+++F   P  D +++N +++ YA       +  LF 
Sbjct: 197 TTVCNALISMYG--NCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254

Query: 265 EL----QFTRFDRSQFPFSTLLSVVA-NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +           ++  F +L++  + +     +  Q+  + + + + S++ V ++LV  
Sbjct: 255 AMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           +A+ G  +EAK+IF NL   + V    +I   V++   EEA+ +F+   R +   +  TF
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVNTDTF 373

Query: 380 ASILRASAELA----SLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTF 434
             +L A AE +     L  G+++H  ++R+G +   +   + L++MYAK G++  A + F
Sbjct: 374 VVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVF 433

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------ 488
           + +  R+ VSWN +IS   QNG  +  + ++  M Q    P + + +S LS+C+      
Sbjct: 434 RLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLT 493

Query: 489 -----HCGLIEEGLQY----FNSMTQKYK-----------LRPKKEH----YASMVDILC 524
                HC  ++ GL       N++ + Y                 EH    + S++ ++ 
Sbjct: 494 AGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMV 553

Query: 525 RSGCFDEAEKL-----MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
            S     AE +     M +    P+++ + +++++      LE  K+    + K   + D
Sbjct: 554 SSHA-PTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIED 612

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            A   A+ + YA +G  +S  Q+  +M  R
Sbjct: 613 NAVDNALMSCYAKSGDMDSCEQLFSSMSGR 642



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 4/352 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIG-GYSQKNQFREAFKLFVDM 63
           +T  +N L+  Y   G  + + E+FNSM +   VSW  ++G   S      E+ ++F +M
Sbjct: 510 DTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNM 569

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G + P+ VTF  LLS  S         QVHA ++K G      + N+L+  Y K   
Sbjct: 570 MRSGLT-PNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGD 628

Query: 124 LDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           +D   ++F  M  ++D+VS+N++I+G+   G  +E +     M H        TF+  L+
Sbjct: 629 MDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLN 688

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +A +  G ++HAF +++    +V V +ALLD+YSK   +  A K+F  M + +  S
Sbjct: 689 ACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFS 748

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI+ YA +   +++L++F E+Q          F ++LS  ++   +  G        
Sbjct: 749 WNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME 808

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
               +  ++  + ++D+  + G+  + +E    +    +T+ W  ++ A  Q
Sbjct: 809 DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQ 860



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L+  Y K G +  A ++FNSM  +   SW  +I GY++     +A ++F +M+
Sbjct: 714 DVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQ 773

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTAN------ELIQVHADIIKFGYNSILIICNSLVDSY 118
            +G   PD+VTF ++LS CS     +      E+++ H  +    + S +I         
Sbjct: 774 RNGAC-PDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKL 832

Query: 119 CKIRCLDLARRVFKEMPQK-DSVSFNALITGF--AKEG----LNEEAIKLFVEMQHLGFK 171
            KI      +     MP K +++ +  ++     +K+G    L +EA ++ +E++     
Sbjct: 833 LKI------QEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQ--N 884

Query: 172 PSDFTFAAALSAGVG 186
           P ++  A+   A  G
Sbjct: 885 PVNYVLASNFYAATG 899



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           ++LH  +++ G   ++F  + L+++YAK   L  A Q F  M ERN VSW  L+S    +
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135

Query: 456 GDAQATLKSFEDMVQSGYQ---PDSVSLLSVLSACSHCG 491
           G      + F+ M+  G +   P   +  SVL AC   G
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAG 174


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/636 (36%), Positives = 381/636 (59%), Gaps = 15/636 (2%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F  MP+++ V++ AL+TG+         +++FVEM  +G  PS +T  A L+A + 
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             D+ LG+QVH + +K        + N+L  LY+K   +  A + F  +PE + +++  M
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211

Query: 247 ITCYAWNEQYKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           I+  A +E+  E  + LF ++       ++F  ++++S+   +LDL +G+Q+   +    
Sbjct: 212 ISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIG 271

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE-- 358
             + + V NS + +Y + G  +EA  +F  +   S + W AMIS Y Q     K +L+  
Sbjct: 272 CETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQAR 331

Query: 359 ----EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
               +AL +F ++ R+ +  D  TF+SIL   + + +L  G+Q+H+  I+SGF+S+V   
Sbjct: 332 SRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVN 391

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           SAL++MY K G ++DA + F EMP R  V+W ++IS  +Q+G  Q  ++ FE+M  +G +
Sbjct: 392 SALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVR 451

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ ++ +S+LSACS+ GL+EE   YF+ M ++Y + P  +HY  M+D+  R G  ++A  
Sbjct: 452 PNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS 511

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +  FEP+E +WSS++  CR H N+E A  AAD+L ++ K +    Y+ + N+Y    
Sbjct: 512 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLEL-KPKGIETYILLLNMYISTE 570

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W+ V++V+K M++  V  +   SW+ +K KV+ F AND  HPQ  E+ + +ENL+++ K
Sbjct: 571 RWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK 630

Query: 655 KEGYKPDTSCALHD--EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
             GY+P  +  L D  +DE+    SLK+HSERLA+A  L+ TP G+ + V KN+  C DC
Sbjct: 631 AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDC 690

Query: 713 HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           H++IKL S +  REI VRDS R H FKDG CSC DF
Sbjct: 691 HSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 239/460 (51%), Gaps = 15/460 (3%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR LF+ M +R  V+WT L+ GY+  +Q     ++FV+M  + G  P + T    L+ C 
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM-LEMGRYPSHYTLGATLNACL 150

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                +   QVH   IK+G  SI  + NSL   Y K+  LD A R F  +P+K+ +++  
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 145 LITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           +I+  A+ E   E  + LF++M   G  P++FT  + +S      D+ LG+QV AF  K 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW----------- 252
               N+ V N+ + LY +     EA +LF +M +   +++N MI+ YA            
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
             +  ++L +FR+L+ +      F FS++LSV +  + L+ G QIH QTI +  +S+V V
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++LV+MY KCG  ++A + F  +   + V WT+MIS Y Q G  +EA+ LF EM  A +
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 450

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAI 431
             ++ TF S+L A +    +   +     + +   +  V      ++DM+ + G ++DA 
Sbjct: 451 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 510

Query: 432 QTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
              K    E N   W++L++ C  +G+ +    + + +++
Sbjct: 511 SFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE 550



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 184/374 (49%), Gaps = 20/374 (5%)

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFST 280
           H    +AR+LF  MPE + V++  ++T Y  N Q    L++F E L+  R+  S +    
Sbjct: 86  HRAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SHYTLGA 144

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
            L+      D+ +G+Q+H   I   A S   + NSL  +YAK G  + A   F  +   +
Sbjct: 145 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 204

Query: 341 TVPWTAMISAYVQKGN-LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
            + WT MISA  +    +E  ++LFI+M    +  ++ T  S++        L+LGKQ+ 
Sbjct: 205 VITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQ 264

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ----- 454
           +F  + G  +N+   ++ + +Y + G   +A++ F++M + +I++WNA+IS  AQ     
Sbjct: 265 AFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSA 324

Query: 455 NGDAQA------TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
             D QA       L  F D+ +S  +PD  +  S+LS CS    +E+G Q  ++ T K  
Sbjct: 325 KDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSG 383

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
                   +++V++  + GC  +A K   +MP     + W+S+I+    H       + A
Sbjct: 384 FLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQ----PQEA 438

Query: 569 DQLFKMEKLRDAAP 582
            QLF+  +L    P
Sbjct: 439 IQLFEEMRLAGVRP 452



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 183/369 (49%), Gaps = 21/369 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L S Y K G+L +A   F  + ++  ++WT +I   ++  +  E    LF+DM  DG 
Sbjct: 178 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGV 237

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      N   QV A   K G  + L + NS +  Y +    D A 
Sbjct: 238 M-PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 296

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R+F++M     +++NA+I+G+      AK+ L       +A+ +F +++    KP  FTF
Sbjct: 297 RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 356

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +K+ F+ +V V +AL+++Y+K  C+ +A K F EMP 
Sbjct: 357 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT 416

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              V++  MI+ Y+ + Q +E+++LF E++      ++  F +LLS  +    ++     
Sbjct: 417 RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHY 476

Query: 298 HTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYV 352
                    I   V     ++DM+ + GR E+A   F+ +      P    W+++++   
Sbjct: 477 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCR 533

Query: 353 QKGNLEEAL 361
             GN+E A 
Sbjct: 534 SHGNMELAF 542



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 163/405 (40%), Gaps = 67/405 (16%)

Query: 305 TAISEVKVANS--LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
           T ++E K   S   V +  +  R  +A+ +F  +   + V WTA+++ Y         L 
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRAAR--DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLE 125

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           +F+EM          T  + L A      + LGKQ+H + I+ G  S    G++L  +YA
Sbjct: 126 VFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYA 185

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLL 481
           K GSL  A++ F  +PE+N+++W  +ISACA++ +  +  +  F DM+  G  P+  +L 
Sbjct: 186 KLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLT 245

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP- 540
           SV+S C     +  G Q   + + K           S + +  R G  DEA +L  QM  
Sbjct: 246 SVMSLCGTRLDLNLGKQ-VQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMED 304

Query: 541 --------------------------------------------FEPDEIMWSSVINSCR 556
                                                        +PD   +SS+++ C 
Sbjct: 305 ASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCS 364

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
               LE  ++   Q  K   L D     A+ N+Y   G    +    KA  E   R  T 
Sbjct: 365 AMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG---CIQDANKAFLEMPTR--TF 419

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            +W  + S           + Q  + +  I+ L +EM+  G +P+
Sbjct: 420 VTWTSMISG----------YSQHGQPQEAIQ-LFEEMRLAGVRPN 453



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G +  A + F  M  RT V+WT +I GYSQ  Q +EA +LF +MR
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 446

Query: 65  TDGGSDPDYVTFATLLSGCS 84
              G  P+ +TF +LLS CS
Sbjct: 447 L-AGVRPNEITFVSLLSACS 465


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/640 (37%), Positives = 377/640 (58%), Gaps = 37/640 (5%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           F   I     + L  EA++L    +    KP   T+   +        +  G++VH  + 
Sbjct: 59  FGEAIDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIR 114

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
            + FV  + + N +L +Y+K   +V+ARK+F EMPE D  S+NVM+  YA     +E+  
Sbjct: 115 TSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARN 174

Query: 262 LFREL----------QFTRFDRSQFP------FSTLLSVVANKLDL-------------- 291
           LF E+            T + +   P      +S +  V  +K ++              
Sbjct: 175 LFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIK 234

Query: 292 --QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
             + G++IH   +     S+  + +SL+DMY KCG  +EA+ IF  +     V WT+MI 
Sbjct: 235 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMID 294

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            Y +     E  +LF E+  +    ++ TF+ +L A A+L +  LG+Q+H ++ R GF  
Sbjct: 295 RYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDP 354

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
             F+ S+L+DMY K G+++ A       P+ ++VS  +LI   AQNG     LK F+ ++
Sbjct: 355 YSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLL 414

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           +SG +PD V+ ++VLSAC+H GL+E+GL++F S+T+K+ L    +HY  +VD+L RSG F
Sbjct: 415 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRF 474

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           ++ + ++++MP +P + +W+SV+  C  + N++ A++AA +LFK+E   +   YV M+NI
Sbjct: 475 EQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTMANI 533

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA AG+WE   +++K M+E G+ K    SW E+K K HVF A D  HP  N+I   +  L
Sbjct: 534 YAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGEL 593

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
            ++MK+EGY P TS  LHD ++E K E+L YHSE+LA+AFA+++T EG+ I V KNLR+C
Sbjct: 594 RKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSC 653

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH+AIK ISKIT R+IT+RDS+RFH F++G CSCRD+W
Sbjct: 654 VDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 184/362 (50%), Gaps = 2/362 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N++++GY + G L  AR LF+ M +R + SWT ++ GY +K+Q  EA  L+
Sbjct: 148 MPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLY 207

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+    S P+  T ++ ++  +         ++H  I++ G +S  ++ +SL+D Y K
Sbjct: 208 SLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 267

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+D AR +F ++  KD VS+ ++I  + K     E   LF E+     +P+++TF+  
Sbjct: 268 CGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGV 327

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   L    LGRQVH ++ +  F    F +++L+D+Y+K   +  AR +    P+ D 
Sbjct: 328 LNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDL 387

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS   +I  YA N +  E+LK F  L  +        F  +LS   +   ++ G +    
Sbjct: 388 VSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 447

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 ++      + LVD+ A+ GRFE+ K + + +    S   W +++      GN++
Sbjct: 448 ITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNID 507

Query: 359 EA 360
            A
Sbjct: 508 LA 509


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/771 (34%), Positives = 422/771 (54%), Gaps = 46/771 (5%)

Query: 13  ISGYVKSGNLATARELFN--SMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           I+ Y + G L  A+ +F+  S++    + W  +I  Y     + E  +LF  M + G   
Sbjct: 163 ITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVA 222

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P  +T+A++++ C           VH  IIK G  +   + NSLV  Y K   L  A ++
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQL 281

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLA 188
           F+ + +KD VS+NA+I    + G  E A+ LF  M  +    +P+  TF + LSA  GL+
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR++HA + + +   +  + N+L+  YSK   V +AR++F  +   D +S+N M+ 
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK--------LDLQIGRQIHTQ 300
            Y  NEQ      +F+ +  +  +    P S  L+++ N         +  + G++IH  
Sbjct: 402 GYEQNEQQGRCFDIFKRMMLSGIE----PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGY 457

Query: 301 TI--VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
            +  +T     + V+N+++ MYAK  R  +A++IF  + +  +  W AM+  Y +    E
Sbjct: 458 ILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFE 517

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG---- 414
           + L +F+++ +     D  + + +L +   L SL LGKQ H+ V      + +F+G    
Sbjct: 518 DVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVV------AKLFNGQDCP 571

Query: 415 ---------SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
                    +AL+ MY+K GS+KDA Q F +M  +++ SW A+I+ CA +G A   L+ F
Sbjct: 572 HQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLF 631

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           E M   G +P+ V+ L++L AC+H GL++EG  YF+SM   Y L P  EHYA M+D+  R
Sbjct: 632 ERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGR 691

Query: 526 SGCFDEAEKLM--AQMPFEP--DEI--MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           SG FD A+ L+      F+P  D+I  +W  ++ +C   K L+   +AA ++ ++E   D
Sbjct: 692 SGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEP-ED 750

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
            A Y+ ++N+YA +G WE   +V+KAMR++G+RK    SW++  ++ HVF A D  HPQ 
Sbjct: 751 EATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQR 810

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            EI  K+  L    ++ GY P T   LHD DE  K   L  HSE+LA++F L+N   G+ 
Sbjct: 811 KEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNG 870

Query: 700 IL-VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ++ VMKNLR C DCH+ +K  S +  REI +RDS RFH F+DG CSC D+W
Sbjct: 871 VIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 268/558 (48%), Gaps = 28/558 (5%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L  A++LF++  +R  +SW+ LI  YS+   F +AF LF  M  + G  P+  + A+LL 
Sbjct: 71  LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGE-GLQPNGFSLASLLK 129

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE--MPQKDS 139
                       Q+H   I+ G+     I  + +  Y +   L+ A+RVF E  +   D 
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHA 198
           + +N++I  +   G   E ++LF +M  +G   P++ T+A+ ++A     +   G  VH 
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
            ++K   +E   + N+L+  Y K   +  A +LF  +   D VS+N MI   A NEQ  E
Sbjct: 250 RIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMI---AANEQRGE 305

Query: 259 ---SLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              +L LFR +         ++  F +LLS V+    L+ GR+IH      +   +  + 
Sbjct: 306 GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSIT 365

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           NSL+  Y+KC    +A+EIF  L     + W +M++ Y Q        ++F  M  + I 
Sbjct: 366 NSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE 425

Query: 374 ADQATFASIL----RASAELASLSLGKQLHSFVIR---SGFMSNVFSGSALLDMYAKSGS 426
            D  +   I     R S+ L     GK++H +++R    G +S   S +A+L MYAK   
Sbjct: 426 PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVS-NAILKMYAKFNR 484

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + DA + FK M  R+  SWNA++   ++N   +  L  F D+++ G+  D VSL  +L++
Sbjct: 485 IADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTS 544

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLR--PKKEHYAS----MVDILCRSGCFDEAEKLMAQMP 540
           C     ++ G Q+   + + +  +  P ++   S    ++ +  + G   +A ++  +M 
Sbjct: 545 CGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME 604

Query: 541 FEPDEIMWSSVINSCRIH 558
              D   W+++I  C  H
Sbjct: 605 -RKDVFSWTAMITGCAHH 621



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 242/524 (46%), Gaps = 33/524 (6%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGG 68
           N L++ Y K GNL  A +LF  +  +  VSW  +I    Q+ +   A  LF  M + +  
Sbjct: 263 NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPP 322

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ VTF +LLS  S         ++HA I +        I NSL+  Y K R +  AR
Sbjct: 323 VQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAR 382

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT----FAAALSAG 184
            +F+ +  +D +S+N+++ G+ +         +F  M   G +P   +    F AA    
Sbjct: 383 EIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDS 442

Query: 185 VGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            GL     G+++H ++++  T    ++ V+NA+L +Y+K + + +A K+F  M   D  S
Sbjct: 443 SGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYS 502

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+  Y+ N ++++ L +F ++    F       S LL+     + LQ+G+Q H   +
Sbjct: 503 WNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFH--AV 560

Query: 303 VTTAI---------SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           V             S + + N+L+ MY+KCG  ++A ++F  +       WTAMI+    
Sbjct: 561 VAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAH 620

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVF 412
            G   EAL LF  M    I  +Q TF ++L A A    +  G     S     G   ++ 
Sbjct: 621 HGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIE 680

Query: 413 SGSALLDMYAKSGSLKDA-------IQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
             + ++D++ +SG    A       I  FK   +  +  W  L+ AC  +      +++ 
Sbjct: 681 HYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAA 740

Query: 466 EDMVQSGYQPD---SVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
             +++   +P+   +  LL+ L A S  GL E+ ++   +M  K
Sbjct: 741 TKILE--LEPEDEATYILLANLYASS--GLWEDAIKVRKAMRDK 780



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 246/506 (48%), Gaps = 41/506 (8%)

Query: 103 GYNSILII----CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
           G++S  I     C+  + S  +   L  A+++F   P +D +S++ALI  +++ G   +A
Sbjct: 46  GFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQA 105

Query: 159 IKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL 218
             LF +M   G +P+ F+ A+ L       +I L RQ+H + ++T F  +  +  A + +
Sbjct: 106 FGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITM 165

Query: 219 YSKHDCVVEARKLFGE--MPEVDGVSYNVMITCYAWNEQYKESLKLF-RELQFTRFDRSQ 275
           YS+   + +A+++F E  +  +D + +N +I  Y ++  + E L+LF + +       ++
Sbjct: 166 YSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTE 225

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             ++++++   +  + + G  +H + I+   +    + NSLV  Y KCG  + A ++F  
Sbjct: 226 LTYASVVNACGSSGEEKYGAMVHGR-IIKAGLEATNLWNSLVTFYGKCGNLQHASQLFER 284

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN--ISADQATFASILRASAELASLS 393
           +S    V W AMI+A  Q+G  E AL LF  M +    +  ++ TF S+L A + L++L 
Sbjct: 285 ISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALR 344

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+++H+ + R     +    ++L+  Y+K   +  A + F+ +  R+I+SWN++++   
Sbjct: 345 CGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYE 404

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           QN         F+ M+ SG +PDS SL  + +A S       GL YF         R  K
Sbjct: 405 QNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR---DSSGLIYF---------RRGK 452

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           E +  ++  +   G        + +M  + + I                     A+++FK
Sbjct: 453 EIHGYILRRITPGGVSLSVSNAILKMYAKFNRI-------------------ADAEKIFK 493

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESV 599
             K RD+  + AM + Y+   ++E V
Sbjct: 494 GMKNRDSYSWNAMMDGYSRNAKFEDV 519



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 159/300 (53%), Gaps = 10/300 (3%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q H F   + F+      +  L   S+H+ +  A++LF   P  D +S++ +I  Y+   
Sbjct: 43  QNHGF--SSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCG 100

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
            + ++  LF+++       + F  ++LL V  +  ++ + RQ+H  +I T    +  +  
Sbjct: 101 NFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRA 160

Query: 315 SLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           + + MY++CG  E+A+ +F   +L  +  + W ++I+AY+  G   E L LF +M    +
Sbjct: 161 AWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGV 220

Query: 373 SA-DQATFASILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDA 430
            A  + T+AS++ A         G  +H  +I++G   +N++  ++L+  Y K G+L+ A
Sbjct: 221 VAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLW--NSLVTFYGKCGNLQHA 278

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM--VQSGYQPDSVSLLSVLSACS 488
            Q F+ +  +++VSWNA+I+A  Q G+ +  L  F  M  V+   QP+ V+ LS+LSA S
Sbjct: 279 SQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVS 338



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 161/342 (47%), Gaps = 15/342 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T  TN LI+ Y K   +  ARE+F  ++ R  +SW  ++ GY Q  Q    F +F  M 
Sbjct: 361 DTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMM 420

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------LIICNSLVDSY 118
              G +PD  +   + +  S   +     +   +I  +    I      L + N+++  Y
Sbjct: 421 LS-GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMY 479

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  A ++FK M  +DS S+NA++ G+++    E+ + +F+++   GF     + +
Sbjct: 480 AKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLS 539

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVEN-------VFVANALLDLYSKHDCVVEARKL 231
             L++   L  + LG+Q HA V K    ++       + + NAL+ +YSK   + +A ++
Sbjct: 540 ILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQV 599

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +M   D  S+  MIT  A +    E+L+LF  ++      +Q  F  LL   A+   +
Sbjct: 600 FLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLV 659

Query: 292 QIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEI 332
           Q G            +S  ++    ++D++ + G+F+ AK +
Sbjct: 660 QEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSL 701


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/758 (34%), Positives = 422/758 (55%), Gaps = 22/758 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+     ++F+ + +R  VSW  LI       ++  A + F  M  D   
Sbjct: 133 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDEDV 191

Query: 70  DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFG-YNSILIICNSLVDSYCKIRCLD 125
           +P   T  ++   CS       L+   QVHA  ++ G  NS +I  N+LV  Y K+  L 
Sbjct: 192 EPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII--NTLVAMYGKMGKLA 249

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            ++ +      +D V++N +++   +     EA++   EM   G +P  FT ++ L A  
Sbjct: 250 SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 186 GLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            L  +  G+++HA+ +K   + EN FV +AL+D+Y     V+   ++F  M +     +N
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWN 369

Query: 245 VMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MIT YA NE  +E+L LF E++ +     +    + ++              IH   + 
Sbjct: 370 AMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVK 429

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  V N+L+DMY++ G+ + AK IF  +     V W  +I+ YV     E+AL +
Sbjct: 430 RGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLM 489

Query: 364 FIEM-----------CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             +M            R ++  +  T  +IL + A L++L+ GK++H++ I++   ++V 
Sbjct: 490 LHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 549

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            GSAL+DMYAK G L+ + + F ++P RN+++WN ++ A   +G++Q  +     M+  G
Sbjct: 550 VGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQG 609

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+ +SV +ACSH G++ EGL+ F +M + Y + P  +HYA +VD+L R+G   EA
Sbjct: 610 VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEA 669

Query: 533 EKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
            +L+  +P   D+   WSS++ +CRIH NLE  + AA  L ++E    A+ YV ++NIY+
Sbjct: 670 YQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYS 728

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG W   ++V++ M+ +GVRK    SW+E   +VH F A D  HPQ+ ++R  +E L +
Sbjct: 729 SAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWE 788

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            M+KEGY PDTSC LH+ +E+ K   L  HSE+LAIAF ++NT  G+ I V KNLR C D
Sbjct: 789 RMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 848

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A K ISK+  REI +RD  RFHHFK+G CSC D+W
Sbjct: 849 CHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 271/552 (49%), Gaps = 24/552 (4%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  L+    + N  REA   ++DM   G   PD   F  LL   ++    +   Q+HA +
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLG-IKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119

Query: 100 IKFGYN-SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
            KFGY    + + N+LV+ Y K        +VF  + +++ VS+N+LI+        E A
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179

Query: 159 IKLFVEMQHLGFKPSDFTF---AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           ++ F  M     +PS FT    A A S       + +G+QVHA+ ++   + N F+ N L
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL-NSFIINTL 238

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           + +Y K   +  ++ L G     D V++N +++    NEQ+ E+L+  RE+     +   
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFA 334
           F  S++L   ++   L+ G+++H   +   ++ E   V ++LVDMY  C +      +F 
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD 358

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLS 393
            +       W AMI+ Y Q    EEAL LFIEM   A + A+  T A ++ A     + S
Sbjct: 359 GMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFS 418

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA-- 451
             + +H FV++ G   + F  +AL+DMY++ G +  A + F +M +R++V+WN +I+   
Sbjct: 419 KKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478

Query: 452 -CAQNGDAQATL--------KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
              ++ DA   L        K+ E   +   +P+S++L+++L +C+    + +G +  ++
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE-IHA 537

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
              K  L       +++VD+  + GC   + K+  Q+P   + I W+ ++ +  +H N  
Sbjct: 538 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN-- 594

Query: 563 FAKKAADQLFKM 574
            ++ A D L  M
Sbjct: 595 -SQDAIDMLRMM 605



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 247/483 (51%), Gaps = 19/483 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+   N L++ Y K G LA+++ L  S   R  V+W  ++    Q  QF EA +   +M 
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
            + G +PD  T +++L  CS  +      ++HA  +K G  +    + ++LVD YC  + 
Sbjct: 291 LE-GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 349

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALS 182
           +    RVF  M  +    +NA+ITG+A+   +EEA+ LF+EM+   G   +  T A  + 
Sbjct: 350 VLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V     +    +H FVVK     + FV NAL+D+YS+   +  A+++FG+M + D V+
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVT 469

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ-----------FPFSTLLSVVANKLDL 291
           +N +IT Y ++E+++++L +  ++Q      S+               T+L   A    L
Sbjct: 470 WNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSAL 529

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G++IH   I     ++V V ++LVDMYAKCG  + ++++F  +   + + W  ++ AY
Sbjct: 530 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAY 589

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSN 410
              GN ++A+++   M    +  ++ TF S+  A +    ++ G K  ++     G   +
Sbjct: 590 GMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPS 649

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNI---VSWNALISACAQNGDAQATLKSFED 467
               + ++D+  ++G +K+A Q    +P RN     +W++L+ AC  + + +    + ++
Sbjct: 650 SDHYACVVDLLGRAGRVKEAYQLINLIP-RNFDKAGAWSSLLGACRIHNNLEIGEIAAQN 708

Query: 468 MVQ 470
           ++Q
Sbjct: 709 LIQ 711



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 217/440 (49%), Gaps = 15/440 (3%)

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           L+    +  L  EA+  +++M  LG KP +F F A L A   L D+ LG+Q+HA V K  
Sbjct: 64  LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123

Query: 205 F-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
           + V++V VAN L++LY K        K+F  + E + VS+N +I+     E+++ +L+ F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183

Query: 264 RELQFTRFDRSQFPFSTLLSVVAN---KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
           R +     + S F   ++    +N      L +G+Q+H   +    ++   + N+LV MY
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-IINTLVAMY 242

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
            K G+   +K +  +      V W  ++S+  Q     EAL    EM    +  D  T +
Sbjct: 243 GKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTIS 302

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           S+L A + L  L  GK+LH++ +++G +  N F GSAL+DMY     +    + F  M +
Sbjct: 303 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFD 362

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQS-GYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           R I  WNA+I+  AQN   +  L  F +M +S G   +S ++  V+ AC   G   +  +
Sbjct: 363 RKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK-E 421

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
             +    K  L   +    +++D+  R G  D A+++  +M  + D + W+++I      
Sbjct: 422 AIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIITG---- 476

Query: 559 KNLEFAKKAADQLFKMEKLR 578
               F+++  D L  + K++
Sbjct: 477 --YVFSERHEDALLMLHKMQ 494



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 184/376 (48%), Gaps = 26/376 (6%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N+   + L+  Y     + +   +F+ M DR    W  +I GY+Q     EA  LF++
Sbjct: 331 DENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIE 390

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G   +  T A ++  C      ++   +H  ++K G +    + N+L+D Y ++ 
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----------GFK 171
            +D+A+R+F +M  +D V++N +ITG+     +E+A+ +  +MQ L             K
Sbjct: 451 KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLK 510

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+  T    L +   L+ +A G+++HA+ +K N   +V V +AL+D+Y+K  C+  +RK+
Sbjct: 511 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 570

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++P  + +++NV++  Y  +   ++++ + R +       ++  F ++ +  ++   +
Sbjct: 571 FDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMV 630

Query: 292 QIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP------- 343
             G +I         +       + +VD+  + GR +EA ++      I+ +P       
Sbjct: 631 NEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQL------INLIPRNFDKAG 684

Query: 344 -WTAMISAYVQKGNLE 358
            W++++ A     NLE
Sbjct: 685 AWSSLLGACRIHNNLE 700



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A   F + SH S   W  ++ + V+   L EA+  +I+M    I  D   F ++L+A A+
Sbjct: 47  APSKFISQSH-SPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVAD 105

Query: 389 LASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
           L  + LGKQ+H+ V + G+ + +V   + L+++Y K G      + F  + ERN VSWN+
Sbjct: 106 LQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 165

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           LIS+       +  L++F  M+    +P S +L+SV  ACS+  +  EGL         Y
Sbjct: 166 LISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPM-PEGL-LMGKQVHAY 223

Query: 508 KLRPKKEHYASMVDILC----RSGCFDEAEKLMAQMPFEP-DEIMWSSVINS-CRIHKNL 561
            LR K E  + +++ L     + G    ++ L+    FE  D + W++V++S C+  + L
Sbjct: 224 GLR-KGELNSFIINTLVAMYGKMGKLASSKVLLGS--FEGRDLVTWNTVLSSLCQNEQFL 280

Query: 562 E 562
           E
Sbjct: 281 E 281


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/749 (34%), Positives = 408/749 (54%), Gaps = 17/749 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT-DGGSDPDYV 74
           ++ SG+L+ A  LF+ +      ++  LI  YS  +    A  L +  R       P+  
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF   L  CS     +    +H   I  G  + L +  +L+D Y K  CL  A  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIK--LFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           P +D V++NA++ G+A  G+   A+   L ++MQ    +P+  T  A L        +A 
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 193 GRQVHAFVV----------KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           G  VHA+ +          K+   + V +  ALLD+Y+K   ++ AR++F  MP  + V+
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 243 YNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           ++ +I  +    +  ++  LF+ +  Q   F  S    ++ L   A+   L++G Q+H  
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              +   +++   NSL+ MYAK G  ++A  +F  ++   TV ++A++S YVQ G  EEA
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
             +F +M   N+  D AT  S++ A + LA+L  G+  H  VI  G  S     +AL+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G +  + Q F  MP R+IVSWN +I+    +G  +     F +M   G+ PD V+ 
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + +LSACSH GL+ EG  +F+ M   Y L P+ EHY  MVD+L R G  DEA + +  MP
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
              D  +W +++ +CR++KN++  KK +  + ++        +V +SNIY+ AG+++  +
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP-EGTGNFVLLSNIYSAAGRFDEAA 664

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V+   + +G +K    SW+E+   +H F   D+ HPQ+ EI R+++N++  +KK GY+P
Sbjct: 665 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 724

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTS  L D +EE K ++L  HSE+LAIA+ +++  E   I V KNLR C DCH  IK IS
Sbjct: 725 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHIS 784

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +  R I VRD++RFHHFK+G CSC DFW
Sbjct: 785 LVKRRAIIVRDANRFHHFKNGQCSCGDFW 813


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/753 (34%), Positives = 410/753 (54%), Gaps = 8/753 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++   +N L+S Y  +G+++ A  +F  M +R  VSW  +I  +S      E F L   M
Sbjct: 217 EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQM 276

Query: 64  RTDGGS---DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     PD  T AT+L  C+          VH   +K   +  +++ N+L+D Y K
Sbjct: 277 MEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSK 336

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFA 178
             C++ A+ +FK    K+ VS+N ++ GF+  G   +   L  +M   G   +  + T  
Sbjct: 337 CGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTIL 396

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMPE 237
            A+      + +   +++H + +K  FV N   VANA +  Y+K   +  A ++F  +  
Sbjct: 397 NAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS 456

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
               S+N +I  Y+ +   + SL  + +++ +      F   +LLS  +    L++G+++
Sbjct: 457 KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEV 516

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   I      +  V  SL+ +Y  CG    A  +F  +   + V W  M++ Y+Q G  
Sbjct: 517 HGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFP 576

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E AL+LF +M    +   + +  S+  A + L SL LG++ H + ++     N F   ++
Sbjct: 577 ERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSV 636

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMYAK+GS+ ++ + F  + ER++ SWNA++     +G A+  +K FE+M ++G+ PD 
Sbjct: 637 IDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDE 696

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++ L VL+AC+H GL+ EGL Y + M   + + P  +HYA ++D+L R+G  DEA K+  
Sbjct: 697 LTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIAT 756

Query: 538 -QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            +M  EP   +W+ +++SCRIHKNLE  +K A +LF  E       YV +SN+YA +G+W
Sbjct: 757 EEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEP-EKPENYVLLSNLYAGSGKW 815

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +V++ M+E  +RK    SW+EL  KV  F A +       EI+     L +E+ K 
Sbjct: 816 DEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKM 875

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY+PDTS   HD  EE K E L+ HSE+LAI + LI T EG+ + V KNLR C DCH A 
Sbjct: 876 GYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAA 935

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KLISK+  REI VRD+ RFHHFK+GFCSC D+W
Sbjct: 936 KLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 282/597 (47%), Gaps = 18/597 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N + + T  +I+ Y   G+   +R +F+++  +    W  +I  YS+   +    ++F
Sbjct: 113 LSNDDVLCTR-VITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMF 171

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M T+ G  PD  TF  ++  C+        + VH  ++K      + + N+LV  Y  
Sbjct: 172 VKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGT 231

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM----QHLGFKPSDFT 176
              +  A RVFK MP+++ VS+N++I  F+  GL+EE   L  +M      + F P   T
Sbjct: 232 NGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVAT 291

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            A  L       +I +G+ VH   +K +  + V V NAL+D+YSK  C+ +A+ +F    
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL--LSVVANKLDLQIG 294
             + VS+N M+  ++      ++  L R++     D      + L  + V   +  L   
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411

Query: 295 RQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           +++H  ++    +   + VAN+ V  YAKCG    A  +F ++   +   W A+I  Y Q
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
             +   +L+ + +M  + +  D  T  S+L A +++ SL LGK++H  +IR+    + F 
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV 531

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
             +LL +Y   G L  A   F  M ++ +VSWN +++   QNG  +  L  F  MV  G 
Sbjct: 532 YISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGV 591

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCF 529
           QP  +S++SV  ACS    +  G +        Y L+   E  A    S++D+  ++G  
Sbjct: 592 QPCEISMMSVFGACSLLPSLRLGRE-----AHGYALKCLLEDNAFIACSVIDMYAKNGSV 646

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
            E+ K+   +  E     W++++    IH   + A K  +++ +     D   ++ +
Sbjct: 647 MESFKVFNGLK-ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGV 702



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 203/473 (42%), Gaps = 47/473 (9%)

Query: 189 DIALGRQVHAFVVKTNFVENVFV-ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           DI LGR++H  V ++  + N  V    ++ +YS      ++R +F  + + +   +N +I
Sbjct: 96  DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155

Query: 248 TCYAWNEQYKESLKLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           + Y+ NE Y   L++F + +  +      F F  ++   A   ++Q+G  +H   + T  
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           + +V V+N+LV  Y   G   +A  +F  +   + V W +MI  +   G  EE   L  +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275

Query: 367 MCRAN----ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           M   +     + D AT A++L   A    + +GK +H   ++      V   +AL+DMY+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG--YQPDSVSL 480
           K G + DA   FK    +N+VSWN ++   +  GD   T      M+  G   + D V++
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI 395

Query: 481 LSVLSAC-----------SHCGLIEEGLQYFNSMTQKYKLRPKKE----HYASMVDILCR 525
           L+ +  C            HC  +++   + N +     +    +     YA  V    R
Sbjct: 396 LNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIR 455

Query: 526 SGCFDEAEKLMA----------------QMP---FEPDEIMWSSVINSCRIHKNLEFAKK 566
           S   +    L+                 QM      PD     S++++C   K+L+  K+
Sbjct: 456 SKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKE 515

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
               + +    RD+  Y+++ ++Y   G+  +   +  AM ++     T  SW
Sbjct: 516 VHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDK-----TLVSW 563



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 49/303 (16%)

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSN--VFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +AS     + LG+++H  V  S  +SN  V   + ++ MY+  GS  D+   F  + ++N
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKN 147

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           +  WNA+IS+ ++N      L+ F  M+ +SG  PD+ +   V+ AC+    ++ GL   
Sbjct: 148 LFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVH 207

Query: 501 NSMTQK----------------------------YKLRPKKE--HYASMVDILCRSGCFD 530
             + +                             +K+ P++    + SM+ +   +G  +
Sbjct: 208 GLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267

Query: 531 EAEKLMAQM-------PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
           E   L+ QM        F PD    ++V+  C   + +   K       K+   ++    
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN 327

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            A+ ++Y+  G       + K    + V      SW    + V  F+A  ++H   + +R
Sbjct: 328 NALMDMYSKCGCINDAQVIFKLNNNKNV-----VSW---NTMVGGFSAAGDIHKTFDLLR 379

Query: 644 RKI 646
           + +
Sbjct: 380 QML 382


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/695 (34%), Positives = 396/695 (56%), Gaps = 22/695 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            A LL   ++  +    +Q+H  + K G+ S  ++ N+L+D Y K   LD+A  VF  M 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGR 194
            ++ VS+ AL+ GF + G     ++L  EM+      P+++T +A+L A     D+  G 
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCYAWN 253
            +H   V+T + E+  VA++L+ LYSK   + +AR++F       G+ ++N MI+ YA  
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 254 EQYKESLKLFRELQFT------RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT--T 305
              +++L +FRE++        +    +F F++LL         + G Q+H     +  +
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S   +A +LVDMY KCGR   A ++F  L   + + WT ++  + Q+G + EAL LF 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
              R+   AD    +SI+   A+ A +  G+Q+H + ++S   ++V +G++++DMY K G
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCG 579

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
              +A + F+E+P RN+VSW  +I+   ++G  +  +  FE+M   G +PD V+ L++LS
Sbjct: 580 LPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLS 639

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++E  +YF+ + +   +RPK EHYA MVD+L R+G   EA  L+  MP EP  
Sbjct: 640 ACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTV 699

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W +++++CR+HK++   ++A D L  ++   +   YV +SN++A AG W    +V+ A
Sbjct: 700 GVWQTLLSACRVHKDVAVGREAGDVLLAIDG-DNPVNYVTLSNVFAEAGAWRECHKVRDA 758

Query: 606 MRERGVRKVTAYSWVELKSKVHVF--TANDELHPQTNEIRRKIENLMQEMKKE-GY-KPD 661
           MR RG++K    SWVE+  +VH F    ++E HPQ  +IRR + ++   ++++ GY   D
Sbjct: 759 MRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADD 818

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTP-------EGSPILVMKNLRACTDCHA 714
              ALHD DEE + ESL+ HSERLA+   L+             PI V KNLR C DCH 
Sbjct: 819 VQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHE 878

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             K +S +  R + VRD++RFH F+ G CSC+D+W
Sbjct: 879 FFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 229/469 (48%), Gaps = 17/469 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             +T+  N LI  Y K G L  A E+F  M DR  VSWT L+ G+ Q        +L  +
Sbjct: 249 GSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGE 308

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR    + P+  T +  L  C   +     + +H   ++ GY    ++ +SLV  Y K  
Sbjct: 309 MRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGG 368

Query: 123 CLDLARRVFK-EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM---------QHLGFKP 172
            +  ARRVF      +   ++NA+I+G+A  G   +A+ +F EM         QH   +P
Sbjct: 369 RIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQH---QP 425

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARK 230
            +FTFA+ L A  GL     G QVHA +  + F    N  +A AL+D+Y K   +  A +
Sbjct: 426 DEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQ 485

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F  +   + + +  ++  +A   Q  E+L+LFR    +         S+++ V+A+   
Sbjct: 486 VFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFAL 545

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           ++ GRQ+H   + + A ++V   NS+VDMY KCG  +EA+ +F  +   + V WT MI+ 
Sbjct: 546 VEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMING 605

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
             + G   EA+ +F EM    +  D+ T+ ++L A +    +   ++  S + R   +  
Sbjct: 606 LGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRP 665

Query: 411 VFSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
                A ++D+  ++G L++A    + MP E  +  W  L+SAC  + D
Sbjct: 666 KAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 714


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/637 (36%), Positives = 374/637 (58%), Gaps = 18/637 (2%)

Query: 128 RRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           R +F +   K SV S+N++I  FA+ G + +A+  F  M+ L   P+  TF   + +   
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  G+Q+H       +  ++FVA+AL+D+YSK   + +ARKLF E+PE + VS+  M
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFP-------------FSTLLSVVANKLDLQI 293
           I+ Y  NE+ +E++ LF+E  F   D + +                 ++S  A      +
Sbjct: 159 ISGYVQNERAREAVFLFKE--FLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +       + V N+L+D YAKCG    ++++F  +       W ++I+ Y Q
Sbjct: 217 TECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276

Query: 354 KGNLEEALNLFIEMC-RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
            G   EA +LF +M  R  +  +  T +++L A A   +L +GK +H  V++     N+ 
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            G++++DMY K G ++ A + F  +  +N+ SW  +++    +G  +  +K F +M++ G
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ ++ +SVL+ACSH GL++EG  +FN M  ++ + P  EHY+ MVD+L R+G   EA
Sbjct: 397 IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
             L+ +M  +PD I+W S++ +CRIHKN+E  + +A +LFK++   +   YV +SNIYA 
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDP-SNCGYYVLLSNIYAD 515

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
           AG+W+ V +++  M+  G+ K   YS VE K +VHVF   D+ HPQ  +I   ++ L  +
Sbjct: 516 AGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVK 575

Query: 653 MKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
           +++ GY P+ +  L+D D E K   L+ HSE+LA+AF ++N+  GS I ++KNLR C DC
Sbjct: 576 LQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDC 635

Query: 713 HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           H AIKLISKI  REI +RDS RFHHFKDG CSC D+W
Sbjct: 636 HFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 213/451 (47%), Gaps = 28/451 (6%)

Query: 23  ATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           A  R +F   VD+T+V SW  +I  +++     +A   F  MR      P+  TF   + 
Sbjct: 36  ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLS-LHPNRSTFPCTIK 94

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
            CS         Q+H     FGY S + + ++L+D Y K   L+ AR++F E+P+++ VS
Sbjct: 95  SCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVS 154

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF-------------TFAAALSAGVGLA 188
           + ++I+G+ +     EA+ LF E   L    +D+                  +SA   + 
Sbjct: 155 WTSMISGYVQNERAREAVFLFKEF--LLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
             ++   VH   VK  F   + V N L+D Y+K   +  +RK+F  M E D  S+N +I 
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIA 272

Query: 249 CYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            YA N    E+  LF ++ +      +    S +L   A+   LQIG+ IH Q +     
Sbjct: 273 VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE 332

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + V  S+VDMY KCGR E A++ F  L   +   WT M++ Y   G+ +EA+ +F EM
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392

Query: 368 CRANISADQATFASILRASAELASLSLG-----KQLHSFVIRSGFMSNVFSGSALLDMYA 422
            R  I  +  TF S+L A +    L  G     K    F +  G    +   S ++D+  
Sbjct: 393 IRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPG----IEHYSCMVDLLG 448

Query: 423 KSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           ++G LK+A    +EM  + + + W +L+ AC
Sbjct: 449 RAGYLKEAYGLIQEMKVKPDFIVWGSLLGAC 479



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 172/360 (47%), Gaps = 13/360 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD- 70
           LI  Y K G L  AR+LF+ + +R  VSWT +I GY Q  + REA  LF +      +D 
Sbjct: 127 LIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186

Query: 71  ---------PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
                     D V    ++S C+     +    VH   +K G+   L + N+L+D+Y K 
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
             + ++R+VF  M + D  S+N+LI  +A+ GL+ EA  LF +M   G  + +  T +A 
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAV 306

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A      + +G+ +H  VVK    +N+ V  +++D+Y K   V  ARK F  +   + 
Sbjct: 307 LLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNV 366

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+ VM+  Y  +   KE++K+F E+       +   F ++L+  ++   L+ G     +
Sbjct: 367 KSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK 426

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 +   ++  + +VD+  + G  +EA  +   +      + W +++ A     N+E
Sbjct: 427 MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 91/174 (52%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K G ++ +R++F+ M +    SW  LI  Y+Q     EAF LF DM   G  
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             + VT + +L  C+          +H  ++K      L++  S+VD YCK   +++AR+
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            F  + +K+  S+  ++ G+   G  +EA+K+F EM   G KP+  TF + L+A
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAA 410



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 12/101 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V    ++  Y K G +  AR+ F+ +  +   SWT+++ GY      +EA K+F +M 
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM- 392

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
              G  P+Y+TF ++L+ CS           HA ++K G++
Sbjct: 393 IRCGIKPNYITFVSVLAACS-----------HAGLLKEGWH 422


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/770 (33%), Positives = 396/770 (51%), Gaps = 116/770 (15%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ------------------ 136
           VHA I+  G+     I N L++ YCK   +  AR++F ++P+                  
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86

Query: 137 ---------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                          +D+VS+NA+IT ++       A+ LFV+M+  GF P  FTF++ L
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 182 SAGVGLADIALGRQ-VHAFVVKTNFVENVFVANALLDLY---------SKHDCVVEARKL 231
           SA   +AD     Q +H  V+K   +    V NALL  Y              +  ARK+
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 232 FGEMPE---------------------------VDGVSY------NVMITCYAWNEQYKE 258
           F E P+                           +DG++Y      N MI+ Y     Y+E
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVAN---KLDL-QIGRQIHTQTIVTTA-------- 306
           +   FR +        ++ +++L+S   +   K+ +   GRQ+H   + T          
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326

Query: 307 ---------------------------ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
                                      + ++   N+++  Y    R EEA  IF+ +   
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
           + + WT MIS   Q G  EE L LF +M    +      FA  + A + L SL  G+Q+H
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           S VIR G  S + +G+AL+ MY++ G ++ A   F  MP  + VSWNA+I+A AQ+G   
Sbjct: 447 SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             ++ FE M++    PD ++ L++L+AC+H GLI+EG  YF++M  +Y + P ++HYA +
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           +D+LCR+G F +A+ ++  MPFE    +W +++  CRIH N+E   +AAD+L ++   +D
Sbjct: 567 IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQD 626

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
              Y+ +SN+YA  GQW+ V++V+  MRERGV+K    SWVE+++ VHVF  +D  HP+ 
Sbjct: 627 GT-YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEV 685

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
             +   ++ L+ EMKK GY PDT   LHD + E K  SL  HSE+LA+ + ++  P G+ 
Sbjct: 686 QAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGAT 745

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I V KNLR C DCH A K ISK+  REI VRD  RFHHFK+G CSC ++W
Sbjct: 746 IRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 258/558 (46%), Gaps = 91/558 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFK 58
           +P  + V+   L+S Y  SGN+  A++LFN+  +  R  VS+  +I  YS  N    A  
Sbjct: 66  IPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALN 125

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           LFV M+  G   PD  TF+++LS  S   D       +H ++IK G   I  + N+L+  
Sbjct: 126 LFVQMKRYGFL-PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSC 184

Query: 118 YC---------KIRCLDLARRVFKEMPQKD------------------------------ 138
           Y            + +  AR+VF E P+                                
Sbjct: 185 YVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLT 244

Query: 139 ---SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA----GVGLADIA 191
               V++NA+I+G+ + GL EEA   F  M  +G +  ++T+ + +SA       +    
Sbjct: 245 YPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFN 304

Query: 192 LGRQVHAFVVKT------NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN- 244
            GRQVH ++++T      +FV  + V NAL+  Y+K+D ++EAR++F +MP  D +S+N 
Sbjct: 305 CGRQVHGYILRTVVEPSHHFV--LSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNA 362

Query: 245 ------------------------------VMITCYAWNEQYKESLKLFRELQFTRFDRS 274
                                         VMI+  A N   +E LKLF +++    +  
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            + F+  ++  +    L  G+QIH+Q I     S +   N+L+ MY++CG  E A+ +F 
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFL 482

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            + ++ +V W AMI+A  Q G+  +A+ LF +M + +I  D+ TF +IL A      +  
Sbjct: 483 TMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKE 542

Query: 395 GKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G+    +   R G        + L+D+  ++G    A    K MP E     W AL++ C
Sbjct: 543 GRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGC 602

Query: 453 AQNGDAQATLKSFEDMVQ 470
             +G+ +  +++ + +++
Sbjct: 603 RIHGNMELGIQAADRLLE 620



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 209/510 (40%), Gaps = 117/510 (22%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV------------- 238
           + R VHA ++ + F  N F+ N L+++Y K   +  ARKLF ++P+              
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82

Query: 239 --------------------DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
                               D VSYN MIT Y+       +L LF +++   F    F F
Sbjct: 83  SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142

Query: 279 STLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKCGR------------ 325
           S++LS ++   D +   Q +H + I    +    V N+L+  Y  C              
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202

Query: 326 ----FEE--------------------------AKEIFANLSHISTVPWTAMISAYVQKG 355
               F+E                          A+E+   L++   V W AMIS YV++G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASA----ELASLSLGKQLHSFVIRSGF---- 407
             EEA + F  M    I  D+ T+ S++ A      ++   + G+Q+H +++R+      
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322

Query: 408 -------------------------------MSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
                                          + ++ S +A+L  Y  +  +++A   F E
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           MPERN+++W  +IS  AQNG  +  LK F  M   G +P   +    ++ACS  G ++ G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            Q  +S   +           +++ +  R G  + AE +   MP+  D + W+++I +  
Sbjct: 443 -QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALA 500

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
            H +   A +  +Q+ K + L D   ++ +
Sbjct: 501 QHGHGVKAIELFEQMMKEDILPDRITFLTI 530


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 385/662 (58%), Gaps = 8/662 (1%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           L Q+HA II  G      + NSL+++Y     L  A+++F   P K+ VS+  LI+G AK
Sbjct: 40  LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAK 99

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
                EAI +F EM    FKP+  T ++ L A   L  I + + VH F V+  F  NVFV
Sbjct: 100 NDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFV 159

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             AL+D+YSK  C+  AR+LF  M E + VS+N +++ Y+ +   +E++ LF      R 
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLF---NLMRR 216

Query: 272 DRSQFPFSTLLSVVANKLD---LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                 F T++S++   L    LQ+G  IH   I T   ++  +  +L+D+Y      ++
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDD 276

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASA 387
           A  +F+ +       WT M++ +    + + A+  F +M    N+  D      IL + +
Sbjct: 277 AHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCS 336

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  G+++H+  I++ F +N+F GSA++DMYA  G+L+DA + F  M E+++V WNA
Sbjct: 337 HSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNA 396

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I+    NG     +  F  M  SG  PD  + +SVL ACSH G++ EGLQ F  M +  
Sbjct: 397 MIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTS 456

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
              P  +HYA ++DIL R+G  D A   +  MPF+PD  ++S+++ +CRIH N++   + 
Sbjct: 457 HDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI 516

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
           + ++F+ME   DA  YV +SN+YA+AG WE V   + ++R + ++K   +S +E+  +++
Sbjct: 517 SQKIFEMEP-NDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIY 575

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F A ++ HPQ  +I   ++ L+ ++KK GY P+T+  L D  +++K + L +HSE++AI
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           AF L+ T  G+ I + KNLR C DCH+A K +SK+ GR + ++D++RFH F+DG CSCRD
Sbjct: 636 AFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 748 FW 749
           +W
Sbjct: 696 YW 697



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 246/459 (53%), Gaps = 4/459 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            NT  +N L++ YV  G LA A+++F+    +  VSWTILI G ++ + F EA  +F +M
Sbjct: 54  HNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREM 113

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            T G   P+ VT +++L   +          VH   ++ G+   + +  +LVD Y K  C
Sbjct: 114 -TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGC 172

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + +AR++F+ M +++ VS+NA+++G++  G +EEAI LF  M+  G     +T  + + A
Sbjct: 173 MGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPA 232

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            + +  + +G  +H F+++T +  +  +  AL+D+Y  H+CV +A ++F EM   D  ++
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAW 292

Query: 244 NVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            +M+T ++    +  ++K F + L              +LS  ++   LQ GR++H   I
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAI 352

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   + + V ++++DMYA CG  E+AK  F  +     V W AMI+     G   +A++
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAID 412

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMY 421
           LF++M  + +  D++TF S+L A +    +  G Q+   ++++   + N+   + ++D+ 
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDIL 472

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            ++G L  A      MP + +   ++ L+ AC  +G+ +
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 196/367 (53%), Gaps = 3/367 (0%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+   +Q+HA ++ +    N F++N+L++ Y     + +A+++F   P  + VS+ ++
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+  A N+ + E++ +FRE+    F  +    S++L   AN   ++I + +H   +    
Sbjct: 94  ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V V  +LVDMY+K G    A+++F ++S  + V W A++S Y   G  EEA++LF  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  +  D  T  S++ AS  +  L +G  +H F+IR+G+ ++    +AL+D+Y     
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLS 485
           + DA + F EM  +++ +W  +++  +        +K F  M+     + DS+ L+ +LS
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +CSH G +++G +  +++  K          ++++D+    G  ++A++    M  E D 
Sbjct: 334 SCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391

Query: 546 IMWSSVI 552
           + W+++I
Sbjct: 392 VCWNAMI 398



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 2/296 (0%)

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S++    DL+  +QIH Q I +       ++NSL++ Y  CG   +AK+IF +    + V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT +IS   +     EA+++F EM   N   +  T +S+L A A L  + + K +H F 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           +R GF  NVF  +AL+DMY+K G +  A Q F+ M ERN+VSWNA++S  + +G ++  +
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAI 208

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M + G   D  +++S++ A    G ++ G    +    +      K    +++DI
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTG-IHGFIIRTGYENDKHIKTALMDI 267

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
                C D+A ++ ++M F  D   W+ ++      ++ + A K  +++  ++ L+
Sbjct: 268 YVSHNCVDDAHRVFSEM-FVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/627 (36%), Positives = 369/627 (58%), Gaps = 10/627 (1%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + + +  S+N++I   A+ G + EA++ F  M+ L  KP+  TF  A+ +   L D+ 
Sbjct: 110 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GRQ H   +   F  ++FV++AL+D+YSK   + +AR LF E+   + VS+  MIT Y 
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 229

Query: 252 WNEQYKESLKLFRELQFTRFDR--------SQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            N+    +L LF+E                      ++LS  +   +  I   +H   I 
Sbjct: 230 QNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIK 289

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                ++ V N+L+D YAKCG    ++ +F  ++    + W ++I+ Y Q G   E++ +
Sbjct: 290 RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEI 349

Query: 364 FIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M +   I+ +  T +++L A A   S  LGK +H  VI+ G  SNVF G++++DMY 
Sbjct: 350 FHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC 409

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A + F  M E+N+ SW+A+++    +G A+  L+ F +M  +G +P+ ++ +S
Sbjct: 410 KCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVS 469

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+ACSH GL+EEG  +F +M+ ++ + P  EHY  MVD+L R+G   EA  L+  M   
Sbjct: 470 VLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR 529

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W +++ +CR+HKN++  + +A +LF+++  ++   YV +SNIYA AG+WE V ++
Sbjct: 530 PDFVVWGALLGACRMHKNVDLGEISARKLFELDP-KNCGYYVLLSNIYADAGRWEDVERM 588

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+  G+ K   +S V++K +VHVF   D  HPQ  +I   +E L  ++++ GY PD 
Sbjct: 589 RILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDM 648

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           +  LHD   E K   L+ HSE+LA+AF ++NT  G+ I ++KNLR C DCH AIK ISKI
Sbjct: 649 TSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKI 708

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             REI VRDS RFHHF+DG CSC D+W
Sbjct: 709 VDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 220/453 (48%), Gaps = 24/453 (5%)

Query: 16  YVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYV 74
           Y  + NL T   LFN  VD+T V SW  +I   ++     EA + F  MR      P+  
Sbjct: 98  YSNNPNLTT---LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRS 153

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF   +  CS     +   Q H   + FG+   L + ++LVD Y K   L  AR +F E+
Sbjct: 154 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 213

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVE--MQHLGFKPSD------FTFAAALSAGVG 186
             ++ VS+ ++ITG+ +      A+ LF E  ++  G +             + LSA   
Sbjct: 214 SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSR 273

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +++ ++   VH F++K  F  ++ V N L+D Y+K   +  +R++F  M E D +S+N +
Sbjct: 274 VSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSI 333

Query: 247 ITCYAWNEQYKESLKLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           I  YA N    ES+++F R ++    + +    S +L   A+    ++G+ IH Q I   
Sbjct: 334 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 393

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S V V  S++DMY KCG+ E A++ F  +   +   W+AM++ Y   G+ +EAL +F 
Sbjct: 394 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 453

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQL-----HSFVIRSGFMSNVFSGSALLDM 420
           EM  A +  +  TF S+L A +    L  G        H F +  G    V     ++D+
Sbjct: 454 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG----VEHYGCMVDL 509

Query: 421 YAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
             ++G LK+A    K M  R + V W AL+ AC
Sbjct: 510 LGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 542



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 16/363 (4%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM----- 63
           ++ L+  Y K G L  AR LF+ +  R  VSWT +I GY Q +    A  LF +      
Sbjct: 190 SSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEES 249

Query: 64  --RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
               DG    D +   ++LS CS     +    VH  +IK G+   L + N+L+D+Y K 
Sbjct: 250 GSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKC 309

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
             L ++RRVF  M ++D +S+N++I  +A+ G++ E++++F  M   G    +  T +A 
Sbjct: 310 GELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 369

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A        LG+ +H  V+K     NVFV  +++D+Y K   V  ARK F  M E + 
Sbjct: 370 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 429

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQ 296
            S++ M+  Y  +   KE+L++F E+       +   F ++L+  ++   L+ G    + 
Sbjct: 430 KSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA 489

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           +  +  V   +        +VD+  + G  +EA ++   +      V W A++ A     
Sbjct: 490 MSHEFDVEPGVEHY---GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 546

Query: 356 NLE 358
           N++
Sbjct: 547 NVD 549


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/664 (36%), Positives = 377/664 (56%), Gaps = 52/664 (7%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
           T ++ +  H    +F  N++ I  N L+ SY +   +D A RVF++M  K +V++N+++ 
Sbjct: 22  TLSKYVSSHTHQHEFNNNNV-IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
            FAK                   KP  F +A               RQ+   + + N V 
Sbjct: 81  AFAK-------------------KPGHFEYA---------------RQLFEKIPQPNTVS 106

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
                N +L  +  H  V +AR  F  MP  D  S+N MI+  A      E+ +LF  + 
Sbjct: 107 ----YNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMP 162

Query: 268 FTRFDRSQFPFSTLLS--VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
               +++   +S ++S  V    LD  +      +      +  V    +++  Y K GR
Sbjct: 163 ----EKNCVSWSAMVSGYVACGDLDAAV------ECFYAAPMRSVITWTAMITGYMKFGR 212

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            E A+ +F  +S  + V W AMI+ YV+ G  E+ L LF  M    +  +  +  S+L  
Sbjct: 213 VELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLG 272

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            + L++L LGKQ+H  V +    S+  +G++L+ MY+K G LKDA + F ++P +++V W
Sbjct: 273 CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCW 332

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           NA+IS  AQ+G  +  L+ F++M + G +PD ++ ++VL AC+H GL++ G+QYFN+M +
Sbjct: 333 NAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRR 392

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            + +  K EHYA MVD+L R+G   EA  L+  MPF+P   ++ +++ +CRIHKNL  A+
Sbjct: 393 DFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAE 452

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
            AA  L +++    A  YV ++N+YA   +W+ V+ ++++M++  V K+  YSW+E+ S 
Sbjct: 453 FAAKNLLELDP-TIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSV 511

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F ++D LHP+   I  K+++L ++MK  GY PD    LHD  EE+K + L +HSE+L
Sbjct: 512 VHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKL 571

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF L+  P G PI V KNLR C DCH+A K IS I GREI VRD++RFHHFKDGFCSC
Sbjct: 572 AIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSC 631

Query: 746 RDFW 749
           RD+W
Sbjct: 632 RDYW 635



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 220/480 (45%), Gaps = 57/480 (11%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQK-NQFREAFKLFV 61
           N N +++N LI+ YV+ G++ +A  +F  M  ++ V+W  ++  +++K   F  A +LF 
Sbjct: 38  NNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFE 97

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            +                     +P+T +             YN I++ C+     +  +
Sbjct: 98  KI--------------------PQPNTVS-------------YN-IMLACH-----WHHL 118

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
              D AR  F  MP KD  S+N +I+  A+ GL  EA +LF  M     + +  +++A +
Sbjct: 119 GVHD-ARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMP----EKNCVSWSAMV 173

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           S  V   D  L   V  F      + +V    A++  Y K   V  A +LF EM     V
Sbjct: 174 SGYVACGD--LDAAVECFYAAP--MRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLV 229

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++N MI  Y  N + ++ L+LFR +  T    +    +++L   +N   LQ+G+Q+H   
Sbjct: 230 TWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLV 289

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                 S+     SLV MY+KCG  ++A E+F  +     V W AMIS Y Q G  ++AL
Sbjct: 290 CKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKAL 349

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDM 420
            LF EM +  +  D  TF ++L A      + LG Q  + + R  G  +     + ++D+
Sbjct: 350 RLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDL 409

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD------AQATLKSFEDMVQSGY 473
             ++G L +A+   K MP + +   +  L+ AC  + +      A   L   +  + +GY
Sbjct: 410 LGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGY 469



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 186/386 (48%), Gaps = 34/386 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  NTVS N++++ +     +  AR  F+SM  +   SW  +I   +Q     EA +LF
Sbjct: 99  IPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLF 158

Query: 61  VDMRTDGGSDPDYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M      + + V+++ ++SG   C + D A E    +A  ++      +I   +++  
Sbjct: 159 SAM-----PEKNCVSWSAMVSGYVACGDLDAAVECF--YAAPMR-----SVITWTAMITG 206

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   ++LA R+F+EM  +  V++NA+I G+ + G  E+ ++LF  M   G KP+  + 
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + L     L+ + LG+QVH  V K     +     +L+ +YSK   + +A +LF ++P 
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR 326

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V +N MI+ YA +   K++L+LF E++          F  +L    +   + +G Q 
Sbjct: 327 KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ- 385

Query: 298 HTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           +  T+      E K  +   +VD+  + G+  EA ++      I ++P+    + Y   G
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDL------IKSMPFKPHPAIY---G 436

Query: 356 NLEEALNLFIEMCRANISADQATFAS 381
            L  A       CR + + + A FA+
Sbjct: 437 TLLGA-------CRIHKNLNLAEFAA 455


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/694 (36%), Positives = 391/694 (56%), Gaps = 44/694 (6%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKEMPQKDSVSFNALITGFAK 151
           HA ++K G ++     + L++  C +      L  A  VF+   + + + +N ++ G A 
Sbjct: 2   HAQMVKTGLHNTNYALSKLLE-LCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK--------- 202
                  ++++V M   G  P+ +TF   L +         GRQ+HA V+K         
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 203 -TNFV---------------------ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
            T+ +                      +V    AL+  Y+    V  ARK+F  + E D 
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N MIT Y  N  Y+E+L+LF+E+  T     +    ++LS  A    +++GR+IHT 
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 301 TIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                   S +K+ N+ + +Y+KCG  E A  +F  LS    V W  +I  Y      +E
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL-- 417
           AL LF EM R+  S +  T  S+L A A L ++ +G+ +H ++ +   +  V +GSAL  
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKR--LKGVTNGSALRT 358

Query: 418 --LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
             +DMYAK G ++ A Q F  M  +++ SWNA+I   A +G A A    F  M ++G +P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D ++L+ +LSACSH GL++ G   F S+TQ Y + PK EHY  M+D+L  +G F EAE++
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MP EPD ++W S++ +C++H NLE A+  A +L ++E   ++  YV +SNIYA AG+
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEP-ENSGSYVLLSNIYATAGR 537

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           WE V+++++ +  +G++KV   S +E+ S VH F   D+LHPQ+ EI R +E +   +++
Sbjct: 538 WEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEE 597

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ + V+KNLR C +CH A
Sbjct: 598 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEA 657

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 658 TKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 216/475 (45%), Gaps = 37/475 (7%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F +  +   + W  ++ G +  +      +++V M    G  P+  TF  LL
Sbjct: 32  GLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRM-VSXGHVPNAYTFPFLL 90

Query: 81  SGCSEPDTANELIQVHADIIKFG-------YNSIL------------------------I 109
             C++  T  E  Q+HA ++K G       + S++                        +
Sbjct: 91  KSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVV 150

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
            C +L+  Y     +  AR+VF  + ++D VS+NA+ITG+ +    EEA++LF EM    
Sbjct: 151 SCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN 210

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEA 228
            +P + T  + LSA      I LGR++H  V   + F  ++ + NA + LYSK   V  A
Sbjct: 211 VRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIA 270

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
             LF  +   D VS+N +I  Y     YKE+L LF+E+  +    +     ++L   A+ 
Sbjct: 271 SGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 330

Query: 289 LDLQIGRQIHT--QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
             + IGR IH      +    +   +  SL+DMYAKCG  E A ++F ++ H S   W A
Sbjct: 331 GAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNA 390

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS- 405
           MI  +   G    A +LF  M +  I  D  T   +L A +    L LG+ +   V +  
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDY 450

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
                +     ++D+   +G  K+A +    MP E + V W +L+ AC  +G+ +
Sbjct: 451 NITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLE 505



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 180/363 (49%), Gaps = 8/363 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD- 62
           ++ VS   LI+GY   G++ +AR++F+ + +R  VSW  +I GY +   + EA +LF + 
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEM 206

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKI 121
           MRT+    PD  T  ++LS C++  +     ++H  +    G+ S L I N+ +  Y K 
Sbjct: 207 MRTN--VRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC 264

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +++A  +F+ +  KD VS+N LI G+    L +EA+ LF EM   G  P+D T  + L
Sbjct: 265 GDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVL 324

Query: 182 SAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A   L  I +GR +H ++ K          +  +L+D+Y+K   +  A ++F  M    
Sbjct: 325 PACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKS 384

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             S+N MI  +A + +   +  LF  ++    +        LLS  ++   L +GR I  
Sbjct: 385 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFK 444

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                  I+ +++    ++D+    G F+EA+EI   +      V W +++ A    GNL
Sbjct: 445 SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNL 504

Query: 358 EEA 360
           E A
Sbjct: 505 ELA 507


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/702 (38%), Positives = 410/702 (58%), Gaps = 15/702 (2%)

Query: 46  GYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANEL-----IQVHADII 100
           G  ++    EA KLF+DM +     P+  ++  LLS   E   A ++      +VH  +I
Sbjct: 3   GLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEQVGLKKGREVHGHVI 60

Query: 101 KFGYNSILI-ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
             G    ++ I N LV+ Y K   +  ARRVF  M +KDSVS+N++ITG  + G   EA+
Sbjct: 61  TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAV 120

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           + +  M+     P  FT  ++LS+   L    LG+Q+H   +K     NV V+NAL+ LY
Sbjct: 121 ERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 180

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ-YKESLKLFRELQFTRFDRSQFPF 278
           ++   + E RK+F  MPE D VS+N +I   A +E+   E++  F          ++  F
Sbjct: 181 AETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITF 240

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS- 337
           S++LS V++    ++G+QIH   +      E    N+L+  Y KCG  +  ++IF+ +S 
Sbjct: 241 SSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSE 300

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V W +MIS Y+    L +AL+L   M +     D   +A++L A A +A+L  G +
Sbjct: 301 RRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME 360

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+  +R+   S+V  GSAL+DMY+K G L  A++ F  MP RN  SWN++IS  A++G 
Sbjct: 361 VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQ 420

Query: 458 AQATLKSFEDMVQSGYQP-DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            +  LK F +M   G  P D V+ + VLSACSH GL+EEG ++F SM+  Y L P+ EH+
Sbjct: 421 GEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHF 480

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC-RIH-KNLEFAKKAADQLFKM 574
           + M D+L R+G  D+ E  + +MP +P+ ++W +V+ +C R + +  E  KKAA+ LF++
Sbjct: 481 SCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 540

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           E   +A  YV + N+YA  G+WE + + +K M++  V+K   YSWV +K  VH+F A D+
Sbjct: 541 EP-ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDK 599

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP T+ I +K++ L ++M+  GY P T  AL+D ++E K E L YHSE+LA+AF L   
Sbjct: 600 SHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQ 659

Query: 695 PEGS-PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
              + PI +MKNLR C DCH+A K ISKI GR+I +RDS+R+
Sbjct: 660 RSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 223/458 (48%), Gaps = 6/458 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G++A AR +F  M+++ +VSW  +I G  Q   F EA + +  MR     
Sbjct: 73  NGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRH-EI 131

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P   T  + LS C+    A    Q+H + +K G +  + + N+L+  Y +   L+  R+
Sbjct: 132 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 191

Query: 130 VFKEMPQKDSVSFNALITGFA-KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +F  MP+ D VS+N++I   A  E    EA+  F+     G K +  TF++ LSA   L+
Sbjct: 192 IFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLS 251

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVSYNVMI 247
              LG+Q+H   +K N  +     NAL+  Y K   +    K+F  M E  D V++N MI
Sbjct: 252 FGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 311

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + Y  NE   ++L L   +  T      F ++T+LS  A+   L+ G ++H  ++     
Sbjct: 312 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 371

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+V V ++LVDMY+KCGR + A   F  +   ++  W +MIS Y + G  EEAL LF  M
Sbjct: 372 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANM 431

Query: 368 -CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
                   D  TF  +L A +    L  G K   S     G    +   S + D+  ++G
Sbjct: 432 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAG 491

Query: 426 SLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATL 462
            L        +MP + N++ W  ++ AC +    +A L
Sbjct: 492 ELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAEL 529



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 61/461 (13%)

Query: 146 ITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTF------AAALSAGVGLADIALGRQVHA 198
           + G  ++   EEA KLF++M  +    P  +          +L+  VGL     GR+VH 
Sbjct: 1   MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKK---GREVHG 57

Query: 199 FVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
            V+ T  V+  V + N L+++Y+K   + +AR++F  M E D VS+N MIT    N  + 
Sbjct: 58  HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFI 117

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E+++ ++ ++        F   + LS  A+    ++G+QIH +++       V V+N+L+
Sbjct: 118 EAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 177

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV-QKGNLEEALNLFIEMCRANISADQ 376
            +YA+ G   E ++IF+++     V W ++I A    + +L EA+  F+   RA    ++
Sbjct: 178 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNR 237

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            TF+S+L A + L+   LGKQ+H   ++        + +AL+  Y K G +    + F  
Sbjct: 238 ITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSR 297

Query: 437 MPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS---------- 485
           M E R+ V+WN++IS    N      L     M+Q+G + DS    +VLS          
Sbjct: 298 MSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 357

Query: 486 -----AC--------------------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--S 518
                AC                    S CG ++  L++FN+M       P +  Y+  S
Sbjct: 358 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM-------PVRNSYSWNS 410

Query: 519 MVDILCRSGCFDEAEKLMAQMPFE----PDEIMWSSVINSC 555
           M+    R G  +EA KL A M  +    PD + +  V+++C
Sbjct: 411 MISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSAC 451



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 197/442 (44%), Gaps = 38/442 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFVDM 63
           N   +N L++ Y ++G L   R++F+SM +   VSW  +IG   S +    EA   F++ 
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 228

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G   + +TF+++LS  S         Q+H   +K+         N+L+  Y K   
Sbjct: 229 -LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 124 LDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           +D   ++F  M + +D V++N++I+G+    L  +A+ L   M   G +   F +A  LS
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +A +  G +VHA  V+     +V V +AL+D+YSK   +  A + F  MP  +  S
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 243 YNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +N MI+ YA + Q +E+LKLF  ++   +       F  +LS  ++   L+ G       
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG------- 460

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
                    K   S+ D Y    R E                ++ M     + G L++  
Sbjct: 461 --------FKHFESMSDSYGLAPRIEH---------------FSCMADLLGRAGELDKLE 497

Query: 362 NLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +   +M  + N+   +    +  RA+   A   LGK+    + +     N  +   L +M
Sbjct: 498 DFIDKMPVKPNVLIWRTVLGACCRANGRKA--ELGKKAAEMLFQLE-PENAVNYVLLGNM 554

Query: 421 YAKSGSLKDAIQTFKEMPERNI 442
           YA  G  +D ++  K+M + ++
Sbjct: 555 YAAGGRWEDLVKARKKMKDADV 576


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/749 (34%), Positives = 408/749 (54%), Gaps = 17/749 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT-DGGSDPDYV 74
           ++ SG+L+ A  LF+ +      ++  LI  YS  +    A  L +  R       P+  
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF   L  CS     +    +H   I  G  + L +  +L+D Y K  CL  A  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIK--LFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           P +D V++NA++ G+A  G+   A+   L ++MQ    +P+  T  A L        +A 
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 193 GRQVHAFVV----------KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           G  VHA+ +          K+   + V +  ALLD+Y+K   ++ AR++F  MP  + V+
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 243 YNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           ++ +I  +    +  ++  LF+ +  Q   F  S    ++ L   A+   L++G Q+H  
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              +   +++   NSL+ MYAK G  ++A  +F  ++   TV ++A++S YVQ G  EEA
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
             +F +M   N+  D AT  S++ A + LA+L  G+  H  VI  G  S     +AL+DM
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G +  + Q F  MP R+IVSWN +I+    +G  +     F +M   G+ PD V+ 
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           + +LSACSH GL+ EG  +F+ M   Y L P+ EHY  MVD+L R G  DEA + +  MP
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
              D  +W +++ +CR++KN++  KK +  + ++        +V +SNIY+ AG+++  +
Sbjct: 606 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP-EGTGNFVLLSNIYSAAGRFDEAA 664

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +V+   + +G +K    SW+E+   +H F   D+ HPQ+ EI R+++N++  +KK GY+P
Sbjct: 665 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 724

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
           DTS  L D +EE K ++L  HSE+LAIA+ +++  E   I V KNLR C DCH  IK IS
Sbjct: 725 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHIS 784

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +  R I VRD++RFHHFK+G CSC DFW
Sbjct: 785 LLKRRAIIVRDANRFHHFKNGQCSCGDFW 813


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/756 (34%), Positives = 401/756 (53%), Gaps = 84/756 (11%)

Query: 77  ATLLSGCSEPDTANELIQVH---------ADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           A LL   S P     LI ++         A + +   +   +   SLV ++     L  A
Sbjct: 54  ADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDA 113

Query: 128 RRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAG 184
              F  +P  ++D+V  NA+++ FA+  L   A+ +F  +   G  +P D++F A +SA 
Sbjct: 114 AAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAV 173

Query: 185 VGLADIALGR--QVHAFVVKTNFVENVFVANALLDLYSKHD---CVVEARKLFGEMP--- 236
             + ++A     Q+H  V+K+     + V+NAL+ LY K D      +ARK+  EMP   
Sbjct: 174 GQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKD 233

Query: 237 -------------------------EVDG---VSYNVMITCYAWNEQYKESLKLFRELQF 268
                                    EVDG   V +N MI+ Y  +    ++ +LFR +  
Sbjct: 234 DLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVS 293

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT----TAISEVKVANSLVDMYAKCG 324
            +    +F F+++LS  AN      G+ +H Q I         + + V N+LV +Y+K G
Sbjct: 294 EKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGG 353

Query: 325 R-------------------------------FEEAKEIFANLSHISTVPWTAMISAYVQ 353
           +                                ++A E+F  + + + + W  M+S YV 
Sbjct: 354 KIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVH 413

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            G  E+AL LF +M   ++     T+A  + A  EL +L  G+QLH+ +++ GF ++  +
Sbjct: 414 GGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA 473

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G+ALL MYAK G++ DA   F  MP  + VSWNA+ISA  Q+G  +  L+ F+ MV  G 
Sbjct: 474 GNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI 533

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            PD +S L++L+AC+H GL++EG  YF SM + + + P ++HYA ++D+L RSG   EA 
Sbjct: 534 DPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEAR 593

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
            L+  MPFEP   +W ++++ CR + ++EF   AADQLF+M    D   Y+ +SN Y+ A
Sbjct: 594 DLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGT-YILLSNTYSAA 652

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+W   ++V+K MR+RGV+K    SW+E+ SK+HVF   D  HP+  E+ + +E +   M
Sbjct: 653 GRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARM 712

Query: 654 KKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCH 713
           +K GY PDT   LHD +   K   L  HSE+LA+ F L+  P G+ + V+KNLR C DCH
Sbjct: 713 RKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCH 772

Query: 714 AAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            A+  +SK  GREI VRD  RFHHFKDG CSC ++W
Sbjct: 773 TAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 229/533 (42%), Gaps = 75/533 (14%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKL 59
           P+   V+   L++ +  +G L  A   F+++    R  V    ++  +++ +    A  +
Sbjct: 90  PDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 149

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDS 117
           F  +   G   PD  +F  L+S   +     A    Q+H  ++K G  ++L + N+L+  
Sbjct: 150 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 209

Query: 118 YCKIRCLDL---ARRVFKEMPQKDSVSF-------------------------------N 143
           Y K    +    AR+V  EMP KD +++                               N
Sbjct: 210 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 269

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK- 202
           A+I+G+ + G+  +A +LF  M        +FTF + LSA         G+ VH  +++ 
Sbjct: 270 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 329

Query: 203 -TNFVEN--VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------------- 244
             NFV    + V NAL+ LYSK   +V A+++F  M   D VS+N               
Sbjct: 330 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 389

Query: 245 ----------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
                           VM++ Y      +++LKLF +++        + ++  ++     
Sbjct: 390 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 449

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L+ GRQ+H   +     +     N+L+ MYAKCG   +A+ +F  + ++ +V W AMI
Sbjct: 450 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMI 509

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GF 407
           SA  Q G+  EAL LF +M    I  D+ +F +IL A      +  G      + R  G 
Sbjct: 510 SALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 569

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
                  + L+D+  +SG + +A    K MP E     W A++S C  NGD +
Sbjct: 570 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 38/395 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ ++   ++ GYV+ G++  AR +F  +  +  V W  +I GY Q     +AF+LF
Sbjct: 229 MPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELF 288

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------- 107
             M ++     D  TF ++LS C+          VH  II+   N +             
Sbjct: 289 RRMVSE-KVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVT 347

Query: 108 ----------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
                                 ++  N+++  Y    CLD A  VFK MP K+ +S+  +
Sbjct: 348 LYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVM 407

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++G+   GL+E+A+KLF +M+    KP D+T+A A++A   L  +  GRQ+HA +V+  F
Sbjct: 408 VSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGF 467

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +    NALL +Y+K   V +AR +F  MP +D VS+N MI+    +   +E+L+LF +
Sbjct: 468 EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQ 527

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCG 324
           +     D  +  F T+L+   +   +  G            IS  +   + L+D+  + G
Sbjct: 528 MVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSG 587

Query: 325 RFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           R  EA+++   +    T   W A++S     G++E
Sbjct: 588 RIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMV----DRTAVSWTILIGGYSQKNQFREA 56
           MPN ++VS N +IS   + G+   A ELF+ MV    D   +S+  ++   +      E 
Sbjct: 497 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 556

Query: 57  FKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQVHA-DIIKFGYNSILIICN 112
           F  F  M+ D G  P    Y     LL        A +LI+    +     + +IL  C 
Sbjct: 557 FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 616

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP 172
           +  D        D   ++F+ +PQ D  ++  L   ++  G   +A ++   M+  G K 
Sbjct: 617 TNGDMEFGAYAAD---QLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 672

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVV 201
                        G + I +G ++H F+V
Sbjct: 673 EP-----------GCSWIEVGSKIHVFLV 690


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 385/662 (58%), Gaps = 8/662 (1%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           L Q+HA II  G      + NSL+++Y     L  A+++F   P K+ VS+  LI+G AK
Sbjct: 40  LQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAK 99

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
                EAI +F EM    FKP+  T ++ L A   L  I + + VH F V+  F  NVFV
Sbjct: 100 NDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFV 159

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             AL+D+YSK  C+  AR+LF  M E + V++N +++ Y+ +   +E++ LF      R 
Sbjct: 160 ETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF---NLMRR 216

Query: 272 DRSQFPFSTLLSVVANKLD---LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                 F T++S++   L    LQ+G  IH   I T   ++  +  +L+D+Y      ++
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDD 276

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASA 387
           A  +F+ +S      WT M++ +    + + A+  F +M    N+  D      IL + +
Sbjct: 277 AHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCS 336

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  G+++H+  I++ F +N+F GSA++DMYA  G+L+DA + F  M E+++V WNA
Sbjct: 337 HSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNA 396

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I+    NG     +  F  M  SG  PD  + +SVL ACSH G++ EGLQ F  M +  
Sbjct: 397 MIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTS 456

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            + P  +HYA ++DIL R+G  D A   +  MPF+PD  ++S+++ +CRIH N++   + 
Sbjct: 457 HVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI 516

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
           + ++F+ME   DA  YV +SN+YA+AG WE V   + ++R + ++K   +S +E+  +++
Sbjct: 517 SQKIFEMEP-NDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIY 575

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F A ++ HPQ  +I   ++ L+ ++KK GY P+T+  L D  +++K + L +HSE++AI
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           AF L+ T   + I + KNLR C DCH A K +SK+ GR + ++D++RFH F+DG CSCRD
Sbjct: 636 AFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 748 FW 749
           +W
Sbjct: 696 YW 697



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 245/459 (53%), Gaps = 4/459 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            NT  +N L++ YV  G LA A+++F+    +  VSWTILI G ++ + F EA  +F +M
Sbjct: 54  HNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREM 113

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G   P+ VT +++L   +          VH   ++ G+   + +  +LVD Y K  C
Sbjct: 114 IM-GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGC 172

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + +AR++F+ M +++ V++NA+++G++  G +EEAI LF  M+  G     +T  + + A
Sbjct: 173 MGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPA 232

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            + +  + +G  +H F+++T +  +  +  AL+D+Y  H+CV +A ++F EM   D  ++
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAW 292

Query: 244 NVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            +M+T ++    +  ++K F + L              +LS  ++   LQ GR++H   I
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAI 352

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   + + V ++++DMYA CG  E+AK  F  +     V W AMI+     G   +A++
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAID 412

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMY 421
           LF++M  + +  D++TF S+L A +    +  G Q+   +++ S  + N+   + ++D+ 
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDIL 472

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            ++G L  A      MP + +   ++ L+ AC  +G+ +
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 197/367 (53%), Gaps = 3/367 (0%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+   +Q+HA ++ +    N F++N+L++ Y     + +A+++F   P  + VS+ ++
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+  A N+ + E++ +FRE+    F  +    S++L   AN   ++I + +H   +    
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V V  +LVDMY+K G    A+++F ++S  + V W A++S Y   G  EEA++LF  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  +  D  T  S++ AS  +  L +G  +H F+IR+G+ ++    +AL+D+Y     
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLS 485
           + DA + F EM  +++ +W  +++  +        +K F  M+     + DS++L+ +LS
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +CSH G +++G +  +++  K          ++++D+    G  ++A++    M  E D 
Sbjct: 334 SCSHSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDV 391

Query: 546 IMWSSVI 552
           + W+++I
Sbjct: 392 VCWNAMI 398



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 155/296 (52%), Gaps = 2/296 (0%)

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S++    DL+  +QIH Q I +       ++NSL++ Y  CG   +AK+IF +  + + V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT +IS   +     EA+++F EM   N   +  T +S+L A A L  + + K +H F 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           +R GF  NVF  +AL+DMY+K G +  A Q F+ M ERN+V+WNA++S  + +G ++  +
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M + G   D  +++S++ A    G ++ G    +    +      K    +++DI
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTG-IHGFIIRTGYENDKHIKTALMDI 267

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
                C D+A ++ ++M  + D   W+ ++      ++ + A K  +++  ++ L+
Sbjct: 268 YVSHNCVDDAHRVFSEMSVK-DVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/724 (35%), Positives = 398/724 (54%), Gaps = 49/724 (6%)

Query: 69  SDPDYVTF-----ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR- 122
           SDP Y +       +LL  C    T   L  +HA +IK G ++     + L++  C I  
Sbjct: 24  SDPPYDSLRNHPSLSLLHNCK---TLQSLRLIHAQMIKTGLHNTNYALSKLLE-LCVISP 79

Query: 123 ---CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L  A  VF+ + + + + +N +  G A       A+KL+V M  LG  P+ +TF  
Sbjct: 80  HFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDC 224
            L +         G+Q+H  V+K  +  ++FV  +L+ +Y               S H  
Sbjct: 140 LLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD 199

Query: 225 VVE----------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           VV                 A+KLF E+P  D VS+N MI+ YA    YKE+L+LF+E+  
Sbjct: 200 VVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
           T     +    T++S  A    +++GRQ+H+        S +K+ NSL+D+Y+KCG  E 
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  L +   + W  +I  Y      +EAL LF EM R+    +  T  SIL A A 
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379

Query: 389 LASLSLGKQLHSFV---IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           L ++ +G+ +H ++   ++S   ++    ++L+DMYAK G ++ A Q F  +  +++ SW
Sbjct: 380 LGAIDIGRWIHVYIDKRLKSATNASSLR-TSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           NA+I   A +G A A    F  M + G +PD ++ + +LSACS  G+++ G   F +MTQ
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            YK+ PK EHY  M+D+L  SG F EAE+++  M  EPD ++W S++ +C+I  N+E  +
Sbjct: 499 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGE 558

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
             A  L K+E   +   YV +SNIYA AG+W  V++++  + ++G++KV   S +E+ S 
Sbjct: 559 SFAQNLIKIEP-ENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSV 617

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F   D+ HP+  EI   +E +   ++K G+ PDTS  L + +EE K  +L++HSE+L
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 677

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF LI+T  G+ + ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC
Sbjct: 678 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 737

Query: 746 RDFW 749
            D+W
Sbjct: 738 NDYW 741



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 219/469 (46%), Gaps = 32/469 (6%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+++ VS   LI GY   G + +A++LF+ +  +  VSW  +I GY++   ++EA +LF 
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +M       PD  T  T++S C++  +     QVH+ I   G+ S L I NSL+D Y K 
Sbjct: 256 EM-MKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKC 314

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ A  +F+ +  KD +S+N LI G+    L +EA+ LF EM   G +P+D T  + L
Sbjct: 315 GELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSIL 374

Query: 182 SAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A   L  I +GR +H ++ K   +      +  +L+D+Y+K   +  A ++F  +    
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-H 298
             S+N MI  +A + +   +  +F  ++    +     F  LLS  +    L +GR I  
Sbjct: 435 LSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFR 494

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
           T T       +++    ++D+    G F+EA+E+  N+      V W +++ A   +GN+
Sbjct: 495 TMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNV 554

Query: 358 E------------EALNLFIEMCRANISADQATFASILRASAEL-----------ASLSL 394
           E            E  N    +  +NI A    +  + +  A L           +S+ +
Sbjct: 555 ELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEI 614

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLD----MYAKSGSLKDAIQTFKEMPE 439
              +H F+I   F         +L+    +  K+G + D  +  +EM E
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/658 (35%), Positives = 383/658 (58%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y ++G+L+ A+ LF+++  + +V W +++ GY +      A K+F++MR      P
Sbjct: 99  LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE-IKP 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA +LS C+     +   Q+H   +  G      + N+L+  Y K +CL  AR++F
Sbjct: 158 NSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLF 217

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
              PQ D VS+N +I+G+ + GL  EA  LF  M   G KP   TFA+ L     L  + 
Sbjct: 218 DTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLK 277

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             +++H ++++   V +VF+ +AL+D+Y K   V  A+K+  +    D V    MI+ Y 
Sbjct: 278 HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYV 337

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N + KE+L+ FR L   R   +   FS++    A    L +G+++H   I T    +  
Sbjct: 338 LNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCH 397

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++++DMYAKCGR + A  +F  ++    + W +MI++  Q G   EA+NLF +M    
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + +  L A A L +L  GK++H  +I+    S++++ S+L+DMYAK G+L  + 
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSR 517

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M ERN VSWN++ISA   +GD +  L  F +M+++G QPD V+ L ++SAC H G
Sbjct: 518 RVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAG 577

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EG++Y++ MT++Y +  + EHYA + D+  R+G  DEA + +  MPF PD  +W ++
Sbjct: 578 QVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTL 637

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C IH N+E A+ A+  LF ++ L ++  YV ++N+ A AG+W  V +V+  M+ERGV
Sbjct: 638 LGACHIHGNVELAEVASKHLFDLDPL-NSGYYVLLANVQAGAGKWRKVLKVRSIMKERGV 696

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           RKV  YSW+E+ +  H+F A D  HP T +I   +++L+ E+KKEGY P     +H +
Sbjct: 697 RKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYLPMHPQ 754



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/580 (31%), Positives = 294/580 (50%), Gaps = 3/580 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YV++G+L  A+ LF ++      +W  +I G++   QF  A   ++ M    G  PD  T
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKM-LGAGVSPDKYT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  ++  C    +      VH  +   G    + + +SL+  Y +   L  A+ +F  +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           QKDSV +N ++ G+ K G +  AIK+F+EM+H   KP+  TFA  LS     A + LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   V      +  VAN LL +YSK  C+  ARKLF   P+ D VS+N +I+ Y  N  
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             E+  LFR +           F++ L  V   L L+  ++IH   I    + +V + ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y KC   E A++I    S   TV  T MIS YV  G  +EAL  F  + +  +   
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             TF+SI  A A LA+L+LGK+LH  +I++        GSA+LDMYAK G L  A + F 
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            + E++ + WN++I++C+QNG     +  F  M   G + D VS+   LSAC++   +  
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G +    M  K  LR      +S++D+  + G  + + ++  +M  E +E+ W+S+I++ 
Sbjct: 481 GKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSIISAY 538

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
             H +L+       ++ +     D   ++ + +    AGQ
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQ 578



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 242/473 (51%), Gaps = 12/473 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K   L  AR+LF++      VSW  +I GY Q     EA  LF  M    G 
Sbjct: 198 NTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM-ISAGI 256

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TFA+ L   +E  +     ++H  II+      + + ++L+D Y K R +++A++
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQK 316

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +  +    D+V    +I+G+   G N+EA++ F  +     KP+  TF++   A  GLA 
Sbjct: 317 ILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAA 376

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+++H  ++KT   E   V +A+LD+Y+K   +  A ++F  + E D + +N MIT 
Sbjct: 377 LNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITS 436

Query: 250 YAWNEQYKESLKLFRE--LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            + N +  E++ LFR+  ++ TR+D      S  LS  AN   L  G++IH   I     
Sbjct: 437 CSQNGRPGEAINLFRQMGMEGTRYD--CVSISGALSACANLPALHYGKEIHGLMIKGPLR 494

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++   +SL+DMYAKCG    ++ +F  +   + V W ++ISAY   G+L+E L LF EM
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEM 554

Query: 368 CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            R  I  D  TF  I+ A      +  G +  H      G  + +   + + DM+ ++G 
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ----ATLKSFE-DMVQSGY 473
           L +A +T   MP   +   W  L+ AC  +G+ +    A+   F+ D + SGY
Sbjct: 615 LDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGY 667



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 2/236 (0%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY + G  ++AK +F  L    T  W  MI  +   G    AL  +++M  A +S D+ T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F  +++A   L S+ +GK +H  V   G   +VF GS+L+ +YA++G L DA   F  +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +++ V WN +++   +NGD+   +K F +M  S  +P+SV+   VLS C+   +++ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             + +     L        +++ +  +  C   A KL    P + D + W+ +I+ 
Sbjct: 181 -LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSP-QSDLVSWNGIISG 234


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/672 (35%), Positives = 376/672 (55%), Gaps = 36/672 (5%)

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FK 171
           S++  + + R    AR VF E P + +  +   I+G A+ G   + ++ F EM   G   
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+ F  AA +    G+ D+  G++VH ++++     +V + NA+LD+Y+K      AR++
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169

Query: 232 FGEMPEVDGVSYNVMI-TCY---------------------AWNE---------QYKESL 260
           FG M E D VS+N+ I  C                      +WN             ++L
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
              R +       + + +ST   +    L   +GRQ+H + ++     +  V +SL+DMY
Sbjct: 230 SHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMY 289

Query: 321 AKCGRFEEAKEIFANLSHIS---TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            KCG  E A  +F + S ++      W+ M++ YVQ G  EEAL+LF  M R  ++AD+ 
Sbjct: 290 CKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRF 349

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T  S+  A A +  +  G+Q+H  V +  +  +    SA++DMYAK G+L+DA   F   
Sbjct: 350 TLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             +NI  W +++ + A +G  +  ++ FE M      P+ ++L+ VLSACSH GL+ EG 
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGE 469

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YF  M ++Y + P  EHY  +VD+  RSG  D+A+  + +     + I+W +++++CR+
Sbjct: 470 LYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL 529

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           H++ E+AK A+++L ++E+  DA  YV +SNIYA   +W    +++ +M+ER VRK    
Sbjct: 530 HQHNEYAKLASEKLVQLEQC-DAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGR 588

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW+ LK+ VH F A D  HPQ+ EI   +E L++ +K+ GY   T   +HD ++E +  +
Sbjct: 589 SWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETA 648

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           LK+HSE+LAIAF +I+TP G+P+ + KNLR C DCH AIK IS  TGREI VRD  RFHH
Sbjct: 649 LKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHH 708

Query: 738 FKDGFCSCRDFW 749
           FKD  CSC DFW
Sbjct: 709 FKDASCSCEDFW 720



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 227/497 (45%), Gaps = 48/497 (9%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           +V+      AR +F+    RTA  WT+ I G +++ ++ +  + F +M  +G + P+   
Sbjct: 55  WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFV 114

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM- 134
            A ++  C+         +VH  +++ G +  +++CN+++D Y K    + ARRVF  M 
Sbjct: 115 LAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA 174

Query: 135 ------------------------------PQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
                                         P +D+ S+N +I+G  + G   +A+     
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M   G   + +T++ A      L    LGRQ+H  V+      + FV ++L+D+Y K   
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294

Query: 225 VVEARKLFGEMPEVD---GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
           +  A  +F     +      +++ M+  Y  N + +E+L LFR +        +F  +++
Sbjct: 295 LEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
            +  AN   ++ GRQ+H          +  +A+++VDMYAKCG  E+A+ IF      + 
Sbjct: 355 AAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNI 414

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG----KQ 397
             WT+M+ +Y   G    A+ LF  M    ++ ++ T   +L A + +  +S G    KQ
Sbjct: 415 AVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQ 474

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI----VSWNALISACA 453
           +       G + ++   + ++D+Y +SG L D  + F E  E NI    + W  L+SAC 
Sbjct: 475 MQE---EYGIVPSIEHYNCIVDLYGRSG-LLDKAKNFIE--ENNINHEAIVWKTLLSACR 528

Query: 454 QNGDAQATLKSFEDMVQ 470
            +   +    + E +VQ
Sbjct: 529 LHQHNEYAKLASEKLVQ 545



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 49/388 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD-- 62
           + V  N ++  Y K G    AR +F +M +R AVSW I IG   Q      + +LF +  
Sbjct: 146 DVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESP 205

Query: 63  --------------MRTDGGSDP--------------DYVTFAT--LLSG-CSEPDTANE 91
                         MR+   +D               ++ T++T  +L+G    PD    
Sbjct: 206 LRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGR- 264

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE---MPQKDSVSFNALITG 148
             Q+H  ++         + +SL+D YCK   L+ A  VF     + +  + +++ ++ G
Sbjct: 265 --QLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAG 322

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           + + G  EEA+ LF  M   G     FT  +  +A   +  +  GRQVH  V K  +  +
Sbjct: 323 YVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLD 382

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
             +A+A++D+Y+K   + +AR +F      +   +  M+  YA + Q + +++LF  +  
Sbjct: 383 APLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTA 442

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            +   ++     +LS  ++   +  G    +Q+  +  +  +I      N +VD+Y + G
Sbjct: 443 EKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHY---NCIVDLYGRSG 499

Query: 325 RFEEAKEIFA--NLSHISTVPWTAMISA 350
             ++AK      N++H + V W  ++SA
Sbjct: 500 LLDKAKNFIEENNINHEAIV-WKTLLSA 526



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 7/170 (4%)

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-Y 473
           +++L  + +     DA   F E P R    W   IS CA+ G     +++F +M+  G  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P++  L +V+  C+  G +E G +    M +   +        +++D+  + G F+ A 
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-GVHLDVVLCNAVLDMYAKCGQFERAR 167

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
           ++   M  E D + W+  I +C    ++      + QLF    LRD   +
Sbjct: 168 RVFGAMA-ERDAVSWNIAIGACIQSGDI----LGSMQLFDESPLRDTTSW 212


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/668 (35%), Positives = 391/668 (58%), Gaps = 16/668 (2%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VHA +IK G +    + + LV+ Y K   +  AR+VF  +P+++ V +  L+TG+ +   
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            E A+++F +M   G  PS+FT + AL+A   L  I LG+Q HAF++K     +  + NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L  LYSK   +  + K F E  E D +S+  +I+    N +    L+LF E+ F   + +
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F  +++LS+ +      +G Q+H+ +      S +++ NSLV +Y KCG  +EAK +F 
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 335 NLSHISTVPWTAMISAYVQKGNL-----------EEALNLFIEMCRANISADQATFASIL 383
            + + + + W AMI+ + Q  +L            EAL +++++ R+    D  T +SIL
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
              + LA+L  G+Q+H+  I+SGF+S+V  G+AL+DMY K GS++ A + F +M  R ++
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SW ++I++ A++G +Q  L+ FEDM  +G++P+ ++ + VL+ACSH G+++E L+YF  M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            ++YK++P  +HY  +VD+  R G  DEA  ++ +M  EP+E +W  +I  CR H N E 
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
              AA+QL K+ K R    YV + N+Y  A +WE VS V++ M+E  V K+  +S + +K
Sbjct: 482 GFYAAEQLLKL-KPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIK 540

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV----ESLK 679
            +VH F  N+ LH    E+   + +L+   K  GY+   +  + D++EE        S  
Sbjct: 541 GEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAV 600

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           YHSE+LA+ F L+NTP G+PI V+K++  C DCH  +K++S  T R I ++D  R H F 
Sbjct: 601 YHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFV 660

Query: 740 DGFCSCRD 747
           +G CSC D
Sbjct: 661 NGQCSCAD 668



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 242/486 (49%), Gaps = 16/486 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G +  AR++F+++  R  V WT L+ GY Q +Q   A ++F DM  + GS P
Sbjct: 21  LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDM-LESGSFP 79

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              T +  L+ CS  ++     Q HA IIK+  +    I N+L   Y K   LD + + F
Sbjct: 80  SNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAF 139

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +E  +KD +S+  +I+     G     ++LF+EM     +P+DFT  + LS    +    
Sbjct: 140 RETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSD 199

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LG QVH+   K     N+ + N+L+ LY K  C+ EA+ LF  M   + +++N MI  +A
Sbjct: 200 LGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHA 259

Query: 252 W-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                        +   E+L ++ +L  +      F  S++L+V +    L+ G QIH Q
Sbjct: 260 QAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQ 319

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TI +  +S+V V  +LVDMY KCG  E A++ F ++S  + + WT+MI+++ + G  + A
Sbjct: 320 TIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHA 379

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLD 419
           L LF +M  A    +Q TF  +L A +    +    +    + +   +  V      L+D
Sbjct: 380 LQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVD 439

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           M+ + G L +A    K M  E N   W  LI+ C  +G+ +    + E +++   +P S 
Sbjct: 440 MFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLK--LKPRST 497

Query: 479 SLLSVL 484
               VL
Sbjct: 498 ETYVVL 503



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 14/197 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-----KNQFR------EAF 57
           TN L+  Y+K G +  A+ LFN M  +  ++W  +I G++Q     K+ F       EA 
Sbjct: 220 TNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEAL 279

Query: 58  KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
            +++ +    G  PD  T +++L+ CS      +  Q+HA  IK G+ S +++  +LVD 
Sbjct: 280 GMYLKLNRS-GRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDM 338

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   ++ AR+ F +M  +  +S+ ++IT FA+ G ++ A++LF +M+  GF+P+  TF
Sbjct: 339 YDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITF 398

Query: 178 AAALSA--GVGLADIAL 192
              L+A    G+ D AL
Sbjct: 399 VGVLAACSHAGMVDEAL 415


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/746 (34%), Positives = 406/746 (54%), Gaps = 7/746 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM---RTD 66
           N L+S Y   G +  A +LF+ M +R  VSW  +I  +S      E+F L  +M     D
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   PD  T  T+L  C+          VH   +K   +  L++ N+L+D Y K  C+  
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAG 184
           A+ +FK    K+ VS+N ++ GF+ EG       +  +M   G   K  + T   A+   
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              + +   +++H + +K  FV N  VANA +  Y+K   +  A+++F  +      S+N
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  +A +   + SL    +++ +      F   +LLS  +    L++G+++H   I  
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               ++ V  S++ +Y  CG     + +F  +   S V W  +I+ Y+Q G  + AL +F
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    I     +   +  A + L SL LG++ H++ ++     + F   +L+DMYAK+
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS+  + + F  + E++  SWNA+I     +G A+  +K FE+M ++G+ PD ++ L VL
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA-QMPFEP 543
           +AC+H GLI EGL+Y + M   + L+P  +HYA ++D+L R+G  D+A +++A +M  E 
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W S+++SCRIH+NLE  +K A +LF++E       YV +SN+YA  G+WE V +V+
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP-EKPENYVLLSNLYAGLGKWEDVRKVR 824

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           + M E  +RK    SW+EL  KV  F   +       EI+     L  ++ K GY+PDT 
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
              HD  EE K+E L+ HSE+LA+ + LI T EG+ I V KNLR C DCH A KLISK+ 
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD+ RFHHFK+G CSC D+W
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 274/582 (47%), Gaps = 12/582 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N + + T  +I+ Y   G+   +R +F+++  +    W  +I  YS+   + E  + F
Sbjct: 116 LRNDDVLCTR-IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           ++M +     PD+ T+  ++  C+        + VH  ++K G    + + N+LV  Y  
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT 234

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFT 176
              +  A ++F  MP+++ VS+N++I  F+  G +EE+  L  EM        F P   T
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               L       +I LG+ VH + VK    + + + NAL+D+YSK  C+  A+ +F    
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL--LSVVANKLDLQIG 294
             + VS+N M+  ++       +  + R++     D      + L  + V  ++  L   
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           +++H  ++    +    VAN+ V  YAKCG    A+ +F  +   +   W A+I  + Q 
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
            +   +L+  ++M  + +  D  T  S+L A ++L SL LGK++H F+IR+    ++F  
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
            ++L +Y   G L      F  M ++++VSWN +I+   QNG     L  F  MV  G Q
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
              +S++ V  ACS    +  G +  ++   K+ L        S++D+  ++G   ++ K
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           +   +  E     W+++I    IH     AK+A     +M++
Sbjct: 654 VFNGLK-EKSTASWNAMIMGYGIHG---LAKEAIKLFEEMQR 691



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 211/457 (46%), Gaps = 10/457 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  V  N L+  Y K G +  A+ +F    ++  VSW  ++GG+S +      F +   
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383

Query: 63  MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
           M   GG D   D VT    +  C        L ++H   +K  F YN   ++ N+ V SY
Sbjct: 384 MLA-GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--LVANAFVASY 440

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   L  A+RVF  +  K   S+NALI G A+      ++   ++M+  G  P  FT  
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + LSA   L  + LG++VH F+++     ++FV  ++L LY     +   + LF  M + 
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             VS+N +IT Y  N     +L +FR++              +    +    L++GR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +      +  +A SL+DMYAK G   ++ ++F  L   ST  W AMI  Y   G  +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
           EA+ LF EM R   + D  TF  +L A      +  G + L       G   N+   + +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 418 LDMYAKSGSLKDAIQTF-KEMPERNIVS-WNALISAC 452
           +DM  ++G L  A++   +EM E   V  W +L+S+C
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 777



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N  ++ Y K G+L+ A+ +F+ +  +T  SW  LIGG++Q N  R +    + M+
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD  T  +LLS CS+  +     +VH  II+      L +  S++  Y     L
Sbjct: 489 IS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
              + +F  M  K  VS+N +ITG+ + G  + A+ +F +M   G +    +      A 
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  + LGR+ HA+ +K    ++ F+A +L+D+Y+K+  + ++ K+F  + E    S+N
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  +   KE++KLF E+Q T  +     F  +L+   +   +  G +   Q   +
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVP-WTAMISAYVQKGNLE 358
             +   +K    ++DM  + G+ ++A  + A  +S  + V  W +++S+     NLE
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 148/280 (52%), Gaps = 8/280 (2%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHI 339
           LL     + D+++GR+IH     +T +    V    ++ MYA CG  ++++ +F  L   
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
           +   W A+IS+Y +    +E L  FIEM    ++  D  T+  +++A A ++ + +G  +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  V+++G + +VF G+AL+  Y   G + DA+Q F  MPERN+VSWN++I   + NG +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 459 QATLKSFEDMVQ----SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           + +     +M++      + PD  +L++VL  C+    I  G +  +    K +L  +  
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELV 328

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              +++D+  + GC   A+ ++ +M    + + W++++  
Sbjct: 329 LNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGG 367


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/739 (33%), Positives = 425/739 (57%), Gaps = 7/739 (0%)

Query: 13  ISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
           + G+  S  +  A +LF+ M    A  W ++I G++    + EA + +  M    G   D
Sbjct: 71  LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKAD 129

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             T+  ++   +   +  E  ++HA +IK G+ S + +CNSL+  Y K+ C   A +VF+
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           EMP++D VS+N++I+G+   G    ++ LF EM   GFKP  F+  +AL A   +    +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249

Query: 193 GRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           G+++H   V++     +V V  ++LD+YSK+  V  A ++F  M + + V++NVMI CYA
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N +  ++   F+++  +  +  Q    T ++++     L+ GR IH   +    +  + 
Sbjct: 310 RNGRVTDAFLCFQKM--SEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFLPHMV 366

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +  +L+DMY +CG+ + A+ IF  ++  + + W ++I+AYVQ G    AL LF E+  ++
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T ASIL A AE  SLS G+++H+++++S + SN    ++L+ MYA  G L+DA 
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR 486

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  +  +++VSWN++I A A +G  + ++  F +M+ S   P+  +  S+L+ACS  G
Sbjct: 487 KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           +++EG +YF SM ++Y + P  EHY  M+D++ R+G F  A++ + +MPF P   +W S+
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +N+ R HK++  A+ AA+Q+FKME   +   YV + N+YA AG+WE V+++K  M  +G+
Sbjct: 607 LNASRNHKDITIAEFAAEQIFKMEH-DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED- 670
            + ++ S VE K K HVFT  D  H  TN+I   ++ + + + +E         L  E  
Sbjct: 666 SRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETL 725

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            + +  S + HS RLA  F LI+T  G  + V  N R C  CH  ++  S++T REI V 
Sbjct: 726 VKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVG 785

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           DS  FHHF +G CSC ++W
Sbjct: 786 DSKIFHHFSNGRCSCGNYW 804


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/680 (36%), Positives = 399/680 (58%), Gaps = 10/680 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A+LL  C   D   E+ ++HA I     +    + N LVD+Y K   L  A+  F  + 
Sbjct: 38  YASLLWQCRGLD---EVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             ++ S+N L+  +A+ G    A  LF  M   G +P+  T + AL A     ++ALGR+
Sbjct: 95  LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           ++  +       +  V ++L+ +Y +   + EA + F   PE D V +  MI+ YA N +
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR 214

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI-VTTAISEVKVAN 314
              +L+L R +           + +LL   A+ +DL+ G   H +   +    S   VA 
Sbjct: 215 TSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAG 274

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +LV++Y KCGR ++A+ +   +   ++V WTAMI+AY Q GN  EA+NLF  M       
Sbjct: 275 TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEP 334

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQT 433
              T  S++ + A L +LSLGK++H+ +  S  F  ++   +A++ MY K G+L+ A + 
Sbjct: 335 SDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREV 394

Query: 434 FKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHC 490
           F+ +P   R++V+W A+I A AQNG  +  ++ F++M +  G +P+ V+ LSVL ACSH 
Sbjct: 395 FECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHL 454

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP-FEPDEIMWS 549
           G +E+  ++F SM   + + P  +HY  +VD+L R+G   EAEKL+ +   FE D + W 
Sbjct: 455 GQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWI 514

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           + +++C+++ +LE +++AA ++ ++E   + A  V +SN+YA  G+   V++++  M+  
Sbjct: 515 AFLSACQMNGDLERSQRAAKRVSELEP-ENVAGRVLLSNVYAAKGRRADVARIRNEMKSS 573

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           GV+K    SW+E+ ++VH F  +D  HP+  EI  ++E L +E+K+ GY PDT   L D 
Sbjct: 574 GVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDV 633

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           DEE KV+ L YHSERLA+A  +I+TP G+ + V+KNLR C+DCHAA K IS+I GR+I V
Sbjct: 634 DEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIV 693

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD+SRFHHFKDG CSC D+W
Sbjct: 694 RDTSRFHHFKDGVCSCGDYW 713



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 229/497 (46%), Gaps = 23/497 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++NT   N+L+  Y K G+L  A+  F  +    A SW IL+  Y+Q    R A  LF  
Sbjct: 64  DRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHW 123

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDT------ANELIQVHADIIKFGYNSILIICNSLVD 116
           M +  G  P+ VT +T L  C+           NELI   A  I     S      SL+ 
Sbjct: 124 MCSQ-GVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES------SLIT 176

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y + R ++ A R F   P+KD V + A+I+ +A       A++L   M   G K    T
Sbjct: 177 MYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPT 236

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEM 235
           + + L A     D+  G   H           +  VA  L++LY K   V +AR++   M
Sbjct: 237 YVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAM 296

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           P    VS+  MI  YA N    E++ LF+ +     + S     +++   A    L +G+
Sbjct: 297 PVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGK 356

Query: 296 QIHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYV 352
           +IH +   + + S+ + + N+++ MY KCG  E A+E+F    L   S V WTAMI AY 
Sbjct: 357 RIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYA 416

Query: 353 QKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSN 410
           Q G  EEA+ LF EM        ++ TF S+L A + L  L    +   S     G    
Sbjct: 417 QNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPA 476

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDM 468
                 L+D+  ++G L +A +        E ++V W A +SAC  NGD + + ++ + +
Sbjct: 477 GDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRV 536

Query: 469 VQSGYQPDSVSLLSVLS 485
             S  +P++V+   +LS
Sbjct: 537 --SELEPENVAGRVLLS 551



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +   +TV    L++ Y K G +  AR + ++M  RT+VSWT +I  Y+Q     EA  LF
Sbjct: 265 LDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLF 324

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNSILIICNSLVDSYC 119
             M  + G++P  +T  +++  C+   T +   ++HA I     ++  L++ N+++  Y 
Sbjct: 325 QCMDLE-GAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYG 383

Query: 120 KIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFT 176
           K   L+LAR VF+ +P   +  V++ A+I  +A+ G+ EEAI+LF EM    G +P+  T
Sbjct: 384 KCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVT 443

Query: 177 FAAALSA 183
           F + L A
Sbjct: 444 FLSVLCA 450


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/660 (35%), Positives = 375/660 (56%), Gaps = 1/660 (0%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           N+L  +HA +++   +    + N ++         + ++ VF ++ + +   +N +I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
             +   ++AI L+  M+  GF P++FT    L A     D+ LG ++H+ +VK  +  +V
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV  +LL LY K D   +A K+F ++P+ + VS+  +IT Y  +  ++E++  F++L   
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F    +L+  A   D   G  I      +     V VA SL+DMY KCG  E A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF+ +     V W+ MI  Y   G  ++AL+LF +M   N+  D  T   +L A A L
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            +L LG    S + R+ F+SN   G+AL+DMY+K GS+  A + F  M +++ V WNA++
Sbjct: 330 GALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMM 389

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              + NG A+A    F  + + G +PD  + + +L  C+H G + EG Q+FN+M + + L
Sbjct: 390 VGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSL 449

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P  EHY  MVD+L R+G  +EA +L+  MP +P+ ++W +++  C++HK+   A++   
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLK 509

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +L ++E   ++  YV +SNIY+   +WE   +++  M+E+ ++K+ A SW+E+   VH F
Sbjct: 510 KLIELEPW-NSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D+ H  + +I  K++ L +E+K  G+ P T   L D +EE K   L YHSE+LA+AF
Sbjct: 569 LVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAF 628

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            LI +P    I V+KNLR C DCH AIKLISKIT REI +RD++RFH F DG CSCRD+W
Sbjct: 629 GLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 224/470 (47%), Gaps = 3/470 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+    N+++   +  G+   ++ +F+ + +     W  +I G   K+ F +A  L+  
Sbjct: 45  DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  GG  P+  T   +L  C+        +++H+ ++K GY+  + +  SL+  Y K  
Sbjct: 105 MR-GGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             D A +VF ++P K+ VS+ A+ITG+   G   EAI  F ++  +G KP  F+    L+
Sbjct: 164 NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L D   G  +  ++  +    NVFVA +LLD+Y K   +  A  +F  MPE D VS
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MI  YA+N   +++L LF ++Q        +    +LS  A    L +G    +   
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +S   +  +L+DMY+KCG   +A EIF  +     V W AM+      G+ +   +
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFS 403

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF  + +  I  D+ TF  +L        ++ G+Q  + + R      ++     ++D+ 
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLL 463

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            ++G L +A Q    MP + N V W AL+  C  + D     +  + +++
Sbjct: 464 GRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/660 (35%), Positives = 374/660 (56%), Gaps = 1/660 (0%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           N+L  +HA +++   +    + N ++         + ++ VF ++ + +   +N +I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
             +   ++AI L+  M+  GF P++FT    L A     D+ LG ++H+ +VK  +  +V
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV  +LL LY K D   +A K+F ++P+ + VS+  +IT Y  +  ++E++  F++L   
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F    +L+  A   D   G  I      +     V VA SL+DMY KCG  E A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF+ +     V W+ MI  Y   G  ++AL+LF +M   N+  D  T   +L A A L
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            +L LG    S + R+ F+SN   G+AL+DMY+K GS+  A + F  M  ++ V WNA++
Sbjct: 330 GALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMM 389

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              + NG A+A    F  + + G +PD  + + +L  C+H G + EG Q+FN+M + + L
Sbjct: 390 VGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSL 449

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P  EHY  MVD+L R+G  +EA +L+  MP +P+ ++W +++  C++HK+   A++   
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLK 509

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +L ++E   ++  YV +SNIY+   +WE   +++  M+E+ ++K+ A SW+E+   VH F
Sbjct: 510 KLIELEPW-NSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D+ H  + +I  K++ L +E+K  G+ P T   L D +EE K   L YHSE+LA+AF
Sbjct: 569 LVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAF 628

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            LI +P    I V+KNLR C DCH AIKLISKIT REI +RD++RFH F DG CSCRD+W
Sbjct: 629 GLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 224/470 (47%), Gaps = 3/470 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+    N+++   +  G+   ++ +F+ + +     W  +I G   K+ F +A  L+  
Sbjct: 45  DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  GG  P+  T   +L  C+        +++H+ ++K GY+  + +  SL+  Y K  
Sbjct: 105 MR-GGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD 163

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             D A +VF ++P K+ VS+ A+ITG+   G   EAI  F ++  +G KP  F+    L+
Sbjct: 164 NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L D   G  +  ++  +    NVFVA +LLD+Y K   +  A  +F  MPE D VS
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MI  YA+N   +++L LF ++Q        +    +LS  A    L +G    +   
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +S   +  +L+DMY+KCG   +A EIF  +     V W AM+      G+ +   +
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFS 403

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF  + +  I  D+ TF  +L        ++ G+Q  + + R      ++     ++D+ 
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLL 463

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            ++G L +A Q    MP + N V W AL+  C  + D     +  + +++
Sbjct: 464 GRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/620 (38%), Positives = 365/620 (58%), Gaps = 23/620 (3%)

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSD------FTFAAALSAGVGLADIALGRQVHAFVVKT 203
           A +G    AI LF+ M+     P+        +   AL +   L   ALG  +HA  +++
Sbjct: 30  ASQGDFHHAIALFLRMR--ASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRS 87

Query: 204 NFVENVFVANALLDLYSK------HD-------CVVEA-RKLFGEMPEVDGVSYNVMITC 249
               + F ANALL+LY K      H         V+E+ RK+F EMPE D VS+N ++  
Sbjct: 88  GAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLG 147

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A + ++ E+L L RE+         F  S++L + A   D++ G ++H          +
Sbjct: 148 CAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDD 207

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V +SL+DMYA C R + + ++F NL     + W +M++   Q G+++EAL LF  M  
Sbjct: 208 VFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLH 267

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           + I     TF+S++ A   LASL LGKQLH++VIR GF  NVF  S+L+DMY K G++  
Sbjct: 268 SGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSI 327

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F  +   +IVSW A+I   A +G A+  L  F+ M     +P+ ++ L+VL+ACSH
Sbjct: 328 ARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSH 387

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+++G +YFNSM+  Y + P  EH+A++ D L R G  +EA   ++ M  +P   +WS
Sbjct: 388 AGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWS 447

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +C++HKN   A++ A ++F +E  R    ++ +SN Y+ +G+W   + ++K+MR++
Sbjct: 448 TLLRACKVHKNTVLAEEVAKKIFDLEP-RSMGSHIILSNTYSSSGRWNEAAHLRKSMRKK 506

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K  A SW+E+K+K HVF A+D+ HP    I   +    ++M ++GY P+T     D 
Sbjct: 507 GMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDI 566

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K   L  HSE+LAI F +I+TP G+ I VMKNLR C DCH   K ISKI GREI +
Sbjct: 567 EEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVM 626

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD++RFHHFKDG CSC DFW
Sbjct: 627 RDANRFHHFKDGICSCGDFW 646



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 202/436 (46%), Gaps = 25/436 (5%)

Query: 39  SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL------LSGCSEPDTANEL 92
           SW   I   + +  F  A  LF+ MR    SDP     + L      L  C+        
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRA---SDPAAACSSVLTSLPGALKSCAALGLRALG 77

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRC--------------LDLARRVFKEMPQKD 138
             +HA  ++ G  +     N+L++ YCK+                L+  R+VF EMP+KD
Sbjct: 78  ASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKD 137

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N L+ G A+ G + EA+ L  EM   G KP  FT ++ L      AD+  G ++H 
Sbjct: 138 VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG 197

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F  +  F ++VFV ++L+D+Y+       + K+F  +P  D + +N M+   A N    E
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDE 257

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L LFR +  +        FS+L+    N   L +G+Q+H   I       V +++SL+D
Sbjct: 258 ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLID 317

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY KCG    A+ IF  +     V WTAMI  +   G   EAL LF  M   N+  +  T
Sbjct: 318 MYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHIT 377

Query: 379 FASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F ++L A +    +  G K  +S     G + ++   +AL D   + G L++A      M
Sbjct: 378 FLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGM 437

Query: 438 PERNIVS-WNALISAC 452
             +   S W+ L+ AC
Sbjct: 438 KIKPTASVWSTLLRAC 453



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 173/331 (52%), Gaps = 3/331 (0%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L + R++F+ M ++  VSW  L+ G ++  +  EA  L  +M  D G  PD  T +++L 
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRD-GCKPDSFTLSSVLP 181

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             +E       +++H    + G++  + + +SL+D Y      D + +VF  +P +D++ 
Sbjct: 182 IFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAIL 241

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N+++ G A+ G  +EA+ LF  M H G KP   TF++ + A   LA + LG+Q+HA+V+
Sbjct: 242 WNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVI 301

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           +  F  NVF++++L+D+Y K   V  AR++F  +   D VS+  MI  +A +   +E+L 
Sbjct: 302 RGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMY 320
           LF  ++      +   F  +L+  ++   +  G +  ++ +     +  ++   +L D  
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTL 421

Query: 321 AKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
            + G+ EEA    + +    T   W+ ++ A
Sbjct: 422 GRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   ++ LI  Y K GN++ AR +F+ +     VSWT +I G++     REA  LF  
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M   G   P+++TF  +L+ CS           HA ++  G+       NS+ D Y  + 
Sbjct: 366 MEL-GNLKPNHITFLAVLTACS-----------HAGLVDKGWKYF----NSMSDHYGIVP 409

Query: 123 CLD 125
            L+
Sbjct: 410 SLE 412


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/754 (35%), Positives = 403/754 (53%), Gaps = 74/754 (9%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V+ N  I+  V++GN+  AR  F++M  RT  S+  LI GY + +    A  LF  M +
Sbjct: 17  VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76

Query: 66  DGGSDPDYVTFATLLSGCSE-----PDTANEL--IQVHADIIKFGYNSILIICNSLVDSY 118
                 D  ++  L++G S      PD A  L  I +   ++ F          SL+  Y
Sbjct: 77  R-----DLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSF---------TSLLRGY 122

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            +   L  A R+F +MP+++ V++  L+ GF   G   EA KLF EM             
Sbjct: 123 VRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPD----------- 171

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
                                       ++V    A+L  Y +   + EAR LF EMP+ 
Sbjct: 172 ----------------------------KDVVARTAMLSGYCQAGRITEARALFDEMPKR 203

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + VS+  MI+ YA N +   + KLF  +     DR++  ++ +L        +Q G  + 
Sbjct: 204 NVVSWTAMISGYAQNGKVILARKLFEVMP----DRNEVSWTAMLVGY-----IQAG-HVE 253

Query: 299 TQTIVTTAISEVKVA--NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
               +  A+ +  VA  N+++  + + G  + AK +F  +       W+AMI  Y Q   
Sbjct: 254 DAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEF 313

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           L EAL+ F EM    I  +  +F SIL   A LA+   G++LH+ ++R  F ++VF+ SA
Sbjct: 314 LMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSA 373

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY K G+L  A + F     +++V WN++I+  AQ+G  +  L  F+D+  +   PD
Sbjct: 374 LITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPD 433

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ + VL+ACS+ G ++EG + FNSM     +R    HY+ MVD+L R+G  DEA  L+
Sbjct: 434 GITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLI 493

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP EPD I+W +++ +CR+HKN E A+ AA +L ++E    A PYV +S+IY   G+W
Sbjct: 494 NNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEP-GSAGPYVLLSHIYTSTGRW 552

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKK 655
           E  S ++K +  R + K    SW+E    VH+FT+ D L HP+   I   +E L   + +
Sbjct: 553 EDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLME 612

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY  D S  LHD DEE K +SL+YHSER A+A+ L+  P G PI VMKNLR C DCH+A
Sbjct: 613 SGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSA 672

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IKLI+KIT REI +RD++RFHHFKDG CSCRD+W
Sbjct: 673 IKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 225/489 (46%), Gaps = 42/489 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYS-QKNQFREAFKL 59
           MP + T S N LI+GY ++     A  LF+ M  R   S+  LI G S +++   +A   
Sbjct: 43  MPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAA 102

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
              +       P  V+F +LL G        + I++   + +  + +  ++    +D+  
Sbjct: 103 LASIPL----PPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDA-- 156

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               ++ AR++F EMP KD V+  A+++G+ + G   EA  LF EM     K +  ++ A
Sbjct: 157 --GRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMP----KRNVVSWTA 210

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFV------------------ENVFVA--------- 212
            +S       + L R++   +   N V                  E++F A         
Sbjct: 211 MISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAAC 270

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           NA++  + +H  V  A+ +F  M   D  +++ MI  Y  NE   E+L  FRE+      
Sbjct: 271 NAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIR 330

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            +   F ++L+V A       GR++H   +  +  ++V   ++L+ MY KCG  ++AK +
Sbjct: 331 PNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRV 390

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F        V W +MI+ Y Q G  EEAL +F ++  A ++ D  T+  +L A +    +
Sbjct: 391 FNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKV 450

Query: 393 SLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
             G+++ +S  + S         S ++D+  ++G + +A+     MP E + + W AL+ 
Sbjct: 451 KEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMG 510

Query: 451 ACAQNGDAQ 459
           AC  + +A+
Sbjct: 511 ACRMHKNAE 519



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 17/365 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ V+   ++SGY ++G +  AR LF+ M  R  VSWT +I GY+Q  +   A KLF
Sbjct: 169 MPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLF 228

Query: 61  VDMRTDGGSDPDYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M      D + V++  +L G       + A +L     D         +  CN+++  
Sbjct: 229 EVM-----PDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPD-------HPVAACNAMMVG 276

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           + +   +D A+ +F+ M  +D  +++A+I  + +     EA+  F EM   G +P+  +F
Sbjct: 277 FGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSF 336

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + L+    LA    GR++HA +++ +F  +VF  +AL+ +Y K   + +A+++F     
Sbjct: 337 ISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEP 396

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V +N MIT YA +   +E+L +F +L+  R       +  +L+  +    ++ GR+I
Sbjct: 397 KDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREI 456

Query: 298 HTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
                + ++I       S +VD+  + G  +EA ++  N+      + W A++ A     
Sbjct: 457 FNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHK 516

Query: 356 NLEEA 360
           N E A
Sbjct: 517 NAEIA 521


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/726 (33%), Positives = 386/726 (53%), Gaps = 71/726 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q HA I+K G  +   I   L+ SY    C + A  V + +P     SF++LI    K  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  ++I +F  M   G  P              L+   +G+Q+H     +    + FV  
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------------------- 251
           ++  +Y +   + +ARK+F  M + D V+ + ++  YA                      
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 252 ----WNE---------QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
               WN           +KE++ +F+++    F   Q   S++L  V +   L +GR IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCG----------RFE--------------------- 327
              I    + +  V ++++DMY K G          +FE                     
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335

Query: 328 ---EAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              E  E+F   +  ++ V WT++I+   Q G   EAL LF EM  A +  +  T  S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A   +A+L  G+  H F +R   + NV  GSAL+DMYAK G +  +   F  MP +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WN+L++  + +G A+  +  FE ++++  +PD +S  S+LSAC   GL +EG +YF  M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           +++Y ++P+ EHY+ MV++L R+G   EA  L+ +MPFEPD  +W +++NSCR+  N++ 
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
           A+ AA++LF +E   +   YV +SNIYA  G W  V  ++  M   G++K    SW+++K
Sbjct: 576 AEIAAEKLFHLEP-ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
           ++V+   A D+ HPQ ++I  K++ + +EM+K G++P+   ALHD +E+ + + L  HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+ F L+NTP+G+P+ V+KNLR C DCHA IK IS   GREI +RD++RFHHFKDG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 744 SCRDFW 749
           SC DFW
Sbjct: 755 SCGDFW 760



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 220/514 (42%), Gaps = 75/514 (14%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y        A  +  S+ D T  S++ LI   ++   F ++  +F  M + G   P
Sbjct: 56  LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIP 114

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D      L   C+E        Q+H      G +    +  S+   Y +   +  AR+VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174

Query: 132 KEMPQKDS-----------------------------------VSFNALITGFAKEGLNE 156
             M  KD                                    VS+N +++GF + G ++
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANAL 215
           EA+ +F ++ HLGF P   T ++ L + VG ++ + +GR +H +V+K   +++  V +A+
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPS-VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293

Query: 216 LDLYSKH----------------------------------DCVVEARKLFGEMP-EVDG 240
           +D+Y K                                   D  +E  +LF E   E++ 
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  +I   A N +  E+L+LFRE+Q      +     ++L    N   L  GR  H  
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +    +  V V ++L+DMYAKCGR   ++ +F  +   + V W ++++ +   G  +E 
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLD 419
           +++F  + R  +  D  +F S+L A  ++     G K         G    +   S +++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +  ++G L++A    KEMP E +   W AL+++C
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 181/406 (44%), Gaps = 52/406 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M +++ V+ + L+  Y + G L     + + M    ++   VSW  ++ G+++    +EA
Sbjct: 177 MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +F  +   G   PD VT +++L    + +  N    +H  +IK G      + ++++D
Sbjct: 237 VVMFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295

Query: 117 SY-----------------------CKIRCLDLAR-----------RVFKEMPQK-DSVS 141
            Y                       C      L+R            +FKE   + + VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           + ++I G A+ G + EA++LF EMQ  G KP+  T  + L A   +A +  GR  H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           + + ++NV V +AL+D+Y+K   +  ++ +F  MP  + V +N ++  ++ + + KE + 
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL----- 316
           +F  L  TR       F++LLS        Q+G              E  +   L     
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACG-----QVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530

Query: 317 -VDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
            V++  + G+ +EA ++   +     +  W A++++   + N++ A
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/714 (33%), Positives = 389/714 (54%), Gaps = 41/714 (5%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--AR 128
           P      +LL  C   ++ ++L QVH   IK G N+  ++ N ++   C     D   AR
Sbjct: 16  PPTHPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 72

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           R+F E+P+ +   +N +I G+++    +  + L++EM   G KP  +TF           
Sbjct: 73  RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT--R 130

Query: 189 DIAL--GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           DIAL  GRQ+H  V+K     NVFV  AL+ +Y     +  AR +F   P+ D +++N++
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y    +++ES +LF  ++  +   +      +LS  +   DL+ G+++H+       
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIF------------------ANLSHIST------- 341
            S + + N+++DMYA CG  + A  IF                   NL  I         
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 310

Query: 342 ------VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
                 V WTAMI  Y++    +EAL LF  M   N+  D+ T  S+L A A L +L LG
Sbjct: 311 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 370

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           + + +++ R+   +++F  +AL+DMY K G +  A   F+EM +R+  +W A+I   A N
Sbjct: 371 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  F +M+++   PD ++ + VLSAC+H GL+++G +YF  MT ++ + P   H
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  +VD+L R+G   EA +++  MP + + I+W +++  CR+++  + A+    Q+ ++E
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              + A YV + NIYA   +W  + ++++ M ++G++K    S +E+  +VH F A D  
Sbjct: 551 P-DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRS 609

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HPQT  I  K++ + Q++K  GY PD S    D  EE K  S+  HSE+LAIAF LIN+P
Sbjct: 610 HPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSP 669

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G  I + KNLR C DCH   KL+SK+  RE+ VRD +RFHHFK G CSC+D+W
Sbjct: 670 PGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 250/526 (47%), Gaps = 53/526 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN V T      Y   G+   AR LF+ + +     W  +I GYS+ +  +    L+++M
Sbjct: 53  QNRVMTFCCTHEY---GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM 109

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PD  TF  L  G +         Q+H  ++K G    + +  +LV  Y     
Sbjct: 110 -LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 168

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD AR VF   P+ D +++N +I+ + K G  EE+ +LF+ M+     P+  T    LSA
Sbjct: 169 LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSA 228

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC------------------- 224
              L D+  G++VH++V       N+ + NA++D+Y+  DC                   
Sbjct: 229 CSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA--DCGEMDSALGIFRSMNNRDII 286

Query: 225 --------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                         +  AR  F +MPE D VS+  MI  Y  + ++KE+L+LFR +Q T 
Sbjct: 287 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 346

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               +F   ++L+  A+   L++G  I T        +++ V N+L+DMY KCG  ++A+
Sbjct: 347 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAE 406

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            IF  +S      WTAMI      G+ E+AL++F  M +A+I  D+ T+  +L A     
Sbjct: 407 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 466

Query: 391 SLSLGKQLH-SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G++       + G   N+     L+D+ A++G LK+A +  + MP + N + W AL
Sbjct: 467 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 526

Query: 449 ISAC---AQNGDAQATLKSFEDMVQSGYQPDS----VSLLSVLSAC 487
           ++ C    ++  A+  +K   ++     +PD+    V L ++ +AC
Sbjct: 527 LAGCRVYRESDMAEMVVKQILEL-----EPDNGAVYVLLCNIYAAC 567



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 45/488 (9%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDR----TAVSWTILIGGYSQKNQFREAF 57
           P  + ++ NM+IS Y K G    +R LF  M D+    T V+  +++   S+    R   
Sbjct: 180 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 239

Query: 58  KLFVDMRTDGGSDPDYV---TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           K+   ++ +   + + V       + + C E D+A         I +   N  +I   ++
Sbjct: 240 KVHSYVK-NCKVESNLVLENAMIDMYADCGEMDSA-------LGIFRSMNNRDIISWTTI 291

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           V  +  +  +D+AR  F +MP+KD VS+ A+I G+ +    +EA++LF  MQ    KP +
Sbjct: 292 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 351

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT  + L+A   L  + LG  +  ++ +     ++FV NAL+D+Y K   V +A  +F E
Sbjct: 352 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 411

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           M + D  ++  MI   A N   +++L +F  +        +  +  +LS   +   +  G
Sbjct: 412 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 471

Query: 295 RQIHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA- 350
           R+   +      I E  +A+   LVD+ A+ GR +EA E+  N+    +++ W A+++  
Sbjct: 472 RKYFLRMTSQHGI-EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGC 530

Query: 351 --YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
             Y +    E  +   +E+   N  A      +I  A      L   ++L   ++  G  
Sbjct: 531 RVYRESDMAEMVVKQILELEPDN-GAVYVLLCNIYAACKRWNDL---RELRQMMMDKGIK 586

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
                G +L++M   +G + + +   +  P+              +N DA+   K  +D+
Sbjct: 587 KT--PGCSLIEM---NGRVHEFVAGDRSHPQ-------------TKNIDAKLD-KMTQDL 627

Query: 469 VQSGYQPD 476
             +GY PD
Sbjct: 628 KLAGYSPD 635



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N++ +S   ++SG+   G +  AR  F+ M ++  VSWT +I GY + N+F+EA +LF
Sbjct: 280 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 339

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
            +M+      PD  T  ++L+ C+        E I+ + D  K   +  L + N+L+D Y
Sbjct: 340 RNMQAT-NVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND--LFVRNALIDMY 396

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +D A  +F+EM Q+D  ++ A+I G A  G  E+A+ +F  M      P + T+ 
Sbjct: 397 FKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYI 456

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
             LSA      +  GR+    +   + +E N+     L+DL ++   + EA ++   MP
Sbjct: 457 GVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 515


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/597 (38%), Positives = 368/597 (61%), Gaps = 3/597 (0%)

Query: 155  NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            N +  +  +EM   G +     + + L+  +    I  G++VHA ++KT +   V++   
Sbjct: 458  NRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTR 517

Query: 215  LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
            L+ LY+K  C+ +AR++  EMPE + VS+  MI+ Y+      E+L LF E+  +    +
Sbjct: 518  LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 577

Query: 275  QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            +F F+T+L+   +    Q+GRQIH+  I T+  S + V +SL+DMYAK G+  EA+ +F 
Sbjct: 578  EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFD 637

Query: 335  NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
             L     V  TA+IS Y Q G  EEAL+LF  + R  + ++  T+AS+L A + LA+L  
Sbjct: 638  GLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDH 697

Query: 395  GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            G+Q+HS V+R+     V   ++L+DMY+K GSL  + + F  MPER ++SWNA++   ++
Sbjct: 698  GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK 757

Query: 455  NGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT-QKYKLRPK 512
            +G  +  ++ F+ M +    +PDSV+ L+VLS CSH G+ + GL+ F  M  QK    P+
Sbjct: 758  HGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPE 817

Query: 513  KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
             EHY  +VD+  R+G  +EA + + +MPFEP   +W S++ +CR+H+N+   +  A +L 
Sbjct: 818  IEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL 877

Query: 573  KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            ++E   +A  YV +SN+YA AG+W+ V  V++ M+E+ V K    SW+EL   +H F A+
Sbjct: 878  EIES-ENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHAS 936

Query: 633  DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
            D  HP+  E+  K+  L  ++K+ GY P+ SC L+D D+E K + L+ HSE+LA+AF LI
Sbjct: 937  DRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLI 996

Query: 693  NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             TP G+P+ ++KNLR C DCH   K +S++ GRE+++RD +RFHH   G CSC D+W
Sbjct: 997  CTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 216/389 (55%), Gaps = 4/389 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G + ++  + ++L+ C       E  +VHA +IK  Y   + +   L+  Y K RCL  A
Sbjct: 472 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 531

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RRV  EMP+++ VS+ A+I+G+++ G   EA+ LFVEM   G  P++FTFA  L++    
Sbjct: 532 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 591

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           +   LGRQ+H+ V+KT+F  ++FV ++LLD+Y+K   + EAR++F  +PE D VS   +I
Sbjct: 592 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 651

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+L LFR LQ      +   ++++L+ ++    L  GRQ+H+  +     
Sbjct: 652 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 711

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V + NSL+DMY+KCG    ++ IF ++   + + W AM+  Y + G   EA+ LF  M
Sbjct: 712 FYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLM 771

Query: 368 CRAN-ISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNVFSGSALLDMYAKS 424
              N +  D  TF ++L   +       G ++   ++  + GF   +     ++D++ ++
Sbjct: 772 KEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRA 831

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G +++A +  K+MP E     W +L+ AC
Sbjct: 832 GRVEEAFEFIKKMPFEPTAAIWGSLLGAC 860



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 190/343 (55%), Gaps = 5/343 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   L  AR + + M +R  VSWT +I GYSQ+    EA  LFV+M    G+ P
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS-GTAP 576

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFAT+L+ C+         Q+H+ +IK  + S + + +SL+D Y K   +  ARRVF
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +P++D VS  A+I+G+A+ GL+EEA+ LF  +Q  G + +  T+A+ L+A  GLA + 
Sbjct: 637 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GRQVH+ V++      V + N+L+D+YSK   +  +R++F  MPE   +S+N M+  Y+
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756

Query: 252 WNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
            +   +E+++LF+ + +  +       F  +LS  ++      G +I  + +      E 
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 311 KVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           ++ +   +VD++ + GR EEA E    +    T   W +++ A
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 859



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 35/239 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++ VS   +ISGY + G    A +LF  +                Q+   R      
Sbjct: 639 LPERDVVSCTAIISGYAQLGLDEEALDLFRRL----------------QREGMRS----- 677

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                      +YVT+A++L+  S     +   QVH+ +++      +++ NSL+D Y K
Sbjct: 678 -----------NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAA 179
              L  +RR+F  MP++  +S+NA++ G++K GL  EA++LF  M+     KP   TF A
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 786

Query: 180 ALS--AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            LS  +  G+ D  L         K  F   +     ++DL+ +   V EA +   +MP
Sbjct: 787 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/726 (33%), Positives = 387/726 (53%), Gaps = 71/726 (9%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q HA I+K G  +   I   L+ SY    C + A  + + +P     SF++LI    K  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           L  ++I +F  M   G  P              L+    G+Q+H     +    + FV  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------------------- 251
           +L  +Y +   + +ARK+F  M E D V+ + ++  YA                      
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 252 ----WNE---------QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
               WN           +KE++ +F+++    F   Q   S++L  V +  +L +GRQIH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGR-------FEE----------------------- 328
              I    + +  V ++++DMY K G        F+E                       
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335

Query: 329 -AKEIFANLSH----ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
            A E+F         ++ V WT++I+   Q G   EAL LF EM  A +  ++ T  S+L
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A   +A+L  G+  H F +R   + +V  GSAL+DMYAK G +K +   F  MP +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLV 455

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WN+L++  + +G A+  +  FE ++++  +PD +S  S+LSAC   GL +EG +YFN M
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           +++Y ++P+ EHY+ MV++L R+G   EA  L+ ++PFEPD  +W +++NSCR+  N++ 
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDL 575

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
           A+ AA +LF +E   +   YV MSNIYA  G W  V  ++  M   G++K    SW+++K
Sbjct: 576 AEIAAQKLFHLEP-ENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
           +KV+   A D+ HPQ ++I  K++ + +EM+K G++P+   AL D +E+ + + L  HSE
Sbjct: 635 NKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSE 694

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           +LA+ F L+NTP+G+P+ V+KNLR C DCHA IK IS   GREI +RD++RFHHFKDG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754

Query: 744 SCRDFW 749
           SC DFW
Sbjct: 755 SCGDFW 760



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 52/406 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M  ++ V+ + L+ GY + G L     + + M    ++   VSW  ++ G+++    +EA
Sbjct: 177 MSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEA 236

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +F  M   G   PD VT +++L    + +  N   Q+H  +IK G      + ++++D
Sbjct: 237 VIMFQKMHHLGFC-PDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295

Query: 117 SYCK-------IRCLD----------------LARR-----------VFKEMPQK-DSVS 141
            Y K       I+  D                L+R            +FKE   + + VS
Sbjct: 296 MYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVS 355

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           + ++I G A+ G + EA++LF EMQ  G KP+  T  + L A   +A +  GR  H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAV 415

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           + + +++V V +AL+D+Y+K   +  ++ +F  MP  + V +N ++  Y+ + + KE + 
Sbjct: 416 RVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMS 475

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL----- 316
           +F  L  TR       F++LLS        Q+G              E  +   L     
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACG-----QVGLTDEGWKYFNMMSEEYGIKPRLEHYSC 530

Query: 317 -VDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
            V++  + G+ +EA ++   +     +  W A++++   + N++ A
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLA 576


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/655 (36%), Positives = 384/655 (58%), Gaps = 36/655 (5%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VHA +++     ++   N+L+  Y K   L LAR+VF  MP ++ VS N L++G+A  G 
Sbjct: 38  VHARVVRAARFDVVQY-NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGR 96

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           + +A+ L   ++   F  +++  ++A++A   +    +GRQ H + +K    E+ +V +A
Sbjct: 97  HRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSA 153

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           +L +Y +   + EA K                     +++++ E  +        R    
Sbjct: 154 VLHMYCQCAHMDEAVK---------------------YSKKHGEKCRAMGSCVICR---- 188

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
                 +L   A+  ++ +G Q+HTQ +       V V ++LVDMY KC    EA  +F 
Sbjct: 189 ------VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFE 242

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            L   + V WTA+++AY Q    E+AL LF++M    +  ++ T+A  L + A LA+L  
Sbjct: 243 VLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKN 302

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  L +  +++G    +   +AL++MY+KSGS++DA + F  MP R++VSWN++I   A 
Sbjct: 303 GNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAH 362

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G A+  +++F DM+ +   P  V+ + VLSAC+  GL++EG  Y N M ++  ++P KE
Sbjct: 363 HGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKE 422

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  MV +LCR G  DEAE+ +       D + W S+++SC++++N     + A+Q+F++
Sbjct: 423 HYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQL 482

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
            K +D   YV +SN+YA A +W+ V +V++ MRE GVRK    SW+++ S+VHVFT+ D+
Sbjct: 483 -KPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDK 541

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP   +I +K++ L+ ++K  GY P+ + ALHD ++E K E L YHSE+LA+AF LI T
Sbjct: 542 KHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRT 601

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P+G  I +MKN+R C DCH AIKLIS  TGR I VRD+ RFH  +DG CSC D+W
Sbjct: 602 PKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 211/451 (46%), Gaps = 39/451 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N LI+ YVK G L  AR++F++M  R  VS  +L+ GY+   + R+A  L   +R
Sbjct: 49  DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LR 105

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                  +YV  ++ ++  +   + +   Q H   IK G      +C++++  YC+   +
Sbjct: 106 VADFGLNEYV-LSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM 164

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A +  K                  K G    A+   V  + LG   S           
Sbjct: 165 DEAVKYSK------------------KHGEKCRAMGSCVICRVLGHCAST---------- 196

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++ LG QVH   +K     NV+V +AL+D+Y K D   EA ++F  +PE + VS+ 
Sbjct: 197 ---KEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 253

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++T Y  NE ++++L+LF +++      ++F ++  L+  A    L+ G  +   T+ T
Sbjct: 254 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 313

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + V N+L++MY+K G  E+A+ +F ++     V W ++I  Y   G   EA+  F
Sbjct: 314 GHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAF 373

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M  A       TF  +L A A+L  +  G    + +++  G        + ++ +  +
Sbjct: 374 HDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCR 433

Query: 424 SGSLKDAIQTFKE--MPERNIVSWNALISAC 452
            G L +A + F E      ++V+W +L+S+C
Sbjct: 434 VGRLDEA-ERFIESNCIGTDVVAWRSLLSSC 463



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 197/431 (45%), Gaps = 48/431 (11%)

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +++LG+ VHA VV+    + V   N L+ LY K   +  AR++F  MP  + VS N+++
Sbjct: 30  GELSLGKAVHARVVRAARFD-VVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLM 88

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA + +++++L L R      F  +++  S+ ++  A+     +GRQ H   I     
Sbjct: 89  SGYASSGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLA 145

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
               V ++++ MY +C   +EA +                   Y +K           E 
Sbjct: 146 EHPYVCSAVLHMYCQCAHMDEAVK-------------------YSKKHG---------EK 177

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           CRA  S        +L   A    + LG Q+H+  ++     NV+ GSAL+DMY K    
Sbjct: 178 CRAMGS---CVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP 234

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            +A + F+ +PE+NIVSW A+++A  QN   +  L+ F DM   G +P+  +    L++C
Sbjct: 235 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 294

Query: 488 SHCGLIEEG--LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           +    ++ G  L      T  + L P      +++++  +SG  ++A ++   MP   D 
Sbjct: 295 AGLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSMPCR-DV 350

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ---- 601
           + W+S+I     H     A++A +    M    +   YV    + +   Q   V +    
Sbjct: 351 VSWNSIIIGYAHHGR---AREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYY 407

Query: 602 VKKAMRERGVR 612
           +   M+E GV+
Sbjct: 408 LNIMMKEVGVK 418



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 186/399 (46%), Gaps = 61/399 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELF-------NSMVDRTAVSWTILIGGYSQKNQF 53
           MP++N VS N+L+SGY  SG    A  L        N  V  +AV+ T  +  Y    Q 
Sbjct: 76  MPSRNPVSGNLLMSGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQC 135

Query: 54  RE-AFKLFVDMRTDGGSDPDYVTFATL--LSGCSEPDTA--------------------- 89
              A K        G ++  YV  A L     C+  D A                     
Sbjct: 136 HGYAIKA-------GLAEHPYVCSAVLHMYCQCAHMDEAVKYSKKHGEKCRAMGSCVICR 188

Query: 90  --------NELI---QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
                    E++   QVH   +K      + + ++LVD Y K      A RVF+ +P+K+
Sbjct: 189 VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKN 248

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+ A++T + +  L E+A++LF++M+  G +P++FT+A AL++  GLA +  G  + A
Sbjct: 249 IVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGA 308

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
             +KT     + V NAL+++YSK   V +AR++F  MP  D VS+N +I  YA + + +E
Sbjct: 309 CTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRARE 368

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA----- 313
           +++ F ++ F     S   F  +LS  A     Q+G        +   + EV V      
Sbjct: 369 AMEAFHDMLFAEEVPSYVTFIGVLSACA-----QLGLVDEGFYYLNIMMKEVGVKPGKEH 423

Query: 314 -NSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
              +V +  + GR +EA+  I +N      V W +++S+
Sbjct: 424 YTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSS 462



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 15/194 (7%)

Query: 368 CRANISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           C   +S DQ   A  +  +A     LSLGK +H+ V+R+    +V   + L+ +Y K G 
Sbjct: 7   CPMGVSVDQRRAAVAVLRAAAAAGELSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGR 65

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSV 483
           L  A Q F  MP RN VS N L+S  A +G   DA A L+  +      +  +   L S 
Sbjct: 66  LGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLRVAD------FGLNEYVLSSA 119

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           ++A +H    + G Q  +    K  L       ++++ + C+    DEA K  ++   E 
Sbjct: 120 VAATAHVRSYDMGRQ-CHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKY-SKKHGEK 177

Query: 544 DEIMWSSVINSCRI 557
              M S VI  CR+
Sbjct: 178 CRAMGSCVI--CRV 189


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 415/763 (54%), Gaps = 30/763 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +    +++ Y K G+L +A  +F+ ++ R A  W  +I       Q  EA +LF  MR
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMR 232

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             GG  P+  T    L+ C      +E +++HA   +   ++  ++  +LV+ Y K   +
Sbjct: 233 L-GGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKV 291

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A  +F+ + ++D VS+NA++T  A  G +++A K F EM  +G  PS  T+ A L+A 
Sbjct: 292 DDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNAC 351

Query: 185 VGLADIALGRQVHAFVVKTNFVE--------NVFVANALLDLYSK---------HDCVVE 227
              A +      H   VKT  VE        +V +  A++++YS+            ++E
Sbjct: 352 FLAAHLK-----HGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLE 406

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
             +   + P +  + +N +++ Y  NEQ++E+  +FR +             T+ +   +
Sbjct: 407 QDR---DQPSI--MMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGS 461

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L+ G+ IH+    +    +  V N+LV MYA+ G  E+A+EIF  ++  + + WTAM
Sbjct: 462 SASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAM 521

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           +  + Q G   EAL +F  +    ++ ++ TF ++L A   LAS+   K + + +  +GF
Sbjct: 522 VGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGF 581

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
             NV   + LL    K GSL++    F+ M  +N VSWN  I+A AQ+G+    ++ F+ 
Sbjct: 582 FGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQT 641

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M   G    SV+L+ VLS+CSH GL+ +G  YF +M   Y    + EHY+ ++D+L R+G
Sbjct: 642 MQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAG 701

Query: 528 CFDEAEKLMAQMPFEPDEIM-WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
             + AE+ + ++PF    +  W +++  C++H +LE   +A  ++  +       PY+ M
Sbjct: 702 WLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNP-GSTGPYLVM 760

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            N+YA AG+W   + V+K+M E G +K    SW+E+K ++H F   D  HP+++EI R++
Sbjct: 761 HNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHREL 820

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           E L +EMK+ G+  D    ++D   + K   L  HSE+LAIAF LI+T  G P+ +MKNL
Sbjct: 821 ERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNL 880

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C+DCH+A K IS + GREI VRD+ RFHHF+ G CSC DFW
Sbjct: 881 RVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 268/557 (48%), Gaps = 14/557 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G+   AR +F  + D++ V+WT LIG  ++    +EAF LF +M+   G  P
Sbjct: 81  LLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQ-GVMP 139

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLARRV 130
           + VT+  +L  C  P    E+  + A +   G   + +I+  +++++Y K   LD A  V
Sbjct: 140 NDVTYVAVLGACGHP---WEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGV 196

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +  +D+  +NA+I+        +EA++LF +M+  G  P+  T  AAL+A     D 
Sbjct: 197 FDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDF 256

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +   ++HAF  +     +  V  AL+++Y K   V +A ++F  + E D VS+N M+T  
Sbjct: 257 SEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTAN 316

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE- 309
           A N  + ++ K FRE+       S+  +  +L+       L+ G  + T  +      E 
Sbjct: 317 ACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES 376

Query: 310 --VKVANSLVDMYAKC----GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
             V +  ++++MY++C      F  +  +  +    S + W  ++S YV+    EEA  +
Sbjct: 377 VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTI 436

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  M    ++ D  +  ++  A    ASL  GK +HS +  S         +AL+ MYA+
Sbjct: 437 FRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYAR 496

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            GSL+DA + F  M  RN++SW A++   +Q G  +  L+ F  ++  G  P+ V+  +V
Sbjct: 497 LGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAV 556

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L+AC +   I    +   +   +       E    ++  L + G  +E       M  + 
Sbjct: 557 LNACGNLASIPAA-KLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK- 614

Query: 544 DEIMWSSVINSCRIHKN 560
           +++ W++ I +   H N
Sbjct: 615 NQVSWNTAIAANAQHGN 631



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 254/547 (46%), Gaps = 20/547 (3%)

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           DG +D    TFA L+  C+      +  ++H  I++ G      +   L+  YCK    +
Sbjct: 35  DGSADAS--TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPE 92

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR VF+ +  K  V++ +LI   A+ G  +EA  LF EMQ  G  P+D T+ A L A  
Sbjct: 93  EARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACG 152

Query: 186 GLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              ++     + A V     +E +V VA A+++ Y K   +  A  +F  +   D   +N
Sbjct: 153 HPWEV---DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWN 209

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+    +EQ  E+L+LFR+++      ++      L+   +  D     +IH      
Sbjct: 210 AMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFAREL 269

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              ++  V  +LV+MY K G+ ++A+EIF  +     V W AM++A    G  ++A   F
Sbjct: 270 AGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCF 329

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF---MSNVFSGSALLDMY 421
            EM        + T+ +IL A    A L  G  + +  +  G      +V  G+A+++MY
Sbjct: 330 REMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY 389

Query: 422 AKSGSLKDAIQTF----KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           ++  S K A  +     ++  + +I+ WN ++S   +N   +     F  M+  G   D+
Sbjct: 390 SRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDT 449

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           VSL++V +AC     +E+G ++ +S+  + +L  K     ++V +  R G  ++A ++  
Sbjct: 450 VSLMTVFNACGSSASLEKG-KWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFD 508

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY-VAMSNIYAVAGQW 596
            M    + I W++++    +H  L   ++A  ++F+   L   AP  V  + +    G  
Sbjct: 509 AMTTR-NVISWTAMVG---VHSQLGLNREAL-RIFRSILLEGVAPNEVTFTAVLNACGNL 563

Query: 597 ESVSQVK 603
            S+   K
Sbjct: 564 ASIPAAK 570



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 34/330 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            + T   N L++ Y + G+L  ARE+F++M  R  +SWT ++G +SQ    REA ++F  
Sbjct: 481 TRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRS 540

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +G + P+ VTF  +L+ C    +      V A + + G+   + + N L+ +  K  
Sbjct: 541 ILLEGVA-PNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCG 599

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+     F+ M  K+ VS+N  I   A+ G     ++LF  MQ  G      T    LS
Sbjct: 600 SLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLS 659

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +    +   L  Q +++ +  + V+  F A A       + CV++               
Sbjct: 660 S---CSHAGLVAQGYSYFLNMH-VDYGFPAEA-----EHYSCVID--------------- 695

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              +++   W E  +E +K    L F   D+S FP+ TLL       DL+ G +  TQ I
Sbjct: 696 ---LLSRAGWLEHAEEFVK---RLPFG--DQSVFPWITLLCGCKLHGDLERGGRA-TQRI 746

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           +            + ++YA  G++ EA  +
Sbjct: 747 LGLNPGSTGPYLVMHNLYAGAGKWPEAAAV 776


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/714 (33%), Positives = 389/714 (54%), Gaps = 41/714 (5%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--AR 128
           P      +LL  C   ++ ++L QVH   IK G N+  ++ N ++   C     D   AR
Sbjct: 37  PPTHPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 93

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           R+F E+P+ +   +N +I G+++    +  + L++EM   G KP  +TF           
Sbjct: 94  RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT--R 151

Query: 189 DIAL--GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           DIAL  GRQ+H  V+K     NVFV  AL+ +Y     +  AR +F   P+ D +++N++
Sbjct: 152 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y    +++ES +LF  ++  +   +      +LS  +   DL+ G+++H+       
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIF------------------ANLSHIST------- 341
            S + + N+++DMYA CG  + A  IF                   NL  I         
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDK 331

Query: 342 ------VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
                 V WTAMI  Y++    +EAL LF  M   N+  D+ T  S+L A A L +L LG
Sbjct: 332 MPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG 391

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           + + +++ R+   +++F  +AL+DMY K G +  A   F+EM +R+  +W A+I   A N
Sbjct: 392 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +  L  F +M+++   PD ++ + VLSAC+H GL+++G +YF  MT ++ + P   H
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           Y  +VD+L R+G   EA +++  MP + + I+W +++  CR+++  + A+    Q+ ++E
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
              + A YV + NIYA   +W  + ++++ M ++G++K    S +E+  +VH F A D  
Sbjct: 572 P-DNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRS 630

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           HPQT  I  K++ + Q++K  GY PD S    D  EE K  S+  HSE+LAIAF LIN+P
Sbjct: 631 HPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSP 690

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G  I + KNLR C DCH   KL+SK+  RE+ VRD +RFHHFK G CSC+D+W
Sbjct: 691 PGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 250/526 (47%), Gaps = 53/526 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QN V T      Y   G+   AR LF+ + +     W  +I GYS+ +  +    L+++M
Sbjct: 74  QNRVMTFCCTHEY---GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM 130

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PD  TF  L  G +         Q+H  ++K G    + +  +LV  Y     
Sbjct: 131 -LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 189

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD AR VF   P+ D +++N +I+ + K G  EE+ +LF+ M+     P+  T    LSA
Sbjct: 190 LDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSA 249

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC------------------- 224
              L D+  G++VH++V       N+ + NA++D+Y+  DC                   
Sbjct: 250 CSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA--DCGEMDSALGIFRSMNNRDII 307

Query: 225 --------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                         +  AR  F +MPE D VS+  MI  Y  + ++KE+L+LFR +Q T 
Sbjct: 308 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 367

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               +F   ++L+  A+   L++G  I T        +++ V N+L+DMY KCG  ++A+
Sbjct: 368 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAE 427

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            IF  +S      WTAMI      G+ E+AL++F  M +A+I  D+ T+  +L A     
Sbjct: 428 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 487

Query: 391 SLSLGKQLH-SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +  G++       + G   N+     L+D+ A++G LK+A +  + MP + N + W AL
Sbjct: 488 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 547

Query: 449 ISAC---AQNGDAQATLKSFEDMVQSGYQPDS----VSLLSVLSAC 487
           ++ C    ++  A+  +K   ++     +PD+    V L ++ +AC
Sbjct: 548 LAGCRVYRESDMAEMVVKQILEL-----EPDNGAVYVLLCNIYAAC 588



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 45/488 (9%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDR----TAVSWTILIGGYSQKNQFREAF 57
           P  + ++ NM+IS Y K G    +R LF  M D+    T V+  +++   S+    R   
Sbjct: 201 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 260

Query: 58  KLFVDMRTDGGSDPDYV---TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           K+   ++ +   + + V       + + C E D+A         I +   N  +I   ++
Sbjct: 261 KVHSYVK-NCKVESNLVLENAMIDMYADCGEMDSA-------LGIFRSMNNRDIISWTTI 312

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           V  +  +  +D+AR  F +MP+KD VS+ A+I G+ +    +EA++LF  MQ    KP +
Sbjct: 313 VSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDE 372

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT  + L+A   L  + LG  +  ++ +     ++FV NAL+D+Y K   V +A  +F E
Sbjct: 373 FTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFRE 432

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           M + D  ++  MI   A N   +++L +F  +        +  +  +LS   +   +  G
Sbjct: 433 MSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKG 492

Query: 295 RQIHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA- 350
           R+   +      I E  +A+   LVD+ A+ GR +EA E+  N+    +++ W A+++  
Sbjct: 493 RKYFLRMTSQHGI-EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGC 551

Query: 351 --YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
             Y +    E  +   +E+   N  A      +I  A      L   ++L   ++  G  
Sbjct: 552 RVYRESDMAEMVVKQILELEPDN-GAVYVLLCNIYAACKRWNDL---RELRQMMMDKGIK 607

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
                G +L++M   +G + + +   +  P+              +N DA+   K  +D+
Sbjct: 608 KX--PGCSLIEM---NGRVHEFVAGDRSHPQ-------------TKNIDAKLD-KMTQDL 648

Query: 469 VQSGYQPD 476
             +GY PD
Sbjct: 649 KLAGYSPD 656



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N++ +S   ++SG+   G +  AR  F+ M ++  VSWT +I GY + N+F+EA +LF
Sbjct: 301 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 360

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
            +M+      PD  T  ++L+ C+        E I+ + D  K   +  L + N+L+D Y
Sbjct: 361 RNMQAT-NVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND--LFVRNALIDMY 417

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +D A  +F+EM Q+D  ++ A+I G A  G  E+A+ +F  M      P + T+ 
Sbjct: 418 FKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYI 477

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
             LSA      +  GR+    +   + +E N+     L+DL ++   + EA ++   MP
Sbjct: 478 GVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP 536


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 370/662 (55%), Gaps = 1/662 (0%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
           T N L Q+H  +I    +    + N L+      R    +  +F      +   +N+LI 
Sbjct: 25  TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           GF    L  E + LF+ ++  G     FTF   L A    +   LG  +H+ VVK  F  
Sbjct: 85  GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           +V    +LL +YS    + +A KLF E+P+   V++  + + Y  + +++E++ LF+++ 
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                   +    +LS   +  DL  G  I              V  +LV++YAKCG+ E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ +F ++     V W+ MI  Y      +E + LF++M + N+  DQ +    L + A
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            L +L LG+   S + R  F++N+F  +AL+DMYAK G++    + FKEM E++IV  NA
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
            IS  A+NG  + +   F    + G  PD  + L +L  C H GLI++GL++FN+++  Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            L+   EHY  MVD+  R+G  D+A +L+  MP  P+ I+W ++++ CR+ K+ + A+  
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
             +L  +E   +A  YV +SNIY+V G+W+  ++V+  M ++G++K+  YSW+EL+ KVH
Sbjct: 505 LKELIALEPW-NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F A+D+ HP +++I  K+E+L  EM+  G+ P T     D +EE K   L YHSE+LA+
Sbjct: 564 EFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAV 623

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           A  LI+T  G  I V+KNLR C DCH  +KLISKIT REI VRD++RFH F +G CSC D
Sbjct: 624 ALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683

Query: 748 FW 749
           +W
Sbjct: 684 YW 685



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 205/429 (47%), Gaps = 3/429 (0%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           LI G+   + F E   LF+ +R  G     + TF  +L  C+   +    I +H+ ++K 
Sbjct: 82  LINGFVNNHLFHETLDLFLSIRKHGLYLHGF-TFPLVLKACTRASSRKLGIDLHSLVVKC 140

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G+N  +    SL+  Y     L+ A ++F E+P +  V++ AL +G+   G + EAI LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            +M  +G KP  +     LSA V + D+  G  +  ++ +    +N FV   L++LY+K 
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             + +AR +F  M E D V+++ MI  YA N   KE ++LF ++        QF     L
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S  A+   L +G    +       ++ + +AN+L+DMYAKCG      E+F  +     V
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSF 401
              A IS   + G+++ +  +F +  +  IS D +TF  +L        +  G +  ++ 
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQA 460
                    V     ++D++ ++G L DA +   +MP R N + W AL+S C    D Q 
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500

Query: 461 TLKSFEDMV 469
                ++++
Sbjct: 501 AETVLKELI 509



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 7/352 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +  +   L+S Y  SG L  A +LF+ + DR+ V+WT L  GY+   + REA  LF  
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           M  + G  PD      +LS C       + E I  + + ++   NS   +  +LV+ Y K
Sbjct: 203 M-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS--FVRTTLVNLYAK 259

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR VF  M +KD V+++ +I G+A     +E I+LF++M     KP  F+    
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS+   L  + LG    + + +  F+ N+F+ANAL+D+Y+K   +    ++F EM E D 
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V  N  I+  A N   K S  +F + +          F  LL    +   +Q G +    
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439

Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
                A+   V+    +VD++ + G  ++A  +  ++    + + W A++S 
Sbjct: 440 ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/636 (36%), Positives = 369/636 (58%), Gaps = 7/636 (1%)

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K+   + AR V +  P ++ VS+ +LI+G A+ G    A+  F EM+  G  P+DFTF
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
             A  A   L     G+Q+HA  VK   + +VFV  +  D+Y K     +ARKLF E+PE
Sbjct: 62  PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 121

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD--RSQFPFSTLLSVVANKLDLQIGR 295
            +  ++N  I+    + + +E+++ F  ++F R D   +   F   L+  ++ L L +G 
Sbjct: 122 RNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   + +   ++V V N L+D Y KC +   ++ IF  +   + V W ++++AYVQ  
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             E+A  L++   +  +       +S+L A A +A L LG+ +H+  +++     +F GS
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY-- 473
           AL+DMY K G ++D+ Q F EMPE+N+V+ N+LI   A  G     L  FE+M   G   
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ ++ +S+LSACS  G +E G++ F+SM   Y + P  EHY+ +VD+L R+G  + A 
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
           + + +MP +P   +W ++ N+CR+H   +    AA+ LFK++  +D+  +V +SN +A A
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP-KDSGNHVLLSNTFAAA 478

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+W   + V++ ++  G++K   YSW+ +K++VH F A D  H    EI+  +  L  EM
Sbjct: 479 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 538

Query: 654 KKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCH 713
           +  GYKPD   +L+D +EE K   + +HSE+LA+AF L++ P   PI + KNLR C DCH
Sbjct: 539 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 598

Query: 714 AAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  K +S    REI VRD++RFH FKDG CSC+D+W
Sbjct: 599 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 224/459 (48%), Gaps = 5/459 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K  +  +AR +      R  VSWT LI G +Q   F  A   F +MR +G    D+ T
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF-T 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F       +         Q+HA  +K G    + +  S  D YCK R  D AR++F E+P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++  ++NA I+    +G   EAI+ F+E + +   P+  TF A L+A      + LG Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V+++ F  +V V N L+D Y K   +  +  +F EM   + VS+  ++  Y  N +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            +++  L+   +    + S F  S++LS  A    L++GR IH   +       + V ++
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI--S 373
           LVDMY KCG  E++++ F  +   + V   ++I  Y  +G ++ AL LF EM       +
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 374 ADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            +  TF S+L A +   ++  G K   S     G        S ++DM  ++G ++ A +
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 433 TFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ 470
             K+MP +  +S W AL +AC  +G  Q  L + E++ +
Sbjct: 421 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 459



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 193/400 (48%), Gaps = 20/400 (5%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK D    AR +    P  + VS+  +I+  A N  +  +L  F E++      + F 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F      VA+      G+QIH   +    I +V V  S  DMY K    ++A+++F  + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             +   W A IS  V  G   EA+  FIE  R +   +  TF + L A ++   L+LG Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG- 456
           LH  V+RSGF ++V   + L+D Y K   ++ +   F EM  +N VSW +L++A  QN  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 457 DAQAT---LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           D +A+   L+S +D+V++        + SVLSAC+    +E G +  ++   K  +    
Sbjct: 241 DEKASVLYLRSRKDIVET----SDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTI 295

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
              +++VD+  + GC +++E+   +MP E + +  +S+I        ++ A      LF+
Sbjct: 296 FVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMAL----ALFE 350

Query: 574 MEKLRDAAP------YVAMSNIYAVAGQWESVSQVKKAMR 607
               R   P      +V++ +  + AG  E+  ++  +MR
Sbjct: 351 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 390



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 30/219 (13%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG-GSD 70
           L+  Y K G +  + + F+ M ++  V+   LIGGY+ + Q   A  LF +M   G G  
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           P+Y+TF +LLS CS        +++   +   +G        + +VD   +   ++ A  
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 130 VFKEMPQKDSVS-FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF--------TFAAA 180
             K+MP + ++S + AL       G  +  + L          P D         TFAAA
Sbjct: 421 FIKKMPIQPTISVWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 478

Query: 181 -----------------LSAGVGLADIALGRQVHAFVVK 202
                            +  G G + I +  QVHAF  K
Sbjct: 479 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAK 517


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/604 (39%), Positives = 365/604 (60%), Gaps = 32/604 (5%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           F+  L A + L  ++LG+Q+H+ +  +    + F++N LL+LYSK   +  A  LF  MP
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 237 EVDGVSYNVMITCY----------------------AWN---------EQYKESLKLFRE 265
             + +S N+MI  Y                       WN         E  +E+L LF  
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +    F   ++   ++L   A+   L  G+Q+H   +       + V  SL  MY K G 
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             + + +   +   S V W  ++S   QKG  E  L+ +  M  A    D+ TF S++ +
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            +ELA L  GKQ+H+  +++G  S V   S+L+ MY++ G L+D+I+TF E  ER++V W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           +++I+A   +G  +  +K F +M Q     + ++ LS+L ACSHCGL ++GL  F+ M +
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           KY L+ + +HY  +VD+L RSGC +EAE ++  MP + D I+W +++++C+IHKN E A+
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIAR 491

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           + AD++ +++  +D+A YV ++NIY+ A +W++VS+V++AM+++ V+K    SWVE+K++
Sbjct: 492 RVADEVLRIDP-QDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQ 550

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F   DE HP+  EI + +E L  E+K++GY PDTS  LHD D E K + L++HSE+L
Sbjct: 551 VHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKL 610

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAFAL+NTPEG PI VMKNLR C+DCH AIK IS+I   EI VRDSSRFHHFK+G CSC
Sbjct: 611 AIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSC 670

Query: 746 RDFW 749
            D+W
Sbjct: 671 GDYW 674



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 200/374 (53%), Gaps = 3/374 (0%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           ++ CN ++ +Y  +  L+ A+ +F EMP ++  ++NA++TG  K  +NEEA+ LF  M  
Sbjct: 135 IMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNE 194

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           L F P +++  + L     L  +  G+QVHA+V+K  F  N+ V  +L  +Y K   + +
Sbjct: 195 LSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHD 254

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
             ++   MP+   V++N +++  A    ++  L  +  ++   F   +  F +++S  + 
Sbjct: 255 GERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSE 314

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L  G+QIH + +   A SEV V +SLV MY++CG  +++ + F        V W++M
Sbjct: 315 LAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSM 374

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-G 406
           I+AY   G  EEA+ LF EM + N+  ++ TF S+L A +       G  L   +++  G
Sbjct: 375 IAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYG 434

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSF 465
             + +   + L+D+  +SG L++A    + MP + + + W  L+SAC  + +A+   +  
Sbjct: 435 LKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVA 494

Query: 466 EDMVQSGYQPDSVS 479
           +++++   Q DS S
Sbjct: 495 DEVLRIDPQ-DSAS 507



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 189/381 (49%), Gaps = 4/381 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N +S N++I  Y+  GNL +A+ LF+ M DR   +W  ++ G ++     EA  LF
Sbjct: 130 MPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLF 189

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +    PD  +  ++L GC+         QVHA ++K G+   L++  SL   Y K
Sbjct: 190 SRM-NELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMK 248

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +    RV   MP    V++N L++G A++G  E  +  +  M+  GF+P   TF + 
Sbjct: 249 AGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSV 308

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G+Q+HA  VK      V V ++L+ +YS+  C+ ++ K F E  E D 
Sbjct: 309 ISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDV 368

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V ++ MI  Y ++ Q +E++KLF E++      ++  F +LL   ++      G  +   
Sbjct: 369 VLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDM 428

Query: 301 TIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            +    + + ++    LVD+  + G  EEA+ +  ++      + W  ++SA     N E
Sbjct: 429 MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAE 488

Query: 359 EALNLFIEMCRANISADQATF 379
            A  +  E+ R +   D A++
Sbjct: 489 IARRVADEVLRID-PQDSASY 508



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 85/297 (28%)

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           GRF +  E FA L                 KG++ EA   F+    + I A+   F+++L
Sbjct: 36  GRFSDGNEQFATL---------------CSKGHIREAFESFL----SEIWAEPRLFSNLL 76

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI------------ 431
           +A   L S+SLGKQLHS +  SG  S+ F  + LL++Y+K G L+ A+            
Sbjct: 77  QACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIM 136

Query: 432 -------------------QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
                                F EMP+RN+ +WNA+++   +    +  L  F  M +  
Sbjct: 137 SCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELS 196

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
           + PD  SL SVL  C+H G +  G Q  ++   K           S+  +  ++G   + 
Sbjct: 197 FMPDEYSLGSVLRGCAHLGALLAG-QQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDG 255

Query: 533 EKLMAQMP----------------------------------FEPDEIMWSSVINSC 555
           E+++  MP                                  F PD+I + SVI+SC
Sbjct: 256 ERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSC 312


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/529 (41%), Positives = 334/529 (63%), Gaps = 6/529 (1%)

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL----KLFRELQFTRFDRSQFPFST 280
           +  AR LF  MP  D  S++ +++ +  + Q + +L    ++ RE   +  D ++F  S+
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGAD-NEFTASS 167

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
            L+        + GR++H   +     ++  V ++L DMYAK GR ++A+ +F  +    
Sbjct: 168 ALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRD 227

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WTAM+  Y   G   E   LF+ M R+ I  ++ T+A +LRA AE  S  LGKQ+H 
Sbjct: 228 VVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHG 287

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            + +S    + F+GSAL+ MY+K G +  A++ F+ MP+ ++VSW A+IS  AQNG    
Sbjct: 288 RMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDE 347

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F+ ++ SG++PD V+ + VLSAC+H GL+++GL  F+S+  KY +    +HYA ++
Sbjct: 348 ALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVI 407

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG F+ AE ++  MP +P++ +W+S++  CRIHKN+  A  AA+ LF++E   + 
Sbjct: 408 DLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEP-ENP 466

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           A YV ++NIYA  G ++ V  +++ M  RG+ K+ A SW+E+ ++VHVF   D+ HPQ  
Sbjct: 467 ATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAE 526

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   ++ L  +M++EGY  DT   LHD ++E K + + YHSERLA+AF +I TP+GSPI
Sbjct: 527 EIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPI 586

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V KNLR C DCH  IKLISKI  REI VRDS+RFHHFK+G CSCRD+W
Sbjct: 587 KVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 40/437 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSG-NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           +P+ +  S N L++   +S   LA+AR LF+ M  R   SW+ ++  + +  Q R A  +
Sbjct: 87  LPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAI 146

Query: 60  FVDM-RTDGGSDPDY-VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
           +  M R  GGS  D   T ++ L+  +    A    ++H  +++ G ++  ++ ++L D 
Sbjct: 147 YRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADM 206

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           Y K   LD AR VF  MP +D VS+ A++  +   G + E  +LFV M   G  P++FT+
Sbjct: 207 YAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTY 266

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A  L A        LG+QVH  + K+   ++ F  +AL+ +YSK+  +  A ++F  MP+
Sbjct: 267 AGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPK 326

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D VS+  MI+ YA N Q  E+L  F  L  + F      F  +LS  A+   +  G  I
Sbjct: 327 PDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGI 386

Query: 298 HTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMIS 349
                    I       + ++D+ ++ G FE A+++      I+T+P       W +++ 
Sbjct: 387 FHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDM------INTMPVKPNKFLWASLLG 440

Query: 350 AYVQKGNLE------EAL------NLFIEMCRANISADQATFASI--LRASAELASLS-- 393
                 N+       EAL      N    +  ANI A    F  +  +R + EL  ++  
Sbjct: 441 GCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKM 500

Query: 394 -------LGKQLHSFVI 403
                  +G ++H F++
Sbjct: 501 PASSWIEVGTRVHVFLV 517



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 165/347 (47%), Gaps = 6/347 (1%)

Query: 112 NSLVDSYCK-IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLG 169
           N+LV +  +  R L  AR +F  MP++D  S++A+++   + G    A+ ++  M +  G
Sbjct: 96  NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPG 155

Query: 170 FKPSD--FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
              +D  FT ++AL+A         GR++H  VV+     +  V +AL D+Y+K   + +
Sbjct: 156 GSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDD 215

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR +F  MP  D VS+  M+  Y    +  E  +LF  +  +    ++F ++ +L   A 
Sbjct: 216 ARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAE 275

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
               ++G+Q+H +   +         ++LV MY+K G    A  +F  +     V WTAM
Sbjct: 276 FTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAM 335

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
           IS Y Q G  +EAL+ F  +  +    D  TF  +L A A    +  G  + HS   + G
Sbjct: 336 ISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYG 395

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
                   + ++D+ ++SG  + A      MP + N   W +L+  C
Sbjct: 396 IEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGC 442


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/560 (40%), Positives = 343/560 (61%), Gaps = 4/560 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H+ +    F       N L+ +Y+K  C+ EAR +F  + E   VS++ MI  YA 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 253 NEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI--SE 309
           + + +E+L LF  ++   R + +   F+ + +      DL+ GR+IH   + +  +  S 
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             + N+L++MY +CG  EEA+++F  + H     WT+MI+A  +   L EAL LF  M  
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             I     T AS+L A A   +L +GKQ+HS +  SGF S+V + +ALLDMYAK GSL+ 
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           + + F  M  RN VSW A+I+A AQ+G     L+ F++M   G   D+ + + VL ACSH
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GLI+E L++F+SM + Y + P + HY   +D + R+G   +AE+L+  MPF P+ + W 
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N+CRIH   E A K A+ L K+    D+  Y  + N+YA  G++    +V+K M +R
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAP-EDSMAYTLLGNVYAATGRYGDQMRVRKGMTDR 422

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++KV   S++E+K+KVH F A D  HP  +EI  ++E L   M++ GY P+T   LH  
Sbjct: 423 GLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAV 482

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K + +  HSE+LAIAF LI TP G+P+L++KNLR C+DCHAA K+I+KI  R I V
Sbjct: 483 NEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVV 542

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD+ RFHHF+DG CSC+D+W
Sbjct: 543 RDTHRFHHFEDGQCSCKDYW 562



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 193/378 (51%), Gaps = 5/378 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H+ +   G++   I  N LV  Y K  CLD AR +F  + ++  VS++A+I  +A  G
Sbjct: 6   RIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHG 65

Query: 154 LNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE--NVF 210
             +EA+ LF  M++ G  +P+  TF    +A   + D+  GR++HA  + +  ++  N  
Sbjct: 66  RGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAI 125

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NALL++Y +   + EARK+F  M   D  S+  MIT    N +  E+L+LF  +    
Sbjct: 126 LENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEG 185

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              +    +++L+  A    L++G+QIH++   +   S V    +L+DMYAKCG  E + 
Sbjct: 186 IPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSS 245

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  +   ++V WTAMI+A  Q G  +EAL LF EM    + AD  TF  +LRA +   
Sbjct: 246 KVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAG 305

Query: 391 SLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            +    +  HS V               LD   ++G L+DA +    MP     ++W  L
Sbjct: 306 LIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTL 365

Query: 449 ISACAQNGDAQATLKSFE 466
           ++AC  +  A+   K  E
Sbjct: 366 LNACRIHSQAERATKVAE 383



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 214/446 (47%), Gaps = 44/446 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++ T++ N L+S Y K G L  AR +FN +++RT VSW+ +IG Y+   + +EA  LF  
Sbjct: 17  HRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHR 76

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG--YNSILIICNSLVDSYCK 120
           MR DG  +P+ +TF  + + C   +   +  ++HA  +  G   +S  I+ N+L++ Y +
Sbjct: 77  MRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVR 136

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ AR+VF  M   D+ S+ ++IT   +     EA++LF  M   G  P+  T A+ 
Sbjct: 137 CGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASV 196

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A      + +G+Q+H+ +  + F  +V    ALLD+Y+K   +  + K+F  M   + 
Sbjct: 197 LNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNS 256

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+  MI   A + Q  E+L+LF+E+           F  +L   ++   ++   +    
Sbjct: 257 VSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHS 316

Query: 301 TIVTTAI--SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            +   AI  +E     +L D   + GR ++A+E+  ++  H  T+ W  +++A       
Sbjct: 317 MVEDYAIAPTETHYCRAL-DTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNA------- 368

Query: 358 EEALNLFIEMCRANISADQAT-FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
                     CR +  A++AT  A +L   A   S++                     + 
Sbjct: 369 ----------CRIHSQAERATKVAELLSKLAPEDSMAY--------------------TL 398

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNI 442
           L ++YA +G   D ++  K M +R +
Sbjct: 399 LGNVYAATGRYGDQMRVRKGMTDRGL 424



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 1/183 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + + N +  N L++ YV+ G+L  AR++F++M    A SWT +I   ++  +  EA +LF
Sbjct: 119 LKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELF 178

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  P  VT A++L+ C+         Q+H+ +   G++S ++   +L+D Y K
Sbjct: 179 HRMNLE-GIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAK 237

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ + +VF  M  ++SVS+ A+I   A+ G  +EA++LF EM   G      TF   
Sbjct: 238 CGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICV 297

Query: 181 LSA 183
           L A
Sbjct: 298 LRA 300



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 131/328 (39%), Gaps = 27/328 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + ++   L+  Y K G+L  + ++F +M  R +VSWT +I   +Q  Q  EA +LF +
Sbjct: 222 HSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKE 281

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKI 121
           M  + G   D  TF  +L  CS      E ++  H+ +  +            +D+  + 
Sbjct: 282 MNLE-GMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRA 340

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             L  A  +   MP   +++++  L+         E A K+   +  L   P D + A  
Sbjct: 341 GRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLA--PED-SMAYT 397

Query: 181 LSAGVGLADIALGRQVHAF----------VVKTNFVE-----NVFVANALLDLYSKHDCV 225
           L   V  A    G Q+             V   +F+E     + FVA       S+ + +
Sbjct: 398 LLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAH-PSRDEIL 456

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL-KLFRELQFTRFDRSQFPFSTLLSV 284
           +E  KL G M E  G   N     +A NE+ KE L  L  E     F     P  T L +
Sbjct: 457 LELEKLGGRMREA-GYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLI 515

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKV 312
           V N   L++    H  T V   I   ++
Sbjct: 516 VKN---LRVCSDCHAATKVIAKIMRRRI 540


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/743 (35%), Positives = 405/743 (54%), Gaps = 67/743 (9%)

Query: 13  ISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           IS Y + G++  AR++F++  +  RT  SW  ++  Y + ++ R+A  LF  M       
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM-----PQ 80

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
            + V+F  ++SG       N ++     +        ++   S+V  Y +   ++ A ++
Sbjct: 81  RNTVSFNGMISGY----VKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKL 136

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG---VGL 187
           F EMP+++ VS+  +I G  KE   ++A KLF +M        D      +  G   VG 
Sbjct: 137 FWEMPRRNVVSWTVMIGGLLKESRIDDAKKLF-DM----IPEKDVVVVTNMIGGYCQVGR 191

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D A  R++         V NVF    ++  Y+K+  V  ARKLF  MPE + VS+  M+
Sbjct: 192 LDEA--REL----FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAML 245

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y  + + KE+ +LF  +          P   +  V  N++ LQ G             
Sbjct: 246 MGYTQSGRMKEAFELFEAM----------PVKWI--VACNEMILQFGL------------ 281

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
                           G    A+ +F  +       W AMI  + +KG   EAL LF  M
Sbjct: 282 ---------------AGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARM 326

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            R  ++ +  +  S+L   A LASL  G+Q+H+ ++RS F  +++  S L+ MY K G L
Sbjct: 327 QREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDL 386

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F     +++V WN++I+  +Q+G  +  L  F DM  SG QPD V+ + VLSAC
Sbjct: 387 VRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSAC 446

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           S+ G ++EG + F +M   Y++ P  EHYA MVD+L R+G  DEA +L+ +MP EPD I+
Sbjct: 447 SYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIV 506

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CR H  L+ A+ A ++L K+E  ++A PYV +S++YA  G+W  V  ++K + 
Sbjct: 507 WGALLGACRNHMKLDLAEVAVEKLAKLEP-KNAGPYVLLSHMYATKGRWRDVEVLRKKIN 565

Query: 608 ERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
            R V K    SW+E++ KVH+FT  D + HP+ + I + +E L   +++ GY PD S  L
Sbjct: 566 RR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVL 624

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD DEE K  SL YHSERLA+A+ L+  PEG PI VMKNLR C DCH+AIKLI+K+TGRE
Sbjct: 625 HDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I +RD++RFHHFKDG CSC+DFW
Sbjct: 685 IILRDANRFHHFKDGSCSCKDFW 707



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 235/462 (50%), Gaps = 35/462 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NTVS N +ISGYVK+G +A AR++F+ M +R  VSWT ++ GY Q+    EA KLF
Sbjct: 78  MPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLF 137

Query: 61  VDMRTDGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
            +M        + V++  ++ G    S  D A +L     D+I       +++  +++  
Sbjct: 138 WEM-----PRRNVVSWTVMIGGLLKESRIDDAKKLF----DMIP---EKDVVVVTNMIGG 185

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YC++  LD AR +F EM  ++  ++  +++G+AK G  + A KLF  M     + ++ ++
Sbjct: 186 YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMP----ERNEVSW 241

Query: 178 AAALSAGVGLADIALGRQVHAF-VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            A L     +     GR   AF + +   V+ +   N ++  +     +  AR +F  M 
Sbjct: 242 TAML-----MGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMK 296

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E D  ++N MI  +       E+L LF  +Q      +     ++LSV A+   L  GRQ
Sbjct: 297 ERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQ 356

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H + + +    ++ VA+ L+ MY KCG    AK IF        V W +MI+ Y Q G 
Sbjct: 357 VHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGL 416

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH-----SFVIRSGFMSNV 411
            EEALN+F +MC + +  D+ TF  +L A +    +  G ++      ++ +  G    +
Sbjct: 417 GEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPG----I 472

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
              + ++D+  ++G + +A++  ++MP E + + W AL+ AC
Sbjct: 473 EHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGAC 514



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 59/297 (19%)

Query: 314 NSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            S +  Y + G    A+++F N  L   +   W AM+SAY +     +AL LF +M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQ-- 80

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
                                                 N  S + ++  Y K+G + DA 
Sbjct: 81  -------------------------------------RNTVSFNGMISGYVKNGMVADAR 103

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  MPERN+VSW +++    Q G  +   K F +M +     + VS   ++      G
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR----NVVSWTVMIG-----G 154

Query: 492 LIEEGLQYFNSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
           L++E     +   + + + P+K+     +M+   C+ G  DEA +L  +M    +   W+
Sbjct: 155 LLKE--SRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVR-NVFTWT 211

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           ++++    +  ++ A+K    LF++   R+   + AM   Y  +G+ +   ++ +AM
Sbjct: 212 TMVSGYAKNGRVDVARK----LFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/711 (35%), Positives = 408/711 (57%), Gaps = 21/711 (2%)

Query: 53  FREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN 112
           FREA     +     G+  +   +  +L  C +    ++  ++HA I+K G +    +  
Sbjct: 54  FREALSFIRE-----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMT 108

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP 172
            LV+ Y K   ++ AR+VF E+P+++ VS+  L+TG+  +   E A+++F EM   G  P
Sbjct: 109 FLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYP 168

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
           +++T   ALSA   L    LG+Q+H + +K     +  + N+L  LYSK   +  A K F
Sbjct: 169 TNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAF 228

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
             + + + +S+  +I+ +  N +    L+ F E+     + ++F  ++ LS+      L 
Sbjct: 229 RRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLD 288

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           IG QIH+ TI     S + + NS++ +Y KCG   EAK++F  +  IS V W AMI+ + 
Sbjct: 289 IGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHA 348

Query: 353 Q-----KGNL------EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           +     K +L       EAL++F+++ R+ +  D  TF+S+L   + L +L  G+Q+H+ 
Sbjct: 349 RMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQ 408

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            I++GF+S+V  G+AL++MY K GS++ A + F EM  R ++SW ++I+  AQNG  Q  
Sbjct: 409 TIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQA 468

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           L  FEDM  +G +P+ ++ + VLSACSH G+++E L YF  M  +YK+ P  +HYA ++D
Sbjct: 469 LLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLID 528

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +  R G  DEA   + +M  EP+E +WS +I  CR    LE    AA+QL  + K +D  
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNL-KPKDTE 587

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
            Y  + N+Y  AG+W+ VS+V+K M+E  + ++  +SW+ +K K++ F  N   H Q+ E
Sbjct: 588 TYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGE 647

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK----VESLKYHSERLAIAFALINTPEG 697
           +   + NL ++ K  GY+ + S  + DE+E+      + S+ YHSE+LAIAF L+NT   
Sbjct: 648 MYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNA 707

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
            PI V K++  C DCH  I++IS ++ REI +RDS R H F +G CSC DF
Sbjct: 708 VPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 239/471 (50%), Gaps = 14/471 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G + TAR++F+ +  R  VSWT L+ GY   ++   A ++F +M  + G+ P
Sbjct: 110 LVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREM-LEAGAYP 168

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              T  T LS  S+  +     Q+H   IK+       I NSL   Y K   L+ A + F
Sbjct: 169 TNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAF 228

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + +  K+ +S+  +I+ +   G     ++ FVEM     +P++FT  +ALS    +  + 
Sbjct: 229 RRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLD 288

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G Q+H+  +K  F  N+ + N+++ LY K   + EA+KLF EM  +  V++N MI  +A
Sbjct: 289 IGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHA 348

Query: 252 WNEQY-----------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
               +            E+L +F +L  +      F FS++LSV ++ + L+ G Q+H Q
Sbjct: 349 RMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQ 408

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TI T  +S+V V  +LV+MY KCG  E A + F  +S  + + WT+MI+ Y Q G  ++A
Sbjct: 409 TIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQA 468

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLD 419
           L LF +M  A +  ++ TF  +L A +    +         +     ++ V    A L+D
Sbjct: 469 LLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLID 528

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           M+ + G L +A    KEM  E N   W+ LI+ C   G  +    + E ++
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLL 579



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 182/365 (49%), Gaps = 20/365 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L S Y K G+L  A + F  + D+  +SWT +I  +    +     + FV+M ++   
Sbjct: 209 NSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSE-CV 267

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+  T  + LS C    + +   Q+H+  IK G+ S L I NS++  Y K   +  A++
Sbjct: 268 EPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKK 327

Query: 130 VFKEMPQKDSVSFNALITG------FAKEGL-----NEEAIKLFVEMQHLGFKPSDFTFA 178
           +F EM     V++NA+I G      FAK+ L       EA+ +F+++   G KP  FTF+
Sbjct: 328 LFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFS 387

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + LS    L  +  G QVHA  +KT F+ +V V  AL+++Y+K   +  A K F EM   
Sbjct: 388 SVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIR 447

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--ANKLD--LQIG 294
             +S+  MIT YA N Q +++L LF +++      ++  F  +LS    A  +D  L   
Sbjct: 448 TLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYF 507

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
           + +  +  +T  +        L+DM+ + GR +EA +    +    +   W+ +I+    
Sbjct: 508 QMMKNEYKITPVMDHYAC---LIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRS 564

Query: 354 KGNLE 358
           +G LE
Sbjct: 565 QGKLE 569



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 7/173 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V    L++ Y K G++  A + F  M  RT +SWT +I GY+Q  Q ++A  LF DMR
Sbjct: 417 DVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMR 476

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN--SLVDSYCKIR 122
              G  P+ +TF  +LS CS     +E +  +  ++K  Y    ++ +   L+D + ++ 
Sbjct: 477 L-AGVRPNKITFVGVLSACSHAGMVDEALD-YFQMMKNEYKITPVMDHYACLIDMFVRLG 534

Query: 123 CLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
            LD A    KEM  + +   ++ LI G   +G  E  +  +   Q L  KP D
Sbjct: 535 RLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLE--LGFYAAEQLLNLKPKD 585


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/686 (34%), Positives = 401/686 (58%), Gaps = 14/686 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C + + A E   +H  I+K G++  L +   LV+ Y K   ++ A +VF  +P
Sbjct: 61  YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++  ++  L+TG+ +      A++LF++M   G  PS++T    L+A   L  I  G+Q
Sbjct: 121 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VHA+++K +   +  + N+L   YSK   +  A K F  + E D +S+  +I+    N Q
Sbjct: 181 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
              SL  F ++       +++  +++LS     L L +G QIH+ +I     S + + NS
Sbjct: 241 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 300

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE-----------ALNLF 364
           ++ +Y KCG   EA+++F  +  ++ V W AMI+ + +  +L E           AL +F
Sbjct: 301 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 360

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            ++ R+ +  D  TF+S+L   + L +L  G+Q+H  +I+SG +++V  G+AL+ MY K 
Sbjct: 361 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 420

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS+  A + F EMP R ++SW ++I+  A++G +Q  L+ FEDM   G +P+ V+ + VL
Sbjct: 421 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 480

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACSH GL +E L YF  M ++Y ++P  +H+A ++D+  R G  +EA  ++ +M FEP+
Sbjct: 481 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPN 540

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           E +WS +I  CR H   +    AA+QL K+ K +D   YV++ N++  AG+W+ VS+V+K
Sbjct: 541 ETIWSMLIAGCRSHGKSDLGFYAAEQLLKL-KPKDVETYVSLLNMHISAGRWKDVSKVRK 599

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP--DT 662
            M+E  V K+  +SW+ +K KV+ F  ND+ H Q+ E+ + +E ++ E+K  GY+P  D 
Sbjct: 600 LMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDV 659

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
                +E+EE  + S   HSE+LAIAF L+N P  +PI V+K++  C DCH  I+ IS +
Sbjct: 660 EVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLL 719

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDF 748
            GREI +RDS + H F +G+CSC  +
Sbjct: 720 KGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 248/479 (51%), Gaps = 28/479 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G + +A ++F+++  R   +WT L+ GY Q +    A +LF+ M  + G+ P
Sbjct: 99  LVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKM-LEAGAYP 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              T   +L+ CS   +     QVHA +IK+  +    I NSL   Y K R L+ A + F
Sbjct: 158 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF 217

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + +KD +S+ ++I+     G    ++  F++M   G KP+++T  + LSA   +  + 
Sbjct: 218 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 277

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LG Q+H+  +K  +  ++ + N+++ LY K   ++EA+KLF  M  ++ V++N MI  +A
Sbjct: 278 LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA 337

Query: 252 WNEQYKE-----------SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                 E           +L +F++L  +      F FS++LSV +N + L+ G QIH Q
Sbjct: 338 KMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQ 397

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +  +++V V  +LV MY KCG  ++A + F  +   + + WT+MI+ + + G  ++A
Sbjct: 398 IIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQA 457

Query: 361 LNLFIEMCRANISADQATFASILRA--SAELASLSL------GKQLHSFVIRSGFMSNVF 412
           L LF +M    I  +Q TF  +L A   A LA  +L       KQ +   +   F     
Sbjct: 458 LQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHF----- 512

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
             + L+DMY + G +++A     +M  E N   W+ LI+ C  +G +     + E +++
Sbjct: 513 --ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK 569



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 208/456 (45%), Gaps = 60/456 (13%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N L S Y K   L  A + F  + ++  +SWT +I       Q   +   F+DM 
Sbjct: 193 DTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDML 252

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           +D G  P+  T  ++LS C    T +   Q+H+  IK GY S ++I NS++  Y K   L
Sbjct: 253 SD-GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 311

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAK-EGLNEE----------AIKLFVEMQHLGFKPS 173
             A+++F+ M   + V++NA+I G AK   L E+          A+ +F ++   G KP 
Sbjct: 312 IEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPD 371

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
            FTF++ LS    L  +  G Q+H  ++K+  + +V V  AL+ +Y+K   + +A K F 
Sbjct: 372 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 431

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KL 289
           EMP    +S+  MIT +A +   +++L+LF +++      +Q  F  +LS  ++      
Sbjct: 432 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 491

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L     +  Q  +   +        L+DMY + GR EEA ++                 
Sbjct: 492 ALYYFELMQKQYNIKPVMDHFAC---LIDMYLRLGRVEEAFDV----------------- 531

Query: 350 AYVQKGNLEE---ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
             V K N E      ++ I  CR++  +D   +     A+ +L  L   K + ++V    
Sbjct: 532 --VHKMNFEPNETIWSMLIAGCRSHGKSDLGFY-----AAEQLLKLK-PKDVETYV---- 579

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                    +LL+M+  +G  KD  +  K M E  +
Sbjct: 580 ---------SLLNMHISAGRWKDVSKVRKLMKEEKV 606


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/676 (35%), Positives = 396/676 (58%), Gaps = 5/676 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           + +L++  +   +   L  +H  I+K G +      + L+D Y K   +  AR++F EMP
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +  V++N++I+     G  +EAI+L+  M   G  P  +TF+A   A   +     G++
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 196 VHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            H   V   F V + FVA  ++D+Y+K   + +AR +F  + + D V +  +I  Y    
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L++F ++  +R   +++  +++L    N  DL  G+ IH   + +   S V    
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQT 242

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY+KC   E++ ++F +L++ S V WT+ I   VQ G  E AL++F EM R +IS 
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISP 302

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  TF+SIL A + LA L  G+Q+H+  ++ G   N +  +AL+ +Y K G+++ A   F
Sbjct: 303 NHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVF 362

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + + E ++VS N +I A AQNG     L+ FE M + G++P+ V+ +S+L AC++ GL+E
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVE 422

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG Q F+ +   + +   ++HY  M+D+L R+  F+EA  L+ +    PD I W +++N+
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNA 481

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C+IH  +E A+K   ++   +  RD   ++ ++NIYA AG+W++V ++K A R+  ++K 
Sbjct: 482 CKIHGEVEMAEKFMKKMLD-QAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKT 540

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SWV++  +VH F A D  HP+ +EI   +  L++++   GY PDT   L D +EE K
Sbjct: 541 PAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKK 600

Query: 675 VESLKYHSERLAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           + +L YHSE+LAIAFAL  T  + + I + KNLR C DCH+ IK +S +TGR+I  RD+ 
Sbjct: 601 ISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAK 660

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK G CSC+D+W
Sbjct: 661 RFHHFKGGICSCKDYW 676



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 233/473 (49%), Gaps = 5/473 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI GY+K   +  AR+LF+ M +R  V+W  +I  +  + + +EA +L+ +M  + G  P
Sbjct: 41  LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE-GVLP 99

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDLARRV 130
           D  TF+ +    SE   + E  + H   +  G+  S   +   +VD Y K   +  AR V
Sbjct: 100 DAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFV 159

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +  KD V F ALI G+ + GL+ EA+++F +M     KP+++T A+ L +   L D+
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDL 219

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+ +H  VVK+     V    +LL +YSK + V ++ K+F  +     V++   I   
Sbjct: 220 VNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGL 279

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N + + +L +FRE+       + F FS++L   ++   L+ G QIH  T+        
Sbjct: 280 VQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK 339

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+ +Y KCG  E+A+ +F +L+ +  V    MI AY Q G   EAL LF  M + 
Sbjct: 340 YVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKL 399

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLK 428
               +  TF SIL A      +  G Q+ S +IR+     +     + ++D+  ++   +
Sbjct: 400 GHKPNVVTFISILLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFE 458

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +A    +E    +++ W  L++AC  +G+ +   K  + M+    +     +L
Sbjct: 459 EAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHIL 511



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L++ Y K   +  + ++FNS+   + V+WT  I G  Q  +   A  +F +M    
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS 299

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            S P++ TF+++L  CS         Q+HA  +K G +    +  +L+  Y K   ++ A
Sbjct: 300 IS-PNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKA 358

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF+ + + D VS N +I  +A+ G   EA++LF  M+ LG KP+  TF + L A    
Sbjct: 359 RSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNA 418

Query: 188 ADIALGRQVHAFVVKTNFVE 207
             +  G Q+ + +   + +E
Sbjct: 419 GLVEEGCQIFSLIRNNHSIE 438


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 375/663 (56%), Gaps = 6/663 (0%)

Query: 92  LIQVHADIIKFGYNSILIIC-NSLVDSYC-KIRCLDLARRVFKEMPQK--DSVSFNALIT 147
           L Q+HA +IK G  +    C +SL+++       L  A  +F+  P+    +  +N L+ 
Sbjct: 32  LPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91

Query: 148 GFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
                G  E+A+ LFVEM  +    P   T A AL +   +  + +GR + A+ VK   +
Sbjct: 92  ALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLM 151

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
            + FV ++L+ +Y+    V  A+ LF  + E   V +N +IT Y  N  + E +++F+ +
Sbjct: 152 ADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGM 211

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
                   +    ++++      D ++G+ +         +    +  +L+DMYAKCG  
Sbjct: 212 LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGEL 271

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
            +A+ +F  +     V W+AMIS Y Q     EAL LF EM  A +  +  T  S+L A 
Sbjct: 272 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSAC 331

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A L +L  GK +HS++ R      +  G+AL+D YAK G + DA++ F+ MP +N  +W 
Sbjct: 332 AVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWT 391

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           ALI   A NG  +  L+ F  M ++  +P  V+ + VL ACSH  L+EEG ++F+SMTQ 
Sbjct: 392 ALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQD 451

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           Y ++P+ EHY  +VD+L R+G  DEA + +  MP EP+ ++W ++++SC +HKN+E  ++
Sbjct: 452 YGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEE 511

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           A  Q+  +     +  Y+ +SNIYA  GQW++ + ++K M++RG+ K    S +EL   V
Sbjct: 512 ALKQIVSLNP-SHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVV 570

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
             F A D  HPQ  EI +K+E ++  +K  GY P+T+    + DE  K  S+ +HSE+LA
Sbjct: 571 VEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLA 630

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           IAF L+    G+ I + KNLR CTDCH+A KLISK+  REI VRD +RFHHFKDG CSC 
Sbjct: 631 IAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCN 690

Query: 747 DFW 749
           D+W
Sbjct: 691 DYW 693



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 224/483 (46%), Gaps = 25/483 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYS----------------------- 48
           L +  +KSG L  + + F+S+++  A S T+L    S                       
Sbjct: 35  LHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALL 94

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
                 +A  LFV+M       PD  T A  L  CS   T +    + A  +K G  +  
Sbjct: 95  HAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADR 154

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            + +SL+  Y   R +  A+ +F  + +   V +NA+IT + K G   E +++F  M  +
Sbjct: 155 FVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEV 214

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G    + T  + ++A   + D  LG+ V  +V +   V N  +  AL+D+Y+K   + +A
Sbjct: 215 GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKA 274

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R+LF  M   D V+++ MI+ Y   +Q +E+L LF E+Q    + +     ++LS  A  
Sbjct: 275 RRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVL 334

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L+ G+ +H+          + +  +LVD YAKCG  ++A E F ++   ++  WTA+I
Sbjct: 335 GALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALI 394

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGF 407
                 G   EAL LF  M +A+I     TF  +L A +    +  G++   S     G 
Sbjct: 395 KGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGI 454

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFE 466
                    ++D+  ++G + +A Q  + MP E N V W AL+S+CA + + +   ++ +
Sbjct: 455 KPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALK 514

Query: 467 DMV 469
            +V
Sbjct: 515 QIV 517


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/575 (39%), Positives = 360/575 (62%), Gaps = 3/575 (0%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + + L+  +    I  G++VHA ++KT +   V++   L+ LY+K  C+ +AR++  EMP
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E + VS+  MI+ Y+      E+L LF E+  +    ++F F+T+L+   +    Q+GRQ
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH+  I T+  S + V +SL+DMYAK G+  EA+ +F  L     V  TA+IS Y Q G 
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEAL+LF  + R  + ++  T+AS+L A + LA+L  G+Q+HS V+R+     V   ++
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQP 475
           L+DMY+K GSL  + + F  MPER ++SWNA++   +++G  +  ++ F+ M +    +P
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 312

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMT-QKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           DSV+ L+VLS CSH G+ + GL+ F  M  QK    P+ EHY  +VD+  R+G  +EA +
Sbjct: 313 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +MPFEP   +W S++ +CR+H+N+   +  A +L ++E   +A  YV +SN+YA AG
Sbjct: 373 FIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIES-ENAGNYVILSNLYASAG 431

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W+ V  V++ M+E+ V K    SW+EL   +H F A+D  HP+  E+  K+  L  ++K
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 491

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + GY P+ SC L+D D+E K + L+ HSE+LA+AF LI TP G+P+ ++KNLR C DCH 
Sbjct: 492 EAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHN 551

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             K +S++ GRE+++RD +RFHH   G CSC D+W
Sbjct: 552 FAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 216/389 (55%), Gaps = 4/389 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G + ++  + ++L+ C       E  +VHA +IK  Y   + +   L+  Y K RCL  A
Sbjct: 5   GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RRV  EMP+++ VS+ A+I+G+++ G   EA+ LFVEM   G  P++FTFA  L++    
Sbjct: 65  RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           +   LGRQ+H+ V+KT+F  ++FV ++LLD+Y+K   + EAR++F  +PE D VS   +I
Sbjct: 125 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+L LFR LQ      +   ++++L+ ++    L  GRQ+H+  +     
Sbjct: 185 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 244

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V + NSL+DMY+KCG    ++ IF ++   + + W AM+  Y + G   EA+ LF  M
Sbjct: 245 FYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLM 304

Query: 368 CRAN-ISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNVFSGSALLDMYAKS 424
              N +  D  TF ++L   +       G ++   ++  + GF   +     ++D++ ++
Sbjct: 305 KEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRA 364

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G +++A +  K+MP E     W +L+ AC
Sbjct: 365 GRVEEAFEFIKKMPFEPTAAIWGSLLGAC 393



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 190/343 (55%), Gaps = 5/343 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   L  AR + + M +R  VSWT +I GYSQ+    EA  LFV+M    G+ P
Sbjct: 51  LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMS-GTAP 109

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFAT+L+ C+         Q+H+ +IK  + S + + +SL+D Y K   +  ARRVF
Sbjct: 110 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 169

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +P++D VS  A+I+G+A+ GL+EEA+ LF  +Q  G + +  T+A+ L+A  GLA + 
Sbjct: 170 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 229

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GRQVH+ V++      V + N+L+D+YSK   +  +R++F  MPE   +S+N M+  Y+
Sbjct: 230 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 289

Query: 252 WNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
            +   +E+++LF+ + +  +       F  +LS  ++      G +I  + +      E 
Sbjct: 290 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 349

Query: 311 KVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           ++ +   +VD++ + GR EEA E    +    T   W +++ A
Sbjct: 350 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 392



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 35/239 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++ VS   +ISGY + G    A +LF  +                Q+   R      
Sbjct: 172 LPERDVVSCTAIISGYAQLGLDEEALDLFRRL----------------QREGMRS----- 210

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                      +YVT+A++L+  S     +   QVH+ +++      +++ NSL+D Y K
Sbjct: 211 -----------NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 259

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAA 179
              L  +RR+F  MP++  +S+NA++ G++K GL  EA++LF  M+     KP   TF A
Sbjct: 260 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 319

Query: 180 ALS--AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            LS  +  G+ D  L         K  F   +     ++DL+ +   V EA +   +MP
Sbjct: 320 VLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 378


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/638 (36%), Positives = 367/638 (57%), Gaps = 3/638 (0%)

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           ++ +Y +I  +   R+ F EMP  D VS+NALI  +      +     F  M   G  P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           +   +  LSA     +I +GR +   ++ T   E   V  AL+ +Y K     +A  +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            M   D V+++ M+  YA N   +E+L LFR++       ++    + L   A+  DL+ 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           G  +H +       S V V  +LV++Y KCGR E A E F  +   + V W+A+ +AY +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH--SFVIRSGFMSNV 411
                +A+ +   M    +  +  TF S+L A A +A+L  G+++H  + V+  G  S+V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           +  +AL++MY+K G+L  A   F ++   ++V WN+LI+  AQ+G  +  L+ FE M   
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G QP  ++  SVL ACSH G++++G ++F S    + + P+ EH+  MVD+L R+G   +
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           +E L+  MPFEP  + W + + +CR ++N++ A  AA+ LF+++  R  APYV +SN+YA
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDP-RKRAPYVLLSNMYA 479

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            AG+W  V+++++AM+     K    SW+E+K +VH F + D  HP+  EI  +++ L +
Sbjct: 480 KAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTK 539

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            MK+ GY PDT   LHD  +E+K   + YHSE+LA+AFAL+ TPEGSPI V+KNLR C D
Sbjct: 540 LMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCND 599

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH A K ISK+  REI VRD +RFH F++G CSC D+W
Sbjct: 600 CHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 7/464 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++S Y + GN+   R+ F+ M     VSW  LI  Y     F   +  F  M   G  +P
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQG-INP 59

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI-RCLDLARRV 130
             V  +  LS C++         +   I+  G     I+  +LV  Y K+  C D A  V
Sbjct: 60  GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAAS-V 118

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  M  +D V+++A++  +A+ G   EA+ LF +M   G  P+  T  + L A   L D+
Sbjct: 119 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 178

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G  +H  V        V V  AL++LY K   +  A + FG++ E + V+++ +   Y
Sbjct: 179 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--TQTIVTTAIS 308
           A N++ ++++++   +       +   F ++L   A    L+ GR+IH  TQ +     S
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  +LV+MY+KCG    A ++F  ++H+  V W ++I+   Q G  E+AL LF  M 
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMR 358

Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              +     TF S+L A +    L  G K   SF+   G          ++D+  ++G +
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418

Query: 428 KDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            D+      MP E + V+W A + AC    +    + + E++ Q
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQ 462



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 177/369 (47%), Gaps = 9/369 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           + ++    L+S Y K G+   A  +F  M  R  V+W+ ++  Y++    REA  LF  M
Sbjct: 94  EESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQM 153

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             DG + P+ VT  + L  C+          +H  +   G  S +++  +LV+ Y K   
Sbjct: 154 DLDGVA-PNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGR 212

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A   F ++ +K+ V+++A+   +A+   N +AI++   M   G  P+  TF + L A
Sbjct: 213 IEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDA 272

Query: 184 GVGLADIALGRQVH--AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
              +A +  GR++H    V+      +V+V  AL+++YSK   +  A  +F ++  +D V
Sbjct: 273 CAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLV 332

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            +N +I   A + Q +++L+LF  ++      +   F+++L   ++   L  GR+     
Sbjct: 333 LWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSF 392

Query: 302 IVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
           I    I  E +    +VD+  + G   +++++  ++      V W A + A     N++ 
Sbjct: 393 IGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDR 452

Query: 360 AL----NLF 364
           A+    NLF
Sbjct: 453 AIWAAENLF 461


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/705 (34%), Positives = 389/705 (55%), Gaps = 37/705 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC--LDLARRVFKEMP 135
           +LL  C    +  +L Q+H+  IK G +S  +    ++   C      +  AR+VF  +P
Sbjct: 12  SLLEKCK---SMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q     +N +I G+++    +  + +++ M     KP  FTF   L        +  G+ 
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +    VK  F  N+FV  A + ++S    V  ARK+F      + V++N+M++ Y   +Q
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           +K+S  LF E++      +      +LS  +   DL+ G+ I+           + + N 
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248

Query: 316 LVDMYAKCGRFEEAKEIF------------------ANLSHIST-------------VPW 344
           L+DM+A CG  +EA+ +F                  AN+  I               V W
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           TAMI  Y++     EAL LF EM  +N+  D+ T  SIL A A L +L LG+ + +++ +
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           +   ++ F G+AL+DMY K G++  A + FKEM  ++  +W A+I   A NG  +  L  
Sbjct: 369 NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAM 428

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M+++   PD ++ + VL AC+H G++E+G  +F SMT ++ ++P   HY  MVD+L 
Sbjct: 429 FSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLG 488

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G  +EA +++  MP +P+ I+W S++ +CR+HKN++ A+ AA Q+ ++E   + A YV
Sbjct: 489 RAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEP-ENGAVYV 547

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            + NIYA   +WE++ QV+K M ERG++K    S +EL   V+ F A D+ HPQ+ EI  
Sbjct: 548 LLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYA 607

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           K+EN+MQ++ K GY PDTS    D  EE K  +L  HSE+LAIA+ALI++  G  I ++K
Sbjct: 608 KLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVK 667

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH   KL+S+   RE+ VRD +RFHHF+ G CSC +FW
Sbjct: 668 NLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 248/509 (48%), Gaps = 44/509 (8%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           +SG +  AR++F+++   T   W  +I GYS+ N  +    +++ M       PD  TF 
Sbjct: 53  ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLAS-NIKPDRFTFP 111

Query: 78  TLLSGCSEPDTA--NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            LL G +        +++  HA  +K G++S L +  + +  +   R +DLAR+VF    
Sbjct: 112 FLLKGFTRNMALQYGKVLLNHA--VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGD 169

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             + V++N +++G+ +    +++  LF+EM+  G  P+  T    LSA   L D+  G+ 
Sbjct: 170 AWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKH 229

Query: 196 VHAFVVKTNFVENVFVANALLDLYS---------------KHDCVVE------------- 227
           ++ ++       N+ + N L+D+++               K+  V+              
Sbjct: 230 IYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQ 289

Query: 228 ---ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
              ARK F ++PE D VS+  MI  Y    ++ E+L LFRE+Q +     +F   ++L+ 
Sbjct: 290 IDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTA 349

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A+   L++G  + T     +  ++  V N+L+DMY KCG   +AK++F  + H     W
Sbjct: 350 CAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTW 409

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVI 403
           TAMI      G+ EEAL +F  M  A+I+ D+ T+  +L A      +  G+    S  +
Sbjct: 410 TAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTM 469

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATL 462
           + G   NV     ++D+  ++G L++A +    MP + N + W +L+ AC  + + Q   
Sbjct: 470 QHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAE 529

Query: 463 KSFEDMVQSGYQPDS----VSLLSVLSAC 487
            + + +++   +P++    V L ++ +AC
Sbjct: 530 MAAKQILE--LEPENGAVYVLLCNIYAAC 556



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 220/490 (44%), Gaps = 62/490 (12%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR++F+       V+W I++ GY++  QF+++  LF++M   G S P+ VT   +LS CS
Sbjct: 161 ARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVS-PNSVTLVLMLSACS 219

Query: 85  EPD----------------------TANELIQVHA---------DIIKFGYNSILIICNS 113
           +                          N LI + A          +     N  +I   S
Sbjct: 220 KLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTS 279

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           +V  +  I  +DLAR+ F ++P++D VS+ A+I G+ +     EA+ LF EMQ    KP 
Sbjct: 280 IVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPD 339

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           +FT  + L+A   L  + LG  V  ++ K +   + FV NAL+D+Y K   V +A+K+F 
Sbjct: 340 EFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFK 399

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
           EM   D  ++  MI   A N   +E+L +F  +        +  +  +L    +   ++ 
Sbjct: 400 EMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEK 459

Query: 294 GRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAY 351
           G+       +   I   V     +VD+  + GR EEA E+  N+    +++ W +++ A 
Sbjct: 460 GQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGAC 519

Query: 352 VQKGNL---EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
               N+   E A    +E+   N  A      +I  A     +L   +Q+   ++  G  
Sbjct: 520 RVHKNVQLAEMAAKQILELEPEN-GAVYVLLCNIYAACKRWENL---RQVRKLMMERGIK 575

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS-FED 467
                G +L+++   +G++ + +   +  P               Q+ +  A L++  +D
Sbjct: 576 KT--PGCSLMEL---NGNVYEFVAGDQSHP---------------QSKEIYAKLENMMQD 615

Query: 468 MVQSGYQPDS 477
           ++++GY PD+
Sbjct: 616 LIKAGYSPDT 625



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 166/376 (44%), Gaps = 50/376 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N++ +S   +++G+   G +  AR+ F+ + +R  VSWT +I GY + N+F EA  LF
Sbjct: 269 MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
            +M+      PD  T  ++L+ C+        E ++ + D  K    +   + N+L+D Y
Sbjct: 329 REMQMS-NVKPDEFTMVSILTACAHLGALELGEWVKTYID--KNSIKNDTFVGNALIDMY 385

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  A++VFKEM  KD  ++ A+I G A  G  EEA+ +F  M      P + T+ 
Sbjct: 386 FKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYI 445

Query: 179 AALSA---------------------GV-------GLADIALGR-----QVHAFVVKTNF 205
             L A                     G+       G     LGR     + H  +V    
Sbjct: 446 GVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPV 505

Query: 206 VENVFVANALLDLYSKHDCV----VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
             N  V  +LL     H  V    + A+++    PE +G  Y ++   YA  +++ E+L+
Sbjct: 506 KPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE-NGAVYVLLCNIYAACKRW-ENLR 563

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
             R+L   R  +   P  +L+ +  N  +   G Q H Q+    A    K+ N + D+  
Sbjct: 564 QVRKLMMERGIKKT-PGCSLMELNGNVYEFVAGDQSHPQSKEIYA----KLENMMQDL-I 617

Query: 322 KCGRFEEAKEIFANLS 337
           K G   +  E+F +L 
Sbjct: 618 KAGYSPDTSEVFLDLG 633


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/625 (38%), Positives = 364/625 (58%), Gaps = 22/625 (3%)

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDF--TFAAALSAGVGLADIALGRQVHAFVVKT 203
           I   A EG   +A+ LF+ M+      S    +  AAL +   L   ALG  +HA  +++
Sbjct: 20  IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79

Query: 204 NFVENVFVANALLDLYSKHDC---------VVEA----------RKLFGEMPEVDGVSYN 244
               + F ANALL+LY K  C         +V+           RK+F EM E D VS+N
Sbjct: 80  GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            ++   A   ++ E+L   R++    F    F  ST+L + A   D++ G ++H      
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRN 199

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S+V V +SL+DMYA C R + + ++F NL     + W ++++   Q G++EEAL +F
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M +A +     TF+S++     LASL  GKQLH++VI  GF  NVF  S+L+DMY K 
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  A   F +M   ++VSW A+I   A +G A+  L  FE M     +P+ ++ L+VL
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVL 379

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACSH GL+++G +YF SM+  Y + P  EH+A++ D L R+G  DEA   +++M  +P 
Sbjct: 380 TACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPT 439

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +WS+++ +CR+HKN   A++ A ++ ++E  R    +V +SN+Y+ +G+W   + +++
Sbjct: 440 ASVWSTLLRACRVHKNTMLAEEVAKKIMELEP-RSIGSHVVLSNMYSASGRWNEAAHLRE 498

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
           +MR++G++K  A SW+E+KSK+HVF A+D  HP  + I   +    ++M +EG+ P+T  
Sbjct: 499 SMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTED 558

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
              D +EE K   L  HSE+LAI F +I+TP G+ I VMKNLR C DCH   K ISK+  
Sbjct: 559 VFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLAD 618

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           REI VRD++RFHHFKDG CSC DFW
Sbjct: 619 REIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 196/435 (45%), Gaps = 22/435 (5%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDY-VTFATLLSGCSEPDTANELIQVHAD 98
           W   I   + +  F +A  LF+ MR           +    L  C+    +     +HA 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 99  IIKFGYNSILIICNSLVDSYCKIRC-------------------LDLARRVFKEMPQKDS 139
            I+ G  +     N+L++ YCK+ C                    +  R+VF EM ++D 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+N L+ G A+EG + EA+    +M   GF+P  FT +  L      AD+  G +VH F
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
             +  F  +VFV ++L+D+Y+       + K+F  +P  D + +N ++   A N   +E+
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L +FR +           FS+L+ V  N   L+ G+Q+H   I       V +++SL+DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KCG    A  IF  +S    V WTAMI  Y   G   EAL LF  M   N   +  TF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 380 ASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
            ++L A +    +  G K   S     G +  +   +AL D   ++G L +A     +M 
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 439 ERNIVS-WNALISAC 452
            +   S W+ L+ AC
Sbjct: 436 IKPTASVWSTLLRAC 450



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 198/424 (46%), Gaps = 45/424 (10%)

Query: 24  TARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC 83
           + R++F+ M++R  VSW  L+ G +++ +  EA   FV      G  PD  T +T+L   
Sbjct: 122 SVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALG-FVRKMCREGFRPDSFTLSTVLPIF 180

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           +E       ++VH    + G++S + + +SL+D Y      D + +VF  +P +D + +N
Sbjct: 181 AECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWN 240

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           +L+ G A+ G  EEA+ +F  M   G +P   TF++ +     LA +  G+Q+HA+V+  
Sbjct: 241 SLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICG 300

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            F +NVF++++L+D+Y K   +  A  +F +M   D VS+  MI  YA +   +E+L LF
Sbjct: 301 GFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLF 360

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
             ++      +   F  +L+  ++                                    
Sbjct: 361 ERMELGNAKPNHITFLAVLTACSHA----------------------------------- 385

Query: 324 GRFEEAKEIFANLS-HISTVP----WTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           G  ++  + F ++S H   VP    + A+     + G L+EA N   +M    I    + 
Sbjct: 386 GLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKM---QIKPTASV 442

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           ++++LRA     +  L +++   ++     S + S   L +MY+ SG   +A    + M 
Sbjct: 443 WSTLLRACRVHKNTMLAEEVAKKIMELEPRS-IGSHVVLSNMYSASGRWNEAAHLRESMR 501

Query: 439 ERNI 442
           ++ +
Sbjct: 502 KKGM 505



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   ++ LI  Y K G ++ A  +F+ M     VSWT +I GY+     REA  LF  M 
Sbjct: 305 NVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERME 364

Query: 65  TDGGSDPDYVTFATLLSGCSE 85
             G + P+++TF  +L+ CS 
Sbjct: 365 L-GNAKPNHITFLAVLTACSH 384


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 269/753 (35%), Positives = 426/753 (56%), Gaps = 8/753 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M + + VST +L   Y K  ++  AR++F+ +  +  V W  +I  Y+Q++   +A ++F
Sbjct: 131 MESDHYVSTTLL-HMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
             M  +G    + +TF  +L  CS+       +L+++  +  +  +        +LV+ Y
Sbjct: 190 YAMLLEG-VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFY 248

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
                L+ A R F    + + +   A+IT + +    +EA++LF  M   G K       
Sbjct: 249 GSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           A L+A  G   +  GR +H F+ +  F  +V   NAL+++Y K   + EA ++F  M   
Sbjct: 308 AVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +S+N +I  +  + Q+ E+L L   +Q       +  F   L + A    L  GR IH
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIH 427

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  + +   ++V + N+++DMY  C   ++A  +F  +     V W AMI+AY  +  L 
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLS 487

Query: 359 -EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            EAL LF +M       D  +F + L A A  ASL+ GK LH  +  +G  SN+   +A+
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAV 547

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L+MYAKSGSL  A + F +MP  +++SWN +ISA AQ+G A   L+ F  M   G  P+ 
Sbjct: 548 LNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPND 607

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYK-LRPKKEHYASMVDILCRSGCFDEAEKLM 536
           V+ +SV+SACSH GL+++G+Q F S+   +  + P+ EHY  MVD++ R+G  D AEK +
Sbjct: 608 VTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFI 667

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
           A  P +PD ++ S+++ + ++HK++E A+K+A+ L ++   R AA YV +SN+Y   G+ 
Sbjct: 668 AAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAA-YVVLSNLYDEVGKK 726

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  +++++ M E+ +RK  A+S + +K +VH F   D  + +T EI  ++E L  EM K 
Sbjct: 727 DEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKA 786

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT+  LHD  +E K   L YHSE+LAIAF LI+T  G+ + ++KNLR C DCH A 
Sbjct: 787 GYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTAT 846

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISKITGREI VRDS RFHHF +G CSC D+W
Sbjct: 847 KFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 281/568 (49%), Gaps = 15/568 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           ++L+  YV  G+L  A+  F+ M  + A++W  LI  + Q     +A  LF  M+ +G +
Sbjct: 37  DLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVA 96

Query: 70  DPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            P    F  +L  CS +P+   E  ++H  +      S   +  +L+  Y K   ++ AR
Sbjct: 97  -PVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDAR 155

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  +  K  V +NA+IT +A++  +E+AI++F  M   G K    TF   L A   L 
Sbjct: 156 KVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLK 215

Query: 189 DIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           D+ + + V   V +   + + +   A AL++ Y     + +A + F     ++ +    M
Sbjct: 216 DLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRH-RLELILATAM 274

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT Y   E++ E+L+LF+ +        +     +L+  +    L+ GR IH        
Sbjct: 275 ITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRF 334

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V   N+L++MY KCG  EEA E+F ++ H   + W  +I+A+ Q     EAL+L   
Sbjct: 335 DRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHL 394

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    + AD+ +F + L   A   +L+ G+ +HS+++ SG  ++V   +A+LDMY    S
Sbjct: 395 MQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKS 454

Query: 427 LKDAIQTFKEMPERNIVSWNALISA-CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
             DA + F+ M  R+ VSWNA+I+A  AQ   +   L  F+ M   G+ PD +S ++ LS
Sbjct: 455 TDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALS 514

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+    + EG +  +   ++  L        +++++  +SG    A K+  +MP  PD 
Sbjct: 515 ACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDV 572

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFK 573
           I W+ +I++   H +       ADQ+ +
Sbjct: 573 ISWNGMISAFAQHGH-------ADQVLR 593



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 234/484 (48%), Gaps = 10/484 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A LL   ++  + +   +VHA I K   +    + + LV  Y     L  A+  F  MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL--- 192
            +D++++  LI    + G +E+A+ LF  MQ  G  P +  F A L  G   AD  L   
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVL--GACSADPELLEE 118

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H  +  T    + +V+  LL +Y K   V +ARK+F  +     V +N MIT YA 
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--TQTIVTTAISEV 310
            + +++++++F  +        +  F  +L   +   DL++ + +    +      + + 
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             A +LV+ Y  CG  E+A   F+    +  +  TAMI+ Y Q+   +EAL LF  M   
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D+    ++L A +    L  G+ +H F+    F  +V +G+AL++MY K GSL++A
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           ++ F+ M  R+++SWN +I+A  Q+      L     M   G + D +S ++ L  C+  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAAS 417

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             + +G +  +S   +  ++       +++D+       D+A ++   M    D++ W++
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR-DQVSWNA 475

Query: 551 VINS 554
           +I +
Sbjct: 476 MITA 479


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/743 (33%), Positives = 427/743 (57%), Gaps = 5/743 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGG 68
           N LI+ Y K G + +A ++F+ M  R  VSW  ++    +   F E++ LF  +   D G
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG 294

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD  T  T++  C+        +  H   +K G    L + +SL+D Y K   L  AR
Sbjct: 295 LMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR 354

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGL 187
            +F +  +K+ +S+N++I G++K+     A +L  +MQ     K ++ T    L      
Sbjct: 355 VLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413

Query: 188 ADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
                 +++H + ++  F++ +  VANA +  Y+K   +  A  +F  M      S+N +
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +  N   +++L L+  ++ +  +   F  ++LLS  A    L  G++IH   +    
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF 533

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +  +  SLV +Y +CG+   AK  F N+   + V W  MI+ + Q     +AL++F +
Sbjct: 534 ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M  + I  D+ +    L A +++++L LGK+LH F ++S    + F   +L+DMYAK G 
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC 653

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ +   F  +  +  V+WN LI+    +G  +  ++ F+ M  +G++PDSV+ +++L+A
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTA 713

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+H GL+ EGL+Y   M   + ++PK EHYA +VD+L R+G  +EA +L+ ++P +PD  
Sbjct: 714 CNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSR 773

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WSS+++SCR +++L+  +K A++L ++   + A  YV +SN YA  G+W+ V ++++ M
Sbjct: 774 IWSSLLSSCRNYRDLDIGEKVANKLLELGPDK-AENYVLISNFYARLGKWDEVRKMRQRM 832

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           +E G++K    SW+E+  KV  F   DE   Q+ +I++    L +++ K GYKPDTSC L
Sbjct: 833 KEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVL 892

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           H+ +E+ K++ L+ HSE+LAI+F L+NT +G+ + V KNLR C DCH AIKL+SKI  RE
Sbjct: 893 HELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKRE 952

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD+ RFHHFK+GFCSC D+W
Sbjct: 953 IIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 282/584 (48%), Gaps = 11/584 (1%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           +FN+   +    W  L+ GY + + FR+A  +FV+M +     PD  T   ++  C    
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
                  VH   +K    S + + N+L+  Y K   ++ A +VF +MPQ++ VS+N+++ 
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270

Query: 148 GFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
              + G+ EE+  LF  + +   G  P   T    +       ++ LG   H   +K   
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL 330

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
              + V ++LLD+YSK   + EAR LF +  E + +S+N MI  Y+ +  ++ + +L R+
Sbjct: 331 CGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRK 389

Query: 266 LQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC 323
           +Q   +   ++     +L V   ++     ++IH   +    I S+  VAN+ V  YAKC
Sbjct: 390 MQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKC 449

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G    A+ +F  +       W A+I  +VQ G   +AL+L++ M  + +  D  T AS+L
Sbjct: 450 GSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLL 509

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A A L SLS GK++H  ++R+GF  + F   +L+ +Y + G +  A   F  M E+N+V
Sbjct: 510 SACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLV 569

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WN +I+  +QN      L  F  M+ S   PD +S++  L ACS    +  G +  +  
Sbjct: 570 CWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLG-KELHCF 628

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH----K 559
             K  L        S++D+  + GC ++++ +  ++  +  E+ W+ +I    IH    K
Sbjct: 629 AVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLK-GEVTWNVLITGYGIHGHGRK 687

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
            +E  K   +  F+ + +   A   A ++   VA   E + Q++
Sbjct: 688 AIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 238/477 (49%), Gaps = 35/477 (7%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           IC+S  DS     CL     VF    +K+   +NAL++G+ +  L  +A+ +FVEM  L 
Sbjct: 141 ICDSPYDS-----CL-----VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLT 190

Query: 170 -FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
            F P +FT    + A VG+ D+ LG  VH F +KT  + +VFV NAL+ +Y K   V  A
Sbjct: 191 EFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESA 250

Query: 229 RKLFGEMPEVDGVSYN-VMITCYAWNEQYKESLKLFRELQFTRFDRSQFP----FSTLLS 283
            K+F +MP+ + VS+N VM  C   N  ++ES  LF+ L     D    P      T++ 
Sbjct: 251 VKVFDKMPQRNLVSWNSVMYACLE-NGVFEESYGLFKGL--LNGDEGLMPDVATMVTVIP 307

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
           + A + ++++G   H   +      E+KV +SL+DMY+KCG   EA+ +F + +  + + 
Sbjct: 308 LCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVIS 366

Query: 344 WTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFV 402
           W +MI  Y +  +   A  L  +M     +  ++ T  ++L    E       K++H + 
Sbjct: 367 WNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYA 426

Query: 403 IRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +R GF+ S+    +A +  YAK GSL  A   F  M  + + SWNALI    QNG  +  
Sbjct: 427 LRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKA 486

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           L  +  M  SG +PD  ++ S+LSAC+    +  G +   SM +       +    S+V 
Sbjct: 487 LDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN-GFELDEFICISLVS 545

Query: 522 ILCRSGCFDEAEKLMAQMPF----EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           +  + G     + L+A++ F    E + + W+++IN     +N EF   A D   +M
Sbjct: 546 LYVQCG-----KILLAKLFFDNMEEKNLVCWNTMING--FSQN-EFPFDALDMFHQM 594



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 147/278 (52%), Gaps = 7/278 (2%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           LL +     +++IGR+IH     +    ++V +   LV MY+ C    ++  +F      
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
           +   W A++S Y++     +A+ +F+EM        D  T   +++A   +  + LG+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H F +++  +S+VF G+AL+ MY K G ++ A++ F +MP+RN+VSWN+++ AC +NG  
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 459 QATLKSFEDMVQS--GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
           + +   F+ ++    G  PD  ++++V+  C+  G +  G+  F+ +  K  L  + +  
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVN 337

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +S++D+  + G   EA  L      E + I W+S+I  
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 3/146 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +++  T  LI  Y K G +  ++ +F+ +  +  V+W +LI GY      R+A +LF  M
Sbjct: 636 EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSM 695

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIR 122
           + + G  PD VTF  LL+ C+      E ++    +   FG    L     +VD   +  
Sbjct: 696 Q-NAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAG 754

Query: 123 CLDLARRVFKEMPQK-DSVSFNALIT 147
            L+ A  +  E+P K DS  +++L++
Sbjct: 755 RLNEALELVNELPDKPDSRIWSSLLS 780


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/686 (34%), Positives = 401/686 (58%), Gaps = 14/686 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C + + A E   +H  I+K G++  L +   LV+ Y K   ++ A +VF  +P
Sbjct: 67  YFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP 126

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++  ++  L+TG+ +      A++LF++M   G  PS++T    L+A   L  I  G+Q
Sbjct: 127 RRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQ 186

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VHA+++K +   +  + N+L   YSK   +  A K F  + E D +S+  +I+    N Q
Sbjct: 187 VHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQ 246

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
              SL  F ++       +++  +++LS     L L +G QIH+ +I     S + + NS
Sbjct: 247 AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNS 306

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE-----------ALNLF 364
           ++ +Y KCG   EA+++F  +  ++ V W AMI+ + +  +L E           AL +F
Sbjct: 307 IMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 366

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            ++ R+ +  D  TF+S+L   + L +L  G+Q+H  +I+SG +++V  G+AL+ MY K 
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 426

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS+  A + F EMP R ++SW ++I+  A++G +Q  L+ FEDM   G +P+ V+ + VL
Sbjct: 427 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 486

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACSH GL +E L YF  M ++Y ++P  +H+A ++D+  R G  +EA  ++ +M FEP+
Sbjct: 487 SACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPN 546

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           E +WS +I  CR H   +    AA+QL K+ K +D   YV++ N++  AG+W+ VS+V+K
Sbjct: 547 ETIWSMLIAGCRSHGKSDLGFYAAEQLLKL-KPKDVETYVSLLNMHISAGRWKDVSKVRK 605

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP--DT 662
            M+E  V K+  +SW+ +K KV+ F  ND+ H Q+ E+ + +E ++ E+K  GY+P  D 
Sbjct: 606 LMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDV 665

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
                +E+EE  + S   HSE+LAIAF L+N P  +PI V+K++  C DCH  I+ IS +
Sbjct: 666 EVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLL 725

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDF 748
            GREI +RDS + H F +G+CSC  +
Sbjct: 726 KGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 248/479 (51%), Gaps = 28/479 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G + +A ++F+++  R   +WT L+ GY Q +    A +LF+ M  + G+ P
Sbjct: 105 LVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKM-LEAGAYP 163

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              T   +L+ CS   +     QVHA +IK+  +    I NSL   Y K R L+ A + F
Sbjct: 164 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF 223

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + +KD +S+ ++I+     G    ++  F++M   G KP+++T  + LSA   +  + 
Sbjct: 224 KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLD 283

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LG Q+H+  +K  +  ++ + N+++ LY K   ++EA+KLF  M  ++ V++N MI  +A
Sbjct: 284 LGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA 343

Query: 252 WNEQYKE-----------SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                 E           +L +F++L  +      F FS++LSV +N + L+ G QIH Q
Sbjct: 344 KMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQ 403

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +  +++V V  +LV MY KCG  ++A + F  +   + + WT+MI+ + + G  ++A
Sbjct: 404 IIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQA 463

Query: 361 LNLFIEMCRANISADQATFASILRA--SAELASLSL------GKQLHSFVIRSGFMSNVF 412
           L LF +M    I  +Q TF  +L A   A LA  +L       KQ +   +   F     
Sbjct: 464 LQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHF----- 518

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
             + L+DMY + G +++A     +M  E N   W+ LI+ C  +G +     + E +++
Sbjct: 519 --ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK 575



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 208/456 (45%), Gaps = 60/456 (13%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N L S Y K   L  A + F  + ++  +SWT +I       Q   +   F+DM 
Sbjct: 199 DTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDML 258

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           +D G  P+  T  ++LS C    T +   Q+H+  IK GY S ++I NS++  Y K   L
Sbjct: 259 SD-GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 317

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAK-EGLNEE----------AIKLFVEMQHLGFKPS 173
             A+++F+ M   + V++NA+I G AK   L E+          A+ +F ++   G KP 
Sbjct: 318 IEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPD 377

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
            FTF++ LS    L  +  G Q+H  ++K+  + +V V  AL+ +Y+K   + +A K F 
Sbjct: 378 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 437

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KL 289
           EMP    +S+  MIT +A +   +++L+LF +++      +Q  F  +LS  ++      
Sbjct: 438 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 497

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L     +  Q  +   +        L+DMY + GR EEA ++                 
Sbjct: 498 ALYYFELMQKQYNIKPVMDHFAC---LIDMYLRLGRVEEAFDV----------------- 537

Query: 350 AYVQKGNLEE---ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
             V K N E      ++ I  CR++  +D   +     A+ +L  L   K + ++V    
Sbjct: 538 --VHKMNFEPNETIWSMLIAGCRSHGKSDLGFY-----AAEQLLKLK-PKDVETYV---- 585

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                    +LL+M+  +G  KD  +  K M E  +
Sbjct: 586 ---------SLLNMHISAGRWKDVSKVRKLMKEEKV 612


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/800 (33%), Positives = 432/800 (54%), Gaps = 55/800 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+  T   +M ++    +  L+  R L  S    T   W  LI          +  +L+
Sbjct: 57  LPHDPTHIISMYLTFNSPAKALSVLRRLHPS--SHTVFWWNQLIRRSVHLGFLEDVLQLY 114

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+  G   PD+ TF  +L  C E  +      VHA +   G+   + + N LV  Y +
Sbjct: 115 RRMQRLGWR-PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGR 173

Query: 121 IRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFT 176
               + AR+VF EM ++   D VS+N+++  + + G +  A+K+F  M + LG +P   +
Sbjct: 174 CGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVS 233

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               L A   +   + G+QVH + +++   E+VFV NA++D+Y+K   + EA K+F  M 
Sbjct: 234 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 293

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL----DLQ 292
             D VS+N M+T Y+   ++ ++L LF +++  + + +   +S +++  A +      L 
Sbjct: 294 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 353

Query: 293 IGRQIH---TQTIVTTAIS-----------------------------------EVKVAN 314
           + RQ+    ++  V T +S                                   ++ V N
Sbjct: 354 VFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 413

Query: 315 SLVDMYAKCGRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN- 371
           +L+DMY+KC   + A+ +F  +     S V WT +I    Q G   EAL LF +M + + 
Sbjct: 414 ALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDN 473

Query: 372 -ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKD 429
            +  +  T +  L A A L +L  G+Q+H++V+R+ F S  +F  + L+DMY+KSG +  
Sbjct: 474 FVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDA 533

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  M +RN VSW +L++    +G  +  L+ F +M + G  PD V+ + VL ACSH
Sbjct: 534 ARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH 593

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++++G+ YFN M + + + P  EHYA MVD+L R+G  DEA +L+  MP +P   +W 
Sbjct: 594 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 653

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR++ N+E  + AA+QL ++E   D + Y  +SNIYA A  W+ V++++  M+  
Sbjct: 654 ALLSACRVYANVELGEYAANQLLELESGNDGS-YTLLSNIYANARCWKDVARIRYLMKNT 712

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SWV+ +     F A D  HP + +I   + +LMQ +K  GY PD   ALHD 
Sbjct: 713 GIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDV 772

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K + L  HSE+LA+A+ ++ T  G+PI + KNLRAC DCH+A   IS I   EI V
Sbjct: 773 DDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIV 832

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDSSRFHHFK+G CSCR +W
Sbjct: 833 RDSSRFHHFKNGSCSCRGYW 852


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/777 (32%), Positives = 425/777 (54%), Gaps = 40/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y+K G +  A ++F  +     VS+T +I G+++ N+ R+A ++F  MR+ G  
Sbjct: 109 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 168

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ +F  +L+ C          Q+HA +IK G+ +   + N+L+  Y K   LD   +
Sbjct: 169 LNEF-SFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQ 227

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLA 188
           +F EMP +D  S+N +I+   KE + E A +LF +M+ + GF+   FT +  L A  GLA
Sbjct: 228 LFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 287

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE--------------------- 227
            + +GR++HA V+K  F  N+ V NAL+  Y+K   +                       
Sbjct: 288 SM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 346

Query: 228 ----------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                     A ++F +MP  + +SYN +++ +  N +  ++L  F  +     + + F 
Sbjct: 347 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 406

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            + +L+     ++ +I +QIH   +     S   +  +L+DM  +CGR  +A+++F+  S
Sbjct: 407 LTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGS 466

Query: 338 HIST--VPWTAMISAYVQKGNLEEALNLFIE-MCRANISADQATFASILRASAELASLSL 394
              +  + WT+MI  Y +    EEA++LF +      +  D+    ++L     LA   +
Sbjct: 467 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 526

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GKQ+H   ++SGF+S++  G++++ MY+K  ++ DAI+ F  MP  +IVSWN LI+    
Sbjct: 527 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 586

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG--LIEEGLQYFNSMTQKYKLRPK 512
           +      L  +  M ++G +PD+V+ + ++SA  H    L++   + F SM   Y + P 
Sbjct: 587 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPT 646

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY S+V +L   G  +EAE+++ +MP EP+  +W +++++CRIH N    K+AA  L 
Sbjct: 647 VEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLL 706

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            M+ L D + Y+ +SN+Y+  G+W     V++ MR +G RK    SW+  ++KVH F A 
Sbjct: 707 AMKPL-DPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYAR 765

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D+ HPQ  +I   +E L+ E  K GY PDTS  LH+ +E  K + L YHS ++A  + L+
Sbjct: 766 DKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLL 825

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T  G PI ++KN+  C DCH  +K +S +TGREI +RD+S  H F +G CSC+D+W
Sbjct: 826 MTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 238/522 (45%), Gaps = 44/522 (8%)

Query: 91  ELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           ELI+ VHA I K   +  + + N+L+ +Y K+  +  A +VF  +   + VS+ A+I+GF
Sbjct: 89  ELIKAVHASIFKLAED--IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGF 146

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           AK     +A+++F  M+  G + ++F+F A L+  + L D+ LG Q+HA V+K  F+   
Sbjct: 147 AKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYT 206

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QF 268
           FV+NAL+ LY K   +    +LF EMP  D  S+N +I+       Y+ + +LFR++ + 
Sbjct: 207 FVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRI 266

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
             F    F  ST+L V A  L   +GR+IH   I     S + V N+L+  Y KCG  + 
Sbjct: 267 DGFRIDHFTLSTIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKH 325

Query: 329 AKEIFANLSHISTVPWTAMISAYV-------------------------------QKGNL 357
              +F  +     + WT MI+AY+                               Q G  
Sbjct: 326 VVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEG 385

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            +AL  F  M    +     T   +L A   L    + KQ+H F+++ GF SN    +AL
Sbjct: 386 SKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAAL 445

Query: 418 LDMYAKSGSLKDA--IQTFKEMPERNIVSWNALISACAQNGDAQATLKSF-EDMVQSGYQ 474
           LDM  + G + DA  + +     +   + W ++I   A+N   +  +  F +  ++    
Sbjct: 446 LDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMV 505

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
            D V+  +VL  C      E G Q  +    K           S++ +  +    D+A K
Sbjct: 506 VDKVASTAVLGVCGTLAFHEMGKQ-IHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIK 564

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           +   MP   D + W+ +I    +H+      +A     KMEK
Sbjct: 565 VFNVMPAH-DIVSWNGLIAGHLLHRQ---GDEALSVWSKMEK 602



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 39/485 (8%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T  +N L+  Y K G L +  +LF+ M  R   SW  +I    ++  +  AF+LF DMR 
Sbjct: 206 TFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRR 265

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL- 124
             G   D+ T +T+L       +     ++HA +IK G+ S + + N+L+  Y K   + 
Sbjct: 266 IDGFRIDHFTLSTILVAARGLASMVGR-EIHAHVIKIGFESNISVINALIRFYTKCGSIK 324

Query: 125 ------------------------------DLARRVFKEMPQKDSVSFNALITGFAKEGL 154
                                         DLA  VF +MP ++S+S+NA+++GF + G 
Sbjct: 325 HVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE 384

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             +A+  F  M   G + +DFT    L+A   L +  + +Q+H F++K  F  N  +  A
Sbjct: 385 GSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAA 444

Query: 215 LLDLYSKHDCVVEARKL--FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF-TRF 271
           LLD+ ++   + +A+K+   G   +   + +  MI  YA N Q +E++ LF + Q     
Sbjct: 445 LLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAM 504

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
              +   + +L V       ++G+QIH   + +  +S++ V NS++ MY+KC   ++A +
Sbjct: 505 VVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIK 564

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  +     V W  +I+ ++     +EAL+++ +M +A I  D  TF  I+ A     S
Sbjct: 565 VFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNS 624

Query: 392 LSLGKQLHSFVIRSGFM---SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +      F+           V   ++L+ +    G L++A +   +MP E     W A
Sbjct: 625 NLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRA 684

Query: 448 LISAC 452
           L+ AC
Sbjct: 685 LLDAC 689



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 12/333 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL +     D+++ + +H    +     ++ +AN+L+  Y K G    A ++F  LS  +
Sbjct: 78  LLDLSVRYDDVELIKAVHAS--IFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 135

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V +TAMIS + +     +A+ +F  M  + I  ++ +F +IL     L  L LG QLH+
Sbjct: 136 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 195

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            VI+ GF++  F  +AL+ +Y K G L   +Q F EMP R+I SWN +IS+  +    + 
Sbjct: 196 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 255

Query: 461 TLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             + F DM +  G++ D  +L ++L A    GL     +  ++   K           ++
Sbjct: 256 AFELFRDMRRIDGFRIDHFTLSTILVAAR--GLASMVGREIHAHVIKIGFESNISVINAL 313

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA-KKAADQLFKMEKLR 578
           +    + G       L  +M    D I W+ +I +      +EF     A ++F     R
Sbjct: 314 IRFYTKCGSIKHVVALFEKMRVR-DVITWTEMITA-----YMEFGLTDLALEVFDKMPAR 367

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           ++  Y A+ + +   G+          M E GV
Sbjct: 368 NSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 400


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/666 (34%), Positives = 392/666 (58%), Gaps = 3/666 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + LI  Y++ G +    +LF+ ++ +  V W +++ GY++        K F  MR
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D  S P+ VTF  +LS C+     +  +Q+H  ++  G +    I NSL+  Y K    
Sbjct: 232 MDQIS-PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A ++F+ M + D+V++N +I+G+ + GL EE++  F EM   G  P   TF++ L + 
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++   +Q+H ++++ +   ++F+ +AL+D Y K   V  A+ +F +   VD V + 
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ Y  N  Y +SL++FR L   +   ++    ++L V+   L L++GR++H   I  
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              +   +  +++DMYAKCGR   A EIF  LS    V W +MI+   Q  N   A+++F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M  + I  D  + ++ L A A L S S GK +H F+I+    S+V+S S L+DMYAK 
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
           G+LK A+  FK M E+NIVSWN++I+AC  +G  + +L  F +MV+ SG +PD ++ L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           +S+C H G ++EG+++F SMT+ Y ++P++EHYA +VD+  R+G   EA + +  MPF P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W +++ +CR+HKN+E A+ A+ +L  ++   ++  YV +SN +A A +WESV++V+
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDP-SNSGYYVLISNAHANAREWESVTKVR 769

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             M+ER V+K+  YSW+E+  + H+F + D  HP+++ I   + +L+ E++ EGY P   
Sbjct: 770 SLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829

Query: 664 CALHDE 669
             LH E
Sbjct: 830 LPLHPE 835



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 240/492 (48%), Gaps = 24/492 (4%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV-DSYCKIRCL---------- 124
            + LL  CS P+   +  QVHA           +I NS+  DSY   R L          
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHA----------FLIVNSISGDSYTDERILGMYAMCGSFS 87

Query: 125 DLARRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           D  +  ++   ++ S+  +N++I+ F + GL  +A+  + +M   G  P   TF   + A
Sbjct: 88  DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            V L +      +   V       N FVA++L+  Y ++  +    KLF  + + D V +
Sbjct: 148 CVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 207

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           NVM+  YA        +K F  ++  +   +   F  +LSV A+KL + +G Q+H   +V
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +    E  + NSL+ MY+KCGRF++A ++F  +S   TV W  MIS YVQ G +EE+L  
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM  + +  D  TF+S+L + ++  +L   KQ+H +++R     ++F  SAL+D Y K
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
              +  A   F +    ++V + A+IS    NG    +L+ F  +V+    P+ ++L+S+
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSI 447

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L        ++ G +    + +K     +     +++D+  + G  + A ++  ++  + 
Sbjct: 448 LPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KR 505

Query: 544 DEIMWSSVINSC 555
           D + W+S+I  C
Sbjct: 506 DIVSWNSMITRC 517



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 9/302 (2%)

Query: 256 YKESLKLFRELQFTRFDRSQFP--FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           YK+SL L      +RF     P   S LL   +N   L+ G+Q+H   IV +   +    
Sbjct: 17  YKKSLPLRNS---SRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTD 73

Query: 314 NSLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
             ++ MYA CG F +  ++F   +L   S  PW ++IS++V+ G L +AL  + +M    
Sbjct: 74  ERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG 133

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +S D +TF  +++A   L +      L   V   G   N F  S+L+  Y + G +    
Sbjct: 134 VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPS 193

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  + +++ V WN +++  A+ G   + +K F  M      P++V+   VLS C+   
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LI+ G+Q  + +     +  +     S++ +  + G FD+A KL   M    D + W+ +
Sbjct: 254 LIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCM 311

Query: 552 IN 553
           I+
Sbjct: 312 IS 313


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/747 (34%), Positives = 414/747 (55%), Gaps = 18/747 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y++ G+L +A ++F+ +  ++ V WT+LI  Y  +     A  LF  +  +G +  
Sbjct: 68  LVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA-L 126

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D + F ++LS CS  +       +H   ++ G     I+ ++LV  Y +   L  A  +F
Sbjct: 127 DAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALF 186

Query: 132 KEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
             + +  D V +NA+IT  ++ G   EA+++F  M  LG  P   TF +   A      +
Sbjct: 187 GHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL 246

Query: 191 ALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                +  HA + +T    +V VA AL++ Y++   +  ARK F EMPE + VS+  MI 
Sbjct: 247 RASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIA 306

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +     +  +++ F  +       ++   STL + +    DL++ R +         ++
Sbjct: 307 AFT-QIGHLLAVETFHAMLLEGVVPTR---STLFAALEGCEDLRVARLVEAIAQEIGVVT 362

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW-----TAMISAYVQKGNLEEALNL 363
           +V +   LV  YA+C   E+A  +F   S      W     TAMI+ Y Q  +      L
Sbjct: 363 DVAIVTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKL 419

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYA 422
           +       IS D+  + + L A A LA+LS G+Q+H+ V     +  +V  G+A++ MY 
Sbjct: 420 WGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + GSL+DA   F  MP R+ +SWNA++SA AQ+G  +     F  M+Q G+  + ++ L+
Sbjct: 480 QCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLN 539

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +LSAC+H GL++ G ++F++MT  + + P  EHY  MVD+L R G   +A  ++  MP  
Sbjct: 540 LLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVP 599

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD   W +++ +CRI+ + E  + AA+++ ++     AA YVA+ NIY+ AG+W+  + V
Sbjct: 600 PDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAA-YVALCNIYSAAGRWDDAAAV 658

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K M + G+RK+   S +E++SKVH F   D  HPQ+  I  ++E +M  +++ GY+  T
Sbjct: 659 RKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVT 718

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD +EE K + L++HSE+LAIAF +++TP+GS + V+KNLR C DCH A K ISK+
Sbjct: 719 GEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKV 778

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
            GREI VRD  RFHHFKDG CSC D+W
Sbjct: 779 FGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 3/243 (1%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A+SLV MY +CG  E A ++F  ++H S V WT +ISAYV +G+   A+ LF  + +  
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ D   F S+L A +    L+ G+ +H   + +G        SAL+ MY + GSL+DA 
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183

Query: 432 QTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
             F  +    ++V WNA+I+A +QNG  +  L+ F  M+Q G  PD V+ +SV  ACS  
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243

Query: 491 -GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             L    ++ F++   +  L        ++V+   R G  D A K  A+MP E + + W+
Sbjct: 244 PSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMP-ERNAVSWT 302

Query: 550 SVI 552
           S+I
Sbjct: 303 SMI 305



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 5/319 (1%)

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKL 231
           S F  AAA+        IA G+ +H+ +  +  +  + ++A++L+ +Y +   +  A  +
Sbjct: 25  SSFDSAAAVRLVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDV 84

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++     V + V+I+ Y        ++ LF  +           F ++LS  +++  L
Sbjct: 85  FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             GR IH   +      +  VA++LV MY +CG   +A  +F +L  H+  V W AMI+A
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL--SLGKQLHSFVIRSGFM 408
             Q G+  EAL +F  M +  I  D  TF S+ +A +   SL  S  K  H+ +  +G  
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLG 264

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
           S+V   +AL++ YA+ G +  A + F EMPERN VSW ++I+A  Q G   A +++F  M
Sbjct: 265 SDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLA-VETFHAM 323

Query: 469 VQSGYQPDSVSLLSVLSAC 487
           +  G  P   +L + L  C
Sbjct: 324 LLEGVVPTRSTLFAALEGC 342



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 186/434 (42%), Gaps = 41/434 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             + V    L++ Y + G +  AR+ F  M +R AVSWT +I  ++Q      A + F  
Sbjct: 264 GSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHA 322

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G  P   T    L GC +   A  L++  A   + G  + + I   LV +Y +  
Sbjct: 323 MLLE-GVVPTRSTLFAALEGCEDLRVAR-LVEAIAQ--EIGVVTDVAIVTDLVMAYARCD 378

Query: 123 CLDLARRVF--KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             + A RVF  +E  + D+    A+I  +A+        KL+      G  P    +  A
Sbjct: 379 GQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITA 438

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A   LA ++ GRQ+HA V     ++ +V + NA++ +Y +   + +AR  F  MP  D
Sbjct: 439 LDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARD 498

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIH 298
            +S+N M++  A + + ++   LFR +    FD  +  F  LLS  A+   ++ G     
Sbjct: 499 EISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFS 558

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-----WTAMISAYVQ 353
             T     +   +    +VD+  + GR  +A  I   +     VP     W A++ A   
Sbjct: 559 AMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM----PVPPDAATWMALMGACRI 614

Query: 354 KGNLEEA-------LNL-------FIEMCRANISA----DQATFASI-----LRASAELA 390
            G+ E         L L       ++ +C    +A    D A    I     LR    ++
Sbjct: 615 YGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVS 674

Query: 391 SLSLGKQLHSFVIR 404
           S+ +  ++H FV+R
Sbjct: 675 SIEIRSKVHEFVVR 688


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/676 (35%), Positives = 397/676 (58%), Gaps = 5/676 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +++L++  +   +   L  VH ++IK G+ S   + + L+D Y K   L  AR++F E+P
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +  V++N++I+     G ++EA++ +  M   G  P  +TF+A   A   L  I  G++
Sbjct: 63  SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122

Query: 196 VHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            H   V     V + FVA+AL+D+Y+K D + +A  +F  + E D V +  +I  YA + 
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+LK+F ++       +++  + +L    N  DL  G+ IH   + +   S V    
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQT 242

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY++C   E++ ++F  L + + V WT+ +   VQ G  E A+++F EM R +IS 
Sbjct: 243 SLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISP 302

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  T +SIL+A + LA L +G+Q+H+  ++ G   N ++G+AL+++Y K G++  A   F
Sbjct: 303 NPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVF 362

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             + E ++V+ N++I A AQNG     L+ FE +   G  P+ V+ +S+L AC++ GL+E
Sbjct: 363 DVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVE 422

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG Q F S+   + +    +H+  M+D+L RS   +EA  L+ ++   PD ++W +++NS
Sbjct: 423 EGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNS 481

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C+IH  +E A+K   ++ ++    D   ++ ++N+YA AG+W  V ++K  +R+  ++K 
Sbjct: 482 CKIHGEVEMAEKVMSKILELAP-GDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKS 540

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SWV++  +VH F A D  HP++ EI   +  LM+++K  GY P+T   L D DEE K
Sbjct: 541 PAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKK 600

Query: 675 VESLKYHSERLAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           + SL YHSE+LAIA+AL  T    + I + KNLR C DCH+ IK +S +TGR+I  RDS 
Sbjct: 601 ISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSK 660

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK G CSC+D+W
Sbjct: 661 RFHHFKGGLCSCKDYW 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 234/461 (50%), Gaps = 3/461 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI GY+K G+LA AR+LF+ +  R  V+W  +I  +    + +EA + + +M  + G  P
Sbjct: 41  LIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLME-GVLP 99

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLARRV 130
           D  TF+ +    S+        + H   +  G   +   + ++LVD Y K   +  A  V
Sbjct: 100 DAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLV 159

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F+ + +KD V F ALI G+A+ GL+ EA+K+F +M + G KP+++T A  L     L D+
Sbjct: 160 FRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDL 219

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+ +H  VVK+     V    +LL +YS+ + + ++ K+F ++   + V++   +   
Sbjct: 220 VNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGL 279

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N + + ++ +FRE+       + F  S++L   ++   L++G QIH  T+        
Sbjct: 280 VQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNK 339

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
               +L+++Y KCG  ++A+ +F  L+ +  V   +MI AY Q G   EAL LF  +   
Sbjct: 340 YAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNM 399

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKD 429
            +  +  TF SIL A      +  G Q+ + +  +  +   +   + ++D+  +S  L++
Sbjct: 400 GLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEE 459

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           A    +E+   ++V W  L+++C  +G+ +   K    +++
Sbjct: 460 AAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE 500



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 2/241 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L++ Y +   +  + ++FN +     V+WT  + G  Q  +   A  +F +M    
Sbjct: 240 SQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREM-IRC 298

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P+  T +++L  CS         Q+HA  +K G +       +L++ Y K   +D A
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  + + D V+ N++I  +A+ G   EA++LF  ++++G  P+  TF + L A    
Sbjct: 359 RSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNA 418

Query: 188 ADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             +  G Q+ A +   + +E  +     ++DL  +   + EA  L  E+   D V +  +
Sbjct: 419 GLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTL 478

Query: 247 I 247
           +
Sbjct: 479 L 479


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/697 (34%), Positives = 384/697 (55%), Gaps = 55/697 (7%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ--KDSVSFNAL 145
           T  +  Q+HA IIK  ++  L I                      + P     S  +N +
Sbjct: 55  TLEQTKQIHAHIIKTHFHHALQI-------------------PLNDFPSGLSPSAQWNFV 95

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           IT + K      A+ ++ +++ + F+  +F   + L A   ++   LG+++H FV+K   
Sbjct: 96  ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL 155

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +VFV NAL+ +Y +  CV  AR +F +M E D VS++ MI   + N+++  +L+L RE
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS--LVDMYAKC 323
           + F +   S+    +++++ A+  ++++G+ +H   I  +    + V  +  L+DMYAKC
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 275

Query: 324 G-------------------------------RFEEAKEIFANLSHISTVPWTAMISAYV 352
           G                               R EEA+ +F +  +   + WTAM+SAY 
Sbjct: 276 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYA 335

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           Q   +++A NLF +M  + +   + T  S+L   A   +L LGK +HS++ +     +  
Sbjct: 336 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 395

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             +AL+DMYAK G +  A + F E   R+I  WNA+I+  A +G  +  L  F +M + G
Sbjct: 396 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 455

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ ++ + +L ACSH GL+ EG + F  M   + L P+ EHY  MVD+L R+G  DEA
Sbjct: 456 VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEA 515

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            +++  MP +P+ I+W +++ +CR+HKN +  + AA QL ++E   +    V MSNIYA 
Sbjct: 516 HEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP-ENCGYNVLMSNIYAA 574

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
           A +W   + V+K M+  G++K   +S +E+   VH F   D+ HPQ   I   +  + ++
Sbjct: 575 ANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRK 634

Query: 653 MKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDC 712
           + + GY PDTS  L + DEE K  +L YHSE+LA+AF LI+T   +PI ++KNLR C DC
Sbjct: 635 LNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDC 694

Query: 713 HAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           HAA KL+SKI GR I VRD +RFHHF++G+CSC D+W
Sbjct: 695 HAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 219/458 (47%), Gaps = 36/458 (7%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           +  W  +I  Y+++NQ R A  ++  +R     + D     ++L  C +        ++H
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLR-KMDFEVDNFMAPSVLKACGQVSWTQLGKEIH 147

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
             ++K G +  + + N+L+  Y +  C++ AR VF +M ++D VS++ +I   ++    +
Sbjct: 148 GFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFD 207

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV--ANA 214
            A++L  EM  +  +PS+    + ++     A++ +G+ +HA+V++ +  E++ V    A
Sbjct: 208 MALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTA 267

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ------- 267
           LLD+Y+K   +  AR+LF  + +   VS+  MI     + + +E+  LF   Q       
Sbjct: 268 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIW 327

Query: 268 ----------------FTRFDR--------SQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
                           F  FD+        ++    +LLS+ A    L +G+ +H+    
Sbjct: 328 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 387

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  +  +LVDMYAKCG    A  +F          W A+I+ +   G  EEAL++
Sbjct: 388 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 447

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYA 422
           F EM R  +  +  TF  +L A +    ++ GK+L   ++ + G +  +     ++D+  
Sbjct: 448 FAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLG 507

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++G L +A +  K MP + N + W AL++AC  + + Q
Sbjct: 508 RAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 545



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 203/451 (45%), Gaps = 60/451 (13%)

Query: 164 EMQH-----LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL 218
           ++QH     L F P+         +   L+ +   +Q+HA ++KT+F   + +   L D 
Sbjct: 25  QLQHHPHSTLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQI--PLNDF 82

Query: 219 YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
            S            G  P      +N +IT Y    Q + +L ++ +L+   F+   F  
Sbjct: 83  PS------------GLSPS---AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMA 127

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            ++L         Q+G++IH   +      +V V N+L+ MY +C   E A+ +F  +  
Sbjct: 128 PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME 187

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              V W+ MI +  +    + AL L  EM    +   +    S++   A+ A++ +GK +
Sbjct: 188 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 247

Query: 399 HSFVIRSGFMSN--VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC---- 452
           H++VIR+    +  V + +ALLDMYAK G L  A Q F  + ++ +VSW A+I+ C    
Sbjct: 248 HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSN 307

Query: 453 -----------AQNGD-----------AQAT-----LKSFEDMVQSGYQPDSVSLLSVLS 485
                       QN D           AQA         F+ M  SG +P  V+++S+LS
Sbjct: 308 RLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLS 367

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            C+  G ++ G ++ +S   K ++        ++VD+  + G  + A +L  +     D 
Sbjct: 368 LCAVAGALDLG-KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDI 425

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            MW+++I    +H    + ++A D   +ME+
Sbjct: 426 CMWNAIITGFAMHG---YGEEALDIFAEMER 453



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 2/237 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +  +  VS   +I+G ++S  L  AR LF+S  +R  + WT ++  Y+Q N   +AF LF
Sbjct: 288 LTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 347

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MRT G   P  VT  +LLS C+     +    VH+ I K       I+  +LVD Y K
Sbjct: 348 DQMRTSG-VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 406

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A R+F E   +D   +NA+ITGFA  G  EEA+ +F EM+  G KP+D TF   
Sbjct: 407 CGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGL 466

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           L A      +  G+++   +V T   V  +     ++DL  +   + EA ++   MP
Sbjct: 467 LHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMP 523


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/747 (34%), Positives = 413/747 (55%), Gaps = 86/747 (11%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T+S    ++ ++K+  L  AR +F+ +       +T +I GY++ ++  +A KLF     
Sbjct: 12  TLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLF----- 66

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D  S  D V++ +++ GC   D  N                                 L 
Sbjct: 67  DRMSVRDVVSWNSMIKGC--LDCGN---------------------------------LG 91

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +A R+F EMP+K+ +S+  ++ G+ K G  E A +LF++M                    
Sbjct: 92  MATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMH------------------- 132

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
                               V++V   NA++  Y ++  V E  +LF EMP  D +S+  
Sbjct: 133 --------------------VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTS 172

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI     N + +E+L +F+++  +  + +   F+ +LS  AN ++  +G Q+H   +   
Sbjct: 173 MIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLG 232

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
                 ++ SL+  YA C + E A +IF      + V WTA+++AYV     ++AL +F 
Sbjct: 233 CFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFG 292

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M +     +Q+TF+  L+A   L +L  GK++H+  I+ G  ++VF G++L+ MY + G
Sbjct: 293 DMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECG 352

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           ++  A+  F+ + E++IVSWN++I   AQ+G     L  F  M++ G  P+ ++   +LS
Sbjct: 353 NVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLS 412

Query: 486 ACSHCGLIEEGLQYFNSMTQKYK---LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           ACS  G++ +G  +F  ++ +YK   LRP  +HYA MVDIL R G  DEAE+L+  MP +
Sbjct: 413 ACSRSGMLLKGRCFFEYIS-RYKSNVLRP--QHYACMVDILGRCGKLDEAEELVRYMPVK 469

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            + ++W +++++CR+H NLE A++AA  +  +E    ++ YV +SNIYA AG+W  VS++
Sbjct: 470 ANSMIWLALLSACRVHSNLEVAERAAKHILDLEP-NCSSAYVLLSNIYASAGRWADVSRM 528

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M++ G+ K    SWV L+ K H F + D  HP +  I  K++ L +++K+ GY PD 
Sbjct: 529 RVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQ 588

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
             ALHD ++E K E L +HSERLAIAF L++T EGS I VMKNLR C DCH+ IKL+SKI
Sbjct: 589 KFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKI 648

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
            GR+I VRDS RFHHFK+G CSC D+W
Sbjct: 649 VGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 241/494 (48%), Gaps = 27/494 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+ N      +I+GY ++  L  A +LF+ M  R  VSW  +I G         A +LF
Sbjct: 38  IPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLF 97

Query: 61  VDMRTDGGSDPDYVTFATLLSGC---SEPDTANEL-IQVHA-DIIKFGYNSILIICNSLV 115
            +M      + + +++ T+++G       + A  L + +H  D+  +         N++V
Sbjct: 98  DEM-----PEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAW---------NAMV 143

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             Y +   ++   R+F+EMP +D +S+ ++I G    G +EEA+ +F +M   G +P+  
Sbjct: 144 HGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWS 203

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           TFA  LSA     +  LG QVH  VVK     + F++ +L+  Y+    +  A K+F E 
Sbjct: 204 TFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNET 263

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              + V +  ++T Y WN +++++L++F ++       +Q  FS  L        L  G+
Sbjct: 264 LTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGK 323

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           +IHT  I     ++V V NSLV MY +CG    A  +F N++    V W ++I    Q G
Sbjct: 324 EIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHG 383

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG- 414
               AL  F +M R  +  ++ TF  +L A +    L  G+    ++ R  + SNV    
Sbjct: 384 FGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR--YKSNVLRPQ 441

Query: 415 --SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             + ++D+  + G L +A +  + MP + N + W AL+SAC  + + +   ++ + ++  
Sbjct: 442 HYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILD- 500

Query: 472 GYQPDSVSLLSVLS 485
             +P+  S   +LS
Sbjct: 501 -LEPNCSSAYVLLS 513


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/777 (32%), Positives = 425/777 (54%), Gaps = 40/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y+K G +  A ++F  +     VS+T +I G+++ N+ R+A ++F  MR+ G  
Sbjct: 127 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 186

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ +F  +L+ C          Q+HA +IK G+ +   + N+L+  Y K   LD   +
Sbjct: 187 LNEF-SFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQ 245

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLA 188
           +F EMP +D  S+N +I+   KE + E A +LF +M+ + GF+   FT +  L A  GLA
Sbjct: 246 LFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 305

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE--------------------- 227
            + +GR++HA V+K  F  N+ V NAL+  Y+K   +                       
Sbjct: 306 SM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 364

Query: 228 ----------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                     A ++F +MP  + +SYN +++ +  N +  ++L  F  +     + + F 
Sbjct: 365 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 424

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            + +L+     ++ +I +QIH   +     S   +  +L+DM  +CGR  +A+++F+  S
Sbjct: 425 LTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGS 484

Query: 338 HIST--VPWTAMISAYVQKGNLEEALNLFIE-MCRANISADQATFASILRASAELASLSL 394
              +  + WT+MI  Y +    EEA++LF +      +  D+    ++L     LA   +
Sbjct: 485 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 544

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GKQ+H   ++SGF+S++  G++++ MY+K  ++ DAI+ F  MP  +IVSWN LI+    
Sbjct: 545 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 604

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG--LIEEGLQYFNSMTQKYKLRPK 512
           +      L  +  M ++G +PD+V+ + ++SA  H    L++   + F SM   Y + P 
Sbjct: 605 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPT 664

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY S+V +L   G  +EAE+++ +MP EP+  +W +++++CRIH N    K+AA  L 
Sbjct: 665 VEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLL 724

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            M+ L D + Y+ +SN+Y+  G+W     V++ MR +G RK    SW+  ++KVH F A 
Sbjct: 725 AMKPL-DPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYAR 783

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D+ HPQ  +I   +E L+ E  K GY PDTS  LH+ +E  K + L YHS ++A  + L+
Sbjct: 784 DKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLL 843

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T  G PI ++KN+  C DCH  +K +S +TGREI +RD+S  H F +G CSC+D+W
Sbjct: 844 MTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 238/522 (45%), Gaps = 44/522 (8%)

Query: 91  ELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           ELI+ VHA I K   +  + + N+L+ +Y K+  +  A +VF  +   + VS+ A+I+GF
Sbjct: 107 ELIKAVHASIFKLAED--IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGF 164

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           AK     +A+++F  M+  G + ++F+F A L+  + L D+ LG Q+HA V+K  F+   
Sbjct: 165 AKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYT 224

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QF 268
           FV+NAL+ LY K   +    +LF EMP  D  S+N +I+       Y+ + +LFR++ + 
Sbjct: 225 FVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRI 284

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
             F    F  ST+L V A  L   +GR+IH   I     S + V N+L+  Y KCG  + 
Sbjct: 285 DGFRIDHFTLSTIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKH 343

Query: 329 AKEIFANLSHISTVPWTAMISAYV-------------------------------QKGNL 357
              +F  +     + WT MI+AY+                               Q G  
Sbjct: 344 VVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEG 403

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            +AL  F  M    +     T   +L A   L    + KQ+H F+++ GF SN    +AL
Sbjct: 404 SKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAAL 463

Query: 418 LDMYAKSGSLKDA--IQTFKEMPERNIVSWNALISACAQNGDAQATLKSF-EDMVQSGYQ 474
           LDM  + G + DA  + +     +   + W ++I   A+N   +  +  F +  ++    
Sbjct: 464 LDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMV 523

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
            D V+  +VL  C      E G Q  +    K           S++ +  +    D+A K
Sbjct: 524 VDKVASTAVLGVCGTLAFHEMGKQ-IHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIK 582

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           +   MP   D + W+ +I    +H+      +A     KMEK
Sbjct: 583 VFNVMPAH-DIVSWNGLIAGHLLHRQ---GDEALSVWSKMEK 620



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 227/485 (46%), Gaps = 39/485 (8%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T  +N L+  Y K G L +  +LF+ M  R   SW  +I    ++  +  AF+LF DMR 
Sbjct: 224 TFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRR 283

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL- 124
             G   D+ T +T+L       +     ++HA +IK G+ S + + N+L+  Y K   + 
Sbjct: 284 IDGFRIDHFTLSTILVAARGLASMVGR-EIHAHVIKIGFESNISVINALIRFYTKCGSIK 342

Query: 125 ------------------------------DLARRVFKEMPQKDSVSFNALITGFAKEGL 154
                                         DLA  VF +MP ++S+S+NA+++GF + G 
Sbjct: 343 HVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE 402

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             +A+  F  M   G + +DFT    L+A   L +  + +Q+H F++K  F  N  +  A
Sbjct: 403 GSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAA 462

Query: 215 LLDLYSKHDCVVEARKL--FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF-TRF 271
           LLD+ ++   + +A+K+   G   +   + +  MI  YA N Q +E++ LF + Q     
Sbjct: 463 LLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAM 522

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
              +   + +L V       ++G+QIH   + +  +S++ V NS++ MY+KC   ++A +
Sbjct: 523 VVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIK 582

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  +     V W  +I+ ++     +EAL+++ +M +A I  D  TF  I+ A     S
Sbjct: 583 VFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNS 642

Query: 392 LSLGKQLHSFVIRSGFM---SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +      F+           V   ++L+ +    G L++A +   +MP E     W A
Sbjct: 643 NLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRA 702

Query: 448 LISAC 452
           L+ AC
Sbjct: 703 LLDAC 707



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 12/333 (3%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL +     D+++ + +H    +     ++ +AN+L+  Y K G    A ++F  LS  +
Sbjct: 96  LLDLSVRYDDVELIKAVHAS--IFKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 153

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V +TAMIS + +     +A+ +F  M  + I  ++ +F +IL     L  L LG QLH+
Sbjct: 154 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 213

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            VI+ GF++  F  +AL+ +Y K G L   +Q F EMP R+I SWN +IS+  +    + 
Sbjct: 214 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 273

Query: 461 TLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             + F DM +  G++ D  +L ++L A    GL     +  ++   K           ++
Sbjct: 274 AFELFRDMRRIDGFRIDHFTLSTILVAAR--GLASMVGREIHAHVIKIGFESNISVINAL 331

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA-KKAADQLFKMEKLR 578
           +    + G       L  +M    D I W+ +I +      +EF     A ++F     R
Sbjct: 332 IRFYTKCGSIKHVVALFEKMRVR-DVITWTEMITA-----YMEFGLTDLALEVFDKMPAR 385

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           ++  Y A+ + +   G+          M E GV
Sbjct: 386 NSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 418


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/642 (37%), Positives = 369/642 (57%), Gaps = 10/642 (1%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           NS++  YCK   L  AR+VF EM +++ VS+N +I+ +A+ G+ ++   +F  M  L  K
Sbjct: 49  NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETK 108

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+  T+   L + +  + + +G+Q+H+  +++    N  V  A+ ++Y K   +  A  +
Sbjct: 109 PNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELV 168

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +M E + V++  ++  Y   E+  ++L LF ++     +  ++ FS +L   A   +L
Sbjct: 169 FEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEEL 228

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             GRQIH   +     SEV V   LVD Y KC   E A + F  +S  + V W+A+I+ Y
Sbjct: 229 NFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGY 288

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  EEAL  F  +   ++  +  T+ SI +A + LA  + G Q H+  I+S  ++  
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQ 348

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              SA++ MY++ G L  A + F+ + + + V+W A+I+  A  G+A   LK F  M   
Sbjct: 349 HGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDC 408

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +P++V+ ++VL+ACSH GL+ EG QY  SM+  Y +    +HY  MVDI  R+G   E
Sbjct: 409 GVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQE 468

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A +L+  MPF PD + W  ++  C  ++NLE  + AA+ LF+++   D A Y+ M N+YA
Sbjct: 469 ALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDP-EDTAGYILMFNLYA 527

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G+W+  + V+K M ER +RK  + SW+ +K KVH F   D+ HPQT EI  K+E L  
Sbjct: 528 SFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALND 587

Query: 652 EMKKEG----YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            + KE      + D S +L +  E++ V     HSERLA+AF LI+TP  +P++V KNLR
Sbjct: 588 SVIKEETGLLTEEDVSNSLPERKEQLLV-----HSERLALAFGLISTPSSAPVVVFKNLR 642

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AC DCH   K +S ITGREI VRDS RFHHFK G CSC D+W
Sbjct: 643 ACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 229/445 (51%), Gaps = 3/445 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K G+LA AR++F+ M +R  VSW  +I  Y++   F + F +F +M  +  +
Sbjct: 49  NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNM-LELET 107

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  T+   L     P       Q+H+  I+ G  S   +  ++ + Y K   L+ A  
Sbjct: 108 KPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAEL 167

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF++M +K++V++  ++ G+ +     +A+ LF +M + G +  ++ F+  L A  GL +
Sbjct: 168 VFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEE 227

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GRQ+H  +VK      V V   L+D Y K   +  A K F  + E + VS++ +IT 
Sbjct: 228 LNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITG 287

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y    +++E+LK F  L+    D + F ++++    +   D   G Q H   I ++ ++ 
Sbjct: 288 YCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAY 347

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
               ++++ MY++CGR + A  +F ++     V WTA+I+ Y  +GN  EAL LF  M  
Sbjct: 348 QHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD 407

Query: 370 ANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +  TF ++L A +    +  G+Q L S     G  + +     ++D+Y+++G L+
Sbjct: 408 CGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQ 467

Query: 429 DAIQTFKEMP-ERNIVSWNALISAC 452
           +A++  + MP   + +SW  L+  C
Sbjct: 468 EALELIRSMPFSPDAMSWKCLLGGC 492



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 194/394 (49%), Gaps = 14/394 (3%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+  G   S  ++     A   +  +  GR  H  + +T      F+ N++L +Y K   
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +ARK+F EM E + VS+N +I+ YA N  + +   +F  +       +   +   L  
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
           + N   L+IG+QIH+  I +   S   V  ++ +MY KCG  E A+ +F  +S  + V W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           T ++  Y Q     +AL LF +M    +  D+  F+ +L+A A L  L+ G+Q+H  +++
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G  S V  G+ L+D Y K  +L+ A + F+ + E N VSW+ALI+   Q G+ +  LK+
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ------KYKLRPKKEHYAS 518
           FE +       +S +  S+  ACS        L  FNS  Q      K  L   +   ++
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACS-------ALADFNSGAQAHADAIKSSLVAYQHGESA 353

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           M+ +  R G  D A ++   +  +PD + W+++I
Sbjct: 354 MITMYSRCGRLDYATRVFESID-DPDAVAWTAII 386



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 2/261 (0%)

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           GR  H Q   T       + NS++ MY KCG   +A+++F  +   + V W  +ISAY +
Sbjct: 29  GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            G  ++   +F  M       + +T+   LR+    + L +GKQ+HS  IRSG  SN   
Sbjct: 89  NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 148

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
            +A+ +MY K G L+ A   F++M E+N V+W  ++    Q       L  F  MV  G 
Sbjct: 149 NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGV 208

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
           + D      VL AC+    +  G Q    +  K  L  +      +VD   +    + A 
Sbjct: 209 ELDEYVFSIVLKACAGLEELNFGRQIHGHIV-KLGLESEVSVGTPLVDFYVKCSNLESAT 267

Query: 534 KLMAQMPFEPDEIMWSSVINS 554
           K    +  EP+++ WS++I  
Sbjct: 268 KAFEWIS-EPNDVSWSALITG 287


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/658 (35%), Positives = 385/658 (58%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y ++G +  AR LF+ M ++  V W +++ G+ +  +   A K+F DMR +  + P
Sbjct: 13  LIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR-NCQTKP 71

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + +TFA++LS C+    +    Q+H  +I  G++   ++ N+LV  Y K   L  A ++F
Sbjct: 72  NSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLF 131

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP  + V++N +I GF + G  +EA  LF EM   G  P   TFA+ L +    A + 
Sbjct: 132 NTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLK 191

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H ++++     +VF+ +AL+D+Y K   V  A K+F +   VD V    +I+ Y 
Sbjct: 192 QGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYV 251

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    ++L++FR L   +   +    +++L   A    L +G+++H   +         
Sbjct: 252 LNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRH 311

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++++DMYAKCGR + A +IF  +     V W A+I+   Q G  +EA++LF +M R  
Sbjct: 312 VGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREG 371

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +S D  + ++ L A A L +L  GK +HSF+I+  F S VF+ SAL+DMY K G+L  A 
Sbjct: 372 LSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVAR 431

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M E+N VSWN++I+A   +G  + +L  F  M++ G QPD V+ L++LSAC H G
Sbjct: 432 CVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAG 491

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +++G+QYF  MT++Y +  + EHYA +VD+  R+G  +EA + +  MPF PD+ +W ++
Sbjct: 492 QVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTL 551

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E A+ A+  L  ++   ++  YV +SN++A AGQW SV +++  M++RGV
Sbjct: 552 LGACRVHGNVELAEVASRCLLDLDP-ENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGV 610

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           +KV  YSW+E+    H+F A D  HP++ +I   + NL+ E++KEGY P     +H +
Sbjct: 611 QKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKPYLPMHPQ 668



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/506 (31%), Positives = 266/506 (52%), Gaps = 2/506 (0%)

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G+N    + +SL+  Y +  C++ ARR+F +MP KD V +N ++ GF K G    A+K+F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            +M++   KP+  TFA+ LS     A    G Q+H  V+   F  +  VANAL+ +YSK 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             + +A KLF  MP+ + V++N MI  +  N    E+  LF E+           F++ L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
             V     L+ G++IH   +      +V + ++L+D+Y KC     A +IF   +++  V
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
             TA+IS YV  G   +AL +F  +    +S +  T AS+L A A LA+L+LGK+LH+ +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++ G       GSA++DMYAK G L  A Q F+ MPE++ V WNA+I+ C+QNG  Q  +
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M + G   D VS+ + LSAC++   +  G +  +S   K     +    ++++D+
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHG-KAIHSFMIKGAFDSEVFAESALIDM 420

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             + G    A + +  M  E +E+ W+S+I +   H +LE +     ++ +     D   
Sbjct: 421 YGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRE 608
           ++ + +    AGQ +   Q  + M E
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTE 505



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 241/457 (52%), Gaps = 3/457 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N L++ Y K G L+ A +LFN+M D   V+W  +I G+ Q     EA  LF +M 
Sbjct: 107 DPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMI 166

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + G S PD +TFA+ L   +E  +  +  ++H  I++ G    + + ++L+D Y K R +
Sbjct: 167 SAGVS-PDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDV 225

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            +A ++FK+    D V   A+I+G+   GLN +A+++F  +      P+  T A+ L A 
Sbjct: 226 GMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPAC 285

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GLA + LG+++HA ++K    E   V +A++D+Y+K   +  A ++F  MPE D V +N
Sbjct: 286 AGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWN 345

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +IT  + N + +E++ LFR++            S  LS  AN   L  G+ IH+  I  
Sbjct: 346 AIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG 405

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              SEV   ++L+DMY KCG    A+ +F  +   + V W ++I+AY   G+LE +L LF
Sbjct: 406 AFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALF 465

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M    I  D  TF +IL A      +  G Q    +    G  + +   + ++D++ +
Sbjct: 466 HKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGR 525

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +G L +A +T K MP   +   W  L+ AC  +G+ +
Sbjct: 526 AGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVE 562


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 266/800 (33%), Positives = 427/800 (53%), Gaps = 55/800 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+  T   +M ++    +  L+  R L  S    T   W  LI          +  +L+
Sbjct: 76  LPHDPTHIISMYLTFNSPAKALSVLRRLHPS--SHTVFWWNQLIRRSVHLGFLEDVLQLY 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+  G   PD+ TF  +L  C E  +      VHA +   G+   + + N LV  Y +
Sbjct: 134 RRMQRLGWR-PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGR 192

Query: 121 IRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFT 176
               + AR+VF EM ++   D VS+N+++  + + G +  A+K+F  M + LG +P   +
Sbjct: 193 CGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVS 252

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               L A   +   + G+QVH + +++   E+VFV NA++D+Y+K   + EA K+F  M 
Sbjct: 253 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 312

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS----------------- 279
             D VS+N M+T Y+   ++ ++L LF +++  + + +   +S                 
Sbjct: 313 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 372

Query: 280 ------------------TLLSVVANKLDLQIGRQIHTQTIV-------TTAISEVKVAN 314
                             +LLS  A+   L  G++ H   I             ++ V N
Sbjct: 373 VFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 432

Query: 315 SLVDMYAKCGRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN- 371
           +L+DMY+KC   + A+ +F  +     S V WT +I    Q G   EAL LF +M + + 
Sbjct: 433 ALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDN 492

Query: 372 -ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKD 429
            +  +  T +  L A A L +L  G+Q+H++V+R+ F S  +F  + L+DMY+KSG +  
Sbjct: 493 FVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDA 552

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F  M +RN VSW +L++    +G  +  L+ F +M +    PD V+ + VL ACSH
Sbjct: 553 ARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSH 612

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++++G+ YFN M + + + P  EHYA MVD+L R+G  DEA +L+  MP +P   +W 
Sbjct: 613 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 672

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++++CR++ N+E  + AA+QL ++E   D + Y  +SNIYA A  W+ V++++  M+  
Sbjct: 673 ALLSACRVYANVELGEYAANQLLELESGNDGS-YTLLSNIYANARCWKDVARIRYLMKNT 731

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K    SWV+ +     F A D  HP + +I   + +LMQ +K  GY PD   ALHD 
Sbjct: 732 GIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDV 791

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+E K + L  HSE+LA+A+ ++ T  G+PI + KNLRAC DCH+A   IS I   EI V
Sbjct: 792 DDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIV 851

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDSSRFHHFK+G CSCR +W
Sbjct: 852 RDSSRFHHFKNGSCSCRGYW 871


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/661 (36%), Positives = 380/661 (57%), Gaps = 9/661 (1%)

Query: 94  QVHADIIKFGYNSIL----IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           Q+HA +I F   SIL     +   L   Y     +  A  +F  +  K+S  +N +I G+
Sbjct: 80  QLHAHMISF---SILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGY 136

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A  GL  +++ L+ EM   G +  +FT+   L A   L  + +GR+VH+ VV      ++
Sbjct: 137 ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           +V N+LL +Y+K   +  AR +F  M E D  S+N MI+ YA N     +  +F  +   
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEE 328
                      LLS  A+   ++ G+ IH   +  +  +  K   NSL++MY  C    +
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A+ +F  +    TV W +MI  Y + G+  E+L LF  M       DQ TF ++L A  +
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           +A+L  G  +HS++++ GF +N   G+AL+DMY+K GSL  + + F EMP++++VSW+A+
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           ++    +G  +  +   + M  +   PD+    S+LSACSH GL+ EG + F  M ++Y 
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           ++P   HY+ MVD+L R+G  DEA  ++  M  +P   +W++++ + R+HKN++ A+ +A
Sbjct: 497 VKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA 556

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            ++F M   +  + Y+ +SNIYA   +W+ V +V+  +R +G++K    S++EL + VH 
Sbjct: 557 QKVFDMNP-KVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHR 615

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ H QT +I  K+  L Q++K+ GYKPDTS   +D +EE+K + L  HSERLAIA
Sbjct: 616 FLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIA 675

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           FALINT  G+ I + KNLR C DCH   KLIS++TGREI +RD  RFHHF  GFCSC D+
Sbjct: 676 FALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDY 735

Query: 749 W 749
           W
Sbjct: 736 W 736



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 216/453 (47%), Gaps = 8/453 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            NT     L + Y   G ++ A  +F+ +V + +  W  +I GY+      ++  L+ +M
Sbjct: 93  NNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREM 152

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G   D  T+  +L  C +        +VH++++  G  S + + NSL+  Y K   
Sbjct: 153 LC-FGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGD 211

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  AR VF  M ++D  S+N +I+G+AK   +  A  +F  M   G      T    LSA
Sbjct: 212 MGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSA 271

Query: 184 GVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
              L  +  G+ +H + V+ +    N F  N+L+++Y   +C+V+AR+LF  +   D VS
Sbjct: 272 CADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVS 331

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI  YA N    ESL+LFR +        Q  F  +L        L+ G  IH+  +
Sbjct: 332 WNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLV 391

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                +   V  +LVDMY+KCG    ++ +F  +   S V W+AM++ Y   G   EA++
Sbjct: 392 KKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAIS 451

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMY 421
           +   M   ++  D   F SIL A +    +  GK++   + +   +    S  S ++D+ 
Sbjct: 452 ILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLL 511

Query: 422 AKSGSLKDA---IQTFKEMPERNIVSWNALISA 451
            ++G L +A   I+T +  P  +I  W AL++A
Sbjct: 512 GRAGHLDEAYVIIRTMEIKPTSDI--WAALLTA 542



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 223/464 (48%), Gaps = 35/464 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G++ TAR +F+ M +R   SW  +I GY++      AF +F D+    G 
Sbjct: 200 NSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVF-DLMGKAGL 258

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCLDL 126
             D  T   LLS C++     E   +H   ++     YN      NSL++ YC   C+  
Sbjct: 259 FADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFT--NSLIEMYCNCNCMVD 316

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F+ +  KD+VS+N++I G+A+ G   E+++LF  M   G  P   TF A L A   
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +A +  G  +H+++VK  F  N  V  AL+D+YSK   +  +R++F EMP+   VS++ M
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI----HTQTI 302
           +  Y  + + +E++ +   ++          F+++LS  ++   +  G++I      +  
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA- 360
           V  A+S     + +VD+  + G  +EA  I   +    T   W A+++A     N++ A 
Sbjct: 497 VKPALSHY---SCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAE 553

Query: 361 --------LNLFI---EMCRANISADQATFASILRASAELASLSLGK-------QLHSFV 402
                   +N  +    +C +NI A +  +  + R  A +    L K       +L + V
Sbjct: 554 ISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMV 613

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
            R  F+    S     D+YAK   LK  ++     P+ ++V ++
Sbjct: 614 HR--FLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYD 655



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 1/196 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N N   TN LI  Y     +  AR LF  +  +  VSW  +I GY++     E+ +LF
Sbjct: 293 IGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLF 352

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG S PD VTF  +L  C +       + +H+ ++K G+++  I+  +LVD Y K
Sbjct: 353 RRMALDG-SGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSK 411

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  +RRVF EMP K  VS++A++ G+   G   EAI +   M+     P +  F + 
Sbjct: 412 CGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSI 471

Query: 181 LSAGVGLADIALGRQV 196
           LSA      +  G+++
Sbjct: 472 LSACSHAGLVVEGKEI 487



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
            ++L++     S   G+QLH+ +I    + +N +  + L   YA  G +  A   F  + 
Sbjct: 63  GALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIV 122

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
            +N   WN +I   A NG    +L  + +M+  G + D+ +   VL AC    L+E G
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIG 180


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/651 (36%), Positives = 369/651 (56%), Gaps = 3/651 (0%)

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           + G+     +CN L+D Y K    D A  VF  +  K+  S+  ++  FA+    +    
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
            F  M   G  P +   +  LSA     +I +GR +   ++ T   E   V  AL+ LY 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K     +A  +F  M   D V+++ M+  YA N   +E+L LFR++       ++    +
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
            L   A+  DL+ G  +H +       S V V  +LV++Y KCGR E A E F  +   +
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W+A+ +AY +     +A+ +   M    ++ +  TF S+L A A +A+L  G+++H 
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 401 --FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
              V+  G  S+V+  +AL++MY+K G+L  A   F ++   ++V WN+LI+  AQ+G  
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQT 362

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L+ FE M   G QP  ++  SVL ACSH G++++G ++F S    + + P+ EH+  
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGC 422

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           MVD+L R+G   ++E L+  MPFEP  + W + + +CR ++N++ A  AA+ LF+++  R
Sbjct: 423 MVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDP-R 481

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
             APYV +SN+YA AG+W  V+++++AM+     K    SW+E+K +VH F + D  HP+
Sbjct: 482 KRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPR 541

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
             EI  +++ L + MK  GY PDT   LHD  +E+K   + YHSE+LA+AFAL+ TPEGS
Sbjct: 542 IGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGS 601

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           PI V+KNLR C DCH A K ISK+  REI VRD +RFH F++G CSC D+W
Sbjct: 602 PIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 218/472 (46%), Gaps = 7/472 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    N+LI  Y K      A  +F+ +  +   SWT+++  +++   F   +  F  M
Sbjct: 8   RNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGM 67

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI-R 122
              G  +P  V  +  LS C++         +   I+  G     I+  +LV  Y K+  
Sbjct: 68  LLQG-INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C D A  VF  M  +D V+++A++  +A+ G   EA+ LF +M   G  P+  T  + L 
Sbjct: 127 CTDAAS-VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLD 185

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L D+  G  +H  V        V V  AL++LY K   +  A + FG++ E + V+
Sbjct: 186 ACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVA 245

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ +   YA N++ ++++++   +       +   F ++L   A    L+ GR+IH +  
Sbjct: 246 WSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIH 305

Query: 303 VTTAI--SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           V      S+V V  +LV+MY+KCG    A  +F  ++H+  V W ++I+   Q G  E+A
Sbjct: 306 VLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKA 365

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLD 419
           L LF  M    +     TF S+L A +    L  G K   SF+   G          ++D
Sbjct: 366 LELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVD 425

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +  ++G + D+      MP E + V+W A + AC    +    + + E++ Q
Sbjct: 426 LLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQ 477


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 412/748 (55%), Gaps = 19/748 (2%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           PN   ++ ++   G+V+SG +  A ++F  M       W ++I GY+    F+EA   + 
Sbjct: 56  PNDLNITRDL--CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYY 113

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M  +G    D  TF  ++  C E        +VH  +IK G++  + +CN L+D Y KI
Sbjct: 114 RMECEG-IRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKI 172

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++LA +VF EMP +D VS+N++++G+  +G    ++  F EM  LG K   F   +AL
Sbjct: 173 GFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISAL 232

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A      +  G ++H  V+++    ++ V  +L+D+Y K   V  A ++F  +   + V
Sbjct: 233 GACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIV 292

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++N MI         +E  K+  ++              LL   +    L  G+ IH   
Sbjct: 293 AWNAMIG------GMQEDDKVIPDV---------ITMINLLPSCSQSGALLEGKSIHGFA 337

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I    +  + +  +LVDMY KCG  + A+ +F  ++  + V W  M++AYVQ    +EAL
Sbjct: 338 IRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEAL 397

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            +F  +    +  D  T AS+L A AELAS S GKQ+HS++++ G  SN F  +A++ MY
Sbjct: 398 KMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMY 457

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK G L+ A + F  M  +++VSWN +I A A +G  + +++ F +M   G++P+  + +
Sbjct: 458 AKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFV 517

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           S+L+ACS  GLI+EG  +FNSM  +Y + P  EHY  M+D+L R+G  DEA+  + +MP 
Sbjct: 518 SLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPL 577

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P   +W S++ + R H ++  A+ AA  +  + K  +   YV +SN+YA AG+WE V +
Sbjct: 578 VPTARIWGSLLAASRNHNDVVLAELAARHILSL-KHDNTGCYVLLSNMYAEAGRWEDVDR 636

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           +K  M+E+G+ K    S V++  +   F   D  H  TN I   ++ L++++ ++ Y   
Sbjct: 637 IKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHS 696

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            +     +  + +  S +YHS +LAI F LI+T  G+P++V KN R C DCH A K IS+
Sbjct: 697 LTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQ 756

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +T REI V D+  FHHF+DG CSCRD+W
Sbjct: 757 VTKREIVVGDAKVFHHFRDGCCSCRDYW 784


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/753 (35%), Positives = 426/753 (56%), Gaps = 8/753 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M + + VST +L   Y K  ++  AR++F+ +  +  V W  +I  Y+Q++   +A ++F
Sbjct: 131 MESDHYVSTTLL-HMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
             M  +G    + +TF  +L  CS+       +L+++  +  +  +        +LV+ Y
Sbjct: 190 YAMLLEG-VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFY 248

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
                L+ A R F    + + +   A+IT + +    +EA++LF  M   G K       
Sbjct: 249 GSCGDLEQAFRAFSRH-RLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           A L+A  G   +  GR +H F+ +  F  +V   NAL+++Y K   + EA ++F  M   
Sbjct: 308 AVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHR 367

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +S+N +I  +  + Q+ E+L L   +Q       +  F   L + A    L  GR IH
Sbjct: 368 DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIH 427

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  + +   ++V + N+++DMY  C   ++A  +F  +     V W AMI+AY  +  L 
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLS 487

Query: 359 -EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            EAL LF +M       D  +F + L A A  ASL+ GK LH  +  +G  SN+   +A+
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAV 547

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           L+MYAKSG+L  A + F +MP  +++SWN +ISA AQ+G A   L+ F  M   G  P+ 
Sbjct: 548 LNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPND 607

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYK-LRPKKEHYASMVDILCRSGCFDEAEKLM 536
           V+ +SV+SACSH GL+++G+Q F S+   +  + P+ EHY  MVD++ R+G  D AEK +
Sbjct: 608 VTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFI 667

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
           A  P +PD ++ S+++ + ++HK++E A+K+A+ L ++   R AA YV +SN+Y   G+ 
Sbjct: 668 AAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAA-YVVLSNLYDEVGKK 726

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  +++++ M E+ +RK  A+S + +K +VH F   D  + +T EI  ++E L  EM K 
Sbjct: 727 DEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKA 786

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY PDT+  LHD  +E K   L YHSE+LAIAF LI+T  G+ + ++KNLR C DCH A 
Sbjct: 787 GYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTAT 846

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISKITGREI VRDS RFHHF +G CSC D+W
Sbjct: 847 KFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 281/568 (49%), Gaps = 15/568 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           ++L+  YV  G+L  A+  F+ M  + A++W  LI  + Q     +A  LF  M+ +G +
Sbjct: 37  DLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVA 96

Query: 70  DPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            P    F  +L  CS +P+   E  ++H  +      S   +  +L+  Y K   ++ AR
Sbjct: 97  -PVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDAR 155

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  +  K  V +NA+IT +A++  +E+AI++F  M   G K    TF   L A   L 
Sbjct: 156 KVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLK 215

Query: 189 DIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           D+ + + V   V +   + + +   A AL++ Y     + +A + F     ++ +    M
Sbjct: 216 DLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRH-RLELILATAM 274

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT Y   E++ E+L+LF+ +        +     +L+  +    L+ GR IH        
Sbjct: 275 ITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRF 334

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V   N+L++MY KCG  EEA E+F ++ H   + W  +I+A+ Q     EAL+L   
Sbjct: 335 DRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHL 394

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    + AD+ +F + L   A   +L+ G+ +HS+++ SG  ++V   +A+LDMY    S
Sbjct: 395 MQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKS 454

Query: 427 LKDAIQTFKEMPERNIVSWNALISA-CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
             DA + F+ M  R+ VSWNA+I+A  AQ   +   L  F+ M   G+ PD +S ++ LS
Sbjct: 455 TDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALS 514

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+    + EG +  +   ++  L        +++++  +SG    A K+  +MP  PD 
Sbjct: 515 ACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDV 572

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFK 573
           I W+ +I++   H +       ADQ+ +
Sbjct: 573 ISWNGMISAFAQHGH-------ADQVLR 593



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 234/484 (48%), Gaps = 10/484 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A LL   ++  + +   +VHA I K   +    + + LV  Y     L  A+  F  MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL--- 192
            +D++++  LI    + G +E+A+ LF  MQ  G  P +  F A L  G   AD  L   
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVL--GACSADPELLEE 118

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H  +  T    + +V+  LL +Y K   V +ARK+F  +     V +N MIT YA 
Sbjct: 119 GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQ 178

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--TQTIVTTAISEV 310
            + +++++++F  +        +  F  +L   +   DL++ + +    +      + + 
Sbjct: 179 QDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDS 238

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
             A +LV+ Y  CG  E+A   F+    +  +  TAMI+ Y Q+   +EAL LF  M   
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D+    ++L A +    L  G+ +H F+    F  +V +G+AL++MY K GSL++A
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           ++ F+ M  R+++SWN +I+A  Q+      L     M   G + D +S ++ L  C+  
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATS 417

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             + +G +  +S   +  ++       +++D+       D+A ++   M    D++ W++
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR-DQVSWNA 475

Query: 551 VINS 554
           +I +
Sbjct: 476 MITA 479


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 394/709 (55%), Gaps = 42/709 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKE 133
           +LL  C    T   L  +HA +IK G ++     + L++ +C +      L  A  VF+ 
Sbjct: 7   SLLHNCK---TLQSLRIIHAQMIKTGLHNTNYALSRLLE-FCILSPNFDGLPYAISVFET 62

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           + + + + +N +  G A       AIKL+V M  LG  P+ +TF   L +   L     G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122

Query: 194 RQVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVVE----------- 227
           +Q+H  V+K  +  +++V  +L+ +Y               S H  VV            
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182

Query: 228 -----ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
                A+K+F E+P  D VS+N +I+ YA     KE+L LF+E+  T     +    T++
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S  A    +Q+GRQ+H+        S +K+ N+L+D+Y+KCG  E A  +F  LS+   +
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVI 302

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W  MI  Y      +EAL LF EM R+  + +  T  SIL A A+L ++  G+ +H ++
Sbjct: 303 SWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYI 362

Query: 403 IR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            +   G  +     ++L+DMYAK G ++ A Q F  M  R + + NA+I   A +G A A
Sbjct: 363 DKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANA 422

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
               F  M ++G +PD ++ + +LSACSH G+++ G + F SMTQ YK+ PK EHY  M+
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMI 482

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L   G F EAE+++  M  EPD ++W S++ +C++H N+E  +  A +L K+E   + 
Sbjct: 483 DLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEP-ENP 541

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV +SNIYA AG+W  V+ ++  + ++G++KV   S +E+ S VH F   D+ HP+  
Sbjct: 542 GSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 601

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKL 661

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 220/501 (43%), Gaps = 37/501 (7%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L  A  +F ++ +   + W  +  G++  +    A KL+V M    G  P+  TF  LL 
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCM-ISLGLLPNSYTFPFLLK 111

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
            C++   + E  Q+H  ++K GY   L +  SL+  Y K      A +VF     +D VS
Sbjct: 112 SCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVS 171

Query: 142 FNALITGFAKEGL-------------------------------NEEAIKLFVEMQHLGF 170
           + ALITG+A  G                                N+EA+ LF EM     
Sbjct: 172 YTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNV 231

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           KP + T    +SA      I LGRQVH+++       N+ + NAL+DLYSK   V  A  
Sbjct: 232 KPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACG 291

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           LF  +   D +S+N MI  Y     YKE+L LF+E+  +  + +     ++L   A    
Sbjct: 292 LFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351

Query: 291 LQIGRQIHT--QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
           +  GR IH      +    +   +  SL+DMYAKCG  E A ++F ++ H +     AMI
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGF 407
             +   G    A ++F  M +  I  D  TF  +L A +    L LG+++  S       
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKI 471

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFE 466
              +     ++D+    G  K+A +    M  E + V W +L+ AC  +G+ +      +
Sbjct: 472 TPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQ 531

Query: 467 DMVQ-SGYQPDSVSLLSVLSA 486
            +++     P S  LLS + A
Sbjct: 532 KLIKIEPENPGSYVLLSNIYA 552



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 176/360 (48%), Gaps = 5/360 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G + +A+++F+ +  +  VSW  +I GY+     +EA  LF +
Sbjct: 166 HRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKE 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T++S C++  +     QVH+ I   G  S L I N+L+D Y K  
Sbjct: 226 MMKTN-VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCG 284

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD +S+N +I G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 285 EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILP 344

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I  GR +H ++ K          +  +L+D+Y+K   +  A ++F  M     
Sbjct: 345 ACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTL 404

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            + N MI  +A + +   +  +F  ++    +     F  LLS  ++   L +GR+I   
Sbjct: 405 SACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRS 464

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 I+ +++    ++D+    G F+EA+E+   ++     V W +++ A    GN+E
Sbjct: 465 MTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVE 524



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 41/333 (12%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE---AKEIFANLSH 338
           LS++ N   LQ  R IH Q I T   +     + L++       F+    A  +F  +  
Sbjct: 6   LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + + W  M   +    +   A+ L++ M    +  +  TF  +L++ A+L     G+Q+
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT------------------------- 433
           H  V++ G+  +++  ++L+ MY K+G  KDA +                          
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185

Query: 434 ------FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                 F E+P +++VSWNA+IS  A  G+ +  L  F++M+++  +PD  ++++V+SAC
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +  G I+ G Q  +S    + L    +   +++D+  + G  + A  L   +    D I 
Sbjct: 246 AQSGSIQLGRQ-VHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS-NKDVIS 303

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           W+++I     H NL    K A  LF+ E LR  
Sbjct: 304 WNTMIGG-YTHLNL---YKEALLLFQ-EMLRSG 331


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/658 (35%), Positives = 382/658 (58%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y ++G+L+ A+ LF+++  + +V W +++ GY +      A K+F++MR      P
Sbjct: 99  LIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE-IKP 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA +LS C+     +   Q+H   +  G      + N+L+  Y K +CL  AR++F
Sbjct: 158 NSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLF 217

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +PQ D VS+N +I+G+ + GL  EA  LF  M   G KP   TFA+ L     L  + 
Sbjct: 218 DTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLK 277

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             +++H ++++   V +VF+ +AL+D+Y K   V  A+K   +    D V    MI+ Y 
Sbjct: 278 HCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYV 337

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N + KE+L+ FR L   R   +   FS++    A    L +G+++H   I T    +  
Sbjct: 338 LNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCH 397

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++++DMYAKCGR + A  +F  ++    + W +MI++  Q G   EA+NLF +M    
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + +  L A A L +L  GK++H  +I+    S++++ S+L+DMYAK G+L  + 
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSR 517

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M E+N VSWN++ISA   +GD +  L  F +M+++G QPD V+ L ++SAC H G
Sbjct: 518 RVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAG 577

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EG++Y++ MT++Y +  + EHYA + D+  R+G   EA + +  MPF PD  +W ++
Sbjct: 578 QVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTL 637

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C IH N+E A+ A+  LF ++ L ++  YV ++N+ A AG+W  V +V+  M+ERGV
Sbjct: 638 LGACHIHGNVELAEVASKHLFDLDPL-NSGYYVLLANVQAGAGKWRKVLKVRSIMKERGV 696

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           RKV  YSW+E+ +  H+F A D  HP T +I   +++L+ E+KKEGY P     +H +
Sbjct: 697 RKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYLPMHPQ 754



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 294/580 (50%), Gaps = 3/580 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YV++G+L  A+ LF ++      +W  +I G++   QF  A   ++ M    G  PD  T
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKM-LGAGVSPDKYT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  ++  C    +      VH  +   G    + + +SL+  Y +   L  A+ +F  +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           QKDSV +N ++ G+ K G +  AIK+F+EM+H   KP+  TFA  LS     A + LG Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   V      +  VAN LL +YSK  C+  ARKLF  +P+ D VS+N +I+ Y  N  
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             E+  LFR +           F++ L  V   L L+  ++IH   I    + +V + ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y KC   E A++     S   TV  T MIS YV  G  +EAL  F  + +  +   
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             TF+SI  A A LA+L+LGK+LH  +I++        GSA+LDMYAK G L  A + F 
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            + E++ + WN++I++C+QNG     +  F  M   G + D VS+   LSAC++   +  
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G +    M  K  LR      +S++D+  + G  + + ++  +M  E +E+ W+S+I++ 
Sbjct: 481 GKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNSIISAY 538

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
             H +L+       ++ +     D   ++ + +    AGQ
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQ 578



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 242/473 (51%), Gaps = 12/473 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K   L  AR+LF+++     VSW  +I GY Q     EA  LF  M    G 
Sbjct: 198 NTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM-ISAGI 256

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TFA+ L   +E  +     ++H  II+      + + ++L+D Y K R +++A++
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQK 316

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
              +    D+V    +I+G+   G N+EA++ F  +     KP+  TF++   A  GLA 
Sbjct: 317 NLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAA 376

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+++H  ++KT   E   V +A+LD+Y+K   +  A ++F  + E D + +N MIT 
Sbjct: 377 LNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITS 436

Query: 250 YAWNEQYKESLKLFRE--LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            + N +  E++ LFR+  ++ TR+D      S  LS  AN   L  G++IH   I     
Sbjct: 437 CSQNGRPGEAINLFRQMGMEGTRYD--CVSISGALSACANLPALHYGKEIHGLMIKGPLR 494

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++   +SL+DMYAKCG    ++ +F  +   + V W ++ISAY   G+L+E L LF EM
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEM 554

Query: 368 CRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            R  I  D  TF  I+ A      +  G +  H      G  + +   + + DM+ ++G 
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ----ATLKSFE-DMVQSGY 473
           L +A +T   MP   +   W  L+ AC  +G+ +    A+   F+ D + SGY
Sbjct: 615 LHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGY 667



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 2/236 (0%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY + G  ++AK +F  L    T  W  MI  +   G    AL  +++M  A +S D+ T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F  +++A   L S+ +GK +H  V   G   +VF GS+L+ +YA++G L DA   F  +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
           +++ V WN +++   +NGD+   +K F +M  S  +P+SV+   VLS C+   +++ G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             + +     L        +++ +  +  C   A KL   +P + D + W+ +I+ 
Sbjct: 181 -LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP-QSDLVSWNGIISG 234


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/739 (33%), Positives = 398/739 (53%), Gaps = 7/739 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S  V+ G    A  +F  M +R   SW +++GGY +     EA  L+  M    G 
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW-AGV 185

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          +VHA +++FG+   + + N+L+  Y K   +  AR+
Sbjct: 186 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARK 245

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M   D +S+NA+I G  + G     ++LF+ M H   +P+  T  +   A   L+D
Sbjct: 246 VFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSD 305

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +++H   VK  F  +V   N+L+ +Y+    + +AR +F  M   D +++  MI+ 
Sbjct: 306 VTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISG 365

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    ++L+++  ++           ++ L+  A    L +G ++H        IS 
Sbjct: 366 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISY 425

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V N++++MYAK  R ++A E+F  +     V W++MI+ +       EAL  F  M  
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML- 484

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A++  +  TF + L A A   +L  GK++H+ V+R G     +  +AL+D+Y K G    
Sbjct: 485 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F     +++VSWN +I+    +G     L  F  MV+ G  PD V+ +++L ACS 
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ EG + F+SMT+KY + P  +HYA MVD+L R+G   EA   + +MP  PD  +W 
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N CRIH+++E  + AA  +  +E   DA  +V + ++YA A  W+ +++V+K MRE+
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEP-NDAGYHVLLCDLYADACLWDKLARVRKTMREK 723

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP-DTSCALHD 668
           G+   +  SWVE+K  VH F  +DE HPQ  EI   +E + + MK  GY P ++ C    
Sbjct: 724 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHCP--- 780

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           EDE +K +    HSERLA+AF LINT  G+ I V KN   C  CH  +K+IS I  R+I 
Sbjct: 781 EDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDII 840

Query: 729 VRDSSRFHHFKDGFCSCRD 747
           VRDS + HHFKDG CSC D
Sbjct: 841 VRDSKQLHHFKDGSCSCGD 859



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 177/353 (50%), Gaps = 3/353 (0%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NA+L +  +      A ++F +MPE D  S+NVM+  Y  +    E+L L+  + +  
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                + F  +L       D ++GR++H   +      EV V N+L+ MYAKCG    A+
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F +++ +  + W AMI+ + + G     L LF+ M    +  +  T  S+  AS  L+
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            ++  K++H   ++ GF  +V   ++L+ MYA  G ++ A   F  M  R+ ++W A+IS
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
              +NG     L+ +  M  +   PD +++ S L+AC+  G ++ G++  + + +     
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHELAESKGFI 423

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHKNLE 562
                  +++++  +S   D+A ++   M  E D + WSS+I   C  H+N E
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCM-HEKDVVSWSSMIAGFCFNHRNFE 475



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 95/177 (53%)

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+++ M  + G    A  +FA +       W  M+  Y + G L+EAL+L+  M  
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +  D  TF  +LR+   +    +G+++H+ V+R GF   V   +AL+ MYAK G +  
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           A + F  M   + +SWNA+I+   +NG+  A L+ F  M+    QP+ +++ SV  A
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA 299



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 3/231 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V TN ++  Y KS  +  A E+F  M ++  VSW+ +I G+   ++  EA   F  M  D
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 486

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
               P+ VTF   L+ C+         ++HA +++ G      + N+L+D Y K      
Sbjct: 487 --VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A   F     KD VS+N +I GF   G  + A+  F +M  +G  P + TF A L A   
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604

Query: 187 LADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
              ++ G ++ H+   K + V N+     ++DL S+   + EA     EMP
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMP 655


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/793 (32%), Positives = 403/793 (50%), Gaps = 90/793 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATAR-----------------ELFNSMVDRTAVSWTILIGGY 47
           N + + M+++G++ S   A +R                 ++F+ + +     W  ++  Y
Sbjct: 58  NRILSQMILTGFI-SDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAY 116

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
            Q N   +A  L+  +       PD  T+  ++  C+         ++H  ++K G++S 
Sbjct: 117 IQSNSAEKALLLY-KLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSD 175

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           + + N+L++ Y     +  AR++F E P  DSVS+N+++ G+ K+G  EEA  +F +M  
Sbjct: 176 VYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ 235

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
                                                   N+  +N+++ L  K   V+E
Sbjct: 236 ---------------------------------------RNIVASNSMIVLLGKMGQVME 256

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A KLF EM E D VS++ +I+ Y  N  Y+E+L +F E+        +    ++LS  A+
Sbjct: 257 AWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAH 316

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA-------------------------- 321
              ++ G+ IH   I     S V + N+L+ MY+                          
Sbjct: 317 LSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSM 376

Query: 322 -----KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
                KCG  E+A+ +F  +     V W+A+IS Y Q     E L LF EM    I  D+
Sbjct: 377 ISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDE 436

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
               S++ A   LA+L  GK +H+++ ++G   NV  G+ LLDMY K G +++A++ F  
Sbjct: 437 TILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNG 496

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M E+ + SWNALI   A NG  + +L  F +M  +G  P+ ++ + VL AC H GL++EG
Sbjct: 497 MEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG 556

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
             +F SM +K+ + P  +HY  MVD+L R+G  +EAEKL+  MP  PD   W +++ +C+
Sbjct: 557 RCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACK 616

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
            H + E  ++   +L +++   D   +V +SNI+A  G WE V +V+  M+++GV K   
Sbjct: 617 KHGDTEMGERVGRKLIELQPDHDGF-HVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPG 675

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            S +E    VH F A D+ HP  N++   +  + + +K EGY PDT+    D DEE K  
Sbjct: 676 CSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKET 735

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
           +L  HSE+LAIAF L+     +PI +MKNLR C DCH A KLISK   REI VRD  RFH
Sbjct: 736 TLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFH 795

Query: 737 HFKDGFCSCRDFW 749
           +FK+G CSC D+W
Sbjct: 796 YFKEGACSCMDYW 808



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 181/391 (46%), Gaps = 34/391 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N V++N +I    K G +  A +LFN M ++  VSW+ LI GY Q   + EA  +F
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           ++M  + G   D V   ++LS C+          +H  +I+ G  S + + N+L+  Y  
Sbjct: 293 IEMNAN-GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG 351

Query: 121 -----------------------------IRC--LDLARRVFKEMPQKDSVSFNALITGF 149
                                        ++C  ++ AR +F  MP+KD VS++A+I+G+
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+     E + LF EMQ    +P +    + +SA   LA +  G+ VHA++ K     NV
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNV 471

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            +   LLD+Y K  CV  A ++F  M E    S+N +I   A N   + SL +F E++  
Sbjct: 472 ILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNN 531

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEE 328
               ++  F  +L    +   +  GR      I    I   VK    +VD+  + G   E
Sbjct: 532 GVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNE 591

Query: 329 AKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           A+++  ++     V  W A++ A  + G+ E
Sbjct: 592 AEKLIESMPMAPDVATWGALLGACKKHGDTE 622



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 10/322 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N + +S N +ISG +K G++  AR LF+ M ++  VSW+ +I GY+Q + F E   LF +
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+  G   PD     +++S C+     ++   VHA I K G    +I+  +L+D Y K  
Sbjct: 427 MQL-GQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCG 485

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C++ A  VF  M +K   S+NALI G A  GL E ++ +F EM++ G  P++ TF   L 
Sbjct: 486 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 545

Query: 183 AGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEV-DG 240
           A   +  +  GR   A +++ + +E NV     ++DL  +   + EA KL   MP   D 
Sbjct: 546 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 605

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS-VVANKLD----LQIGR 295
            ++  ++     +   +   ++ R+L   + D     F  LLS + A+K D    L++  
Sbjct: 606 ATWGALLGACKKHGDTEMGERVGRKLIELQPDHDG--FHVLLSNIFASKGDWEDVLEVRG 663

Query: 296 QIHTQTIVTTAISEVKVANSLV 317
            +  Q +V T    +  AN +V
Sbjct: 664 MMKQQGVVKTPGCSLIEANGVV 685


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/588 (37%), Positives = 358/588 (60%), Gaps = 3/588 (0%)

Query: 163 VEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
           +++ H G   P+   + + ++A     ++A  R +HA + ++    + F+ N+L+ +Y K
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
              V +AR +F +MP  D VS+  +I  YA N    E++ L  ++   RF  + F F++L
Sbjct: 108 CGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSL 167

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L          IG Q+H   +      +V V ++L+DMYA+C + + A  +F  L   + 
Sbjct: 168 LKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNE 227

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V W A+I+ + +K + E  L  F EM R    A   T++S+  A A + +L  G+ +H+ 
Sbjct: 228 VSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAH 287

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +I+SG     F G+ +L MYAKSGS+ DA + F  M +R++V+WN +++A AQ G  +  
Sbjct: 288 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 347

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           +  FE++ + G Q + ++ LSVL+ACSH GL++EG  YF+ M + Y ++P+ +HY S VD
Sbjct: 348 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVD 406

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +L R+G   EA   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D  
Sbjct: 407 LLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP-DDTG 465

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
           P V + NIYA  G+W   ++V+K M+  GV+K  A SWV++++ VH+F A+D+ HP++ +
Sbjct: 466 PPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGD 525

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           I R  E +   +KK GY P+T+  L   +E+ +   LKYHSE++A+AFALIN P G+ I 
Sbjct: 526 IYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIR 585

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +MKN+R C DCH+A K +SK+  REI VRD++RFHHF +G CSC D+W
Sbjct: 586 IMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G   P    + ++++ C++         +HA + +        + NSL+  YCK
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF +MP +D VS+  LI G+A+  +  EAI L  +M    F+P+ FTF + 
Sbjct: 108 CGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSL 167

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A       ++G Q+HA  VK N+ E+V+V +ALLD+Y++ + +  A  +F  +   + 
Sbjct: 168 LKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNE 227

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  +A     + +L  F E+Q   F  + F +S++ S  A    L+ GR +H  
Sbjct: 228 VSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAH 287

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +       V N+++ MYAK G   +A+++F  +     V W  M++A  Q G  +EA
Sbjct: 288 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 347

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +  F E+ +  I  +Q TF S+L A +    +  GK     +        +    + +D+
Sbjct: 348 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDL 407

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G LK+A+    +MP E     W AL+ AC  + +A+
Sbjct: 408 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 447



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G ++ AR +F+ M  R  VSWT LI GY+Q     EA  L  DM      
Sbjct: 99  NSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDM-LRARF 157

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF +LL         +   Q+HA  +K+ ++  + + ++L+D Y +   +D+A  
Sbjct: 158 RPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIM 217

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  K+ VS+NALI GFA++   E  +  F EMQ  GF  + FT+++  SA   +  
Sbjct: 218 VFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGA 277

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR VHA ++K+      FV N +L +Y+K   +V+ARK+F  M + D V++N M+T 
Sbjct: 278 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 337

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A     KE++  F E++      +Q  F ++L+  ++   ++ G+             E
Sbjct: 338 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPE 397

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           +    S VD+  + G  +EA   +F      +   W A++ A
Sbjct: 398 IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/777 (33%), Positives = 417/777 (53%), Gaps = 39/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y+K G +  A ++F+ +     VS+T LI G+S+ +   EA +LF  M  D G 
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM-LDSGI 192

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+  TF  +L+ C          QVH  ++K G  S + ICN+L+  YCK   LDL  R
Sbjct: 193 EPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLR 252

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLA 188
           +F+EMP++D  S+N +I+   KE   +EA   F  MQ   G K   F+ +  L+A  G  
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSK----------------HDCVV------ 226
               G+Q+HA  +K     ++ V+++L+  Y+K                 D +       
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 227 ---------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                     A ++F +MP+ + +SYN ++   + N+    +L+LF E+     + S   
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF--AN 335
            +++++        ++ +QI    +    +S   +  +LVDMY +CGR E+A++IF   +
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIE-MCRANISADQATFASILRASAELASLSL 394
           L +  T   T+MI  Y + G L EA++LF        I  D+    SIL     +    +
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GKQ+H   ++SG ++    G+A + MY+K  ++ DA++ F  M  ++IVSWN L++    
Sbjct: 553 GKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVL 612

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC--GLIEEGLQYFNSMTQKYKLRPK 512
           +      L  ++ M ++G +PDS++   ++SA  H    L++     F SM  ++ ++P 
Sbjct: 613 HWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPT 672

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHYAS + +L R G  +EAE+ +  MP EPD  +W +++NSCRI+KN    K AA  + 
Sbjct: 673 LEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNIL 732

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            +E  +D   Y+  SN+Y+ +G+W    +V++ MRE+G RK  + SW+  ++K+H F A 
Sbjct: 733 AVEP-KDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYAR 791

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HPQ  +I   +E L+ E  K GY PDTS  L + +E  K E L YHS +LA  F ++
Sbjct: 792 DRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGIL 851

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T  G PI ++KN+R C DCH  +K +S +T R+I +RD+S FH F DG CSC D+W
Sbjct: 852 MTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 170/360 (47%), Gaps = 14/360 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++   +I+ Y++ G L +A E+FN M  R  +S+  ++ G S+ +    A +LF
Sbjct: 359 MPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELF 418

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           ++M  +G    D  T  ++++ C    +     Q+   ++KFG  S   I  +LVD Y +
Sbjct: 419 IEMLEEGVEISD-CTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTR 477

Query: 121 IRCLDLARRVF--KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
              ++ A ++F  + +    +    ++I G+A+ G   EAI LF   Q  G    D   +
Sbjct: 478 CGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMS 537

Query: 179 A---ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               +L   +G  +  +G+Q+H   +K+  +    V NA + +YSK   + +A ++F  M
Sbjct: 538 TSILSLCGSIGFHE--MGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTM 595

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VS+N ++  +  + Q  ++L ++++++          F+ ++S   +  +L +  
Sbjct: 596 NMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHT-ELNLVD 654

Query: 296 QIHTQTIVTTAISEVKVA----NSLVDMYAKCGRFEEAKEIFANLSHISTV-PWTAMISA 350
              +  +       +K       S + +  + G  EEA++   N+     V  W A++++
Sbjct: 655 SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/548 (39%), Positives = 355/548 (64%), Gaps = 2/548 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VHA ++++ F  ++ + N LL++Y+K   + EARK+F +MP+ D V++  +I+ Y+ 
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           +++  ++L  F ++    +  ++F  S+++   A +     G Q+H   +     S V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            ++L+D+Y + G  ++A+ +F  L   + V W A+I+ + ++   E+AL LF  M R   
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
                ++AS+  A +    L  GK +H+++I+SG     F+G+ LLDMYAKSGS+ DA +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  + +R++VSWN+L++A AQ+G  +  +  FE+M + G +P+ +S LSVL+ACSH GL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           ++EG  Y+  M +K  + P+  HY ++VD+L R+G  + A + + +MP EP   +W +++
Sbjct: 379 LDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           N+CR+HKN E    AA+ +F+++   D  P+V + NIYA  G+W   ++V+K M+E GV+
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDP-DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K  A SWVE+++ +H+F ANDE HPQ  EI RK E ++ ++K+ GY PDTS  +   D++
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 556

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            +  +L+YHSE++A+AFAL+NTP GS I + KN+R C DCH AIKL SK+ GREI VRD+
Sbjct: 557 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDT 616

Query: 733 SRFHHFKD 740
           +RFHHFKD
Sbjct: 617 NRFHHFKD 624



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 210/388 (54%), Gaps = 7/388 (1%)

Query: 76  FATLLSGCSEPDTANELIQ---VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           + TLL  C+       LIQ   VHA I++  +   +++ N+L++ Y K   L+ AR+VF+
Sbjct: 63  YNTLLKKCT---VFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           +MPQ+D V++  LI+G+++     +A+  F +M   G+ P++FT ++ + A         
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+H F VK  F  NV V +ALLDLY+++  + +A+ +F  +   + VS+N +I  +A 
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
               +++L+LF+ +    F  S F +++L    ++   L+ G+ +H   I +        
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            N+L+DMYAK G   +A++IF  L+    V W ++++AY Q G  +EA+  F EM R  I
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             ++ +F S+L A +    L  G   +  + + G +   +    ++D+  ++G L  A++
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419

Query: 433 TFKEMP-ERNIVSWNALISACAQNGDAQ 459
             +EMP E     W AL++AC  + + +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 2/356 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + V  N L++ Y K G+L  AR++F  M  R  V+WT LI GYSQ ++  +A  LF + 
Sbjct: 93  HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL-LFFNQ 151

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  P+  T ++++   +         Q+H   +K G++S + + ++L+D Y +   
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A+ VF  +  ++ VS+NALI G A+    E+A++LF  M   GF+PS F++A+   A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+ VHA+++K+      F  N LLD+Y+K   + +ARK+F  + + D VS+
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++T YA +   KE++  F E++      ++  F ++L+  ++   L  G   +     
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
              + E     ++VD+  + G    A      +    T   W A+++A     N E
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I AD+  + ++L+       L  G+ +H+ +++S F  ++  G+ LL+MYAK GSL++A 
Sbjct: 56  IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH-- 489
           + F++MP+R+ V+W  LIS  +Q+      L  F  M++ GY P+  +L SV+ A +   
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175

Query: 490 ---CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
              CG         +    K          ++++D+  R G  D+A+ +   +    D +
Sbjct: 176 RGCCG------HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-V 228

Query: 547 MWSSVI 552
            W+++I
Sbjct: 229 SWNALI 234


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/742 (33%), Positives = 401/742 (54%), Gaps = 16/742 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y   G ++ A +LF+ M +R  VSW  +I             ++F D   DG  
Sbjct: 226 NALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI-------------RVFSDNGDDGAF 272

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T  T+L  C+          VH   +K   +  L++ N+L+D Y K  C+  ++ 
Sbjct: 273 MPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQM 332

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGL 187
           +FK    K+ VS+N ++ GF+ EG       L  +M       K  + T   A+      
Sbjct: 333 IFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDE 392

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           + +   +++H + +K  FV +  +ANA +  Y+K   +  A+++F  +      S+N +I
Sbjct: 393 SVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALI 452

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA +   + SL    +++ +      F   +LLS  +    L++G+++H   I     
Sbjct: 453 GGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 512

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++ V  S++ +Y  CG     + +F  +   S V W  +I+ ++Q G  E AL LF +M
Sbjct: 513 RDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQM 572

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I     +  ++  A + L SL LG++ H++ ++     N F   +++DMYAK+G++
Sbjct: 573 VLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAI 632

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             + + F  + E++  SWNA+I     +G A+  +K FE+M ++G  PD ++ L VL+AC
Sbjct: 633 TQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTAC 692

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +H GL+ EGL+Y + M   + L+P  +HYA ++D+L R+G  D A ++ A+M  EPD  +
Sbjct: 693 NHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGI 752

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W+S+++ CRIH+NLE  +K A +LF +E       YV +SN+YA  G+W+ V QV++ M+
Sbjct: 753 WNSLLSWCRIHQNLEMGEKVAAKLFVLEP-EKPENYVLLSNLYAGLGKWDDVRQVRQRMK 811

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           E  +RK    SW+EL  KV  F   +       EI+     L  ++ K GY+PDTS   H
Sbjct: 812 EMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQH 871

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D  EE K+E L+ HSE+LAI + LI T EG+ + V KNLR C DCH A KLISK+  REI
Sbjct: 872 DLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREI 931

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD+ RFHHF  GFCSC D+W
Sbjct: 932 VVRDNKRFHHFNKGFCSCGDYW 953



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 275/602 (45%), Gaps = 90/602 (14%)

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--- 165
           ++C  ++  Y      D +R  F  +  K+   +NA+I+ +++  L  E +++F++M   
Sbjct: 121 VLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISK 180

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
            HL   P +FTF   + A  G++D+ +G  VH  VVKT  VE++FV NAL+  Y  H  V
Sbjct: 181 THL--LPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP----FSTL 281
            +A KLF  MPE + VS+N MI  ++ N                  D +  P      T+
Sbjct: 239 SDALKLFDIMPERNLVSWNSMIRVFSDNGD----------------DGAFMPDVATVVTV 282

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L V A + ++ +G+ +H   +  +   E+ V N+L+DMY+K G   +++ IF   ++ + 
Sbjct: 283 LPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNV 342

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRA--NISADQATFASILRASAELASLSLGKQLH 399
           V W  M+  +  +G++    +L  +M     ++ AD+ T  + +    + + L   K+LH
Sbjct: 343 VSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELH 402

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
            + ++  F+ +    +A +  YAK GSL  A + F  +  + + SWNALI   AQ+ D +
Sbjct: 403 CYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPR 462

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACS------------------------------- 488
            +L +   M  SG  PD+ ++ S+LSACS                               
Sbjct: 463 LSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 522

Query: 489 ----HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM---PF 541
               HCG +      F++M     +      + +++    ++G  + A  L  QM     
Sbjct: 523 SLYIHCGELCTVQVLFDAMEDNSLVS-----WNTVITGHLQNGFPERALGLFRQMVLYGI 577

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS--NIYAVAGQWESV 599
           +P  I   +V  +C +  +L   ++A    + ++ L +   ++A S  ++YA  G     
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREA--HAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           S+V   ++E+     +A SW       +       +H +  E  +    L +EM++ G  
Sbjct: 636 SKVFNGLKEK-----SAASW-------NAMIMGYGMHGRAKEAIK----LFEEMQRTGRN 679

Query: 660 PD 661
           PD
Sbjct: 680 PD 681



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 229/491 (46%), Gaps = 10/491 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  V  N L+  Y K G +  ++ +F    ++  VSW  ++GG+S +      F L   
Sbjct: 308 DKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQ 367

Query: 63  MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
           M   G  D   D VT    +  C +      L ++H   +K  F Y+ +L   N+ V SY
Sbjct: 368 MLA-GSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELL--ANAFVASY 424

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   L  A+RVF  +  K   S+NALI G+A+      ++   ++M++ G  P +FT  
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVC 484

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + LSA   L  + LG++VH F+++     ++FV  ++L LY     +   + LF  M + 
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             VS+N +IT +  N   + +L LFR++             T+    +    L++GR+ H
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +         +A S++DMYAK G   ++ ++F  L   S   W AMI  Y   G  +
Sbjct: 605 AYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAK 664

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
           EA+ LF EM R   + D  TF  +L A      L  G + L       G   N+   + +
Sbjct: 665 EAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV 724

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDM-VQSGYQP 475
           +DM  ++G L +A++   EM E   V  WN+L+S C  + + +   K    + V    +P
Sbjct: 725 IDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKP 784

Query: 476 DSVSLLSVLSA 486
           ++  LLS L A
Sbjct: 785 ENYVLLSNLYA 795



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 145/276 (52%), Gaps = 16/276 (5%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           LL     + D+++GR+IH     +T + S+  +   ++ MYA CG  ++++  F  L   
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMC-RANISADQATFASILRASAELASLSLGKQL 398
           +   W A+IS+Y +     E L +FI+M  + ++  D  TF  +++A A ++ + +G  +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  V+++G + ++F G+AL+  Y   G + DA++ F  MPERN+VSWN++I   + NGD 
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
            A            + PD  ++++VL  C+    I  G +  +    K  L  +     +
Sbjct: 270 GA------------FMPDVATVVTVLPVCAREREIGVG-KGVHGWAVKLSLDKELVVNNA 316

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           ++D+  + GC  +++ ++ ++    + + W++++  
Sbjct: 317 LMDMYSKWGCIIDSQ-MIFKLNNNKNVVSWNTMVGG 351


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/556 (39%), Positives = 345/556 (62%), Gaps = 1/556 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +QVHA V  T  + ++ VAN LL + +KH  +V A  LF +M E D VS++VMI  +  N
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             Y+   + FREL         F    ++    + + L +GR IH+  +      +  V 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           ++LVDMYAKCG  + AK++F  +     V  T MI+ Y + G   E+  LF +M R    
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D+    +I+ A A+L +++  + +H +V    +  +V  G+A++DMYAK GS+  + + 
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M ++N++SW+A+I A   +G  +  L+ F  M+ SG  P+ ++ +S+L ACSH GL+
Sbjct: 260 FDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLV 319

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           ++GLQ F+ M+  Y +RP  +HY  MVD+L R+G  D+A +L+  M  E DE +W + + 
Sbjct: 320 DDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLG 379

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CRIH+ ++ A+KAA  L  ++  ++   Y+ +SNIYA AG+W+ V++++  M +R ++K
Sbjct: 380 ACRIHRQVDLAEKAAKLLLSLQT-QNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
           +  Y+W+E+ + ++ F A D  H ++NEI   +++L Q+++  GY PDT+  LHD DEE+
Sbjct: 439 IPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEV 498

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K+  L  HSE+LAIAF LI TP+G+PI + KNLR C DCH+  KL+S IT R+I VRD++
Sbjct: 499 KLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDAN 558

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK+G CSC D+W
Sbjct: 559 RFHHFKEGICSCGDYW 574



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 193/385 (50%), Gaps = 7/385 (1%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           DPD+  F + L  C       ++ QVHA +   G    LI+ N L+    K + L  A  
Sbjct: 2   DPDF--FISTLFKCR---NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHL 56

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M ++D VS++ +I GF K G  E   + F E+   G KP +F+    + A      
Sbjct: 57  LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +GR +H+ V+K     + FV + L+D+Y+K   +  A++LF  MP+ D V+  VMI  
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA   +  ES  LF +++   F   +    T+++  A    +   R +H          +
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V++  +++DMYAKCG  + ++EIF  +   + + W+AMI AY   G   EAL LF  M  
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFSGSALLDMYAKSGSLK 428
           + I  ++ TF S+L A +    +  G QL S + +  G   +V   + ++D+  ++G L 
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356

Query: 429 DAIQTFKEMP-ERNIVSWNALISAC 452
            A++  + M  E++   W A + AC
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGAC 381



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 234/489 (47%), Gaps = 41/489 (8%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            + +  N L+    K  +L TA  LFN M +R  VSW+++IGG+ +   +   F+ F ++
Sbjct: 33  HDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFREL 92

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQ--VHADIIKFGYNSILIICNSLVDSYCKI 121
               GS PD  +   ++  C   DT   ++   +H+ ++K G +    +C++LVD Y K 
Sbjct: 93  -IRAGSKPDNFSLPFVIKACR--DTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKC 149

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D A+++F  MP+KD V+   +I G+A+ G   E+  LF +M+  GF P        +
Sbjct: 150 GMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIV 209

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           +A   L  +   R VH +V    +  +V +  A++D+Y+K   +  +R++F  M + + +
Sbjct: 210 NACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVI 269

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S++ MI  Y ++ Q +E+L+LF  +  +    ++  F +LL   ++   +  G Q+ +  
Sbjct: 270 SWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLM 329

Query: 302 IVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            V+  +  +VK    +VD+  + GR ++A  +  N+               V+K   E  
Sbjct: 330 SVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENME--------------VEKD--EGI 373

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
              F+  CR +   D A      +A+  L SL      H  +     +SN+++ +     
Sbjct: 374 WCAFLGACRIHRQVDLAE-----KAAKLLLSLQTQNPGHYIL-----LSNIYANAGRWKD 423

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALI-------SACAQNGDAQATLKSFEDMVQS-G 472
            AK  +L  A +  K++P    +  + +I       ++  ++ +    LKS    ++S G
Sbjct: 424 VAKIRNLM-AKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAG 482

Query: 473 YQPDSVSLL 481
           Y PD+ S+L
Sbjct: 483 YVPDTNSVL 491


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/656 (35%), Positives = 388/656 (59%), Gaps = 9/656 (1%)

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           + FG++  L++ N L+  Y K   L +A  VF  M +++ VS+ AL+ G  + G   E++
Sbjct: 1   MGFGFD--LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESL 58

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            LF +M   G KP+DFTF+  L A   L  + +GRQ+H   VKT F     V N+++D+Y
Sbjct: 59  LLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMY 118

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   + EA  +F  MP  + +S+N MI  Y      +++L LF+++Q       +F F+
Sbjct: 119 SKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFT 178

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEIFANLS 337
           + L   ++   ++ G QIH   I    +  V   VA +L+D+Y KCG+   A+ +F+++ 
Sbjct: 179 STLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE 238

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               + WTA+I  Y Q+GNL E++ LF ++  ++I  D    +S++   A+ A +  GKQ
Sbjct: 239 EKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQ 298

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+F I+     ++   +++LDMY K G + +A + F EMP RN++SW  +I+   ++G 
Sbjct: 299 MHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGL 358

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  ++ F++M     +PD V+ L+VL  CSH GL+E+G +YF+ +   + ++ + EHYA
Sbjct: 359 GKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA 418

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            MVD+L R+G   EA+ L+  MP E +  +W +++++CR+H +LE  K+    L +++  
Sbjct: 419 CMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDS- 477

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            +   YV MSNIYA AG W+   ++++ ++ + ++K    SWVE+  +VH F   D+ HP
Sbjct: 478 ENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHP 537

Query: 638 QTNEIRRKIENLMQEMKKE-GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI--NT 694
            T +I   ++ + + MK+E GY      ALHD +EE K+++L+ HSE+LAI  AL+    
Sbjct: 538 LTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGL 597

Query: 695 PEGSPIL-VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            EG  ++ V KNLR C DCH  IK +SKI      VRD++RFH F+DG CSCRD+W
Sbjct: 598 EEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/455 (32%), Positives = 244/455 (53%), Gaps = 5/455 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI  Y K G L  A ++F+ M+ R  VSWT L+ G+ Q     E+  LF  M   G 
Sbjct: 10  SNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSG- 68

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF+T L  C   +  +   Q+H   +K G++ + ++ NS++D Y K   ++ A 
Sbjct: 69  VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAA 128

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F+ MP ++ +S+NA+I G+   G  E+A+ LF +MQ +G    +FTF + L A   L 
Sbjct: 129 CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLG 188

Query: 189 DIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            I  G Q+HAF++   F+   N  VA AL+DLY K   +  AR++F  + E   +S+  +
Sbjct: 189 AIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA      ES++LFR+L+ +      F  S+++ V A+   +Q G+Q+H   I   +
Sbjct: 249 ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS 308

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             ++ V NS++DMY KCG   EA+ +F+ +   + + WT MI+ Y + G  +EA+ LF E
Sbjct: 309 GVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDE 368

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSG 425
           M   +   D  T+ ++L   +    +  G++  S +    G  + V   + ++D+  ++G
Sbjct: 369 MQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAG 428

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            LK+A      MP E N+  W  L+SAC  +GD +
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLE 463



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 2/233 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT     LI  YVK G L  AR +F+ + ++  +SWT LI GY+Q+    E+ +LF  +R
Sbjct: 210 NTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLR 269

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +     D    ++++   ++     +  Q+HA  IK      + +CNS++D Y K   +
Sbjct: 270 -ESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMI 328

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + A R+F EMP ++ +S+  +ITG+ K GL +EAI+LF EMQ    +P D T+ A L   
Sbjct: 329 NEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGC 388

Query: 185 VGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
                +  G++  + +   + ++  V     ++DL  +   + EA+ L   MP
Sbjct: 389 SHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMP 441


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/739 (33%), Positives = 406/739 (54%), Gaps = 5/739 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y +   L  A + F++M  R  V+W+ ++  + Q  Q  E   +F  M ++   +P
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEA-VEP 199

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VT  ++   CSE  +      VH  +++    S   + NSL+  Y K+  L  A R+F
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + +P + +  +  +I+ + + G  +EA+ +F +MQ    +P+  T    L A   L  + 
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319

Query: 192 LGRQVHAFVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            GR VH FV++      + F+  AL++LY+    + +  K+F  + E   +S+N +I+ +
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N Q +E+L LF ++Q        +  ++ LS        Q+G QIH   I T   ++ 
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF 439

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V N+L+DMYAKCG    A ++F  +   S V W +MI  + Q G   EA+ LF +M   
Sbjct: 440 -VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 498

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D+ TF S+++A + L  L  GK +H  +I  G   + +  +AL DMY+K G L+ A
Sbjct: 499 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMA 558

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  M ER+IVSW+ +I+    +G   AT+  F  M+ SG +P+ ++ + +LSACSH 
Sbjct: 559 HGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHA 618

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G +EEG  YFNSM++ + + PK +H+A MVD+L R+G  + A +++  +PF  +  +W +
Sbjct: 619 GAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGA 677

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++N CRIHK ++  K     L  ++   D   Y  +SNIYA  G W+   +V+  M+ +G
Sbjct: 678 LLNGCRIHKRIDIIKSIEKNLLDVDT-ADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKG 736

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           +RKV  YS +E+  K++ F   D  H QT +I R +EN    +  + Y  +   ++    
Sbjct: 737 LRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTS 796

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           +  K  ++  HSE+LAIAF +INT  G+ + + KNLR C DCH+  K+ SKITGREI +R
Sbjct: 797 KFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMR 856

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D +RFH F++G CSC D+W
Sbjct: 857 DLNRFHCFRNGSCSCNDYW 875



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 294/605 (48%), Gaps = 4/605 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           ++  LI  Y + G   +++ +F++     +  W +LI  Y     F EA  L+ +M    
Sbjct: 35  ASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQD 94

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            +      F ++L  CS     +   +VH  +IK G+ S  ++  SL+  Y ++ CLD A
Sbjct: 95  QTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDA 154

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            + F  MP +D V++++++  F + G   E + +F +M     +P   T  +   A   L
Sbjct: 155 CKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSEL 214

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             + LGR VH +VV+     N  + N+L+ +Y K   +  A +LF  +P      +  MI
Sbjct: 215 GSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMI 274

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +CY  +  ++E+L +F ++Q  + + +Q     +L   A    ++ GR +H   I     
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMD 334

Query: 308 SEVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            E+  +  +L+++YA  G   +  ++F  +   + + W  +IS + + G  EEAL LF++
Sbjct: 335 PELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQ 394

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D  + AS L A   ++   LG Q+H ++I++G   N F  +AL+DMYAK G 
Sbjct: 395 MQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF-NDFVQNALIDMYAKCGF 453

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +  A + F+++ E+++V+WN++I   +QNG +   +  F+ M  +  + D ++ LSV+ A
Sbjct: 454 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 513

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH G +E+G ++ +     Y LR       ++ D+  + G    A  +  +M  E   +
Sbjct: 514 CSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIV 571

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            WS +I    +H  +       +Q+       +   ++ + +  + AG  E       +M
Sbjct: 572 SWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM 631

Query: 607 RERGV 611
            E GV
Sbjct: 632 SEFGV 636



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 177/614 (28%), Positives = 280/614 (45%), Gaps = 50/614 (8%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
           T+  L Q+HA +   G +        L++SY +I   + ++RVF   P+ DS  +  LI 
Sbjct: 13  TSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIK 72

Query: 148 GFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
            +   G  EEA+ L+ EM +    + S+F F + L A  G  D+++G +VH  V+K  F 
Sbjct: 73  CYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFE 132

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
            +  V  +LL +Y +  C+ +A K F  MP  D V+++ ++  +  N Q  E L +F ++
Sbjct: 133 SDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM 192

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
                +       ++    +    L++GR +H   +     S   + NSL+ MY K G  
Sbjct: 193 ISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDL 252

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
             A+ +F N+    T PWT MIS Y Q G  +EALN+F +M    +  +Q T   +L A 
Sbjct: 253 YSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCAC 312

Query: 387 AELASLSLGKQLHSFVIRSGFMSNV-FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           A L  +  G+ +H FVIR      + F G AL+++YA +G+L+D  + F+ + E+ I+SW
Sbjct: 313 ARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSW 372

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY------ 499
           N LIS   +NG  +  L  F  M   G  PDS SL S LSAC      + G Q       
Sbjct: 373 NTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432

Query: 500 ---FNSMTQKY-------------------KLRPKK-EHYASMVDILCRSGCFDEAEKLM 536
              FN   Q                     K++ K    + SM+    ++G   EA  L 
Sbjct: 433 TGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 492

Query: 537 AQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
            QM     + D++ + SVI +C     LE  K    +L      +D+    A++++Y+  
Sbjct: 493 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 552

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+ +    V   M ER +      SW        V  A   +H Q N       +L  +M
Sbjct: 553 GELQMAHGVFDRMSERSI-----VSW-------SVMIAGYGMHGQINATI----SLFNQM 596

Query: 654 KKEGYKPDTSCALH 667
              G KP+    +H
Sbjct: 597 LGSGIKPNDITFMH 610



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N    N LI  Y K G + +A ++F  + +++ V+W  +I G+SQ     EA  LF  
Sbjct: 435 NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQ 494

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +     D +TF +++  CS      +   VH  +I +G      +  +L D Y K  
Sbjct: 495 MYMN-CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCG 553

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L +A  VF  M ++  VS++ +I G+   G     I LF +M   G KP+D TF   LS
Sbjct: 554 ELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILS 613

Query: 183 A 183
           A
Sbjct: 614 A 614


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 264/815 (32%), Positives = 424/815 (52%), Gaps = 68/815 (8%)

Query: 1   MPNQNTVSTNMLISG----YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA 56
           +P+ + VS   L +G    Y+  G  + A  +   +V   AV W +L+  + ++ +   A
Sbjct: 74  LPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRA 133

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +   M    G+ PD+ T    L  C E  +       H  I   G+ S + +CN+LV 
Sbjct: 134 IGVSCRM-LRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVA 192

Query: 117 SYCKIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
            Y +   L+ A  VF E+ +K   D +S+N+++    K      A+ LF EM  +  + +
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKA 252

Query: 174 D------FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
                   +    L A   L  +   +++H++ ++     + FV NAL+D Y+K   + +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKD 312

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS-------- 279
           A  +F  M   D VS+N M+T Y  + ++  + +LF+ ++          +S        
Sbjct: 313 AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372

Query: 280 ---------------------------TLLSVVANKLDLQIGRQIHTQTIVTTAIS---- 308
                                      +LLS  A+   L  G + H  ++    +S    
Sbjct: 373 RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432

Query: 309 --------EVKVANSLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQKGNLE 358
                   ++ V N+L+DMY+KC  F+ A+ IF ++     + V WT MI  Y Q G+  
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492

Query: 359 EALNLFIEMCRAN--ISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMSNV-FSG 414
           +AL LF EM      ++ +  T + IL A A L+SL +GKQ+H++V R   + S+V F  
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           + L+DMY+K G +  A   F  MP+RN VSW +++S    +G  +  L  F+ M ++G+ 
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV 612

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD +S L +L ACSH G++++GL YF+ M   Y +    +HYA ++D+L RSG  D+A K
Sbjct: 613 PDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWK 672

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +MP EP   +W +++++CR+H N+E A+ A ++L  M+   D + Y  +SNIYA A 
Sbjct: 673 TIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGS-YTLISNIYATAR 731

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W+ V+++++ M++ G++K    SWV+ K     F   D  HP + EI   +E L+  +K
Sbjct: 732 RWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
             GY P+T+ ALHD D+E K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+
Sbjct: 792 VMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHS 851

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A   ISKI   EI VRDSSRFHHFK+G CSC  +W
Sbjct: 852 AFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 255/590 (43%), Gaps = 88/590 (14%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG--------------------YNSI 107
           G D     FA+LL  C    + N + Q+H  II +G                    Y S 
Sbjct: 26  GRDVSPTHFASLLKECR---SVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSP 82

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
             +   +V SY        A  V + +    +V +N L+    +EG  + AI +   M  
Sbjct: 83  KSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLR 142

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G KP  FT   AL A   L     G   H  +    F  NVFV NAL+ +YS+   + +
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLED 202

Query: 228 ARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           A  +F E+      D +S+N ++  +      + +L LF E+     +++    S ++S+
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISI 262

Query: 285 V------ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           V      A+   L   ++IH+  I     ++  V N+L+D YAKCG  ++A  +F  +  
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA------------------ 380
              V W AM++ Y Q G    A  LF  M + NI  D  T++                  
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 381 -----------------SILRASAELASLSLGKQLHSFVIRSGFMS------------NV 411
                            S+L A A L +LS G + H++ ++   +S            ++
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
              +AL+DMY+K  S K A   F  +P  ERN+V+W  +I   AQ GD+   LK F +M+
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 470 QSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCRS 526
              Y   P++ ++  +L AC+H   +  G Q    +T+ ++        A+ ++D+  + 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           G  D A  +   MP + +E+ W+S+++   +H      K+A D   KM+K
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGR---GKEALDIFDKMQK 608


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/529 (41%), Positives = 341/529 (64%), Gaps = 8/529 (1%)

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR---SQFPFSTLLSV 284
           AR+LF  MP+ D  +++ +++ Y  + Q + +L L+R +Q    +    ++F  S+ L+ 
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAA 173

Query: 285 VANKLDLQIGRQIHTQTI---VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
            A     + GR++H   +   +  A  +  + ++L DMYAKCGR ++A+ +F  +     
Sbjct: 174 AAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDA 233

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRA-NISADQATFASILRASAELASLSLGKQLHS 400
           V WTAM+  Y   G   E   LF+ M R   +  ++ T+A +LRA A+ A  S G+Q+H 
Sbjct: 234 VSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHG 293

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            + +SG   + F+ SALL MY+K G +  A++ F+ M + ++VSW A+IS  AQNG  + 
Sbjct: 294 RMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEE 353

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L+ F+  ++SG +PD V+ + VLSAC+H GL+++GL+ F+S+ ++Y +    +HYA ++
Sbjct: 354 ALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVI 413

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG F+ AEK++  M  +P++ +W+S++  CRIHKN+  A++AA+ LF++E   + 
Sbjct: 414 DLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEP-ENP 472

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           A YV ++NIYA  G ++ V  V++ M  +G+ K+ A SW+E+  +VHVF   D+ HP+ +
Sbjct: 473 ATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKAD 532

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   ++ L  +M +EGY  D    LHD ++E K + + YHSERLA+AF +I TPEGSPI
Sbjct: 533 EIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPI 592

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V KNLR C DCHAAIKLIS+I  R+I VRDS+RFHHFKDG CSCRD+W
Sbjct: 593 KVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 5   NTVSTNMLISGYVKSG-NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +  S N LIS   +S  +L +ARELF+ M  R   +W+ L+ GY++  Q   A  L+  M
Sbjct: 93  DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM 152

Query: 64  RTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI---LIICNSLVDSY 118
           + + G+D   +  T ++ L+  +         ++H  +++ G ++     ++ ++L D Y
Sbjct: 153 QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMY 212

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTF 177
            K   +D ARRVF  MP +D+VS+ A++  +   G   E  +LF+ M +  G +P++FT+
Sbjct: 213 AKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTY 272

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A  L A    A  + GRQVH  + K+   ++ F  +ALL +YSK   +  A ++F  M +
Sbjct: 273 AGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAK 332

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KLDLQI 293
            D VS+  +I+ YA N Q +E+L+ F     +        F  +LS  A+       L+I
Sbjct: 333 PDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEI 392

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              I  Q  +            ++D+ ++ G+FE A+++  N++
Sbjct: 393 FHSIKEQYCIEHTADHYAC---VIDLLSRSGQFERAEKMIGNMA 433



 Score = 39.3 bits (90), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 24/140 (17%)

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE--------DMVQSGYQPDSV 478
           L  A + F  MP+R+  +W+AL+S   ++G  +A L  +         D   + +   S 
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 479 SLLSVLSACS------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
              +  + C       HC ++  G+                  ++++ D+  + G  D+A
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGG---------DAVLWSALADMYAKCGRVDDA 221

Query: 533 EKLMAQMPFEPDEIMWSSVI 552
            ++  +MP   D + W++++
Sbjct: 222 RRVFDRMPVR-DAVSWTAMV 240


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 264/751 (35%), Positives = 404/751 (53%), Gaps = 84/751 (11%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            + +N  I+ ++++G +A A  LF +M  R+  ++  ++ GYS   +   A  LF  +  
Sbjct: 38  VIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI-- 95

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                PD  ++ TLL               HA          L + +SL D         
Sbjct: 96  ---PRPDNYSYNTLL---------------HA----------LAVSSSLAD--------- 118

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F EMP +DSV++N +I+  A  GL   A   F     L  +    ++   L+A V
Sbjct: 119 -ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF----DLAPEKDAVSWNGMLAAYV 173

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               +   R +  F  +T +  +V   NAL+  Y +   + EAR+LF  MP  D VS+N+
Sbjct: 174 RNGRVEEARGL--FNSRTEW--DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNI 229

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M++ YA      E+ +LF         R  F ++ ++S  A    L+  R++        
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPV----RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERN 285

Query: 306 AIS---------------------------EVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           A+S                            V   N+++  YA+ G  EEAK +F  +  
Sbjct: 286 AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              V W AM++AY Q G  EE L LFIEM R     +++ FA +L   A++A+L  G QL
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  +IR+G+    F G+ALL MY K G+++DA   F+EM ER++VSWN +I+  A++G  
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L+ F+ M  +  +PD ++L+ VL+ACSH GL+E+G+ YF SM   + +  K EHY  
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           M+D+L R+G   EA  LM  MPFEPD  MW +++ + RIH+N E  + AA+++F++E   
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEP-E 584

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           +A  YV +SNIYA +G+W    +++  M ERGV+KV  +SW+E+++KVH F+A D +HP+
Sbjct: 585 NAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPE 644

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
             +I   +E+L   MKK GY   T   LHD +EE K   LKYHSE+LA+A+ ++N P G 
Sbjct: 645 KEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGR 704

Query: 699 PILVMKNLRACTDCHAA----IKLISKITGR 725
           PI V+KNLR C DCH A    I+L+ K++GR
Sbjct: 705 PIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 185/378 (48%), Gaps = 40/378 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +S N L+SGYV+ G ++ ARELF+ M  R  VSW I++ GY+++    EA +LF    
Sbjct: 192 DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF---- 247

Query: 65  TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSI-------------- 107
            D     D  T+  ++SG ++    + A  +     +     +N++              
Sbjct: 248 -DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAK 306

Query: 108 ----LIIC------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
               ++ C      N+++  Y +   L+ A+ VF  MPQKD+VS+ A++  +++ G +EE
Sbjct: 307 ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
            ++LF+EM   G   +   FA  LS    +A +  G Q+H  +++  +    FV NALL 
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   + +AR  F EM E D VS+N MI  YA +   KE+L++F  ++ T        
Sbjct: 427 MYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDIT 486

Query: 278 FSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
              +L+  ++   ++ G      +H    VT   ++ +    ++D+  + GR  EA ++ 
Sbjct: 487 LVGVLAACSHSGLVEKGISYFYSMHHDFGVT---AKPEHYTCMIDLLGRAGRLAEAHDLM 543

Query: 334 ANLS-HISTVPWTAMISA 350
            ++     +  W A++ A
Sbjct: 544 KDMPFEPDSTMWGALLGA 561



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 50/341 (14%)

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           EV  +N  +  + + GR  +A+ +FA +   ST  + AM++ Y   G L  A +LF    
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF---- 92

Query: 369 RANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           RA    D  ++ ++L A A  +SL+  + L     +R     NV     ++  +A  G +
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLV 147

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F   PE++ VSWN +++A  +NG  +     F     S  + D +S  +++S  
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSGY 203

Query: 488 SHCGLIEEGLQYF-----------NSMTQKYKLR-------------PKKE--HYASMVD 521
              G + E  + F           N M   Y  R             P ++   + ++V 
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVS 263

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
              ++G  +EA ++   MP E + + W++++ +    + ++ AK    +LF M   R+ A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDEAK----ELFNMMPCRNVA 318

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
            +  M   YA AG  E    V   M ++      A SW  +
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQK-----DAVSWAAM 354


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/702 (34%), Positives = 392/702 (55%), Gaps = 26/702 (3%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI+ Y++ G+   A  +F  M  R  V++  LI G++Q      A ++F +M++
Sbjct: 178 TFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQS 237

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G S PD VT ++LL+ C+      +  Q+H+ + K G +S  I+  SL+D Y K   ++
Sbjct: 238 SGLS-PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVE 296

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  +F    + + V +N ++  F +     ++ +LF +MQ  G +P+ FT+   L    
Sbjct: 297 TALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCT 356

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              +I LG Q+H+  VKT F  +++V+  L+D+YSK+  + +AR++   + E D VS+  
Sbjct: 357 CTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTS 416

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  Y  +E  K++L  F+E+Q           ++ +S  A    ++ G QIH +  V+ 
Sbjct: 417 MIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSG 476

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +V + N+LV++YA+CGR  EA   F  + H   + W  ++S + Q G  EEAL +F+
Sbjct: 477 YSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFM 536

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M ++ +  +  TF S L ASA LA +  GKQ+H+ VI++G       G+AL+ +Y K G
Sbjct: 537 RMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCG 596

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           S +DA   F EM ERN VSWN +I++C+Q+G     L  F+ M +               
Sbjct: 597 SFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK--------------- 641

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
                    EGL YF SM+ KY +RP+ +HYA ++DI  R+G  D A+K + +MP   D 
Sbjct: 642 ---------EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADA 692

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W +++++C++HKN+E  + AA  L ++E   D+A YV +SN YAV G+W +  QV+K 
Sbjct: 693 MVWRTLLSACKVHKNIEVGELAAKHLLELEP-HDSASYVLLSNAYAVTGKWANRDQVRKM 751

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           MR+RGVRK    SW+E+K+ VH F   D LHP   +I   +  +   + K GYK +    
Sbjct: 752 MRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHL 811

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            HD+++E +  +   HSE+LA+ F L++ P   P+ V+KNLR
Sbjct: 812 FHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLR 853



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 311/591 (52%), Gaps = 9/591 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++ +  N+LI  Y K+G +  AR +F  +  R  VSW  ++ GY+Q     EA  L+  
Sbjct: 74  GKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQ 133

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M   G     YV  +++LS C++ +   +   VHA   K G+ S   + N+L+  Y +  
Sbjct: 134 MHRAGVVPTPYV-LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCG 192

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
              LA RVF +MP +D+V+FN LI+G A+    E A+++F EMQ  G  P   T ++ L+
Sbjct: 193 SFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLA 252

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L D+  G Q+H+++ K     +  +  +LLDLY K   V  A  +F      + V 
Sbjct: 253 ACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVL 312

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N+++  +       +S +LF ++Q      +QF +  +L       ++ +G QIH+ ++
Sbjct: 313 WNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSV 372

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            T   S++ V+  L+DMY+K G  E+A+ +   L     V WT+MI+ YVQ    ++AL 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALA 432

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            F EM +  I  D    AS +   A + ++  G Q+H+ V  SG+  +V   +AL+++YA
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYA 492

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + G +++A  +F+E+  ++ ++WN L+S  AQ+G  +  LK F  M QSG + +  + +S
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
            LSA ++   I++G Q  ++   K     + E   +++ +  + G F++A+   ++M  E
Sbjct: 553 ALSASANLAEIKQGKQ-IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-E 610

Query: 543 PDEIMWSSVINSCRIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            +E+ W+++I SC  H + LE     A   F   K    + + +MS+ Y +
Sbjct: 611 RNEVSWNTIITSCSQHGRGLE-----ALDFFDQMKKEGLSYFKSMSDKYGI 656



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 274/530 (51%), Gaps = 16/530 (3%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRTDGGSDPDYVTFATLLSGCSEPDTAN 90
           M  R A S    + G+  +    +   LF D  R  GG  P  + FA  L  C       
Sbjct: 1   MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58

Query: 91  ELI-QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
           +++ ++HA  I  G     I+ N L+D Y K   +  ARRVF+E+  +D+VS+ A+++G+
Sbjct: 59  QVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+ GL EEA+ L+ +M   G  P+ +  ++ LS+       A GR VHA   K  F    
Sbjct: 119 AQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSET 178

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV NAL+ LY +      A ++F +MP  D V++N +I+ +A     + +L++F E+Q +
Sbjct: 179 FVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSS 238

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                    S+LL+  A+  DLQ G Q+H+        S+  +  SL+D+Y KCG  E A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETA 298

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             IF   +  + V W  ++ A+ Q  +L ++  LF +M  A I  +Q T+  ILR     
Sbjct: 299 LVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCT 358

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             + LG+Q+HS  +++GF S+++    L+DMY+K G L+ A +  + + E+++VSW ++I
Sbjct: 359 GEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMI 418

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-----YFNSMT 504
           +   Q+   +  L +F++M + G  PD++ L S +S C+    + +GLQ     Y +  +
Sbjct: 419 AGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYS 478

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
               +      + ++V++  R G   EA     ++  + DEI W+ +++ 
Sbjct: 479 GDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSG 521


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 370/596 (62%), Gaps = 7/596 (1%)

Query: 157 EAIKLFVEMQHLGFKPSDF-TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           EA++LF  ++  G    D  T+ A +SA +GL  I   ++V  +++ +    + ++ N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           L ++ K   +++AR+LF EMPE + +S+N +I        Y E+ +LF  +     D   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             F T++   A    +  GRQ+H+ ++ T    +V VA +L+DMY+KCG  E+A+ +F  
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   +TV W ++I+ Y   G  EEAL+++ EM  + +  D  TF+ I+R  A LASL   
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQ H+ ++R GF  ++ + +AL+D+Y+K G ++DA   F  MP +N++SWNALI+    +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G     ++ FE M+  G  P+ V+ L+VLSACS+ GL + G + F SM++ +K++P+  H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM- 574
           YA M+++L R G  DEA  L+   PF+P   MW++++ +CR+HKN E  K AA++L+ M 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 575 -EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
            EKL +   YV + NIY  +G+ E  + V + ++ RG+R + A SW+E+K + + F + D
Sbjct: 533 PEKLSN---YVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
           + H Q+ EI +K++ LM E+ K GY P     L D DE+ +   L YHSE+LAIAF LIN
Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQ-EERVLLYHSEKLAIAFGLIN 648

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           T + +P+ ++++ R C DCH+AIKLI+ +T REI VRD+SRFHHFKDG CSC D+W
Sbjct: 649 TSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 223/458 (48%), Gaps = 5/458 (1%)

Query: 52  QFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
           ++ EA +LF  +  +G  D D  T+  L+S C    +   + +V   +I  G +    + 
Sbjct: 110 RYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N ++  + K   +  ARR+F EMP+K+ +S+N +I G    G   EA +LF+ M      
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSD 229

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
                F   + A  GL  I  GRQ+H+  +KT    +VFVA AL+D+YSK   + +A+ +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +MPE   V +N +I  YA +   +E+L ++ E++ +      F FS ++ + A    L
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           +  +Q H   +      ++    +LVD+Y+K GR E+AK +F  + H + + W A+I+ Y
Sbjct: 350 EHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGY 409

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G   EA+ +F  M    +  +  TF ++L A +       G ++   + R       
Sbjct: 410 GNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPR 469

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMV 469
               + ++++  + G L +A    K+ P +  V+ W AL++AC  + + +  L  F    
Sbjct: 470 AMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFE--LGKFAAEK 527

Query: 470 QSGYQPDSVS-LLSVLSACSHCGLIEEGLQYFNSMTQK 506
             G  P+ +S  + +L+  +  G +EE      ++ ++
Sbjct: 528 LYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRR 565



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 207/446 (46%), Gaps = 43/446 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR LF+ M ++  +SW  +IGG      + EAF+LF+ M     S
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL-MMWQXFS 228

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D     F T++   +         Q+H+  +K G    + +  +L+D Y K   ++ A+ 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC 288

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +MP+K +V +N++I G+A  G +EEA+ ++ EM+  G K  +FTF+  +     LA 
Sbjct: 289 VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +Q HA +V+  F  ++    AL+DLYSK   + +A+ +F  MP  + +S+N +I  
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + +  E++++F  +       +   F  +LS  +       G +I         I  
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEM 367
             +  + ++++  + G  +EA  +  +     TV  W A+++A                 
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA----------------- 511

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           CR + + +   FA      AE       ++L ++V+             LL++Y  SG L
Sbjct: 512 CRVHKNFELGKFA------AEKLYGMGPEKLSNYVV-------------LLNIYNXSGRL 552

Query: 428 KDAIQTFKEMPERNIVSWNALISACA 453
           ++A    + +  R +     ++ AC+
Sbjct: 553 EEAAAVIQTLKRRGL----RMLPACS 574



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 34/190 (17%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K G +  A+ +F+ M  +  +SW  LI GY    +  EA ++F  M 
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML 426

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G   P++VTF  +LS CS    ++   ++   + +              D   K R +
Sbjct: 427 HEGMV-PNHVTFLAVLSACSYSGLSDRGWEIFESMSR--------------DHKIKPRAM 471

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A                 +I    +EGL +EA   F  ++   FKP+   +AA L+A 
Sbjct: 472 HYA----------------CMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLTAC 512

Query: 185 VGLADIALGR 194
               +  LG+
Sbjct: 513 RVHKNFELGK 522


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/808 (32%), Positives = 425/808 (52%), Gaps = 65/808 (8%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFV 61
            N +  + N LIS Y+  G+  +A  +F   + R  + W   +  + S         ++F 
Sbjct: 605  NPDAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFK 663

Query: 62   DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            ++   G    D   ++  L  C+        +++H  +IK G++  + +  +L++ Y + 
Sbjct: 664  ELHGKGVVF-DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC 722

Query: 122  RCLDLARRVFKEMPQKDSVSFN-ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A +VF EMP  +++ +N A+I     E L ++ ++LF +MQ    K    T    
Sbjct: 723  WGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL-QKGVELFRKMQFSFLKAETATIVRV 781

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
            L A   +  +   +Q+H +V +     +V + N L+ +YSK+  +  AR++F  M   + 
Sbjct: 782  LQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT 841

Query: 241  VSYNVMITCYA--------------------------WN--------EQYKES-LKLFRE 265
             S+N MI+ YA                          WN          YKE  L + + 
Sbjct: 842  SSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 901

Query: 266  LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
            +Q   F  +    +++L  ++    L +G++ H   +      +V V  SL+DMY K   
Sbjct: 902  MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961

Query: 326  FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF------ 379
               A+ +F N+ + +   W +++S Y  KG  E+AL L  +M +  I  D  T+      
Sbjct: 962  LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 1021

Query: 380  ---------------ASI---LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
                           ASI   LRA A L+ L  GK++H   IR+GF+ +VF  +AL+DMY
Sbjct: 1022 YAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            +KS SLK+A + F+ +  + + SWN +I   A  G  +  +  F +M + G  PD+++  
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141

Query: 482  SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            ++LSAC + GLI EG +YF+SM   Y++ P+ EHY  MVD+L R+G  DEA  L+  MP 
Sbjct: 1142 ALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPL 1201

Query: 542  EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            +PD  +W +++ SCRIHKNL FA+ AA  LFK+E   ++A Y+ M N+Y++  +WE +  
Sbjct: 1202 KPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEP-NNSANYILMMNLYSIFNRWEDMDH 1260

Query: 602  VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            +++ M   GVR    +SW+++  +VHVF+++++ HP   +I  ++  L+ EMKK GY PD
Sbjct: 1261 LRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPD 1320

Query: 662  TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
             +C   + DE  K + L  H+E+LAI + LI    G PI V+KN R C+DCH+A K IS 
Sbjct: 1321 VNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISL 1380

Query: 722  ITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +  RE+ +RD  RFHHF++G CSC DFW
Sbjct: 1381 VKARELFLRDGVRFHHFREGKCSCNDFW 1408



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 182/404 (45%), Gaps = 47/404 (11%)

Query: 1    MPNQNTVSTNMLISGYVKSGNLATARELF----NSMVDRTAVSWTILIGGYSQKNQFREA 56
            M N+NT S N +IS Y   G L  A  LF    +S +    V+W  L+ G+       E 
Sbjct: 836  MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 895

Query: 57   FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
              +   M+ + G  P+  +  ++L   SE    N   + H  +++ G++  + +  SL+D
Sbjct: 896  LNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID 954

Query: 117  SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
             Y K   L  A+ VF  M  ++  ++N+L++G++ +G+ E+A++L  +M+  G KP   T
Sbjct: 955  MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014

Query: 177  FAAALS------------------------AGVGLADIALGRQVHAFVVKTNFVENVFVA 212
            +   +S                        A   L+ +  G+++H   ++  F+E+VFVA
Sbjct: 1015 WNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 1074

Query: 213  NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
             AL+D+YSK   +  A K+F  +      S+N MI  +A     KE++ +F E+Q     
Sbjct: 1075 TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 1134

Query: 273  RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKE 331
                 F+ LLS   N   +  G +     I    I   ++    +VD+  + G  +EA +
Sbjct: 1135 PDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWD 1194

Query: 332  IFANLSHISTVP-------WTAMISAYVQKGNLE----EALNLF 364
            +      I T+P       W A++ +     NL      A NLF
Sbjct: 1195 L------IHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLF 1232


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/653 (38%), Positives = 383/653 (58%), Gaps = 11/653 (1%)

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ--K 137
           L  CS   T+    Q+H+ +I     S+  + N+L++ Y K   +D    +F   P   K
Sbjct: 36  LLNCSR--TSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSK 93

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           + VS+ +LIT   +     +A+  F  M+  G  P+ +TF+A LSA         G Q+H
Sbjct: 94  NVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMH 153

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
           + V K  F+  VFV +AL+D+Y+K   ++ A K+F EMP  + VS+N MI  +  N+ Y 
Sbjct: 154 SLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYD 213

Query: 258 ESLKLFREL---QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +++  F+ L     T  D  +  FS++ S  AN  +L+ G+Q+H   +     + V + N
Sbjct: 214 QAIFFFKTLLLENLTALD--EVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINN 271

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL DMY KCG F +  ++F+N      V W  MI AYV   N E+A N F  M R     
Sbjct: 272 SLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIP 331

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D+A+++S+L + A LA+L  G  +H+ +IRSGF+ N+   S+L+ MYAK GSL DA Q F
Sbjct: 332 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIF 391

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           +E  +RN+V W A+I+AC Q+G A   ++ FE M++ G +PD ++ +SVLSACSH G +E
Sbjct: 392 EETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVE 451

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG  YFNSM + + + P  EHYA +VD+L R+G  D A++ +  MP +PD  +W +++++
Sbjct: 452 EGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR H NL   K+ A +LF +E   +   YV + NI    G      +V++ M   GVRK 
Sbjct: 512 CRNHSNLIMGKEVALKLFDLEP-DNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKE 570

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              SW+++K+  +VFT +D+ H +T EI   +E L + +KK+GY  +T  A+ +  EE K
Sbjct: 571 PGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEYK 629

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
            +SL YHSE++A+AF L++ P G+PI + KNLR C DCH  +K  S+I  REI
Sbjct: 630 EQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREI 682



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 233/456 (51%), Gaps = 12/456 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFK---LFVDMR 64
           N L++ Y K G++     LF+S  D  +  VSWT LI   +Q  +F+  FK    F  MR
Sbjct: 66  NNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLI---TQLTRFKRPFKALTFFNHMR 122

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P++ TF+ +LS C++   +    Q+H+ + K G+ + + + ++LVD Y K   +
Sbjct: 123 R-SGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDM 181

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSA 183
            +A +VF+EMP ++ VS+N +I GF +  L ++AI  F  +        D  +F++  SA
Sbjct: 182 LMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSA 241

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                ++  G+QVH   +K      V++ N+L D+Y K     +  KLF      D V++
Sbjct: 242 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 301

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N+MI  Y +N  Y+++   F  ++       +  +S++L   AN   L  G  IH Q I 
Sbjct: 302 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 361

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +  +  ++VA+SL+ MYAKCG   +A +IF      + V WTA+I+A  Q G+    + L
Sbjct: 362 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 421

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F +M R  I  D  TF S+L A +    +  G    +S +   G        + ++D+ +
Sbjct: 422 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 481

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGD 457
           ++G L  A +  + MP +   S W AL+SAC  + +
Sbjct: 482 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSN 517



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 200/446 (44%), Gaps = 64/446 (14%)

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDL----QIGRQIHTQTIVTTAISEVKVANS 315
           L L   L F +    Q PF   L+ + + L+     +   QIH+Q I T  +S   + N+
Sbjct: 8   LPLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNN 67

Query: 316 LVDMYAKCGRFEEAKEIFANLSHIS--TVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           L+++YAKCG  ++   +F++    S   V WT++I+   +     +AL  F  M R+ + 
Sbjct: 68  LLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVY 127

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            +  TF+++L A  +  +   G+Q+HS V + GF++ VF  SAL+DMYAK   +  A + 
Sbjct: 128 PNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKV 187

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP-DSVSLLSVLSACSHCGL 492
           F+EMP RN+VSWN +I    QN      +  F+ ++       D VS  SV SAC++ G 
Sbjct: 188 FEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGN 247

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL----------------- 535
           +E G Q  + +  K  +        S+ D+  + G F++  KL                 
Sbjct: 248 LEFGKQ-VHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIM 306

Query: 536 -----------------MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK---ME 575
                            M +    PDE  +SSV++SC     L       +Q+ +   ++
Sbjct: 307 AYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVK 366

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL 635
            LR A+  + M   YA  G      Q+ +   +R V   TA              A  + 
Sbjct: 367 NLRVASSLITM---YAKCGSLVDAFQIFEETEDRNVVCWTA------------IIAACQQ 411

Query: 636 HPQTNEIRRKIENLMQEMKKEGYKPD 661
           H   N +   +E L ++M +EG KPD
Sbjct: 412 HGHANWV---VE-LFEQMLREGIKPD 433



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 166/360 (46%), Gaps = 8/360 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K  ++  A ++F  M  R  VSW  +I G+ Q   + +A   F  +  +  +  
Sbjct: 171 LVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTAL 230

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V+F+++ S C+         QVH   +K G  +++ I NSL D Y K    +   ++F
Sbjct: 231 DEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLF 290

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
                +D V++N +I  +      E+A   F  M+  G  P + ++++ L +   LA + 
Sbjct: 291 SNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALY 350

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H  ++++ FV+N+ VA++L+ +Y+K   +V+A ++F E  + + V +  +I    
Sbjct: 351 QGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQ 410

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +      ++LF ++           F ++LS  ++   ++ G       I    I    
Sbjct: 411 QHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGH 470

Query: 312 VANS-LVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQKGNL----EEALNLF 364
              + +VD+ ++ G  + AK  F  L  I      W A++SA     NL    E AL LF
Sbjct: 471 EHYACIVDLLSRAGELDRAKR-FIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 529


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/640 (35%), Positives = 378/640 (59%), Gaps = 3/640 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GF 170
           NSL++ Y K      AR++F  M Q++ VS++AL+ G+  +G   E + LF  +  L   
Sbjct: 65  NSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSA 124

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            P+++ F   LS       +  G+Q H +++K+  + + +V NAL+ +YS+   V  A +
Sbjct: 125 YPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQ 184

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +   +P  D  SYN +++    +    E+ ++ + +           + ++L + A   D
Sbjct: 185 ILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRD 244

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           LQ+G QIH Q + T  + +V V+++L+D Y KCG    A++ F  L   + V WTA+++A
Sbjct: 245 LQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTA 304

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y+Q G+ EE LNLF +M   +   ++ TFA +L A A L +L+ G  LH  ++ SGF ++
Sbjct: 305 YLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNH 364

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           +  G+AL++MY+KSG++  +   F  M  R++++WNA+I   + +G  +  L  F+DM+ 
Sbjct: 365 LIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMS 424

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           +G  P+ V+ + VLSAC H  L++EG  YF+ + +K+ + P  EHY  MV +L R+G  D
Sbjct: 425 AGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLD 484

Query: 531 EAEKLM-AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           EAE  M      + D + W +++N+C IH+N    K+  + + +M+   D   Y  +SN+
Sbjct: 485 EAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDP-HDVGTYTLLSNM 543

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           +A A +W+ V +++K M+ER ++K    SW+++++  HVF +    HP++ +I  K++ L
Sbjct: 544 HAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQL 603

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
           +  +K  GY PD    LHD ++E K   L +HSE+LA+A+ L+  P   PI ++KNLR C
Sbjct: 604 LAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMC 663

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH A+KLISK T R I VRD++RFHHF++G C+C D W
Sbjct: 664 DDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 257/527 (48%), Gaps = 15/527 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + +    N LI+ Y K G    AR+LF+ M+ R  VSW+ L+ GY  K +  E   LF +
Sbjct: 58  DSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRN 117

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           + +   + P+   F  +LS C++     E  Q H  ++K G      + N+L+  Y +  
Sbjct: 118 LVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D A ++   +P  D  S+N++++   + G   EA ++   M          T+ + L 
Sbjct: 178 HVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLG 237

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               + D+ LG Q+HA ++KT  V +VFV++ L+D Y K   V+ ARK F  + + + V+
Sbjct: 238 LCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVA 297

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  ++T Y  N  ++E+L LF +++      ++F F+ LL+  A+ + L  G  +H + +
Sbjct: 298 WTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIV 357

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
           ++   + + V N+L++MY+K G  + +  +F+N+ +   + W AMI  Y   G  ++AL 
Sbjct: 358 MSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALL 417

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLG-----KQLHSFVIRSGFMSNVFSGSAL 417
           +F +M  A    +  TF  +L A   LA +  G     + +  F +  G        + +
Sbjct: 418 VFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY----TCM 473

Query: 418 LDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           + +  ++G L +A    K   +   ++V+W  L++AC  + +     +  E ++Q    P
Sbjct: 474 VALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQ--MDP 531

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             V   ++LS         +G+     + ++  +  KKE  AS +DI
Sbjct: 532 HDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNI--KKEPGASWLDI 576



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 39/275 (14%)

Query: 380 ASILRASAELASLSLGKQLHS-FVIRSGFM--SNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            ++L+ SA   SL  GK +H+  V+R+     S++   ++L+++Y+K G  K A + F  
Sbjct: 27  VNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIE 494
           M +RN+VSW+AL+      G+    L  F ++V   S Y P+      VLS C+  G ++
Sbjct: 87  MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAY-PNEYIFTIVLSCCADSGRVK 145

Query: 495 EGLQ----------------------------YFNSMTQKYKLRPKKE--HYASMVDILC 524
           EG Q                            + +S  Q     P  +   Y S++  L 
Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALV 205

Query: 525 RSGCFDEAEKLMAQMPFEP---DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
            SGC  EA +++ +M  E    D + + SV+  C   ++L+   +   QL K   + D  
Sbjct: 206 ESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
               + + Y   G+  +  +    +R+R V   TA
Sbjct: 266 VSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTA 300


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/561 (39%), Positives = 340/561 (60%), Gaps = 9/561 (1%)

Query: 194 RQVHAFVVK-----TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           RQ+HAF ++     TN     ++   LL   S    +  A ++F ++   +  ++N MI 
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSP---MSYAHQIFSQIQNPNIFTWNTMIR 113

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA +E    +L+L+R++  +  +     +  LL  +A  +D++ G ++H+  I     S
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V V N+LV MYA CG  E A ++F  ++  + V W ++I+ Y   G   EAL LF EM 
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T  S+L A AEL +L+LG++ H ++++ G   N+ +G+ALLD+YAK GS++
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A + F EM E+++VSW +LI   A NG  +  L+ F+++ + G  P  ++ + VL ACS
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           HCG+++EG  YF  M ++Y + PK EHY  MVD+L R+G   +A + +  MP +P+ ++W
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C IH +L   + A  QL ++E  + +  YV +SN+YA   +W  V +V++ M  
Sbjct: 414 RTLLGACTIHGHLALGEVARAQLLQLEP-KHSGDYVLLSNLYASEQRWSDVHKVRRTMLR 472

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
            GV+K   +S VEL++++H F   D  HPQT EI  K+  + + +K EGY P  S  L D
Sbjct: 473 EGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLAD 532

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +EE K  +L YHSE++AIAF LINT  G PI V+KNLR C DCH AIKLISK+  REI 
Sbjct: 533 IEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIV 592

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD SRFHHFKDG CSC+D+W
Sbjct: 593 VRDRSRFHHFKDGHCSCKDYW 613



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 164/342 (47%), Gaps = 4/342 (1%)

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
           S+C    +  A ++F ++   +  ++N +I G+A+      A++L+ +M     +P   T
Sbjct: 85  SFCSP--MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHT 142

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +   L A   L D+  G +VH+  ++  F   VFV N L+ +Y+       A KLF  M 
Sbjct: 143 YPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMA 202

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E + V++N +I  YA N +  E+L LFRE+     +   F   +LLS  A    L +GR+
Sbjct: 203 ERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRR 262

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
            H   +       +   N+L+D+YAKCG   +A ++F  +   S V WT++I      G 
Sbjct: 263 AHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGF 322

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGS 415
            +EAL LF E+ R  +   + TF  +L A +    +  G           G +  +    
Sbjct: 323 GKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382

Query: 416 ALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
            ++D+  ++G +K A +  + MP + N V W  L+ AC  +G
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 171/338 (50%), Gaps = 3/338 (0%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           ++ A ++F+ + +    +W  +I GY++      A +L+  M      +PD  T+  LL 
Sbjct: 90  MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSC-IEPDTHTYPFLLK 148

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             ++     E  +VH+  I+ G+ S++ + N+LV  Y      + A ++F+ M +++ V+
Sbjct: 149 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 208

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N++I G+A  G   EA+ LF EM   G +P  FT  + LSA   L  +ALGR+ H ++V
Sbjct: 209 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 268

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           K     N+   NALLDLY+K   + +A K+F EM E   VS+  +I   A N   KE+L+
Sbjct: 269 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 328

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMY 320
           LF+EL+      S+  F  +L   ++   +  G     +      I  +++    +VD+ 
Sbjct: 329 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLL 388

Query: 321 AKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            + G  ++A E   N+    + V W  ++ A    G+L
Sbjct: 389 GRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHL 426



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 51/334 (15%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G+  +A +LF  M +R  V+W  +I GY+   +  EA  LF +M    G 
Sbjct: 179 NTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR-GV 237

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +PD  T  +LLS C+E        + H  ++K G +  L   N+L+D Y K   +  A +
Sbjct: 238 EPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHK 297

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGL 187
           VF EM +K  VS+ +LI G A  G  +EA++LF E++  G  PS+ TF   L A    G+
Sbjct: 298 VFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGM 357

Query: 188 ADIA--------------------------LGR-----QVHAFVVKTNFVENVFVANALL 216
            D                            LGR     Q H F+       N  V   LL
Sbjct: 358 VDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 417

Query: 217 DLYSKHDCVVEARKLFGEM---------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
                  C +      GE+         P+  G  Y ++   YA  +++ +  K+ R + 
Sbjct: 418 G-----ACTIHGHLALGEVARAQLLQLEPKHSG-DYVLLSNLYASEQRWSDVHKVRRTM- 470

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
             R    + P  +L+ +     +  +G + H QT
Sbjct: 471 -LREGVKKTPGHSLVELRNRLHEFVMGDRSHPQT 503



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N  + N L+  Y K G++  A ++F+ M +++ VSWT LI G +     +EA +LF +
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           +    G  P  +TF  +L  CS     +E
Sbjct: 333 LERK-GLMPSEITFVGVLYACSHCGMVDE 360


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/668 (35%), Positives = 374/668 (55%), Gaps = 5/668 (0%)

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           S   T N L QVH  +I    +    + N L+      R    +  +F      +   +N
Sbjct: 21  SVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYN 80

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
            LI GF    L  E + LF+ ++  G     FTF   L A    ++  LG  +H+ VVK 
Sbjct: 81  TLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKC 140

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            F  +V    +LL +YS    + +A K+F E+PE   V++  + + Y    +++E++ LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLF 200

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI--HTQTIVTTAISEVKVANSLVDMYA 321
           +++         +    +LS   +  DL  G  I  H + +     S V+   +LV++YA
Sbjct: 201 KKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR--TTLVNLYA 258

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           KCG+ E+A+ +F ++     V W+ MI  Y      +E +  F++M + N+  DQ +   
Sbjct: 259 KCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVG 318

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
            L + A L +L LG+   S + R  F++N+F  +AL+DMYAK G++    + FKEM E++
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           IV  NA IS  A+NG  + +   F    + G  PD  + L +L  C H GLI++GL++FN
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           +++  Y L+   EHY  MVD+  R+G  D+A +L+  MP  P+ I+W ++++ CR+ K+ 
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           + A+    +L  +E   +A  YV +SNIY+V+G+W+  ++V+  M  +G++K+  YSW+E
Sbjct: 499 QLAETVLKELIALEPW-NAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIE 557

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           L+  VH F A+D+ HP +++I  K+E+L  EM+  G+ P T     D ++E K   L +H
Sbjct: 558 LEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHH 617

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           SE+LA+AF LI+T  G  I V+KNLR C DCH  +KLISKIT REI VRD++RFH F +G
Sbjct: 618 SEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNG 677

Query: 742 FCSCRDFW 749
            CSC D+W
Sbjct: 678 SCSCNDYW 685



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 206/432 (47%), Gaps = 3/432 (0%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           +  LI G+   + F E   LF+ +R  G +   + TF  +L  C+        I +H+ +
Sbjct: 79  YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGF-TFPLVLKACTRASNRKLGIDLHSLV 137

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           +K G+N  +    SL+  Y     L+ A +VF+E+P++  V++ AL +G+   G + EAI
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            LF +M  +G +P  +     LSA V + D+  G  +   + +    +N FV   L++LY
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           +K   + +AR +F  M E D V+++ MI  YA N   KE ++ F ++        QF   
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
             LS  A+   L +G    +       ++ + +AN+L+DMYAKCG      E+F  +   
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQL 398
             V   A IS   + G+++ +  +F +  +  IS D +TF  +L        +  G +  
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
           ++          V     ++D++ ++G L DA +   +MP R N + W AL+S C    D
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKD 497

Query: 458 AQATLKSFEDMV 469
            Q      ++++
Sbjct: 498 TQLAETVLKELI 509



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 167/352 (47%), Gaps = 7/352 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +  +   L+S Y  SG L  A ++F  + +R+ V+WT L  GY+   + REA  LF  
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           M  + G  PD      +LS C       + E I  H + ++   NS   +  +LV+ Y K
Sbjct: 203 M-VEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNS--FVRTTLVNLYAK 259

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR VF  M +KD V+++ +I G+A     +E I+ F++M     KP  F+    
Sbjct: 260 CGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGF 319

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS+   L  + LG    + + +  F+ N+F+ANAL+D+Y+K   +    ++F EM E D 
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHT 299
           V  N  I+  A N   K S  +F + +          F  LL    +   +Q G R  + 
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            + V      V+    +VD++ + G  ++A  +  ++    + + W A++S 
Sbjct: 440 ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 270/773 (34%), Positives = 405/773 (52%), Gaps = 47/773 (6%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L++ Y K G++  AR +F+ + +R  VSW  +I    +  ++  A  LF  M  
Sbjct: 120 TAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLL 179

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELI---QVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +    P   T  ++   CS  +  N L+   QVHA +++ G +      N+LV  Y K+ 
Sbjct: 180 EN-VGPTSFTLVSVAHACS--NLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLG 235

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A+ +F     KD VS+N +I+  ++    EEA+     M   G +P+  T A+ L 
Sbjct: 236 RVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLP 295

Query: 183 AGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           A   L  +  G+++HAFV+  N  +EN FV  AL+D+Y       + R +F  M      
Sbjct: 296 ACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIA 355

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            +N MI  Y  NE   E+++LF E+ F      +    S++L              IH+ 
Sbjct: 356 VWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSC 415

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +      +  V N+L+DMY++ GR E A+ IF +++    V W  MI+ YV  G  ++A
Sbjct: 416 VVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDA 475

Query: 361 LNLFIEMCRAN------------------ISADQATFASILRASAELASLSLGKQLHSFV 402
           LNL  +M R                    +  +  T  ++L   A LA+L  GK++H++ 
Sbjct: 476 LNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYA 535

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++     +V  GSAL+DMYAK G L  +   F++M  RN+++WN LI A   +G  +  L
Sbjct: 536 VKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEAL 595

Query: 463 KSFEDMVQSG-----YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           K F  MV+ G      +P+ V+ +++ ++ SH G+++EGL  F +M  K+ + P  +HYA
Sbjct: 596 KLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYA 655

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            +VD+L RSG  +EA  L+  MP    ++  WSS++ +C+IH+NLE  + AA  LF ++ 
Sbjct: 656 CLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP 715

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
                          V       S + + M+E+GVRK    SW+E   +VH F A D  H
Sbjct: 716 --------------NVLDYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSH 761

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
           PQ+ E+   +E L   MKKEGY PDTSC LH+  EE K   L  HSERLAIAF L+NT  
Sbjct: 762 PQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSP 821

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G+ I V KNLR C DCH A K ISKI  REI +RD  RFHHF++G CSC D+W
Sbjct: 822 GTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 197/402 (49%), Gaps = 10/402 (2%)

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
            +AI  +  M   G  P +F F A L A  G+ D+ LG+Q+HA V K        V N+L
Sbjct: 67  HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSL 126

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           +++Y K   +  AR++F E+   D VS+N MI      E+++ ++ LFR +       + 
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 276 FPFSTLLSVVANKLD-LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           F   ++    +N ++ L +G+Q+H   ++          N+LV MYAK GR  EAK +F 
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHA-FVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFD 245

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
                  V W  +IS+  Q    EEAL     M ++ +  +  T AS+L A + L  L  
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 395 GKQLHSFVI-RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           GK++H+FV+  +  + N F G AL+DMY      +     F  M  R I  WNA+I+   
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365

Query: 454 QNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCG--LIEEGLQYFNSMTQKYKLR 510
           +N      ++ F +MV + G  P+SV+L SVL AC  C   L +EG+    S   K+   
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIH---SCVVKWGFE 422

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             K    +++D+  R G  + A  +   M    D + W+++I
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNTMI 463



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 344 WTAMISAYVQKGN-LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
           W + + +  Q  +   +A++ +  M  A +  D   F ++L+A+A +  L+LGKQLH+ V
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            + G        ++L++MY K G +  A + F E+  R+ VSWN++I+A  +  + +  +
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSH 489
             F  M+     P S +L+SV  ACS+
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSN 198



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++    + L+  Y K G L  +R +F  M  R  ++W +LI  Y    +  EA KLF
Sbjct: 539 MLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLF 598

Query: 61  VDMRTDGGSD----PDYVTFATLLSGCSEPDTANE 91
             M  +G ++    P+ VT+  + +  S     +E
Sbjct: 599 RRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDE 633


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/723 (35%), Positives = 398/723 (55%), Gaps = 47/723 (6%)

Query: 69  SDPDYVTF-----ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC---- 119
           SDP Y +       +LL  C    T   L  +HA +IK G ++     + L++ +C    
Sbjct: 24  SDPPYDSIRNHPSLSLLHNCK---TLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSP 79

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L  A  VFK + + + + +N +  G A       A+KL+V M  LG  P+ +TF  
Sbjct: 80  HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDC 224
            L +         G+Q+H  V+K     +++V  +L+ +Y               S H  
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199

Query: 225 VV----------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           VV                 A+KLF E+P  D VS+N MI+ YA    YKE+L+LF+++  
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
           T     +    T++S  A    +++GRQ+H         S +K+ N+L+D+Y+KCG  E 
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  L +   + W  +I  Y      +EAL LF EM R+  + +  T  SIL A A 
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379

Query: 389 LASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           L ++ +G+ +H ++ +   G  +     ++L+DMYAK G ++ A Q F  +  +++ SWN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           A+I   A +G A A+   F  M + G QPD ++ + +LSACSH G+++ G   F +MTQ 
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           YK+ PK EHY  M+D+L  SG F EAE+++  M  EPD ++W S++ +C++H N+E  + 
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
            A+ L K+E   +   YV +SNIYA AG+W  V++ +  + ++G++KV   S +E+ S V
Sbjct: 560 FAENLIKIEP-ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F   D+ HP+  EI   +E +   ++K G+ PDTS  L + +EE K  +L++HSE+LA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           IAF LI+T  G+ + ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC 
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738

Query: 747 DFW 749
           D+W
Sbjct: 739 DYW 741



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 234/505 (46%), Gaps = 43/505 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  +  G++  +    A KL+V M    G  P+  TF  +L
Sbjct: 83  GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVL 141

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
             C++     E  Q+H  ++K G +  L +  SL+  Y +   L+ A +VF         
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201

Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                  E+P KD VS+NA+I+G+A+ G  +EA++LF +M    
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T    +SA      I LGRQVH ++    F  N+ + NAL+DLYSK   +  A 
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +P  D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381

Query: 290 DLQIGRQIHTQTI-----VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            + IGR IH         VT A S   +  SL+DMYAKCG  E A ++F ++ H S   W
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            AMI  +   G  + + +LF  M +  I  D  TF  +L A +    L LG+ +   + +
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498

Query: 405 SGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATL 462
              M+        ++D+   SG  K+A +    M    + V W +L+ AC  +G+ +   
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSA 486
              E++++     P S  LLS + A
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYA 583



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 214/469 (45%), Gaps = 32/469 (6%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+++ VS   LI GY   G +  A++LF+ +  +  VSW  +I GY++   ++EA +LF 
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           DM       PD  T  T++S C++  +     QVH  I   G+ S L I N+L+D Y K 
Sbjct: 256 DMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ A  +F+ +P KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374

Query: 182 SAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A   L  I +GR +H ++ K          +  +L+D+Y+K   +  A ++F  +    
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-H 298
             S+N MI  +A + +   S  LF  ++          F  LLS  ++   L +GR I  
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQKGNL 357
           T T       +++    ++D+    G F+EA+E+   +      V W +++ A    GN+
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554

Query: 358 E------------EALNLFIEMCRANISADQATFASILRASAEL-----------ASLSL 394
           E            E  N    +  +NI A    +  + +  A L           +S+ +
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLD----MYAKSGSLKDAIQTFKEMPE 439
              +H F+I   F         +L+    +  K+G + D  +  +EM E
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/708 (35%), Positives = 383/708 (54%), Gaps = 75/708 (10%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
            SLV +      L  A   F  +P  ++D+V  NA+++ FA+  L   A+ +F  +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 170 -FKPSDFTFAAALSAGVGLADIALGR--QVHAFVVKTNFVENVFVANALLDLYSKHD--- 223
             +P D++F A +SA   + ++A     Q+H  V+K+     + V+NAL+ LY K D   
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 224 CVVEARKLFGEMP----------------------------EVDG---VSYNVMITCYAW 252
              +ARK+  EMP                            EVDG   V +N MI+ Y  
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT----TAIS 308
           +    ++ +LFR +   +    +F F+++LS  AN      G+ +H Q I         +
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 309 EVKVANSLVDMYAKCGR-------------------------------FEEAKEIFANLS 337
            + V N+LV +Y+K G+                                ++A E+F  + 
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           + + + W  M+S YV  G  E+AL LF +M   ++     T+A  + A  EL +L  G+Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           LH+ +++ GF ++  +G+ALL MYAK G++ DA   F  MP  + VSWNA+ISA  Q+G 
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F+ MV  G  PD +S L++L+AC+H GL++EG  YF SM + + + P ++HYA
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            ++D+L RSG   EA  L+  MPFEP   +W ++++ CR + ++EF   AADQLF+M   
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D   Y+ +SN Y+ AG+W   ++V+K MR+RGV+K    SW+E+ SK+HVF   D  HP
Sbjct: 636 HDGT-YILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
           +  E+ + +E +   M+K GY PDT   LHD +   K   L  HSE+LA+ F L+  P G
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 754

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           + + V+KNLR C DCH A+  +SK  GREI VRD  RFHHFKDG CSC
Sbjct: 755 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 225/533 (42%), Gaps = 75/533 (14%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFKL 59
           P +       L++    +G L  A   F+++    R  V    ++  +++ +    A  +
Sbjct: 88  PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDS 117
           F  +   G   PD  +F  L+S   +     A    Q+H  ++K G  ++L + N+L+  
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 207

Query: 118 YCKIRCLDL---ARRVFKEMPQKDS-------------------------------VSFN 143
           Y K    +    AR+V  EMP KD                                V +N
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 267

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK- 202
           A+I+G+ + G+  +A +LF  M        +FTF + LSA         G+ VH  +++ 
Sbjct: 268 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 327

Query: 203 -TNFVEN--VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------------- 244
             NFV    + V NAL+ LYSK   +V A+++F  M   D VS+N               
Sbjct: 328 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 387

Query: 245 ----------------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
                           VM++ Y      +++LKLF +++        + ++  ++     
Sbjct: 388 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 447

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L+ GRQ+H   +     +     N+L+ MYAKCG   +A+ +F  + ++ +V W AMI
Sbjct: 448 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMI 507

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GF 407
           SA  Q G+  EAL LF +M    I  D+ +F +IL A      +  G      + R  G 
Sbjct: 508 SALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 567

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
                  + L+D+  +SG + +A    K MP E     W A++S C  NGD +
Sbjct: 568 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 620



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 40/396 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ ++   ++ GYV+ G++  AR +F  +  +  V W  +I GY Q     +AF+LF
Sbjct: 227 MPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELF 286

Query: 61  VDMRTDGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------ 107
             M ++    P D  TF ++LS C+          VH  II+   N +            
Sbjct: 287 RRMVSE--KVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALV 344

Query: 108 -----------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                                  ++  N+++  Y    CLD A  VFK MP K+ +S+  
Sbjct: 345 TLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMV 404

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +++G+   GL+E+A+KLF +M+    KP D+T+A A++A   L  +  GRQ+HA +V+  
Sbjct: 405 MVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCG 464

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  +    NALL +Y+K   V +AR +F  MP +D VS+N MI+    +   +E+L+LF 
Sbjct: 465 FEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFD 524

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKC 323
           ++     D  +  F T+L+   +   +  G            IS  +   + L+D+  + 
Sbjct: 525 QMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRS 584

Query: 324 GRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           GR  EA+++   +    T   W A++S     G++E
Sbjct: 585 GRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 620



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 148/345 (42%), Gaps = 53/345 (15%)

Query: 313 ANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYVQKGNLEEALNLFIEMC-R 369
           A SLV   A  GR  +A   F  +  +   TV   AM+SA+ +      A+++F  +   
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 370 ANISADQATFASILRASAELASLSLGK--QLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            ++  D  +F +++ A  ++ +L+     QLH  V++SG  + +   +AL+ +Y K  + 
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 428 K---DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM---------------V 469
           +   DA +   EMP+++ ++W  ++    + GD  A    FE++               V
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 470 QSGYQPDSVSLL----------------SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           QSG   D+  L                 SVLSAC++ G    G        Q  +L+P  
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHG---QIIRLQPNF 331

Query: 514 EHYA------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
              A      ++V +  + G    A+++   M  + D + W+++++       L+     
Sbjct: 332 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLD----K 386

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           A ++FK+   ++   ++ M + Y   G  E   ++   MR   V+
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 431



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 23/209 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMV----DRTAVSWTILIGGYSQKNQFREA 56
           MPN ++VS N +IS   + G+   A ELF+ MV    D   +S+  ++   +      E 
Sbjct: 495 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 554

Query: 57  FKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQVHA-DIIKFGYNSILIICN 112
           F  F  M+ D G  P    Y     LL        A +LI+    +     + +IL  C 
Sbjct: 555 FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCR 614

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP 172
           +  D        D   ++F+ +PQ D  ++  L   ++  G   +A ++   M+  G K 
Sbjct: 615 TNGDMEFGAYAAD---QLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 670

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVV 201
                        G + I +G ++H F+V
Sbjct: 671 EP-----------GCSWIEVGSKIHVFLV 688


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/727 (35%), Positives = 402/727 (55%), Gaps = 53/727 (7%)

Query: 69  SDPDYVT-----FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           SDP Y       +  LL  C      N   Q+H+ IIK G N+ + + + L+  +C +  
Sbjct: 19  SDPPYKILEQHPYLNLLEKCK---NINTFKQIHSLIIKTGLNNTVFVQSKLI-HFCAVSP 74

Query: 124 ---LDLARRVFKEMPQKDSVS---FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
              L  A  +F+E  Q    +   +N+LI G++       ++ LF  M + G +P+  TF
Sbjct: 75  SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTF 134

Query: 178 AAALSAGVGLADIALGRQVHAFVVK----------------------TNFVENVFVANAL 215
                +         G+Q+HA  +K                       +F   VF  ++L
Sbjct: 135 PFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSL 194

Query: 216 LDL---------YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
            D          Y    C+ +AR+LF E+P  D VS+N MI+ Y  + +++E++  F E+
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
           Q      ++     +LS   +    ++G+ I +        S +++ N+L+DMY KCG  
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET 314

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           + A+E+F  +     + W  MI  Y      EEAL LF  M R+N+  +  TF  IL A 
Sbjct: 315 DIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHAC 374

Query: 387 AELASLSLGKQLHSFV---IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           A L +L LGK +H+++   +R+   SN    ++L+DMYAK G ++ A + F+ M  RN+ 
Sbjct: 375 ACLGALDLGKWVHAYIDKNLRNS--SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLA 432

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           SWNA++S  A +G A+  L  F +MV  G ++PD ++ + VLSAC+  GL++ G QYF S
Sbjct: 433 SWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRS 492

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           M Q Y + PK +HY  M+D+L R+  F+EAE LM  M  EPD  +W S++++C+ H  +E
Sbjct: 493 MIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
           F +  A++LF++E   +A  +V +SNIYA AG+W+ V++++  + ++G++KV   + +E+
Sbjct: 553 FGEYVAERLFQLEP-ENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEI 611

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
              VH F   D+ HP+ N I + +  + + +++ G+ P+TS  L+D DEE K  +L  HS
Sbjct: 612 DGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHS 671

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E+LAI+F LI T  G+ I ++KNLR C +CH+A KLISKI  REI  RD +RFHHFKDGF
Sbjct: 672 EKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGF 731

Query: 743 CSCRDFW 749
           CSC D W
Sbjct: 732 CSCNDCW 738



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 222/505 (43%), Gaps = 41/505 (8%)

Query: 19  SGNLATARELF--NSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           SG+L+ A  LF  N    +  V  W  LI GYS  +    +  LF  M   G   P+  T
Sbjct: 75  SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHT 133

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  L   C++    +E  Q+HA  +K   +    +  S++  Y  +  +D AR VF +  
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193

Query: 136 QKDSVSFNALITGFAKEGL-------------------------------NEEAIKLFVE 164
            +D+VSF ALITG+  +G                                 EEAI  F E
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           MQ     P+  T    LSA        LG+ + ++V    F  N+ + NAL+D+Y K   
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
              AR+LF  + E D +S+N MI  Y++   Y+E+L LF  +  +    +   F  +L  
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373

Query: 285 VANKLDLQIGRQIHTQTIVTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
            A    L +G+ +H          S   +  SL+DMYAKCG  E A+ +F ++   +   
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANI-SADQATFASILRASAELASLSLGKQ-LHSF 401
           W AM+S +   G+ E AL LF EM    +   D  TF  +L A  +   + LG Q   S 
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQA 460
           +   G    +     ++D+ A++   ++A    K M  E +   W +L+SAC  +G  + 
Sbjct: 494 IQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEF 553

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLS 485
                E + Q   +P++     +LS
Sbjct: 554 GEYVAERLFQ--LEPENAGAFVLLS 576



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 179/359 (49%), Gaps = 5/359 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS   LI+GYV  G L  AR LF+ +  +  VSW  +I GY Q  +F EA   F +M
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +    P+  T   +LS C    +      + + +   G+ S L + N+L+D YCK   
Sbjct: 255 Q-EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            D+AR +F  + +KD +S+N +I G++   L EEA+ LF  M     KP+D TF   L A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373

Query: 184 GVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
              L  + LG+ VHA++ K      N  +  +L+D+Y+K  C+  A ++F  M   +  S
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433

Query: 243 YNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           +N M++ +A +   + +L LF E+     F      F  +LS       + +G Q     
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493

Query: 302 IVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           I    IS +++    ++D+ A+  +FEEA+ +  N+        W +++SA    G +E
Sbjct: 494 IQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/659 (35%), Positives = 372/659 (56%), Gaps = 34/659 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  VF+ + + + + +N +  G A       A+KL+V M  LG  P+ +TF   L +
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L     G Q+H  V+K  +  +++V  +L+ +Y +++ + +A K+F      D VSY
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 244 NVMITCYA----------------------WNE---------QYKESLKLFRELQFTRFD 272
             ++T YA                      WN           YKE+L+LF+E+  T   
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             +    T++S  A    +++GRQ+H+        S +K+ N+L+D Y+KCG  E A  +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  LS+   + W  +I  Y      +EAL LF EM R+  S +  T  SIL A A L ++
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 393 SLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            +G+ +H ++ +   G  +     ++L+DMY+K G ++ A Q F  M  +++ +WNA+I 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A +G A A    F  M ++  +PD ++ + +LSACSH G+++ G   F SMT  YK+ 
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           PK EHY  M+D+L  SG F EAE++++ M  EPD ++W S++ +C++H N+E  +K A  
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LFK+E   +   YV +SNIYA AG+W  V++++  + ++G++KV   S +E+ S VH F 
Sbjct: 493 LFKIEP-NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFI 551

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D+ HP+  EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF 
Sbjct: 552 IGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFG 611

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T   + + ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 612 LISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 233/507 (45%), Gaps = 43/507 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  +  G++       A KL+V M    G  P+  TF  LL
Sbjct: 12  GLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCM-ISLGLLPNSYTFPFLL 70

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD--------------- 125
             C++   + E +Q+H  ++K GY   L +  SL+  Y +   L+               
Sbjct: 71  KSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVV 130

Query: 126 ----------------LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                            AR +F E+P KD VS+NA+I+G+ + G  +EA++LF EM    
Sbjct: 131 SYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN 190

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T    +SA      I LGRQVH+++    F  N+ + NAL+D YSK   +  A 
Sbjct: 191 VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETAC 250

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N++I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 251 GLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLG 310

Query: 290 DLQIGRQIHTQTI-----VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            + IGR IH         VT A S   +  SL+DMY+KCG  E A ++F ++ H S   W
Sbjct: 311 AIDIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVI 403
            AMI  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +  S   
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
                  +     ++D+   SG  K+A +    M  E + V W +L+ AC  +G+ +   
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE 487

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSACS 488
           K  +++ +     P S  LLS + A +
Sbjct: 488 KFAQNLFKIEPNNPGSYVLLSNIYATA 514



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 215/468 (45%), Gaps = 32/468 (6%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   L++GY   G + +AR +F+ +  +  VSW  +I GY +   ++EA +LF +
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T++S  +   +     QVH+ I   G+ S L I N+L+D Y K  
Sbjct: 186 MMKTN-VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG 244

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F  +  KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I +GR +H ++ K          +  +L+D+YSK   +  A ++F  M     
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            ++N MI  +A + +   +  +F  ++          F  LLS  ++   L +GR I   
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRS 424

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 I+ +++    ++D+    G F+EA+E+ + ++     V W +++ A    GN+E
Sbjct: 425 MTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVE 484

Query: 359 E----ALNLF-IE-------MCRANISADQATFASILRASAEL-----------ASLSLG 395
                A NLF IE       +  +NI A    +  + R    L           +S+ + 
Sbjct: 485 LGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEID 544

Query: 396 KQLHSFVIRSGFMSNVFSGSALLD----MYAKSGSLKDAIQTFKEMPE 439
             +H F+I   F         +L+    +  ++G + D  +  +EM E
Sbjct: 545 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEE 592


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/693 (35%), Positives = 385/693 (55%), Gaps = 16/693 (2%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+  TF   L  CS     +    +H   I  G  + L +  +L+D Y K  CL  A  +
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIK--LFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F  MP +D V++NA++ G+A  G+   A+   L ++MQ    +P+  T  A L       
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 189 DIALGRQVHAFVV----------KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            +A G  VHA+ +          K+   + V +  ALLD+Y+K   ++ AR++F  MP  
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + V+++ +I  +    +  ++  LF+ +  Q   F  S    ++ L   A+   L++G Q
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMGEQ 246

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H     +   +++   NSL+ MYAK G  ++A  +F  ++   TV ++A++S YVQ G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEA  +F +M   N+  D AT  S++ A + LA+L  G+  H  VI  G  S     +A
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMYAK G +  + Q F  MP R+IVSWN +I+    +G  +     F +M   G+ PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            V+ + +LSACSH GL+ EG  +F+ M   Y L P+ EHY  MVD+L R G  DEA + +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP   D  +W +++ +CR++KN++  KK +  + ++        +V +SNIY+ AG++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP-EGTGNFVLLSNIYSAAGRF 545

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  ++V+   + +G +K    SW+E+   +H F   D+ HPQ+ EI R+++N++  +KK 
Sbjct: 546 DEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 605

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY+PDTS  L D +EE K ++L  HSE+LAIA+ +++  E   I V KNLR C DCH  I
Sbjct: 606 GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVI 665

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K IS +  R I VRD++RFHHFK+G CSC DFW
Sbjct: 666 KHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 216/459 (47%), Gaps = 16/459 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  L+  YVK   L  A  +F +M  R  V+W  ++ GY+    +  A    + M+    
Sbjct: 48  STALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH 107

Query: 69  S-DPDYVTFATLLSGCSEPDTANELIQVHADII----------KFGYNSILIICNSLVDS 117
              P+  T   LL   ++     +   VHA  I          K      +++  +L+D 
Sbjct: 108 RLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDM 167

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDF 175
           Y K   L  ARRVF  MP ++ V+++ALI GF       +A  LF  M  Q L F  S  
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL-SPT 226

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           + A+AL A   L  + +G Q+HA + K+    ++   N+LL +Y+K   + +A  LF EM
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VSY+ +++ Y  N + +E+  +F+++Q    +       +L+   ++   LQ GR
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
             H   I+    SE  + N+L+DMYAKCGR + ++++F  +     V W  MI+ Y   G
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 406

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSG 414
             +EA  LF+EM       D  TF  +L A +    +  GK   H      G    +   
Sbjct: 407 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 466

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
             ++D+ ++ G L +A +  + MP R ++  W AL+ AC
Sbjct: 467 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 505



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 223/495 (45%), Gaps = 48/495 (9%)

Query: 2   PNQNTVST--------NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQF 53
           PN+N+ S           L+  Y K G+L  AR +F++M  R  V+W+ LIGG+   ++ 
Sbjct: 146 PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM 205

Query: 54  REAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNS 113
            +AF LF  M   G       + A+ L  C+  D      Q+HA + K G ++ L   NS
Sbjct: 206 TQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           L+  Y K   +D A  +F EM  KD+VS++AL++G+ + G  EEA  +F +MQ    +P 
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
             T  + + A   LA +  GR  H  V+         + NAL+D+Y+K   +  +R++F 
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 385

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQ 292
            MP  D VS+N MI  Y  +   KE+  LF E+    F      F  LLS  ++  L ++
Sbjct: 386 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
                H           ++    +VD+ ++ G  +EA E       I ++P  A +  +V
Sbjct: 446 GKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF------IQSMPLRADVRVWV 499

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
                       +  CR   + D     S  R   EL     G    +FV+    +SN++
Sbjct: 500 A----------LLGACRVYKNIDLGKKVS--RMIQELGPEGTG----NFVL----LSNIY 539

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE------ 466
           S +   D  A+   ++  +Q FK+ P  + +  N  + A    G  Q+  +S E      
Sbjct: 540 SAAGRFDEAAEVRIIQK-VQGFKKSPGCSWIEINGSLHAFV--GGDQSHPQSPEIYRELD 596

Query: 467 ----DMVQSGYQPDS 477
                + + GYQPD+
Sbjct: 597 NILVGIKKLGYQPDT 611



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 16/201 (7%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  ++ +  TF   L+A + LA    G+ +H   I +G  +++F  +ALLDMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSV 483
           L DA   F  MP R++V+WNA+++  A +G    A A L S + M     +P++ +L+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ-MQMHRLRPNASTLVAL 119

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----------SMVDILCRSGCFDEAE 533
           L   +  G + +G    ++   +  L P +   +          +++D+  + G    A 
Sbjct: 120 LPLLAQQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 534 KLMAQMPFEPDEIMWSSVINS 554
           ++   MP   +E+ WS++I  
Sbjct: 179 RVFDAMPAR-NEVTWSALIGG 198


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/643 (36%), Positives = 372/643 (57%), Gaps = 4/643 (0%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           IC  LV+ Y K+     A       P    VS+ A I+G A+ G    A+  F  M  LG
Sbjct: 53  ICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLG 112

Query: 170 FKPSDFTFAAALSAGVGLADIA-LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVE 227
            +P+DFTF +A  A       + +G Q+H+  ++  ++  + FV+ A LD+Y K   +  
Sbjct: 113 LRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKL 172

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR LFGEMP  + V++N ++T    + +  E+++ +  L+      +        +  A 
Sbjct: 173 ARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAG 232

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            + L +G Q H   +      +V V NS+VD Y KC    +A+ +F  +   ++V W +M
Sbjct: 233 AMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSM 292

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           ++AY Q G  EEA   ++   R+         +S L   A L  L LG+ LH+  +RS  
Sbjct: 293 VAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCI 352

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
            +N+F  SAL+DMY K G ++DA Q F E P+RN+V+WNA+I   A  GDAQ  L  F+D
Sbjct: 353 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 412

Query: 468 MVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           M++SG   P+ ++L++V+++CS  GL ++G + F +M +++ + P+ EHYA +VD+L R+
Sbjct: 413 MIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRA 472

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  ++A +++  MP  P   +W +++ +C++H   E  + AA++LF+++  +D+  +V +
Sbjct: 473 GMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDP-QDSGNHVLL 531

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           SN++A AG+W   + ++K M+  G++K    SWV  K+ VHVF A D  H   NEI+  +
Sbjct: 532 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 591

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             L ++M+  GY PDT  +L+D +EE K   +  HSE+LA+AF LI  P G PI +MKNL
Sbjct: 592 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNL 651

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH A K IS I GREI VRD++RFHHFK   CSC D+W
Sbjct: 652 RICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 213/429 (49%), Gaps = 6/429 (1%)

Query: 36  TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQV 95
           T VS+T  I G +Q  +   A   F  M   G    D+   +   +  S P  +    Q+
Sbjct: 81  TVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQI 140

Query: 96  HADIIKFGYNSI--LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           H+  I+FGY  +   + C +L D Y K   L LAR +F EMP ++ V++NA++T    +G
Sbjct: 141 HSLAIRFGYLPVDPFVSCAAL-DMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG 199

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              E I+ +  ++  G  P+  +  A  +A  G   ++LG Q H FVVK  F  +V V N
Sbjct: 200 RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN 259

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +++D Y K  C  +AR +F  M   + VS+  M+  YA N   +E+   +   + +  + 
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEP 319

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           + F  S+ L+  A  L L +GR +H   + +   + + VA++LVDMY KCG  E+A++IF
Sbjct: 320 TDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIF 379

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASL 392
                 + V W AMI  Y   G+ + AL +F +M R+  +A +  T  +++ + +     
Sbjct: 380 YETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLT 439

Query: 393 SLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALIS 450
             G +L  +   R G        + ++D+  ++G  + A +  + MP R  +S W AL+ 
Sbjct: 440 KDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLG 499

Query: 451 ACAQNGDAQ 459
           AC  +G  +
Sbjct: 500 ACKMHGKTE 508



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 8/348 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K+G L  AR LF  M +R  V+W  ++       +  E  + +  +R  GG  P+ V+
Sbjct: 164 YFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGL-PNVVS 222

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
                + C+     +   Q H  ++K G+   + + NS+VD Y K RC   AR VF  M 
Sbjct: 223 ACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMG 282

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            ++SVS+ +++  +A+ G  EEA   ++  +  G +P+DF  ++AL+   GL  + LGR 
Sbjct: 283 VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRA 342

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA  V++    N+FVA+AL+D+Y K  CV +A ++F E P+ + V++N MI  YA    
Sbjct: 343 LHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGD 402

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT--QTIVTTAISEVKVA 313
            + +L +F ++   R   +   + TL++V+ +     + +  +   +T+      E +  
Sbjct: 403 AQNALLVFDDM--IRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 460

Query: 314 N--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           +   +VD+  + G  E+A E+   +    ++  W A++ A    G  E
Sbjct: 461 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 508



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 202/441 (45%), Gaps = 14/441 (3%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVK-TNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
            AAA  + +      LGR  HA  ++      + F+   L++LYSK D    A       
Sbjct: 18  LAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASD 77

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IG 294
           P    VSY   I+  A + +   +L  F  +       + F F +     A+      IG
Sbjct: 78  PHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIG 137

Query: 295 RQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
            QIH+  I    +  +  V+ + +DMY K GR + A+ +F  + + + V W A+++  V 
Sbjct: 138 PQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            G   E +  +  +  A    +  +  +   A A    LSLG+Q H FV++ GF  +V  
Sbjct: 198 DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 257

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
            ++++D Y K      A   F  M  RN VSW ++++A AQNG  +    ++    +SG 
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 317

Query: 474 QPDSVSLLSVLSACSHCGLIEEGL-QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
           +P    + S L+ C+  GL+   L +  +++  +  +       +++VD+  + GC ++A
Sbjct: 318 EPTDFMVSSALTTCA--GLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDA 375

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP-YVAMSNIY- 590
           E++  + P + + + W+++I     + ++  A+ A      M +  + AP Y+ + N+  
Sbjct: 376 EQIFYETP-QRNLVTWNAMIGG---YAHIGDAQNALLVFDDMIRSGETAPNYITLVNVIT 431

Query: 591 --AVAGQWESVSQVKKAMRER 609
             +  G  +   ++ + MRER
Sbjct: 432 SCSRGGLTKDGYELFETMRER 452



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 85/160 (53%), Gaps = 1/160 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K      AR +F+ M  R +VSW  ++  Y+Q     EAF  ++  R  G  
Sbjct: 259 NSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE 318

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D++  ++ L+ C+     +    +HA  ++   ++ + + ++LVD Y K  C++ A +
Sbjct: 319 PTDFMV-SSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 377

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           +F E PQ++ V++NA+I G+A  G  + A+ +F +M   G
Sbjct: 378 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG 417



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 1/150 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K G +  A ++F     R  V+W  +IGGY+     + A  +F D
Sbjct: 353 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 412

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKI 121
           M   G + P+Y+T   +++ CS      +  ++   +  +FG          +VD   + 
Sbjct: 413 MIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRA 472

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              + A  V + MP + S+S    + G  K
Sbjct: 473 GMEEQAYEVIQGMPMRPSISVWGALLGACK 502


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 375/659 (56%), Gaps = 34/659 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  VF+ + + + + +N +I G A       ++ L+V M  LG  P+ +TF   L +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVVE- 227
                    G+Q+H  V+K  F  +++V  +L+ +Y               S H  VV  
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 228 ---------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
                          A+KLF E+P  D VS+N MI+ YA    YKE+L+LF E+      
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             +  + T+LS  A+   +++GRQ+H+        S +K+ N+L+D+Y+KCG  E A  +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  LS+   + W  +I  Y      +EAL LF EM R+  + +  T  S+L A A L ++
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 393 SLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            +G+ +H ++ +   G  +     ++L+DMYAK G ++ A Q F  M  +++ SWNA+I 
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A +G A A+   F  M + G +PD ++ + +LSACSH G+++ G   F SMTQ YK+ 
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           PK EHY  M+D+L  SG F EAE+++  M  EPD ++W S++ +C++H N+E A+  A  
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           L K+E   + + Y+ +SNIYA AG+WE V++++  +  + ++KV   S +E+ S V  F 
Sbjct: 494 LIKIEP-ENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFV 552

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D+ HPQ  EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF 
Sbjct: 553 VGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 612

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+ + ++KNLR C +CH A KL+SKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 613 LISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 240/505 (47%), Gaps = 43/505 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  +I G++  +    +  L+V M    G  P+  TF  LL
Sbjct: 13  GLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCM-VSLGLLPNSYTFPFLL 71

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD--------------- 125
             C++  T  E  Q+H  ++K G++  L +  SL+  Y +   L+               
Sbjct: 72  KSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131

Query: 126 ----------------LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                            A+++F E+P KD VS+NA+I+G+A+ G  +EA++LF EM  + 
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN 191

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T+   LSA      I LGRQVH++V    F  N+ + NAL+DLYSK   V  A 
Sbjct: 192 VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETAC 251

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 252 GLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLG 311

Query: 290 DLQIGRQIHTQTI-----VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            + IGR IH         VT A S   +  SL+DMYAKCG  E A ++F ++ H S   W
Sbjct: 312 AIDIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 368

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            AMI  +   G  + + +LF  M +  I  D  TF  +L A +    L LG+ +   + +
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428

Query: 405 SGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
              M+        ++D+   SG  K+A +    M  E + V W +L+ AC  +G+ +   
Sbjct: 429 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAE 488

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSA 486
              +++++     P S  LLS + A
Sbjct: 489 SFAQNLIKIEPENPSSYILLSNIYA 513



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 183/362 (50%), Gaps = 5/362 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G++ +A++LF+ +  +  VSW  +I GY++   ++EA +LF +
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEE 186

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T+ T+LS C+   +     QVH+ +   G++S L I N+L+D Y K  
Sbjct: 187 M-MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I +GR +H ++ K          +  +L+D+Y+K   +  A ++F  M     
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HT 299
            S+N MI  +A + +   S  LF  ++    +     F  LLS  ++   L +GR I  +
Sbjct: 366 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 425

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            T       +++    ++D+    G F+EA+E+   +      V W +++ A    GN+E
Sbjct: 426 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 485

Query: 359 EA 360
            A
Sbjct: 486 LA 487


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/621 (38%), Positives = 373/621 (60%), Gaps = 9/621 (1%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           MP++++VS+  L++G ++  ++ +A+  F  M+  G  P+ F  ++A  A   L     G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+H   V+  F   +FVA+ L D+YSK   + EA ++F +MP+ D V++  MI  YA N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 254 EQYKESLKLFRELQFTRF-DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + ++  FR+++        Q  F ++LS      D  + + IH          EV V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 313 ANSLVDMYAKCGRFEEAKEIFA-NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            N+L+DMYAK    E A  +   +    + V  T+MI  Y++   +EEAL +++E+ R  
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ TF+S+++  A  A L  G QLH+ VI++  + + F GS L+DMY K G +  ++
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F E+  R  ++WNA+I+  AQ+G  +  +++F+ M+ SG +P+ ++ +S+L+ACSH G
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EGL+YF SM + + + PK+EHY+ ++D   R+G  DEA K +++MP +P+   W S+
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 420

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+  + E  + AA  L K+E   +   +V++S IYA  GQWE V  V+K MR+  +
Sbjct: 421 LGACRMRGSKELGEVAAQNLMKLEP-GNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 479

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS---CALHD 668
           +K+  +SWV+   K HVF + D  HPQ  +I  K+E L   +K+EGY PDTS   C L D
Sbjct: 480 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLED 539

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
             +E     L+YHSER+A+AFALI+ P   PI+V KNLR C DCH A K I K+  R+I 
Sbjct: 540 IAKE---RILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 596

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD+SRFHHF +G CSC D+W
Sbjct: 597 VRDNSRFHHFVNGRCSCGDYW 617



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 216/436 (49%), Gaps = 13/436 (2%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  R AVSWT L+ G SQ     +A   F  MR   G  P     ++     +       
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR-AGVAPTRFALSSAARAAAALGAPLP 59

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
             Q+H   ++ G+++ L + ++L D Y K   L  A RVF +MPQKD+V++ A+I G+AK
Sbjct: 60  GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 119

Query: 152 EGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
            G  E A+  F +M+  G   +D   F + LSA  GL D  L + +H  V K  F   V 
Sbjct: 120 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV-----MITCYAWNEQYKESLKLFRE 265
           V NAL+D+Y+K   V  A ++     ++D   +NV     MI  Y   +  +E+L ++ E
Sbjct: 180 VRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVE 235

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           L+    + ++F FS+++   A +  L+ G Q+H Q I T  I +  V ++LVDMY KCG 
Sbjct: 236 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGL 295

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
              + ++F  + + + + W A+I+ + Q G+  EA+  F  M  + I  +   F S+L A
Sbjct: 296 ISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 355

Query: 386 SAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIV 443
            +    +  G K  +S     G        S ++D Y ++G L +A +   EMP + N  
Sbjct: 356 CSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAY 415

Query: 444 SWNALISACAQNGDAQ 459
            W +L+ AC   G  +
Sbjct: 416 GWCSLLGACRMRGSKE 431



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 172/346 (49%), Gaps = 3/346 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G L+ A  +F+ M  + AV+WT +I GY++      A   F DM+ +G    D   
Sbjct: 86  YSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV 145

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F ++LS             +H  + K G+   + + N+L+D Y K   ++ A RV K  P
Sbjct: 146 FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 205

Query: 136 QK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
              + VS  ++I G+ +    EEA+ ++VE++  G +P++FTF++ +      A +  G 
Sbjct: 206 GGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGA 265

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+HA V+KT+ + + FV + L+D+Y K   +  + +LF E+     +++N +I  +A + 
Sbjct: 266 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHG 325

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             +E+++ F  + ++    +   F +LL+  ++   +  G +          I   +   
Sbjct: 326 HGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHY 385

Query: 315 S-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           S ++D Y + GR +EA +  + +    +   W +++ A   +G+ E
Sbjct: 386 SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 431



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 15/235 (6%)

Query: 10  NMLISGYVKSGNLATA-RELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           N LI  Y KS ++ +A R L         VS T +I GY + +   EA  ++V++R  G 
Sbjct: 182 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG- 240

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +P+  TF++++ GC+      +  Q+HA +IK        + ++LVD Y K   + L+ 
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVG 186
           ++F E+  +  +++NA+I  FA+ G   EAI+ F  M + G +P+   F + L+A    G
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 187 LADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           L D  L      ++ H    K          + ++D Y +   + EA K   EMP
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEHY------SCIIDTYGRAGRLDEAYKFISEMP 409


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 373/659 (56%), Gaps = 38/659 (5%)

Query: 123 CL-DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
           CL  L RR F   P   S    A  T    +G  ++A   F    H+  +PS   F+  L
Sbjct: 5   CLRPLTRRHFSTNPSSGS-ELTAEFTNLCSKGHLKQAFDRFS--SHIWSEPS--LFSHLL 59

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV---------------- 225
            + +    ++LG+Q+H+ ++ +    + F++N LL+LYSK   +                
Sbjct: 60  QSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIM 119

Query: 226 ---------------VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                          V ARK+F EMPE +  ++N M+      E  +E L LF  +    
Sbjct: 120 SCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELG 179

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           F   +F   ++L   A    L  GRQ+H           + V +SL  MY KCG   E +
Sbjct: 180 FLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGE 239

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +   +   + V W  +I+   Q G  EE L+ +  M  A    D+ TF S++ + +ELA
Sbjct: 240 RLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELA 299

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L  G+Q+H+ VI++G    V   S+L+ MY++ G L+ +++ F E    ++V W+++I+
Sbjct: 300 TLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIA 359

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           A   +G     +  F  M Q   + + V+ LS+L ACSHCGL E+G+++F+ M +KY ++
Sbjct: 360 AYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVK 419

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ EHY  MVD+L R G  +EAE L+  MP + D I W +++++C+IHK  E A++ +++
Sbjct: 420 PRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEE 479

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           +F+++  RD  PYV +SNI+A   +W+ VS V+KAMR+R ++K    SW+E+K+++H F 
Sbjct: 480 VFRLDP-RDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFC 538

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D+ HP++ EI   +  L  EMKK GY PD    LHD D E K  SL +HSE+LAIAFA
Sbjct: 539 MGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFA 598

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           L+ TP G+PI V+KNLR C+DCH AIK IS+I+ REI VRDSSRFHHFK+G CSC D+W
Sbjct: 599 LLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 11/437 (2%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT--FA 77
           G+L  A + F+S +      ++ L+     +N      +L   + T G S   +++    
Sbjct: 35  GHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLL 94

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
            L S C + DTA  L  V            ++ CN L++ Y +      AR++F EMP++
Sbjct: 95  NLYSKCGQLDTAITLFGVMP-------RKNIMSCNILINGYFRSGDWVTARKMFDEMPER 147

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           +  ++NA++ G  +   NEE + LF  M  LGF P +F   + L    GL  +  GRQVH
Sbjct: 148 NVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVH 207

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
            +V K  F  N+ V ++L  +Y K   + E  +L   MP  + V++N +I   A N   +
Sbjct: 208 GYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPE 267

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E L  +  ++   F   +  F +++S  +    L  G+QIH + I   A   V V +SL+
Sbjct: 268 EVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLI 327

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MY++CG  E + ++F    +   V W++MI+AY   G   EA++LF +M +  + A+  
Sbjct: 328 SMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDV 387

Query: 378 TFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           TF S+L A +       G +    ++ + G    +   + ++D+  + GS+++A    + 
Sbjct: 388 TFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRS 447

Query: 437 MPER-NIVSWNALISAC 452
           MP + ++++W  L+SAC
Sbjct: 448 MPVKADVITWKTLLSAC 464



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 178/352 (50%), Gaps = 3/352 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N +S N+LI+GY +SG+  TAR++F+ M +R   +W  ++ G  Q     E   LF
Sbjct: 113 MPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLF 172

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  PD     ++L GC+         QVH  + K G+   L++ +SL   Y K
Sbjct: 173 SRM-NELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMK 231

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L    R+ + MP ++ V++N LI G A+ G  EE +  +  M+  GF+P   TF + 
Sbjct: 232 CGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSV 291

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G+Q+HA V+K      V V ++L+ +YS+  C+  + K+F E    D 
Sbjct: 292 ISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDV 351

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V ++ MI  Y ++ +  E++ LF +++  + + +   F +LL   ++    + G +    
Sbjct: 352 VCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDL 411

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            +    +   ++    +VD+  + G  EEA+ +  ++      + W  ++SA
Sbjct: 412 MVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/622 (38%), Positives = 365/622 (58%), Gaps = 23/622 (3%)

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDF--TFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           A +G    AI LF++M+      S    +  AAL +  GL    L   +HA  +++    
Sbjct: 23  ASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFA 82

Query: 208 NVFVANALLDLYSK-------------------HDCVVEA-RKLFGEMPEVDGVSYNVMI 247
           + F ANALL+L  K                        E+ RK+F EM E D VS+N +I
Sbjct: 83  DRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLI 142

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              A +++++E+L + RE+    F    F  ST+L + A   D++ G  +H   I     
Sbjct: 143 LGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFD 202

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++V V +SL+DMYA C + + + ++F + S    V W +M++ Y Q G++EEAL +F  M
Sbjct: 203 NDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRM 262

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +A +     TF+S++ A   L+ L LGKQLH+++IR+ F  N+F  S+L+DMY K G++
Sbjct: 263 LQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNV 322

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A + F  +   +IVSW A+I   A +G        FE M     +P+ ++ L+VL+AC
Sbjct: 323 DIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTAC 382

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++ G +YFNSM+ +Y   P  EH A++ D L R+G  DEA   +++M  +P   +
Sbjct: 383 SHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSV 442

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           WS+++ +CR+HKN   A++ A ++F++E  +    +V +SN+Y+ +G+W   +Q++K+MR
Sbjct: 443 WSTLLRACRVHKNTVLAEEVAKKIFELEP-KSMGSHVILSNMYSASGRWNEAAQLRKSMR 501

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            +G++K  A SW+E+K+K+HVF A+D+ HP  + I   +    ++M ++GY P+    L 
Sbjct: 502 IKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQ 561

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D +EE K E L  HSE+LAI F +I+TP G+ I VMKNLR C DCH A K ISKI  REI
Sbjct: 562 DIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFISKIVAREI 621

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD +RFH FKDG CSC DFW
Sbjct: 622 VVRDVNRFHRFKDGNCSCGDFW 643



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 200/437 (45%), Gaps = 23/437 (5%)

Query: 39  SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDY-VTFATLLSGCSEPDTANELIQVHA 97
           SW   I   + + QF  A  LF+ MR           +    L  C+          +HA
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 98  DII-------KFGYNSILIICNSLV-------------DSYCKIRCLDLARRVFKEMPQK 137
             I       +F  N++L +C  L              +   +    +  R+VF EM ++
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           D+VS+N LI G A+   ++EA+ +  EM   GF P  FT +  L      ADI  G  VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
            + +K  F  +VFV ++L+D+Y+    +  + K+F    + D V +N M+  YA N   +
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E+L +FR +           FS+L+    N   L++G+Q+H   I       + +++SL+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 313

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMY KCG  + A+ +F  +     V WTAMI  Y   G   EA  LF  M   N+  +  
Sbjct: 314 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 373

Query: 378 TFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           TF ++L A +    +  G K  +S   + GF+ ++   +AL D   ++G L +A     E
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 433

Query: 437 MPERNIVS-WNALISAC 452
           M  +   S W+ L+ AC
Sbjct: 434 MKIKPTSSVWSTLLRAC 450



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 39/425 (9%)

Query: 15  GYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYV 74
           G ++S    + R++F+ M++R AVSW  LI G ++  + +EA  +  +M  DG   PD  
Sbjct: 113 GGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFM-PDTF 171

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T +T+L   +E       + VH   IK G+++ + + +SL+D Y     +D + +VF   
Sbjct: 172 TLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSF 231

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
              D+V +N+++ G+A+ G  EEA+ +F  M   G +P   TF++ + A   L+ + LG+
Sbjct: 232 SDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGK 291

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+HA++++  F +N+F++++L+D+Y K   V  AR++F  +   D VS+  MI  YA + 
Sbjct: 292 QLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHG 351

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+  LF  ++      +   F  +L+  ++   +  G                K  N
Sbjct: 352 PTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGW---------------KYFN 396

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           S+ + Y              +L H +     A+     + G+L+EA N   EM    I  
Sbjct: 397 SMSNQYG----------FVPSLEHCA-----ALADTLGRAGDLDEAYNFISEM---KIKP 438

Query: 375 DQATFASILRASAELASLSLGKQLHS--FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             + ++++LRA     +  L +++    F +    M    S   L +MY+ SG   +A Q
Sbjct: 439 TSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMG---SHVILSNMYSASGRWNEAAQ 495

Query: 433 TFKEM 437
             K M
Sbjct: 496 LRKSM 500



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 4/226 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y     +  + ++F+S  D  AV W  ++ GY+Q     EA  +F  M    G  P
Sbjct: 211 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRM-LQAGVRP 269

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
             VTF++L+             Q+HA +I+  +N  + I +SL+D YCK   +D+ARRVF
Sbjct: 270 VPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF 329

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
             +   D VS+ A+I G+A  G   EA  LF  M+    KP+  TF A L+A    GL D
Sbjct: 330 NGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVD 389

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               +  ++   +  FV ++    AL D   +   + EA     EM
Sbjct: 390 NGW-KYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEM 434



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 2/140 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N   ++ LI  Y K GN+  AR +FN +     VSWT +I GY+      EAF LF  
Sbjct: 303 NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFER 362

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKI 121
           M   G   P+++TF  +L+ CS     +   +    +  ++G+   L  C +L D+  + 
Sbjct: 363 MEL-GNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 421

Query: 122 RCLDLARRVFKEMPQKDSVS 141
             LD A     EM  K + S
Sbjct: 422 GDLDEAYNFISEMKIKPTSS 441


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/596 (38%), Positives = 370/596 (62%), Gaps = 7/596 (1%)

Query: 157 EAIKLFVEMQHLGFKPSDF-TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           EA++LF  ++  G    D  T+ A +SA +GL  I   ++V  +++ +    + ++ N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           L ++ K   +++AR+LF EMPE + +S+N +I        Y E+ +LF  +     D   
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             F T++   A    +  GRQ+H+ ++ T    +V VA +L+DMY+KCG  E+A+ +F  
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   +TV W ++I+ Y   G  EEAL+++ EM  + +  D  TF+ I+R  A LASL   
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQ H+ ++R GF  ++ + +AL+D+Y+K G ++DA   F  MP +N++SWNALI+    +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G     ++ FE M+  G  P+ V+ L+VLSACS+ GL + G + F SM++ +K++P+  H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM- 574
           YA M+++L R G  DEA  L+   PF+P   MW++++ +CR+HKN E  K AA++L+ M 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 575 -EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
            EKL +   YV + NIY  +G+ E  + V + ++ RG+R + A SW+E+K + + F + D
Sbjct: 533 PEKLSN---YVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
           + H Q+ EI +K++ LM E+ K GY P     L D DE+ +   L YHSE+LAIAF LIN
Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQ-EERVLLYHSEKLAIAFGLIN 648

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           T + +P+ ++++ R C DCH+AIKLI+ +T REI VRD+SRFHHFKDG CSC D+W
Sbjct: 649 TSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 223/458 (48%), Gaps = 5/458 (1%)

Query: 52  QFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
           ++ EA +LF  +  +G  D D  T+  L+S C    +   + +V   +I  G +    + 
Sbjct: 110 RYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N ++  + K   +  ARR+F EMP+K+ +S+N +I G    G   EA +LF+ M      
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSD 229

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
                F   + A  GL  I  GRQ+H+  +KT    +VFVA AL+D+YSK   + +A+ +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +MPE   V +N +I  YA +   +E+L ++ E++ +      F FS ++ + A    L
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           +  +Q H   +      ++    +LVD+Y+K GR E+AK +F  + H + + W A+I+ Y
Sbjct: 350 EHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGY 409

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G   EA+ +F  M    +  +  TF ++L A +       G ++   + R       
Sbjct: 410 GNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPR 469

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMV 469
               + ++++  + G L +A    K+ P +  V+ W AL++AC  + + +  L  F    
Sbjct: 470 AMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFE--LGKFAAEK 527

Query: 470 QSGYQPDSVS-LLSVLSACSHCGLIEEGLQYFNSMTQK 506
             G  P+ +S  + +L+  +  G +EE      ++ ++
Sbjct: 528 LYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRR 565



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 209/446 (46%), Gaps = 43/446 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR LF+ M ++  +SW  +IGG      + EAF+LF+ M  D  S
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDF-S 228

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D     F T++   +         Q+H+  +K G    + +  +L+D Y K   ++ A+ 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC 288

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +MP+K +V +N++I G+A  G +EEA+ ++ EM+  G K  +FTF+  +     LA 
Sbjct: 289 VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +Q HA +V+  F  ++    AL+DLYSK   + +A+ +F  MP  + +S+N +I  
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + +  E++++F  +       +   F  +LS  +       G +I         I  
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEM 367
             +  + ++++  + G  +EA  +  +     TV  W A+++A                 
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA----------------- 511

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           CR + + +   FA      AE       ++L ++V+             LL++Y +SG L
Sbjct: 512 CRVHKNFELGKFA------AEKLYGMGPEKLSNYVV-------------LLNIYNRSGRL 552

Query: 428 KDAIQTFKEMPERNIVSWNALISACA 453
           ++A    + +  R +     ++ AC+
Sbjct: 553 EEAAAVIQTLKRRGL----RMLPACS 574



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 34/190 (17%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K G +  A+ +F+ M  +  +SW  LI GY    +  EA ++F  M 
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML 426

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G   P++VTF  +LS CS    ++   ++   + +              D   K R +
Sbjct: 427 HEGMV-PNHVTFLAVLSACSYSGLSDRGWEIFESMSR--------------DHKIKPRAM 471

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A                 +I    +EGL +EA   F  ++   FKP+   +AA L+A 
Sbjct: 472 HYA----------------CMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLTAC 512

Query: 185 VGLADIALGR 194
               +  LG+
Sbjct: 513 RVHKNFELGK 522


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/747 (34%), Positives = 410/747 (54%), Gaps = 18/747 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y++ G+L +A ++F+ +  ++ V WT+LI  Y  +     A  LF  +  +G +  
Sbjct: 68  LVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA-L 126

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D + F ++LS CS  +       +H   ++ G     I+ ++LV  Y +   L  A  +F
Sbjct: 127 DAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALF 186

Query: 132 KEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
             + +  D V +NA+IT  ++ G   EA+++F  M  LG  P   TF +   A      +
Sbjct: 187 GHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL 246

Query: 191 ALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
                +  H  + +T    +V VA AL++ Y++   +  AR+ F  MPE + VS+  MI 
Sbjct: 247 RASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIA 306

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A    +  +++ F  +       ++   STL + +    DL   R +          +
Sbjct: 307 AFA-QIGHLLAVETFHAMLLEGVVPTR---STLFAALEGCEDLHTARLVEAIAQEIGVAT 362

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW-----TAMISAYVQKGNLEEALNL 363
           +V +   LV  YA+C   E+A  +F   S      W     TAMI+ Y Q  +      L
Sbjct: 363 DVAIVTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKL 419

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYA 422
           +       IS D+  + + L A A LA+LS G+Q+H+ V     +  +V  G+A++ MY 
Sbjct: 420 WGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYG 479

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           + GSL+DA   F  MP R+ +SWNA++SA AQ+G  +     F  M+Q G+  + V+ L+
Sbjct: 480 QCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLN 539

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +LSAC+H GL+E G ++F++MT  + + P  EHY  MVD+L R G   +A  ++  MP  
Sbjct: 540 LLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVP 599

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD   W +++ +CRI+ + E  + AA+++ ++ +    A YVA+ NIY+ AG+WE  + V
Sbjct: 600 PDAATWMALMGACRIYGDTERGRFAAERVLEL-RANHTAAYVALCNIYSAAGRWEDAAAV 658

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K M + G+RK+   S +E++SKVH F   D  HPQ+  I  ++E +M  +++ GY+  T
Sbjct: 659 RKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVT 718

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
              LHD +EE K + L++HSE+LAIAF +++TP+GS + V+KNLR C DCH A K ISK+
Sbjct: 719 GEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKV 778

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
            GREI VRD  RFHHFKDG CSC D+W
Sbjct: 779 FGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 131/243 (53%), Gaps = 3/243 (1%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A+SLV MY +CG  E A ++F  ++H S V WT +ISAYV +G+   A+ LF  + +  
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ D   F S+L A +    L+ G+ +H   + +G        SAL+ MY + GSL+DA 
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183

Query: 432 QTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
             F  +    ++V WNA+I+A +QNG  +  L+ F  M+Q G  PD V+ +SV  ACS  
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243

Query: 491 -GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
             L    ++ F++   +  L        ++V+   R G  D A +  A MP E + + W+
Sbjct: 244 PSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMP-ERNAVSWT 302

Query: 550 SVI 552
           S+I
Sbjct: 303 SMI 305



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 5/319 (1%)

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKL 231
           S F  AAA+        IA G+ +H+ +  +  +  + ++A++L+ +Y +   +  A  +
Sbjct: 25  SSFDSAAAVRLVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDV 84

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F ++     V + V+I+ Y        ++ LF  +           F ++LS  +++  L
Sbjct: 85  FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             GR IH   +      +  VA++LV MY +CG   +A  +F +L  H+  V W AMI+A
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL--SLGKQLHSFVIRSGFM 408
             Q G+  EAL +F  M +  I  D  TF S+ +A +   SL  S  K  H+ +  +G  
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLG 264

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
           S+V   +AL++ YA+ G +  A + F  MPERN VSW ++I+A AQ G   A +++F  M
Sbjct: 265 SDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLA-VETFHAM 323

Query: 469 VQSGYQPDSVSLLSVLSAC 487
           +  G  P   +L + L  C
Sbjct: 324 LLEGVVPTRSTLFAALEGC 342



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 188/435 (43%), Gaps = 43/435 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             + V    L++ Y + G +  ARE F +M +R AVSWT +I  ++Q      A + F  
Sbjct: 264 GSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHA 322

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G  P   T    L GC +  TA  L++  A   + G  + + I   LV +Y +  
Sbjct: 323 MLLE-GVVPTRSTLFAALEGCEDLHTAR-LVEAIAQ--EIGVATDVAIVTDLVMAYARCD 378

Query: 123 CLDLARRVF--KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             + A RVF  +E  + D+    A+I  +A+        KL+      G  P    +  A
Sbjct: 379 GQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITA 438

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A   LA ++ GRQ+HA V     ++ +V + NA++ +Y +   + +AR  F  MP  D
Sbjct: 439 LDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARD 498

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIH 298
            +S+N M++  A + + ++   LFR +    FD  +  F  LLS  A+   ++ G     
Sbjct: 499 EISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFS 558

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-----WTAMISAYVQ 353
             T     +   +    +VD+  + GR  +A  I   +     VP     W A++ A   
Sbjct: 559 AMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM----PVPPDAATWMALMGACRI 614

Query: 354 KGNLEE---ALNLFIEMCRANISADQATFASI---------------------LRASAEL 389
            G+ E    A    +E+ RAN +A      +I                     LR    +
Sbjct: 615 YGDTERGRFAAERVLEL-RANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGV 673

Query: 390 ASLSLGKQLHSFVIR 404
           +S+ +  ++H FV+R
Sbjct: 674 SSIEIRSKVHEFVVR 688


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/777 (33%), Positives = 416/777 (53%), Gaps = 39/777 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LIS Y+K G +  A ++F+ +     VS+T LI G+S+ +   EA +LF  M  D G 
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM-LDSGI 192

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P+  TF  +L+ C          QVH  ++K G  S + ICN+L+  YCK   LDL  R
Sbjct: 193 EPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLR 252

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLA 188
           +F+EMP++D  S+N +I+   KE   +EA   F  MQ   G K   F+ +  L+A  G  
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSK----------------HDCVV------ 226
               G+Q+HA  +K     ++ V+++L+  Y+K                 D +       
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 227 ---------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                     A ++F +MP+ + +SYN ++   + N+    +L+LF E+     + S   
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF--AN 335
            +++++        ++ +QI    +    +S   +  +LVDMY +CGR E+A++IF   +
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIE-MCRANISADQATFASILRASAELASLSL 394
           L +  T   T+MI  Y + G L EA++LF        I  D+    SIL     +    +
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G Q+H   ++SG ++    G+A + MY+K  ++ DA++ F  M  ++IVSWN L++    
Sbjct: 553 GMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVL 612

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC--GLIEEGLQYFNSMTQKYKLRPK 512
           +      L  ++ M ++G +PDS++   ++SA  H    L++     F SM  ++ ++P 
Sbjct: 613 HWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPT 672

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHYAS + +L R G  +EAE+ +  MP EPD  +W +++NSCRI+KN    K AA  + 
Sbjct: 673 LEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNIL 732

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            +E  +D   Y+  SN+Y+ +G+W    +V++ MRE+G RK  + SW+  ++K+H F A 
Sbjct: 733 AVEP-KDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYAR 791

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D  HPQ  +I   +E L+ E  K GY PDTS  L + +E  K E L YHS +LA  F ++
Sbjct: 792 DRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGIL 851

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T  G PI ++KN+R C DCH  +K +S +T R+I +RD+S FH F DG CSC D+W
Sbjct: 852 MTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 169/360 (46%), Gaps = 14/360 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++   +I+ Y++ G L +A E+FN M  R  +S+  ++ G S+ +    A +LF
Sbjct: 359 MPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELF 418

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           ++M  +G    D  T  ++++ C    +     Q+   ++KFG  S   I  +LVD Y +
Sbjct: 419 IEMLEEGVEISD-CTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTR 477

Query: 121 IRCLDLARRVF--KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
              ++ A ++F  + +    +    ++I G+A+ G   EAI LF   Q  G    D   +
Sbjct: 478 CGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMS 537

Query: 179 A---ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               +L   +G  +  +G Q+H   +K+  +    V NA + +YSK   + +A ++F  M
Sbjct: 538 TSILSLCGSIGFHE--MGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTM 595

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VS+N ++  +  + Q  ++L ++++++          F+ ++S   +  +L +  
Sbjct: 596 NMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHT-ELNLVD 654

Query: 296 QIHTQTIVTTAISEVKVA----NSLVDMYAKCGRFEEAKEIFANLSHISTV-PWTAMISA 350
              +  +       +K       S + +  + G  EEA++   N+     V  W A++++
Sbjct: 655 SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 351/578 (60%), Gaps = 2/578 (0%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+   + + ++A     ++A  R +H+ + ++    + F+ N+L+ +Y K   V +AR +
Sbjct: 60  PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  +P  D VS+  +IT YA N+   E+L L  ++   RF  S F F++ L         
Sbjct: 120 FDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            IG Q+H   +      +V V ++L+DMYA+C + + A  +F  L   + V W A+I+ +
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            +KG+ E  L  F EM R    A   T++S+  A A + +L  G+ +H+ +I+SG     
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTA 299

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F  + +L MYAKSGS+ DA + F  + +R++V+WN +++A AQ G  +  +  FE++ + 
Sbjct: 300 FVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKY 359

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G Q + ++ LSVL+ACSH GL++EG QYF+ M + Y + P+ +HY S VD+L R+G   E
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAGLLKE 418

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D  P V + NIYA
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDP-EDTGPPVLLYNIYA 477

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             GQW+  ++V+K M+  GV+K  A SWVE+++ VH+F A+D  HP++ EI R  E +  
Sbjct: 478 STGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNT 537

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            +KK GY P+T   L    E+ +   L+YHSE++A+AFALIN P G+ I +MKN+R C D
Sbjct: 538 RIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGD 597

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+A + +S++  REI VRD++RFHHF +G CSC D+W
Sbjct: 598 CHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 202/400 (50%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+   G   P    + ++++ C++         +H+ + +        + NSL+  YCK
Sbjct: 50  LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF  +P +D VS+  LITG+A+  +  EA+ L  +M    F+PS FTF + 
Sbjct: 110 CGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSF 169

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A        +G Q+HA  VK N  E+V+V +ALLD+Y++   +  A ++F  +   + 
Sbjct: 170 LKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNE 229

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  +A     + +L  F E+Q   F  + F +S++ S +A    L+ GR +H  
Sbjct: 230 VSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAH 289

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +       VAN+++ MYAK G   +A+++F  +     V W  M++A+ Q G  +EA
Sbjct: 290 MIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEA 349

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +  F E+ +  I  +Q TF S+L A +    +  GKQ    +        +    + +D+
Sbjct: 350 VAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDL 409

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G LK+A+    +MP E     W AL+ AC  + +A+
Sbjct: 410 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 449



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 175/342 (51%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G ++ AR +F+ +  R  VSWT LI GY+Q +   EA  L  DM      
Sbjct: 101 NSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDM-LRARF 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P   TF + L             Q+HA  +K+  +  + + ++L+D Y + + +D+A R
Sbjct: 160 RPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIR 219

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  +  K+ VS+NALI GFA++G  E  +  F EMQ  GF  + FT+++  SA   +  
Sbjct: 220 VFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGA 279

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR VHA ++K+      FVAN +L +Y+K   +V+ARK+F  + + D V++N M+T 
Sbjct: 280 LEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTA 339

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A     KE++  F E++      +Q  F ++L+  ++   ++ G+Q            E
Sbjct: 340 FAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPE 399

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           +    S VD+  + G  +EA   +F      +   W A++ A
Sbjct: 400 IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 441


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/667 (35%), Positives = 393/667 (58%), Gaps = 3/667 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI  Y K+GB+  AR +F+ ++++TAV+WT +I GY++  +   + +LF  
Sbjct: 69  DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR +    PD    +++LS CS  +      Q+HA +++ G    + + N L+D Y K  
Sbjct: 129 MR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 187

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +   R++F +M  K+ +S+  +I+G+ +   + EA+KLF EM  LG+KP  F   + L+
Sbjct: 188 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 247

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L  +  GRQVHA+ +K N   N FV N L+D+Y+K + + +A+K+F  M E + +S
Sbjct: 248 SCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           YN MI  Y+  E+  E+L+LF E++   F  S   F +LL V A+   L++ +QIH   I
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 367

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 ++   ++L+D+Y+KC   ++A+ +F  ++    V W AM   Y Q    EEAL 
Sbjct: 368 KXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 427

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L+  +  +    ++ TFA+++ A++ LASL  G+Q H+ +++ G     F  +AL+DMYA
Sbjct: 428 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 487

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GS+++A + F     R++V WN++IS  AQ+G+A+  L  F +M++ G QP+ V+ ++
Sbjct: 488 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 547

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH G +E+GL +FNSM   + ++P  EHYA +V +L RSG   EA++ + +MP E
Sbjct: 548 VLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIE 606

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P  I+W S++++CRI  N+E  K AA+     +  +D+  Y+ +SNI+A  G W  V +V
Sbjct: 607 PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDP-KDSGSYILLSNIFASKGMWADVKKV 665

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M    V K    SW+E+ +KV+VF A    H + + I   ++ L+Q +K  GY PD 
Sbjct: 666 RDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPDA 725

Query: 663 SCALHDE 669
           +  L ++
Sbjct: 726 TALLMND 732



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 298/572 (52%), Gaps = 7/572 (1%)

Query: 46  GYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
           GYS+     EA  +FVD++   G  P+    A+++  C++     +  Q+H  +++ G++
Sbjct: 15  GYSE-----EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFD 69

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
             + +  SL+D Y K   +++AR VF ++ +K +V++  +I G+ K G +  +++LF +M
Sbjct: 70  QDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQM 129

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           +     P  +  ++ LSA   L  +  G+Q+HA+V++     +V V N L+D Y+K + V
Sbjct: 130 RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRV 189

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
              RKLF +M   + +S+  MI+ Y  N    E++KLF E+    +    F  +++L+  
Sbjct: 190 KAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSC 249

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
            +   L+ GRQ+H  TI     S   V N L+DMYAK     +AK++F  ++  + + + 
Sbjct: 250 GSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYN 309

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           AMI  Y  +  L EAL LF EM          TF S+L  SA L +L L KQ+H  +I+ 
Sbjct: 310 AMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKX 369

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           G   ++F+GSAL+D+Y+K   +KDA   F+EM E++IV WNA+     Q+ + +  LK +
Sbjct: 370 GVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLY 429

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
             +  S  +P+  +  ++++A S+   +  G Q+ N +  K  L        ++VD+  +
Sbjct: 430 STLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAK 488

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
            G  +EA K+     +  D + W+S+I++   H   E A     ++ K     +   +VA
Sbjct: 489 CGSIEEARKMFNSSIWR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 547

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           + +  + AG  E       +M   G++  T +
Sbjct: 548 VLSACSHAGXVEDGLNHFNSMPGFGIKPGTEH 579



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 267/546 (48%), Gaps = 54/546 (9%)

Query: 152 EGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           EG +EEA+ +FV++Q   G  P++F  A+ + A   L  +  G Q+H FVV++ F ++V+
Sbjct: 14  EGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVY 73

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V  +L+D YSK+  +  AR +F ++ E   V++  +I  Y    +   SL+LF +++ T 
Sbjct: 74  VGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               ++  S++LS  +    L+ G+QIH   +      +V V N L+D Y KC R +  +
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  +   + + WT MIS Y+Q     EA+ LF EM R     D     S+L +   L 
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L  G+Q+H++ I++   SN F  + L+DMYAKS  L DA + F  M E+N++S+NA+I 
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEG--L 497
             +        L+ F +M    + P  ++ +S+L   +           H  +I+ G  L
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373

Query: 498 QYF--NSMTQKYK----LRPKKEHYASM--VDILCRSGCF---------DEAEKLMAQMP 540
             F  +++   Y     ++  +  +  M   DI+  +  F         +EA KL + + 
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 541 F---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV--AMSNIYAVAGQ 595
           F   +P+E  ++++I +     +L   ++  +QL KM    D  P+V  A+ ++YA  G 
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMG--LDFCPFVTNALVDMYAKCG- 490

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
             S+ + +K       R V    W  + S           H Q  E    +  + +EM K
Sbjct: 491 --SIEEARKMFNSSIWRDVVC--WNSMIST----------HAQHGEAEEAL-GMFREMMK 535

Query: 656 EGYKPD 661
           EG +P+
Sbjct: 536 EGIQPN 541


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/557 (40%), Positives = 341/557 (61%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
            +  H  +++ +   +V + N L++ YSK   V  AR++F  M E   VS+N MI  Y  
Sbjct: 80  AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N    E+L +F E++   F  S+F  S++LS      D    +++H  ++ T     + V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+D+YAKCG  ++A ++F ++   S+V W++M++ YVQ  N EEAL L+    R ++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             +Q T +S++ A + LA+L  GKQ+H+ + +SGF SNVF  S+ +DMYAK GSL+++  
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F E+ E+N+  WN +IS  A++   +  +  FE M Q G  P+ V+  S+LS C H GL
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +EEG ++F  M   Y L P   HY+ MVDIL R+G   EA +L+  +PF+P   +W S++
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCR++KNLE A+ AA++LF++E   +A  +V +SNIYA   QWE +++ +K +R+  V+
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEP-ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           KV   SW+++K KVH F+  +  HP+  EI   ++NL+ + +K GYKP     LHD +  
Sbjct: 499 KVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIG 558

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            K E L  HSE+LA+ F L+  PE SP+ +MKNLR C DCH  +K  S  T R I VRD 
Sbjct: 559 KKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDV 618

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHF DG CSC DFW
Sbjct: 619 NRFHHFSDGHCSCGDFW 635



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 200/376 (53%), Gaps = 2/376 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           +L  C+      E    H  II+      + + N L+++Y K   ++LAR+VF  M ++ 
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N +I  + +  +  EA+ +F+EM++ GFK S+FT ++ LSA     D    +++H 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
             VKT    N++V  ALLDLY+K   + +A ++F  M +   V+++ M+  Y  N+ Y+E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L L+R  Q    +++QF  S+++   +N   L  G+Q+H     +   S V VA+S VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG   E+  IF+ +   +   W  +IS + +    +E + LF +M +  +  ++ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366

Query: 379 FASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F+S+L        +  G++    +  + G   NV   S ++D+  ++G L +A +  K +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426

Query: 438 PERNIVS-WNALISAC 452
           P     S W +L+++C
Sbjct: 427 PFDPTASIWGSLLASC 442



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 194/353 (54%), Gaps = 3/353 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI+ Y K G +  AR++F+ M++R+ VSW  +IG Y++     EA  +F++MR +G  
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ T +++LS C     A E  ++H   +K   +  L +  +L+D Y K   +  A +
Sbjct: 160 FSEF-TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF+ M  K SV++++++ G+ +    EEA+ L+   Q +  + + FT ++ + A   LA 
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+Q+HA + K+ F  NVFVA++ +D+Y+K   + E+  +F E+ E +   +N +I+ 
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A + + KE + LF ++Q      ++  FS+LLSV  +   ++ GR+       T  +S 
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             V  S +VD+  + G   EA E+  ++    T   W +++++     NLE A
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 162/329 (49%), Gaps = 15/329 (4%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L + A    +   +  H + I      +V + N L++ Y+KCG  E A+++F  +   S
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W  MI  Y +     EAL++F+EM        + T +S+L A          K+LH 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             +++    N++ G+ALLD+YAK G +KDA+Q F+ M +++ V+W+++++   QN + + 
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  +    +   + +  +L SV+ ACS+   + EG Q  +++  K          +S V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAV 305

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ--LFKMEKLR 578
           D+  + G   E+  + +++  E +  +W+++I+         FAK A  +  +   EK++
Sbjct: 306 DMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISG--------FAKHARPKEVMILFEKMQ 356

Query: 579 DAAPY---VAMSNIYAVAGQWESVSQVKK 604
               +   V  S++ +V G    V + ++
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 69/253 (27%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G+L  +  +F+ + ++    W  +I G+++  + +E   LF  M+ D G  P+ VT
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVT 366

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F++LLS C            H  +++ G                  R   L R  +   P
Sbjct: 367 FSSLLSVCG-----------HTGLVEEGR-----------------RFFKLMRTTYGLSP 398

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             + V ++ ++    + GL  EA +L   ++ + F P+   + + L++     ++ L   
Sbjct: 399 --NVVHYSCMVDILGRAGLLSEAYEL---IKSIPFDPTASIWGSLLASCRVYKNLELAE- 452

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
                                         V A KLF   PE  G ++ ++   YA N+Q
Sbjct: 453 ------------------------------VAAEKLFELEPENAG-NHVLLSNIYAANKQ 481

Query: 256 YKE---SLKLFRE 265
           ++E   S KL R+
Sbjct: 482 WEEIAKSRKLLRD 494


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/658 (36%), Positives = 369/658 (56%), Gaps = 36/658 (5%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++F  +PQ D  + + LI+     GL+ EAIK++  +Q  G KP    F AA  A   
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 176

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             D    ++VH    +   + +VFV NAL+  Y K  CV  AR++F ++   D VS+  +
Sbjct: 177 SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 236

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +CY      ++ + +FRE+ ++    +    S++L   A   DL+ G++IH   +    
Sbjct: 237 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGM 296

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +  + V ++LV +YAKC    EA+ +F  + H   V W  +++AY +    E+  +LF++
Sbjct: 297 VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLK 356

Query: 367 MCRANISADQATF-----------------------------------ASILRASAELAS 391
           M R  + AD+AT+                                   +SIL A +   +
Sbjct: 357 MSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSEN 416

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L +GK++H +V R   + ++ S +ALL MYAK G L  +   F  M  +++V+WN +I A
Sbjct: 417 LRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIA 476

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            A +G+ +  L  F+ M+ S  QP+SV+   VLS CSH  L+EEG+Q FNSM + + + P
Sbjct: 477 NAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEP 536

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
              HY+ +VDI  R+G  +EA K +  MP EP    W +++ +CR++KN+E AK +A +L
Sbjct: 537 DANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKL 596

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           F++E   +   YV++ NI   A  W   SQV+  M+ERG+ K    SW+++ +KVH F  
Sbjct: 597 FEIEP-NNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVV 655

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D+ + ++++I   ++ L+++MK  GYKPDT   L D D+E K ESL  HSE+LA+AF +
Sbjct: 656 GDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGI 715

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +N    S I V KNLR C DCH AIK +SK+ G  I VRDS RFHHFK+G CSC+D W
Sbjct: 716 LNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 235/478 (49%), Gaps = 38/478 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI   +  G+   AR+LF+++      + + LI   +      EA K++  ++ + G  P
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQ-ERGIKP 162

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   F      C+    A  + +VH D  + G  S + + N+L+ +Y K +C++ ARRVF
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++  +D VS+ +L + + K G   + + +F EM   G KP+  T ++ L A   L D+ 
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H F V+   V N+FV +AL+ LY+K   V EAR +F  MP  D VS+N ++T Y 
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342

Query: 252 WNEQY-----------------------------------KESLKLFRELQFTRFDRSQF 276
            N++Y                                   +E++++FR++Q   F  ++ 
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             S++L   +   +L++G++IH        + ++    +L+ MYAKCG    ++ +F  +
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                V W  MI A    GN +EAL LF +M  + +  +  TF  +L   +    +  G 
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 522

Query: 397 QLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           Q+ + + R   +  +    S ++D+Y+++G L +A +  + MP E    +W AL++AC
Sbjct: 523 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC 580



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 182/388 (46%), Gaps = 38/388 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K   +  AR +F+ +V R  VSWT L   Y +    R+   +F +M   G  
Sbjct: 203 NALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSG-V 261

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ +T +++L  C+E        ++H   ++ G    L +C++LV  Y K   +  AR 
Sbjct: 262 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 321

Query: 130 VFKEMPQKDSVSFNALITGFAK-----------------------------------EGL 154
           VF  MP +D VS+N ++T + K                                    G 
Sbjct: 322 VFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 381

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           +EEA+++F +MQ +GFKP++ T ++ L A     ++ +G+++H +V +   V ++    A
Sbjct: 382 SEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTA 441

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           LL +Y+K   +  +R +F  M   D V++N MI   A +   KE+L LF ++  +R   +
Sbjct: 442 LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 501

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF 333
              F+ +LS  ++   ++ G QI         +  +    + +VD+Y++ GR  EA +  
Sbjct: 502 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 561

Query: 334 ANLSHISTV-PWTAMISAYVQKGNLEEA 360
             +    T   W A+++A     N+E A
Sbjct: 562 QGMPMEPTASAWGALLAACRVYKNVELA 589



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 4/250 (1%)

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ +    G F  A+++F N+        + +ISA    G   EA+ ++  +    I  D
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
              F +  +A A        K++H    R G MS+VF G+AL+  Y K   ++ A + F 
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           ++  R++VSW +L S   + G  +  +  F +M  SG +P+ +++ S+L AC+    ++ 
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G +  +    ++ +       +++V +  +     EA  +   MP   D + W+ V+ + 
Sbjct: 284 G-KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA- 340

Query: 556 RIHKNLEFAK 565
              KN E+ K
Sbjct: 341 -YFKNKEYEK 349



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 6/241 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP+++ VS N +++ Y K+        LF  M    V     +W  +IGG  +  +  EA
Sbjct: 326 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 385

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            ++F  M+   G  P+ +T +++L  CS  +      ++H  + +      L    +L+ 
Sbjct: 386 VEMFRKMQ-KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLY 444

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L+L+R VF  M +KD V++N +I   A  G  +EA+ LF +M     +P+  T
Sbjct: 445 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 504

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
           F   LS       +  G Q+   + + + VE +    + ++D+YS+   + EA K    M
Sbjct: 505 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 564

Query: 236 P 236
           P
Sbjct: 565 P 565


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/578 (39%), Positives = 340/578 (58%), Gaps = 7/578 (1%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKL 231
           FT    L        + +G+  H   +    V +    N L++LY+K   +DC   AR++
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDC---ARRV 113

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  M     +S+N MI  Y  N +  E+LKLF  +       ++F  S+ L   A K  +
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAI 173

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
              +Q+HT  I     S   V  + +D+YAKC   ++A  +F N+   ++V W+++ + +
Sbjct: 174 IECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGF 233

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           VQ G  EE L LF    R  +   + T +SIL   A LA +  G Q+H+ +++ GF  N+
Sbjct: 234 VQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNL 293

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F  ++L+D+YAK G ++ + + F +M E+N+V WNA+I++ +++  +   +  FE M Q 
Sbjct: 294 FVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQV 353

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G  P+ V+ LS+LSACSH GL+EEG  YFN +       P   HY+ MVD+L RSG  DE
Sbjct: 354 GIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDE 413

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A KL+ +MPFEP   MW S++ S RIHKN+  A+ AA+QLF++E   +   +V +SN+YA
Sbjct: 414 AWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEP-ENGGNHVLLSNVYA 472

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            +G WE+V   +K +R+ G +K    SW+E K K+HVF A +  HP   ++  K+E +  
Sbjct: 473 ASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYH 532

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           EM+K  ++ +T C LHD   + K E LK+HSE+LA AF LI+ P   PI + KNLR C D
Sbjct: 533 EMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGD 592

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+ +K++S IT R++ VRD +RFHHFKDG CSC DFW
Sbjct: 593 CHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 192/382 (50%), Gaps = 2/382 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   LL  C++  +       H   I FG  +  + CN L++ Y K    D ARRVF
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  +  +S+N +I G+     + EA+KLF  M   G + ++FT ++ L A      I 
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             +Q+H   +K     + FV  A LD+Y+K + + +A  +F  MPE   V+++ +   + 
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N  ++E L LF+  Q      ++F  S++LS  A+   +  G Q+H   +       + 
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VA SLVD+YAKCG+ E++ E+FA++   + V W AMI+++ +  +  EA+ LF +M +  
Sbjct: 295 VATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDA 430
           I  ++ T+ SIL A +    +  G+   + ++       NV   S ++D+  +SG   +A
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 431 IQTFKEMP-ERNIVSWNALISA 451
            +   +MP E     W +L+ +
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGS 436



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 196/373 (52%), Gaps = 11/373 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV+ N+LI+ Y K G    AR +F++M  R+ +SW  +I GY+   +  EA KLF  M 
Sbjct: 90  DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G    ++ T ++ L  C+      E  Q+H   IK   +S   +  + +D Y K   +
Sbjct: 150 REGTQMTEF-TLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMI 208

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF+ MP+K SV++++L  GF + GL+EE + LF   Q  G + ++FT ++ LS  
Sbjct: 209 KDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTC 268

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA I  G QVHA +VK  F  N+FVA +L+D+Y+K   + ++ ++F +M E + V +N
Sbjct: 269 ASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWN 328

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV- 303
            MI  ++ +    E++ LF ++Q      ++  + ++LS  ++   ++ GR      +  
Sbjct: 329 AMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSD 388

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            TA   V   + +VD+  + G+ +EA ++   L  +   P  +M  + +    + + + L
Sbjct: 389 RTAEPNVLHYSCMVDVLGRSGKTDEAWKL---LDKMPFEPTASMWGSLLGSSRIHKNIRL 445

Query: 364 FIEMCRANISADQ 376
                 A I+A+Q
Sbjct: 446 ------ARIAAEQ 452



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 2/177 (1%)

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T   +L+  A+  SL +GK  H   I  G +++  + + L+++Y K G    A + F
Sbjct: 55  DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M  R+I+SWN +I+    N +    LK F  M + G Q    +L S L AC+    I 
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           E  Q  +++  K  L        + +D+  +     +A  +   MP E   + WSS+
Sbjct: 175 ECKQ-LHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSSL 229



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N      L+  Y K G +  + E+F  M ++  V W  +I  +S+     EA  LF  
Sbjct: 290 HRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEK 349

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M+   G  P+ VT+ ++LS CS      E
Sbjct: 350 MQ-QVGIFPNEVTYLSILSACSHTGLVEE 377


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/815 (32%), Positives = 423/815 (51%), Gaps = 68/815 (8%)

Query: 1   MPNQNTVSTNMLISG----YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA 56
           +P+ + VS   L +G    Y+  G    A  +   +    AV W +L+  + ++     A
Sbjct: 74  LPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +   M    G+ PD+ T    L  C E  +      +H  I   G+ S + +CN+LV 
Sbjct: 134 IGVSCRM-LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVA 192

Query: 117 SYCKIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
            Y +   L+ A  VF E+ +K   D +S+N+++    K      A++LF EM  +  + +
Sbjct: 193 MYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKA 252

Query: 174 D------FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
                   +    L A   L  +   +++H++ ++     + FV NAL+D Y+K   + +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMND 312

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQY------------------------------- 256
           A K+F  M   D VS+N M+T Y  +  +                               
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372

Query: 257 ----KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS---- 308
               +E+L  F+++     + +     +LLS  A+   L  G +IH  ++    +S    
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432

Query: 309 --------EVKVANSLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQKGNLE 358
                   ++ V N+L+DMY+KC  F+ A+ IF ++     + V WT MI  Y Q G+  
Sbjct: 433 FGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSN 492

Query: 359 EALNLFIEMCRAN--ISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSG 414
           +AL +F EM      ++ +  T + IL A A LA+L +GKQ+H++V R      S  F  
Sbjct: 493 DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVA 552

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           + L+DMY+K G +  A   F  MP+RN VSW +++S    +G  +  L  F+ M ++G+ 
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV 612

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD +S L +L ACSH G++++GL YF+ M + Y +    EHYA ++D+L R G  D+A K
Sbjct: 613 PDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWK 672

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +MP EP  ++W +++++CR+H N+E A+ A ++L  M+   D + Y  +SNIYA A 
Sbjct: 673 TIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGS-YTLISNIYANAR 731

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W+ V+++++ M++ G++K    SWV+ K     F   D  HP + EI   +E L+  +K
Sbjct: 732 RWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
             GY P+T+ ALHD D+E K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+
Sbjct: 792 VMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHS 851

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A   ISKI   EI VRDSSRFHHFK+G CSC  +W
Sbjct: 852 AFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 260/590 (44%), Gaps = 88/590 (14%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG--------------------YNSI 107
           G D     FA+LL  C    + N + Q+H  II  G                    Y S 
Sbjct: 26  GRDVSPTHFASLLKECR---SVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
             +   +V SY        A  V + +    +V +N L+    KEG  + AI +   M  
Sbjct: 83  KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G KP  FT   AL A   L     GR +H  +    F  NVFV NAL+ +YS+   + +
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202

Query: 228 ARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           A  +F E+      D +S+N ++  +      + +L+LF E+     +++    S ++S+
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262

Query: 285 V------ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           V      A+   L   ++IH+  I     ++  V N+L+D YAKCG   +A ++F  +  
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA------------------ 380
              V W AM++ Y Q GN   A  LF  M + NI  D  T++                  
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382

Query: 381 -----------------SILRASAELASLSLGKQLHSFVIRSGFMS------------NV 411
                            S+L A A L +LS G ++H++ ++   +S            ++
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
              +AL+DMY+K  S K A   F  +P  ERN+V+W  +I   AQ GD+   LK F +M+
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 470 QSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCRS 526
              Y   P++ ++  +L AC+H   +  G Q    +T+ ++  P     A+ ++D+  + 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           G  D A  +   MP + +E+ W+S+++   +H      K+A D   KM+K
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGR---GKEALDIFDKMQK 608


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/813 (32%), Positives = 426/813 (52%), Gaps = 66/813 (8%)

Query: 1   MPNQNTVSTNMLISG----YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA 56
           +P++  +S   L +G    Y+  G    A  +   +    AV W +LI  + ++ +   A
Sbjct: 42  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +   M    G+  D+ T   +L  C E  +       H  I   G+ S + ICN+LV 
Sbjct: 102 INVSCRM-LRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVA 160

Query: 117 SYCKIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF-KP 172
            Y +   L+ A  +F E+ Q+   D +S+N++++   K      A+ LF +M  +   KP
Sbjct: 161 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 220

Query: 173 SD-----FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           ++      +    L A   L  +   ++VH   ++     +VFV NAL+D Y+K   +  
Sbjct: 221 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 280

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYK------------------------------ 257
           A K+F  M   D VS+N M+  Y+ +  +K                              
Sbjct: 281 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 340

Query: 258 -----ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS---- 308
                E+L +FR++ F+    +     ++LS  A+      G +IH  ++    ++    
Sbjct: 341 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 400

Query: 309 ------EVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEA 360
                 ++ V N+L+DMY+KC  F+ A+ IF +  L   + V WT MI  + Q G+  +A
Sbjct: 401 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 460

Query: 361 LNLFIEMCRA--NISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
           L LF+EM      ++ +  T + IL A A LA++ +GKQ+H++V+R      S  F  + 
Sbjct: 461 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 520

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L++MY+K G +  A   F  M +++ +SW ++++    +G     L  F+ M ++G+ PD
Sbjct: 521 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 580

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ L VL ACSHCG++++GL YF+SM+  Y L P+ EHYA  +D+L R G  D+A K +
Sbjct: 581 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTV 640

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP EP  ++W +++++CR+H N+E A+ A ++L +M    D + Y  +SNIYA AG+W
Sbjct: 641 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGS-YTLISNIYATAGRW 699

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V++++  M++ G++K    SWV+ +     F   D  HP + +I   +E+L+  +K  
Sbjct: 700 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 759

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY P+T+ ALHD DEE K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+A 
Sbjct: 760 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAF 819

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             ISKI   EI VRD SRFHHFK+G CSC  +W
Sbjct: 820 TYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/678 (36%), Positives = 365/678 (53%), Gaps = 79/678 (11%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +Y+ +  LLS C      N L+Q+HA II  G+     I + L++ Y      DLAR VF
Sbjct: 51  NYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 106

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
              P    + +N++I  + +     EA++++  M                          
Sbjct: 107 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM-------------------------- 140

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                   V K     +VF+   L+D+YSK   +  AR++F +MP+ D V++N MI   +
Sbjct: 141 --------VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 192

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +E                                   D  + R++  Q +    +S   
Sbjct: 193 QSE-----------------------------------DPYVARRVFDQMVDQDDVS--- 214

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
              +++  YA  G F E  E+F  +  +  V W  +I+AY+Q G+ +EA++ F +M   N
Sbjct: 215 -WGTMMAGYAHNGCFVEVLELFDKMK-LGNVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 272

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              +  TF S+L A+A LA+   G   H+ +I+ GF+SN   G++L+DMYAK G L  + 
Sbjct: 273 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSE 332

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F EM  ++ VSWNA++S  A +G     +  F  M +S  Q DSVS +SVLSAC H G
Sbjct: 333 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAG 392

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG + F+SM+ KY ++P  EHYA MVD+L R+G FDE    +  MP EPD  +W ++
Sbjct: 393 LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGAL 452

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + SCR+H N++  + A D L K+E  R+ A +V +S+IYA +G+W    + +  M + G+
Sbjct: 453 LGSCRMHSNVKLGEVALDHLVKLEP-RNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL 511

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    SWVELK+KVH F   D+ HPQ   +      L+++M+K GY PD SC L + +E
Sbjct: 512 KKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEE 571

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K   L  HSERLAI FAL+NTP GS I ++KNLR C DCH   K ISKIT R I VRD
Sbjct: 572 EDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRD 631

Query: 732 SSRFHHFKDGFCSCRDFW 749
           ++RFHHF+DG CSC D+W
Sbjct: 632 ATRFHHFEDGICSCNDYW 649



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 209/490 (42%), Gaps = 99/490 (20%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G+L  ARE+F+ M  R  V+W  +I G SQ      A ++F  M      D 
Sbjct: 156 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQM-----VDQ 210

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V++ T+++G                   + +N             C +  L+L    F
Sbjct: 211 DDVSWGTMMAG-------------------YAHNG------------CFVEVLEL----F 235

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +M +  +V++N +I  + + G  +EAI  F +M+   F P+  TF + L A   LA   
Sbjct: 236 DKM-KLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 294

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G   HA +++  F+ N  V N+L+D+Y+K   +  + KLF EM   D VS+N M++ YA
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYA 354

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HTQTIVTTAISEV 310
            +     ++ LF  +Q ++       F ++LS   +   ++ GR+I H+ +       ++
Sbjct: 355 VHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDL 414

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMISAYVQKGNL---EEA 360
           +    +VD+  + G F+E       L  I  +P       W A++ +     N+   E A
Sbjct: 415 EHYACMVDLLGRAGLFDE------TLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVA 468

Query: 361 LNLFIEMCRAN---------ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           L+  +++   N         I A    +A   +A +++  L L K               
Sbjct: 469 LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKT-------------- 514

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             G + +++  K  + +   ++  ++   +++ WN L+                E M + 
Sbjct: 515 -PGCSWVELKNKVHAFRVGDKSHPQLESMHLL-WNTLL----------------EKMEKI 556

Query: 472 GYQPDSVSLL 481
           GY PD   +L
Sbjct: 557 GYVPDRSCVL 566



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 30/266 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ V+ N +I+G  +S +   AR +F+ MVD+  VSW  ++ GY+    F E  +LF
Sbjct: 176 MPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELF 235

Query: 61  VDMRTDGGS-----------------------------DPDYVTFATLLSGCSEPDTANE 91
             M+    +                              P+ VTF ++L   +      E
Sbjct: 236 DKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 295

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
            +  HA II+ G+ S  ++ NSL+D Y K   LD + ++F EM  KD+VS+NA+++G+A 
Sbjct: 296 GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAV 355

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV-HAFVVKTNFVENVF 210
            G  + AI LF  MQ    +    +F + LSA      +  GR++ H+   K +   ++ 
Sbjct: 356 HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLE 415

Query: 211 VANALLDLYSKHDCVVEARKLFGEMP 236
               ++DL  +     E       MP
Sbjct: 416 HYACMVDLLGRAGLFDETLGFIKVMP 441


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/658 (36%), Positives = 369/658 (56%), Gaps = 36/658 (5%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++F  +PQ D  + + LI+     GL+ EAIK++  +Q  G KP    F AA  A   
Sbjct: 31  ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAV 90

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             D    ++VH    +   + +VFV NAL+  Y K  CV  AR++F ++   D VS+  +
Sbjct: 91  SGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSL 150

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +CY      ++ + +FRE+ ++    +    S++L   A   DL+ G++IH   +    
Sbjct: 151 SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGM 210

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +  + V ++LV +YAKC    EA+ +F  + H   V W  +++AY +    E+  +LF++
Sbjct: 211 VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLK 270

Query: 367 MCRANISADQATF-----------------------------------ASILRASAELAS 391
           M R  + AD+AT+                                   +SIL A +   +
Sbjct: 271 MSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSEN 330

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L +GK++H +V R   + ++ S +ALL MYAK G L  +   F  M  +++V+WN +I A
Sbjct: 331 LRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIA 390

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            A +G+ +  L  F+ M+ S  QP+SV+   VLS CSH  L+EEG+Q FNSM + + + P
Sbjct: 391 NAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEP 450

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
              HY+ +VDI  R+G  +EA K +  MP EP    W +++ +CR++KN+E AK +A +L
Sbjct: 451 DANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKL 510

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           F++E   +   YV++ NI   A  W   SQV+  M+ERG+ K    SW+++ +KVH F  
Sbjct: 511 FEIEP-NNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVV 569

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D+ + ++++I   ++ L+++MK  GYKPDT   L D D+E K ESL  HSE+LA+AF +
Sbjct: 570 GDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGI 629

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +N    S I V KNLR C DCH AIK +SK+ G  I VRDS RFHHFK+G CSC+D W
Sbjct: 630 LNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 235/478 (49%), Gaps = 38/478 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI   +  G+   AR+LF+++      + + LI   +      EA K++  ++ + G  P
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQ-ERGIKP 76

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   F      C+    A  + +VH D  + G  S + + N+L+ +Y K +C++ ARRVF
Sbjct: 77  DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++  +D VS+ +L + + K G   + + +F EM   G KP+  T ++ L A   L D+ 
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H F V+   V N+FV +AL+ LY+K   V EAR +F  MP  D VS+N ++T Y 
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256

Query: 252 WNEQY-----------------------------------KESLKLFRELQFTRFDRSQF 276
            N++Y                                   +E++++FR++Q   F  ++ 
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             S++L   +   +L++G++IH        + ++    +L+ MYAKCG    ++ +F  +
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                V W  MI A    GN +EAL LF +M  + +  +  TF  +L   +    +  G 
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 436

Query: 397 QLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           Q+ + + R   +  +    S ++D+Y+++G L +A +  + MP E    +W AL++AC
Sbjct: 437 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC 494



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 182/388 (46%), Gaps = 38/388 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K   +  AR +F+ +V R  VSWT L   Y +    R+   +F +M   G  
Sbjct: 117 NALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSG-V 175

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ +T +++L  C+E        ++H   ++ G    L +C++LV  Y K   +  AR 
Sbjct: 176 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 235

Query: 130 VFKEMPQKDSVSFNALITGFAK-----------------------------------EGL 154
           VF  MP +D VS+N ++T + K                                    G 
Sbjct: 236 VFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 295

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           +EEA+++F +MQ +GFKP++ T ++ L A     ++ +G+++H +V +   V ++    A
Sbjct: 296 SEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTA 355

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           LL +Y+K   +  +R +F  M   D V++N MI   A +   KE+L LF ++  +R   +
Sbjct: 356 LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPN 415

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF 333
              F+ +LS  ++   ++ G QI         +  +    + +VD+Y++ GR  EA +  
Sbjct: 416 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 475

Query: 334 ANLSHISTV-PWTAMISAYVQKGNLEEA 360
             +    T   W A+++A     N+E A
Sbjct: 476 QGMPMEPTASAWGALLAACRVYKNVELA 503



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 4/250 (1%)

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ +    G F  A+++F N+        + +ISA    G   EA+ ++  +    I  D
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
              F +  +A A        K++H    R G MS+VF G+AL+  Y K   ++ A + F 
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           ++  R++VSW +L S   + G  +  +  F +M  SG +P+ +++ S+L AC+    ++ 
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G +  +    ++ +       +++V +  +     EA  +   MP   D + W+ V+ + 
Sbjct: 198 G-KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA- 254

Query: 556 RIHKNLEFAK 565
              KN E+ K
Sbjct: 255 -YFKNKEYEK 263



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 6/241 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP+++ VS N +++ Y K+        LF  M    V     +W  +IGG  +  +  EA
Sbjct: 240 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 299

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            ++F  M+   G  P+ +T +++L  CS  +      ++H  + +      L    +L+ 
Sbjct: 300 VEMFRKMQK-MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLY 358

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L+L+R VF  M +KD V++N +I   A  G  +EA+ LF +M     +P+  T
Sbjct: 359 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
           F   LS       +  G Q+   + + + VE +    + ++D+YS+   + EA K    M
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478

Query: 236 P 236
           P
Sbjct: 479 P 479


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/738 (34%), Positives = 397/738 (53%), Gaps = 5/738 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S  V+ G    A  +F  M +R   SW +++GGY +     EA  L+  M    G 
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW-AGV 191

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          +VHA +++FG+   + + N+L+  Y K   +  AR+
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARK 251

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M   D +S+NA+I G  + G     ++LF+ M     +P+  T  +   A   L+D
Sbjct: 252 VFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSD 311

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I   +++H   VK  F  +V   N+L+ +Y+    + +AR +F  M   D +S+  MI+ 
Sbjct: 312 ITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISG 371

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    ++L+++  ++           ++ L+  A    L +G ++H        +S 
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSY 431

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N+L++MYAK  R ++A E+F  +     V W++MI+ +       EAL  F  M  
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML- 490

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A++  +  TF + L A A   +L  GK++H+ V+R G     +  +AL+D+Y K G    
Sbjct: 491 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F     +++VSWN +I+    +G+ +  L  F  MV+ G  PD V+ +++L ACS 
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ EG + F+SMT KY + P  +HYA MVD+L R G   EA   + +MP  PD  +W 
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWG 670

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N CRIH+++E  + AA  + ++E   DA  +V + ++YA AG W+ +++V+K MRE+
Sbjct: 671 ALLNGCRIHRHVELGELAAKYVLELEP-NDAGYHVLLCDLYADAGIWDKLARVRKTMREK 729

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+   +  SWVE+K  VH F  +DE HPQ  EI   +E + + MK  G  P  S +   E
Sbjct: 730 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESHS--PE 787

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           D+ +K +    HSERLA+AF LINT  G+ I V KN   C  CH  +K+IS I  R+I V
Sbjct: 788 DKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIV 847

Query: 730 RDSSRFHHFKDGFCSCRD 747
           RDS + HHFKDG CSC D
Sbjct: 848 RDSKQVHHFKDGSCSCGD 865



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 216/454 (47%), Gaps = 35/454 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M   + +S N +I+G+ ++G      ELF +M+                +++ +      
Sbjct: 256 MAVMDCISWNAMIAGHFENGECNAGLELFLTML----------------QDEVQPNLMTI 299

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +    G   D +TFA                ++H   +K G+ + +  CNSL+  Y  
Sbjct: 300 TSVTVASGLLSD-ITFAK---------------EMHGLAVKRGFATDVAFCNSLIQMYAS 343

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  +  AR VF  M  +D++S+ A+I+G+ K G  ++A++++  M+     P D T A+A
Sbjct: 344 LGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASA 403

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   L  + +G ++H       F+  V V NALL++Y+K   + +A ++F  MPE D 
Sbjct: 404 LAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDV 463

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS++ MI  + +N +  E+L  FR +       +   F   L+  A    L+ G++IH  
Sbjct: 464 VSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGKEIHAH 522

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +      E  + N+L+D+Y KCG+   A   F        V W  MI+ +V  GN E A
Sbjct: 523 VLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETA 582

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLD 419
           L+ F +M +     D+ TF ++L A +    +S G +L HS   +   + N+   + ++D
Sbjct: 583 LSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVD 642

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           + ++ G L +A     EMP   +   W AL++ C
Sbjct: 643 LLSRVGQLTEAYNFINEMPITPDAAVWGALLNGC 676



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 179/353 (50%), Gaps = 3/353 (0%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NA+L +  +      A ++F +MPE D  S+NVM+  Y      +E+L L+  + +  
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                + F  +L       D ++GR++H   +      EV V N+L+ MYAKCG    A+
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F +++ +  + W AMI+ + + G     L LF+ M +  +  +  T  S+  AS  L+
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            ++  K++H   ++ GF ++V   ++L+ MYA  G +  A   F  M  R+ +SW A+IS
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
              +NG     L+ +  M  +   PD +++ S L+AC+  G ++ G++  + + +     
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHELAESKGFM 429

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHKNLE 562
                  +++++  +S   D+A ++   MP E D + WSS+I   C  H+N E
Sbjct: 430 SYVVVTNALLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHRNFE 481



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 96/177 (54%)

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+++ M  + G    A  +FA +       W  M+  Y + G LEEAL+L+  M  
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +  D  TF  +LR+   +    +G+++H+ V+R GF   V   +AL+ MYAK G +  
Sbjct: 189 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           A + F  M   + +SWNA+I+   +NG+  A L+ F  M+Q   QP+ +++ SV  A
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA 305


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 422/763 (55%), Gaps = 36/763 (4%)

Query: 21  NLATARELF-NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           +L+ A+E+F NS    T   +  LI GY+      EA  LF+ M   G S PD  TF   
Sbjct: 82  SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFG 140

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           LS C++       IQ+H  I+K GY   L + NSLV  Y +   LD AR+VF EM +++ 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           VS+ ++I G+A+    ++A+ LF  M +     P+  T    +SA   L D+  G +V+A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F+  +    N  + +AL+D+Y K + +  A++LF E    +    N M + Y      +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L +F  +  +     +    + +S  +   ++  G+  H   +     S   + N+L+D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL--------------------- 357
           MY KC R + A  IF  +S+ + V W ++++ YV+ G +                     
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440

Query: 358 ----------EEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
                     EEA+ +F  M  +  ++AD  T  SI  A   L +L L K ++ ++ ++G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              +V  G+ L+DM+++ G  + A+  F  +  R++ +W A I A A  G+A+  ++ F+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           DM++ G +PD V+ +  L+ACSH GL+++G + F SM + + + P+  HY  MVD+L R+
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  +EA +L+  MP EP++++W+S++ +CR+  N+E A  AA+++  +   R  + YV +
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS-YVLL 679

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           SN+YA AG+W  +++V+ +M+E+G+RK    S ++++ K H FT+ DE HP+   I   +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           + + Q     G+ PD S  L D DE+ K+  L  HSE+LA+A+ LI++ +G+ I ++KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C+DCH+  K  SK+  REI +RD++RFH+ + G CSC DFW
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 234/484 (48%), Gaps = 34/484 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y + G L +AR++F+ M +R  VSWT +I GY++++  ++A  LF  M  D   
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT   ++S C++ +      +V+A I   G     ++ ++LVD Y K   +D+A+R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E    +    NA+ + + ++GL  EA+ +F  M   G +P   +  +A+S+   L +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---------------------------- 221
           I  G+  H +V++  F     + NAL+D+Y K                            
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412

Query: 222 ---HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFP 277
              +  V  A + F  MPE + VS+N +I+       ++E++++F  +Q     +     
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
             ++ S   +   L + + I+          +V++  +LVDM+++CG  E A  IF +L+
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           +     WTA I A    GN E A+ LF +M    +  D   F   L A +    +  GK+
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKE 592

Query: 398 L-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQN 455
           + +S +   G          ++D+  ++G L++A+Q  ++MP E N V WN+L++AC   
Sbjct: 593 IFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652

Query: 456 GDAQ 459
           G+ +
Sbjct: 653 GNVE 656



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 4/250 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+  V+ N +++GYV++G +  A E F +M ++  VSW  +I G  Q + F EA ++F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M++  G + D VT  ++ S C      +    ++  I K G    + +  +LVD + +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               + A  +F  +  +D  ++ A I   A  G  E AI+LF +M   G KP    F  A
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFV--ENVFVANALLDLYSKHDCVVEARKLFGEMP-E 237
           L+A      +  G+++   ++K + V  E+V     ++DL  +   + EA +L  +MP E
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPME 636

Query: 238 VDGVSYNVMI 247
            + V +N ++
Sbjct: 637 PNDVIWNSLL 646



 Score = 46.2 bits (108), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL--KDAIQTFKEMPERN-----IVSWNAL 448
           K  H  + + G  ++V   S +  + A+S  L  ++++   KE+ E +        +N+L
Sbjct: 49  KMFHRSLTKQGLDNDV---STITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I   A +G     +  F  M+ SG  PD  +    LSAC+       G+Q    +    K
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV---K 162

Query: 509 LRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           +   K+ +   S+V      G  D A K+  +M  E + + W+S+I     +   +FAK 
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAKD 218

Query: 567 AADQLFKMEKLRDAAP-YVAMSNIYAVAGQWESVSQVKKA---MRERGV 611
           A D  F+M +  +  P  V M  + +   + E +   +K    +R  G+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/694 (35%), Positives = 386/694 (55%), Gaps = 22/694 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C E         +H  ++K G  + + +  SLV+ Y +      ARR+F  MP
Sbjct: 79  YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            K+ V++ ALITG         A+++FVEM  LG  PS +T    LSA      I LG+Q
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH + +K        + N+L  LY K   +    + F   P+ + +++  MI+  A +E 
Sbjct: 199 VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDEN 258

Query: 256 YKE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           Y +  L LF ++       ++F  ++++S+   +LD+ +G+Q+          + + V N
Sbjct: 259 YLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKN 318

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNL 363
           S + +Y + G  +EA  +F  +   S + W AMIS Y Q     K +L       +AL L
Sbjct: 319 STMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F ++ R+ +  D  TF+SIL   + + +L  G+Q+H+  I++G +S+V   SAL++MY K
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            GS++ A + F EMP R  V+W ++IS  +Q+G +Q  ++ FEDMV SG +P+ ++ +S+
Sbjct: 439 CGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSL 498

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACS+ GL+EE  +YF+ M  +Y + P  +HY  MVD+  R G  D+A   + +  FEP
Sbjct: 499 LSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP 558

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E +WSS++  CR H N+E A  AAD+L ++ K +    YV + N+Y   G+W  V++V+
Sbjct: 559 NEAIWSSLVAGCRSHGNMELAFYAADRLLEL-KPKVIETYVLLLNMYISTGRWRDVARVR 617

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP--- 660
           K  +   V  +   SW+ ++ KV+ F A+D  HPQ  E+ + +ENL+++ K  GY+P   
Sbjct: 618 KLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQN 677

Query: 661 ------DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
                 D+     D+        +K+HSERLA+A  L+ TP G+ + V KN+  C DCH+
Sbjct: 678 APELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHS 737

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           +IK  S +  REI VRDS R H FKDG CSC DF
Sbjct: 738 SIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/463 (31%), Positives = 243/463 (52%), Gaps = 17/463 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y++  +   AR LF+ M D+  V+WT LI G++  ++   A ++FV+M  + G  P
Sbjct: 117 LVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEM-LELGRYP 175

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            + T   +LS CS     +   QVH   IK+G ++I  + NSL   YCK   L+   R F
Sbjct: 176 SHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAF 235

Query: 132 KEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           K  P K+ +++  +I+  A+ E   +  + LF++M   G  P++FT  + +S      D+
Sbjct: 236 KGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDM 295

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +LG+QV AF  K     N+ V N+ + LY +     EA +LF EM     +++N MI+ Y
Sbjct: 296 SLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGY 355

Query: 251 AW-----------NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           A              +  ++LKLFR+L  +      F FS++LSV +  + L+ G QIH 
Sbjct: 356 AQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHA 415

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            TI T  +S+V V ++LV+MY KCG  E A + F  +   + V WT+MIS Y Q G  ++
Sbjct: 416 NTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQD 475

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSAL 417
           A+ LF +M  +    ++ TF S+L A +  A L    + +  ++R+ +     V     +
Sbjct: 476 AIQLFEDMVLSGARPNEITFVSLLSACS-YAGLVEEAERYFDMMRNEYHIEPLVDHYGCM 534

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +DM+ + G L DA    K    E N   W++L++ C  +G+ +
Sbjct: 535 VDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 577



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 35/376 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
           N L   Y KSG+L +    F    D+  ++WT +I   ++   + +    LF+DM  +GG
Sbjct: 216 NSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDM-LEGG 274

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T  +++S C      +   QV A   K G  + L + NS +  Y +    D A 
Sbjct: 275 VMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAM 334

Query: 129 RVFKEMPQKDSVSFNALITGF------AKEGLNE-----EAIKLFVEMQHLGFKPSDFTF 177
           R+F+EM     +++NA+I+G+      AK+ L+      +A+KLF ++     KP  FTF
Sbjct: 335 RLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTF 394

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ LS    +  +  G Q+HA  +KT  + +V V +AL+++Y+K   +  A K F EMP 
Sbjct: 395 SSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPT 454

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--------ANKL 289
              V++  MI+ Y+ + + +++++LF ++  +    ++  F +LLS          A + 
Sbjct: 455 RTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERY 514

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WT 345
              +  + H + +V            +VDM+ + GR ++A   F+ +      P    W+
Sbjct: 515 FDMMRNEYHIEPLVDH-------YGCMVDMFVRLGRLDDA---FSFIKRTGFEPNEAIWS 564

Query: 346 AMISAYVQKGNLEEAL 361
           ++++     GN+E A 
Sbjct: 565 SLVAGCRSHGNMELAF 580



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R   +   A +  +L    E   L   + LH  ++++G  +++F  ++L+++Y +  S
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
            +DA + F  MP++N+V+W ALI+    N +    L+ F +M++ G  P   +L  +LSA
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC-FDEAEKLMAQMPFEPDE 545
           CS    I+ G Q        Y ++   +   SM + LCR  C   + E  +      PD+
Sbjct: 187 CSAARRIDLGQQ-----VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDK 241

Query: 546 --IMWSSVINSCRIHKN 560
             I W+++I+SC   +N
Sbjct: 242 NVITWTTMISSCAEDEN 258



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  + L++ Y K G++  A + F  M  RT V+WT +I GYSQ  + ++A +LF DM 
Sbjct: 425 DVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMV 484

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII--CNSLVDSYCKIR 122
              G+ P+ +TF +LLS CS      E  + + D+++  Y+   ++     +VD + ++ 
Sbjct: 485 LS-GARPNEITFVSLLSACSYAGLVEE-AERYFDMMRNEYHIEPLVDHYGCMVDMFVRLG 542

Query: 123 CLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP 172
            LD A    K    + +   +++L+ G    G  E  +  +   + L  KP
Sbjct: 543 RLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADRLLELKP 591


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/683 (36%), Positives = 381/683 (55%), Gaps = 9/683 (1%)

Query: 75  TFATLLSGCSEPDTANELIQV----HADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARR 129
           T A LL+G  E   A    ++    HA  ++    ++   +C  LV+ Y K+     A  
Sbjct: 15  TDAQLLAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAA 74

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
                P    VS+ A I+G A+     +A+  F  M  LG +P+DFTF +A  A      
Sbjct: 75  SLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPP 134

Query: 190 IAL-GRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +  G Q+HA  ++  ++ ++ FV+ A LD+Y K  C+  AR+LF EMP  + V++N ++
Sbjct: 135 RSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVM 194

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T    + +  E+++ +  L+      +        +  A   +L +G Q +         
Sbjct: 195 TNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFG 254

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +V V+NS+VD Y KC    +A+ +F  +   + V W +M+ AY Q G  EEA  +++  
Sbjct: 255 KDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGA 314

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            RA         +S+L   A L  L LG+ LH+  +RS   SN+F  SAL+DMY K G +
Sbjct: 315 RRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGI 374

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSA 486
           +DA Q F EMP+RN+V+WNA+I   A  GDA   L  F+ M+      P+ ++L++VL+A
Sbjct: 375 EDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTA 434

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS  GL +EG + F +M  ++ + P+ EHYA +VD+LCR+G  + A K++  MP  P   
Sbjct: 435 CSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSIS 494

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++  C++H   E  + AA++LF+++  +D+  +V +SN+ A AG+W   + V+K M
Sbjct: 495 VWGALLGGCKMHGKTELGRIAAEKLFELDP-QDSGNHVLLSNMLASAGRWAEATDVRKEM 553

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           +  G++K    SW+  K+ VHVF A D  H    EI+  +  L  +M+  GY PDT  AL
Sbjct: 554 KNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYAL 613

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           +D +EE K   +  HSE+LA+AF LI  P G PI +MKNLR C DCH A K IS I GRE
Sbjct: 614 YDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGRE 673

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD++ FHHFK+  CSC+D+W
Sbjct: 674 IIVRDNNMFHHFKNYECSCKDYW 696



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 220/429 (51%), Gaps = 6/429 (1%)

Query: 36  TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQV 95
           T VS+T  I G +Q  +  +A   F  M   G    D+   +   +  S P  +    Q+
Sbjct: 83  TVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQL 142

Query: 96  HADIIKFGY--NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           HA  ++FGY  +   + C +L D Y K  CL LARR+F EMP ++ V++NA++T    +G
Sbjct: 143 HALALRFGYLPDDAFVSCAAL-DMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDG 201

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              E ++ +  ++  G  P+  +  A  +A  G+ +++LG Q + FV K  F ++V V+N
Sbjct: 202 RPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSN 261

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +++D Y K  CV +AR +F  M   + VS+  M+  YA N   +E+  ++   +    + 
Sbjct: 262 SVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEP 321

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           + F  S++L+  A  L L +GR +H   + +   S + VA++LVDMY KCG  E+A+++F
Sbjct: 322 TDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVF 381

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASL 392
             +   + V W AMI  Y   G+   AL++F +M     +A +  T  ++L A +     
Sbjct: 382 FEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLT 441

Query: 393 SLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALIS 450
             G +L  +   R G    +   + ++D+  ++G  + A +  + MP R  +S W AL+ 
Sbjct: 442 KEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLG 501

Query: 451 ACAQNGDAQ 459
            C  +G  +
Sbjct: 502 GCKMHGKTE 510



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 227/498 (45%), Gaps = 61/498 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+   VS   L   Y K+G LA AR LF+ M +R  V+W  ++       +  E  + +
Sbjct: 152 LPDDAFVSCAAL-DMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAY 210

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +R  GG  P+ V+     + C+     +   Q +  + K G+   + + NS+VD Y K
Sbjct: 211 FGLRGAGGM-PNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGK 269

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            RC+  AR VF  M  +++VS+ +++  +A+ G  EEA  +++  +  G +P+DF  ++ 
Sbjct: 270 CRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSV 329

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+   GL  + LGR +HA  V++    N+FVA+AL+D+Y K   + +A ++F EMP+ + 
Sbjct: 330 LTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNL 389

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT- 299
           V++N MI  YA       +L +F ++   +   +   + TL++V+       + ++ +  
Sbjct: 390 VTWNAMIGGYAHIGDAHNALSVFDKMIMGQ--ETAPNYITLVNVLTACSRGGLTKEGYEL 447

Query: 300 -QTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKG 355
            QT+      E ++ +   +VD+  + G  E A +I   +    ++  W A++      G
Sbjct: 448 FQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHG 507

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             E             I+A++           EL     G  +         +SN     
Sbjct: 508 KTE----------LGRIAAEKLF---------ELDPQDSGNHV--------LLSN----- 535

Query: 416 ALLDMYAKSGSLKDAIQTFKEM--------PERNIVSWNALI-------SACAQNGDAQA 460
               M A +G   +A    KEM        P R+ ++W  ++       +    N + QA
Sbjct: 536 ----MLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQA 591

Query: 461 TLKSFEDMVQ-SGYQPDS 477
            L   +  +Q +GY PD+
Sbjct: 592 LLAKLKGQMQAAGYMPDT 609


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 398/740 (53%), Gaps = 8/740 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S  V+ G +  A  +F  M +R   SW +++GGY +     EA  L+  M    G 
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW-AGM 193

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          +VHA +++FG+   + + N+LV  Y K   +  AR+
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M   D +S+NA+I G  +    E  ++LF+ M     +P+  T  +   A   L++
Sbjct: 254 VFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +++H F VK  F  +V   N+L+ +Y+    + +A K+F  M   D +S+  MI+ 
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    ++L+++  ++           ++ L+  A    L +G ++H        I  
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V VAN+L++MYAK    ++A E+F  ++    V W++MI+ +       EAL  F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML- 492

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            ++  +  TF + L A A   +L  GK++H++V+R G  S  +  +ALLD+Y K G    
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F    E+++VSWN ++S    +G     L  F  MV+ G  PD V+ +++L ACS 
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G++ +G + F+ MT+K+ + P  +HYA MVD+L R G   EA  L+ +MP +PD  +W 
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N CRIH+++E  + AA  + ++E   D A +V + ++Y  AG+W  V++V+K MRE+
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEP-NDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+ +    SWVE+K   H F  +DE HPQ  EI   +  + + MK  G+ P  S     E
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESL----E 787

Query: 670 DEEIKVES-LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           D+E+  +  L  HSERLA+AF LINT  G+ I V KN   C  CH   K IS+I  REIT
Sbjct: 788 DKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREIT 847

Query: 729 VRDSSRFHHFKDGFCSCRDF 748
           VRD+ + H FKDG CSC D 
Sbjct: 848 VRDTKQLHCFKDGDCSCGDI 867



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 11/357 (3%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NA+L +  +   +  A ++F +MPE D  S+NVM+  Y      +E+L L+  + +  
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                + F  +L       D ++GR++H   +      EV V N+LV MYAKCG    A+
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  ++    + W AMI+ + +    E  L LF+ M    +  +  T  S+  AS  L+
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            +   K++H F ++ GF  +V   ++L+ MY   G + DA + F  M  ++ +SW A+IS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
              +NG     L+ +  M      PD V++ S L+AC+  G ++ G++       K  +R
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 511 PKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHKNLE 562
                Y     +++++  +S   D+A ++   M  E D + WSS+I   C  H++ E
Sbjct: 433 -----YVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFE 483



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 137/276 (49%), Gaps = 12/276 (4%)

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+++ M  + G    A  +FA +       W  M+  Y + G LEEAL+L+  M  
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +  D  TF  +LR    +    +G+++H+ V+R GF   V   +AL+ MYAK G +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA--- 486
           A + F  M   + +SWNA+I+   +N + +A L+ F  M+++  QP+ +++ SV  A   
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            S  G  +E     +    K           S++ +    G   +A K+ ++M  + D +
Sbjct: 311 LSEVGFAKE----MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK-DAM 365

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            W+++I+    ++   F  KA  +++ + +L + +P
Sbjct: 366 SWTAMISG---YEKNGFPDKAL-EVYALMELHNVSP 397



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 3/232 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N L+  Y KS ++  A E+F  M ++  VSW+ +I G+   ++  EA   F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML- 492

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G   P+ VTF   LS C+         ++HA +++ G  S   + N+L+D Y K     
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A   F    +KD VS+N +++GF   GL + A+ LF +M  +G  P + TF A L A  
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611

Query: 186 GLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               +  G ++ H    K + V N+     ++DL S+   + EA  L   MP
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMP 663


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/529 (40%), Positives = 335/529 (63%), Gaps = 6/529 (1%)

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL----KLFRELQFTRFDRSQFPFST 280
           +  AR LF  MP  D  S++ +++ +A + Q + +L    ++ RE      D ++F  S+
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVD-NEFTASS 167

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
            L+        + GR++H   +     ++  V ++L DMYAKCGR ++A+ +F  +    
Sbjct: 168 ALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRD 227

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WTAM+  Y       E   LF+ M R+ I  ++ T+A +LRA AE  S  LGKQ+H 
Sbjct: 228 VVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHG 287

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            + +S    + F+ SAL+ MY+K G +  A++ F+ MP+ ++VSW A+IS  AQNG    
Sbjct: 288 RMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDE 347

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L+ F+ +++SG +PD V+ + VLSAC+H GL+++GL  F+S+  +Y +    +HYA ++
Sbjct: 348 ALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVI 407

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG F+ AE+++  M  +P++ +W+S++  CRIHKN+  A+ AA+ LF++E   + 
Sbjct: 408 DLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEP-ENP 466

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           A YV ++NIYA  G ++ V   ++ M  +G+ K+ A SW+E+ +++HVF   D+LHPQ  
Sbjct: 467 ATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAE 526

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           ++   ++ L  +M++EGY  DT   LHD ++E K + + YHSERLA+AF +I TP+G+PI
Sbjct: 527 QVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPI 586

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V KNLR C DCH  IKLISKI  REI VRDS+RFHHFK+G CSCRD+W
Sbjct: 587 KVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 171/342 (50%), Gaps = 6/342 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSG-NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           +P+ +  S N L++   +S   LA+AR LF+ M  R   SW+ ++  +++  Q R A  +
Sbjct: 87  LPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAI 146

Query: 60  FVDMRTDGGS---DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
           +  M  + GS   D ++   + L +  +         ++H  +++ G ++  ++ ++L D
Sbjct: 147 YRRMLREPGSAGVDNEFTASSALAAATAARCARAGR-ELHCHVVRRGIDADAVVWSALAD 205

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   +D AR VF  MP +D VS+ A++  +     + E  +LFV M   G +P++FT
Sbjct: 206 MYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFT 265

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A  L A        LG+QVH  + K+   ++ F  +AL+ +YSK+  +  A ++F  MP
Sbjct: 266 YAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMP 325

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           ++D VS+  MI+ YA N Q  E+L+ F  L  +        F  +LS  A+   +  G  
Sbjct: 326 KLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLS 385

Query: 297 IHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS 337
           I         I       + ++D+ ++ G FE A+E+   +S
Sbjct: 386 IFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMS 427



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 166/347 (47%), Gaps = 6/347 (1%)

Query: 112 NSLVDSYCK-IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLG 169
           N+LV +  +  R L  AR +F  MP++D  S++A+++  A+ G    A+ ++  M +  G
Sbjct: 96  NTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPG 155

Query: 170 FKPSD--FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
               D  FT ++AL+A         GR++H  VV+     +  V +AL D+Y+K   V +
Sbjct: 156 SAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDD 215

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR +F  MP  D VS+  M+  Y    +  E  +LF  +  +    ++F ++ +L   A 
Sbjct: 216 ARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAE 275

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
               ++G+Q+H +   + A       ++LV MY+K G    A  +F  +  +  V WTAM
Sbjct: 276 FTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAM 335

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
           IS Y Q G  +EAL  F  + R+    D  TF  +L A A    +  G  + HS     G
Sbjct: 336 ISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYG 395

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
                   + ++D+ ++SG  + A +    M  + N   W +L+  C
Sbjct: 396 IEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGC 442


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/681 (36%), Positives = 384/681 (56%), Gaps = 6/681 (0%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D D      ++  C+      E  ++H  I + G  S + + N LV  Y K   L+ AR 
Sbjct: 31  DADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARL 90

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLA 188
           VF+  P K+  S+  LIT  A+ G ++EA+ LF EM   G +P   +F AA++A   G  
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +HA + +  F + V    +L+ +YSK   + E+ K F  M E++ VS+N MI 
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIA 210

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A + +  E+L+  +++           + TL+S       L+  R IH   I+ T   
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIH-DCILRTGFD 269

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V N +++MY KCG  ++A+ +F ++S    + W  MI+AY Q G+  EAL  +  M 
Sbjct: 270 Q-DVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQ 328

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T+ S++ A A L  + +GKQ+H  +    F     + S L++MY K G L 
Sbjct: 329 EEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANS-LVNMYGKCGIL- 386

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           D  ++  +   +  V+WNA+I A AQ+   Q   + F  M   G +P  ++ +SVLSAC+
Sbjct: 387 DVARSIFDKTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACA 446

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           + GL EE   YF  M Q + +RP   HY  MV+ L ++G   +AE L+  MPFEPD + W
Sbjct: 447 NAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTW 506

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           +S + +CR H +++  K AA    +++    +  YVA++ I+A AG ++  S+++K M +
Sbjct: 507 TSFLANCRSHGDMKRGKFAAKGAIRIDP-EASTGYVALARIHADAGDFQEASRIRKLMLD 565

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           RG+RK    S ++L + V+ FTA D+ +P++ EI  +++ L +EMK+ GY PD +   HD
Sbjct: 566 RGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHD 625

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +   K   L  HSERLAIAF +I+T +G+P+ +MKNLR C DCHA  KL SKIT REI 
Sbjct: 626 VEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREII 685

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRDS+RFHHFK+G CSC+DFW
Sbjct: 686 VRDSNRFHHFKNGSCSCKDFW 706



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 231/455 (50%), Gaps = 14/455 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K G+L  AR +F +   +   SWTILI   +Q  + +EA  LF +M    G
Sbjct: 72  SNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQ-G 130

Query: 69  SDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             P  V+F   ++ CS  P+       +HA + ++G+   ++   SLV  Y K   L+ +
Sbjct: 131 IQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEES 190

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            + F+ M + ++VS+NA+I  FA+     EA++   +M   G +    T+   +SA    
Sbjct: 191 VKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQP 250

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           + +   R +H  +++T F ++  V N +L++Y K  C+ +A  +F  M + D +++N MI
Sbjct: 251 SQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMI 308

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y+ +    E+L+ +  +Q        + + +++   A   D+++G+Q+H + +   A 
Sbjct: 309 AAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVH-RRLGDRAF 367

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
              ++ANSLV+MY KCG  + A+ IF   +   +V W AMI AY Q  + ++A  LF+ M
Sbjct: 368 QVTELANSLVNMYGKCGILDVARSIFDKTAK-GSVTWNAMIGAYAQHSHEQQAFELFLLM 426

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA----LLDMYAK 423
                     TF S+L A    A+  L ++ HS+ +       V  G      +++   K
Sbjct: 427 RLDGEEPSYITFMSVLSAC---ANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGK 483

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +G L DA    + MP E ++++W + ++ C  +GD
Sbjct: 484 AGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGD 518



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 176/359 (49%), Gaps = 13/359 (3%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V+T  L+S Y K G+L  + + F SM +  AVSW  +I  +++  +  EA +    M  +
Sbjct: 172 VATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLE 231

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G      VT+ TL+S   +P        +H  I++ G++  ++  N +++ Y K  CL  
Sbjct: 232 GIRACS-VTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQD 288

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  +FK M Q D +++N +I  +++ G   EA++ +  MQ  G  P D+T+ + + A   
Sbjct: 289 AEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACAT 348

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+ +G+QVH  +    F +   +AN+L+++Y K   +  AR +F +  +   V++N M
Sbjct: 349 LGDMEVGKQVHRRLGDRAF-QVTELANSLVNMYGKCGILDVARSIFDKTAK-GSVTWNAM 406

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA +   +++ +LF      R D  +  + T +SV++   +  +  + H+  +    
Sbjct: 407 IGAYAQHSHEQQAFELF---LLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQ 463

Query: 307 ISEVKVANS----LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
              V+        +V+   K GR  +A+ +   +      + WT+ ++     G+++  
Sbjct: 464 DHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRG 522



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 133/267 (49%), Gaps = 7/267 (2%)

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           + ++S   Q G +  A    I+  +    AD      ++++ A L +L+ G+++H  + R
Sbjct: 7   STLLSKRQQLGQIAAA----IDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRR 62

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G  S+V+  + L+ MY K GSL++A   F+  P +N+ SW  LI+ CAQ+G +Q  L  
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M++ G QP SVS  + ++ACS         +  +++ ++Y  +       S+V +  
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD-AAPY 583
           + G  +E+ K    M  E + + W+++I +   H+    A +   ++F +E +R  +  Y
Sbjct: 183 KCGSLEESVKTFESMT-ELNAVSWNAMIAAFAEHRRGLEALRTLQKMF-LEGIRACSVTY 240

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERG 610
           + + + Y    Q +S   +   +   G
Sbjct: 241 ITLMSAYDQPSQLKSARYIHDCILRTG 267


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/750 (32%), Positives = 405/750 (54%), Gaps = 13/750 (1%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVD 62
            ++ V  N +IS Y K G  + A  +F  +  +   +SW  ++G    +  F +    F  
Sbjct: 368  RDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKI 121
            M    G DP+ V+F  +L+ CS  +  +   ++H+ I+    + +   +   LV  Y K 
Sbjct: 428  MLL-AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486

Query: 122  RCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
              +  A  VFKEMP   +  V++N ++  +A+   ++EA    +EM   G  P   +F +
Sbjct: 487  GSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             LS+     +     QV    +  +   +  +  AL+ ++ +   + +AR +F EM   D
Sbjct: 547  VLSSCYCSQEA----QVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGD 602

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             VS+  M++  A N  +KE   LFR +Q       +F  +T L    +   L +G+ IH 
Sbjct: 603  VVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHA 662

Query: 300  QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                    +++ V N+L++MY+ CG + EA   F  +     V W  M +AY Q G  +E
Sbjct: 663  CVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKE 722

Query: 360  ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            A+ LF  M    +  D+ TF++ L  S   A +S GK  H     SG  S+V   + L+ 
Sbjct: 723  AVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVK 782

Query: 420  MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            +YAK G L +AI  F+   +  +V  NA+I A AQ+G ++  +K F  M Q G +PD  +
Sbjct: 783  LYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVAT 842

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L+S++SAC H G++EEG   F +M + + + P  EHYA  VD+L R+G  + AE+++ +M
Sbjct: 843  LVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKM 902

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            PFE + ++W+S++ +C++  + E  ++ A ++ +++   ++A +V +SNIY   G+W+  
Sbjct: 903  PFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP-HNSAAHVVLSNIYCATGKWKDA 961

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
               +K + ++ V+     SW+E+  +VH F A D  HPQT+EI   ++ L   M++ GY+
Sbjct: 962  DVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYE 1021

Query: 660  PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
             D      D ++E+K ++L YHSER+AIAF LI TP  + + ++KNLR C DCH A K I
Sbjct: 1022 ADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYI 1078

Query: 720  SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            S I GREI VRDS RFHHF +G CSC+D W
Sbjct: 1079 SMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 182/702 (25%), Positives = 325/702 (46%), Gaps = 65/702 (9%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+    N LI+ YV+ G+L  A  +F+ M +R  VSWT LI   +Q   F  AF LF  M
Sbjct: 58  QHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTM 117

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY----NSILIICNSLVDSYC 119
             +  + P+  T   +L+ C+          +HA I + G      +  ++ N++++ Y 
Sbjct: 118 LLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYA 177

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKE-GLNEEAIKLFVEMQHLGFKPSDFTFA 178
           K    + A  VF  +P+KD VS+ A+   +A+E     +A+++F EM      P+  TF 
Sbjct: 178 KCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFI 237

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-- 236
            AL A   L D   G  +H+ + +     +    NAL+++Y K      A  +F  M   
Sbjct: 238 TALGACTSLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASR 294

Query: 237 -EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL-SVVANKLDLQIG 294
            E+D VS+N MI+      ++ +++ +FR L+      +     T+L ++ A+ +D    
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAA 354

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
           R+ H +   +  + +V V N+++ MYAKCG F  A  +F  +      + W  M+ A   
Sbjct: 355 RKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASED 414

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNV 411
           + +  + +N F  M  A I  ++ +F +IL A +   +L  G+++HS ++  R  ++ + 
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEM--PERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            + + L+ MY K GS+ +A   FKEM  P R++V+WN ++ A AQN  ++    +  +M+
Sbjct: 475 VA-TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 470 QSGYQPDSVSLLSVLSACSHCG---------LIEEGLQ-------------YFNSMTQKY 507
           Q G  PD++S  SVLS+C +C          ++E G +                 + Q  
Sbjct: 534 QGGVLPDALSFTSVLSSC-YCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQAR 592

Query: 508 KLRPKKEH-----YASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHK 559
            +  + +H     + +MV     +  F E   L  +M  E   PD+   ++ +++C    
Sbjct: 593 SVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDST 652

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
            L   K     + ++    D A   A+ N+Y+  G W       + M+ R +      SW
Sbjct: 653 TLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL-----VSW 707

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
                  ++ +A    + Q    +  +  L + M+ EG KPD
Sbjct: 708 -------NIMSAA---YAQAGLAKEAVL-LFRHMQLEGVKPD 738



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 22/300 (7%)

Query: 269 TRFDRSQ--FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCGR 325
            R DR+     ++ LL    +  DL  G++ H + I    + + + + N L++MY +CG 
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGKRAH-ELIANAGLEQHLFLGNCLINMYVRCGS 75

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA-TFASILR 384
            EEA  IF+ +   + V WTA+ISA  Q G    A  LF  M   + +A  + T  ++L 
Sbjct: 76  LEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLN 135

Query: 385 ASAELASLSLGKQLHSFVIRSGF----MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           A A    L++G+ +H+ +   G      +    G+A+++MYAK GS +DAI  F  +PE+
Sbjct: 136 ACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEK 195

Query: 441 NIVSWNALISACAQN----GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           ++VSW A+  A AQ      DA   L+ F +M+     P+ ++ ++ L AC+    + +G
Sbjct: 196 DVVSWTAMAGAYAQERRFYPDA---LRIFREMLLQPLAPNVITFITALGACTS---LRDG 249

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF--EPDEIMWSSVINS 554
             + +S+  +  L        +++++  + G ++ A  +   M    E D + W+++I++
Sbjct: 250 -TWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/579 (40%), Positives = 348/579 (60%), Gaps = 3/579 (0%)

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           + SDF     L A  G   +   +  H   ++     +V ++N L++ YSK   V  AR+
Sbjct: 62  QASDFIEILQLCARNG--AVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQ 119

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F  M E   VS+N MI  Y  N    E+L +F E++   F  S+F  S++LS      D
Sbjct: 120 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCD 179

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
               +++H  ++ T+    + V  +L+D+YAKCG   +A ++F ++   S+V W++M++ 
Sbjct: 180 ALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAG 239

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           YVQ  N EEAL L+    R ++  +Q T +S++ A + LA+L  GKQ+H+ + +SGF SN
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSN 299

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           VF  S+ +DMYAK GSL+++   F E+ E+NI  WN +IS  A++   +  +  FE M Q
Sbjct: 300 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ 359

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G  P+ V+  S+LS C H GL+EEG ++F  M   Y L P   HY+ MVDIL R+G   
Sbjct: 360 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 419

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA +L+  +PFEP   +W S++ SCR+ KNLE A+ AA +LF++E   +A  +V +SNIY
Sbjct: 420 EAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEP-ENAGNHVLLSNIY 478

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           A   QWE +++ +K +R+  V+KV   SW+++K KVH+F   +  HP+  EI   ++NL+
Sbjct: 479 AANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLV 538

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
            E++K GYKP     LHD +   K E L  HSE+LA+ F L+  PEGS + +MKNLR C 
Sbjct: 539 IELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICV 598

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  +K  S  T R I VRD++RFHHF DG CSC +FW
Sbjct: 599 DCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 200/379 (52%), Gaps = 2/379 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  +L  C+      E    H   ++      + + N L+++Y K   ++LAR+VF  M 
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           ++  VS+N +I  + +  +  EA+ +F EM++ GFK S+FT ++ LSA     D    ++
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   +KT+   N++V  ALLDLY+K   + +A ++F  M +   V+++ M+  Y  ++ 
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           Y+E+L L+R  Q    +++QF  S+++   +N   L  G+Q+H     +   S V VA+S
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASS 305

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
            VDMYAKCG   E+  IF+ +   +   W  +IS + +    +E + LF +M +  +  +
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 365

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           + TF+S+L        +  G++    +  + G   NV   S ++D+  ++G L +A +  
Sbjct: 366 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 425

Query: 435 KEMP-ERNIVSWNALISAC 452
           K +P E     W +L+++C
Sbjct: 426 KSIPFEPTASIWGSLLASC 444



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 195/354 (55%), Gaps = 3/354 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N+LI+ Y K G +  AR++F+ M++R+ VSW  +IG Y++     EA  +F +MR +G 
Sbjct: 101 SNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGF 160

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              ++ T +++LS C     A E  ++H   +K   +  L +  +L+D Y K   ++ A 
Sbjct: 161 KFSEF-TISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAV 219

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF+ M  K SV++++++ G+ +    EEA+ L+   Q +  + + FT ++ + A   LA
Sbjct: 220 QVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 279

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+Q+HA + K+ F  NVFVA++ +D+Y+K   + E+  +F E+ E +   +N +I+
Sbjct: 280 ALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIIS 339

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A + + KE + LF ++Q      ++  FS+LLSV  +   ++ GR+       T  +S
Sbjct: 340 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 399

Query: 309 EVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
              V  S +VD+  + G   EA E+  ++    T   W +++++     NLE A
Sbjct: 400 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELA 453



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 69/253 (27%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G+L  +  +F+ + ++    W  +I G+++  + +E   LF  M+ D G  P+ VT
Sbjct: 310 YAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVT 368

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F++LLS C            H  +++ G                  R   L R  +   P
Sbjct: 369 FSSLLSVCG-----------HTGLVEEGR-----------------RFFKLMRTTYGLSP 400

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             + V ++ ++    + GL  EA +L   ++ + F+P+   + + L++     ++ L   
Sbjct: 401 --NVVHYSCMVDILGRAGLLSEAYEL---IKSIPFEPTASIWGSLLASCRVCKNLELAE- 454

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
                                         V A+KLF   PE  G ++ ++   YA N+Q
Sbjct: 455 ------------------------------VAAKKLFELEPENAG-NHVLLSNIYAANKQ 483

Query: 256 YKE---SLKLFRE 265
           ++E   S KL R+
Sbjct: 484 WEEIAKSRKLLRD 496


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/662 (35%), Positives = 369/662 (55%), Gaps = 37/662 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALS 182
           L  AR +F ++PQ D  ++  LI+   K G + EAI+ + + +H    +P      +   
Sbjct: 27  LQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAK 86

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L D+   ++VH   ++  F  +V + NAL+D+Y K  C   AR +F  MP  D +S
Sbjct: 87  ACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVIS 146

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  M +CY      +E+L  FR++       +    S++L    +  DL+ GR++H   +
Sbjct: 147 WTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVV 206

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY----------- 351
                  V V+++LV+MYA C    +A+ +F ++S   TV W  +I+AY           
Sbjct: 207 RNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLS 266

Query: 352 ------------------------VQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
                                   +Q G  E+AL +   M  +    +Q T  S+L A  
Sbjct: 267 VFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACT 326

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            L SL  GKQ+H ++ R  F  ++ + +AL+ MYAK G L+ + + F  M +R+ VSWN 
Sbjct: 327 NLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNT 386

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I A + +G+ +  L  F +MV SG +P+SV+   VLS CSH  L++EGL  F+SM++ +
Sbjct: 387 MIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDH 446

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            + P  +H++ MVD+L R+G  +EA + + +MP EP    W +++  CR++KN+E  + A
Sbjct: 447 SVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIA 506

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
           A++LF++E   +   YV +SNI   A  W   S+ +K MR+RGV K    SW++++++VH
Sbjct: 507 ANRLFEIES-DNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVH 565

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F   D+ + Q++EI R ++ + ++M+  GY P+T   L D D+E K E L  HSE+LA+
Sbjct: 566 TFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAV 625

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           AF ++N    S I V KNLR C DCH AIK ++KI G +I VRDS RFHHF+DG CSC+D
Sbjct: 626 AFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQD 685

Query: 748 FW 749
           FW
Sbjct: 686 FW 687



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 235/478 (49%), Gaps = 37/478 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            I  Y  SG+L  AR LF+ +      +WTILI   ++  +  EA + + D R     +P
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D +   ++   C+         +VH D I+FG+ S +++ N+L+D Y K RC + AR VF
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + MP +D +S+ ++ + +   GL  EA+  F +M   G +P+  T ++ L A   L D+ 
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY- 250
            GR+VH FVV+     NVFV++AL+++Y+    + +A+ +F  M   D VS+NV+IT Y 
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 251 -------------------------AWNE---------QYKESLKLFRELQFTRFDRSQF 276
                                    +WN          + +++L++   +Q + F  +Q 
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             +++L    N   L+ G+QIH          ++    +LV MYAKCG  E ++ +F+ +
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
           +   TV W  MI A    GN EEAL LF EM  + +  +  TF  +L   +    +  G 
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 397 QLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            +   + R      +    S ++D+ +++G L++A +  K+MP E    +W AL+  C
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 172/386 (44%), Gaps = 38/386 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K      AR +F  M  R  +SWT +   Y      REA   F  M  + G 
Sbjct: 117 NALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLN-GE 175

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT +++L  C++        +VH  +++ G    + + ++LV+ Y     +  A+ 
Sbjct: 176 RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQL 235

Query: 130 VFKEMPQKDSVSFNALIT-----------------------------------GFAKEGL 154
           VF  M ++D+VS+N LIT                                   G  + G 
Sbjct: 236 VFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGR 295

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            E+A+++   MQ+ GFKP+  T  + L A   L  +  G+Q+H ++ +  F +++    A
Sbjct: 296 TEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTA 355

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L+ +Y+K   +  +R++F  M + D VS+N MI   + +   +E+L LFRE+  +    +
Sbjct: 356 LVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPN 415

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF 333
              F+ +LS  ++   +  G  I        ++  +    + +VD+ ++ GR EEA E  
Sbjct: 416 SVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFI 475

Query: 334 ANLSHISTV-PWTAMISAYVQKGNLE 358
             +    T   W A++       N+E
Sbjct: 476 KKMPIEPTAGAWGALLGGCRVYKNVE 501



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 158/369 (42%), Gaps = 73/369 (19%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A   + +Y+  G  + A+ +F  +       WT +ISA  + G   EA+  + +    N
Sbjct: 13  LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72

Query: 372 -ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D+    S+ +A A L  +   K++H   IR GF S+V  G+AL+DMY K    + A
Sbjct: 73  CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH- 489
              F+ MP R+++SW ++ S     G  +  L +F  M  +G +P+SV++ S+L AC+  
Sbjct: 133 RLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL 192

Query: 490 ----------------------------------CGLIEEGLQYFNSMTQK--------- 506
                                             C  I +    F+SM+++         
Sbjct: 193 KDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLI 252

Query: 507 --YKLRPKKE----------------HYASMVDILCRSGCF-----DEAEKLMAQMP--- 540
             Y L  + E                +YAS   ++   GC      ++A +++++M    
Sbjct: 253 TAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVI--GGCMQNGRTEKALEVLSRMQNSG 310

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           F+P++I  +SV+ +C   ++L   K+    +F+    +D     A+  +YA  G  E   
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370

Query: 601 QVKKAMRER 609
           +V   M +R
Sbjct: 371 RVFSMMTKR 379



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 5/187 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M  ++TVS N+LI+ Y  +        +F  M    V     SW  +IGG  Q  +  +A
Sbjct: 240 MSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKA 299

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            ++   M+ + G  P+ +T  ++L  C+  ++     Q+H  I +  +   L    +LV 
Sbjct: 300 LEVLSRMQ-NSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVF 358

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L+L+RRVF  M ++D+VS+N +I   +  G  EEA+ LF EM   G +P+  T
Sbjct: 359 MYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVT 418

Query: 177 FAAALSA 183
           F   LS 
Sbjct: 419 FTGVLSG 425



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+  +T  L+  Y K G+L  +R +F+ M  R  VSW  +I   S      EA  LF +M
Sbjct: 348 QDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREM 407

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE 91
             D G  P+ VTF  +LSGCS     +E
Sbjct: 408 -VDSGVRPNSVTFTGVLSGCSHSRLVDE 434


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/558 (41%), Positives = 346/558 (62%), Gaps = 2/558 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR  HA +++     ++  +N L+++YSK   V  ARK F EMP    VS+N +I     
Sbjct: 62  GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N + +E+LKL  ++Q      ++F  S++L   A K  +    Q+H  +I     S   V
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFV 181

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+ +YAKC   ++A ++F ++   + V W++M++ YVQ G  EEAL +F        
Sbjct: 182 GTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGF 241

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D    +S + A A LA+L  GKQ+H+   +SGF SN++  S+L+DMYAK G +++A  
Sbjct: 242 DQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYL 301

Query: 433 TFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
            F+ + E R+IV WNA+IS  A++  A   +  FE M Q G+ PD V+ + VL+ACSH G
Sbjct: 302 VFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMG 361

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L EEG +YF+ M +++ L P   HY+ M+DIL R+G   +A  L+ +MPF     MW S+
Sbjct: 362 LHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSL 421

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + SC+I+ N+EFA+ AA  LF+ME   +A  ++ ++NIYA   +W+ V++ +K +RE  V
Sbjct: 422 LASCKIYGNIEFAEIAAKYLFEMEP-NNAGNHILLANIYAANKKWDEVARARKLLRETDV 480

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK    SW+E+K+K+H FT  +  HPQ ++I  K++NL+ E+KK  YK DTS  LHD +E
Sbjct: 481 RKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEE 540

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
             K   L++HSE+LAI F L+  P   PI ++KNLR C DCH  +KL+SK T REI VRD
Sbjct: 541 NRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRD 600

Query: 732 SSRFHHFKDGFCSCRDFW 749
           ++RFHHFKDGFCSC +FW
Sbjct: 601 TNRFHHFKDGFCSCGEFW 618



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 198/384 (51%), Gaps = 3/384 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL  C++  ++      HA II+ G    ++  N L++ Y K   +D AR+ F EMP K 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N +I    +   + EA+KL ++MQ  G   ++FT ++ L        I    Q+HA
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F +K     N FV  ALL +Y+K   + +A ++F  MPE + V+++ M+  Y  N  ++E
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L +FR  Q   FD+  F  S+ +S  A    L  G+Q+H  +  +   S + V++SL+D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 319 MYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           MYAKCG   EA  +F  +  + S V W AMIS + +     EA+ LF +M +     D  
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKE 436
           T+  +L A + +     G++    ++R   +S +V   S ++D+  ++G +  A    + 
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 437 MPERNIVS-WNALISACAQNGDAQ 459
           MP     S W +L+++C   G+ +
Sbjct: 409 MPFNATSSMWGSLLASCKIYGNIE 432



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 197/364 (54%), Gaps = 14/364 (3%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +++NMLI+ Y K   + +AR+ FN M  ++ VSW  +IG  +Q  + REA KL + M+
Sbjct: 77  DILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQ 136

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G    ++ T +++L  C+      E +Q+HA  IK   +S   +  +L+  Y K   +
Sbjct: 137 REGTPFNEF-TISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSI 195

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A ++F+ MP+K++V++++++ G+ + G +EEA+ +F   Q +GF    F  ++A+SA 
Sbjct: 196 KDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSAC 255

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VSY 243
            GLA +  G+QVHA   K+ F  N++V+++L+D+Y+K  C+ EA  +F  + EV   V +
Sbjct: 256 AGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLW 315

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI+ +A + +  E++ LF ++Q     R  FP       V N     +G     Q   
Sbjct: 316 NAMISGFARHARAPEAMILFEKMQ----QRGFFPDDVTYVCVLNACS-HMGLHEEGQKYF 370

Query: 304 TTAISEVKVANS------LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGN 356
              + +  ++ S      ++D+  + G   +A ++   +   +T   W +++++    GN
Sbjct: 371 DLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGN 430

Query: 357 LEEA 360
           +E A
Sbjct: 431 IEFA 434



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 39/351 (11%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           LL + A       GR  H Q I      ++  +N L++MY+KC   + A++ F  +   S
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W  +I A  Q     EAL L I+M R     ++ T +S+L   A   ++    QLH+
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           F I++   SN F G+ALL +YAK  S+KDA Q F+ MPE+N V+W+++++   QNG  + 
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F +    G+  D   + S +SAC+    + EG Q  ++++ K          +S++
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQ-VHAISHKSGFGSNIYVSSSLI 287

Query: 521 DILCRSGCFDEA------------------------------------EKLMAQMPFEPD 544
           D+  + GC  EA                                    EK M Q  F PD
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEK-MQQRGFFPD 346

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA-PYVAMSNIYAVAG 594
           ++ +  V+N+C      E  +K  D + +   L  +   Y  M +I   AG
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAG 397


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/556 (39%), Positives = 340/556 (61%), Gaps = 2/556 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           RQVHA VV    ++++ +AN LL  Y++H  + +A  LF  +   D  +++VM+  +A  
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             +      FREL         +    ++    ++ DLQIGR IH   +    +S+  V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            SLVDMYAKC   E+A+ +F  +     V WT MI AY    N  E+L LF  M    + 
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYAD-CNAYESLVLFDRMREEGVV 198

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D+    +++ A A+L ++   +  + +++R+GF  +V  G+A++DMYAK GS++ A + 
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M E+N++SW+A+I+A   +G  +  +  F  M+     P+ V+ +S+L ACSH GLI
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           EEGL++FNSM +++ +RP  +HY  MVD+L R+G  DEA +L+  M  E DE +WS+++ 
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CRIH  +E A+KAA+ L +++  ++   YV +SNIYA AG+WE V++ +  M +R ++K
Sbjct: 379 ACRIHSKMELAEKAANSLLELQP-QNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
           +  ++W+E+ +K + F+  D  HPQ+ EI   + +L+++++  GY PDT   L D +EE+
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEV 497

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K E L  HSE+LAIAF LI  PEG PI + KNLR C DCH   K++S I  R I VRD++
Sbjct: 498 KQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDAN 557

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHF DG CSC D+W
Sbjct: 558 RFHHFNDGTCSCGDYW 573



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 210/417 (50%), Gaps = 8/417 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           QVHA ++  G    L+I N L+ +Y + + +D A  +F  +  +DS +++ ++ GFAK G
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
            +      F E+   G  P ++T    +       D+ +GR +H  V+K   + + FV  
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+D+Y+K   V +A++LF  M   D V++ VMI  YA    Y ESL LF  ++      
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVP 199

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEI 332
            +    T+++  A KL      +     IV    S +V +  +++DMYAKCG  E A+E+
Sbjct: 200 DKVAMVTVVNACA-KLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   + + W+AMI+AY   G  ++A++LF  M    I  ++ TF S+L A +    +
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318

Query: 393 SLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
             G +  +S         +V   + ++D+  ++G L +A++  + M  E++   W+AL+ 
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           AC  +   +   K+   +++   Q P    LLS + A    G  E+  ++ + MTQ+
Sbjct: 379 ACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYA--KAGKWEKVAKFRDMMTQR 433



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 165/349 (47%), Gaps = 4/349 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ V  N L+  Y +   +  A  LF+ +  R + +W++++GG+++       +  F ++
Sbjct: 33  QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PD  T   ++  C +         +H  ++K G  S   +C SLVD Y K   
Sbjct: 93  -LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIV 151

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A+R+F+ M  KD V++  +I  +A     E  + LF  M+  G  P        ++A
Sbjct: 152 VEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNA 210

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +   R  + ++V+  F  +V +  A++D+Y+K   V  AR++F  M E + +S+
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI  Y ++ + K+++ LF  +       ++  F +LL   ++   ++ G +       
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330

Query: 304 TTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             A+  +VK    +VD+  + GR +EA  +   ++       W+A++ A
Sbjct: 331 EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/736 (34%), Positives = 404/736 (54%), Gaps = 10/736 (1%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G+L+ AR LF+ +       +  LI  YS +     A +L+  +R      P+  TF  +
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGP-ALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  CS          VH    + G ++ L +  +LVD Y K      A  VF+ MP +D 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           V++NA++ G+A  G   + I   + MQ     P+  T  A L        ++ GR VHA+
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 200 VVKT----NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
            V+     +  + V V  ALLD+Y+K   +V A ++F  M   + V+++ ++  +    +
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314

Query: 256 YKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             E+  LF+++  Q   F  S    ++ L   AN  DL +G+Q+H     +   +++   
Sbjct: 315 MLEAFSLFKDMLAQGLCF-LSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           NSL+ MYAK G  ++A  +F  +    TV ++A++S YVQ G  +EA  +F +M   N+ 
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D AT  S++ A + LA+L  GK  H  VI  G  S     +AL+DMYAK G +  + Q 
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  MP R+IVSWN +I+    +G  +     F DM     +PD V+ + ++SACSH GL+
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
            EG ++F+ M  KY + P+ EHY  MVD+L R G  DEA + +  MP + D  +W +++ 
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CR+HKN++  K+ +  + ++        +V +SNI++ AG+++  ++V+   +E+G +K
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGP-EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKK 672

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
               SW+E+   +H F   D  H Q++EI ++++N++ ++ K GY+ DTS  L D +EE 
Sbjct: 673 SPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEE 732

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K ++L YHSE+LAIAF ++   E   I V KNLR C DCH  IK ++ +  R I VRD++
Sbjct: 733 KEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDAN 792

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK+G CSC DFW
Sbjct: 793 RFHHFKNGQCSCGDFW 808



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 11/452 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  L+  Y K  +   A  +F  M  R  V+W  ++ GY+   ++ +     + M+ D  
Sbjct: 167 STALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHA 226

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIK----FGYNSILIICNSLVDSYCKIRCL 124
             P+  T   LL   ++    ++   VHA  ++      +   +++  +L+D Y K   L
Sbjct: 227 --PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHL 284

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALS 182
             A RVF+ M  ++ V+++AL+ GF   G   EA  LF +M  Q L F  S  + A+AL 
Sbjct: 285 VYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFL-SPTSVASALR 343

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L+D+ LG+Q+HA + K+    ++   N+LL +Y+K   + +A  LF +M   D VS
Sbjct: 344 ACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVS 403

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           Y+ +++ Y  N +  E+ ++FR++Q            +L+   ++   LQ G+  H   I
Sbjct: 404 YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI 463

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
           V    SE  + N+L+DMYAKCGR + +++IF  +     V W  MI+ Y   G  +EA  
Sbjct: 464 VRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATA 523

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF++M       D  TF  ++ A +    ++ GK+  H    + G    +     ++D+ 
Sbjct: 524 LFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLL 583

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           A+ G L +A Q  + MP + ++  W AL+ AC
Sbjct: 584 ARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 199/453 (43%), Gaps = 52/453 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G+L  A  +F +M  R  V+W+ L+GG+    +  EAF LF DM   G    
Sbjct: 274 LLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFL 333

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
              + A+ L  C+         Q+HA + K G ++ L   NSL+  Y K   +D A  +F
Sbjct: 334 SPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLF 393

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +M  KD+VS++AL++G+ + G  +EA ++F +MQ    +P   T  + + A   LA + 
Sbjct: 394 DQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQ 453

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+  H  V+         + NAL+D+Y+K   +  +R++F  MP  D VS+N MI  Y 
Sbjct: 454 HGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYG 513

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +   KE+  LF +++    +     F  L+S  ++                        
Sbjct: 514 IHGLGKEATALFLDMKHQACEPDDVTFICLISACSHS----------------------- 550

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH-ISTVP----WTAMISAYVQKGNLEEALNLFIE 366
                       G   E K  F  ++H     P    +  M+    + G L+EA      
Sbjct: 551 ------------GLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQG 598

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--------FMSNVFSGSALL 418
           M    + AD   + ++L A     ++ LGKQ+ S + + G         +SN+FS +   
Sbjct: 599 M---PLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRF 655

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           D  A+   ++   Q FK+ P  + +  N  + A
Sbjct: 656 DEAAEVRIIQKE-QGFKKSPGCSWIEINGSLHA 687



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G +  +R++F+ M  R  VSW  +I GY      +EA  LF+DM+     
Sbjct: 475 NALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQ-AC 533

Query: 70  DPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           +PD VTF  L+S CS      E  +  H    K+G    +     +VD   +   LD A 
Sbjct: 534 EPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAY 593

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLG 169
           +  + MP K  V     + G  +   N +  K    M Q LG
Sbjct: 594 QFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLG 635


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/681 (35%), Positives = 384/681 (56%), Gaps = 39/681 (5%)

Query: 100 IKFGYNSILIICNSLVDSYCKI----RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           IK G ++     + L+D +C +      L  A  VFK + + + +S+N +I G A     
Sbjct: 1   IKIGLHNTNYALSKLLD-FCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDP 59

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
             A+ L+V M  LG  P+ +TF     +         G+Q+HA ++K     ++ V  +L
Sbjct: 60  ISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119

Query: 216 LDLY---------------SKHDCVV----------------EARKLFGEMPEVDGVSYN 244
           + +Y               S H  VV                +A+K+F E+P  D VS+N
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ YA   +YKE+L+LF E+        +   +T+LS   +  ++++GRQIH+     
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S +K+ N+L+D+Y+KCG  E A  +F  L +   + W  +I  Y    + +EAL +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS--GFMSNVFSGSALLDMYA 422
            EM +   + +  T  SIL A A L ++ +G+ +H ++ +   G ++N    ++L+DMYA
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G+++ A Q F  +  +++ S NA+I   A +G A A       M + G +PD ++ + 
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVG 419

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +LSACSH GL + G + F SMT  Y++ PK EHY  M+D+L RSG F EAE+L+  M  E
Sbjct: 420 LLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTME 479

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W S++ +C+IHKNLE  +  A +L K+E  ++   YV +SNIYA + +W+ V++V
Sbjct: 480 PDGVIWGSLLKACKIHKNLELGELIAQKLMKIEP-KNPGSYVLLSNIYATSARWDDVARV 538

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  + ++G++KV   S +E+ S VH F   D+ HPQ  EI + +E +   + + G+  DT
Sbjct: 539 RTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDT 598

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           S  L + +EE+K  +L YHSE+LAIAF LI+T  G+ + ++KNLR C +CH A KLISKI
Sbjct: 599 SEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKI 658

Query: 723 TGREITVRDSSRFHHFKDGFC 743
             REI  RD SRFHHFKDG C
Sbjct: 659 YKREIIARDRSRFHHFKDGMC 679



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 238/504 (47%), Gaps = 37/504 (7%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F S+ +   +SW  +I G++  +    A  L+V M + G S P+  TF  L 
Sbjct: 27  GLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLS-PNSYTFPFLF 85

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC----------------- 123
             C++   A E  Q+HA I+K+G    L +  SL+  Y +                    
Sbjct: 86  KSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVV 145

Query: 124 --------------LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                         +D A+++F E+P KD VS+NA+I+G+A+ G  +EA++LF EM  + 
Sbjct: 146 SYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD 205

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            KP + T A  LS      ++ LGRQ+H+++    F  N+ + NAL+DLYSK   +  A 
Sbjct: 206 VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAH 265

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  YA+   +KE+L +F+E+       +     ++L   A+  
Sbjct: 266 GLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLG 325

Query: 290 DLQIGRQIHT--QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            + IGR IH      +   I+   +  SL+DMYAKCG  E A ++F  + + S     AM
Sbjct: 326 AIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAM 385

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
           I  +   G  + A +L   M +  I  D  TF  +L A +      LG+++  S  +   
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ-ATLKS 464
               +     ++D+  +SG  K+A +    M  E + V W +L+ AC  + + +   L +
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS 488
            + M      P S  LLS + A S
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATS 529



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 223/469 (47%), Gaps = 34/469 (7%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   +I+GY   GN+  A+++F+ +  +  VSW  +I GY++  +++EA +LF +
Sbjct: 141 HRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200

Query: 63  M-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M + D    PD  T AT+LS C+         Q+H+ I   G+ S L + N+L+D Y K 
Sbjct: 201 MMKMD--VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC 258

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++ A  +F+ +  KD +S+N LI G+A    ++EA+ +F EM  LG  P+D T  + L
Sbjct: 259 GEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSIL 318

Query: 182 SAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            A   L  I +GR +H ++ K     + N  +  +L+D+Y+K   +  A ++F  +    
Sbjct: 319 PACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             S N MI  +A + +   +  L   ++    +     F  LLS  ++     +GR+I  
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK 438

Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
              +   I  +++    ++D+  + G F+EA+E+  +++     V W +++ A     NL
Sbjct: 439 SMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNL 498

Query: 358 E------------EALNLFIEMCRANISADQATFASILRASAEL-----------ASLSL 394
           E            E  N    +  +NI A  A +  + R    L           +S+ +
Sbjct: 499 ELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEI 558

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLD----MYAKSGSLKDAIQTFKEMPE 439
              +H F+I   F         +L+    + A++G + D  +  +EM E
Sbjct: 559 DSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEE 607


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/658 (35%), Positives = 385/658 (58%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y ++G +  AR LF+ M  +  V W +++ GY +   +  A  +F++MR    ++P
Sbjct: 188 LIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE-TNP 246

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA +LS C+     N   Q+H  ++  G      + N+L+  Y K   L  ARR+F
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLF 306

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP+ D V++N +I+G+ + G  +EA  LF EM     KP   TF++ L      A + 
Sbjct: 307 DMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLR 366

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+++H ++++     +VF+ +AL+D+Y K   V  ARK+F +   VD V    MI+ Y 
Sbjct: 367 QGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYV 426

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N     +L++FR L   R   +    +++L   A    L +G+++H   +         
Sbjct: 427 LNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCY 486

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V ++++DMYAKCGR + A + F  +S    V W +MI++  Q G  EEA++LF +M  A 
Sbjct: 487 VGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAG 546

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + ++ L A A L +L  GK++H+F++R  F S++F+ SAL+DMY+K G+L  A 
Sbjct: 547 TKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLAC 606

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M E+N VSWN++I+A   +G  + +L  F  M+  G QPD V+ L+++SAC H G
Sbjct: 607 RVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAG 666

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            ++EG+ YF  MT++  +  + EHYA MVD+  R+G  +EA  ++  MPF PD  +W ++
Sbjct: 667 QVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTL 726

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E A+ A+  LF ++  +++  YV +SN++A AGQWESV +++  M+ERGV
Sbjct: 727 LGACRLHGNVELAEVASRNLFDLDP-QNSGYYVLLSNVHANAGQWESVLKIRSLMKERGV 785

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           +KV   SW+++ +  H+F A D  HPQ+++I   ++NL  E++KEGY P     +H +
Sbjct: 786 QKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQ 843



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 180/604 (29%), Positives = 304/604 (50%), Gaps = 3/604 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +    L+  YV  G    A+ +F  +    +  W  +I G++   QF  A   +  M 
Sbjct: 80  NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM- 138

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G+ PD  TF  ++  C   ++      VH  I   G+   + + +SL+  Y +  C+
Sbjct: 139 LGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCI 198

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR +F  MP KD V +N ++ G+ K G  + A  +F+EM+     P+  TFA  LS  
Sbjct: 199 HDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                I  G Q+H  VV +    +  VAN LL +Y+K   + +AR+LF  MP+ D V++N
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWN 318

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ Y  N    E+  LF E+   R       FS+ L +++    L+ G++IH   I  
Sbjct: 319 GMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN 378

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +V + ++L+D+Y KC   E A++IF   + +  V  TAMIS YV  G    AL +F
Sbjct: 379 GVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF 438

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             + +  + A+  T AS+L A A LA+L+LGK+LH  ++++G   + + GSA++DMYAK 
Sbjct: 439 RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 498

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A QTF  + +++ V WN++I++C+QNG  +  +  F  M  +G + D VS+ + L
Sbjct: 499 GRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL 558

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SAC++   +  G +  ++   +   R      ++++D+  + G  D A ++   M  E +
Sbjct: 559 SACANLPALHYGKE-IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKN 616

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           E+ W+S+I +   H  L+ +      +       D   ++A+ +    AGQ +      +
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFR 676

Query: 605 AMRE 608
            M E
Sbjct: 677 CMTE 680



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 252/496 (50%), Gaps = 34/496 (6%)

Query: 76  FATLLSGCSEPDTANELIQVHADII--KFGYNSIL--------IICNSLVDSYCKIRCLD 125
             ++L  C++P   ++  Q HA ++    GYN IL        ++C + +D         
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD--------- 99

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A+ +F ++    S  +N +I GF   G  + A+  + +M   G  P  +TF   + A  
Sbjct: 100 -AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG 158

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GL  +ALGR VH  +    F  +VFV ++L+  YS++ C+ +AR LF  MP  DGV +NV
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNV 218

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  Y  N  +  +  +F E++ T  + +   F+ +LSV A+++ +  G Q+H   + + 
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +  VAN+L+ MYAKCG   +A+ +F  +     V W  MIS YVQ G ++EA  LF 
Sbjct: 279 LEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFH 338

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM  A +  D  TF+S L   +E A+L  GK++H ++IR+G   +VF  SAL+D+Y K  
Sbjct: 339 EMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR 398

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            ++ A + F +    +IV   A+IS    NG     L+ F  ++Q   + +SV+L SVL 
Sbjct: 399 DVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLP 458

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS------MVDILCRSGCFDEAEKLMAQM 539
           AC+    +  G +    +        K  H  S      ++D+  + G  D A +    +
Sbjct: 459 ACAGLAALTLGKELHGHIL-------KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 511

Query: 540 PFEPDEIMWSSVINSC 555
             + D + W+S+I SC
Sbjct: 512 S-DKDAVCWNSMITSC 526



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 227/463 (49%), Gaps = 38/463 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + V+ N +ISGYV++G +  A  LF+ M+                           
Sbjct: 309 MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM----------------------- 345

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     PD +TF++ L   SE  T  +  ++H  II+ G +  + + ++L+D Y K
Sbjct: 346 ---------KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFK 396

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +++AR++F +    D V   A+I+G+   G+N  A+++F  +     + +  T A+ 
Sbjct: 397 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASV 456

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A  GLA + LG+++H  ++K     + +V +A++D+Y+K   +  A + F  + + D 
Sbjct: 457 LPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDA 516

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +N MIT  + N + +E++ LFR++            S  LS  AN   L  G++IH  
Sbjct: 517 VCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAF 576

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +     S++   ++L+DMY+KCG  + A  +F  +   + V W ++I+AY   G L+++
Sbjct: 577 MMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDS 636

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS---GFMSNVFSGSAL 417
           LNLF  M    I  D  TF +I+ A      +  G  +H F   +   G M+ +   + +
Sbjct: 637 LNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYACM 694

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +D++ ++G L +A      MP   +   W  L+ AC  +G+ +
Sbjct: 695 VDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVE 737


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/697 (35%), Positives = 399/697 (57%), Gaps = 4/697 (0%)

Query: 4    QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            QN VS  N LI+ +   G +  A +LF+ M +   +SW  +I  YS +    + F +F D
Sbjct: 479  QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 538

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR  G   PD  T  +L+S C+  D  +    +H+  ++   +S + + N+LV+ Y    
Sbjct: 539  MRHHG-LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 597

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             L  A  +F  M ++D +S+N +I+ + +   + +A+K   ++ H    P+  TF++AL 
Sbjct: 598  KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 657

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A      +  G+ VHA V++ +   N+ V N+L+ +Y K + + +A K+F  MP  D VS
Sbjct: 658  ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 717

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQT 301
            YNV+I  YA  E   +++++F  ++      +      +    A+  DL   GR +H   
Sbjct: 718  YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYI 777

Query: 302  IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
            I T  +S+  VANSL+ MYAKCG  E +  IF ++++ + V W A+I+A VQ G+ EEAL
Sbjct: 778  IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEAL 837

Query: 362  NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
             LFI+M  A    D+   A  L + A LASL  G QLH   ++SG  S+ +  +A +DMY
Sbjct: 838  KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 897

Query: 422  AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
             K G + + +Q   +   R    WN LIS  A+ G  +   ++F+ MV +G +PD V+ +
Sbjct: 898  GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 957

Query: 482  SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            ++LSACSH GL+++G+ Y+NSM   + + P  +H   +VD+L R G F EAEK + +MP 
Sbjct: 958  ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 1017

Query: 542  EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
             P++++W S+++S R HKNLE  +K A +L +++   D+A YV +SN+YA   +W  V +
Sbjct: 1018 LPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSA-YVLLSNLYATNARWADVDK 1076

Query: 602  VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            ++  M+   + K  A SW++LK++V  F   D  H    +I  K++ ++ ++++ GY  D
Sbjct: 1077 LRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIAD 1136

Query: 662  TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
            TS ALHD DEE K ++L  HSE+LA+A+ LI  PEGS
Sbjct: 1137 TSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 1173



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 163/621 (26%), Positives = 288/621 (46%), Gaps = 54/621 (8%)

Query: 27  ELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEP 86
            LF+ M DRT  +W   + G  +     +AF++   MR  G     +   A+L++ C E 
Sbjct: 298 HLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFA-LASLVTAC-ER 355

Query: 87  DTANELIQ----VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
              +E I     +HA   + G    + I  +L+  Y     +  A+R+F EMP+++ VS+
Sbjct: 356 RGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSW 415

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
            AL+   +  G  EEA++ + +M+  G   +   FA  +S    L +   G QV + V+ 
Sbjct: 416 TALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIV 475

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           +     V VAN+L+ ++     V +A KLF  M E D +S+N MI+ Y+      +   +
Sbjct: 476 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 535

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F +++            +L+SV A+      G  IH+  + ++  S V V N+LV+MY+ 
Sbjct: 536 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 595

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
            G+  +A+ +F N+S    + W  MIS+YVQ  N  +AL    ++   N S +  TF+S 
Sbjct: 596 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 655

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L A +   +L  GK +H+ V++     N+  G++L+ MY K  S++DA + F+ MP  +I
Sbjct: 656 LGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDI 715

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL--------------------- 481
           VS+N LI   A   D    ++ F  M  +G +P+ ++++                     
Sbjct: 716 VSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHA 775

Query: 482 ---------------SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
                          S+++  + CG +E     FNS+T K  +      + +++    + 
Sbjct: 776 YIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS-----WNAIIAANVQL 830

Query: 527 GCFDEAEKLMAQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
           G  +EA KL   M     + D +  +  ++SC    +LE   +       M+   D+  Y
Sbjct: 831 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG--LGMKSGLDSDSY 888

Query: 584 V--AMSNIYAVAGQWESVSQV 602
           V  A  ++Y   G+ + + QV
Sbjct: 889 VVNAAMDMYGKCGKMDEMLQV 909



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 163/361 (45%), Gaps = 35/361 (9%)

Query: 1    MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
            MP  + VS N+L                               IGGY+      +A ++F
Sbjct: 710  MPTHDIVSYNVL-------------------------------IGGYAVLEDGTKAMQVF 738

Query: 61   VDMRTDGGSDPDYVTFATLL-SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
              MR+  G  P+Y+T   +  S  S  D  N    +HA II+ G+ S   + NSL+  Y 
Sbjct: 739  SWMRS-AGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 797

Query: 120  KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            K   L+ +  +F  +  K+ VS+NA+I    + G  EEA+KLF++MQH G K      A 
Sbjct: 798  KCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAE 857

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             LS+   LA +  G Q+H   +K+    + +V NA +D+Y K   + E  ++  +     
Sbjct: 858  CLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 917

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
               +N +I+ YA    +KE+ + F+++  T        F  LLS  ++   +  G   + 
Sbjct: 918  QQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYN 977

Query: 300  QTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQKGNL 357
                +  +S  +K    +VD+  + GRF EA++    +  +   + W +++S+     NL
Sbjct: 978  SMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNL 1037

Query: 358  E 358
            E
Sbjct: 1038 E 1038


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/562 (40%), Positives = 350/562 (62%), Gaps = 6/562 (1%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I  G Q+H ++VK+       VAN L++ YSK     ++R+ F + P+    +++ +I+C
Sbjct: 31  IVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISC 90

Query: 250 YAWNEQYKESLKLFRELQFT--RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +A NE    SL+  R++     R D    P +T    + ++ D  IG+ +H  ++ T   
Sbjct: 91  FAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCD--IGKSVHCLSMKTGYD 148

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           ++V V +SLVDMYAKCG    A+++F  +   + V W+ M+  Y Q G  EEAL LF E 
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEA 208

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
              N++ +  +F++++   A    L LG+Q+    I+S F S+ F GS+L+ +Y+K G L
Sbjct: 209 LFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDL 268

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + A Q F E+P RN+  WNA++ ACAQ+   Q  ++ F+ M  SG +P+ ++ L+VL+AC
Sbjct: 269 EGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG  YF+ M +  ++ P  +HYAS+VD+L R+G  +EA +++  MP +P E +
Sbjct: 329 SHAGLVDEGKYYFDLMKES-RIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESV 387

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ SC IHKN E A  AAD++F++  +  +  ++++SN YA  G++E  ++ +K +R
Sbjct: 388 WGALLTSCTIHKNTELAAFAADKVFELGPV-SSGMHISLSNAYAADGRFEDAAKARKLLR 446

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +RG +K T  SWVE ++KVH F A +  H ++ EI  K+  L +EM+K GY  DTS  L 
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLR 506

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + D + K ++++YHSERLAIAF LI  P   PI VMKNLR C DCH AIK +S  T R I
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVI 566

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD++RFH F+DG CSC D+W
Sbjct: 567 IVRDNNRFHRFEDGKCSCNDYW 588



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 198/361 (54%), Gaps = 1/361 (0%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +Q+H  I+K G + I ++ N+L++ Y K +    +RR F++ PQK + +++++I+ FA+ 
Sbjct: 35  LQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQN 94

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
            L   +++   +M     +P D    +A  +   L+   +G+ VH   +KT +  +VFV 
Sbjct: 95  ELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVG 154

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           ++L+D+Y+K   +V ARK+F EMP  + V+++ M+  YA   + +E+L LF+E  F    
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            + + FST++SV AN   L++GRQI    I ++  S   V +SLV +Y+KCG  E A ++
Sbjct: 215 VNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQV 274

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   +   W AM+ A  Q  + ++ + LF  M  + +  +  TF ++L A +    +
Sbjct: 275 FDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISA 451
             GK     +  S         ++L+DM  ++G L++A++    MP     S W AL+++
Sbjct: 335 DEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTS 394

Query: 452 C 452
           C
Sbjct: 395 C 395



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  AR++F+ M  R  V+W+ ++ GY+Q  +  EA  LF +   +  +  
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           DY +F+T++S C+         Q+    IK  ++S   + +SLV  Y K   L+ A +VF
Sbjct: 217 DY-SFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVF 275

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
            E+P ++   +NA++   A+    ++ I+LF  M+  G KP+  TF   L+A    GL D
Sbjct: 276 DEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 2/171 (1%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L +SA   S+  G QLH ++++SG        + L++ Y+KS    D+ + F++ P+++
Sbjct: 21  LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
             +W+++IS  AQN     +L+    M+    +PD   L S   +C      + G +  +
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIG-KSVH 139

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            ++ K          +S+VD+  + G    A K+  +MP   + + WS ++
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGMM 189



 Score = 43.1 bits (100), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G+L  A ++F+ +  R    W  ++   +Q +  ++  +LF  M+  G   P
Sbjct: 258 LVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSG-MKP 316

Query: 72  DYVTFATLLSGCSEPDTANE 91
           +++TF  +L+ CS     +E
Sbjct: 317 NFITFLNVLNACSHAGLVDE 336


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/566 (40%), Positives = 346/566 (61%), Gaps = 13/566 (2%)

Query: 193 GRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           GRQ+H   +++  F  + F A+ALL +Y+     ++ARK F E+P  + V    M + Y 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 252 WNEQYKESLKLFREL----QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            N     SL LFR+L      T  D +    +   S  A   D  I   +H   + T   
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVA--FSASARIPDCGITSSLHALVVKTGLD 225

Query: 308 SEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            +  V N+++D YAK GR     A+++F  +     V W +MI+ Y Q G   +AL L+ 
Sbjct: 226 GDAGVVNTMLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQNGMSADALGLYR 284

Query: 366 EM--CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           +M     +I  +  T ++IL A A   ++  GK +H+ V+R G   NV+ G++++DMY+K
Sbjct: 285 KMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSK 344

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++ A + F+++ E+NI+SW+A+I+    +G  Q  L  F +M +SG  P+ ++ +SV
Sbjct: 345 CGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV 404

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L+ACSH GL+++G  ++N+M +++ + P  EHY  MVD+L R+GC DEA  L+ +M  +P
Sbjct: 405 LAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W +++++CRIHKN+E A+ +A +LF+++   +   YV +SNIYA AG W+ V +++
Sbjct: 465 DAAIWGALLSACRIHKNVELAEISAKRLFELDA-TNCGYYVLLSNIYAEAGMWKDVERMR 523

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             ++ RG+ K   YS VELK + H+F   D+ HPQ  EI   +  L+++M++ GY P+T 
Sbjct: 524 VLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTG 583

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD DEE K  +L  HSE+LAIAFAL+N+  GS I V+KNLR CTDCH AIKLI+KI 
Sbjct: 584 SVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIA 643

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD  RFHHFKDG CSC D+W
Sbjct: 644 QREIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 169/360 (46%), Gaps = 8/360 (2%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S + L+  Y        AR+ F+ +     V  T +  GY + N    +  LF  +   G
Sbjct: 127 SASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLIASG 186

Query: 68  GSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK--IRCL 124
            +   D        S  +          +HA ++K G +    + N+++D+Y K   R L
Sbjct: 187 SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDL 246

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALS 182
             AR+VF  M +KD VS+N++I  +A+ G++ +A+ L+ +M ++    K +  T +A L 
Sbjct: 247 GAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILL 305

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      I  G+ +H  VV+    ENV+V  +++D+YSK   V  ARK F ++ E + +S
Sbjct: 306 ACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILS 365

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MIT Y  +   +E+L +F E+  +  + +   F ++L+  ++   L  GR  +    
Sbjct: 366 WSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMK 425

Query: 303 VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
               I   V+    +VD+  + G  +EA  +   +        W A++SA     N+E A
Sbjct: 426 KRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELA 485



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 3/146 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      ++  Y K G +  AR+ F  + ++  +SW+ +I GY      +EA  +F +M
Sbjct: 330 ENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEM 389

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
               G +P+Y+TF ++L+ CS     ++     +A   +FG    +     +VD   +  
Sbjct: 390 -CRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAG 448

Query: 123 CLDLARRVFKEMPQK-DSVSFNALIT 147
           CLD A  + KEM  K D+  + AL++
Sbjct: 449 CLDEAYGLIKEMKVKPDAAIWGALLS 474



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 14/217 (6%)

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W+A +   +  G+   AL  F    R N +A +       RA+A   SL+ G+QLH   I
Sbjct: 57  WSAAVGDLLSSGDPVAALAAFAAALRVNPAALRPALPPAFRAAAAATSLAAGRQLHLLAI 116

Query: 404 RSG-FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           RSG F S+ FS SALL MY       DA + F E+P  N V   A+ S   +N     +L
Sbjct: 117 RSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSL 176

Query: 463 KSFEDMVQSGYQP--DSVSLLSVLSACSH---CGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             F  ++ SG     D  + L   SA +    CG+        +++  K  L        
Sbjct: 177 ALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSS----LHALVVKTGLDGDAGVVN 232

Query: 518 SMVDILCRSGCFD--EAEKLMAQMPFEPDEIMWSSVI 552
           +M+D   + G  D   A K+   M  E D + W+S+I
Sbjct: 233 TMLDAYAKGGRRDLGAARKVFDTM--EKDVVSWNSMI 267


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/686 (36%), Positives = 385/686 (56%), Gaps = 21/686 (3%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           +FA  +  C +   +N +  +H  I + G  S   + N LV    K   L  AR +F  +
Sbjct: 46  SFAAAIRSCKD---SNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             K+  S+N +I+ +A  G    A+ LF +M      P+  TFA ALSA   L D+  GR
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKMD---VPPTAMTFATALSACSSLGDLQRGR 159

Query: 195 QVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           ++HA +  +  +  +V +  A+  +Y+K   +  A+ +F  +P  + VS+N +I  YA +
Sbjct: 160 EIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQS 219

Query: 254 -EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA---ISE 309
              + ++L LF ++        +  F  +L    +   L+   +IH + + T     + +
Sbjct: 220 GHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE---KIHARIVETGLQFDVRD 276

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N+L++MYAKCG  E A++IF  +     V    MI+ + Q+G  +E++ +F EM  
Sbjct: 277 VGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDL 336

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVI-----RSGFMSNVFSGSALLDMYAKS 424
             +  D  TFAS++ A +   +L  GK++H  V+     R   + NV   +AL+ MY K 
Sbjct: 337 EGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKC 396

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+L+ A   FK M  +N VSWNA+++ACA  G               G + DS S +SVL
Sbjct: 397 GTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVL 456

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            ACSH G++E    +F  M   + L P  E+Y  MVD+L RSG   +A++LM  MPF PD
Sbjct: 457 IACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPD 516

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            I W +++  CR+  +LE A  AA+Q F +E  ++ APY  +S++Y+  G+ + + +++ 
Sbjct: 517 AIAWRTLLGGCRVQGSLENAASAAEQAFNLEP-QNTAPYTLLSSLYSATGKKDELVELRS 575

Query: 605 AMRERGVRK-VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           +M+ERG+RK V   S +E+  +VH F A D  HPQ ++I R+++ L  E+K+ G+ P T 
Sbjct: 576 SMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTD 635

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             +HD   E K E L  HSE+LA+AF LI+T  G P+LV+KNLR C+DCH AIKLISK+ 
Sbjct: 636 GVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLR 695

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            R ITVRD++RFH F+ G CSC D+W
Sbjct: 696 SRVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 253/520 (48%), Gaps = 26/520 (5%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+L+    K G+L  AR +F+++  +   SW I+I  Y+ +     A  LF  M      
Sbjct: 80  NLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDV---- 135

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            P  +TFAT LS CS         ++HA I    G    +I+  ++   Y K   L  A+
Sbjct: 136 PPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAK 195

Query: 129 RVFKEMPQKDSVSFNALITGFAKEG-LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            VF  +P K+ VS+NALI  +A+ G  + +A+ LF +M   G +P   TF   L A    
Sbjct: 196 SVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGA---C 252

Query: 188 ADIALGRQVHAFVVKTNF---VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            D+    ++HA +V+T     V +V V NALL++Y+K   +  AR +F +M   D VS N
Sbjct: 253 NDVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMN 312

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VMI  +A     KES+++FRE+      +    F+++++  +    L+ G++IH + +  
Sbjct: 313 VMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEP 372

Query: 305 T-----AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                  +  V V  +LV MY KCG  E+AK +F  ++  ++V W AM++A   +G  +E
Sbjct: 373 VLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDE 432

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF--MSNVFSGSAL 417
           A           +  D A+F S+L A +    L +    H  ++ S F  +    +   +
Sbjct: 433 AAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRCM 491

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +D+ A+SG L DA +    MP   + ++W  L+  C   G  +    + E       +P 
Sbjct: 492 VDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFN--LEPQ 549

Query: 477 SVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK--YKLRPKK 513
           + +  ++LS+  S  G  +E ++  +SM ++   KL P +
Sbjct: 550 NTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGR 589



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 30/201 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V    L+S Y K G L  A+ +F +M  + +VSW  ++   + + Q  EA        
Sbjct: 382 NVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAA 441

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN--SLVDSYCKIR 122
            + G + D  +F ++L  CS           H+ +++  Y+   ++ +   LV +    R
Sbjct: 442 CE-GVELDSASFISVLIACS-----------HSGMLEVAYDHFQLMLSDFDLVPAAENYR 489

Query: 123 CL-DLARR---------VFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           C+ DL  R         +   MP   D++++  L+ G   +G  E A       Q    +
Sbjct: 490 CMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAAS--AAEQAFNLE 547

Query: 172 PSD---FTFAAALSAGVGLAD 189
           P +   +T  ++L +  G  D
Sbjct: 548 PQNTAPYTLLSSLYSATGKKD 568


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/697 (35%), Positives = 399/697 (57%), Gaps = 4/697 (0%)

Query: 4   QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           QN VS  N LI+ +   G +  A +LF+ M +   +SW  +I  YS +    + F +F D
Sbjct: 177 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 236

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G   PD  T  +L+S C+  D  +    +H+  ++   +S + + N+LV+ Y    
Sbjct: 237 MRHHG-LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A  +F  M ++D +S+N +I+ + +   + +A+K   ++ H    P+  TF++AL 
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 355

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      +  G+ VHA V++ +   N+ V N+L+ +Y K + + +A K+F  MP  D VS
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 415

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQT 301
           YNV+I  YA  E   +++++F  ++      +      +    A+  DL   GR +H   
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYI 475

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I T  +S+  VANSL+ MYAKCG  E +  IF ++++ + V W A+I+A VQ G+ EEAL
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEAL 535

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LFI+M  A    D+   A  L + A LASL  G QLH   ++SG  S+ +  +A +DMY
Sbjct: 536 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 595

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + + +Q   +   R    WN LIS  A+ G  +   ++F+ MV +G +PD V+ +
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 655

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           ++LSACSH GL+++G+ Y+NSM   + + P  +H   +VD+L R G F EAEK + +MP 
Sbjct: 656 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 715

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P++++W S+++S R HKNLE  +K A +L +++   D+A YV +SN+YA   +W  V +
Sbjct: 716 LPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSA-YVLLSNLYATNARWADVDK 774

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           ++  M+   + K  A SW++LK++V  F   D  H    +I  K++ ++ ++++ GY  D
Sbjct: 775 LRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIAD 834

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
           TS ALHD DEE K ++L  HSE+LA+A+ LI  PEGS
Sbjct: 835 TSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 871



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 295/584 (50%), Gaps = 4/584 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y   G ++ A+ LF  M +R  VSWT L+   S      EA + +  MR D G   
Sbjct: 85  LLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRD-GVPC 143

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +   FAT++S C   +     +QV + +I  G  + + + NSL+  +  +  +  A ++F
Sbjct: 144 NANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLF 203

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M + D++S+NA+I+ ++ +G+  +   +F +M+H G +P   T  + +S        +
Sbjct: 204 DRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFS 263

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H+  ++++   +V V NAL+++YS    + +A  LF  M   D +S+N MI+ Y 
Sbjct: 264 HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYV 323

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    ++LK   +L  T    +   FS+ L   ++   L  G+ +H   +  +    + 
Sbjct: 324 QNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL 383

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ MY KC   E+A+++F ++     V +  +I  Y    +  +A+ +F  M  A 
Sbjct: 384 VGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG 443

Query: 372 ISADQATFASILRASAELASL-SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           I  +  T  +I  + A    L + G+ LH+++IR+GF+S+ +  ++L+ MYAK G+L+ +
Sbjct: 444 IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  +  +NIVSWNA+I+A  Q G  +  LK F DM  +G + D V L   LS+C+  
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             +EEG+Q  + +  K  L        + +D+  + G  DE  +++      P +  W++
Sbjct: 564 ASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQC-WNT 621

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           +I+    +   + A++   Q+    +  D   +VA+ +  + AG
Sbjct: 622 LISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAG 665



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 285/616 (46%), Gaps = 54/616 (8%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M DRT  +W   + G  +  +   AF++   MR  G     +   A+L++ C E    +E
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFA-LASLVTAC-ERRGRDE 58

Query: 92  LIQ----VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
            I     +HA   + G    + I  +L+  Y     +  A+R+F EMP+++ VS+ AL+ 
Sbjct: 59  GIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMV 118

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
             +  G  EEA++ + +M+  G   +   FA  +S    L +   G QV + V+ +    
Sbjct: 119 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
            V VAN+L+ ++     V +A KLF  M E D +S+N MI+ Y+      +   +F +++
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                       +L+SV A+      G  IH+  + ++  S V V N+LV+MY+  G+  
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ +F N+S    + W  MIS+YVQ  N  +AL    ++   N S +  TF+S L A +
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  GK +H+ V++     N+  G++L+ MY K  S++DA + F+ MP  +IVS+N 
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNV 418

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL-------------------------- 481
           LI   A   D    ++ F  M  +G +P+ ++++                          
Sbjct: 419 LIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRT 478

Query: 482 ----------SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
                     S+++  + CG +E     FNS+T K  +      + +++    + G  +E
Sbjct: 479 GFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS-----WNAIIAANVQLGHGEE 533

Query: 532 AEKLMAQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV--AM 586
           A KL   M     + D +  +  ++SC    +LE   +       M+   D+  YV  A 
Sbjct: 534 ALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL--HGLGMKSGLDSDSYVVNAA 591

Query: 587 SNIYAVAGQWESVSQV 602
            ++Y   G+ + + QV
Sbjct: 592 MDMYGKCGKMDEMLQV 607



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 35/361 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + VS N+L                               IGGY+      +A ++F
Sbjct: 408 MPTHDIVSYNVL-------------------------------IGGYAVLEDGTKAMQVF 436

Query: 61  VDMRTDGGSDPDYVTFATLL-SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             MR+  G  P+Y+T   +  S  S  D  N    +HA II+ G+ S   + NSL+  Y 
Sbjct: 437 SWMRS-AGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   L+ +  +F  +  K+ VS+NA+I    + G  EEA+KLF++MQH G K      A 
Sbjct: 496 KCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAE 555

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            LS+   LA +  G Q+H   +K+    + +V NA +D+Y K   + E  ++  +     
Sbjct: 556 CLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 615

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              +N +I+ YA    +KE+ + F+++  T        F  LLS  ++   +  G   + 
Sbjct: 616 QQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYN 675

Query: 300 QTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNL 357
               +  +S  +K    +VD+  + GRF EA++    +  + + + W +++S+     NL
Sbjct: 676 SMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNL 735

Query: 358 E 358
           E
Sbjct: 736 E 736


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 356/596 (59%), Gaps = 15/596 (2%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A++    M+  G      T++  +        +  G++VH  +    +   +FV N LL+
Sbjct: 39  AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK----LFRELQFTRFDR 273
           +Y K + + EA  LF EMPE + VS+  MI+ Y+ N+   ++LK    +FRE        
Sbjct: 99  MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFRE----GVRP 153

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           + F +S++L       +L   RQ+H   I T   S+V V ++L+D+Y+K    + A  +F
Sbjct: 154 NMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVF 210

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +     V W ++I  + Q  +  EALNLF  M RA   ADQAT  S+LRA   LA L 
Sbjct: 211 DEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LG+Q+H  V++  F  ++   +AL+DMY K GSL+DA   F  M E++++SW+ +++  A
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           QNG ++  L+ FE M +SG +P+ +++L VL ACSH GL+E+G  YF SM + + + P +
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           EHY  ++D+L R+G  DEA KL+ +M  EPD + W +++ +CR+H+N++ A  AA ++ +
Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE 448

Query: 574 MEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
           +E   DA  Y+ +SNIYA   +WE V++V+K M  RG+RK    SW+E+  ++HVF   D
Sbjct: 449 LEP-EDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGD 507

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN 693
             HP+  EI +++ +L++ +   GY PDT+  L D + E K +SL+YHSE+LAI F L+N
Sbjct: 508 TSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMN 567

Query: 694 TPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
                 + + KNLR C DCH   K++S++  R I +RD  R+HHF+DG CSC D+W
Sbjct: 568 LSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 215/426 (50%), Gaps = 22/426 (5%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   D +T++ L+  CS      E  +VH  I   GY   + + N+L++ Y K   L+ A
Sbjct: 50  GVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEA 109

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F EMP+++ VS+  +I+ ++ + LN++A+K  + M   G +P+ FT+++ L A  GL
Sbjct: 110 EDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPNMFTYSSVLRACDGL 168

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++   RQ+H  ++KT    +VFV +AL+D+YSK   +  A  +F EMP  D V +N +I
Sbjct: 169 PNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A N    E+L LF+ ++   F   Q   +++L        L++GRQ+H    V    
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH--VLKFD 283

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++ + N+L+DMY KCG  E+A   F+ +     + W+ M++   Q G   +AL LF  M
Sbjct: 284 QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM 343

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-------GSALLDM 420
             +    +  T   +L A +    +  G     +  RS  M  +F           L+D+
Sbjct: 344 KESGSRPNYITVLGVLFACSHAGLVEKG----WYYFRS--MKKLFGVDPGREHYGCLIDL 397

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
             ++G L +A++   EM  E + V+W  L+ AC  + +    + + + +++   +P+   
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE--LEPEDAG 455

Query: 480 LLSVLS 485
              +LS
Sbjct: 456 TYILLS 461



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 221/496 (44%), Gaps = 61/496 (12%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L++ YVK   L  A +LF+ M +R  VSWT +I  YS K    +A K  + M  +G 
Sbjct: 93  VNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREG- 150

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T++++L  C   D    L Q+H  IIK G  S + + ++L+D Y K   LD A 
Sbjct: 151 VRPNMFTYSSVLRAC---DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF EMP +D V +N++I GFA+     EA+ LF  M+  GF     T  + L A  GLA
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLA 267

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LGRQVH  V+K  F +++ + NAL+D+Y K   + +A   F  M E D +S++ M+ 
Sbjct: 268 LLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVA 325

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             A N   +++L+LF  ++ +    +      +L   ++   ++ G            + 
Sbjct: 326 GLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVD 385

Query: 309 EVKVA-NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +     L+D+  + GR +EA ++   +     +V W  ++ A                
Sbjct: 386 PGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA---------------- 429

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
            CR + + D A +A+  +   EL     G  +         +SN+         YA +  
Sbjct: 430 -CRVHRNVDLAIYAA--KKIIELEPEDAGTYI--------LLSNI---------YANTQR 469

Query: 427 LKDAIQTFKEMPERNI-----VSW-------NALISACAQNGDAQATLKSFEDMVQS--- 471
            +D  +  K M  R I      SW       +  I     +   +  ++   D+++    
Sbjct: 470 WEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMG 529

Query: 472 -GYQPDSVSLLSVLSA 486
            GY PD+  +L  L  
Sbjct: 530 VGYVPDTNFVLQDLEG 545



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 22/220 (10%)

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
           P     + +  + +L  A+     M R  + AD  T++ +++  +   ++  GK++H  +
Sbjct: 22  PLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHI 81

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
              G+   +F  + LL+MY K   L++A   F EMPERN+VSW  +ISA +   + +A L
Sbjct: 82  FCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKA-L 140

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQYFNSMTQKYKLRPKKE 514
           K    M + G +P+  +  SVL AC         HCG+I+ GL+          +R    
Sbjct: 141 KCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLE------SDVFVR---- 190

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             ++++D+  +    D A  +  +MP   D ++W+S+I  
Sbjct: 191 --SALIDVYSKWSDLDNALGVFDEMPTR-DLVVWNSIIGG 227



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 34/181 (18%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N LI  Y K G+L  A   F+ MV++  +SW+ ++ G +Q    R+A +LF  
Sbjct: 283 DQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFES 342

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ + GS P+Y+T   +L  CS           HA +++ G+     +            
Sbjct: 343 MK-ESGSRPNYITVLGVLFACS-----------HAGLVEKGWYYFRSM------------ 378

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
                +++F   P ++   +  LI    + G  +EA+KL  EM+    +P   T+   L 
Sbjct: 379 -----KKLFGVDPGRE--HYGCLIDLLGRAGRLDEAVKLIHEME---CEPDSVTWRTLLG 428

Query: 183 A 183
           A
Sbjct: 429 A 429


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/664 (36%), Positives = 368/664 (55%), Gaps = 7/664 (1%)

Query: 92  LIQVHADIIKFG--YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK--DSVSFNALIT 147
           L Q+HA +IK G    S     + L  +      L  A  +F+  P+    +  +N L+ 
Sbjct: 32  LPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFK-PSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
            F   G  E+A+ LF+EM H     P+D  T A AL +   +  + +GR V A+ VK   
Sbjct: 92  AFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL 151

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
           V + FV ++L+ +Y+    V  AR +F    E   V +N ++  Y  N  + E +++F+ 
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +        +    ++++      D ++G+ +             K+  +L+DMYAKCG 
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             +A+ +F  +     V W+AMIS Y Q     EAL LF EM  A +  +  T  S+L A
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            A L +L  GK +HS+V R         G+AL+D YAK G + DA++ F+ MP +N  +W
Sbjct: 332 CAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTW 391

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            ALI   A NG  +  L+ F  M ++G +P  V+ + VL ACSH  L+EEG ++F+SM +
Sbjct: 392 TALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMAR 451

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            Y ++P+ EHY  MVD+L R+G  DEA + +  MP EP+ ++W ++++SC +H+N+   +
Sbjct: 452 DYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGE 511

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           +A  Q+  +     +  YV +SNIYA AGQW+  + V+K M++RG+ K    S +EL   
Sbjct: 512 EALKQIISLNP-SHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGV 570

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           V  F A D  HP+  EI +K+E ++  +K  GY P+T+    + +E  K  S+ +HSE+L
Sbjct: 571 VFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKL 630

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF L+    G+ I + KNLR C DCH+A KLISK+  REI VRD + FHHFKDG CSC
Sbjct: 631 AIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSC 690

Query: 746 RDFW 749
            D+W
Sbjct: 691 NDYW 694



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 212/468 (45%), Gaps = 26/468 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVS-----------------------WTILIGGYS 48
           L +  +KSG L  + + F+S+++  A S                       + +L+  + 
Sbjct: 35  LHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFL 94

Query: 49  QKNQFREAFKLFVDMRTDGGSDP-DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
                 +A  LF++M     + P D  T A  L  CS     +    V A  +K G  + 
Sbjct: 95  HAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVAD 154

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
             + +SL+  Y     +  AR VF    +   V +NA++  + K G   E +++F  M  
Sbjct: 155 RFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLE 214

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           +G    + T  + ++A   + D  LG+ V   V +     N  +  AL+D+Y+K   + +
Sbjct: 215 VGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGK 274

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR+LF  M   D V+++ MI+ Y   +Q +E+L LF E+Q  R + +     ++LS  A 
Sbjct: 275 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAV 334

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L+ G+ +H+            +  +LVD YAKCG  ++A E F ++   ++  WTA+
Sbjct: 335 LGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 394

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-G 406
           I      G   EAL LF  M  A I     TF  +L A +    +  G++    + R  G
Sbjct: 395 IKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYG 454

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA 453
               V     ++D+  ++G + +A Q  + MP E N V W AL+S+CA
Sbjct: 455 IKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCA 502



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 3/247 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      L+  Y K G +  AR LF+ M  R  V+W+ +I GY+Q +Q REA  LF +M
Sbjct: 254 RNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEM 313

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +     +P+ VT  ++LS C+          VH+ + +   +   I+  +LVD Y K  C
Sbjct: 314 QL-ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGC 372

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A   F+ MP K+S ++ ALI G A  G   EA++LF  M+  G +P+D TF   L A
Sbjct: 373 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432

Query: 184 GVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGV 241
                 +  GR+    + +   ++  V     ++DL  +   V EA +    MP E + V
Sbjct: 433 CSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492

Query: 242 SYNVMIT 248
            +  +++
Sbjct: 493 IWRALLS 499


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/704 (35%), Positives = 389/704 (55%), Gaps = 40/704 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC---KIRCLDLARRVFKEM 134
           +LL  C    T   L  +HA +IK G ++     + L++          L  A  VF  +
Sbjct: 7   SLLHNCK---TLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSI 63

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
            + + + +N +  G A       A+ L+V M  LG  P+ +TF   L A         G+
Sbjct: 64  QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123

Query: 195 QVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVVE------------ 227
           Q+H  V+K     +++V  +L+ +Y               S H  VV             
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183

Query: 228 ----ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
               A+K+F E+P  D VS+N +I+ YA    YKE+L+LF+E+  T     +    T+LS
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             A    +++GRQ+H+        S +K+ N+L+D+Y KCG  E A  +F  LS+   + 
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV- 402
           W  +I  Y      +EAL LF EM R+  S ++ T  SIL A A L ++ +G+ +H ++ 
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363

Query: 403 IRSGFMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            R   +SN  S  ++L+DMYAK G ++ A Q F  M  R++ SWNA+I   A +G A   
Sbjct: 364 KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPA 423

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
              F  M + G +PD ++ + +LSACSH G+++ G   F SMT+ YK+ PK EHY  M+D
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMID 483

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +L  SG F EAE+++  M  +PD ++W S++ +C++H N+E  +  A  L K+E  +++ 
Sbjct: 484 LLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEP-KNSG 542

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
            YV +SNIYA AG+W  V++ +  + ++G++KV   S +E+ S VH F   D+LHP+  E
Sbjct: 543 SYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNRE 602

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           I   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ + 
Sbjct: 603 IYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 662

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           ++KNLR C +CH A KLISKI  REI  RD +RFHHF DG CSC
Sbjct: 663 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 220/474 (46%), Gaps = 36/474 (7%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F+S+ +   + W  +  G++  +    A  L+V M    G  P+  TF  LL
Sbjct: 52  GLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM-ISLGLVPNSYTFPFLL 110

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
             C++     E  Q+H  ++K G +  L +  SL+  Y K    + AR+VF         
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170

Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                  E+P KD VS+NALI+G+A+ G  +EA++LF EM    
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            KP + T    LSA    A I LGRQVH+++    F  N+ + NAL+DLY K   V  A 
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  Y     YKE+L LF+E+  +    ++    ++L   A+  
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350

Query: 290 DLQIGRQIHT--QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            + IGR IH      +    +   +  SL+DMYAKCG  E A+++F ++ + S   W AM
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
           I  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +  S      
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYK 470

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
               +     ++D+   SG  K+A +    M  + + V W +L+ AC  +G+ +
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 184/360 (51%), Gaps = 5/360 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI GY  +G + +A+++F+ +  +  VSW  LI GY++   ++EA +LF +
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T+LS C++  +     QVH+ I   G+ S L I N+L+D Y K  
Sbjct: 226 MMKT-NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD +S+N LI G+    L +EA+ LF EM   G  P++ T  + L 
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILP 344

Query: 183 AGVGLADIALGRQVHAFVVK-TNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I +GR +H ++ K    V N   +  +L+D+Y+K   +  A+++F  M     
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+N MI  +A + +   +  +F  ++    +     F  LLS  ++   L +GR I   
Sbjct: 405 SSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                 I+ +++    ++D+    G F+EA+E+  ++      V W +++ A    GN+E
Sbjct: 465 MTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 41/333 (12%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE---AKEIFANLSH 338
           LS++ N   LQ  R IH + I T   +     + L++       F+    A  +F ++  
Sbjct: 6   LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + + W  M   +    +   AL L++ M    +  +  TF  +L+A A+  +   G+Q+
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT------------------------- 433
           H  V++ G   +++  ++L+ MY K+G  +DA +                          
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185

Query: 434 ------FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                 F E+P +++VSWNALIS  A+ G+ +  L+ F++M+++  +PD  ++++VLSAC
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    IE G Q  +S    +      +   +++D+  + G  + A  L   + ++ D I 
Sbjct: 246 AQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVIS 303

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           W+++I     H NL    K A  LF+ E LR  
Sbjct: 304 WNTLIGG-YTHMNL---YKEALLLFQ-EMLRSG 331


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/753 (32%), Positives = 408/753 (54%), Gaps = 9/753 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+++ +  N++I  Y++ G    A ++F+ M D+  V+WT LI  ++    F +A  LF 
Sbjct: 47  PDESLLE-NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFR 105

Query: 62  DMRTDGGSDPDYVTFAT-LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M   G S PD +TF + LL         +E  +VH+ I++ GY    ++ N +V+ Y K
Sbjct: 106 KMLLSGVS-PDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGK 164

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A  VF  +   +  S+  +I  +A+ G   E ++L   M   G KP  +TF   
Sbjct: 165 CGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTV 224

Query: 181 LSAGVGLADIALGRQVHAFVVK-TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A   +  +   + +HA  +  T    +  V  AL++LY K   + EA  +F ++   D
Sbjct: 225 LGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKD 284

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS++ MI  +A + Q K +++L   +       +   F  +L  V +    Q G++IH 
Sbjct: 285 IVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHA 344

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           + +      +V + ++LV MY   G  E A+ IF +      V W++MI+ Y Q  +   
Sbjct: 345 RIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR 404

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL+LF EM    +  +  TF S + A A + +L  G QLH  V   G   +V   +AL++
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVN 464

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           +Y K G L++A   F  M ++N+++W ++  A  QNG    +LK    M   G +PD + 
Sbjct: 465 LYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIV 524

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +++L +C++ G + +GL Y+N MTQ + + P  EH   MVDIL R+G  + AE+L+  M
Sbjct: 525 FVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTM 584

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            FE   + W  ++ +C+ H +   A +AA+++F++E  ++A PYV +S+++  AG WE+ 
Sbjct: 585 KFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEP-KNATPYVLLSSVFCAAGSWEAA 642

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ--TNEIRRKIENLMQEMKKEG 657
            + ++ M  RGV+++   S +E+  +VH F A  ++ P     EI   +E L +EM+  G
Sbjct: 643 EETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAG 702

Query: 658 YKPD-TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           Y PD T+  L D +E  K  ++ YHSE LA+   +I+TP G+P+ + KNLR C+DCH A 
Sbjct: 703 YVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIAT 762

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K +SK+  R I+VRD  R HHF++G CSC D+W
Sbjct: 763 KFVSKLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 158/314 (50%), Gaps = 19/314 (6%)

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-----VANSLVDMYAKCGRFEEAKEIF 333
           + +L+  ++   L  G+++H   +  + + + +     + N ++ MY +CG  + A ++F
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI-LRASAELASL 392
             +   + V WT++ISA+   G+  +A+ LF +M  + +S D+ TF SI L+ S    +L
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GK++HS ++++G+  +    + +++MY K G ++ A   F  + + N+ SW  +I+A 
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           AQNG     L+    M Q+G +PD  +  +VL AC+  G +EE      +      L   
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK----KAA 568
                +++++  + G  +EA  +  Q+    D + WSS+I +        FA+    K+A
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQID-NKDIVSWSSMIAA--------FAQSGQAKSA 304

Query: 569 DQLFKMEKLRDAAP 582
            QL  +  L    P
Sbjct: 305 IQLLMLMDLEGVRP 318


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/747 (32%), Positives = 407/747 (54%), Gaps = 3/747 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+VS    +S YV+ G +  A +LF +M       W ++I G+     F +A   +  M
Sbjct: 58  RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              GG   D  T+  ++  C       E  +VH  +IK G +  + I NSL+  Y KI C
Sbjct: 118 EF-GGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGC 176

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A  VF+EMP +D VS+N++I+G+   G    ++  F EMQ  G K   F+    L A
Sbjct: 177 IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGA 236

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G+++H  ++++    +V V  +L+D+Y+K   +  A +LF ++ +   V++
Sbjct: 237 CSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAW 296

Query: 244 NVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N MI  Y+ N Q  ES    R++Q   +          LL   A    + +G+ +H   I
Sbjct: 297 NAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAI 356

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +  + +  +LVDMY +CG+ + A+ +F  ++  + + W AMI++Y + G   +A+ 
Sbjct: 357 RNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMT 416

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF ++C   +  D  T ASIL A AELASL   +Q+H +V +    SN F  ++++ MY 
Sbjct: 417 LFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYG 476

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G+L  A + F  M  ++++SWN +I A A +G  + +++ F +M + G++P+  + +S
Sbjct: 477 KCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVS 536

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L +CS  GL+ EG +YFNSM + Y + P  EHY  ++D++ R+G  D A+  + +MP  
Sbjct: 537 LLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLA 596

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P   +W S++ + R   ++E A+ AA+ +  +E   +   YV +SN+YA AG+WE V ++
Sbjct: 597 PTARIWGSLLTASRNKGDVELAEIAAEHILSLEH-DNTGCYVLLSNMYAEAGRWEDVERI 655

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           K  M++ G+ K    S V+L SK   F   D    + N +   ++ + +++ ++ Y    
Sbjct: 656 KFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSL 715

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           +     + E+ +  S K HS RLAI F LI+T  G+P+LV KN+R C  CH   K IS+ 
Sbjct: 716 TKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISET 775

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
           T REI VRDS  FHHF  G CSC D+W
Sbjct: 776 TKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 6/170 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + NT  +N ++  Y K GNL  ARE+F+ M  +  +SW  +I  Y+     R + +LF +
Sbjct: 462 DSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSE 521

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           MR + G +P+  TF +LL  CS     NE  +    + + +  N  +     ++D   + 
Sbjct: 522 MR-EKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRT 580

Query: 122 RCLDLARRVFKEMPQKDSVS-FNALITGFAKEG---LNEEAIKLFVEMQH 167
             LD A+   +EMP   +   + +L+T    +G   L E A +  + ++H
Sbjct: 581 GNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEH 630


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/713 (32%), Positives = 391/713 (54%), Gaps = 23/713 (3%)

Query: 39  SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHAD 98
           ++ +LI  Y+  +  + +F  ++ MR++  +  D     +LL  C++  + +   ++H  
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 99  IIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
             K G+ S + +CN+L++ Y K  CL  AR VF +MP++D VS+  ++  + +     EA
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173

Query: 159 IKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA--NALL 216
           ++L  EMQ +G K S     + ++    L D+  GR VH ++V+    E + V+   AL+
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+Y K  C+  A++LF  + +   VS+ VMI     + +  E  K F  +   +   ++ 
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
              +L++       L +G+  H   +       + +  +L+DMY KCG+   A+ +F  +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                  W+ +ISAY     +++  NLF+EM   ++  +  T  S+L   AE  +L LGK
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
             H+++ R G   +V   +AL++MYAK G +  A   F E  +R+I  WN +++  + +G
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
             +  L+ F +M   G +P+ ++ +S+  ACSH GL+E                    HY
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME--------------------HY 513

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             +VD+L R+G  DEA  ++  MP  P+ I+W +++ +C++HKNL   + AA ++ +++ 
Sbjct: 514 GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDP 573

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
            ++    V  SNIYA A +W  V+ V++AM   G++K    SW+E+   VH F + D+  
Sbjct: 574 -QNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKAC 632

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
            QT ++   +  +  ++++ GY P+T+  L + DEE K  +L YHSE+LA AF LI+T  
Sbjct: 633 TQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAP 692

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G+PI ++KNLR C DCHAA KL+SKI GR I VRD +RFHHF +G+CSC  +W
Sbjct: 693 GTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 383/675 (56%), Gaps = 75/675 (11%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   FA LL  C    +  +  ++HA IIK  ++S + I N LVD+Y K    + AR+VF
Sbjct: 18  DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77

Query: 132 KEMPQK-------------------------------DSVSFNALITGFAKEGLNEEAIK 160
             MPQ+                               D  S+NA+++GFA+    EEA++
Sbjct: 78  DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
            FV+M    F  ++++F +ALSA  GL D+ +G Q+HA + K+ ++ +V++ +AL+D+YS
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   V  A++ F  M   + VS+N +ITCY  N    ++L++F  +     +  +   ++
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF------ 333
           ++S  A+   ++ G QIH + +      +++ + N+LVDMYAKC R  EA+ +F      
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 334 -------------------------ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
                                    +N+   + V W A+I+ Y Q G  EEA+ LF+ + 
Sbjct: 318 NVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM------SNVFSGSALLDMYA 422
           R +I     TF ++L A A LA L LG+Q H+ +++ GF       S++F G++L+DMY 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYM 437

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++D    F+ M ER++VSWNA+I   AQNG     L+ F  M+ SG +PD V+++ 
Sbjct: 438 KCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIG 497

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG +YF+SM  +  L P K+H+  MVD+L R+GC DEA  L+  MP +
Sbjct: 498 VLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQ 557

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W S++ +C++H N+E  K  A++L +++ L ++ PYV +SN+YA  G+W+ V +V
Sbjct: 558 PDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPL-NSGPYVLLSNMYAELGRWKDVVRV 616

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR+RGV K    SW+E++S+VHVF   D+ HP   +I   ++ L ++MK  GY P+ 
Sbjct: 617 RKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEA 676

Query: 663 SCALHDEDEEIKVES 677
                D+DE  + ES
Sbjct: 677 -----DDDEICEEES 686



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 250/499 (50%), Gaps = 41/499 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT S N ++S   K G L  A  +F SM +    SW  ++ G++Q ++F EA + F
Sbjct: 80  MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           VDM ++     +Y +F + LS C+     N  IQ+HA I K  Y   + + ++LVD Y K
Sbjct: 140 VDMHSEDFVLNEY-SFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSK 198

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A+R F  M  ++ VS+N+LIT + + G   +A+++FV M   G +P + T A+ 
Sbjct: 199 CGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASV 258

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP--- 236
           +SA    + I  G Q+HA VVK + +  ++ + NAL+D+Y+K   V EAR +F  MP   
Sbjct: 259 VSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRN 318

Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                       E + VS+N +I  Y  N + +E+++LF  L+ 
Sbjct: 319 VVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F  LL+  AN  DL++GRQ HTQ +       +   S++ V NSL+DMY K
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMK 438

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E+   +F  +     V W AMI  Y Q G    AL +F +M  +    D  T   +
Sbjct: 439 CGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGV 498

Query: 383 LRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
           L A +    +  G++  HS     G        + ++D+  ++G L +A    + MP + 
Sbjct: 499 LSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQP 558

Query: 441 NIVSWNALISACAQNGDAQ 459
           + V W +L++AC  +G+ +
Sbjct: 559 DNVVWGSLLAACKVHGNIE 577



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 37/313 (11%)

Query: 261 KLFRELQFTRFDRSQFPFSTLL-SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           KL  EL F   D S  PF+ LL S V +K  +   R+IH + I T   SE+ + N LVD 
Sbjct: 9   KLVGELCF--LDSS--PFAKLLDSCVRSKSGID-ARRIHARIIKTQFSSEIFIQNRLVDA 63

Query: 320 YAKCGRFEEAKEIFANLSHIST-------------------------VP------WTAMI 348
           Y KCG FE+A+++F  +   +T                         +P      W AM+
Sbjct: 64  YGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMV 123

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           S + Q    EEAL  F++M   +   ++ +F S L A A L  L++G Q+H+ + +S ++
Sbjct: 124 SGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYL 183

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            +V+ GSAL+DMY+K G +  A + F  M  RNIVSWN+LI+   QNG A   L+ F  M
Sbjct: 184 LDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMM 243

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           + +G +PD ++L SV+SAC+    I EGLQ    + ++ K R       ++VD+  +   
Sbjct: 244 MDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRR 303

Query: 529 FDEAEKLMAQMPF 541
            +EA  +  +MP 
Sbjct: 304 VNEARLVFDRMPL 316


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/604 (38%), Positives = 357/604 (59%), Gaps = 32/604 (5%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           F+  L + + L  +  G+QVH+ ++ +   ++ F++N LL+ YSK      +  LF  MP
Sbjct: 65  FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124

Query: 237 EVDGVSYNVMITCY----------------------AWN---------EQYKESLKLFRE 265
             + +S+N++I  Y                       WN         E  K++L LF+E
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +    F   +F   ++L   A    L  G+++H   +         V +SL  MY K G 
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             + +++  ++   + V W  +I+   Q G  EE LN +  M  A    D+ TF S+L A
Sbjct: 245 LSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSA 304

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
            +ELA+L  G+Q+H+ VI++G  S +   S+L+ MY++SG L+D+I+ F +    ++V W
Sbjct: 305 CSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLW 364

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           +++I+A   +G  +  L+ F  M     + + V+ LS+L ACSH GL E+G +YF+ M +
Sbjct: 365 SSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVK 424

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           KYKL+P+ EHY  +VD+L R+G  +EAE ++  MP +PD I+W +++ +C++HK  E A+
Sbjct: 425 KYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAE 484

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           + ++++ K++ L DAA YV +SNI+A A  W +VSQ++KAMR+R VRK    SW+ELK+ 
Sbjct: 485 RISEEIIKLDPL-DAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNL 543

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           VH F+  D+ HPQ  EI   ++ LM E+K+ GY P+    LHD D E K  +L +HSE+ 
Sbjct: 544 VHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKF 603

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAFAL+NT E  PI VMKNLR C DCH AIK IS+I  REI VRD+SRFHHFKDG CSC
Sbjct: 604 AIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSC 663

Query: 746 RDFW 749
            ++W
Sbjct: 664 GNYW 667



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 191/361 (52%), Gaps = 2/361 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N L++ Y ++  L+ A+++F EM +++  ++NA+I G  +   N++A+ LF EM  LGF 
Sbjct: 132 NILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFL 191

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P +FT  + L    GL  +  G++VHA ++K  F  +  V ++L  +Y K   + +  KL
Sbjct: 192 PDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKL 251

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
              MP    V++N +I   A N   +E L  +  ++   F   +  F ++LS  +    L
Sbjct: 252 IKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATL 311

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G+QIH + I   A S + V +SL+ MY++ G  E++ + F +  +   V W++MI+AY
Sbjct: 312 GQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAY 371

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G  EEAL LF +M    + A++ TF S+L A +       G +    +++       
Sbjct: 372 GFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPR 431

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +   + ++D+  ++G L++A    + MP + + + W  L++AC  + +A+   +  E+++
Sbjct: 432 IEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEII 491

Query: 470 Q 470
           +
Sbjct: 492 K 492



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 188/352 (53%), Gaps = 3/352 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N +S N+LI+GY++ G+L +A++LF+ M +R   +W  +I G +Q    ++A  LF
Sbjct: 123 MPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLF 182

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M    G  PD  T  ++L GC+   +     +VHA ++K G+    ++ +SL   Y K
Sbjct: 183 KEM-YGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L    ++ K MP +  V++N LI G A+ G  EE +  +  M+  GF+P   TF + 
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 301

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA   LA +  G+Q+HA V+K      + V ++L+ +YS+  C+ ++ K F +    D 
Sbjct: 302 LSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDV 361

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V ++ MI  Y ++ + +E+L+LF +++  + + ++  F +LL   ++    + G +    
Sbjct: 362 VLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDL 421

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            +    +   ++    +VD+  + GR EEA+ +  ++      + W  +++A
Sbjct: 422 MVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 37/229 (16%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G +++A + F     + I +D + F+ +L++  +L SL  GKQ+HS +I SG   + F  
Sbjct: 45  GRIKQAYDTFT----SEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFIS 100

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS--- 471
           + LL+ Y+K G  K ++  F  MP RN++S+N LI+   Q GD ++  K F++M +    
Sbjct: 101 NHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIA 160

Query: 472 ----------------------------GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
                                       G+ PD  +L SVL  C+    +  G Q  ++ 
Sbjct: 161 TWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAG-QEVHAC 219

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             K          +S+  +  +SG   + EKL+  MP     + W+++I
Sbjct: 220 LLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRT-VVAWNTLI 267


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/727 (33%), Positives = 401/727 (55%), Gaps = 4/727 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ +     +  A  LF+ M +R  +SW  +I  YS +  + + F +  DMR  G  
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR-HGEV 242

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T  +L+S C+  D       +H+  +  G +  + + N+LV+ Y     LD A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLA 188
           +F+ M ++D +S+N +I+ + +     EA++   ++ Q     P+  TF++AL A     
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +HA +++ +    + + N+LL +YSK + + +  ++F  MP  D VS NV+  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQTIVTTAI 307
            YA  E    ++++F  ++ T    +      L     +  DL   G  +H     T  +
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S+  + NSL+ MYA CG  E +  IF+ +++ S + W A+I+A V+ G  EEA+ LF++ 
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
             A    D+   A  L +SA LASL  G QLH   +++G   +    +A +DMY K G +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
              ++T  +   R    WN LIS  A+ G  +    +F+ MV  G +PD V+ +++LSAC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GLI++G+ Y+NSM   + + P  +H   +VD+L R G F EAEK + +MP  P++++
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W S+++S R HKNL+  +KAA  L +++   D+A YV +SN+YA   +W  V +++  M+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSA-YVLLSNLYATNARWVDVDKLRSHMK 781

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
              + K  A SW++LK++V  F   D  H    +I  K++ ++ ++++ GY  DTS ALH
Sbjct: 782 TIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALH 841

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE K  +L  HSE+LA+A+ L+  PEGS I + KNLR C DCH   KL+S +  REI
Sbjct: 842 DTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREI 901

Query: 728 TVRDSSR 734
            +RD  R
Sbjct: 902 VLRDPYR 908



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 244/509 (47%), Gaps = 12/509 (2%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSE---PDT 88
           M  RT+ SW   + G ++      AF L   MR        +   A+L++ C      + 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGF-ALASLVTACEHRGWQEG 59

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
           A     +HA   + G    + I  +L+  Y     +  A+R+F EMPQ++ VS+ A++  
Sbjct: 60  AACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            +  G  EEA+  +  M+  G   +    A  +S    L D   G QV A VV +  + +
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           V VAN+L+ ++     V +A +LF  M E D +S+N MI+ Y+  E Y +   +  +++ 
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                      +L+SV A+   + +G  IH+  + +     V + N+LV+MY+  G+ +E
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS-ADQATFASILRASA 387
           A+ +F N+S    + W  MIS+YVQ  +  EAL    ++ + +    +  TF+S L A +
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  G+ +H+ +++    + +  G++LL MY+K  S++D  + F+ MP  ++VS N 
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNV 419

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG-LIEEGLQYFNSMTQ- 505
           L    A   D    ++ F  M  +G +P+ ++++++   C   G L   G+     +TQ 
Sbjct: 420 LTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQT 479

Query: 506 -----KYKLRPKKEHYASMVDILCRSGCF 529
                +Y        YA+  D+   +G F
Sbjct: 480 GLLSDEYITNSLITMYATCGDLESSTGIF 508



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 155/364 (42%), Gaps = 41/364 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + VS N+L  GY    ++A A  +F         SW                    
Sbjct: 409 MPCYDVVSCNVLTGGYAALEDVANAMRVF---------SW-------------------- 439

Query: 61  VDMRTDGGSDPDYVTFATLLSGC-SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             MR   G  P+Y+T   L   C S  D  +  + +HA + + G  S   I NSL+  Y 
Sbjct: 440 --MRGT-GIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYA 496

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
               L+ +  +F  +  K  +S+NA+I    + G  EEAIKLF++ QH G K   F  A 
Sbjct: 497 TCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAE 556

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---SKHDCVVEARKLFGEMP 236
            LS+   LA +  G Q+H   VK     +  V NA +D+Y    K DC+++        P
Sbjct: 557 CLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRP 616

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
                 +N +I+ YA    +KE+   F+ +           F  LLS  ++   +  G  
Sbjct: 617 T---QCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673

Query: 297 IHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPWTAMISAYVQK 354
            +     T  +S  +K    +VD+  + G+F EA++    +  +   + W +++S+    
Sbjct: 674 YYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTH 733

Query: 355 GNLE 358
            NL+
Sbjct: 734 KNLD 737


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/559 (39%), Positives = 341/559 (61%), Gaps = 6/559 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+Q+HA ++K+       V + L++ YSK    + + ++F E       +++ +I+ +A 
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 253 NEQYKESLKLFRELQFTRF--DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           NE+   +++ F  +       D   FP +T    +  + D  +G+ +H   I T    +V
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCD--VGKSVHCLVIKTGYDVDV 190

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V +SLVDMYAKCG  +EA+ +F  + H + V W+ MI  Y Q G  EEA+ LF E    
Sbjct: 191 FVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLE 250

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  +  T +S++R       L LGKQ+H    ++ +  + F GS+L+ +Y+K G ++ A
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F E+P +N+  WNA++ ACAQ+   +     F  M  +G +P+ ++ L VL ACSH 
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHA 370

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+EEG +YF ++ +KY++ P  +HYASMVD+L R+G   EA  ++  MP EP E +W +
Sbjct: 371 GLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGA 429

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
            I  CRIH N + A  AAD++F++  +  +  +V +SN YA AG++E  ++ +K +R+RG
Sbjct: 430 FITGCRIHGNTDLAAFAADKVFELGAV-SSGLHVMLSNAYAAAGRYEDAAKARKMLRDRG 488

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V+K T  SW+E  ++VH F A D  H +  EI +K+E+L +EM++ GY  DTS  L +  
Sbjct: 489 VKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVG 548

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            E K ++++YHSERLAIAF LI+ P G PI +MKNLR C DCH AIK ISK++GR I VR
Sbjct: 549 SEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVR 608

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFH F+DG CSC D+W
Sbjct: 609 DNNRFHRFEDGKCSCADYW 627



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA IIK G   I ++C+ L++ Y K +   L+ +VF+E  +K S +++++I+ FA+  
Sbjct: 75  QIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ-- 132

Query: 154 LNEE---AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
            NEE   AI+ F  M      P D  F +A  A   L    +G+ VH  V+KT +  +VF
Sbjct: 133 -NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V ++L+D+Y+K   + EAR +F EMP  + VS++ MI  Y    +++E+++LF+E     
Sbjct: 192 VGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEG 251

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            D + F  S+++ V  +   L++G+QIH     T+      V +SL+ +Y+KCG  E A 
Sbjct: 252 LDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAY 311

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   +   W AM+ A  Q  + +EA +LF +M  A +  +  TF  +L A +   
Sbjct: 312 RVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAG 371

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALI 449
            +  GK+  + + +          ++++D+  ++G L++A+   K MP     S W A I
Sbjct: 372 LVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFI 431

Query: 450 SACAQNGD 457
           + C  +G+
Sbjct: 432 TGCRIHGN 439



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 201/441 (45%), Gaps = 41/441 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           + LI+ Y K+     + ++F     +++ +W+ +I  ++Q  +   A + F  M  +   
Sbjct: 93  HYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLC 152

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D++ F +    C+     +    VH  +IK GY+  + + +SLVD Y K   +  AR 
Sbjct: 153 PDDHI-FPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARN 211

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EMP ++ VS++ +I G+ + G +EEA++LF E    G   +DFT ++ +        
Sbjct: 212 VFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATL 271

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+Q+H    KT++  + FV ++L+ LYSK   +  A ++F E+P  +   +N M+  
Sbjct: 272 LELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIA 331

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A +   KE+  LF +++      +   F  +L   ++   ++ G++             
Sbjct: 332 CAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPG 391

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            +   S+VD+  + G+ +EA      LS I  +P              E     FI  CR
Sbjct: 392 TQHYASMVDLLGRAGKLQEA------LSVIKGMPTEPT----------ESVWGAFITGCR 435

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            + + D A FA+      EL ++S G  LH                 L + YA +G  +D
Sbjct: 436 IHGNTDLAAFAA--DKVFELGAVSSG--LHVM---------------LSNAYAAAGRYED 476

Query: 430 AIQTFKEMPERNI-----VSW 445
           A +  K + +R +     +SW
Sbjct: 477 AAKARKMLRDRGVKKETGLSW 497



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 2/162 (1%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G+Q+H+ +I+SG          L++ Y+K+     + Q F+E   ++  +W+++IS
Sbjct: 69  SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           + AQN +    ++ F  M+     PD     S   AC+  G  + G +  + +  K    
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG-KSVHCLVIKTGYD 187

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                 +S+VD+  + G   EA  +  +MP   + + WS +I
Sbjct: 188 VDVFVGSSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMI 228


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/675 (34%), Positives = 370/675 (54%), Gaps = 39/675 (5%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            +  LL  C +  +  E  ++H   +K   N+   + + L   Y     + LARR+F E+
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P    + +N +I  +A  G  + AI L+  M HLG +P+ +T+   L A  GL  I  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H+         +VFV  AL+D Y+K   +VEA++LF  M   D V++N MI   +   
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              ++++L  ++Q    +    P S+                                  
Sbjct: 190 LCDDAVQLIMQMQ----EEGICPNSS---------------------------------- 211

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           ++V +   C     A++IF  +   + V W+AMI  YV    ++EAL++F  M  + I  
Sbjct: 212 TIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDP 271

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T   +L A + LA+L  G   H ++I  GF ++    +AL+DMY+K G +  A + F
Sbjct: 272 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 331

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M   +IVSWNA+I     +G     L  F D++  G +PD ++ + +LS+CSH GL+ 
Sbjct: 332 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 391

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG  +F++M++ + + P+ EH   MVDIL R+G  DEA   +  MPFEPD  +WS+++++
Sbjct: 392 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 451

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CRIHKN+E  ++ + ++  +        +V +SNIY+ AG+W+  + ++   ++ G++K+
Sbjct: 452 CRIHKNIELGEEVSKKIQSLGP-ESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              SW+E+   VH F   D+ H Q ++I RK+E L+ EMK+ GY+ + S    D +EE K
Sbjct: 511 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEK 570

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
            + L YHSE+LAIAF ++N   G PILV KNLR C DCH AIK ++ IT REITVRD++R
Sbjct: 571 EQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANR 630

Query: 735 FHHFKDGFCSCRDFW 749
           FHHFK+G C+C DFW
Sbjct: 631 FHHFKNGTCNCGDFW 645



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 203/452 (44%), Gaps = 41/452 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N ++   + L   Y+    +  AR LF+ + + + + W  +I  Y+    F  A  L+  
Sbjct: 40  NADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHS 99

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    G  P+  T+  +L  CS      + +++H+    FG  S + +C +LVD Y K  
Sbjct: 100 M-LHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A+R+F  M  +D V++NA+I G +  GL ++A++L ++MQ  G  P+  T    L 
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                                                    C++ ARK+F  M   + VS
Sbjct: 219 TC--------------------------------------QCLLYARKIFDVMGVRNEVS 240

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MI  Y  ++  KE+L +FR +Q +  D        +L   ++   LQ G   H   I
Sbjct: 241 WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 300

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
           V    ++  + N+L+DMY+KCG+   A+E+F  +     V W AMI  Y   G   EAL 
Sbjct: 301 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 360

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMY 421
           LF ++    +  D  TF  +L + +    +  G+     + R    +  +     ++D+ 
Sbjct: 361 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 420

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++G + +A    + MP E ++  W+AL+SAC
Sbjct: 421 GRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 452


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/665 (36%), Positives = 368/665 (55%), Gaps = 42/665 (6%)

Query: 86  PDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           PD    L  VH+ II     YNS L +   L+ +Y  ++ +  AR+VF E+P+++ +  N
Sbjct: 54  PDLKT-LRTVHSRIISEDLRYNSSLGV--KLMRAYASLKDVATARKVFDEIPERNVIIIN 110

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
            +I  +   G   E I++F  M     KP  +TF   L A     +I +G+++H    K 
Sbjct: 111 VMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKV 170

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
                +FV N L+ +Y K   + EAR +  EM   D VS+N ++  YA N+++ ++L++ 
Sbjct: 171 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVC 230

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           RE++  +        ++LL  V+N                T  +  VK      DM+ K 
Sbjct: 231 REMESVKISHDAGTMASLLPAVSN--------------TTTENVMYVK------DMFFKM 270

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G+              S V W  MI  Y++     EA+ L+  M       D  +  S+L
Sbjct: 271 GK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A  + ++LSLGK++H ++ R   + N+   +AL+DMYAK G L  A   F+ M  R++V
Sbjct: 318 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVV 377

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SW A+ISA   +G     +  F  M  SG  PDS++ ++ L+ACSH GL+EEG   F  M
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
           T  YK+ P+ EH A MVD+L R+G   EA K + +MP EP+E +W +++ +CR+H N + 
Sbjct: 438 TDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDI 497

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
              AAD+LF++     +  YV +SNIYA AG+WE V+ ++  M+ +G++K    S VE+ 
Sbjct: 498 GLLAADKLFQLAP-EQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 556

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
             +H F   D  HPQ+ EI R+++ L+++MK+ GY PD+  ALHD +EE K   L  HSE
Sbjct: 557 RIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 616

Query: 684 RLAIAFALINTPE---GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           +LAI FAL+NT E    + I + KNLR C DCH A KLIS+IT REI +RD++RFH F+ 
Sbjct: 617 KLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRF 676

Query: 741 GFCSC 745
           G CSC
Sbjct: 677 GVCSC 681



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 221/471 (46%), Gaps = 45/471 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y    ++ATAR++F+ + +R  +   ++I  Y     +RE  ++F  M       P
Sbjct: 81  LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTM-CSCHVKP 139

Query: 72  DYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D+ TF  +L  CS   + N +I  ++H    K G +S L + N LV  Y K   L  AR 
Sbjct: 140 DHYTFPCVLKACS--CSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 197

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           V  EM ++D VS+N+L+ G+A+    ++A+++  EM+ +       T A+ L A      
Sbjct: 198 VLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------ 251

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
                      V     ENV        +Y K         +F +M +   VS+NVMI  
Sbjct: 252 -----------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGV 284

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    E+++L+  ++   F+      +++L    +   L +G++IH        I  
Sbjct: 285 YMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 344

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + + N+L+DMYAKCG  + A+++F N+     V WTAMISAY   G   +A+ LF +M  
Sbjct: 345 LLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQD 404

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLK 428
           + +  D   F + L A +    L  G+     +     ++      A ++D+  ++G +K
Sbjct: 405 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 464

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
           +A +  +EMP E N   W AL+ AC  + +    L + + +      QSGY
Sbjct: 465 EAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGY 515



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 36/343 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K G L+ AR + + M  R  VSW  L+ GY+Q  +F +A ++  +M +   S
Sbjct: 180 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKIS 239

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D  T A+LL   S   T N +                                   + 
Sbjct: 240 H-DAGTMASLLPAVSNTTTENVM---------------------------------YVKD 265

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M +K  VS+N +I  + K  +  EA++L+  M+  GF+P   +  + L A    + 
Sbjct: 266 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSA 325

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++LG+++H ++ +   + N+ + NAL+D+Y+K  C+  AR +F  M   D VS+  MI+ 
Sbjct: 326 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISA 385

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
           Y ++ +  +++ LF ++Q +        F T L+  ++   L+ GR           I+ 
Sbjct: 386 YGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 445

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            ++    +VD+  + G+ +EA +    +    +   W A++ A
Sbjct: 446 RLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 34/179 (18%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI  Y K G L  AR++F +M  R  VSWT +I  Y    +  +A  LF  M+
Sbjct: 344 NLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD + F T L+ CS           HA +++ G +                 C 
Sbjct: 404 -DSGLVPDSIAFVTTLAACS-----------HAGLLEEGRS-----------------CF 434

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            L    +K  P+ + ++   ++    + G  +EA K   EM     +P++  + A L A
Sbjct: 435 KLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYKFIQEMP---MEPNERVWGALLGA 488


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/750 (32%), Positives = 404/750 (53%), Gaps = 13/750 (1%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVD 62
            ++ V  N +IS Y K G  + A  +F  +  +   +SW  ++G    +  F +    F  
Sbjct: 368  RDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-LIICNSLVDSYCKI 121
            M    G DP+ V+F  +L+ CS  +  +   ++H+ I+    + +   +   LV  Y K 
Sbjct: 428  MLL-AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486

Query: 122  RCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
              +  A  VFKEMP   +  V++N ++  +A+   ++EA    +EM   G  P   +F +
Sbjct: 487  GSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546

Query: 180  ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
             LS+     +     QV    +  +   +  +  AL+ ++ +   + +AR +F EM   D
Sbjct: 547  VLSSCYCSQEA----QVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGD 602

Query: 240  GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             VS+  M++  A N  +KE   LFR +Q       +F  +T L        L +G+ IH 
Sbjct: 603  VVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHA 662

Query: 300  QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                    +++ V N+L++MY+ CG + EA   F  +     V W  M +AY Q G  +E
Sbjct: 663  CVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKE 722

Query: 360  ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            A+ LF +M    +  D+ TF++ L  S   A +S GK  H+    SG  S+V   + L+ 
Sbjct: 723  AVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVK 782

Query: 420  MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            +YAK G L +A+  F+   +  +V  NA+I A AQ+G ++  +K F  M Q G +PD  +
Sbjct: 783  LYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVAT 842

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L+S++SAC H G++EEG   F +M + + + P  EHYA  VD+L R+G  + AE+++ +M
Sbjct: 843  LVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKM 902

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            PFE + ++W+S++ +C++  + E  ++ A ++ +++   ++A +V +SNIY   G+W+  
Sbjct: 903  PFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP-HNSAAHVVLSNIYCATGKWKDA 961

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
               +K M +  V+     SW E+  +VH F A D  HP+T+EI   ++ L   M++ GY+
Sbjct: 962  DVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYE 1021

Query: 660  PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
             D      D ++E+K ++L YHSER+AIAF LI TP  + + ++KNLR C DCH A K I
Sbjct: 1022 ADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYI 1078

Query: 720  SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            S + GREI VRDS RFHHF +G CSC+D W
Sbjct: 1079 SMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 182/706 (25%), Positives = 323/706 (45%), Gaps = 73/706 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+    N LI+ YV+ G+L  A  +F+ M +R  VSWT LI   +Q   F  AF LF  M
Sbjct: 58  QHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTM 117

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY----NSILIICNSLVDSYC 119
             +  + P+  T   +L+ C+          +HA I + G      +  ++ N++++ Y 
Sbjct: 118 LLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYA 177

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKE-GLNEEAIKLFVEMQHLGFKPSDFTFA 178
           K   L+ A  VF  +P+KD VS+ A+   +A+E     +A+++F EM      P+  TF 
Sbjct: 178 KCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFI 237

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-- 236
            AL A   L D   G  +H+ + + +   +   +NAL+++Y K      A  +F  M   
Sbjct: 238 TALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASR 294

Query: 237 -EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL-SVVANKLDLQIG 294
            E+D VS+N MI+      ++ +++ +FR L+      +     T+L ++ A+ +D    
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAA 354

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
           R  H +   +  + +V + N+++ MYAKCG F  A  +F  +      + W  M+ A   
Sbjct: 355 RGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASED 414

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNV 411
           + +  + +N F  M  A I  ++ +F +IL A +   +L  G+++HS ++  R  ++ + 
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEM--PERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            + + L+ MY K GS+ +A   FKEM  P R++V+WN ++ A AQN  ++    +  +M+
Sbjct: 475 VA-TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEML 533

Query: 470 QSGYQPDSVSLLSVLSAC-------------------------------SHCGLIEEGLQ 498
           Q G  PD++S  SVLS+C                                 C  +E+   
Sbjct: 534 QGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARS 593

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSC 555
            FN M     +      + +MV     +  F E   L  +M  E   PD+   ++ +++C
Sbjct: 594 VFNEMDHGDVVS-----WTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
                L   K     + ++    D A   A+ N+Y+  G W       + M+ R +    
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDL---- 704

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
             SW       ++ +A    + Q    +  +  L ++M+ EG KPD
Sbjct: 705 -VSW-------NIMSAA---YAQAGLAKEAVL-LFRQMQLEGVKPD 738



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 153/300 (51%), Gaps = 22/300 (7%)

Query: 269 TRFDRSQ--FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCGR 325
            R DR+     ++ LL    +  DL  G+  H + I    + + + + N L++MY +CG 
Sbjct: 17  VRVDRAADLQEYTALLQSCVDSNDLAKGKHAH-ELIANAGLEQHLFLGNCLINMYVRCGS 75

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA-TFASILR 384
            EEA  IF+ +   + V WTA+ISA  Q G    A  LF  M   + +A  + T  ++L 
Sbjct: 76  LEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLN 135

Query: 385 ASAELASLSLGKQLHSFVIRSGF----MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           A A    L++G+ +H+ +   G      +    G+A+++MYAK GSL+DAI  F  +PE+
Sbjct: 136 ACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEK 195

Query: 441 NIVSWNALISACAQN----GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           ++VSW A+  A AQ      DA   L+ F +M+     P+ ++ ++ L AC+    + +G
Sbjct: 196 DVVSWTAMAGAYAQERRFYPDA---LRIFREMLLQPLAPNVITFITALGACTS---LRDG 249

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF--EPDEIMWSSVINS 554
             + +S+  +  L        +++++  + G ++ A  +   M    E D + W+++I++
Sbjct: 250 -TWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 155/349 (44%), Gaps = 53/349 (15%)

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           +++G++   L       R + +AD   + ++L++  +   L+ GK  H  +  +G   ++
Sbjct: 1   MKRGSIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHL 60

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQ 470
           F G+ L++MY + GSL++A   F +M ERN+VSW ALISA AQ G        F  M ++
Sbjct: 61  FLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLE 120

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRS 526
           S   P+S +L+++L+AC++   +  G +  ++M  +  L            +M+++  + 
Sbjct: 121 SSAAPNSYTLVAMLNACANSRDLAIG-RSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVI-----------NSCRIHKNLEFAKKAAD------ 569
           G  ++A  +   +P E D + W+++            ++ RI + +     A +      
Sbjct: 180 GSLEDAIAVFLAIP-EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFIT 238

Query: 570 QLFKMEKLRDAA--------------PYV--AMSNIYAVAGQWESVSQVKKAMRERGVRK 613
            L     LRD                P    A+ N+Y   G WE    V KAM  R  ++
Sbjct: 239 ALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASR--QE 296

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +   SW  + S     +     H     I R+       ++ EG +P++
Sbjct: 297 LDLVSWNAMISA----SVEAGRHGDAMAIFRR-------LRLEGMRPNS 334


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/666 (34%), Positives = 375/666 (56%), Gaps = 8/666 (1%)

Query: 86  PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV--SFN 143
           P T   L ++HA ++     ++     SL  +Y ++  LD A       P   S   ++N
Sbjct: 25  PTTVAALTRLHALLVVSSSQNLF---PSLAAAYARVGALDAAESTLAASPSSRSCIPAWN 81

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           AL+   ++ G    A+++F  +     +P   TF  AL+A   L D+     V       
Sbjct: 82  ALLAARSRAGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRVRAFAA 140

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            +  +VFV +ALL +YS+   + +A ++F  MP  D V+++ M+  +    +  E+L ++
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
             ++       +     ++       + ++G  +H + +      +V +A SLVDMYAK 
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G F+ A+++F  + + + V W A+IS + Q G+ +EAL+LF EM  + +  D     S L
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A A++  L LGK +H F++R      +  G+A+LDMY+K GSL+ A + F ++  R++V
Sbjct: 321 LACADVGFLKLGKSIHGFILRRLEFQCIL-GTAVLDMYSKCGSLESARKLFNKLSSRDLV 379

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WNA+I+ C  +G     L  F+++ ++G +PD  +  S+LSA SH GL+EEG  +F+ M
Sbjct: 380 LWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             ++ + P ++H   +VD+L RSG  +EA +++A M  EP   +W ++++ C  +K LE 
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLEL 499

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
            +  A ++ + +   D      +SN+YA A +W+ V +++K M++ G +KV  YS +E+ 
Sbjct: 500 GETIAKKILESQP-EDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVH 558

Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
              H F   D+ HPQ  EI + I  L  EM+K GY P T    HD DE++K + L YHSE
Sbjct: 559 GTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSE 618

Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
           RLAIAF L+NT  G+ ++++KNLR C DCH AIK ISKI  REI VRD+ RFHHFKDG C
Sbjct: 619 RLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGAC 678

Query: 744 SCRDFW 749
           SC D+W
Sbjct: 679 SCGDYW 684



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 225/478 (47%), Gaps = 9/478 (1%)

Query: 12  LISGYVKSGNLATARE-LFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           L + Y + G L  A   L  S   R+ + +W  L+   S+      A ++F  + +   +
Sbjct: 50  LAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSS--A 107

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF   L+ C+     +    V       GY   + +C++L+  Y +   +  A R
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  MP+KD V+++ ++ GF   G   EA+ ++  M+  G    +      + A     +
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G  VH   ++     +V +A +L+D+Y+K+     AR++F  MP  + VS+N +I+ 
Sbjct: 228 TRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISG 287

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A N    E+L LFRE+  +          + L   A+   L++G+ IH   I+     +
Sbjct: 288 FAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHG-FILRRLEFQ 346

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             +  +++DMY+KCG  E A+++F  LS    V W AMI+     G   +AL LF E+  
Sbjct: 347 CILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNE 406

Query: 370 ANISADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             I  D ATFAS+L A +    +  GK      +   G          ++D+ A+SG ++
Sbjct: 407 TGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVE 466

Query: 429 DAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           +A +    M  E  I  W AL+S C  N   +      + +++S  QP+ + +L+++S
Sbjct: 467 EANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILES--QPEDIGVLALVS 522



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 4/180 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V    L+  Y K+G+   AR++F  M  R AVSW  LI G++Q     EA  LF +M 
Sbjct: 246 DVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMS 305

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKIRC 123
           T  G  PD     + L  C++         +H  I+ +  +  IL    +++D Y K   
Sbjct: 306 TS-GLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCIL--GTAVLDMYSKCGS 362

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ AR++F ++  +D V +NA+I      G   +A+ LF E+   G KP   TFA+ LSA
Sbjct: 363 LESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSA 422


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/559 (40%), Positives = 346/559 (61%), Gaps = 3/559 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G++VHA ++KT ++  V+++  L+ LY+K +C+  AR +F EM E + VS+  MI+ Y+ 
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                E+L LF ++  +  + ++F F+T+LS        ++GRQIH+        + + V
Sbjct: 89  RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFV 148

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            +SL+DMYAK GR  EA+ +F  L     V  TA+IS Y Q G  EEAL LF  + R  +
Sbjct: 149 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
           S++  T+AS+L A + LA+L  GKQ+HS V+R      V   ++L+DMY+K G+L  A +
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARK 268

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCG 491
            F  MP R ++SWNA++   +++G     +K F+ M +    +PDSV+ L+VLS CSH G
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGG 328

Query: 492 LIEEGLQYFNSMTQKY-KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           L ++GL+ F+ M     ++    EHY  ++D+L R+G  +EA +L+ +MPFEP   +W S
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGS 388

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CR+H N    +    +L ++E   +A  YV +SN+YA AG+WE V  V++ M E+ 
Sbjct: 389 LLGACRVHSNTNIGEFVGCRLLEIEP-ENAGNYVILSNLYASAGRWEDVRNVRELMMEKA 447

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V K    SW+EL   +H F A+D  HP+  E+  K+  L+ + K+ GY PD SC L+D D
Sbjct: 448 VIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVD 507

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K + L  HSE+LA+AF LI+T EG P+ V+KNLR C DCH   K +SK+ GR++++R
Sbjct: 508 EEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIR 567

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D +RFHH   G CSC D+W
Sbjct: 568 DKNRFHHVAGGICSCGDYW 586



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 208/389 (53%), Gaps = 4/389 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  +  LL+ C       E  +VHA +IK  Y   + +   L+  Y K  CL  A
Sbjct: 5   GPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF EM +++ VS+ A+I+G+++ G   EA+ LFV+M     +P++FTFA  LS+  G 
Sbjct: 65  RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           +   LGRQ+H+ + K N+  ++FV ++LLD+Y+K   + EAR +F  +PE D VS   +I
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+L+LF  LQ      +   +++LL+ ++    L  G+Q+H+  +     
Sbjct: 185 SGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELP 244

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V + NSL+DMY+KCG    A++IF N+   + + W AM+  Y + G   E + LF  M
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304

Query: 368 CRAN-ISADQATFASILRASAELASLSLGKQLHSFVIRSG--FMSNVFSGSALLDMYAKS 424
              N +  D  TF ++L   +       G ++   ++  G    + +     ++D+  ++
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G +++A +  K+MP E     W +L+ AC
Sbjct: 365 GRVEEAFELIKKMPFEPTAAIWGSLLGAC 393



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 8/349 (2%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RT 65
           +ST ++I  Y K   L  AR +F+ M +R  VSWT +I GYSQ+    EA  LFV M R+
Sbjct: 47  LSTRLIIL-YTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRS 105

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D  ++P+  TFAT+LS C+         Q+H+ I K  Y + + + +SL+D Y K   + 
Sbjct: 106 D--TEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIH 163

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR VF+ +P++D VS  A+I+G+A+ GL+EEA++LF  +Q  G   +  T+A+ L+A  
Sbjct: 164 EARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALS 223

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GLA +  G+QVH+ V++      V + N+L+D+YSK   +  ARK+F  MP    +S+N 
Sbjct: 224 GLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNA 283

Query: 246 MITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           M+  Y+ + +  E +KLF+ + +  +       F  +LS  ++      G ++  + +  
Sbjct: 284 MLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNG 343

Query: 305 TAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
               E  + +   ++D+  + GR EEA E+   +    T   W +++ A
Sbjct: 344 GDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 164/302 (54%), Gaps = 16/302 (5%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           ++ LL+   NK  ++ G+++H   I T  +  V ++  L+ +Y KC     A+ +F  + 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + V WTAMIS Y Q+G   EAL+LF++M R++   ++ TFA++L +    +   LG+Q
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +HS + +  + +++F GS+LLDMYAK+G + +A   F+ +PER++VS  A+IS  AQ G 
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F  + + G   + V+  S+L+A S    ++ G Q        + LR +   Y 
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ-----VHSHVLRCELPFYV 247

Query: 518 ----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH-KNLEFAKKAADQLF 572
               S++D+  + G  + A K+   MP     I W++++     H K +E  K     LF
Sbjct: 248 VLQNSLIDMYSKCGNLNYARKIFNNMPVRT-VISWNAMLVGYSKHGKGIEVVK-----LF 301

Query: 573 KM 574
           K+
Sbjct: 302 KL 303


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/639 (37%), Positives = 379/639 (59%), Gaps = 16/639 (2%)

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           ++  Y +   L  A  +F EMP +D VS+N++I+G  + G    A+KLF EM     + S
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP----ERS 127

Query: 174 DFTFAAALSAGV--GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
             ++ A ++     G  D A  R  +   VK     +    N+++  Y +   V +A KL
Sbjct: 128 VVSWTAMVNGCFRSGKVDQA-ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKL 181

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +MP  + +S+  MI     NE+  E+L LF+ +       +  PF+ +++  AN    
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            +G Q+H   I    + E  V+ SL+  YA C R  +++++F    H     WTA++S Y
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
                 E+AL++F  M R +I  +Q+TFAS L + + L +L  GK++H   ++ G  ++ 
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F G++L+ MY+ SG++ DA+  F ++ +++IVSWN++I  CAQ+G  +     F  M++ 
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK-LRPKKEHYASMVDILCRSGCFD 530
             +PD ++   +LSACSHCG +E+G + F  M+     +  K +HY  MVDIL R G   
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLK 481

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EAE+L+ +M  +P+E++W +++++CR+H +++  +KAA  +F ++  + +A YV +SNIY
Sbjct: 482 EAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS-KSSAAYVLLSNIY 540

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           A AG+W +VS+++  M++ G+ K    SWV ++ K H F + D+  P  + I  K+E L 
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLR 598

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           +++K+ GY PD   ALHD ++E K E L YHSERLAIAF LINT EGS + VMKNLR C 
Sbjct: 599 EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCE 658

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH  IKLIS + GREI +RD  RFHHFK+G CSC D+W
Sbjct: 659 DCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 216/461 (46%), Gaps = 45/461 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +ISG V+ G++ TA +LF+ M +R+ VSWT ++ G  +  +  +A +LF
Sbjct: 92  MPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF 151

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M                       DTA                      NS+V  Y +
Sbjct: 152 YQMPV--------------------KDTA--------------------AWNSMVHGYLQ 171

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D A ++FK+MP K+ +S+  +I G  +   + EA+ LF  M     K +   F   
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A        +G QVH  ++K  F+   +V+ +L+  Y+    + ++RK+F E      
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
             +  +++ Y+ N++++++L +F  +       +Q  F++ L+  +    L  G+++H  
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +     ++  V NSLV MY+  G   +A  +F  +   S V W ++I    Q G  + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM---SNVFSGSAL 417
             +F +M R N   D+ TF  +L A +    L  G++L  + + SG       +   + +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCM 470

Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
           +D+  + G LK+A +  + M  + N + W AL+SAC  + D
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 182/428 (42%), Gaps = 39/428 (9%)

Query: 187 LADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           ++ +  G+   +F V   F    V + N LL        + EAR++F ++P      Y  
Sbjct: 17  ISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRR-----IDEAREVFNQVPSPHVSLYTK 71

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG---------RQ 296
           MIT Y  + +  ++L LF E+      R    +++++S      D+            R 
Sbjct: 72  MITGYTRSNRLVDALNLFDEMPV----RDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127

Query: 297 IHTQTIVTTA------------------ISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           + + T +                     + +    NS+V  Y + G+ ++A ++F  +  
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + + WT MI    Q     EAL+LF  M R  I +    F  ++ A A   +  +G Q+
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  +I+ GF+   +  ++L+  YA    + D+ + F E     +  W AL+S  + N   
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L  F  M+++   P+  +  S L++CS  G ++ G +  + +  K  L        S
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNS 366

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           +V +   SG  ++A  +  ++ F+   + W+S+I  C  H   ++A     Q+ ++ K  
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425

Query: 579 DAAPYVAM 586
           D   +  +
Sbjct: 426 DEITFTGL 433


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 376/662 (56%), Gaps = 71/662 (10%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+   FA LL  C    +A     VHA I+   ++  + I N L+D Y K  CLD AR++
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 131 FKEMPQK-------------------------------DSVSFNALITGFAKEGLNEEAI 159
           F  MPQ+                               D  S+N++++GFA+    EE++
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           + FV+M    F  ++++F +ALSA  GL D+ +G QVHA V K+ +  +V++ +AL+D+Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   V  A ++F  M E + V++N +ITCY  N    E+L++F  +  +  +  +   +
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEI------ 332
           +++S  A+   L+ G QIH + + T     ++ + N+LVDMYAKC +  EA+ +      
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 333 -------------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
                                    F+ ++  + V W A+I+ Y Q G  EEAL LF  +
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF------MSNVFSGSALLDMY 421
            R +I     TF ++L A A LA L LG+Q H+ V++ GF       S++F G++L+DMY
Sbjct: 373 KRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMY 432

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K GS++D  + F++M ER+ VSWNA+I   AQNG     L+ F  M+  G +PD V+++
Sbjct: 433 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 492

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
            VL ACSH GL+EEG  YF SM +++ L P K+HY  MVD+L R+GC +EA+ L+  MP 
Sbjct: 493 GVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPV 551

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            PD ++W S++ +C++H N+E  K AA++L +++   ++ PYV +SN+YA  G+W  V +
Sbjct: 552 NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPW-NSGPYVLLSNMYAELGRWGDVVR 610

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+K MR++GV K    SW+E++S+VHVF   D+ HP   +I   ++ L ++MK+ GY PD
Sbjct: 611 VRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670

Query: 662 TS 663
            +
Sbjct: 671 AN 672



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 256/509 (50%), Gaps = 40/509 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT + N LIS   KSG L  A  LF SM +    SW  ++ G++Q ++F E+ + F
Sbjct: 76  MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M  +     +Y +F + LS C+     N   QVHA + K  Y++ + + ++L+D Y K
Sbjct: 136 VKMHREDFLLNEY-SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A  VF  M +++ V++N+LIT + + G   EA+++FV M   G +P + T A+ 
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARK--------- 230
           +SA   L  +  G Q+HA VVKTN F +++ + NAL+D+Y+K   V EAR+         
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 231 ----------------------LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                 +F +M + + VS+N +I  Y  N + +E+L+LFR L+ 
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F  LLS  AN  DL +GRQ HT  +       + A S++ V NSL+DMY K
Sbjct: 375 ESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMK 434

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E+   +F  +     V W A+I  Y Q G   EAL +F +M       D  T   +
Sbjct: 435 CGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGV 494

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERN 441
           L A +    +  G+     +   G +      + ++D+  ++G L +A    + MP   +
Sbjct: 495 LCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPD 554

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQ 470
            V W +L++AC  +G+ +    + E +++
Sbjct: 555 AVVWGSLLAACKVHGNIEMGKHAAEKLLE 583



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 225/451 (49%), Gaps = 69/451 (15%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
           + P+   FA  L + +        R VHA ++ T F   +F+ N L+D+Y K DC+ +AR
Sbjct: 11  YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDAR 70

Query: 230 KLF-------------------------------GEMPEVDGVSYNVMITCYAWNEQYKE 258
           KLF                               G MPE D  S+N M++ +A +++++E
Sbjct: 71  KLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEE 130

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           SL+ F ++    F  +++ F + LS  A  +DL +G Q+H     +   ++V + ++L+D
Sbjct: 131 SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALID 190

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY+KCG    A+E+F+ +   + V W ++I+ Y Q G   EAL +F+ M  + +  D+ T
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250

Query: 379 FASILRASAELASLSLGKQLHSFVIRSG-FMSNVFSGSALLDMYAK-------------- 423
            AS++ A A L +L  G Q+H+ V+++  F  ++  G+AL+DMYAK              
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310

Query: 424 -----------------SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
                            + S+K A   F +M +RN+VSWNALI+   QNG+ +  L+ F 
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-YFNSMTQKYKLRPKKEH----YASMVD 521
            + +    P   +  ++LSAC++   +  G Q + + + Q ++ +   E       S++D
Sbjct: 371 LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLID 430

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +  + G  ++  ++  +M  E D + W+++I
Sbjct: 431 MYMKCGSIEDGSRVFEKMK-ERDCVSWNAII 460


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/762 (32%), Positives = 421/762 (55%), Gaps = 36/762 (4%)

Query: 21  NLATARELF-NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           +L+ A+E+F NS    T   +  LI GY+      EA  LF+ M   G S PD  TF   
Sbjct: 82  SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFG 140

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           LS C++       IQ+H  I+K GY   L + NSLV  Y +   LD AR+VF EM +++ 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           VS+ ++I G+A+    ++A+ LF  M +     P+  T    +SA   L D+  G +V+A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F+  +    N  + +AL+D+Y K + +  A++LF E    +    N M + Y      +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L +F  +  +     +    + +S  +   ++  G+  H   +     S   + N+L+D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL--------------------- 357
           MY KC R + A  IF  +S+ + V W ++++ YV+ G +                     
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440

Query: 358 ----------EEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
                     EEA+ +F  M  +  ++AD  T  SI  A   L +L L K ++ ++ ++G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              +V  G+ L+DM+++ G  + A+  F  +  R++ +W A I A A  G+A+  ++ F+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           DM++ G +PD V+ +  L+ACSH GL+++G + F SM + + + P+  HY  MVD+L R+
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  +EA +L+  MP EP++++W+S++ +CR+  N+E A  AA+++  +   R  + YV +
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS-YVLL 679

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           SN+YA AG+W  +++V+ +M+E+G+RK    S ++++ K H FT+ DE HP+   I   +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           + + Q     G+ PD S  L D DE+ K+  L  HSE+LA+A+ LI++ +G+ I ++KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           R C+DCH+  K  SK+  REI +RD++RFH+ + G CSC DF
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 234/484 (48%), Gaps = 34/484 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y + G L +AR++F+ M +R  VSWT +I GY++++  ++A  LF  M  D   
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT   ++S C++ +      +V+A I   G     ++ ++LVD Y K   +D+A+R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E    +    NA+ + + ++GL  EA+ +F  M   G +P   +  +A+S+   L +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---------------------------- 221
           I  G+  H +V++  F     + NAL+D+Y K                            
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412

Query: 222 ---HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFP 277
              +  V  A + F  MPE + VS+N +I+       ++E++++F  +Q     +     
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
             ++ S   +   L + + I+          +V++  +LVDM+++CG  E A  IF +L+
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           +     WTA I A    GN E A+ LF +M    +  D   F   L A +    +  GK+
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKE 592

Query: 398 L-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQN 455
           + +S +   G          ++D+  ++G L++A+Q  ++MP E N V WN+L++AC   
Sbjct: 593 IFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652

Query: 456 GDAQ 459
           G+ +
Sbjct: 653 GNVE 656



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 4/250 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+  V+ N +++GYV++G +  A E F +M ++  VSW  +I G  Q + F EA ++F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M++  G + D VT  ++ S C      +    ++  I K G    + +  +LVD + +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               + A  +F  +  +D  ++ A I   A  G  E AI+LF +M   G KP    F  A
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFV--ENVFVANALLDLYSKHDCVVEARKLFGEMP-E 237
           L+A      +  G+++   ++K + V  E+V     ++DL  +   + EA +L  +MP E
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPME 636

Query: 238 VDGVSYNVMI 247
            + V +N ++
Sbjct: 637 PNDVIWNSLL 646



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL--KDAIQTFKEMPERN-----IVSWNAL 448
           K  H  + + G  ++V   S +  + A+S  L  ++++   KE+ E +        +N+L
Sbjct: 49  KMFHRSLTKQGLDNDV---STITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I   A +G     +  F  M+ SG  PD  +    LSAC+       G+Q    +    K
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV---K 162

Query: 509 LRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           +   K+ +   S+V      G  D A K+  +M  E + + W+S+I     +   +FAK 
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAKD 218

Query: 567 AADQLFKMEKLRDAAP-YVAMSNIYAVAGQWESVSQVKKA---MRERGV 611
           A D  F+M +  +  P  V M  + +   + E +   +K    +R  G+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 417/761 (54%), Gaps = 23/761 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT--AVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
            N L++ Y + G LA A E+F S+ D    AVS+  LI       ++ +     +     
Sbjct: 99  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW-DHALAALRAMLA 157

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQV----HADIIKFG--YNSILIICNSLVDSYCK 120
           GG      T  ++L   S    A   +++    HA  +K G  +       N+L+  Y +
Sbjct: 158 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 217

Query: 121 IRCLDLARRVFK-EMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           +  +  A+R+F    P + D V++N +++   + G+ +EA++   +M  LG +P   TFA
Sbjct: 218 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 277

Query: 179 AALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +AL A   L  + +GR++HA+V+K +    N FVA+AL+D+Y+ H+ V +AR++F  +P+
Sbjct: 278 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 337

Query: 238 VD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQI 293
                G+ +N MI  YA     +E+L+LF  ++    F   +   +++L   A       
Sbjct: 338 SGKQLGM-WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAG 396

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +         V N+L+DMYA+ G+ + A+ IFA +     V W  +I+  V 
Sbjct: 397 KEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 456

Query: 354 KGNLEEALNLFIEMCR---ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           +G++ +A  L  EM +     +  +  T  ++L   A LA+ + GK++H + +R    ++
Sbjct: 457 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTD 516

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  GSAL+DMYAK G L  +   F  +P RN ++WN LI A   +G        F+ M  
Sbjct: 517 VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTA 576

Query: 471 SG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           SG  +P+ V+ ++ L+ACSH G+++ GLQ F++M + + + P  +  A +VDIL R+G  
Sbjct: 577 SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 636

Query: 530 DEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
           DEA  ++  M     ++  WS+++ +CR+H+N+   + A ++L ++E   +A+ YV + N
Sbjct: 637 DEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE-EASHYVLLCN 695

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           IY+ AGQW   ++V+  MR RGV K    SW+E+   +H F A +  HP + E+   +E 
Sbjct: 696 IYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEA 755

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           L  EM   GY PDTSC LHD D+  K   L+ HSE+LAIAF L+    G+ I V KNLR 
Sbjct: 756 LWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRV 815

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH A K +SK+ GREI +RD  RFHHF++G CSC D+W
Sbjct: 816 CNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 18/413 (4%)

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ +   L D    R +HA  ++   +   +  VANALL  Y++   +  A ++FG + +
Sbjct: 65  AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 124

Query: 238 V--DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV----ANKLDL 291
              D VS+N +I+      ++  +L   R +       + F   ++L  V    A    +
Sbjct: 125 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 184

Query: 292 QIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEIFANLS--HISTVPWTAM 347
           ++GR+ H   +    +   +    N+L+ MYA+ G   +A+ +FA  +      V W  M
Sbjct: 185 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 244

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG- 406
           +S  VQ G  +EA+    +M    +  D  TFAS L A + L  L +G+++H++VI+   
Sbjct: 245 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 304

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKS 464
             +N F  SAL+DMYA    +  A Q F  +P+  + +  WNA+I   AQ G  +  L+ 
Sbjct: 305 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 364

Query: 465 FEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
           F  M  ++G+ P   ++ SVL AC+       G +  +    K  +   +    +++D+ 
Sbjct: 365 FARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDMY 423

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            R G  D A ++ A +   PD + W+++I  C +  ++  A + A ++ ++E+
Sbjct: 424 ARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 475



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 5/183 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDM 63
           N    N L+  Y + G    AR +F +MVD    VSW  LI G   +    +AF+L  +M
Sbjct: 412 NRFVQNALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM 470

Query: 64  RT--DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +   +GG  P+ +T  TLL GC+         ++H   ++   ++ + + ++LVD Y K 
Sbjct: 471 QQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC 530

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
            CL L+R VF  +P+++++++N LI  +   GL  EA  LF  M   G  +P++ TF AA
Sbjct: 531 GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAA 590

Query: 181 LSA 183
           L+A
Sbjct: 591 LAA 593


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/667 (35%), Positives = 393/667 (58%), Gaps = 4/667 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI  Y K+GN+  AR +F+ + ++TAV+WT +I GY++  +   + +LF  
Sbjct: 161 DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 220

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR +    PD    +++LS CS  +      Q+HA +++ G    + + N L+D Y K  
Sbjct: 221 MR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 279

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +   R++F +M  K+ +S+  +I+G+ +   + EA+KLF EM  LG+KP  F   + L+
Sbjct: 280 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 339

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +      +  GRQVHA+ +K N   + FV N L+D+Y+K + +++A+K+F  M E + +S
Sbjct: 340 SCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 399

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           YN MI  Y+  E+  E+L+LF E++   F  S   F +LL V A+   L++ +QIH   I
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                 ++   ++L+D+Y+KC   ++A+ +F  ++    V W AM   Y Q    EEAL 
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L+  +  +    ++ TFA+++ A++ LASL  G+Q H+ +++ G     F  +AL+DMYA
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GS+++A + F     R++V WN++IS  AQ+G+A+  L  F +M++ G QP+ V+ ++
Sbjct: 580 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 639

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH G +E+GL +FNSM   + ++P  EHYA +V +L RSG   EA++ + +MP E
Sbjct: 640 VLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIE 698

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P  I+W S++++CRI  N+E  K AA+     +  +D+  Y+ +SNI+A  G W  V +V
Sbjct: 699 PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDP-KDSGSYILLSNIFASKGMWADVKKV 757

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M    V K    SW+E+ +KV+VF A D  H +  +I   ++ L+Q +K  GY PD 
Sbjct: 758 RDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA-DIGSVLDILIQHIKGAGYVPDA 816

Query: 663 SCALHDE 669
           +  L ++
Sbjct: 817 TALLMND 823



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 323/613 (52%), Gaps = 2/613 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N+LI+   KS  +  AR +F+ M  +  ++W+ ++  YSQ+    EA  +FVD++
Sbjct: 61  DTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ 120

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+    A+++  C++     +  Q+H  +++ G++  + +  SL+D Y K   +
Sbjct: 121 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 180

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR VF ++ +K +V++  +I G+ K G +  +++LF +M+     P  +  ++ LSA 
Sbjct: 181 EEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC 240

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  +  G+Q+HA+V++     +V V N L+D Y+K + V   RKLF +M   + +S+ 
Sbjct: 241 SMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWT 300

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ Y  N    E++KLF E+    +    F  +++L+   ++  L+ GRQ+H  TI  
Sbjct: 301 TMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKA 360

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S+  V N L+DMYAK     +AK++F  ++  + + + AMI  Y  +  L EAL LF
Sbjct: 361 NLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELF 420

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM          TF S+L  SA L +L L KQ+H  +I+ G   ++F+GSAL+D+Y+K 
Sbjct: 421 HEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKC 480

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
             +KDA   F+EM E++IV WNA+     Q+ + +  LK +  +  S  +P+  +  +++
Sbjct: 481 SYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALI 540

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +A S+   +  G Q+ N +  K  L        ++VD+  + G  +EA K+     +  D
Sbjct: 541 TAASNLASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWR-D 598

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            + W+S+I++   H   E A     ++ K     +   +VA+ +  + AG+ E       
Sbjct: 599 VVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFN 658

Query: 605 AMRERGVRKVTAY 617
           +M   G++  T +
Sbjct: 659 SMPGFGIKPGTEH 671



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 170/641 (26%), Positives = 299/641 (46%), Gaps = 82/641 (12%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P    FA LL      +       +H  II  G  S   + N L++   K   +D AR V
Sbjct: 25  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLAD 189
           F +MP K+ ++++++++ ++++G +EEA+ +FV++Q   G  P++F  A+ + A   L  
Sbjct: 85  FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 144

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G Q+H FVV++ F ++V+V  +L+D YSK+  + EAR +F ++ E   V++  +I  
Sbjct: 145 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 204

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y    +   SL+LF +++ T     ++  S++LS  +    L+ G+QIH   +      +
Sbjct: 205 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 264

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N L+D Y KC R +  +++F  +   + + WT MIS Y+Q     EA+ LF EM R
Sbjct: 265 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 324

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                D     S+L +     +L  G+Q+H++ I++   S+ F  + L+DMYAKS  L D
Sbjct: 325 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 384

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-- 487
           A + F  M E+N++S+NA+I   +        L+ F +M    + P  ++ +S+L     
Sbjct: 385 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSAS 444

Query: 488 ---------------------------------SHCGLIEEGLQYFNSMTQKYKLRPKKE 514
                                            S C  +++    F  M +K        
Sbjct: 445 LFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-------- 496

Query: 515 HYASMVDILCRSGCF---------DEAEKLMAQMPF---EPDEIMWSSVINSCRIHKNLE 562
                 DI+  +  F         +EA KL + + F   +P+E  ++++I +     +L 
Sbjct: 497 ------DIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLR 550

Query: 563 FAKKAADQLFKMEKLRDAAPYV--AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
             ++  +QL KM    D  P+V  A+ ++YA  G   S+ + +K       R V    W 
Sbjct: 551 HGQQFHNQLVKMG--LDFCPFVTNALVDMYAKCG---SIEEARKMFNSSIWRDVVC--WN 603

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
            + S           H Q  E    +  + +EM KEG +P+
Sbjct: 604 SMIST----------HAQHGEAEEAL-GMFREMMKEGIQPN 633



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           +Q    +P    FA  L   +    I   + +H  ++ +    + F+AN L+++ SK D 
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLS 283
           V  AR +F +MP  + ++++ M++ Y+     +E+L +F +LQ    +  ++F  ++++ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
                  ++ G Q+H   + +    +V V  SL+D Y+K G  EEA+ +F  LS  + V 
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 197

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WT +I+ Y + G    +L LF +M   N+  D+   +S+L A + L  L  GKQ+H++V+
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           R G   +V   + L+D Y K   +K   + F +M  +NI+SW  +IS   QN      +K
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 317

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F +M + G++PD  +  SVL++C     +E+G Q  ++ T K  L   +     ++D+ 
Sbjct: 318 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ-VHAYTIKANLESDEFVKNGLIDMY 376

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            +S    +A+K+   M  E + I ++++I      + L      A +LF   ++R   P
Sbjct: 377 AKSNLLIDAKKVFDVMA-EQNVISYNAMIEGYSSQEKL----SEALELFHEMRVRLFPP 430


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/721 (34%), Positives = 392/721 (54%), Gaps = 7/721 (0%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDM---RTDGGSDPDYVTFATLLSGCSEPDTANE 91
           R  VSW  +I  +S      E+F L  +M     DG   PD  T  T+L  C+       
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              VH   +K   +  L++ N+L+D Y K  C+  A+ +FK    K+ VS+N ++ GF+ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 152 EGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           EG       +  +M   G   K  + T   A+      + +   +++H + +K  FV N 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            VANA +  Y+K   +  A+++F  +      S+N +I  +A +   + SL    +++ +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F   +LLS  +    L++G+++H   I      ++ V  S++ +Y  CG     
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           + +F  +   S V W  +I+ Y+Q G  + AL +F +M    I     +   +  A + L
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 360

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            SL LG++ H++ ++     + F   +L+DMYAK+GS+  + + F  + E++  SWNA+I
Sbjct: 361 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 420

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
                +G A+  +K FE+M ++G+ PD ++ L VL+AC+H GLI EGL+Y + M   + L
Sbjct: 421 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 480

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMA-QMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           +P  +HYA ++D+L R+G  D+A +++A +M  E D  +W S+++SCRIH+NLE  +K A
Sbjct: 481 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 540

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            +LF++E       YV +SN+YA  G+WE V +V++ M E  +RK    SW+EL  KV  
Sbjct: 541 AKLFELEP-EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFS 599

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   +       EI+     L  ++ K GY+PDT    HD  EE K+E L+ HSE+LA+ 
Sbjct: 600 FVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALT 659

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           + LI T EG+ I V KNLR C DCH A KLISK+  REI VRD+ RFHHFK+G CSC D+
Sbjct: 660 YGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 719

Query: 749 W 749
           W
Sbjct: 720 W 720



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 211/457 (46%), Gaps = 10/457 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++  V  N L+  Y K G +  A+ +F    ++  VSW  ++GG+S +      F +   
Sbjct: 74  DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 133

Query: 63  MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
           M   GG D   D VT    +  C        L ++H   +K  F YN   ++ N+ V SY
Sbjct: 134 MLA-GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--LVANAFVASY 190

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   L  A+RVF  +  K   S+NALI G A+      ++   ++M+  G  P  FT  
Sbjct: 191 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 250

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + LSA   L  + LG++VH F+++     ++FV  ++L LY     +   + LF  M + 
Sbjct: 251 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 310

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             VS+N +IT Y  N     +L +FR++              +    +    L++GR+ H
Sbjct: 311 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 370

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +      +  +A SL+DMYAK G   ++ ++F  L   ST  W AMI  Y   G  +
Sbjct: 371 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 430

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
           EA+ LF EM R   + D  TF  +L A      +  G + L       G   N+   + +
Sbjct: 431 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 490

Query: 418 LDMYAKSGSLKDAIQTF-KEMPERNIVS-WNALISAC 452
           +DM  ++G L  A++   +EM E   V  W +L+S+C
Sbjct: 491 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 527



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 8/359 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N  ++ Y K G+L+ A+ +F+ +  +T  SW  LIGG++Q N  R +    + M+
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD  T  +LLS CS+  +     +VH  II+      L +  S++  Y  I C 
Sbjct: 239 IS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY--IHCG 295

Query: 125 DL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           +L   + +F  M  K  VS+N +ITG+ + G  + A+ +F +M   G +    +      
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  + LGR+ HA+ +K    ++ F+A +L+D+Y+K+  + ++ K+F  + E    S
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI  Y  +   KE++KLF E+Q T  +     F  +L+   +   +  G +   Q  
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVP-WTAMISAYVQKGNLE 358
            +  +   +K    ++DM  + G+ ++A  + A  +S  + V  W +++S+     NLE
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 534



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 37/228 (16%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K+G++  + ++FN + +++  SW  +I GY      +EA KLF +M+   G +P
Sbjct: 388 LIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT-GHNP 446

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIRCLDLARR 129
           D +TF  +L+ C+     +E ++ + D +K  FG    L     ++D   +   LD A R
Sbjct: 447 DDLTFLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 505

Query: 130 VF-KEMPQKDSVSFNALITGFAKEGLNEE-----AIKLF-VEMQHLGFKPSDFTFAAALS 182
           V  +EM ++  V     +    +   N E     A KLF +E +    KP ++   + L 
Sbjct: 506 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE----KPENYVLLSNLY 561

Query: 183 AGVGLAD----------------------IALGRQVHAFVVKTNFVEN 208
           AG+G  +                      I L R+V +FVV   F++ 
Sbjct: 562 AGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDG 609


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/600 (37%), Positives = 343/600 (57%), Gaps = 3/600 (0%)

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G    A+++F  +     +P   TF  ALSA   L D+  G  V        + ++V
Sbjct: 85  SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV ++LL LY++   + +A K+F  MP  D V+++ M+  +    Q  ++++++R ++  
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                +     ++       ++++G  +H   +      +V  A SLVDMYAK G  + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  + H + V W+AMIS + Q G  +EAL LF  M  + I  D     S L A + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             L LG+ +H F++R  F  N   G+A +DMY+K GSL  A   F  + +R+++ WNA+I
Sbjct: 324 GFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           + C  +G  Q  L  F++M ++G +PD  +  S+LSA SH GL+EEG  +F  M   +K+
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P ++HY  +VD+L RSG  +EA  L+  M  EP   +W ++++ C  +K LE  +  AD
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            + +++   D      +SN+YA   +W+ V QV+K M++ G +K+   S +E++   HVF
Sbjct: 503 NILELQP-DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D+ HPQ  EI  K+  L  EM+K GY P T    HD +EE+K + L YHSERLAIAF
Sbjct: 562 VMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAF 621

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L+NT  G+ ++++KNLR C DCH AIK ISKI  REI VRD+ RFHHFKDG CSCRD+W
Sbjct: 622 GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 178/353 (50%), Gaps = 12/353 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y + G +  A ++F  M  R  V+W+ ++ G+    Q  +A +++  MR DG    
Sbjct: 149 LLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKG 207

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V    ++  C+          VH  +++ G    ++   SLVD Y K   LD+A RVF
Sbjct: 208 DEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF 267

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  ++ VS++A+I+GFA+ G ++EA++LF  MQ  G +P      +AL A   +  + 
Sbjct: 268 GLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR VH F+V+  F  N  +  A +D+YSK   +  A+ LF  + + D + +N MI C  
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-----KLDLQIGRQIHTQTIVTTA 306
            + + +++L LF+E+  T        F++LLS +++     +  L  GR ++   I    
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAE 446

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
              V     LVD+ A+ G  EEA ++  ++    TV  W A++S  +    LE
Sbjct: 447 KHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 13/237 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K+G L  A  +F  MV R  VSW+ +I G++Q  Q  EA +LF +M+
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKIRC 123
              G  PD     + L  CS          VH  I+ +F +N IL    + +D Y K   
Sbjct: 303 AS-GIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCIL--GTAAIDMYSKCGS 359

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A+ +F  +  +D + +NA+I      G  ++A+ LF EM   G +P   TFA+ LSA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419

Query: 184 --GVGLAD---IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               GL +   +  GR V+ F  K    E  +V   L+DL ++   V EA  L   M
Sbjct: 420 LSHSGLVEEGKLWFGRMVNHF--KITPAEKHYV--CLVDLLARSGLVEEASDLLTSM 472


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 417/761 (54%), Gaps = 23/761 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT--AVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
            N L++ Y + G LA A E+F S+ D    AVS+  LI       ++ +     +     
Sbjct: 97  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW-DHALAALRAMLA 155

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQV----HADIIKFG--YNSILIICNSLVDSYCK 120
           GG      T  ++L   S    A   +++    HA  +K G  +       N+L+  Y +
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 121 IRCLDLARRVFK-EMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           +  +  A+R+F    P + D V++N +++   + G+ +EA++   +M  LG +P   TFA
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 179 AALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +AL A   L  + +GR++HA+V+K +    N FVA+AL+D+Y+ H+ V +AR++F  +P+
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 238 VD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQI 293
                G+ +N MI  YA     +E+L+LF  ++    F   +   +++L   A       
Sbjct: 336 SGKQLGM-WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAG 394

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +         V N+L+DMYA+ G+ + A+ IFA +     V W  +I+  V 
Sbjct: 395 KEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 454

Query: 354 KGNLEEALNLFIEMCR---ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           +G++ +A  L  EM +     +  +  T  ++L   A LA+ + GK++H + +R    ++
Sbjct: 455 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTD 514

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  GSAL+DMYAK G L  +   F  +P RN ++WN LI A   +G        F+ M  
Sbjct: 515 VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTA 574

Query: 471 SG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           SG  +P+ V+ ++ L+ACSH G+++ GLQ F++M + + + P  +  A +VDIL R+G  
Sbjct: 575 SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 634

Query: 530 DEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
           DEA  ++  M     ++  WS+++ +CR+H+N+   + A ++L ++E   +A+ YV + N
Sbjct: 635 DEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE-EASHYVLLCN 693

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           IY+ AGQW   ++V+  MR RGV K    SW+E+   +H F A +  HP + E+   +E 
Sbjct: 694 IYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEA 753

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           L  EM   GY PDTSC LHD D+  K   L+ HSE+LAIAF L+    G+ I V KNLR 
Sbjct: 754 LWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRV 813

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH A K +SK+ GREI +RD  RFHHF++G CSC D+W
Sbjct: 814 CNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 18/413 (4%)

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ +   L D    R +HA  ++   +   +  VANALL  Y++   +  A ++FG + +
Sbjct: 63  AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122

Query: 238 V--DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV----ANKLDL 291
              D VS+N +I+      ++  +L   R +       + F   ++L  V    A    +
Sbjct: 123 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 182

Query: 292 QIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEIFANLS--HISTVPWTAM 347
           ++GR+ H   +    +   +    N+L+ MYA+ G   +A+ +FA  +      V W  M
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG- 406
           +S  VQ G  +EA+    +M    +  D  TFAS L A + L  L +G+++H++VI+   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKS 464
             +N F  SAL+DMYA    +  A Q F  +P+  + +  WNA+I   AQ G  +  L+ 
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362

Query: 465 FEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
           F  M  ++G+ P   ++ SVL AC+       G +  +    K  +   +    +++D+ 
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDMY 421

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            R G  D A ++ A +   PD + W+++I  C +  ++  A + A ++ ++E+
Sbjct: 422 ARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 473



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 5/183 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDM 63
           N    N L+  Y + G    AR +F +MVD    VSW  LI G   +    +AF+L  +M
Sbjct: 410 NRFVQNALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM 468

Query: 64  RT--DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +   +GG  P+ +T  TLL GC+         ++H   ++   ++ + + ++LVD Y K 
Sbjct: 469 QQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC 528

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
            CL L+R VF  +P+++++++N LI  +   GL  EA  LF  M   G  +P++ TF AA
Sbjct: 529 GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAA 588

Query: 181 LSA 183
           L+A
Sbjct: 589 LAA 591


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/761 (33%), Positives = 417/761 (54%), Gaps = 23/761 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRT--AVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
            N L++ Y + G LA A E+F S+ D    AVS+  LI       ++ +     +     
Sbjct: 97  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW-DHALAALRAMLA 155

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQV----HADIIKFG--YNSILIICNSLVDSYCK 120
           GG      T  ++L   S    A   +++    HA  +K G  +       N+L+  Y +
Sbjct: 156 GGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 121 IRCLDLARRVFK-EMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
           +  +  A+R+F    P + D V++N +++   + G+ +EA++   +M  LG +P   TFA
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 179 AALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           +AL A   L  + +GR++HA+V+K +    N FVA+AL+D+Y+ H+ V +AR++F  +P+
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 238 VD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQI 293
                G+ +N MI  YA     +E+L+LF  ++    F   +   +++L   A       
Sbjct: 336 SGKQLGM-WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAG 394

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              +H   +         V N+L+DMYA+ G+ + A+ IFA +     V W  +I+  V 
Sbjct: 395 KEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVV 454

Query: 354 KGNLEEALNLFIEMCR---ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           +G++ +A  L  EM +     +  +  T  ++L   A LA+ + GK++H + +R    ++
Sbjct: 455 QGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTD 514

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V  GSAL+DMYAK G L  +   F  +P RN ++WN LI A   +G        F+ M  
Sbjct: 515 VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTA 574

Query: 471 SG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           SG  +P+ V+ ++ L+ACSH G+++ GLQ F++M + + + P  +  A +VDIL R+G  
Sbjct: 575 SGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRL 634

Query: 530 DEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
           DEA  ++  M     ++  WS+++ +CR+H+N+   + A ++L ++E   +A+ YV + N
Sbjct: 635 DEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPE-EASHYVLLCN 693

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           IY+ AGQW   ++V+  MR RGV K    SW+E+   +H F A +  HP + E+   +E 
Sbjct: 694 IYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEA 753

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           L  EM   GY PDTSC LHD D+  K   L+ HSE+LAIAF L+    G+ I V KNLR 
Sbjct: 754 LWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRV 813

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH A K +SK+ GREI +RD  RFHHF++G CSC D+W
Sbjct: 814 CNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 18/413 (4%)

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A+ +   L D    R +HA  ++   +   +  VANALL  Y++   +  A ++FG + +
Sbjct: 63  AIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISD 122

Query: 238 V--DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV----ANKLDL 291
              D VS+N +I+      ++  +L   R +       + F   ++L  V    A    +
Sbjct: 123 SAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAV 182

Query: 292 QIGRQIHTQTIVTTAISEVK--VANSLVDMYAKCGRFEEAKEIFANLS--HISTVPWTAM 347
           ++GR+ H   +    +   +    N+L+ MYA+ G   +A+ +FA  +      V W  M
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG- 406
           +S  VQ G  +EA+    +M    +  D  TFAS L A + L  L +G+++H++VI+   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKS 464
             +N F  SAL+DMYA    +  A Q F  +P+  + +  WNA+I   AQ G  +  L+ 
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362

Query: 465 FEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
           F  M  ++G+ P   ++ SVL AC+       G +  +    K  +   +    +++D+ 
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHGYVVKRGMAGNRFVQNALMDMY 421

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            R G  D A ++ A +   PD + W+++I  C +  ++  A + A ++ ++E+
Sbjct: 422 ARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 473



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 5/183 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDM 63
           N    N L+  Y + G    AR +F +MVD    VSW  LI G   +    +AF+L  +M
Sbjct: 410 NRFVQNALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM 468

Query: 64  RT--DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +   +GG  P+ +T  TLL GC+         ++H   ++   ++ + + ++LVD Y K 
Sbjct: 469 QQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC 528

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
            CL L+R VF  +P+++++++N LI  +   GL  EA  LF  M   G  +P++ TF AA
Sbjct: 529 GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAA 588

Query: 181 LSA 183
           L+A
Sbjct: 589 LAA 591


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/600 (37%), Positives = 343/600 (57%), Gaps = 3/600 (0%)

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G    A+++F  +     +P   TF  ALSA   L D+  G  V        + ++V
Sbjct: 85  SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV ++LL LY++   + +A K+F  MP  D V+++ M+  +    Q  ++++++R ++  
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                +     ++       ++++G  +H   +      +V  A SLVDMYAK G  + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  + H + V W+AMIS + Q G  +EAL LF  M  + I  D     S L A + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             L LG+ +H F++R  F  N   G+A +DMY+K GSL  A   F  + +R+++ WNA+I
Sbjct: 324 GFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           + C  +G  Q  L  F++M ++G +PD  +  S+LSA SH GL+EEG  +F  M   +K+
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKI 442

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P ++HY  +VD+L RSG  +EA  L+  M  EP   +W ++++ C  +K LE  +  AD
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            + +++   D      +SN+YA   +W+ V QV+K M++ G +K+   S +E++   HVF
Sbjct: 503 NILELQP-DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D+ HPQ  EI  K+  L  EM+K GY P T    HD +EE+K + L YHSERLAIAF
Sbjct: 562 VMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAF 621

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L+NT  G+ ++++KNLR C DCH AIK ISKI  REI VRD+ RFHHFKDG CSCRD+W
Sbjct: 622 GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 178/353 (50%), Gaps = 12/353 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y + G +  A ++F  M  R  V+W+ ++ G+    Q  +A +++  MR DG    
Sbjct: 149 LLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKG 207

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V    ++  C+          VH  +++ G    ++   SLVD Y K   LD+A RVF
Sbjct: 208 DEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF 267

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  ++ VS++A+I+GFA+ G ++EA++LF  MQ  G +P      +AL A   +  + 
Sbjct: 268 GLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR VH F+V+  F  N  +  A +D+YSK   +  A+ LF  + + D + +N MI C  
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-----KLDLQIGRQIHTQTIVTTA 306
            + + +++L LF+E+  T        F++LLS +++     +  L  GR ++   I    
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAE 446

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
              V     LVD+ A+ G  EEA ++  ++    TV  W A++S  +    LE
Sbjct: 447 KHYV----CLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 13/237 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K+G L  A  +F  MV R  VSW+ +I G++Q  Q  EA +LF +M+
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKIRC 123
              G  PD     + L  CS          VH  I+ +F +N IL    + +D Y K   
Sbjct: 303 AS-GIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCIL--GTAAIDMYSKCGS 359

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A+ +F  +  +D + +NA+I      G  ++A+ LF EM   G +P   TFA+ LSA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419

Query: 184 --GVGLAD---IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               GL +   +  GR V+ F  K    E  +V   L+DL ++   V EA  L   M
Sbjct: 420 LSHSGLVEEGKLWFGRMVNHF--KITPAEKHYV--CLVDLLARSGLVEEASDLLTSM 472


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/563 (39%), Positives = 335/563 (59%), Gaps = 3/563 (0%)

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+  G+++H  V+K  F  +VFVA +L+ +YS+   V +ARKLF +MP  D  S+N MI
Sbjct: 8   GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMI 67

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + Y  N    E+L +  E++           +++L V A   D+  G+ IH   I     
Sbjct: 68  SGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLE 127

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            E+ V+N+L++MYAK G    A+++F  L     V W  +I+ Y Q G   EA+ +++ M
Sbjct: 128 FELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLM 186

Query: 368 C-RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
                I  +Q T+ SIL A + + +L  G ++H  VI++   S+VF G+ L+DMY K G 
Sbjct: 187 EEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGK 246

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L DAI  F ++P +N V WNA+IS    +GD +  L+ F +M     +PD ++ +S+LSA
Sbjct: 247 LDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSA 306

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL+ +    FN M ++Y ++P  +HY  MVD+  R+G  + A   + +MP +PD  
Sbjct: 307 CSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDAS 366

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            W +++N+CRIH N+E  K A+++LF+++   +   YV +SNIYA  G+WE V  V+   
Sbjct: 367 AWGALLNACRIHGNIELGKHASERLFEVDS-ENVGYYVLLSNIYANVGKWEGVDDVRSLA 425

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           R+RG+RK   +S + L +KV VF   ++ HP+  EI R++ +L  ++K  GY PD    L
Sbjct: 426 RDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVL 485

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D +E+ K   L  HSERLAIA+ +I+T   +PI + KNLR C DCH   K IS IT RE
Sbjct: 486 QDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITERE 545

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRDSSRFHHFK G CSC D+W
Sbjct: 546 IIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 203/369 (55%), Gaps = 4/369 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H  ++K G+   + +  SLV  Y +   +  AR++F +MP +D  S+NA+I+G+ + G
Sbjct: 15  KIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNG 74

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              EA+ +  EM+  G K    T A+ L     + DI  G+ +H +V+K      +FV+N
Sbjct: 75  NAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSN 134

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFD 272
           AL+++Y+K   +  A+K+FG + + D VS+N +IT YA N    E+++++  + +     
Sbjct: 135 ALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEII 193

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            +Q  + ++L   ++   LQ G +IH Q I     S+V V   L+DMY KCG+ ++A  +
Sbjct: 194 PNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISL 253

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +   ++VPW AMIS Y   G+ E+AL LF EM    +  D  TF S+L A +    +
Sbjct: 254 FYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLV 313

Query: 393 SLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
           S  +   + +    G   ++     ++D++ ++G L+ A    K+MP + +  +W AL++
Sbjct: 314 SDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLN 373

Query: 451 ACAQNGDAQ 459
           AC  +G+ +
Sbjct: 374 ACRIHGNIE 382



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 177/358 (49%), Gaps = 21/358 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y + G +  AR+LF+ M  R   SW  +I GY Q     EA  +  +MR + G   
Sbjct: 35  LVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLE-GVKM 93

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D +T A++L  C++         +H  +IK G    L + N+L++ Y K   L  A++VF
Sbjct: 94  DAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF 153

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADI 190
             +  KD VS+N LITG+A+ GL  EAI++++ M +H    P+  T+ + L A   +  +
Sbjct: 154 G-LLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGAL 212

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G ++H  V+K     +VFV   L+D+Y K   + +A  LF ++P  + V +N MI+CY
Sbjct: 213 QQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCY 272

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             +   +++L+LFRE++  R       F +LLS  ++      G     Q        E 
Sbjct: 273 GVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHS-----GLVSDAQWCFNMMEEEY 327

Query: 311 KVANSL------VDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYVQKGNLE 358
            +  SL      VD++ + G  E A   F  +  +   P    W A+++A    GN+E
Sbjct: 328 GIKPSLKHYGCMVDLFGRAGELEMA---FNFIKKMPIQPDASAWGALLNACRIHGNIE 382



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 1/175 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y K G+L  A+++F  ++ +  VSW  LI GY+Q     EA ++++ M     
Sbjct: 133 SNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEE 191

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T+ ++L   S      + +++H  +IK    S + +   L+D Y K   LD A 
Sbjct: 192 IIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAI 251

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            +F ++P+K+SV +NA+I+ +   G  E+A++LF EM+    KP   TF + LSA
Sbjct: 252 SLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSA 306


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/760 (33%), Positives = 390/760 (51%), Gaps = 82/760 (10%)

Query: 28  LFNSMVDRTAVSW-TILIGGYSQKNQFREA---FKLFVDMRTDGGSDPDYVTFATLLSGC 83
           +FN + +    +W TI+      +N   +A   +KLF+       + PD  T+  LL  C
Sbjct: 60  IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASH----AKPDSYTYPILLQCC 115

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           +   +  E  Q+HA  +  G++  + + N+L++ Y     +  ARRVF+E P  D VS+N
Sbjct: 116 AARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWN 175

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
            L+ G+ + G  EEA ++F  M                                      
Sbjct: 176 TLLAGYVQAGEVEEAERVFEGMPE------------------------------------ 199

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKESLK 261
               N   +N+++ L+ +  CV +AR++F  +   E D VS++ M++CY  NE  +E+L 
Sbjct: 200 ---RNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALV 256

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           LF E++ +     +    + LS  +  L++++GR +H   +       V + N+L+ +Y+
Sbjct: 257 LFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYS 316

Query: 322 KCGRFEEAKEIFAN----LSHIS----------------------------TVPWTAMIS 349
            CG   +A+ IF +    L  IS                             V W+AMIS
Sbjct: 317 SCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMIS 376

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            Y Q     EAL LF EM    +  D+    S + A   LA+L LGK +H+++ R+    
Sbjct: 377 GYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQV 436

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           NV   + L+DMY K G +++A++ F  M E+ + +WNA+I   A NG  + +L  F DM 
Sbjct: 437 NVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMK 496

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           ++G  P+ ++ + VL AC H GL+ +G  YFNSM  ++K+    +HY  MVD+L R+G  
Sbjct: 497 KTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLL 556

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            EAE+L+  MP  PD   W +++ +CR H++ E  ++   +L +++   D   +V +SNI
Sbjct: 557 KEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGF-HVLLSNI 615

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA  G W +V +++  M + GV K    S +E    VH F A D+ HPQ N+I   ++ +
Sbjct: 616 YASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVV 675

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
             ++K EGY P TS    D DEE K  +L  HSE+LA+AF LI     +PI V KNLR C
Sbjct: 676 AAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRIC 735

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH  +KLISK   R+I VRD  RFHHFK G CSC DFW
Sbjct: 736 NDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 183/386 (47%), Gaps = 37/386 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFK 58
           MP +NT+++N +I+ + + G +  AR +FN +   +R  VSW+ ++  Y Q     EA  
Sbjct: 197 MPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALV 256

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG--------------Y 104
           LFV+M+   G   D V   + LS CS          VH   +K G              Y
Sbjct: 257 LFVEMK-GSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLY 315

Query: 105 NSI------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI 146
           +S                   LI  NS++  Y +   +  A  +F  MP+KD VS++A+I
Sbjct: 316 SSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMI 375

Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
           +G+A+     EA+ LF EMQ  G +P +    +A+SA   LA + LG+ +HA++ +    
Sbjct: 376 SGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQ 435

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
            NV ++  L+D+Y K  CV  A ++F  M E    ++N +I   A N   ++SL +F ++
Sbjct: 436 VNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADM 495

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGR 325
           + T    ++  F  +L    +   +  GR      I    I + +K    +VD+  + G 
Sbjct: 496 KKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGL 555

Query: 326 FEEAKEIFANLSHISTVP-WTAMISA 350
            +EA+E+  ++     V  W A++ A
Sbjct: 556 LKEAEELIDSMPMAPDVATWGALLGA 581



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 26/182 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N + +  LI  Y+K G +  A E+F +M ++   +W  +I G +      ++  +F DM+
Sbjct: 437 NVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMK 496

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE-------LIQVH---ADIIKFGYNSILIICNSL 114
              G+ P+ +TF  +L  C      N+       +I  H   A+I  +G          +
Sbjct: 497 KT-GTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYG---------CM 546

Query: 115 VDSYCKIRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKL---FVEMQ--HL 168
           VD   +   L  A  +   MP   D  ++ AL+    K   NE   +L    +++Q  H 
Sbjct: 547 VDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHD 606

Query: 169 GF 170
           GF
Sbjct: 607 GF 608


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/754 (34%), Positives = 408/754 (54%), Gaps = 21/754 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD--G 67
           N L+S Y + G +  A ++F  M  R  VSW  L+   +     R   +LF D   D  G
Sbjct: 103 NSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADP---RRGLELFRDCLEDLGG 159

Query: 68  GSDPDYVTFATLLSGCSE---PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + PD  T  T+L  C+    P+T      VH   +K G+++   + N LVD Y K   +
Sbjct: 160 TAAPDEATLVTVLPMCAALAWPETGR---AVHGLAVKSGWDAAPRVSNVLVDMYAKCGEM 216

Query: 125 DLARRVFKEMPQ---KDSVSFNALITGFAKEGLNEEAIKLFVEMQ--HLGFKPSDFTFAA 179
             A   F E P    ++ VS+N ++ G+A+ G    A  L  EMQ    G    + T  +
Sbjct: 217 ADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLS 276

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            L    GL ++A  R++HAFVV+    +    V NAL+  Y +  C++ A ++F  +   
Sbjct: 277 VLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSK 336

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGRQI 297
              S+N +I  +A N +   +++LFRE+      +   F   +LL    N   L  G+  
Sbjct: 337 MVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAA 396

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +      +  +  SL+ +Y +CGR   A+ +F  +     V W  MI+ Y Q G  
Sbjct: 397 HGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLP 456

Query: 358 EEALNLFIEMCRANISADQATFA--SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            E+L LF EM         +  A  S L A +EL ++ LGK++H F +++    + F  S
Sbjct: 457 GESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSS 516

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +++DMY+K GS+ DA   F  +  ++ VSW  +I+  A NG  +  +  ++ M + G +P
Sbjct: 517 SIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEP 576

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           D  + L +L AC H G++E+GL +F  M    K+  K EHYA ++ +L R+G F +A  L
Sbjct: 577 DGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVAL 636

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           M  MP EPD  + SSV+++C +H  +E  KK AD+L ++E  + A  YV  SN+YA + Q
Sbjct: 637 MEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHK-AEHYVLASNMYAGSRQ 695

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           W+ + +V+K +R+ GV K    SW+++  KV+ F A +   P+ +++R+   +L ++++ 
Sbjct: 696 WDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRA 755

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY PDT+  LH+ +EE KVE+L++HSE+ AIAF L+ T   + + V KN+R C DCH A
Sbjct: 756 AGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNA 815

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            KLISK+  REI VRD  RFHHF+DG CSC D+W
Sbjct: 816 AKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 208/437 (47%), Gaps = 37/437 (8%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLADIA 191
           +PQ     +N L+   ++ G + +A+ +   +     G  P  FT   AL +  G     
Sbjct: 30  LPQ-----WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD--- 81

Query: 192 LGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            GRQVHA   K    + + FV N+L+ +Y +   V +A K+F  M   + VS+N ++   
Sbjct: 82  -GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV 140

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL---QIGRQIHTQTIVTTAI 307
           A     +  L+LFR+        +    +TL++V+     L   + GR +H   + +   
Sbjct: 141 A---DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWD 197

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANL---SHISTVPWTAMISAYVQKGNLEEALNLF 364
           +  +V+N LVDMYAKCG   +A+  F      +  + V W  M+  Y + G    A  L 
Sbjct: 198 AAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLL 257

Query: 365 --IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMY 421
             ++M    + AD+ T  S+L   + L  L+  ++LH+FV+R G  ++     +AL+  Y
Sbjct: 258 REMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAY 317

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS-GYQPDSVSL 480
            + G L  A + F  +  + + SWNALI A AQNG+A A ++ F +M  + G +PD  S+
Sbjct: 318 GRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSI 377

Query: 481 LSVLSACSHC-----GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
            S+L AC +      G    G    N + +   +R       S++ +  + G  +   ++
Sbjct: 378 GSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIR------VSLLSVYIQCG-RESLARV 430

Query: 536 MAQMPFEPDEIMWSSVI 552
           +     E DE+ W+++I
Sbjct: 431 LFDAVEEKDEVSWNTMI 447



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 30/180 (16%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS N +I+GY ++G    + +LF  M  +    W                       
Sbjct: 438 KDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHW----------------------- 474

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                  P  +   + L  CSE        ++H   +K        + +S++D Y K   
Sbjct: 475 -------PSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGS 527

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D AR  F  +  KD+VS+  +ITG+A  G  +EA+ L+ +M   G +P  FT+   L A
Sbjct: 528 VDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMA 587



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +++  ++ +I  Y K G++  AR  F+ +  + AVSWT++I GY+   + +EA  L+  M
Sbjct: 510 EDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKM 569

Query: 64  RTDGGSDPDYVTFATLLSGCS 84
             + G +PD  T+  LL  C 
Sbjct: 570 GRE-GMEPDGFTYLGLLMACG 589


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/695 (34%), Positives = 387/695 (55%), Gaps = 39/695 (5%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKEMPQKDSVSFNALIT 147
           L  +HA +IK G ++     + L++ +C +      L  A  VF+ + + + + +N +  
Sbjct: 3   LRMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFR 61

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G A       A+ L+V M  LG  P+ +TF   L +         G+Q+H  V+K  +  
Sbjct: 62  GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------------- 251
           +++V  +L+ +Y ++  + +ARK+F +    D VSY  +IT YA                
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181

Query: 252 ------WNEQY---------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
                 WN            KE+L+LF+E+  T     +    +++S  A    +++GRQ
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H+        S +K+ N+L+D+Y KCG  E A  +F  LS+   + W  +I  Y     
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFSG 414
            +EAL LF EM R+  S +  T  SIL A A L ++ +G+ +H ++ +   G  +     
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++L+DMYAK G ++ A Q F  +  R++ SWNA+I   A +G A A    F  M ++  +
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD ++ + +LSACSH G+++ G   F SM + YK+ PK EHY  M+D+L  SG F EAE+
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 481

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++  M  EPD ++W S++ +C++H N+E  +  A  L K+E  ++   YV +SNIYA AG
Sbjct: 482 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP-KNPGSYVLLSNIYATAG 540

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W  V++++  + ++G++KV   S +E+ S VH F   D+ HP+  EI   +E +   ++
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 600

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ + ++KNLR C +CH 
Sbjct: 601 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 660

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 661 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 237/504 (47%), Gaps = 41/504 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  +  G++  +    A  L+V M    G  P+  TF  LL
Sbjct: 37  GLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM-ISLGLLPNCYTFPFLL 95

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
             C++     E  Q+H  ++K GY+  L +  SL+  Y +   L+ AR+VF         
Sbjct: 96  KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155

Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                  E+P KD VS+NA+I+G+A+ G N+EA++LF EM    
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T  + +SA    A I LGRQVH+++    F  N+ + NAL+DLY K   V  A 
Sbjct: 216 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335

Query: 290 DLQIGRQIHTQTIVTTAISEVKVAN----SLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
            ++IGR IH    +   +  V  A+    SL+DMYAKCG  E A+++F ++ + S   W 
Sbjct: 336 AIEIGRWIHVY--INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIR 404
           AMI  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +  S    
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 453

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
                 +     ++D+   SG  K+A +    M  E + V W +L+ AC  +G+ +    
Sbjct: 454 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 513

Query: 464 SFEDMVQ-SGYQPDSVSLLSVLSA 486
             +++++     P S  LLS + A
Sbjct: 514 YAQNLIKIEPKNPGSYVLLSNIYA 537



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 183/364 (50%), Gaps = 13/364 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G +A+A+++F+ +  +  VSW  +I GY++    +EA +LF +
Sbjct: 151 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 210

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  +++S C++  +     QVH+ I   G+ S L I N+L+D Y K  
Sbjct: 211 MMKT-NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANA------LLDLYSKHDCVVEARKLFGEMP 236
           A   L  I +GR +H ++ K        VANA      L+D+Y+K   +  A+++F  + 
Sbjct: 330 ACAHLGAIEIGRWIHVYINK----RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSIL 385

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
                S+N MI  +A + +   +  +F  ++    +     F  LLS  ++   L +GR 
Sbjct: 386 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 445

Query: 297 IHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           I         I+ +++    ++D+    G F+EA+E+   +      V W +++ A    
Sbjct: 446 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH 505

Query: 355 GNLE 358
           GN+E
Sbjct: 506 GNVE 509


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/751 (33%), Positives = 409/751 (54%), Gaps = 20/751 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G+  +A +LF+ M     V++  LI GY Q +   +   LF D     G 
Sbjct: 98  NNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILF-DKARRLGL 156

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D  T A  L+ CS+    +    +H  I+ +G  S +++ NSL+D Y K   +D AR 
Sbjct: 157 KLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARI 216

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA------ 183
           +F    + D VS+N+LI G+ + G  EE + +  +M   G   + +T  +AL A      
Sbjct: 217 LFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFN 276

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
           G  +     G  +H   +K     +V V  ALLD+Y+K   + +A ++F +M + + V Y
Sbjct: 277 GCKM----FGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMY 332

Query: 244 NVMITCYAWNEQYKE-----SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           N M+      E  ++     +L LF E++      S F +S+LL       D +  +Q+H
Sbjct: 333 NAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVH 392

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
                   +S+  + + L+D+Y+  G   +A   F ++ +++ VP TAMI  Y+Q G  E
Sbjct: 393 ALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFE 452

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
            AL+LF E+       D+   ++I+ + A +  L  G+Q+     + G        ++ +
Sbjct: 453 SALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQI 512

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MYAKSG L  A  TF++M   +IVSW+ +I + AQ+G A   L+ FE M   G +P+  
Sbjct: 513 WMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHF 572

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + L VL ACSH GL+EEGL+YF++M + YK++   +H   +VD+L R+G   +AE L+ +
Sbjct: 573 AFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILR 632

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           + FE + +MW +++++CRIHK+   A++ A ++ ++E L  +A YV + NIY  AG   +
Sbjct: 633 LGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA-SASYVLLYNIYMDAGNKLA 691

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            S+V+  M ER ++K    SW+++  KV+ F + D  H  + +I  K++ ++   K+   
Sbjct: 692 ASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDS 751

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
             D    L  + E   + ++ YHSE+LA+AF ++   E +P+ VMKNLR C DCH  +KL
Sbjct: 752 AKDI---LGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKL 808

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            S +  RE+ VRDS RFHHFKDG CSC D+W
Sbjct: 809 FSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 248/488 (50%), Gaps = 9/488 (1%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           V +  L+   ++    N    VH+ +IK  +   L + N+L++ YCK      A ++F +
Sbjct: 60  VDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDK 119

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           M + + V++N+LI+G+ +    ++ + LF + + LG K   +T A AL+A     +++ G
Sbjct: 120 MSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAG 179

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           + +H  ++       V + N+L+D+YSK   V  AR LF    ++DGVS+N +I  Y  N
Sbjct: 180 KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQN 239

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVK 311
            +Y+E L + +++       + +   + L   ++  +     G  +H   I      +V 
Sbjct: 240 GKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVV 299

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE-----ALNLFIE 366
           V  +L+DMYAK G  ++A +IF  +   + V + AM++  +Q+  +E+     ALNLF E
Sbjct: 300 VGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFE 359

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    I     T++S+L+A   +      KQ+H+ + ++G +S+ + GS L+D+Y+  GS
Sbjct: 360 MKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGS 419

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + DA+  F  +    IV   A+I    QNG+ ++ L  F +++    +PD     +++S+
Sbjct: 420 MMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSS 479

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C++ G++  G Q     T K  +        S + +  +SG    A     QM   PD +
Sbjct: 480 CANMGMLRSGEQIQGHAT-KVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME-NPDIV 537

Query: 547 MWSSVINS 554
            WS++I S
Sbjct: 538 SWSTMICS 545



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 214/462 (46%), Gaps = 12/462 (2%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V TN LI  Y K G +  AR LF+       VSW  LI GY Q  ++ E   +   M  
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 254

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +G +   Y T  + L  CS      ++    +H   IK G +  +++  +L+D Y K   
Sbjct: 255 NGLAFNTY-TLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGS 313

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE-----AIKLFVEMQHLGFKPSDFTFA 178
           LD A ++F +M  K+ V +NA++ G  ++   E+     A+ LF EM+  G KPS FT++
Sbjct: 314 LDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYS 373

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L A + + D    +QVHA + K   + + ++ + L+DLYS    +++A   F  +  +
Sbjct: 374 SLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNL 433

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             V    MI  Y  N +++ +L LF EL        +F  ST++S  AN   L+ G QI 
Sbjct: 434 TIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQ 493

Query: 299 TQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
                   IS   +  NS + MYAK G    A   F  + +   V W+ MI +  Q G+ 
Sbjct: 494 GHA-TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHA 552

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSA 416
            EAL  F  M    I  +   F  +L A +    +  G +    + +   M  +V     
Sbjct: 553 MEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVC 612

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           ++D+  ++G L DA      +  E   V W AL+SAC  + D
Sbjct: 613 VVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKD 654



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 151/291 (51%), Gaps = 10/291 (3%)

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L  G+ +H+  I T+    + + N+L++MY KCG    A ++F  +S  + V + ++IS 
Sbjct: 75  LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           YVQ  NL++ + LF +  R  +  D+ T A  L A ++  +LS GK +H  ++  G  S 
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQ 194

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           V   ++L+DMY+K G +  A   F    + + VSWN+LI+   QNG  +  L   + M Q
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 254

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ----KYKLRPKKEHYASMVDILCRS 526
           +G   ++ +L S L ACS       G + F +M      K  L        +++D+  ++
Sbjct: 255 NGLAFNTYTLGSALKACSSN---FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKT 311

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE--FAKKAADQLFKME 575
           G  D+A ++  QM  + + +M+++++      + +E   A KA +  F+M+
Sbjct: 312 GSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMK 361


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/713 (33%), Positives = 407/713 (57%), Gaps = 18/713 (2%)

Query: 38  VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHA 97
           VSWT ++    +  ++ EAF+++V M  + G  P+  TF  LL   S     +    +HA
Sbjct: 184 VSWTTMLSSLVENGKWGEAFEIYVKM-IESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHA 242

Query: 98  DIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
            +I FG    L++  ++VD Y K R +  A +V    P+ D   +  LI+GF +     E
Sbjct: 243 HLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVRE 302

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           AI +F +M+  G  P++FT+++ L+A   +  + LG Q H+ V+     +++++ NAL+D
Sbjct: 303 AISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVD 362

Query: 218 LYSK-HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           +Y K       A K+F E+   + + +  +I  +A  ++ ++S +LF E+Q      + F
Sbjct: 363 MYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAAGVRPNSF 421

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             S +L   +    L     +H   I T    ++ VAN+LVD YA  G  +EA  +   +
Sbjct: 422 TMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTM 481

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
           +   ++ +T + +   QKG+   AL + I MC   I  D+ + AS L A+A L ++  GK
Sbjct: 482 NLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGK 541

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           QLH + ++SGF       ++L+ +Y+K GS+ DA + FK++ E +  SWN LIS  + NG
Sbjct: 542 QLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNG 601

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
                L +F+DM  +G +PDS++LLS++SACSH GL+E GL+YF+SM ++Y + PK +HY
Sbjct: 602 LISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHY 661

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             +VD+L R G  +EA  ++ +M F+PD ++  +++N+C +H N+   +  A +  +++ 
Sbjct: 662 MCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDP 721

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
             D A Y+ ++N+Y  AG  +   + ++ MRERG+R+     W+E++S+VH F+A ++++
Sbjct: 722 -SDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKIN 780

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
              +EI  K+E L+ E +   Y+       + E+E+       YH E+LA+AF ++N P 
Sbjct: 781 E--DEITEKLEFLITEFRNRRYQ-------YQENEDK-----FYHPEQLAVAFGVLNAPS 826

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            SPI + KN   C+ CH  I L +++ GREI +RD  RFH FKDG CSCRD +
Sbjct: 827 TSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 271/549 (49%), Gaps = 7/549 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN L+S Y K+  +  AR LF+ M +R  VSWT ++  +++     +A +LF DM    G
Sbjct: 52  TNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLF-DMMIGSG 110

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T ++ L  C         +Q+H   +K G      +  SLV+ Y K  C  +  
Sbjct: 111 EYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEA 170

Query: 129 RVFKEMPQK--DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
                + +   D VS+  +++   + G   EA +++V+M   G  P++FTF   L A   
Sbjct: 171 WKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSS 230

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              ++ G+ +HA ++      N+ +  A++D+YSK   +V+A K+    PE D   +  +
Sbjct: 231 FLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTL 290

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ +  N Q +E++ +FR+++ +    + F +S+LL+  ++ L L +G Q H++ I+   
Sbjct: 291 ISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGL 350

Query: 307 ISEVKVANSLVDMYAKCGRF-EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             ++ + N+LVDMY KC      A ++F  ++  + + WT++I+ + +K  LE++  LF 
Sbjct: 351 EDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFA 409

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM  A +  +  T ++IL A ++  SL     LH  +I++    ++   +AL+D YA  G
Sbjct: 410 EMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVG 469

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            + +A      M  R+ +++  L +   Q G     LK    M   G + D  SL S LS
Sbjct: 470 MIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLS 529

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           A +  G +E G Q  +  + K   +       S+V +  + G   +A +    +  EPD 
Sbjct: 530 AAAGLGTMETGKQ-LHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDA 587

Query: 546 IMWSSVINS 554
             W+ +I+ 
Sbjct: 588 FSWNGLISG 596



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 229/413 (55%), Gaps = 5/413 (1%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           +LS C+  ++  E I +H+ IIK G    L + N+L+  Y K   +  AR +F EMP +D
Sbjct: 21  VLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+  +++   K   + +A++LF  M   G  P++FT ++AL +   L +   G Q+H 
Sbjct: 80  VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCV-VEARKLFGEMPE-VDGVSYNVMITCYAWNEQY 256
             VK     N FV  +L++ Y+K  C  VEA KL   + +  D VS+  M++    N ++
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKW 199

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            E+ +++ ++  +    ++F F  LL  V++ L L  G+ +H   I+  A   + +  ++
Sbjct: 200 GEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAV 259

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           VDMY+KC R  +A ++           WT +IS + Q   + EA+++F +M  + +  + 
Sbjct: 260 VDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNN 319

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL-KDAIQTFK 435
            T++S+L AS+ + SL LG+Q HS VI  G   +++ G+AL+DMY K   +  +A++ F+
Sbjct: 320 FTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFR 379

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           E+   N++ W +LI+  A+    + + + F +M  +G +P+S ++ ++L ACS
Sbjct: 380 EITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACS 431



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 225/477 (47%), Gaps = 13/477 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V    ++  Y K   +  A ++ N   +     WT LI G++Q  Q REA  +F DM 
Sbjct: 252 NLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDME 311

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+  T+++LL+  S   + +   Q H+ +I  G    L I N+LVD Y K   +
Sbjct: 312 LS-GLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHI 370

Query: 125 DL-ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              A +VF+E+   + + + +LI GFA++ L E++ +LF EMQ  G +P+ FT +A L A
Sbjct: 371 TTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGA 429

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +     +H  ++KT    ++ VANAL+D Y+    + EA  + G M   D ++Y
Sbjct: 430 CSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITY 489

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +         +  +LK+   +        +F  ++ LS  A    ++ G+Q+H  ++ 
Sbjct: 490 TCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVK 549

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +       V+NSLV +Y+KCG   +A   F ++S      W  +IS +   G +  AL+ 
Sbjct: 550 SGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALST 609

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYA 422
           F +M  A +  D  T  S++ A +    L LG +  HS          +     L+D+  
Sbjct: 610 FDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLG 669

Query: 423 KSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           + G L++A+   ++M   P+  I     L++AC  +G+        EDM +   + D
Sbjct: 670 RGGRLEEAMGVIEKMSFKPDSLIC--KTLLNACNLHGNVALG----EDMARRCLELD 720



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 2/165 (1%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G  +HS +I+ G   +++  + LL +YAK+  +  A   F EMP R++VSW  ++S
Sbjct: 29  SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           +  +       L+ F+ M+ SG  P+  +L S L +C   G  E G+Q   S   K  L 
Sbjct: 89  SHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAV-KLGLE 147

Query: 511 PKKEHYASMVDILCRSGCFD-EAEKLMAQMPFEPDEIMWSSVINS 554
             +    S+V+   + GC   EA KL++ +    D + W+++++S
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSS 192


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/649 (35%), Positives = 360/649 (55%), Gaps = 44/649 (6%)

Query: 111 CNS-----LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
           CNS     L+ +Y  ++ +  AR+VF E+P+++ +  N +I  +   G   E +K+F  M
Sbjct: 72  CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
                +P  +TF   L A      I +GR++H    K      +FV N L+ +Y K   +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
            EAR +  EM   D VS+N ++  YA N+++ ++L++ RE++  +        ++LL  V
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +N           T+ +                MY K        ++F  +   S V W 
Sbjct: 252 SNTT---------TENV----------------MYVK--------DMFFKMGKKSLVSWN 278

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            MI  Y++     EA+ L+  M       D  +  S+L A  + ++LSLGK++H ++ R 
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
             + N+   +AL+DMYAK G L+ A   F+ M  R++VSW A+ISA   +G     +  F
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
             +  SG  PDS++ ++ L+ACSH GL+EEG   F  MT  YK+ P+ EH A MVD+L R
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA + +  M  EP+E +W +++ +CR+H + +    AAD+LF++     +  YV 
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP-EQSGYYVL 517

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SNIYA AG+WE V+ ++  M+ +G++K    S VE+   +H F   D  HPQ++EI R+
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE-----GSPI 700
           ++ L+++MK+ GY PD+  ALHD +EE K   L  HSE+LAI FAL+NT E      + I
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            + KNLR C DCH A KLIS+IT REI +RD++RFH F+ G CSC D+W
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 41/469 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y    ++A+AR++F+ + +R  +   ++I  Y     + E  K+F  M       P
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRP 138

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  +L  CS   T     ++H    K G +S L + N LV  Y K   L  AR V 
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EM ++D VS+N+L+ G+A+    ++A+++  EM+ +       T A+ L A        
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-------- 250

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                    V     ENV        +Y K         +F +M +   VS+NVMI  Y 
Sbjct: 251 ---------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E+++L+  ++   F+      +++L    +   L +G++IH        I  + 
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+DMYAKCG  E+A+++F N+     V WTAMISAY   G   +A+ LF ++  + 
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDA 430
           +  D   F + L A +    L  G+     +     ++      A ++D+  ++G +K+A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465

Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
            +  ++M  E N   W AL+ AC  + D    L + + +      QSGY
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 36/343 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K G L+ AR + + M  R  VSW  L+ GY+Q  +F +A ++  +M +   S
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D  T A+LL   S   T N +                                   + 
Sbjct: 239 H-DAGTMASLLPAVSNTTTENVM---------------------------------YVKD 264

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M +K  VS+N +I  + K  +  EA++L+  M+  GF+P   +  + L A    + 
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++LG+++H ++ +   + N+ + NAL+D+Y+K  C+ +AR +F  M   D VS+  MI+ 
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
           Y ++ +  +++ LF +LQ +        F T L+  ++   L+ GR           I+ 
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            ++    +VD+  + G+ +EA     ++S   +   W A++ A
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 8/331 (2%)

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
           D++  R +H++ I+        +   L+  YA       A+++F  +   + +    MI 
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           +YV  G   E + +F  MC  N+  D  TF  +L+A +   ++ +G+++H    + G  S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            +F G+ L+ MY K G L +A     EM  R++VSWN+L+   AQN      L+   +M 
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGC 528
                 D+ ++ S+L A S+     E + Y   M   +K+  K    +  M+ +  ++  
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMF--FKMGKKSLVSWNVMIGVYMKNAM 289

Query: 529 FDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
             EA +L ++M    FEPD +  +SV+ +C     L   KK    + + + + +     A
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           + ++YA  G  E    V + M+ R V   TA
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 34/189 (17%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI  Y K G L  AR++F +M  R  VSWT +I  Y    +  +A  LF  ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD + F T L+ CS           HA +++ G +                 C 
Sbjct: 403 -DSGLVPDSIAFVTTLAACS-----------HAGLLEEGRS-----------------CF 433

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            L    +K  P+ + ++   ++    + G  +EA +    +Q +  +P++  + A L A 
Sbjct: 434 KLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRF---IQDMSMEPNERVWGALLGAC 488

Query: 185 VGLADIALG 193
              +D  +G
Sbjct: 489 RVHSDTDIG 497


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/709 (34%), Positives = 392/709 (55%), Gaps = 42/709 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKE 133
           +LL  C    T   L  +HA +IK G ++     + L++ +C +      L  A  VF+ 
Sbjct: 7   SLLHNCK---TLQSLRMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFET 62

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           + + + + +N +  G A       A+ L+V M  LG  P+ +TF   L +         G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA-- 251
           +Q+H  V+K  +  +++V  +L+ +Y ++  + +ARK+F +    D VSY  +IT YA  
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182

Query: 252 --------------------WNEQY---------KESLKLFRELQFTRFDRSQFPFSTLL 282
                               WN            KE+L+LF+E+  T     +    +++
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S  A    +++GRQ+H+        S +K+ N+L+D+Y KCG  E A  +F  LS+   +
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W  +I  Y      +EAL LF EM R+  S +  T  SIL A A L ++ +G+ +H ++
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI 362

Query: 403 IR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            +   G  +     ++L+DMYAK G ++ A Q F  +  R++ SWNA+I   A +G A A
Sbjct: 363 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 422

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
               F  M ++  +PD ++ + +LSACSH G+++ G   F SM + YK+ PK EHY  M+
Sbjct: 423 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 482

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L  SG F EAE+++  M  EPD ++W S++ +C+++ N+E  +  A  L K+E  ++ 
Sbjct: 483 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEP-KNP 541

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV +SNIYA AG+W  V++++  + ++G++KV   S +E+ S VH F   D+ HP+  
Sbjct: 542 GSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 601

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 661

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 235/504 (46%), Gaps = 41/504 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W  +  G++  +    A  L+V M    G  P+  TF  LL
Sbjct: 52  GLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM-ISLGLLPNCYTFPFLL 110

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
             C++     E  Q+H  ++K GY+  L +  SL+  Y +   L+ AR+VF         
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170

Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                  E+P KD VS+NA+I+G+A+ G N+EA++LF EM    
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T  + +SA    A I LGRQVH+++    F  N+ + NAL+DLY K   V  A 
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350

Query: 290 DLQIGRQIHTQTIVTTAISEVKVAN----SLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
            ++IGR IH    +   +  V  A+    SL+DMYAKCG  E A+++F ++ + S   W 
Sbjct: 351 AIEIGRWIHVY--INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 408

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIR 404
           AMI  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +  S    
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 468

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
                 +     ++D+   SG  K+A +    M  E + V W +L+ AC    + +    
Sbjct: 469 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGES 528

Query: 464 SFEDMVQ-SGYQPDSVSLLSVLSA 486
             +++++     P S  LLS + A
Sbjct: 529 YAQNLIKIEPKNPGSYVLLSNIYA 552



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 182/364 (50%), Gaps = 13/364 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G +A+A+++F+ +  +  VSW  +I GY++    +EA +LF +
Sbjct: 166 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  +++S C++  +     QVH+ I   G+ S L I N+L+D Y K  
Sbjct: 226 MMKT-NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ +  KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANA------LLDLYSKHDCVVEARKLFGEMP 236
           A   L  I +GR +H ++ K        VANA      L+D+Y+K   +  A+++F  + 
Sbjct: 345 ACAHLGAIEIGRWIHVYINK----RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSIL 400

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
                S+N MI  +A + +   +  +F  ++    +     F  LLS  ++   L +GR 
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 460

Query: 297 IHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           I         I+ +++    ++D+    G F+EA+E+   +      V W +++ A    
Sbjct: 461 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMY 520

Query: 355 GNLE 358
            N+E
Sbjct: 521 ANVE 524



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 155/333 (46%), Gaps = 41/333 (12%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE---AKEIFANLSH 338
           LS++ N   LQ  R IH Q I T   +     + L++       F+    A  +F  +  
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + + W  M   +    +   AL L++ M    +  +  TF  +L++ A+  +   G+Q+
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK----------------------- 435
           H  V++ G+  +++  ++L+ MY ++G L+DA + F                        
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185

Query: 436 --------EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                   E+P +++VSWNA+IS  A+ G+ +  L+ F++M+++  +PD  +++SV+SAC
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +    IE G Q  +S    +      +   +++D+  + G  + A  L   + ++ D I 
Sbjct: 246 AQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVIS 303

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           W+++I     H NL    K A  LF+ E LR  
Sbjct: 304 WNTLIGG-YTHMNL---YKEALLLFQ-EMLRSG 331


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/784 (32%), Positives = 414/784 (52%), Gaps = 43/784 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++T  +N LIS Y+K      A  LF S+     VS+T LI   S+  Q   A  LF+ M
Sbjct: 96  EDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLISFLSKHRQ-HHALHLFLRM 154

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            T     P+  T+  +L+ CS         +Q+HA  +K  +     + N+LV  Y K  
Sbjct: 155 TTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHA 214

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAAL 181
               A ++F ++P++D  S+N +I+   ++ L + A +LF  MQ    F+  DFT +  L
Sbjct: 215 SFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILL 274

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-------------- 227
           +A   L +   G+QVHA  VK     ++ V N L+  YSK   V +              
Sbjct: 275 TASASLME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVI 331

Query: 228 -----------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                            A K+F EMPE + VSYN ++  +  NEQ  E+++LF  +    
Sbjct: 332 TWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEG 391

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + + F  ++++       D ++ +Q+H   +     S   V  +L+DMY +CGR  +A 
Sbjct: 392 LELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAG 451

Query: 331 EIFAN--LSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRANISADQATFASILRASA 387
           ++F    L   S+V WTAMI  Y + G  EEA+ LF +      +  D+   AS+L    
Sbjct: 452 KMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCG 511

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            +  L +GKQ+H  VI+ G   N+  G+A++ MY K GS+ DA++ F +MP  +IV+WN 
Sbjct: 512 TIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNT 571

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC--SHCGLIEEGLQYFNSMTQ 505
           LIS    +      L+ + +M+  G +P+ V+ + ++SA   ++  L+++    FNSM  
Sbjct: 572 LISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRT 631

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
            Y++ P   HYAS + +L   G   EA + +  MPF+P  ++W  +++ CR+HKN    K
Sbjct: 632 VYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGK 691

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
            AA  +  +E  +D + ++ +SN+Y+ +G+W+    V++ MRE+G RK  A SW+  + K
Sbjct: 692 WAAQNILALEP-KDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKK 750

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           ++ F   D  HPQ  +I+R +E L+ E  K GY+PDTS  LH+ +E  K   L +HS +L
Sbjct: 751 INSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKL 810

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           A  + ++ T  G PI ++KN+  C DCHA +K  S +T R+I +RDSS FH F +G CSC
Sbjct: 811 AATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQCSC 870

Query: 746 RDFW 749
           +D W
Sbjct: 871 KDCW 874



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 10/293 (3%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L V +   D  + + +H  T++     +  ++N+L+  Y K   F  A  +F +L   + 
Sbjct: 71  LHVSSRSGDTHLAKTVHA-TLLKRDEEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNV 129

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRA-SAELASLSLGKQLH 399
           V +T +IS ++ K     AL+LF+ M  R+++  ++ T+ ++L A S+ L     G QLH
Sbjct: 130 VSYTTLIS-FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLH 188

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           +  +++    + F  +AL+ +YAK  S   A++ F ++P R+I SWN +ISA  Q+    
Sbjct: 189 AAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYD 248

Query: 460 ATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              + F +M     ++ D  +L  +L+A +    + EG Q  ++   K  L         
Sbjct: 249 TAFRLFRNMQATDAFRVDDFTLSILLTASAS---LMEG-QQVHAHAVKLGLETDLNVGNG 304

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           ++    + G  D+ E L   M    D I W+ ++ +      +  A K  D++
Sbjct: 305 LIGFYSKFGNVDDVEWLFEGMRVR-DVITWTEMVTAYMEFGLVNLALKVFDEM 356


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 425/742 (57%), Gaps = 10/742 (1%)

Query: 13  ISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
           + G+  SG +  A +LF+ M       W ++I G++    + EA +L+  M    G   D
Sbjct: 67  LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRM-VFSGVKAD 125

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
             T+  ++   +   +  E  ++HA +IK  + S + +CNSL+  Y K+ C   A +VF+
Sbjct: 126 SFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFE 185

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           EMP++D VS+N++I+G+        ++ LF EM   GFKP  F+  +AL A   +    +
Sbjct: 186 EMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNM 245

Query: 193 GRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           G+++H   V++     +V V  ++LD+YSK+  V  A ++F  + + + V++NV+I CYA
Sbjct: 246 GKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYA 305

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N +  ++   F+++  +  +  Q    TL++++     L+ GR IH   +    +  + 
Sbjct: 306 RNSRVTDAFLCFQKM--SEQNGLQPDVITLINLLPACAILE-GRTIHGYAMRRGFLPHIV 362

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +  +L+DMY + G+ + A+ IF  ++  + + W ++I+AYVQ G    AL LF ++  ++
Sbjct: 363 LDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSS 422

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T ASIL A AE  SLS G+Q+H+++++S + SN    ++L+ MYA  G L+DA 
Sbjct: 423 LLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDAR 482

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  +  +++VSWN++I A A +G  + ++  F +M+ S   P+  +  S+L+ACS  G
Sbjct: 483 KCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISG 542

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           +++EG +YF SM ++Y + P  EHY  M+D++ R+G F  A++ + +MPF P   +W S+
Sbjct: 543 MVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSL 602

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +N+ R H ++  A+ AA+Q+FKME   +   YV + N+YA A +WE V+++K  M  +G+
Sbjct: 603 LNASRNHNDITVAEFAAEQIFKMEH-DNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGI 661

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE----NLMQEMKKEGYKPDTSCALH 667
            + ++ S VE KSK HV T  D  H +TN+I   ++     + +E +++ Y    S    
Sbjct: 662 SRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRR 721

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           +   + +  S + HS RLA  F LI+T  G  + V  N R C  CH  ++  SK+T REI
Sbjct: 722 ETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREI 781

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            V DS  FHHF +G CSC ++W
Sbjct: 782 VVGDSKIFHHFSNGRCSCGNYW 803



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 224/464 (48%), Gaps = 39/464 (8%)

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL------------------- 168
           R  +K   Q +  +    + GFA  GL E+A++LF EM                      
Sbjct: 49  RDRYKVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYF 108

Query: 169 ------------GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
                       G K   FT+   + +  G++ +  G+++HA V+K  FV +V+V N+L+
Sbjct: 109 EALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLI 168

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
            LY K  C  +A K+F EMPE D VS+N MI+ Y   E    SL LF+E+    F   +F
Sbjct: 169 SLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRF 228

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVT-TAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
              + L   ++     +G+++H   + +     +V V  S++DMY+K G    A+ IF  
Sbjct: 229 STMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKC 288

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSL 394
           +   + V W  +I  Y +   + +A   F +M   N +  D  T  ++L A A L     
Sbjct: 289 IIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE---- 344

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+ +H + +R GF+ ++   +AL+DMY + G LK A   F  + E+N++SWN++I+A  Q
Sbjct: 345 GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ 404

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG   + L+ F+ +  S   PDS ++ S+L A +    + EG Q  ++   K +      
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQ-IHAYIVKSRYGSNTI 463

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
              S+V +    G  ++A K    +  + D + W+S+I +  +H
Sbjct: 464 ILNSLVHMYAMCGDLEDARKCFNHVLLK-DVVSWNSIIMAYAVH 506



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 213/467 (45%), Gaps = 52/467 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +ISGY+                         L  G+     F+E  K  
Sbjct: 187 MPERDIVSWNSMISGYLA------------------------LEDGFRSLMLFKEMLKF- 221

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSE---PDTANELIQVHADIIKFGYNSILIICNSLVDS 117
                  G  PD  +  + L  CS    P+   EL   HA   +     ++++  S++D 
Sbjct: 222 -------GFKPDRFSTMSALGACSHVYSPNMGKEL-HCHAVRSRIETGDVMVM-TSILDM 272

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFT 176
           Y K   +  A R+FK + Q++ V++N LI  +A+     +A   F +M +  G +P   T
Sbjct: 273 YSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVIT 332

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               L A      I  GR +H + ++  F+ ++ +  AL+D+Y +   +  A  +F  + 
Sbjct: 333 LINLLPA----CAILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIA 388

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST----LLSVVANKLDLQ 292
           E + +S+N +I  Y  N +   +L+LF++L    +D S  P ST    +L   A  L L 
Sbjct: 389 EKNLISWNSIIAAYVQNGKNYSALELFQKL----WDSSLLPDSTTIASILPAYAESLSLS 444

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
            GRQIH   + +   S   + NSLV MYA CG  E+A++ F ++     V W ++I AY 
Sbjct: 445 EGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYA 504

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNV 411
             G    ++ LF EM  + +  +++TFAS+L A +    +  G +    + R  G    +
Sbjct: 505 VHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 564

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGD 457
                +LD+  ++G+   A +  +EMP       W +L++A   + D
Sbjct: 565 EHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHND 611


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/658 (34%), Positives = 363/658 (55%), Gaps = 36/658 (5%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+++F  +PQ D  + + LI+ F   GL  EAI+L+  ++  G KP +  F     A   
Sbjct: 85  AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
             D +  ++VH   ++   + + F+ NAL+  Y K  CV  AR++F ++   D VS+  M
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSM 204

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            +CY      +  L +F E+ +     +    S++L   +   DL+ GR IH   +    
Sbjct: 205 SSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM 264

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           I  V V ++LV +YA+C   ++A+ +F  + H   V W  +++AY      ++ L LF +
Sbjct: 265 IENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQ 324

Query: 367 MCRANISADQATF-----------------------------------ASILRASAELAS 391
           M    + AD+AT+                                   +S L A + L S
Sbjct: 325 MSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILES 384

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L +GK++H +V R   + ++ + +AL+ MYAK G L  +   F  +  +++V+WN +I A
Sbjct: 385 LRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIA 444

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            A +G+ +  L  FE M+QSG +P+SV+   VLS CSH  L+EEGLQ FNSM + + + P
Sbjct: 445 NAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEP 504

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
              HYA MVD+  R+G   EA + + +MP EP    W +++ +CR++KN+E AK +A++L
Sbjct: 505 DANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKL 564

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
           F++E   +   YV++ NI   A  W   S+ +  M+ERG+ K    SW+++  +VH F  
Sbjct: 565 FEIEP-NNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVV 623

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D+ + ++++I   ++ L ++MK  GYKPDT   L D D+E K ESL  HSE+LA+AF +
Sbjct: 624 GDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGI 683

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +N    S I V KNLR C DCH AIK +SK+ G  I VRDS RFHHF++G CSC+D W
Sbjct: 684 LNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 227/478 (47%), Gaps = 38/478 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+   +  G+   A++LF+++      + + LI  ++ +    EA +L+  +R  G   P
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG-IKP 130

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
               F T+   C     A+ + +VH D I+ G  S   + N+L+ +Y K +C++ ARRVF
Sbjct: 131 HNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++  KD VS+ ++ + +   GL    + +F EM   G KP+  T ++ L A   L D+ 
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR +H F V+   +ENVFV +AL+ LY++   V +AR +F  MP  D VS+N ++T Y 
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310

Query: 252 WNEQYKESLKLF-----------------------------------RELQFTRFDRSQF 276
            N +Y + L LF                                   R++Q   F  +Q 
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
             S+ L   +    L++G+++H        I ++    +LV MYAKCG    ++ +F  +
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMI 430

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                V W  MI A    GN  E L LF  M ++ I  +  TF  +L   +    +  G 
Sbjct: 431 CRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGL 490

Query: 397 QLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           Q+ + + R   +  +    + ++D+++++G L +A +  + MP E    +W AL+ AC
Sbjct: 491 QIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGAC 548



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 173/388 (44%), Gaps = 38/388 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K   +  AR +F+ +V +  VSWT +   Y      R    +F +M  +G  
Sbjct: 171 NALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNG-V 229

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT +++L  CSE         +H   ++ G    + +C++LV  Y +   +  AR 
Sbjct: 230 KPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARL 289

Query: 130 VFKEMPQKDSVS-----------------------------------FNALITGFAKEGL 154
           VF  MP +D VS                                   +NA+I G  + G 
Sbjct: 290 VFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQ 349

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            E+A+++  +MQ+LGFKP+  T ++ L A   L  + +G++VH +V +   + ++    A
Sbjct: 350 TEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTA 409

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L+ +Y+K   +  +R +F  +   D V++N MI   A +   +E L LF  +  +    +
Sbjct: 410 LVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPN 469

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF 333
              F+ +LS  ++   ++ G QI         +  +      +VD++++ GR  EA E  
Sbjct: 470 SVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFI 529

Query: 334 ANLSHISTV-PWTAMISAYVQKGNLEEA 360
             +    T   W A++ A     N+E A
Sbjct: 530 QRMPMEPTASAWGALLGACRVYKNVELA 557



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 36/314 (11%)

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G F  A+++F N+        + +ISA+  +G   EA+ L+  +    I    + F ++ 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           +A       S  K++H   IR G MS+ F G+AL+  Y K   ++ A + F ++  +++V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC------------- 490
           SW ++ S     G  +  L  F +M  +G +P+SV+L S+L ACS               
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 491 ---GLIEEGL-------QYFNSMTQK-----YKLRPKKE--HYASMVDILCRSGCFDEAE 533
              G+IE           Y   ++ K     + L P ++   +  ++     +  +D+  
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 534 KLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
            L +QM     E DE  W++VI  C  +   E   KA + L KM+ L      + +S+  
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTE---KAVEMLRKMQNLGFKPNQITISSFL 376

Query: 591 AVAGQWESVSQVKK 604
                 ES+   K+
Sbjct: 377 PACSILESLRMGKE 390



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 10/243 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP+++ VS N +++ Y  +        LF+ M    V+    +W  +IGG  +  Q  +A
Sbjct: 294 MPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKA 353

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            ++   M+ + G  P+ +T ++ L  CS  ++     +VH  + +      L    +LV 
Sbjct: 354 VEMLRKMQ-NLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVY 412

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L+L+R VF  + +KD V++N +I   A  G   E + LF  M   G KP+  T
Sbjct: 413 MYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVT 472

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVE---NVFVANALLDLYSKHDCVVEARKLFG 233
           F   LS       +  G Q+   + + + VE   N +    ++D++S+   + EA +   
Sbjct: 473 FTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYA--CMVDVFSRAGRLHEAYEFIQ 530

Query: 234 EMP 236
            MP
Sbjct: 531 RMP 533


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/659 (34%), Positives = 377/659 (57%), Gaps = 2/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L Q+H  ++  G      +   LV+    +  +  AR++F E    D   +NA+I  ++
Sbjct: 71  HLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYS 130

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           +  +  + ++++  M+  G  P  FTF   L A   L D  L   +H  ++K  F  +VF
Sbjct: 131 RNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVF 190

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N L+ LY+K   +  A+ +F  +     VS+  +I+ YA N +  E+L++F +++   
Sbjct: 191 VQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                    ++L    +  DL+ GR IH   I      E  +  SL   YAKCG    AK
Sbjct: 251 VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAK 310

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  +   + + W AMIS Y + G+ EEA+NLF  M   NI  D  T  S + ASA++ 
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVG 370

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL L + +  +V +S + S++F  ++L+DMYAK GS++ A + F    ++++V W+A+I 
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               +G     +  +  M Q+G  P+ V+ + +L+AC+H GL++EG + F+ M + +++ 
Sbjct: 431 GYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIV 489

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ EHY+ +VD+L R+G   EA   + ++P EP   +W +++++C+I++ +   + AA++
Sbjct: 490 PRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANK 549

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF ++   +   YV +SN+YA +  W+ V+ V+  MRE+G+ K   YS +E+  K+  F 
Sbjct: 550 LFSLDPY-NTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFH 608

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D+ HP   EI  +++ L + +K+ G+ P T   LHD + E K E+L +HSER+A+A+ 
Sbjct: 609 VGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYG 668

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+ + + KNLRAC +CH+AIKLISK+  REI VRD++RFHHFKDG CSC D+W
Sbjct: 669 LISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 212/442 (47%), Gaps = 2/442 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++G    G +  AR+LF+         W  +I  YS+ N +R+  +++  MR   G  P
Sbjct: 94  LVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWT-GVHP 152

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  +L  C+E         +H  IIK+G+ S + + N LV  Y K   + +A+ VF
Sbjct: 153 DGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVF 212

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +  +  VS+ ++I+G+A+ G   EA+++F +M++ G KP      + L A   + D+ 
Sbjct: 213 DGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLE 272

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR +H FV+K    +   +  +L   Y+K   V  A+  F +M   + + +N MI+ YA
Sbjct: 273 QGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYA 332

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N   +E++ LF  +             + +   A    L++ + +      +   S++ 
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIF 392

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  SL+DMYAKCG  E A+ +F   S    V W+AMI  Y   G   EA+NL+  M +A 
Sbjct: 393 VNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAG 452

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  +  TF  +L A      +  G +L   +     +      S ++D+  ++G L +A 
Sbjct: 453 VFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512

Query: 432 QTFKEMP-ERNIVSWNALISAC 452
               ++P E  +  W AL+SAC
Sbjct: 513 AFIMKIPIEPGVSVWGALLSAC 534



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G++  A+ +F+ +  RT VSWT +I GY+Q  +  EA ++F  MR +G  
Sbjct: 193 NGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG-V 251

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD++   ++L   ++ D   +   +H  +IK G      +  SL   Y K   + +A+ 
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKS 311

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F +M   + + +NA+I+G+AK G  EEA+ LF  M     KP   T  +A+ A   +  
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + L + +  +V K+N+  ++FV  +L+D+Y+K   V  AR++F    + D V ++ MI  
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + Q  E++ L+  ++      +   F  LL+   +   ++ G ++         +  
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPR 491

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
            +  + +VD+  + G   EA      +     V  W A++SA
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSA 533


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 361/590 (61%), Gaps = 3/590 (0%)

Query: 162 FVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
            ++M  LG +     +   L+  V    I  G++VH  ++KT ++ +V++   L+ LY+K
Sbjct: 78  LLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNK 137

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
            DC+ +AR++F EMP+ + VS+  MI+ Y+      E+L LF E+  +  + + F F+T+
Sbjct: 138 CDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATI 197

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L+     L  + GRQIH+  I     S + V +SL+DMYAK GR  +A  +F  L     
Sbjct: 198 LTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 257

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V  TA+IS Y Q G  EEAL LF ++    ++++  T+AS+L A + LA+L+ GKQ+HS 
Sbjct: 258 VACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSH 317

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           V+RSG  S V   ++L+DMY+K G++  A + F  MPER  +SWNA++   +++G A+  
Sbjct: 318 VLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREV 377

Query: 462 LKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQ-YFNSMTQKYKLRPKKEHYASM 519
           L+ F+ M +    +PDS++ L+VLS CSH  L + GL+ ++N +  K  + P   HY  +
Sbjct: 378 LELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCV 437

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           VD+L R+G  +EA   + +MPF P   +W S++ SCR+H ++E       +L ++E   +
Sbjct: 438 VDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEP-EN 496

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
           A  YV +SN+YA AG+WE +  ++  M+E+ V K    SWVEL   VH F A+D  HP+ 
Sbjct: 497 AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRR 556

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            E+ +K++ L  + K++GY PD SC L+D DEE K + L  HSE+LA+AF LI TPEG+ 
Sbjct: 557 EEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTT 616

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I V+KNLR C DCH+  K +S++  R + +RD +RFH+   G CSC D+W
Sbjct: 617 IRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 224/422 (53%), Gaps = 6/422 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  + T+L+ C       E  +VH  +IK  Y   + +   L+  Y K  CL  A
Sbjct: 85  GREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 144

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R +F EMPQK+ VS+ A+I+ +++ G   EA+ LFVEM     +P+ FTFA  L++  G 
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                GRQ+H+  +K N+  ++FV ++LLD+Y+K   + +A  +F  +PE D V+   +I
Sbjct: 205 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 264

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+LKLFR+LQ    + +   ++++L+ ++    L  G+Q+H+  + +   
Sbjct: 265 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 324

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S V + NSL+DMY+KCG    A+ IF ++   + + W AM+  Y + G   E L LF  M
Sbjct: 325 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 384

Query: 368 CRAN-ISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNVFSGSALLDMYAKS 424
              N +  D  T+ ++L   +      +G ++   ++  + G   ++     ++D+  ++
Sbjct: 385 REENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRA 444

Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           G +++A    K+MP     + W +L+ +C  + D +  +   + +++   +P++     +
Sbjct: 445 GRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVI 502

Query: 484 LS 485
           LS
Sbjct: 503 LS 504



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 190/344 (55%), Gaps = 7/344 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGGSD 70
           LI  Y K   L  ARE+F+ M  +  VSWT +I  YSQ+    EA  LFV+M R+D  ++
Sbjct: 131 LIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSD--TE 188

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P++ TFAT+L+ C          Q+H+  IK  Y S + + +SL+D Y K   +  A  V
Sbjct: 189 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV 248

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +P++D V+  A+I+G+A+ GL+EEA+KLF ++Q  G   +  T+A+ L+A  GLA +
Sbjct: 249 FHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAAL 308

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+QVH+ V+++     V + N+L+D+YSK   V  AR++F  MPE   +S+N M+  Y
Sbjct: 309 NHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGY 368

Query: 251 AWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           + +   +E L+LF+ + +  +       +  +LS  ++     +G +I    +      E
Sbjct: 369 SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIE 428

Query: 310 VKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
             + +   +VD+  + GR EEA +    +  + T   W +++ +
Sbjct: 429 PDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 472



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 54/95 (56%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N LI  Y K GN+  AR +F+SM +RT +SW  ++ GYS+    RE  +LF  MR 
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 386

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
           +    PD +T+  +LSGCS     +  +++  +++
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 421


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/585 (40%), Positives = 346/585 (59%), Gaps = 29/585 (4%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+  G  P+ +TF+A LSA         G Q+H+ V K  F+  VFV +AL+D+Y+K   
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           ++ A K+F EMP +                   E+L    E+           FS++ S 
Sbjct: 61  MLMAEKVFEEMPTL-----------------LLENLTALDEVS----------FSSVFSA 93

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            AN  +L+ G+Q+H   +     + V + NSL DMY KCG F +  ++F+N      V W
Sbjct: 94  CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
             MI AYV   N E+A N F  M R     D+A+++S+L + A LA+L  G  +H+ +IR
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           SGF+ N+   S+L+ MYAK GSL DA Q F+E  +RN+V W A+I+AC Q+G A   ++ 
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           FE M++ G +PD ++ +SVLSACSH G +EEG  YFNSM + + + P  EHYA +VD+L 
Sbjct: 274 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 333

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G  D A++ +  MP +PD  +W +++++CR H NL   K+ A +LF +E   +   YV
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEP-DNPGNYV 392

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            + NI    G      +V++ M   GVRK    SW+++K+  +VFT +D+ H +T EI  
Sbjct: 393 LLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYE 452

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
            +E L + +KK+GY  +T  A+ +  EE K +SL YHSE++A+AF L++ P G+PI + K
Sbjct: 453 MLEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKK 511

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH  +K  S+I  REI VRD +RFHHF +G CSC D+W
Sbjct: 512 NLRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 39/408 (9%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P++ TF+ +LS C++   +    Q+H+ + K G+ + + + ++LVD Y K   + +A
Sbjct: 5   GVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            +VF+EMP     +  AL                            + +F++  SA    
Sbjct: 65  EKVFEEMPTLLLENLTAL---------------------------DEVSFSSVFSACANA 97

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            ++  G+QVH   +K      V++ N+L D+Y K     +  KLF      D V++N+MI
Sbjct: 98  GNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMI 157

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y +N  Y+++   F  ++       +  +S++L   AN   L  G  IH Q I +  +
Sbjct: 158 MAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV 217

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             ++VA+SL+ MYAKCG   +A +IF      + V WTA+I+A  Q G+    + LF +M
Sbjct: 218 KNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQM 277

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG----SALLDMYAK 423
            R  I  D  TF S+L A +    +  G    + +I+   +  ++ G    + ++D+ ++
Sbjct: 278 LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIK---VHGIYPGHEHYACIVDLLSR 334

Query: 424 SGSLKDAIQTFKEMPERNIVS-WNALISACAQNGD----AQATLKSFE 466
           +G L  A +  + MP +   S W AL+SAC  + +     +  LK F+
Sbjct: 335 AGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD 382



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 11/332 (3%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRT---DGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           L+  Y++      A K+F +M T   +  +  D V+F+++ S C+         QVH   
Sbjct: 51  LVDMYAKCCDMLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVA 110

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           +K G  +++ I NSL D Y K    +   ++F     +D V++N +I  +      E+A 
Sbjct: 111 LKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDAC 170

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
             F  M+  G  P + ++++ L +   LA +  G  +H  ++++ FV+N+ VA++L+ +Y
Sbjct: 171 NSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMY 230

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           +K   +V+A ++F E  + + V +  +I     +      ++LF ++           F 
Sbjct: 231 AKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFV 290

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSH 338
           ++LS  ++   ++ G       I    I       + +VD+ ++ G  + AK  F  L  
Sbjct: 291 SVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKR-FIELMP 349

Query: 339 I--STVPWTAMISAYVQKGNL----EEALNLF 364
           I      W A++SA     NL    E AL LF
Sbjct: 350 IKPDASVWGALLSACRNHSNLIMGKEVALKLF 381



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L   Y K G      +LF++   R  V+W I+I  Y   + + +A   F  MR   GS
Sbjct: 123 NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK-GS 181

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  +++++L  C+      +   +H  II+ G+   L + +SL+  Y K   L  A +
Sbjct: 182 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 241

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +F+E   ++ V + A+I    + G     ++LF +M   G KP   TF + LSA
Sbjct: 242 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSA 295



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 19/163 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K G+L  A ++F    DR  V WT +I    Q        +LF  M  + G  P
Sbjct: 226 LITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLRE-GIKP 284

Query: 72  DYVTFATLLSGCSEPDTA-------NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           DY+TF ++LS CS            N +I+VH   I  G+     I    VD   +   L
Sbjct: 285 DYITFVSVLSACSHTGRVEEGFFYFNSMIKVHG--IYPGHEHYACI----VDLLSRAGEL 338

Query: 125 DLARRVFKEMPQK-DSVSFNALITGFAKEG----LNEEAIKLF 162
           D A+R  + MP K D+  + AL++            E A+KLF
Sbjct: 339 DRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 381


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/794 (32%), Positives = 403/794 (50%), Gaps = 92/794 (11%)

Query: 5   NTVSTNMLISGYVKSG----------------NLATARELFNSMVDRTAVSWTILIGGYS 48
           N + + M++SG+ K                  N+  + ++F+ + +        ++ GY 
Sbjct: 43  NQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYM 102

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS--EPDTANELIQVHADIIKFGYNS 106
           Q+N   +A  ++  M     +  +Y T+  L   CS    +   + IQ H  ++K G++S
Sbjct: 103 QRNSPCKAIWVYKFMLESNVAADNY-TYPILFQSCSIRLAEFDGKCIQDH--VLKVGFDS 159

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            + I N+L++ Y     L  AR+VF      D VS+N+++ G+   G  EEA  ++  M 
Sbjct: 160 DVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP 219

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
                                                    NV  +N+++ L+ K   V 
Sbjct: 220 E---------------------------------------RNVIASNSMIVLFGKKGNVE 240

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           EA KLF EM + D VS++ +I+CY  NE Y+E+L LF+E+        +    ++LS  +
Sbjct: 241 EACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACS 300

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA------------------------- 321
             L +  G+ +H   +     + V + N+L+ MY+                         
Sbjct: 301 RLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNS 360

Query: 322 ------KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
                 KCG  E+A+ +F ++     V W+AMIS Y Q+    E L LF EM       D
Sbjct: 361 MISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPD 420

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           +    S++ A   LA+L  GK +H+++ ++G   N+  G+ L++MY K G ++DA++ FK
Sbjct: 421 ETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFK 480

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            + E+ + +WNALI   A NG    +LK+F +M + G  P+ ++ ++VL AC H GL++E
Sbjct: 481 GLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDE 540

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G ++FNSM Q++K+ P  +HY  MVD+L R+G   EAE+L+  MP  PD   W +++ +C
Sbjct: 541 GHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGAC 600

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
           + + + E  ++   +L ++    D    V +SNIYA  G W  V +V+  MR+ GV K  
Sbjct: 601 KKYGDNETGERIGRKLVELHPDHDGFN-VLLSNIYASKGNWVDVLEVRGMMRQHGVVKTP 659

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             S +E   +VH F A D+ HPQ   I   ++ + +++K EGY PDT     D DEE K 
Sbjct: 660 GCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKE 719

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
            +L  HSE+LAIAF LI     +PI ++KNLR C DCH A KLISK   REI VRD  RF
Sbjct: 720 TTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRF 779

Query: 736 HHFKDGFCSCRDFW 749
           HHFK G CSC D+W
Sbjct: 780 HHFKQGSCSCMDYW 793



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 182/391 (46%), Gaps = 34/391 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N +++N +I  + K GN+  A +LFN M  +  VSW+ LI  Y Q   + EA  LF
Sbjct: 218 MPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILF 277

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL------------ 108
            +M  +G    D V   ++LS CS          VH  ++K G  + +            
Sbjct: 278 KEMNANGIM-VDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336

Query: 109 -------------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
                              I  NS++  Y K   ++ AR +F  MP KD+VS++A+I+G+
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A++    E + LF EMQ  G KP +    + +SA   LA +  G+ +HA++ K     N+
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINI 456

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            +   L+++Y K  CV +A ++F  + E    ++N +I   A N    +SLK F E++  
Sbjct: 457 ILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEH 516

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEE 328
               ++  F  +L    +   +  G +     I    I   +K    +VD+  + G  +E
Sbjct: 517 GVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKE 576

Query: 329 AKEIFANLSHISTV-PWTAMISAYVQKGNLE 358
           A+E+  ++     V  W A++ A  + G+ E
Sbjct: 577 AEELIESMPMAPDVSTWGALLGACKKYGDNE 607


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/741 (32%), Positives = 403/741 (54%), Gaps = 8/741 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  +V +G +  A + F  +    A    ++I G++  +   +A   +  M  D G+ P
Sbjct: 60  LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAM-LDAGARP 118

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TF  +L  C+      E    HA +IK G  + +   NSLV  Y K+  +  A RVF
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADI 190
             MP +D VS+N ++ G+   G+   A+  F EM   L          AAL+A    + +
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           ALGR++H + ++    ++V V  +L+D+Y K   V  A  +F +MP    V++N MI  Y
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A NE+  ++   F +++   F         LL+  A       GR +H   +    +  V
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV 358

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            +  +L++MY K G+ E +++IF  ++  + V W  MI+AY+     +EA+ LF+E+   
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQ 418

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D  T  +++ A   L S+   KQ+HS++++ G+  +    +A++ MYA+ G++  +
Sbjct: 419 PLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVAS 478

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F +MP ++++SWN +I   A +G  +  L+ F++M  SG +P+  + +SVL+ACS  
Sbjct: 479 REIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVS 538

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL  EG + FNSM Q+Y + P+ EHY  M D+L R+G   E  + +  MP  P   +W S
Sbjct: 539 GLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGS 598

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ + R   +++ A+ AA+++F++E   +   YV +S++YA AG+WE V +++  M+E+G
Sbjct: 599 LLTASRNKNDIDIAEYAAERIFQLEH-NNTGCYVVLSSMYADAGRWEDVERIRSLMKEKG 657

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           +R+  A S VEL +K   F   D  HPQ+ +I    + L + +   G   D+S  L D D
Sbjct: 658 LRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNI---GEDLDSSSNLRDSD 714

Query: 671 EEIKVESL--KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
                 ++    HS RLA+AF LI++  GSP+LV KN+R C  CH A+KLISK +GR+I 
Sbjct: 715 PFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIV 774

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           V D+  +H F DG C C D+W
Sbjct: 775 VGDTKIYHIFSDGSCCCGDYW 795



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 216/460 (46%), Gaps = 3/460 (0%)

Query: 113 SLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP 172
           SL+ S+     +D A   F  + +  +   N +I GFA   L  +A+  +  M   G +P
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
             FTF   L        +  GR  HA V+K     +V+ AN+L+ LY+K   V +A ++F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQFPFSTLLSVVANKLDL 291
             MP  D VS+N M+  Y  N     +L  FRE+    +           L+    +  L
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            +GR+IH   I      +VKV  SLVDMY KCG    A+ +FA +   + V W  MI  Y
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
                  +A + F++M       +  T  ++L A A+  S   G+ +H++V+R  F+ +V
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV 358

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              +ALL+MY K G ++ + + F ++ ++ +VSWN +I+A       Q  +  F +++  
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQ 418

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
              PD  ++ +V+ A    G I +  Q  +S   K           +++ +  R G    
Sbjct: 419 PLYPDYFTMTTVVPAFVLLGSIRQCKQ-MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVA 477

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           + ++  +MP + D I W+++I    IH   + A +  D++
Sbjct: 478 SREIFDKMPGK-DVISWNTIIIGYAIHGQGKIALEMFDEM 516



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 2/455 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +  + N L++ Y K G +  A  +F+ M  R  VSW  ++ GY        A   F +M 
Sbjct: 154 DVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMN 213

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                  D V     L+ C          ++H   I+ G    + +  SLVD YCK   +
Sbjct: 214 DALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNV 273

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF +MP +  V++N +I G+A      +A   F++M+  GF+    T    L+A 
Sbjct: 274 FFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTAC 333

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                   GR VHA+VV+ +F+ +V +  ALL++Y K   V  + K+FG++ +   VS+N
Sbjct: 334 AQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWN 393

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y + E Y+E++ LF EL         F  +T++        ++  +Q+H+  +  
Sbjct: 394 NMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKL 453

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                  + N+++ MYA+CG    ++EIF  +     + W  +I  Y   G  + AL +F
Sbjct: 454 GYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMF 513

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            EM  + +  +++TF S+L A +     + G K+ +S     G +  +     + D+  +
Sbjct: 514 DEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGR 573

Query: 424 SGSLKDAIQTFKEMPERNIVS-WNALISACAQNGD 457
           +G L++ ++  + MP       W +L++A     D
Sbjct: 574 AGELREVLRFIENMPIAPTSRIWGSLLTASRNKND 608


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/600 (36%), Positives = 342/600 (57%), Gaps = 3/600 (0%)

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           ++ G    A+++F  +     +P   TF  ALSA   L D+  G  V        + ++V
Sbjct: 85  SRRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV ++LL LY++   + +A K+F  MP  D V+++ M+  +    Q  ++++++R ++  
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                +     ++       ++++G  +H   +      +V  A SLVDMYAK G  + A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  + H + V W+AMIS + Q G  +EAL LF  M  + I  D     S L A + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
             L LG+ +H F++R  F  N   G+A +DMY+K GSL  A   F  + +R+++ WNA+I
Sbjct: 324 GFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMI 382

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           + C  +G  Q  L  F++M ++G +PD  +  S+LSA SH GL+EEG  +F  M   +K+
Sbjct: 383 ACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKI 442

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P ++HY  +VD+L RSG  +EA  L+  M  EP   +W ++++ C  +K LE  +  AD
Sbjct: 443 TPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIAD 502

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            + +++   D      +SN+YA   +W+ V QV+K M++ G +K+   S +E++   H F
Sbjct: 503 NILELQP-DDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAF 561

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D+ HPQ  EI  K+  L  EM+K GY P T    HD +EE+K + L YHSE+LAIAF
Sbjct: 562 LMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAF 621

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L+NT  G+ ++++KNLR C DCH AIK ISKI  REI VRD+ RFHHFKDG CSCRD+W
Sbjct: 622 GLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 179/349 (51%), Gaps = 4/349 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y + G +  A ++F+ M  R  V+W+ ++ G+    Q  +A +++  MR DG    
Sbjct: 149 LLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKG 207

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V    ++  C+          VH  +++ G    ++   SLVD Y K   LD+A RVF
Sbjct: 208 DEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVF 267

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             M  ++ VS++A+I+GFA+ G ++EA++LF  MQ  G +P      +AL A   +  + 
Sbjct: 268 GLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLK 327

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR VH F+V+  F  N  +  A +D+YSK   +  A+ LF  + + D + +N MI C  
Sbjct: 328 LGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCG 386

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV- 310
            + + +++L LF+E+  T        F++LLS +++   ++ G+      +    I+   
Sbjct: 387 AHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAE 446

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           K    LVD+ A+ G  EEA ++  ++    TV  W A++S  +    LE
Sbjct: 447 KHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 113/237 (47%), Gaps = 13/237 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K+G L  A  +F  MV R  VSW+ +I G++Q  Q  EA +LF +M+
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKIRC 123
              G  PD     + L  CS          VH  I+ +F +N IL    + +D Y K   
Sbjct: 303 AS-GIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCIL--GTAAIDMYSKCGS 359

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A+ +F  +  +D + +NA+I      G  ++A+ LF EM   G +P   TFA+ LSA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419

Query: 184 --GVGLAD---IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
               GL +   +  G  V+ F  K    E  +V   L+DL ++   V EA  L   M
Sbjct: 420 LSHSGLVEEGKLWFGCMVNHF--KITPAEKHYV--CLVDLLARSGLVEEASDLLTSM 472


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 398/742 (53%), Gaps = 61/742 (8%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+  D+ T   +L  C E  +       H  I   G+ S + ICN+LV  Y +   L+ A
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 128 RRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF-KPSD-----FTFA 178
             +F E+ Q+   D +S+N++++   K      A+ LF +M  +   KP++      +  
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             L A   L  +   ++VH   ++     +VFV NAL+D Y+K   +  A K+F  M   
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184

Query: 239 DGVSYNVMITCYAWNEQYK-----------------------------------ESLKLF 263
           D VS+N M+  Y+ +  +K                                   E+L +F
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS----------EVKVA 313
           R++ F+    +     ++LS  A+      G +IH  ++    ++          ++ V 
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304

Query: 314 NSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA- 370
           N+L+DMY+KC  F+ A+ IF +  L   + V WT MI  + Q G+  +AL LF+EM    
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364

Query: 371 -NISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSALLDMYAKSGSL 427
             ++ +  T + IL A A LA++ +GKQ+H++V+R      S  F  + L++MY+K G +
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDV 424

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F  M +++ +SW ++++    +G     L  F+ M ++G+ PD ++ L VL AC
Sbjct: 425 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 484

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SHCG++++GL YF+SM+  Y L P+ EHYA  +D+L R G  D+A K +  MP EP  ++
Sbjct: 485 SHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV 544

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++CR+H N+E A+ A ++L +M    D + Y  +SNIYA AG+W+ V++++  M+
Sbjct: 545 WVALLSACRVHSNVELAEHALNKLVEMNAENDGS-YTLISNIYATAGRWKDVARIRHLMK 603

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           + G++K    SWV+ +     F   D  HP + +I   +E+L+  +K  GY P+T+ ALH
Sbjct: 604 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 663

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE K   L  HSE+LA+A+ L+ T  G PI + KNLR C DCH+A   ISKI   EI
Sbjct: 664 DVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 723

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD SRFHHFK+G CSC  +W
Sbjct: 724 VVRDPSRFHHFKNGSCSCGGYW 745



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 248/544 (45%), Gaps = 62/544 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRT---AVSWTILIGGYSQKNQFREAFKLFV 61
           N    N L++ Y + G+L  A  +F+ +  R     +SW  ++  + + +    A  LF 
Sbjct: 44  NVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFS 103

Query: 62  DMRTDGGSDP-----DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
            M       P     D ++   +L  C       +  +VH + I+ G    + + N+L+D
Sbjct: 104 KMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALID 163

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNAL------------------------------- 145
           +Y K   ++ A +VF  M  KD VS+NA+                               
Sbjct: 164 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVT 223

Query: 146 ----ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
               I G+++ G + EA+ +F +M   G  P+  T  + LSA   L   + G ++HA+ +
Sbjct: 224 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 283

Query: 202 KTNFV----------ENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITC 249
           K   +          E++ V NAL+D+YSK      AR +F ++P  E + V++ VMI  
Sbjct: 284 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 343

Query: 250 YAWNEQYKESLKLFRELQFTRFD--RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +A      ++LKLF E+    +    + +  S +L   A+   ++IG+QIH   +     
Sbjct: 344 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY 403

Query: 308 --SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S   VAN L++MY+KCG  + A+ +F ++S  S + WT+M++ Y   G   EAL++F 
Sbjct: 404 DSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 463

Query: 366 EMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           +M +A    D  TF  +L A +    +  G     S     G        +  +D+ A+ 
Sbjct: 464 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARF 523

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD-SVSLLS 482
           G L  A +T K+MP E   V W AL+SAC  + + +    +   +V+   + D S +L+S
Sbjct: 524 GRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 583

Query: 483 VLSA 486
            + A
Sbjct: 584 NIYA 587



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 203/392 (51%), Gaps = 26/392 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M  ++ VS N +++GY +SGN   A ELF +M    +    V+WT +I GYSQ+    EA
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK----------FGYNS 106
             +F  M    GS P+ VT  ++LS C+     ++ +++HA  +K           G + 
Sbjct: 241 LNVFRQM-IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVE 164
            L++ N+L+D Y K R    AR +F ++P  +++ V++  +I G A+ G + +A+KLFVE
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 165 M--QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN--VFVANALLDLYS 220
           M  +  G  P+ +T +  L A   LA I +G+Q+HA+V++ +  ++   FVAN L+++YS
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   V  AR +F  M +   +S+  M+T Y  + +  E+L +F +++   F      F  
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           +L   ++   +  G            ++   +     +D+ A+ GR ++A +   ++   
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 340 ST-VPWTAMISAYVQKGNL---EEALNLFIEM 367
            T V W A++SA     N+   E ALN  +EM
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEM 571



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 207/471 (43%), Gaps = 63/471 (13%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M   G +   FT    L A   L     G   H  +    F  NVF+ NAL+ +YS+   
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 225 VVEARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
           + EA  +F E+ +    D +S+N +++ +  +     +L LF ++     ++     S +
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 282 LSVV------ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           +S+V       +   +   +++H   I      +V V N+L+D YAKCG  E A ++F  
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA--------------- 380
           +     V W AM++ Y Q GN + A  LF  M + NI  D  T+                
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 381 --------------------SILRASAELASLSLGKQLHSFVIRSGFMS--NVFSG---- 414
                               S+L A A L + S G ++H++ +++  ++  N F G    
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 415 ----SALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDM 468
               +AL+DMY+K  S K A   F ++P  ERN+V+W  +I   AQ GD+   LK F +M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 469 VQSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCR 525
           +   Y   P++ ++  +L AC+H   I  G Q    + + ++        A+ ++++  +
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
            G  D A  +   M  +   I W+S++    +H       +A D   KM K
Sbjct: 421 CGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGR---GSEALDIFDKMRK 467


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/586 (39%), Positives = 355/586 (60%), Gaps = 2/586 (0%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+  G  P+ FTF++ LSA      +  G+Q+H+ + K  F  N+FV  AL+D+Y+K   
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLS 283
           +  A ++F +MPE + VS+N MI  +  N  Y  ++ +F++ L+      ++   S++LS
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             AN   L  GRQ+H   +    +    V NSL+DMY KC  F+E  ++F  +     V 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W  ++  +VQ    EEA N F  M R  I  D+A+F+++L +SA LA+L  G  +H  +I
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           + G++ N+    +L+ MYAK GSL DA Q F+ + + N++SW A+ISA   +G A   ++
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            FE M+  G +P  V+ + VLSACSH G +EEGL +FNSM + + + P  EHYA MVD+L
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            R+G  DEA++ +  MP +P   +W +++ +CR + NL+  ++AA++LF+ME   +   Y
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY-NPGNY 419

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
           V ++N+   +G+ E  ++V++ M   GVRK    SW+++K+   VFTA+D  H  ++EI 
Sbjct: 420 VLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIY 479

Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
           + +E L + +KK+GY  +T    +  +E  + + L YHSE+LA+AF L+  P  SPI + 
Sbjct: 480 KMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIK 539

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KNLR C  CH  +KL SKI  REI VRD +RFH F DGFCSC D+W
Sbjct: 540 KNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 217/432 (50%), Gaps = 6/432 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+  TF+++LS  +         Q+H+ I K G+++ + +  +LVD Y K   +  A
Sbjct: 5   GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGVG 186
            RVF +MP+++ VS+N++I GF    L + A+ +F + ++     P++ + ++ LSA   
Sbjct: 65  VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +  +  GRQVH  VVK   V   +V N+L+D+Y K     E  KLF  + + D V++NV+
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  +  N++++E+   F  ++       +  FST+L   A+   L  G  IH Q I    
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +  + +  SL+ MYAKCG   +A ++F  +   + + WTAMISAY   G   + + LF  
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEH 304

Query: 367 MCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M    I     TF  +L A +    +  G    +S              + ++D+  ++G
Sbjct: 305 MLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAG 364

Query: 426 SLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
            L +A +  + MP +   S W AL+ AC + G+ +   ++ E + +   Y P +  LL+ 
Sbjct: 365 WLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLA- 423

Query: 484 LSACSHCGLIEE 495
            + C+  G +EE
Sbjct: 424 -NMCTRSGRLEE 434



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 181/376 (48%), Gaps = 17/376 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      L+  Y K  ++ +A  +F+ M +R  VSW  +I G+   N +  A  +F D
Sbjct: 42  DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 101

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +    P+ V+ +++LS C+     N   QVH  ++KFG   +  + NSL+D Y K R
Sbjct: 102 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCR 161

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             D   ++F+ +  +D V++N L+ GF +    EEA   F  M+  G  P + +F+  L 
Sbjct: 162 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 221

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   LA +  G  +H  ++K  +V+N+ +  +L+ +Y+K   +V+A ++F  + + + +S
Sbjct: 222 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 281

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-------R 295
           +  MI+ Y  +    + ++LF  +     + S   F  +LS  ++   ++ G       +
Sbjct: 282 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMK 341

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQK 354
           +IH         +       +VD+  + G  +EAK    ++    T   W A++ A  + 
Sbjct: 342 KIHDMNPGPEHYA------CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKY 395

Query: 355 GNLE---EALNLFIEM 367
           GNL+   EA     EM
Sbjct: 396 GNLKMGREAAERLFEM 411



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      LI+ Y K G+L  A ++F  + D   +SWT +I  Y       +  +LF  M
Sbjct: 246 KNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHM 305

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKI 121
            ++ G +P +VTF  +LS CS      E +  H + +K     N        +VD   + 
Sbjct: 306 LSE-GIEPSHVTFVCVLSACSHTGRVEEGL-AHFNSMKKIHDMNPGPEHYACMVDLLGRA 363

Query: 122 RCLDLARRVFKEMPQKDSVS-FNALITGFAKEG---LNEEAIKLFVEMQHLGFKPSDFTF 177
             LD A+R  + MP K + S + AL+    K G   +  EA +   EM+   + P ++  
Sbjct: 364 GWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME--PYNPGNYVL 421

Query: 178 AAALSAGVG 186
            A +    G
Sbjct: 422 LANMCTRSG 430


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/738 (34%), Positives = 401/738 (54%), Gaps = 7/738 (0%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM---RTD 66
            N L+S Y   G +  A +LF+ M +R  VSW  +I  +S      E+F L  +M     D
Sbjct: 581  NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 640

Query: 67   GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G   PD  T  T+L  C+          VH   +K   +  L++ N+L+D Y K  C+  
Sbjct: 641  GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 700

Query: 127  ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAG 184
            A+ +FK    K+ VS+N ++ GF+ EG       +  +M   G   K  + T   A+   
Sbjct: 701  AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 760

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               + +   +++H + +K  FV N  VANA +  Y+K   +  A+++F  +      S+N
Sbjct: 761  FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 820

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             +I  +A +   + SL    +++ +      F   +LLS  +    L++G+++H   I  
Sbjct: 821  ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 880

Query: 305  TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                ++ V  S++ +Y  CG     + +F  +   S V W  +I+ Y+Q G  + AL +F
Sbjct: 881  WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 940

Query: 365  IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             +M    I     +   +  A + L SL LG++ H++ ++     + F   +L+DMYAK+
Sbjct: 941  RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 1000

Query: 425  GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            GS+  + + F  + E++  SWNA+I     +G A+  +K FE+M ++G+ PD ++ L VL
Sbjct: 1001 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 1060

Query: 485  SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA-QMPFEP 543
            +AC+H GLI EGL+Y + M   + L+P  +HYA ++D+L R+G  D+A +++A +M  E 
Sbjct: 1061 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 1120

Query: 544  DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
            D  +W S+++SCRIH+NLE  +K A +LF++E  +    YV +SN+YA  G+WE V +V+
Sbjct: 1121 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK-PENYVLLSNLYAGLGKWEDVRKVR 1179

Query: 604  KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            + M E  +RK    SW+EL  KV  F   +       EI+     L  ++ K GY+PDT 
Sbjct: 1180 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 1239

Query: 664  CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
               HD  EE K+E L+ HSE+LA+ + LI T EG+ I V KNLR C DCH A KLISK+ 
Sbjct: 1240 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 1299

Query: 724  GREITVRDSSRFHHFKDG 741
             REI VRD+ RFHHFK+G
Sbjct: 1300 EREIVVRDNKRFHHFKNG 1317



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 273/580 (47%), Gaps = 12/580 (2%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            N + + T  +I+ Y   G+   +R +F+++  +    W  +I  YS+   + E  + F++
Sbjct: 473  NDDVLCTR-IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 531

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            M +     PD+ T+  ++  C+        + VH  ++K G    + + N+LV  Y    
Sbjct: 532  MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 591

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFTFA 178
             +  A ++F  MP+++ VS+N++I  F+  G +EE+  L  EM        F P   T  
Sbjct: 592  FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 651

Query: 179  AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
              L       +I LG+ VH + VK    + + + NAL+D+YSK  C+  A+ +F      
Sbjct: 652  TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 711

Query: 239  DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL--LSVVANKLDLQIGRQ 296
            + VS+N M+  ++       +  + R++     D      + L  + V  ++  L   ++
Sbjct: 712  NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 771

Query: 297  IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
            +H  ++    +    VAN+ V  YAKCG    A+ +F  +   +   W A+I  + Q  +
Sbjct: 772  LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 831

Query: 357  LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
               +L+  ++M  + +  D  T  S+L A ++L SL LGK++H F+IR+    ++F   +
Sbjct: 832  PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 891

Query: 417  LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
            +L +Y   G L      F  M ++++VSWN +I+   QNG     L  F  MV  G Q  
Sbjct: 892  VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 951

Query: 477  SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             +S++ V  ACS    +  G +  ++   K+ L        S++D+  ++G   ++ K+ 
Sbjct: 952  GISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 1010

Query: 537  AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
              +  E     W+++I    IH     AK+A     +M++
Sbjct: 1011 NGLK-EKSTASWNAMIMGYGIHG---LAKEAIKLFEEMQR 1046



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 211/457 (46%), Gaps = 10/457 (2%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            ++  V  N L+  Y K G +  A+ +F    ++  VSW  ++GG+S +      F +   
Sbjct: 679  DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 738

Query: 63   MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
            M   GG D   D VT    +  C        L ++H   +K  F YN   ++ N+ V SY
Sbjct: 739  MLA-GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--LVANAFVASY 795

Query: 119  CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
             K   L  A+RVF  +  K   S+NALI G A+      ++   ++M+  G  P  FT  
Sbjct: 796  AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 855

Query: 179  AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            + LSA   L  + LG++VH F+++     ++FV  ++L LY     +   + LF  M + 
Sbjct: 856  SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 915

Query: 239  DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
              VS+N +IT Y  N     +L +FR++              +    +    L++GR+ H
Sbjct: 916  SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 975

Query: 299  TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
               +      +  +A SL+DMYAK G   ++ ++F  L   ST  W AMI  Y   G  +
Sbjct: 976  AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 1035

Query: 359  EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
            EA+ LF EM R   + D  TF  +L A      +  G + L       G   N+   + +
Sbjct: 1036 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 1095

Query: 418  LDMYAKSGSLKDAIQTF-KEMPERNIVS-WNALISAC 452
            +DM  ++G L  A++   +EM E   V  W +L+S+C
Sbjct: 1096 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 1132



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
            N +  N  ++ Y K G+L+ A+ +F+ +  +T  SW  LIGG++Q N  R +    + M+
Sbjct: 784  NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 843

Query: 65   TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
               G  PD  T  +LLS CS+  +     +VH  II+      L +  S++  Y     L
Sbjct: 844  IS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 902

Query: 125  DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
               + +F  M  K  VS+N +ITG+ + G  + A+ +F +M   G +    +      A 
Sbjct: 903  CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 962

Query: 185  VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              L  + LGR+ HA+ +K    ++ F+A +L+D+Y+K+  + ++ K+F  + E    S+N
Sbjct: 963  SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 1022

Query: 245  VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             MI  Y  +   KE++KLF E+Q T  +     F  +L+   +   +  G +   Q   +
Sbjct: 1023 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 1082

Query: 305  TAI-SEVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVP-WTAMISAYVQKGNLE 358
              +   +K    ++DM  + G+ ++A  + A  +S  + V  W +++S+     NLE
Sbjct: 1083 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 1139



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 148/280 (52%), Gaps = 8/280 (2%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHI 339
           LL     + D+++GR+IH     +T +    V    ++ MYA CG  ++++ +F  L   
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
           +   W A+IS+Y +    +E L  FIEM    ++  D  T+  +++A A ++ + +G  +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  V+++G + +VF G+AL+  Y   G + DA+Q F  MPERN+VSWN++I   + NG +
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 459 QATLKSFEDMVQ----SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           + +     +M++      + PD  +L++VL  C+    I  G +  +    K +L  +  
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELV 683

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              +++D+  + GC   A+ ++ +M    + + W++++  
Sbjct: 684 LNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGG 722


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/552 (38%), Positives = 338/552 (61%), Gaps = 6/552 (1%)

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           ++   F  + ++ N +L ++ K   +++AR+LF EMPE + VS+N +I+       + E+
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +LF  +     D   F F+ ++   A    + IGRQ+H  T+      ++ V+ +L+DM
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KCG  E+A+ +F  +   +TV W  +I+ Y   G  EEAL+++ EM  + +  D  TF
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           + I+R  A LAS+   KQ H+ +IR GF S++ + +AL+D Y+K G ++DA   F +M  
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           +N++SWNALI     +G     ++ FE M+Q    P+ ++ L+VLSACSH GL E G + 
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F SM +  +++P+  HYA M++++ R G  DEA  L+   PF+P   MW++++ +CR+++
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNE 360

Query: 560 NLEFAKKAADQLFKME--KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           N E  K AA++L+ ME  KL +   Y+ + NIY  AG  +  + V   ++ +G+R     
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNN---YIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVC 417

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW+E+K + HVF + D  HPQ  EI +K++ LM E+ K GY P+    L D DE+ +   
Sbjct: 418 SWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVR 477

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           L YHSE+LAIAF LI+TP  +P+ +++  R C DCH AIKLI+++TGREI +RD+ RFHH
Sbjct: 478 L-YHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHH 536

Query: 738 FKDGFCSCRDFW 749
           FK G CSC D+W
Sbjct: 537 FKHGHCSCEDYW 548



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 204/389 (52%), Gaps = 6/389 (1%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F EMP+++ VS+N +I+G    G   EA +LF+ M         FTFA  + A  G
Sbjct: 29  ARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAG 88

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L  I++GRQ+HA  +K    +++FV+ AL+D+YSK   + +AR +F EMPE   V +N +
Sbjct: 89  LELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTI 148

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA +   +E+L ++ E++ +      F FS ++ + A    ++  +Q H   I    
Sbjct: 149 IAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGF 208

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++    +LVD Y+K GR E+A+ +F  ++  + + W A+I  Y   G   EA+ LF +
Sbjct: 209 GSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQ 268

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSG 425
           M +  ++ +  TF ++L A +       G ++   + R   +       + ++++  + G
Sbjct: 269 MIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREG 328

Query: 426 SLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSV-SLLSV 483
            L +A+   +  P +   + W AL++AC  N + +  L  F      G +PD + + + +
Sbjct: 329 LLDEALALIRGAPFKPTANMWAALLTACRVNENFE--LGKFAAEKLYGMEPDKLNNYIVL 386

Query: 484 LSACSHCGLIEEGLQYFNSMTQK-YKLRP 511
           L+  +  G ++E     +++ +K  ++RP
Sbjct: 387 LNIYNSAGNLKEAADVVHTLKRKGLRMRP 415



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 213/443 (48%), Gaps = 44/443 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR LF+ M +R  VSW  +I G      F EAF+LF++M  +  S
Sbjct: 14  NRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEF-S 72

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D    TFA ++   +  +  +   Q+HA  +K G    + +  +L+D Y K   ++ AR 
Sbjct: 73  DAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARF 132

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF+EMP+K +V +N +I G+A  G +EEA+ ++ EM+  G K   FTF+  +     LA 
Sbjct: 133 VFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLAS 192

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +Q HA +++  F  ++    AL+D YSK   + +AR +F +M   + +S+N +I  
Sbjct: 193 VEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGG 252

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + +  E+++LF ++   R + +   F  +LS  ++    + G +I         I  
Sbjct: 253 YGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKP 312

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEM 367
             +  + ++++  + G  +EA  +        T   W A+++A                 
Sbjct: 313 RAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTA----------------- 355

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           CR N + +   F     A+ +L  +   K L+++++             LL++Y  +G+L
Sbjct: 356 CRVNENFELGKF-----AAEKLYGMEPDK-LNNYIV-------------LLNIYNSAGNL 396

Query: 428 K---DAIQTFKE--MPERNIVSW 445
           K   D + T K   +  R + SW
Sbjct: 397 KEAADVVHTLKRKGLRMRPVCSW 419



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 34/179 (18%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+   L+  Y K G +  AR +F+ M  +  +SW  LIGGY    +  EA +LF  M 
Sbjct: 211 DIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMI 270

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +   +P+++TF  +LS CS           H+ + + G+    I  +   D+  K R +
Sbjct: 271 QE-RMNPNHITFLAVLSACS-----------HSGLSERGWE---IFQSMGRDNRIKPRAM 315

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             A                 +I    +EGL +EA+ L   ++   FKP+   +AA L+A
Sbjct: 316 HYA----------------CMIELMGREGLLDEALAL---IRGAPFKPTANMWAALLTA 355


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 360/590 (61%), Gaps = 3/590 (0%)

Query: 162 FVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
            ++M  LG +     + + L+  V    I  G++VH  ++KT ++ +V++   L+ LY+K
Sbjct: 50  LLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNK 109

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
            DC+ +AR +F EMP+ + VS+  MI+ Y+      E+L LF E+  +  + + F F+T+
Sbjct: 110 CDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATI 169

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L+     L  + GRQIH+  I     S + V +SL+DMYAK GR  +A  +F  L     
Sbjct: 170 LTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 229

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           V  TA+IS Y Q G  EEAL LF ++    ++++  T+AS+L A + LA+L+ GKQ+HS 
Sbjct: 230 VACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSH 289

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           V+RSG  S V   ++L+DMY+K G++  A + F  MPER  +SWNA++   +++G A+  
Sbjct: 290 VLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREV 349

Query: 462 LKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQ-YFNSMTQKYKLRPKKEHYASM 519
           L+ F+ M +    +PDS++ L+VLS CSH  L + GL+ ++N +  K  + P   HY  +
Sbjct: 350 LELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCV 409

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           VD+L R+G  +EA   + +MPF P   +W S++ SCR+H ++E       +L ++E   +
Sbjct: 410 VDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEP-EN 468

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
           A  YV +SN+YA AG+WE +  ++  M+E+ V K    SWVEL   VH F A+D  HP+ 
Sbjct: 469 AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRR 528

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            E+  K++ L  + K++GY PD SC L+D DEE K + L  HSE+LA+AF LI TPEG+ 
Sbjct: 529 EEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTT 588

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I V+KNLR C DCH+  K +S++  R + +RD +RFH+   G CSC D+W
Sbjct: 589 IRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 224/422 (53%), Gaps = 6/422 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  + ++L+ C       E  +VH  +IK  Y   + +   L+  Y K  CL  A
Sbjct: 57  GREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 116

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R +F EMPQ++ VS+ A+I+ +++ G   EA+ LFVEM     +P+ FTFA  L++  G 
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                GRQ+H+  +K N+  ++FV ++LLD+Y+K   + +A  +F  +PE D V+   +I
Sbjct: 177 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+LKLFR+LQ    + +   ++++L+ ++    L  G+Q+H+  + +   
Sbjct: 237 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 296

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S V + NSL+DMY+KCG    A+ IF ++   + + W AM+  Y + G   E L LF  M
Sbjct: 297 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 356

Query: 368 CRAN-ISADQATFASILRASAELASLSLGKQLHSFVI--RSGFMSNVFSGSALLDMYAKS 424
              N +  D  T+ ++L   +      +G ++   ++  + G   ++     ++D+  ++
Sbjct: 357 REENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRA 416

Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           G +++A    K+MP     + W +L+ +C  + D +  +   + +++   +P++     +
Sbjct: 417 GRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVI 474

Query: 484 LS 485
           LS
Sbjct: 475 LS 476



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGGSD 70
           LI  Y K   L  AR +F+ M  R  VSWT +I  YSQ+    EA  LFV+M R+D  ++
Sbjct: 103 LIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSD--TE 160

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P++ TFAT+L+ C          Q+H+  IK  Y S + + +SL+D Y K   +  A  V
Sbjct: 161 PNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGV 220

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +P++D V+  A+I+G+A+ GL+EEA+KLF ++Q  G   +  T+A+ L+A  GLA +
Sbjct: 221 FHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAAL 280

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+QVH+ V+++     V + N+L+D+YSK   V  AR++F  MPE   +S+N M+  Y
Sbjct: 281 NHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGY 340

Query: 251 AWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           + +   +E L+LF+ + +  +       +  +LS  ++     +G +I    +      E
Sbjct: 341 SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIE 400

Query: 310 VKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
             + +   +VD+  + GR EEA +    +  + T   W +++ +
Sbjct: 401 PDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 444



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 54/95 (56%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N LI  Y K GN+  AR +F+SM +RT +SW  ++ GYS+    RE  +LF  MR 
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 358

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
           +    PD +T+  +LSGCS     +  +++  +++
Sbjct: 359 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMV 393


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/666 (36%), Positives = 377/666 (56%), Gaps = 27/666 (4%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  PD+  F ++L  C+          VH  II+ G    L  CN+L++ Y K       
Sbjct: 5   GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK------- 57

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV-G 186
                         F +L  G  +   + + +    E + +G   +       L   V G
Sbjct: 58  --------------FWSLEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAG 103

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD----CVVEARKLFGEMPEVDGVS 242
           +       Q+   + + N  + VF      D+YSK +     +   RK+F  MP+ D VS
Sbjct: 104 IDQNGDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 163

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I+  A N  ++++L + RE+         F  S++L + A  ++L  G++IH   I
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                ++V + +SL+DMYAKC R +++  +F  L     + W ++I+  VQ G  +E L 
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            F +M  A I  +  +F+SI+ A A L +L LGKQLH ++IRS F  NVF  SAL+DMYA
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G+++ A   F +M   ++VSW A+I   A +G A   +  F+ M   G +P+ V+ ++
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+ACSH GL++E  +YFNSMTQ Y++ P  EHYA++ D+L R G  +EA + ++ M  E
Sbjct: 404 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 463

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P   +WS+++ +CR+HKN+E A+K + +LF ++  ++   YV +SNIY+ AG+W+   ++
Sbjct: 464 PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDP-QNIGAYVLLSNIYSAAGRWKDARKL 522

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           + AMR++G++K  A SW+E+K+KVH F A D+ HP  + I   ++ L+++M++EGY  DT
Sbjct: 523 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 582

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           +  LHD +EE K   L  HSERLAI F +I+TP G+ I V KNLR C DCH A K ISKI
Sbjct: 583 TEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKI 642

Query: 723 TGREIT 728
            GREI 
Sbjct: 643 VGREIV 648



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 183/344 (53%), Gaps = 9/344 (2%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTFATL 79
           L + R++F  M  R  VSW  +I G +Q     +A  +  +M   G +D  PD  T +++
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM---GNADLRPDSFTLSSV 202

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L   +E     +  ++H   I+ GY++ + I +SL+D Y K   +D + RVF  +PQ D 
Sbjct: 203 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDG 262

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           +S+N++I G  + G+ +E +K F +M     KP+  +F++ + A   L  + LG+Q+H +
Sbjct: 263 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 322

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           ++++ F  NVF+A+AL+D+Y+K   +  AR +F +M   D VS+  MI  YA +    ++
Sbjct: 323 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 382

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           + LF+ ++      +   F  +L+  ++  L  +  +  ++ T     I  ++   ++ D
Sbjct: 383 ISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 442

Query: 319 MYAKCGRFEEAKEIFANLSHISTVP--WTAMISAYVQKGNLEEA 360
           +  + GR EEA E  +++ HI      W+ +++A     N+E A
Sbjct: 443 LLGRVGRLEEAYEFISDM-HIEPTGSVWSTLLAACRVHKNIELA 485



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 3/182 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   +  +  +F  +     +SW  +I G  Q   F E  K F  M       P
Sbjct: 237 LIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI-AKIKP 295

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++V+F++++  C+   T +   Q+H  II+  ++  + I ++LVD Y K   +  AR +F
Sbjct: 296 NHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIF 355

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
            +M   D VS+ A+I G+A  G   +AI LF  M+  G KP+   F A L+A    GL D
Sbjct: 356 DKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 415

Query: 190 IA 191
            A
Sbjct: 416 EA 417



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K GN+ TAR +F+ M     VSWT +I GY+      +A  LF  
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  + G  P+YV F  +L+ CS     +E
Sbjct: 389 MEVE-GVKPNYVAFMAVLTACSHAGLVDE 416


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/674 (36%), Positives = 378/674 (56%), Gaps = 12/674 (1%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNS---LVDSYCKIRCLDLARRVFKEMP 135
           L++   EP  A    ++HA +I  G   I    NS   L+ SY ++  ++ AR+VF + P
Sbjct: 14  LITSKDEPTIA----KIHALMILTG---IFGHGNSNAKLIQSYARLGHIESARQVFDKSP 66

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q    ++NA+I  +++ G   EA+ L+  M   G +P   T+   L A     D+  G +
Sbjct: 67  QCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEE 126

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
                V   + ++VFV  A+L+LY+K   + EA ++F +M   D V +  MIT  A N Q
Sbjct: 127 TWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQ 186

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            +E++ ++R++   R +        L+         ++G  IH   I    I +V V  S
Sbjct: 187 AREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTS 246

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMYAK G  E A  +F  + + + + W+A+IS + Q G    AL L ++M       D
Sbjct: 247 LVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPD 306

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             +  S+L A +++  L LGK +H +++R     +  S +A++DMY+K GSL  A   F 
Sbjct: 307 SVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFD 365

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           ++  R+ +SWNA+I++   +G  +  L  F  M ++  +PD  +  S+LSA SH GL+E+
Sbjct: 366 QISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEK 425

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G  +F+ M  +YK++P ++HYA MVD+L R+G  +EA++L+  M  EP   +W ++++ C
Sbjct: 426 GRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGC 485

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
             H      + AA ++ ++    D   Y  +SN +A A +W+ V++V+K M++ G++KV 
Sbjct: 486 LNHGKFLIGEMAAKKVLELNP-DDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVP 544

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
            YS +E+  K+H F   D+ H Q  EI + +  L  EMK  GY P T   LH+ +EE+K 
Sbjct: 545 GYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKE 604

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
             L  HSERLAIAF L+NT  G+ +L+ KNLR C DCH A K ISKI  REI VRD  RF
Sbjct: 605 RMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRF 664

Query: 736 HHFKDGFCSCRDFW 749
           HHFKDG CSC D+W
Sbjct: 665 HHFKDGVCSCGDYW 678



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 225/451 (49%), Gaps = 4/451 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   LI  Y + G++ +AR++F+        +W  +I  YS++    EA  L+  M ++ 
Sbjct: 41  SNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASE- 99

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  PD  T+  +L  C+         +     +  GY   + +  ++++ Y K   +D A
Sbjct: 100 GVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEA 159

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            RVF +M ++D V +  +ITG A+ G   EA+ ++ +M     +         + A   L
Sbjct: 160 MRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTL 219

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
               +G  +H ++++ + + +V V  +L+D+Y+K+  +  A  +F  M   + +S++ +I
Sbjct: 220 GHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALI 279

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + +A N     +L+L  ++Q   +        ++L   +    L++G+ +H   IV    
Sbjct: 280 SGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGY-IVRRLH 338

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +   + +++DMY+KCG    A+ +F  +S   ++ W A+I++Y   G+ EEAL+LF++M
Sbjct: 339 FDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQM 398

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGS 426
              N+  D ATFAS+L A +    +  G+   S ++       +    + ++D+ +++G 
Sbjct: 399 RETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGR 458

Query: 427 LKDAIQTFKEM-PERNIVSWNALISACAQNG 456
           +++A +  + M  E  I  W AL+S C  +G
Sbjct: 459 VEEAQELIESMITEPGIAIWVALLSGCLNHG 489



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + VS+  +I  Y K G+L+ AR +F+ +  R ++SW  +I  Y       EA  LF+ MR
Sbjct: 340 DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMR 399

Query: 65  TDGGSDPDYVTFATLLSGCSE 85
            +    PD+ TFA+LLS  S 
Sbjct: 400 -ETNVKPDHATFASLLSAFSH 419


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/557 (39%), Positives = 344/557 (61%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+  HA ++      ++  +N L+++YSK   V  AR++F EMP    VS+N MI     
Sbjct: 83  GKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N +  E+L L  ++Q      S+F  S++L   A K  L   + +H   I       V V
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           A +L+D+YAKCG  ++A  +F ++   S V W++M + YVQ    E+AL LF +     +
Sbjct: 203 ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGL 262

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             DQ   +S++ A A LA++  GKQ+++ + +SGF SN+F  S+L+DMYAK G ++++ +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F+++ +RN+V WNA+IS  +++  +   +  FE M Q G  P+ V+ +SVLSAC H GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +++G +YF+ MT+++ L P   HY+ MVD L R+G   EA  L++++PF     MW S++
Sbjct: 383 VKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCR H NLE A+ AA +LF +E   ++  Y+ +SN+YA  G+W+ V++++K ++E  V+
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEP-HNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVK 501

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+K KVH+F   +  HP+  EI  K+  +M E++K GYK +T   LH   E 
Sbjct: 502 KERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGES 561

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
           IK E L++HSE+LA    L+  P  +PI +MKNLR C DCH+ +KL SK   R++ VRD+
Sbjct: 562 IKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDT 621

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFK+G CSC DFW
Sbjct: 622 NRFHHFKNGCCSCGDFW 638



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 197/366 (53%), Gaps = 2/366 (0%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           HA I+  G  + L+  N L++ Y K   +D AR+VF EMP +  VS+N +I    + G  
Sbjct: 87  HAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEE 146

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
            EA+ L ++MQ  G   S+FT ++ L A      ++  + +HAF +K     NVFVA AL
Sbjct: 147 NEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATAL 206

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           LD+Y+K   + +A  +F  MP+   V+++ M   Y  NE Y+++L LFR+   T     Q
Sbjct: 207 LDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQ 266

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           F  S+++   A    +  G+Q++     +   S + VA+SL+DMYAKCG  EE+ ++F +
Sbjct: 267 FLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRD 326

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   + V W AMIS   +     E + LF +M +  +S +  TF S+L A   +  +  G
Sbjct: 327 VEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKG 386

Query: 396 KQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACA 453
           ++    + +   ++ NVF  S ++D  +++G + +A     ++P     S W +L+++C 
Sbjct: 387 QKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCR 446

Query: 454 QNGDAQ 459
            +G+ +
Sbjct: 447 THGNLE 452



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 192/358 (53%), Gaps = 3/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +++N+LI+ Y K G++  AR++F+ M  R+ VSW  +IG  +Q  +  EA  L + M+
Sbjct: 98  DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G    ++ T +++L  C+     +E   +HA  IK   +  + +  +L+D Y K   +
Sbjct: 158 REGTPFSEF-TISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLM 216

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF+ MP +  V+++++  G+ +  + E+A+ LF +    G K   F  ++ + A 
Sbjct: 217 KDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GLA +  G+QV+A + K+ F  N+FVA++L+D+Y+K   + E+ K+F ++ + + V +N
Sbjct: 277 AGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWN 336

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIV 303
            MI+  + + +  E + LF ++Q      +   F ++LS   +   ++ G++     T  
Sbjct: 337 AMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKE 396

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
                 V   + +VD  ++ G+  EA ++ + L  + S   W +++++    GNLE A
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 169/353 (47%), Gaps = 42/353 (11%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L + A +  L  G+  H Q ++    +++  +N L++MY+KCG  + A+++F  +   S
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W  MI +  Q G   EAL+L ++M R      + T +S+L A A   +LS  + LH+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           F I++    NVF  +ALLD+YAK G +KDA+  F+ MP+R++V+W+++ +   QN   + 
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F    ++G + D   + SV+ AC+    + EG Q  N++  K          +S++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-VNALLSKSGFCSNIFVASSLI 308

Query: 521 DILCRSGCFDEAEKL----------------------------------MAQMPFEPDEI 546
           D+  + G  +E+ K+                                  M QM   P+++
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVAMSNIYAVAGQ 595
            + SV+++C    ++   KK       M K    AP    Y  M +  + AGQ
Sbjct: 369 TFVSVLSAC---GHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/557 (39%), Positives = 343/557 (61%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+  HA ++      ++  +N L+++YSK   V  AR++F EMP    VS+N MI     
Sbjct: 83  GKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N +  E+L L  ++Q      S+F  S++L   A K  L   + +H   I       V V
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           A +L+D+YAKCG  ++A  +F ++   S V W++M + YVQ    E+AL LF +     +
Sbjct: 203 ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGL 262

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             DQ   +S++ A A LA++  GKQ+++ + +SGF SN+F  S+L+DMYAK G ++++ +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F+++ +RN+V WNA+IS  +++  +   +  FE M Q G  P+ V+ +SVLSAC H GL
Sbjct: 323 VFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGL 382

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + +G +YF+ MT+++ L P   HY+ MVD L R+G   EA  L++++PF     MW S++
Sbjct: 383 VRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLL 442

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCR H NLE A+ AA +LF +E   ++  Y+ +SN+YA  G+W+ V++++K ++E  V+
Sbjct: 443 ASCRTHGNLELAEVAAKKLFDIEP-HNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVK 501

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+K KVH+F   +  HP+  EI  K+  +M E++K GYK +T   LH   E 
Sbjct: 502 KERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGES 561

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
           IK E L++HSE+LA    L+  P  +PI +MKNLR C DCH+ +KL SK   R++ VRD+
Sbjct: 562 IKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDT 621

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFK+G CSC DFW
Sbjct: 622 NRFHHFKNGCCSCGDFW 638



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 197/366 (53%), Gaps = 2/366 (0%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           HA I+  G  + L+  N L++ Y K   +D AR+VF EMP +  VS+N +I    + G  
Sbjct: 87  HAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEE 146

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
            EA+ L ++MQ  G   S+FT ++ L A      ++  + +HAF +K     NVFVA AL
Sbjct: 147 NEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATAL 206

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           LD+Y+K   + +A  +F  MP+   V+++ M   Y  NE Y+++L LFR+   T     Q
Sbjct: 207 LDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQ 266

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           F  S+++   A    +  G+Q++     +   S + VA+SL+DMYAKCG  EE+ ++F +
Sbjct: 267 FLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRD 326

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   + V W AMIS   +     E + LF +M +  +S +  TF S+L A   +  +  G
Sbjct: 327 VEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKG 386

Query: 396 KQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACA 453
           ++    + +   ++ NVF  S ++D  +++G + +A     ++P     S W +L+++C 
Sbjct: 387 QKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCR 446

Query: 454 QNGDAQ 459
            +G+ +
Sbjct: 447 THGNLE 452



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 192/358 (53%), Gaps = 3/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +++N+LI+ Y K G++  AR++F+ M  R+ VSW  +IG  +Q  +  EA  L + M+
Sbjct: 98  DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G    ++ T +++L  C+     +E   +HA  IK   +  + +  +L+D Y K   +
Sbjct: 158 REGTPFSEF-TISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLM 216

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF+ MP +  V+++++  G+ +  + E+A+ LF +    G K   F  ++ + A 
Sbjct: 217 KDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GLA +  G+Q++A + K+ F  N+FVA++L+D+Y+K   + E+ K+F ++ + + V +N
Sbjct: 277 AGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWN 336

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIV 303
            MI+  + + +  E + LF ++Q      +   F ++LS   +   ++ G++     T  
Sbjct: 337 AMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKE 396

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
                 V   + +VD  ++ G+  EA ++ + L  + S   W +++++    GNLE A
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 169/353 (47%), Gaps = 42/353 (11%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L + A +  L  G+  H Q ++    +++  +N L++MY+KCG  + A+++F  +   S
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W  MI +  Q G   EAL+L ++M R      + T +S+L A A   +LS  + LH+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           F I++    NVF  +ALLD+YAK G +KDA+  F+ MP+R++V+W+++ +   QN   + 
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F    ++G + D   + SV+ AC+    + EG Q  N++  K          +S++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-MNALLSKSGFCSNIFVASSLI 308

Query: 521 DILCRSGCFDEAEKL----------------------------------MAQMPFEPDEI 546
           D+  + G  +E+ K+                                  M QM   P+++
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVAMSNIYAVAGQ 595
            + SV+++C    ++   +K       M K    AP    Y  M +  + AGQ
Sbjct: 369 TFVSVLSAC---GHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/710 (34%), Positives = 408/710 (57%), Gaps = 21/710 (2%)

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           +A +L+ +M  + G   D     +L++ C++     E  ++H  +I  G+ + + +  +L
Sbjct: 13  QALELWGEME-ERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETAL 71

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           +  Y K   LD A+RVF+ M  KD  +++++I  +A+ G  E A+ L+  M   G +P+ 
Sbjct: 72  LQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNV 131

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            TFA AL     +A +A GR +H  ++ +   ++  + ++LL++Y K D +VEARK+F  
Sbjct: 132 VTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 191

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQI 293
           M   +  SY  MI+ Y    ++ E+L+LF  + +    + + + F+T+L  V    +L+ 
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           GR++H         + V V N+LV MY KCG   EA+++F +++  + + WT+MI+AY Q
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
            GN +EALNLF  M   ++     +F+S L A A L +L  G+++H  V+ +   S    
Sbjct: 312 HGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME 368

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
            ++LL MYA+ GSL DA + F  M  R+  S NA+I+A  Q+G  +  L+ +  M Q G 
Sbjct: 369 -TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGI 427

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
             D ++ +SVL ACSH  L+ +   +  S+   + + P  EHY  MVD+L RSG   +AE
Sbjct: 428 PADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAE 487

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
           +L+  MP++ D + W ++++ C+ H +L+  ++AA ++F++    +  PYV +SN+YA A
Sbjct: 488 ELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPA-ETLPYVFLSNMYAAA 546

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN----- 648
            +++   +V+K M ERGV +  A S++E+ +++H+FT+      Q     R +E      
Sbjct: 547 KRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLL 606

Query: 649 --LMQEMKKEGYKPDTSCALHDED----EEIKVESLKYHSERLAIAFALI--NTPEGS-P 699
             L++ MK+ GY PDT     ++     EE K  SL +HSERLAIA+ LI    P+ S P
Sbjct: 607 VELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRP 666

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + V+ + R C+ CH+AIKL+S IT + I VRD SRFHHF+ G CSC D W
Sbjct: 667 LRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 242/462 (52%), Gaps = 12/462 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G+L  A+ +F  M  +   +W+ +I  Y++  +   A  L+  M  + G +P
Sbjct: 71  LLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAE-GVEP 129

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA  L GC+      +   +H  I+        ++ +SL++ Y K   +  AR+VF
Sbjct: 130 NVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVF 189

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADI 190
           + M  ++  S+ A+I+ + + G + EA++LF  M  +   +P+ +TFA  L A  GL ++
Sbjct: 190 EGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNL 249

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             GR+VH  +    F  NV V NAL+ +Y K    VEARK+F  M   + +S+  MI  Y
Sbjct: 250 EKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAY 309

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A +   +E+L LF+ +     + S   FS+ L+  A    L  GR+IH   +V   ++  
Sbjct: 310 AQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIH-HRVVEANLASP 365

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           ++  SL+ MYA+CG  ++A+ +F  +         AMI+A+ Q G  ++AL ++ +M + 
Sbjct: 366 QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQE 425

Query: 371 NISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I AD  TF S+L A +  + ++  +  L S V+  G +  V     ++D+  +SG L D
Sbjct: 426 GIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGD 485

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQNGD----AQATLKSFE 466
           A +  + MP + + V+W  L+S C ++GD     +A  K FE
Sbjct: 486 AEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFE 527



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 210/396 (53%), Gaps = 6/396 (1%)

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +I    +EG   +A++L+ EM+  G     F   + ++A   L  +  GR++H  ++ T 
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  ++ +  ALL +Y+K   + +A+++F  M   D  +++ +I  YA   + + ++ L+R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            +     + +   F+  L   A+   L  GR IH + + +    +  + +SL++MY KC 
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASIL 383
              EA+++F  +   +   +TAMISAYVQ G   EAL LF  M +   I  +  TFA+IL
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A   L +L  G+++H  +   GF +NV   +AL+ MY K GS  +A + F  M  RN++
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SW ++I+A AQ+G+ Q  L  F+ M     +P  VS  S L+AC+  G ++EG +  + +
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +     P+ E   S++ +  R G  D+A ++  +M
Sbjct: 358 VEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 229/504 (45%), Gaps = 75/504 (14%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ V  + L++ Y+K   +  AR++F  M  R   S+T +I  Y Q  +  EA +LF  M
Sbjct: 164 QDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRM 223

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                 +P+  TFAT+L          +  +VH  +   G+++ +++ N+LV  Y K   
Sbjct: 224 SKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGS 283

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              AR+VF  M  ++ +S+ ++I  +A+ G  +EA+ LF  M     +PS  +F++AL+A
Sbjct: 284 PVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNA 340

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +  GR++H  VV+ N   +  +  +LL +Y++   + +AR++F  M   D  S 
Sbjct: 341 CALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSC 399

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL------SVVANKLDLQIGRQI 297
           N MI  +  + + K++L+++R+++          F ++L      S+VA+  D      +
Sbjct: 400 NAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDF-----L 454

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGN 356
            +  +    +  V+    +VD+  + GR  +A+E+   + +    V W  ++S   + G+
Sbjct: 455 QSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGD 514

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           L+                         RA+ ++  L+  + L  +V    F+SN      
Sbjct: 515 LDRG----------------------ERAARKVFELAPAETL-PYV----FLSN------ 541

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNI-----VSW----NALISACAQNGDAQAT------ 461
              MYA +    DA +  KEM ER +     VS+    N L    +   D Q        
Sbjct: 542 ---MYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRT 598

Query: 462 --------LKSFEDMVQSGYQPDS 477
                   ++  E M Q+GY PD+
Sbjct: 599 MERVRSLLVELLEPMKQAGYVPDT 622


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/589 (38%), Positives = 344/589 (58%), Gaps = 12/589 (2%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M  LG +P +FTF   + A   L     G ++H  VVK  +   VF++N+L+ +Y K D 
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLL 282
              +R++F EMP+ + VS++ +I     +++ KE   LFR++  + +R  R       +L
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRG-----AIL 115

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           + +A     +    ++   +      +  V ++   M+A+CGR E A+++F  +     V
Sbjct: 116 NAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLV 175

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W   I AYV+     EAL L  +M    I  D  T   ++RA + LAS  L   +H  +
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-I 234

Query: 403 IRSGFMSNVFSG--SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           I +GF  N      +AL+D+Y K GSL  A + F  M ERNI++W+A+IS    +G  + 
Sbjct: 235 ITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGRE 294

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F+ M ++  +PD ++ +S+LSACSH GL+ EG + FNSM + + + P+ EHYA MV
Sbjct: 295 ALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMV 353

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           DIL R+G  DEA   + +MP  P+  +W +++ +CRIH N++ A+  A  LF ++   +A
Sbjct: 354 DILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDP-HNA 412

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV + NIY + G+ +    ++  M+ RGV+K+  YS +E+K+K++ F A D  HPQT+
Sbjct: 413 GRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTD 472

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
            I  ++E LM  +++EGY PD +  LHD DEE K   L  HSE+LAI F L+N   GS I
Sbjct: 473 LIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVI 532

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            + KNLR C DCH A K ISK+TGREI VRD+ RFHHFK+G CSCRD+W
Sbjct: 533 RIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 19/394 (4%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  PD  TF  ++  CS        I++H D++KFGY S + I NSL+  Y K    +L+
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF EMP K++VS++A+I    ++   +E   LF +M   G +PS     A L+A   +
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACV 121

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                   V+  VV+     +  V +A   ++++   V  ARKLF  +   D V++   I
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTI 181

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFS-TLLSVV---ANKLDLQIGRQIHTQTIV 303
             Y   +   E+L L +++      +  FP + TLL V+   +     Q+   +H   I+
Sbjct: 182 EAYVKADMPLEALGLLKQMML----QGIFPDAITLLGVIRACSTLASFQLAHIVH--GII 235

Query: 304 TTAI---SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           TT       + V  +L+D+Y KCG    A+++F  +   + + W+AMIS Y   G   EA
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
           LNLF +M +A++  D  TF SIL A +    ++ G +  + + R  G        + ++D
Sbjct: 296 LNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354

Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           +  ++G L +A    + MP R N   W AL+ AC
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGAC 388



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 164/346 (47%), Gaps = 10/346 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y K      +R++F+ M D+ AVSW+ +IG   Q ++ +E F LF  M ++ G
Sbjct: 48  SNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSE-G 106

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S P        ++     + A+++ +V   +++ G +    + ++    + +   +++AR
Sbjct: 107 SRPSRGAILNAMACVRSHEEADDVYRV---VVENGLDFDQSVQSAAAGMFARCGRVEVAR 163

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F  +  KD V++   I  + K  +  EA+ L  +M   G  P   T    + A   LA
Sbjct: 164 KLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLA 223

Query: 189 DIALGRQVHAFVVKTNFVENVFVA--NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              L   VH  ++ T F  N  +A   AL+DLY K   +  ARK+F  M E + ++++ M
Sbjct: 224 SFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAM 282

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y  +   +E+L LF +++ +        F ++LS  ++   +  G +          
Sbjct: 283 ISGYGMHGWGREALNLFDQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFG 341

Query: 307 IS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
           ++   +    +VD+  + G+ +EA +    +    +   W A++ A
Sbjct: 342 VTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGA 387



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           NQ       LI  YVK G+L  AR++F+ M +R  ++W+ +I GY      REA  LF  
Sbjct: 242 NQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQ 301

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+      PD++TF ++LS CS      E  +    + + FG          +VD   + 
Sbjct: 302 MKAS--VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRA 359

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
             LD A    + MP + + +    + G  +  LN
Sbjct: 360 GKLDEACDFIERMPVRPNAAVWGALLGACRIHLN 393


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/763 (33%), Positives = 409/763 (53%), Gaps = 31/763 (4%)

Query: 2   PNQNTVSTNMLISGYVKSGNLAT--ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           PN +    N L++ Y + G  A   A  L + M  R AVS+ ++I  YS+      +   
Sbjct: 30  PNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLAT 89

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F   R       D  T+A  L+ CS          VHA ++  G  + L + NS+   Y 
Sbjct: 90  FARARA-WARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYA 148

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           +   +  ARRVF    ++D VS+NAL++G+ + G  EE +++F  M   G   + F   +
Sbjct: 149 RCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGS 208

Query: 180 ALSA------GVGLADIALGR---QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            +             D+  GR    VH  VVK     ++F+A+A++D+Y+K   +  A  
Sbjct: 209 IIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVA 268

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQY---KESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           LF  +P+ + +  N MI  +   E     +E+L L+ ELQ      S+F FS++L     
Sbjct: 269 LFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNL 328

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             +   G+QIH Q +  +   +V + ++L+D+Y+  G  E+    F +L     V WT++
Sbjct: 329 AGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSV 388

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           IS  VQ    EEAL LF E  R  +  D    +S++ A A LA    G+Q+    ++SGF
Sbjct: 389 ISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGF 448

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
                 G++ + M A+SG +  A + F+EM  R++VSW+A+IS+ A +G A+  L  F +
Sbjct: 449 NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNE 508

Query: 468 MVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           M+ +    P+ ++ LS+L+ACSH GL++EGL+Y+  M  +Y L P  +H   +VD+L R+
Sbjct: 509 MLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRA 568

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G   +AE  +    F  D ++W S++ SCRIH ++E  +  AD++  +E    +A YV +
Sbjct: 569 GRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPT-SSASYVIL 627

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            N+Y  AG+  S S+ +  M+ERGV+K    SW+EL S VH F A D+ HP++  I RK+
Sbjct: 628 YNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKV 687

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
             ++ ++            +   ++++       HSE+LA+AF +I+ P+ +PI VMKNL
Sbjct: 688 AEMVSKVA----------GISSREQDLA----GCHSEKLAVAFGMIHLPQSAPIRVMKNL 733

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH+ ++LISK   REI +RD+ RFH F+DG CSC  +W
Sbjct: 734 RVCRDCHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGYW 776



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 247/474 (52%), Gaps = 16/474 (3%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKE 152
           VHA + +   N+ L + N L+ SYC++       A R+  EMP++++VS+N +I  +++ 
Sbjct: 21  VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRA 80

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           GL   ++  F   +        FT+AAAL+A     D+  G+ VHA VV       +F++
Sbjct: 81  GLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLS 140

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N++  +Y++   + EAR++F    E D VS+N +++ Y      +E+L++F  +      
Sbjct: 141 NSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLG 200

Query: 273 RSQFPFSTLLSVVANKL------DLQIGR---QIHTQTIVTTAISEVKVANSLVDMYAKC 323
            + F   +++   A+        D+  GR    +H   +     +++ +A++++DMYAK 
Sbjct: 201 WNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 260

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE---EALNLFIEMCRANISADQATFA 380
           G    A  +F ++   + +   AMI+ + ++   +   EAL L+ E+    +   + +F+
Sbjct: 261 GALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFS 320

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           SILRA         GKQ+H  V++  F  +V+ GSAL+D+Y+ SG ++D  + F+ +P++
Sbjct: 321 SILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQ 380

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++V W ++IS C QN   +  L+ F++ V+ G +PD  ++ SV++AC+   +   G Q  
Sbjct: 381 DVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQ-I 439

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
             +  K           S + +  RSG  D A +   +M    D + WS+VI+S
Sbjct: 440 QCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEME-SRDVVSWSAVISS 492



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/459 (21%), Positives = 198/459 (43%), Gaps = 73/459 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+ N +  N +I+G+ +                                +  REA  L+
Sbjct: 273 VPDPNVIVLNAMIAGFCRE----------------------------EAADVAREALGLY 304

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            ++++  G  P   +F+++L  C+         Q+H  ++K  +   + I ++L+D Y  
Sbjct: 305 SELQSR-GMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSG 363

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C++   R F+ +P++D V + ++I+G  +  L EEA++LF E    G +P  F  ++ 
Sbjct: 364 SGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSV 423

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           ++A   LA    G Q+    VK+ F     + N+ + + ++   V  A + F EM   D 
Sbjct: 424 MNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDV 483

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRF-DRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           VS++ +I+ +A +   +++L +F E+   +    ++  F ++L+  ++   +  G + + 
Sbjct: 484 VSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYG 543

Query: 300 QTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                  +S  +K    +VD+  + GR  +A+    + + H   V W +++++    G++
Sbjct: 544 IMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDM 603

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           E          R  + AD+           +L   S      S+VI             L
Sbjct: 604 E----------RGQLVADKIM---------DLEPTSSA----SYVI-------------L 627

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNI-----VSWNALISA 451
            +MY  +G L  A +T   M ER +     +SW  L S 
Sbjct: 628 YNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSG 666


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/559 (41%), Positives = 342/559 (61%), Gaps = 6/559 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+HA ++K        V++ L++LYSK    + + ++F E P+    +++ +I+ +A 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 253 NEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           NE    +L+ FR +     R D   +P +T       + D  +G+ +H   + T    +V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD--VGKSVHCLAVKTGYYCDV 161

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V +SLVDMYAKCG   +A+ +F  +   + V W+ MI  Y Q  +  EAL LF +    
Sbjct: 162 FVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           ++  +  TF+S++R  +    L LGK +H   ++  F S+ F GSAL+ +Y+K G ++ A
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGA 281

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            Q F E+P RN+  WN+++ ACAQ+   Q     FE+M   G +P+ +S LSVL ACSH 
Sbjct: 282 YQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHA 341

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+E+G +YF S+ + Y + P+ EHYAS+VD+L R+G   EA  ++ QMP  P E +W +
Sbjct: 342 GLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++  CRIHK+ E A   AD++ +M+    +  +V +SN YA AG++E  ++++K +R+RG
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDS-SSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRG 459

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V+K T  SWVE  +KVH FTA D  H +  EI  K+E L +EM+K GY  DTS  L   D
Sbjct: 460 VKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVD 519

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            E K E+++YHSERLAIAF LI  P G PI VMKNLR C DCHAAIK +SK  GR + VR
Sbjct: 520 GEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVR 579

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFH F+DG CSC D+W
Sbjct: 580 DNNRFHRFEDGKCSCGDYW 598



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 209/391 (53%), Gaps = 1/391 (0%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + +Y     LL   +   +  + +Q+HA I+KFG  +I ++ ++L++ Y K +    + +
Sbjct: 22  EQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQ 81

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF E P+K S +++++I+ FA+      A++ F  M + G +P D  + +A  A   L  
Sbjct: 82  VFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRR 141

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G+ VH   VKT +  +VFV ++L+D+Y+K   + +AR LF EMPE + VS++ MI  
Sbjct: 142 SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYG 201

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA  +   E+L LF++      D + F FS+++ V ++   L++G+ IH   +  +  S 
Sbjct: 202 YAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSS 261

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V ++L+ +Y+KCG  E A ++F  +   +   W +M+ A  Q  + +    LF EM  
Sbjct: 262 SFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +  +F S+L A +    +  G++  S +   G        ++L+D+  ++G L++
Sbjct: 322 VGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQE 381

Query: 430 AIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           A+   K+MP R   S W AL++ C  + D +
Sbjct: 382 AVSVIKQMPMRPTESVWGALLTGCRIHKDTE 412



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 163/345 (47%), Gaps = 3/345 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           VS N LI+ Y K+     + ++F+    +++ +W+ +I  ++Q      A + F  M  D
Sbjct: 62  VSHN-LINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G  PD   + +    C     ++    VH   +K GY   + + +SLVD Y K   +  
Sbjct: 121 -GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR +F EMP+++ VS++ +I G+A+     EA+ LF +        +DFTF++ +     
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              + LG+ +H   +K +F  + FV +AL+ LYSK   +  A ++F E+P  +   +N M
Sbjct: 240 STFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSM 299

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +   A +   +    LF E+       +   F ++L   ++   ++ GR+  +       
Sbjct: 300 LIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGI 359

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
             E +   SLVD+  + G+ +EA  +   +    T   W A+++ 
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G QLH+ +++ G  +       L+++Y+K+     ++Q F E P+++  +W+++IS
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           A AQN      L+ F  M+  G +PD     S   AC         L+  +     + L 
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF-------LRRSDVGKSVHCLA 152

Query: 511 PKKEHY------ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            K  +Y      +S+VD+  + G   +A  L  +MP E + + WS +I
Sbjct: 153 VKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGMI 199


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/815 (32%), Positives = 411/815 (50%), Gaps = 80/815 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT----DG 67
           L+  Y K G +  A ++F        V WT ++ GY Q N   EA  LF  M      DG
Sbjct: 145 LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDG 204

Query: 68  G---------------------------SDPDYVTFATLLSGCSEPDTANELIQVHADII 100
                                        + D ++++T+++  +  + ANE + +  ++I
Sbjct: 205 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 264

Query: 101 --KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
             +F  NS+ ++  S + +    R L+  +++ K    KD VS+ AL++G+A+ G+  ++
Sbjct: 265 EKRFEPNSVTVV--SALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKS 322

Query: 159 IKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL 218
           + +F  M   G +P        L+A   L        +H +VV++ F  NVFV  +L++L
Sbjct: 323 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 382

Query: 219 YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-----------Q 267
           YSK   + +A KLF  M   D V ++ MI  Y  + +  E+L++F ++           Q
Sbjct: 383 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQ 442

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQI-------------------------GRQIHTQTI 302
            +   + Q P +     +A  +  ++                            +    I
Sbjct: 443 ISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNI 502

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
               +  + ++      MY    R + A  +F ++ +  +  W  MI  +   G    +L
Sbjct: 503 FAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSL 562

Query: 362 NLFIEMCRANISAD-------QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
            L+ +M    +  D       + +  S+L A   L +L  G+  HS+VI++GF  ++   
Sbjct: 563 ELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVA 622

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +A++DMY+K GSL  A   F E   +++V W+A+I++   +G  +  +  F+ MV++G +
Sbjct: 623 TAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVR 682

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P  V+   VLSACSH GL+EEG  YF  MT+++ +  K  +YA MVD+L R+G   EA  
Sbjct: 683 PSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVD 742

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           L+  MP EPD  +W S++ +CRIH NL+ A+K AD LF ++ +  A  +V +SNIYA   
Sbjct: 743 LIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVH-AGYHVLLSNIYAAKS 801

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W  V +V+K M  RG  K+  +S VE  ++VH F   D  HPQ  ++  K+E L   MK
Sbjct: 802 RWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMK 861

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
             GY P T   LHD +EE K  +L YHSERLAIAF LINT  G+ + + KNLR C DCH 
Sbjct: 862 HLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHN 921

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AIKLISKI  R I VRD  RFH F+DG CSC D+W
Sbjct: 922 AIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 212/472 (44%), Gaps = 78/472 (16%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            +T     L S Y K  +L  AR++F+         W   +  Y ++ Q+ E  +LF  M
Sbjct: 34  HDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLM 93

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-----YNSILIICNSLVDSY 118
               G  PD  T    L  C+       ++++   I  F        S + + ++LV+ Y
Sbjct: 94  ICTAGEAPDNFTIPIALKACA----GLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELY 149

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  A +VF+E  + D+V + +++TG+ +    EEA+ LF +M             
Sbjct: 150 SKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM------------- 196

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
                                V+   F  ++ + N+LL+LY+K  C   A  LF +MPE 
Sbjct: 197 ---------------------VMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK 235

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D +S++ MI CYA NE   E+L LF E+   RF+ +     + L   A   +L+ G++IH
Sbjct: 236 DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH 295

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +    +S                                   W A++S Y Q G   
Sbjct: 296 KIAVWKDVVS-----------------------------------WVALLSGYAQNGMAY 320

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           +++ +F  M    I  D      IL AS+EL        LH +V+RSGF SNVF G++L+
Sbjct: 321 KSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLI 380

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           ++Y+K GSL DA++ FK M  R++V W+++I+A   +G     L+ F+ M+Q
Sbjct: 381 ELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ 432



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 194/418 (46%), Gaps = 44/418 (10%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+H+ V KT  + + F A  L  LY+K   +  ARK+F E P  +   +N  +  Y   +
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 255 QYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKV 312
           Q++E+L+LF  +  T  +    F     L   A    L++G+ IH        I S++ V
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN- 371
            ++LV++Y+KCG+  EA ++F       TV WT+M++ Y Q  + EEAL LF +M   + 
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D     S+L   A+     +   L S +       +V S S ++  YA + +  +A+
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE----KDVISWSTMIACYANNEAANEAL 257

Query: 432 QTFKEMPE-----------------------------------RNIVSWNALISACAQNG 456
             F EM E                                   +++VSW AL+S  AQNG
Sbjct: 258 NLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNG 317

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            A  ++  F +M+  G QPD+V+++ +L+A S  G+ ++ L   +    +          
Sbjct: 318 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL-CLHGYVVRSGFNSNVFVG 376

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           AS++++  + G   +A KL   M    D ++WSS+I +  IH     A +  DQ+ ++
Sbjct: 377 ASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 21/326 (6%)

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H+Q   T  + +   A  L  +YAKC   + A+++F    H +   W + + +Y ++ 
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 356 NLEEALNLF-IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMSNVFS 413
             EE L LF + +C A  + D  T    L+A A L  L LGK +H F  ++    S++F 
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ--- 470
           GSAL+++Y+K G + +A++ F+E    + V W ++++   QN D +  L  F  MV    
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 471 -SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
             G  P   SLL+ L A + C  I   L  F+ M +K  +      +++M+     +   
Sbjct: 202 FDGDLPLVNSLLN-LYAKTGCEKIAANL--FSKMPEKDVIS-----WSTMIACYANNEAA 253

Query: 530 DEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           +EA  L  +M    FEP+ +   S + +C + +NLE  KK    + K+   +D   +VA+
Sbjct: 254 NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK----IHKIAVWKDVVSWVAL 309

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVR 612
            + YA  G       V + M   G++
Sbjct: 310 LSGYAQNGMAYKSMGVFRNMLSDGIQ 335


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 370/659 (56%), Gaps = 11/659 (1%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +H   +  GY +   + ++L   Y K+   D AR+VF  +P  D++ +N L+ G      
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP---- 191

Query: 155 NEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             EA++ FV M   G  +P   T A++L A    + +A+GR VH + VK    E+  V  
Sbjct: 192 GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            L+ LYSK   +  A+ LF  M   D V+YN +I+ Y+ N   + S++LF+EL  + +  
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +      ++ V +      + R +H   +     ++  V+ +L  +Y +    E A+ IF
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   +   W AMIS Y Q G  E A+ LF  M   N+  +  T +S L A A L +LS
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           LGK +H  + +     NV+  +AL+DMYAK GS+ +A   F  M  +N+VSWNA+IS   
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
            +G     LK ++DM+ +   P S + LSV+ ACSH GL++EG + F  MT +Y++ P  
Sbjct: 492 LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGI 551

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           EH   MVD+L R+G  +EA +L+++ P     P   +W +++ +C +HKN + AK A+ +
Sbjct: 552 EHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVHKNSDLAKLASQK 609

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF+++   +A  YV +SN+Y     +   + V++  + R + K    + +E+  + HVF 
Sbjct: 610 LFELDS-ENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFM 668

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           A D LHPQ+  I   +E L  +M + GY+P T  AL+D +EE K   +K HSE+LAIAF 
Sbjct: 669 AGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFG 728

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           L++T  G+ I ++KNLR C DCH A K ISK+T R I VRD+SRFHHF+DG CSC D+W
Sbjct: 729 LLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 223/477 (46%), Gaps = 12/477 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   + L   Y K      AR++F+++     + W  L+ G        EA + FV M 
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMV 203

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   PD  T A+ L   +E         VH   +K G      +   L+  Y K   +
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDM 263

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A+ +F  M   D V++NALI+G++  G+ E +++LF E+   G++P+  T  A +   
Sbjct: 264 DSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVY 323

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                  L R +HAFVVK     +  V+ AL  LY + + +  AR +F  M E    S+N
Sbjct: 324 SPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWN 383

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ YA N   + ++ LF+ +Q      +    S+ LS  A+   L +G+ +H      
Sbjct: 384 AMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKE 443

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                V V  +L+DMYAKCG   EA+ IF  + + + V W AMIS Y   G   EAL L+
Sbjct: 444 KLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLY 503

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
            +M  A I    +TF S++ A +    +  G+++   +         +   + ++D+  +
Sbjct: 504 KDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGR 563

Query: 424 SGSLKDAIQTFKEMPERNIVS--WNALISACA--QNGDAQ--ATLKSFE-DMVQSGY 473
           +G L +A++   E P+  I    W AL+ AC   +N D    A+ K FE D   +GY
Sbjct: 564 AGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGY 620


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/644 (35%), Positives = 372/644 (57%), Gaps = 5/644 (0%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           IC  LV+ Y K+     A       P    VSF A I+G A+      A+  F  M  +G
Sbjct: 47  ICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVG 106

Query: 170 FKPSDFTFAAALSAGVGLAD--IALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVV 226
            +P+DFTF +A  A          +G Q+HA  ++  ++  + FV+ A +D+Y K  C+ 
Sbjct: 107 LRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLG 166

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            AR+LF EMP  + +++N ++T    + +  E+ K +  L+      +        +  A
Sbjct: 167 LARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACA 226

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
             + L +G Q H   +      +V V+N++VD Y KC    +A+ +F  +   ++V W +
Sbjct: 227 GAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCS 286

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI AY Q G  E+AL +++              +S+L   A L  L+ G+ LH+  +RS 
Sbjct: 287 MIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSC 346

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
             +N+F  SAL+DMY K G ++DA Q F +MPERN+V+WNA+I   A  GDAQ  L  F+
Sbjct: 347 IDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFD 406

Query: 467 DMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            M++SG   P+ ++L++V++ACS  GL ++G + F++M +++ + P+ EHYA +VD+L R
Sbjct: 407 AMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGR 466

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  + A +++ +MP  P   +W +++ +C++H   E  + A+++LF+++  +D+  +V 
Sbjct: 467 AGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDP-QDSGNHVL 525

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+ A AG+W   + V+K M+  G++K    SW+  K+ VHVF A D  H + +EI+  
Sbjct: 526 LSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQAL 585

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +  L ++M+  GY PDT  +L+D +EE K   +  HSE+LA+AF LI+ P   PI + KN
Sbjct: 586 LAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKN 645

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH A K +S I GREI VRD++RFH+FK   CSC+D+W
Sbjct: 646 LRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 223/442 (50%), Gaps = 13/442 (2%)

Query: 36  TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL--SGCSEPDTANELI 93
           T VS+T  I G +Q  +   A   F  M    G  P+  TF +    + C+ P  +    
Sbjct: 75  TVVSFTAFISGAAQHARPLAALSAFAAM-LRVGLRPNDFTFPSAFKAAACAPPRCSTVGP 133

Query: 94  QVHADIIKFGY--NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           Q+HA  ++FGY      + C ++ D Y K  CL LARR+F+EMP ++ +++NA++T    
Sbjct: 134 QIHALALRFGYLPGDPFVSCAAM-DMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVI 192

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           +G   E  K +  ++  G  P+  +  A  +A  G   ++LG Q H FVV   F  +V V
Sbjct: 193 DGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSV 252

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           +NA++D Y K  C  +AR +F  M   + VS+  MI  YA +   +++L ++   + T  
Sbjct: 253 SNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGE 312

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
           + + F  S++L+  A  L L  GR +H   + +   + + VA++LVDMY KCG  E+A++
Sbjct: 313 EPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQ 372

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELA 390
           +F ++   + V W AMI  Y   G+ + AL +F  M R    S +  T  +++ A +   
Sbjct: 373 VFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGG 432

Query: 391 SLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNAL 448
               G +L  +   R G        + ++D+  ++G  + A +  + MP R  +S W AL
Sbjct: 433 LTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGAL 492

Query: 449 ISACAQNGDAQ----ATLKSFE 466
           + AC  +G  +    A+ K FE
Sbjct: 493 LGACKMHGKTELGRIASEKLFE 514



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 137/248 (55%), Gaps = 1/248 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K+G L  AR LF  M +R  ++W  ++       +  E FK +  +R  GG  P+ V+
Sbjct: 159 YFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGM-PNVVS 217

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
                + C+     +   Q H  ++  G++  + + N++VD Y K RC   AR VF  M 
Sbjct: 218 VCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMR 277

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            ++SVS+ ++I  +A+ G  E+A+ +++  ++ G +P+DF  ++ L+   GL  +  GR 
Sbjct: 278 VRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRA 337

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA  V++    N+FVA+AL+D+Y K   V +A ++F +MPE + V++N MI  YA    
Sbjct: 338 LHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGD 397

Query: 256 YKESLKLF 263
            + +L +F
Sbjct: 398 AQNALAVF 405



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 168/385 (43%), Gaps = 12/385 (3%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
             AA  A +      LGR  HA  ++  +     F+   L++LYSK D    A       
Sbjct: 12  LGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASD 71

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL--QI 293
           P    VS+   I+  A + +   +L  F  +       + F F +     A        +
Sbjct: 72  PNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTV 131

Query: 294 GRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           G QIH   +    +  +  V+ + +DMY K G    A+ +F  + + + + W A+++  V
Sbjct: 132 GPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAV 191

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G   E    +  +  A    +  +  +   A A    LSLG+Q H FV+  GF  +V 
Sbjct: 192 IDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVS 251

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             +A++D Y K      A   F  M  RN VSW ++I A AQ+G  +  L  +     +G
Sbjct: 252 VSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTG 311

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQY---FNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
            +P    + SVL+ C+  GL+  GL +    +++  +  +       +++VD+  + G  
Sbjct: 312 EEPTDFMVSSVLTTCA--GLL--GLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGV 367

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINS 554
           ++AE++   MP E + + W+++I  
Sbjct: 368 EDAEQVFLDMP-ERNLVTWNAMIGG 391



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 2/176 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N ++  Y K      AR +F+ M  R +VSW  +I  Y+Q     +A  +++  R  G 
Sbjct: 253 SNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGE 312

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              D++  +++L+ C+     N    +HA  ++   ++ + + ++LVD Y K   ++ A 
Sbjct: 313 EPTDFMV-SSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAE 371

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSA 183
           +VF +MP+++ V++NA+I G+A  G  + A+ +F  M +  G  P+  T    ++A
Sbjct: 372 QVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITA 427



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K G +  A ++F  M +R  V+W  +IGGY+     + A  +F  
Sbjct: 348 DANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDA 407

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKI 121
           M   GG+ P+++T   +++ CS      +  ++   +  +FG          +VD   + 
Sbjct: 408 MIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRA 467

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              + A  + + MP + S+S    + G  K
Sbjct: 468 GMEERAYEIIQRMPMRPSISVWGALLGACK 497



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 21/184 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA-----VSWTILIGGYSQKNQFRE 55
           MP +N V+ N +I GY   G+   A  +F++M+         ++   +I   S+    ++
Sbjct: 377 MPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKD 436

Query: 56  AFKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN 112
            ++LF  MR   G +P    Y     LL      + A E+IQ      +      + +  
Sbjct: 437 GYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQ------RMPMRPSISVWG 490

Query: 113 SLVDSYCKIRC-LDLAR----RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           +L+ + CK+    +L R    ++F+  PQ DS +   L    A  G   EA  +  EM++
Sbjct: 491 ALLGA-CKMHGKTELGRIASEKLFELDPQ-DSGNHVLLSNMLASAGRWAEATDVRKEMKN 548

Query: 168 LGFK 171
           +G K
Sbjct: 549 VGIK 552


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/662 (33%), Positives = 388/662 (58%), Gaps = 2/662 (0%)

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           GG  P      + LS C          + H  ++K G  S   +C SL+D Y K   +D 
Sbjct: 107 GGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDS 166

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A RV+ +M   D+ + N LI+ +A+ G   +A ++F+++ ++G +P+ +T++  L+    
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           ++ I  G+Q+HA VVK  ++    V NALL LYSK   + EA  +F  + + + +S+   
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTAS 286

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +  +  +K++LK F  ++ +  + ++F FS +L+      D   GR  HTQ I    
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFI 365
            S V V  +++DMY+  G  +EA++ F  +    S V W A+I+ YV    +E+A+  F 
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M + +++ ++ T+++I +A +   SL+   Q+HS +I+S   SN+   S+L++ Y + G
Sbjct: 407 RMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCG 466

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL++A+Q F ++ + ++VSWN++I A +QNGD    +     M++ G +P S + L+VLS
Sbjct: 467 SLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLS 526

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL++EG ++F SM Q Y ++P++ H + MVDIL R+G  + A   + ++  +P  
Sbjct: 527 ACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTA 586

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W  ++ +CR + NL+ A+  A+++  +E   DA  YV +SN+YA  G+W      ++ 
Sbjct: 587 SIWRPLLAACRYNSNLQMAEYVAEKILDLEP-NDATVYVTLSNMYAEVGRWADAENQRRL 645

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M ++ + K    SW+E+ +K++ F ++D+ HP+  ++  K++ L+++++  GY P T+  
Sbjct: 646 MEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTV 705

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LH E  + K + + YHSE+LA+ F L++ P G PI V+KNLR C DC++ +K IS+IT R
Sbjct: 706 LHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDR 765

Query: 726 EI 727
            I
Sbjct: 766 YI 767



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/527 (31%), Positives = 278/527 (52%), Gaps = 32/527 (6%)

Query: 95   VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
            +HA ++  G   +      L+  Y +   L  AR++F ++P  +   +  L    A+ G 
Sbjct: 825  LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 884

Query: 155  NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             EEA+  F EMQ  G +P+ F   + L A   L+D   G  +H  ++K +F  + ++ +A
Sbjct: 885  YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 944

Query: 215  LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
            L+ +YSK   V +A ++F  + + D V  N M++ YA +    E+L L +++Q      +
Sbjct: 945  LIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPN 1004

Query: 275  QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
               ++TL++  +     Q+G +        + +SEV                   + + A
Sbjct: 1005 VVSWNTLIAGFS-----QVGDK--------SMVSEV------------------FRLMTA 1033

Query: 335  NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            N      V WT++IS +VQ  +  E  + F EM          T +S+L A   +A+L  
Sbjct: 1034 NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRH 1093

Query: 395  GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
            GK++H + +  G   +V+  SAL+DMYAK G + +A   F  MPERN V+WN+LI   A 
Sbjct: 1094 GKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYAN 1153

Query: 455  NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
            +G     ++ F  M +S  + D ++  +VL+ACSH G++E G   F  M +KY++ P+ E
Sbjct: 1154 HGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLE 1213

Query: 515  HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
            HYA MVD+L R+G   EA  L+  MP EPD+ +W +++ +CR H N+E A+ AA+ LF++
Sbjct: 1214 HYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFEL 1273

Query: 575  EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
            E        + +SN+YA AG+W + +++KK M++R   K    SW+E
Sbjct: 1274 EP-ESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 232/451 (51%), Gaps = 4/451 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K G + +A  +++ M    A +   LI  Y++   F +AF++F+ +  + G+ P
Sbjct: 154 LIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQI-GNMGTRP 212

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++ T++T+L+ C       E  Q+HA ++K  Y S   + N+L+  Y K   ++ A  VF
Sbjct: 213 NHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVF 272

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + + Q++ +S+ A I GF + G  ++A+K F  M+  G +P++FTF+  L++   + D  
Sbjct: 273 ESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFI 332

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVSYNVMITCY 250
            GR  H  V+K      VFV  A++D+YS    + EA K F +M      VS+N +I  Y
Sbjct: 333 DGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGY 392

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             NE+ +++++ F  +       ++F +S +    ++   L    QIH++ I +   S +
Sbjct: 393 VLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNL 452

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            VA+SL++ Y +CG  E A ++F  +S    V W ++I AY Q G+  +A+ L  +M   
Sbjct: 453 HVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEE 512

Query: 371 NISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                  TF ++L A +    +  G++   S V            S ++D+  ++G L++
Sbjct: 513 GNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLEN 572

Query: 430 AIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           A+   K++  +   S W  L++AC  N + Q
Sbjct: 573 ALDFIKKLTMKPTASIWRPLLAACRYNSNLQ 603



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 35/478 (7%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+S Y + G L+ AR+LF+ + +     W +L G  +++  + EA   F +M+ +G   P
Sbjct: 844  LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEG-LRP 902

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            +     ++L  C           +H  I+K  + S   I ++L+  Y K   ++ A RVF
Sbjct: 903  NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 962

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
              +  KD V  NA+++G+A+ G   EA+ L  +MQ  G KP+  ++   ++    + D +
Sbjct: 963  DWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKS 1022

Query: 192  LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            +  +V            +  AN +                     E D VS+  +I+ + 
Sbjct: 1023 MVSEVF----------RLMTANGV---------------------EPDVVSWTSVISGFV 1051

Query: 252  WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             N    E    F+E+    F  S    S+LL    N  +L+ G++IH   +V     +V 
Sbjct: 1052 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY 1111

Query: 312  VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            V ++LVDMYAKCG   EAK +F  +   +TV W ++I  Y   G   EA+ LF +M  ++
Sbjct: 1112 VRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESD 1171

Query: 372  ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDA 430
               D  TF ++L A +    + LG+ L   +     +       A ++D+  ++G L +A
Sbjct: 1172 TKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEA 1231

Query: 431  IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSA 486
                K MP E +   W AL+ AC  +G+ +    + E + +     P S  LLS L A
Sbjct: 1232 YDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYA 1289



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 37/445 (8%)

Query: 167  HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            H  F+ S  T+A A+        +  GR +HA +V        + A  L+  Y++   + 
Sbjct: 796  HRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLS 855

Query: 227  EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
             ARKLF ++P  +   + V+    A    Y+E+L  F E+Q      +QF   ++L    
Sbjct: 856  NARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACG 915

Query: 287  NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
            +  D + G  +HT  +  +  S+  + ++L+ MY+KCG  E+A  +F  +     V   A
Sbjct: 916  HLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNA 975

Query: 347  MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
            M+S Y Q G + EALBL  +M +A +  +  ++ +++   +++   S+  ++   +  +G
Sbjct: 976  MVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANG 1035

Query: 407  FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
               +V                               VSW ++IS   QN        +F+
Sbjct: 1036 VEPDV-------------------------------VSWTSVISGFVQNFHNHEGFDAFK 1064

Query: 467  DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILC 524
            +M+  G+ P SV++ S+L AC++   +  G +          +  +K+ Y  +++VD+  
Sbjct: 1065 EMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHG---YAMVIGVEKDVYVRSALVDMYA 1121

Query: 525  RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
            + G   EA+ L   MP E + + W+S+I     H     A +  +Q+ + +   D   + 
Sbjct: 1122 KCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFT 1180

Query: 585  AMSNIYAVAGQWESVSQVKKAMRER 609
            A+ N  + AG  E    +   M+E+
Sbjct: 1181 AVLNACSHAGMVELGESLFXKMQEK 1205



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 166/354 (46%), Gaps = 7/354 (1%)

Query: 261  KLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            +++R +   R F  S   ++  + + A    L  GR +H   ++         A  L+  
Sbjct: 788  RVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSF 847

Query: 320  YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
            Y +CG+   A+++F  + + +   W  +  A  ++G  EEAL+ F EM +  +  +Q   
Sbjct: 848  YTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVL 907

Query: 380  ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
             SIL+A   L+    G+ +H+ ++++ F S+ +  SAL+ MY+K G ++ A + F  + +
Sbjct: 908  PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVD 967

Query: 440  RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            +++V  NA++S  AQ+G     L   + M Q+G +P+ VS  ++++  S  G      + 
Sbjct: 968  KDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEV 1027

Query: 500  FNSMTQKYKLRPKKEHYASMVDILCRS----GCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            F  MT    + P    + S++    ++      FD  ++++ Q  F P  +  SS++ +C
Sbjct: 1028 FRLMTAN-GVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQ-GFCPSSVTISSLLPAC 1085

Query: 556  RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
                NL   K+       +   +D     A+ ++YA  G       +   M ER
Sbjct: 1086 TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 1139



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 6/237 (2%)

Query: 5    NTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREAFKLF 60
            N VS N LI+G+ + G+ +   E+F  M    V+   VSWT +I G+ Q     E F  F
Sbjct: 1004 NVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAF 1063

Query: 61   VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +M  D G  P  VT ++LL  C+         ++H   +  G    + + ++LVD Y K
Sbjct: 1064 KEM-LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAK 1122

Query: 121  IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               +  A+ +F  MP++++V++N+LI G+A  G   EAI+LF +M+    K    TF A 
Sbjct: 1123 CGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAV 1182

Query: 181  LSAGVGLADIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMP 236
            L+A      + LG  +   + +   +E      A ++DL  +   + EA  L   MP
Sbjct: 1183 LNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMP 1239


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/585 (39%), Positives = 361/585 (61%), Gaps = 8/585 (1%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P    +   L     L  +  G+ VH  ++ + F  ++ + N++L +Y+K   +  AR
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKES----LKLFRELQFTRFDRSQFPFSTLLSVV 285
           ++F EM   D V++  MIT Y+  + Y  S    L LF E+       ++F  S+L+   
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYS-QDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
                   G+QIH           V V +SLVDMYA+CG   E++ +F  L   + V W 
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           A+IS + +KG  EEAL LF++M R    A + T++++L +S+   SL  GK LH+ +++S
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           G     + G+ LL MYAKSG++ DA + F  + + ++VS N+++   AQ+G  +  ++ F
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385

Query: 466 EDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           E+M +    +P+ ++ LSVL+ACSH GL++EGL YF  M +KY L PK  HY ++VD+  
Sbjct: 386 EEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM-KKYGLEPKLSHYTTVVDLFG 444

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G  D+A+  + +MP EP+  +W +++ + ++HKN E    AA ++ +++     A + 
Sbjct: 445 RAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGA-HT 503

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            +SNIYA AGQW+ V++V+K M++ G++K  A SWVE+++ VH+F+AND  HPQ N++  
Sbjct: 504 LLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
             ENL Q++K+ GY PDTS      D++ K  +L+YHSE+LA+AFAL+NT  GS I +MK
Sbjct: 564 MWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMK 623

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           N+R C DCH+AIK +S +  REI VRD++RFHHF+DG CSCRD+W
Sbjct: 624 NIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 224/432 (51%), Gaps = 6/432 (1%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D+  +G  +PD   +  LL  C+      +   VH  ++   + + L+I NS++  Y K
Sbjct: 79  LDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAK 138

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE---AIKLFVEMQHLGFKPSDFTF 177
              L++AR+VF EM  KD V++ ++ITG++++G       A+ LF+EM   G +P++F  
Sbjct: 139 CGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFAL 198

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ +     L     G+Q+H    K  F ENVFV ++L+D+Y++   + E+R +F E+  
Sbjct: 199 SSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES 258

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + VS+N +I+ +A   + +E+L LF ++Q   F  ++F +S LL   +    L+ G+ +
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   + +       V N+L+ MYAK G   +AK++F  L  +  V   +M+  Y Q G  
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLG 378

Query: 358 EEALNLFIE-MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           +EA+ LF E M    I  +  TF S+L A +    L  G      + + G    +   + 
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTT 438

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQ 474
           ++D++ ++G L  A    +EMP E N   W AL+ A   + + +    + + +++   + 
Sbjct: 439 VVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFY 498

Query: 475 PDSVSLLSVLSA 486
           P + +LLS + A
Sbjct: 499 PGAHTLLSNIYA 510



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 195/361 (54%), Gaps = 10/361 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQK---NQFREAFKLFV 61
           + V  N ++  Y K G+L  AR++F+ M  +  V+WT +I GYSQ    +    A  LF+
Sbjct: 125 DLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFL 184

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +M  DG   P+    ++L+  C    +  +  Q+H    K+G+   + + +SLVD Y + 
Sbjct: 185 EMVRDG-LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L  +R VF E+  K+ VS+NALI+GFA++G  EEA+ LFV+MQ  GF  ++FT++A L
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            +      +  G+ +HA ++K+      +V N LL +Y+K   + +A+K+F  + +VD V
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           S N M+  YA +   KE+++LF E+  +   + +   F ++L+  ++   L  G  ++  
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG--LYYF 421

Query: 301 TIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            ++     E K+++  ++VD++ + G  ++AK     +    +   W A++ A     N 
Sbjct: 422 ELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNT 481

Query: 358 E 358
           E
Sbjct: 482 E 482



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 2/234 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    + L+  Y + G L  +R +F+ +  +  VSW  LI G+++K +  EA  LFV M
Sbjct: 228 ENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKM 287

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +G    ++ T++ LL   S   +  +   +HA ++K G   +  + N+L+  Y K   
Sbjct: 288 QREGFGATEF-TYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALS 182
           +  A++VF  + + D VS N+++ G+A+ GL +EA++LF EM   +  +P+D TF + L+
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A      +  G      + K      +     ++DL+ +   + +A+    EMP
Sbjct: 407 ACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMP 460


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/691 (35%), Positives = 376/691 (54%), Gaps = 17/691 (2%)

Query: 71  PDYVTFA----TLLSGCSE-----PDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCK 120
           PD  +FA    +L S CS      P  A+  ++ +HA  +  G+ +   + ++L   Y  
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAA 179
           +   + AR+VF  +P  D+V +N L+ G +      EA++ FV M   G  +P   T A+
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLAS 226

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A   +A+  +GR VHAF  K    ++  V   L+ LY+K   +  AR LF  M   D
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPD 286

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V+YN +I+ Y+ N     S++LF+EL       S      L+ V +      +   +H 
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHA 346

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +     +   V+ +L  +Y +    + A+  F  +   +   W AMIS Y Q G  E 
Sbjct: 347 HVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEM 406

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ LF +M   N+  +  T +S L A A+L +LSLGK +H  +       NV+  +AL+D
Sbjct: 407 AVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALID 466

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY K GS+ +A   F  M  +N+VSWN +IS    +G     LK ++DM+ +   P S +
Sbjct: 467 MYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSST 526

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            LSVL ACSH GL++EG   F SMT  Y + P  EH   MVD+L R+G   EA +L+++ 
Sbjct: 527 FLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEF 586

Query: 540 PFEP-DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           P       +W +++ +C +HK+ + AK A+ +LF++E   +   YV +SN+Y    Q+  
Sbjct: 587 PKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEP-ENTGYYVLLSNLYTSKKQYSE 645

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + V++  + R + K    + +E+  + HVF A D  HPQ++ I   +E L  +M + GY
Sbjct: 646 AAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGY 705

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
           +PDT  AL+D +EE K   +K HSE+LAIAF L+NT  G+ I ++KNLR C DCH A K+
Sbjct: 706 RPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKI 765

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ISK+T R I VRD+SRFHHF+DG CSC D+W
Sbjct: 766 ISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 175/343 (51%), Gaps = 6/343 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LIS Y K G++  AR LF+ M     V++  LI GYS       + +LF ++    G  P
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKEL-VGMGLRP 320

Query: 72  DYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
              T   L+     P     L   +HA ++K G ++   +  +L   YC+   +D ARR 
Sbjct: 321 SSSTLVALIP-VHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  MP+K   S+NA+I+G+A+ GL E A+ LF +MQ L  +P+  T ++ALSA   L  +
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +LG+ VH  +       NV+V  AL+D+Y K   + EAR +F  M   + VS+NVMI+ Y
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE- 309
             + Q  E+LKL++++       +   F ++L   ++   ++ G  +         I+  
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP--WTAMISA 350
           ++    +VD+  + G+ +EA E+ +     +  P  W A++ A
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGA 602



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 2/236 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N   +  L + Y +  ++ +AR  F++M ++T  SW  +I GY+Q      A  LF  
Sbjct: 354 DANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQ 413

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+      P+ +T ++ LS C++    +    VH  I        + +  +L+D Y K  
Sbjct: 414 MQAL-NVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCG 472

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  AR +F  M  K+ VS+N +I+G+   G   EA+KL+ +M      P+  TF + L 
Sbjct: 473 SIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLY 532

Query: 183 AGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A      +  G  V  +          +     ++DL  +   + EA +L  E P+
Sbjct: 533 ACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 588


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/613 (37%), Positives = 345/613 (56%), Gaps = 9/613 (1%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S S+N  +   A + L  E+I L+  M   G  P  F+F   L +   L+    G+Q+H 
Sbjct: 15  STSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 74

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD--GVSYNVMITCYAWNEQY 256
            V++       FV  AL+ +Y K   V +ARK+F E P     GV YN +I+ Y  N + 
Sbjct: 75  HVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKV 134

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            ++  +FR ++ T           L+ +      L +GR +H + +     SEV V NS 
Sbjct: 135 SDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSF 194

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           + MY KCG  E  + +F  +     + W A+IS Y Q G   + L LF +M  + +  D 
Sbjct: 195 ITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDP 254

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T  S+L + A L +  +G+++   V  +GF  NVF  +AL+ MYA+ G+L  A   F  
Sbjct: 255 FTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDI 314

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           MP +++VSW A+I     +G  +  L  F+DM++ G +PD    + VLSACSH GL ++G
Sbjct: 315 MPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 374

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           L+ F +M ++YKL P  EHY+ +VD+L R+G  DEA + +  MP EPD  +W +++ +C+
Sbjct: 375 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACK 434

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IHKN++ A+ A  ++ + E + +   YV MSNIY+ +   E + +++  MRER  RK   
Sbjct: 435 IHKNVDMAELAFAKVIEFEPM-NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 493

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
           YS+VE K KVH+F A D  H QT E+ R ++ L   + +     D      D  EE+   
Sbjct: 494 YSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDC-----DRGEEVS-S 547

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
           + + HSERLAIAF ++N+  G+ ILV+KNLR C DCH  IKL+SKI  R   VRD+SRFH
Sbjct: 548 TTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFH 607

Query: 737 HFKDGFCSCRDFW 749
           +FKDG CSC+D+W
Sbjct: 608 YFKDGVCSCKDYW 620



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 224/492 (45%), Gaps = 10/492 (2%)

Query: 30  NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTA 89
           NS V  T  SW + +   + ++ F E+  L+  M    GS PD  +F  +L  C+     
Sbjct: 10  NSAVAST--SWNVRLRELAYQSLFTESISLYRSM-LRSGSSPDAFSFPFILKSCASLSLP 66

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD--SVSFNALIT 147
               Q+H  +I+ G  +   +  +L+  YCK   ++ AR+VF+E P      V +NALI+
Sbjct: 67  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+       +A  +F  M+  G      T    +        + LGR +H   VK     
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
            V V N+ + +Y K   V   R+LF EMP    +++N +I+ Y+ N    + L+LF +++
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
            +      F   ++LS  A+    +IG+++            V ++N+L+ MYA+CG   
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLA 306

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ +F  +   S V WTAMI  Y   G  E  L LF +M +  I  D A F  +L A +
Sbjct: 307 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACS 366

Query: 388 ELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSW 445
                  G +L   + R           S L+D+  ++G L +A++    MP E +   W
Sbjct: 367 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVW 426

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
            AL+ AC  + +      +F  +++  ++P ++    ++S        +EG+     M +
Sbjct: 427 GALLGACKIHKNVDMAELAFAKVIE--FEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 484

Query: 506 KYKLRPKKEHYA 517
           +   R KK  Y+
Sbjct: 485 ERAFR-KKPGYS 495



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 6/373 (1%)

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI-GRQ 296
           V   S+NV +   A+   + ES+ L+R +  +      F F  +L   A+ L L + G+Q
Sbjct: 13  VASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCAS-LSLPVSGQQ 71

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST--VPWTAMISAYVQK 354
           +H   I     +E  V  +L+ MY KCG  E+A+++F    H S   V + A+IS Y   
Sbjct: 72  LHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTAN 131

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
             + +A  +F  M    +S D  T   ++        L LG+ LH   ++ G  S V   
Sbjct: 132 SKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVL 191

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++ + MY K GS++   + F EMP + +++WNA+IS  +QNG A   L+ FE M  SG  
Sbjct: 192 NSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVC 251

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD  +L+SVLS+C+H G  + G Q    + +     P      +++ +  R G   +A  
Sbjct: 252 PDPFTLVSVLSSCAHLGAKKIG-QEVGELVEANGFAPNVFLSNALISMYARCGNLAKARA 310

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           +   MP +   + W+++I    +H   E      D + K     D A +V + +  + +G
Sbjct: 311 VFDIMPVK-SLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSG 369

Query: 595 QWESVSQVKKAMR 607
             +   ++ +AM+
Sbjct: 370 LTDKGLELFRAMK 382



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 184/392 (46%), Gaps = 23/392 (5%)

Query: 12  LISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           LIS Y K G +  AR++F  N    +  V +  LI GY+  ++  +A  +F  M+  G S
Sbjct: 91  LISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVS 150

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D VT   L+  C+ P+       +H + +K G  S + + NS +  Y K   ++  RR
Sbjct: 151 -VDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRR 209

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F EMP K  +++NA+I+G+++ GL  + ++LF +M+  G  P  FT  + LS+   L  
Sbjct: 210 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGA 269

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G++V   V    F  NVF++NAL+ +Y++   + +AR +F  MP    VS+  MI C
Sbjct: 270 KKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 329

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK----LDLQIGRQIHTQTIVTT 305
           Y  +   +  L LF ++           F  +LS  ++       L++ R +  +  +  
Sbjct: 330 YGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 389

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE------ 358
                   + LVD+  + GR +EA E   ++        W A++ A     N++      
Sbjct: 390 GPEHY---SCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAF 446

Query: 359 ------EALNLFIEMCRANISADQATFASILR 384
                 E +N+   +  +NI +D      I R
Sbjct: 447 AKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWR 478



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 5/241 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+ Y+K G++ + R LF+ M  +  ++W  +I GYSQ     +  +LF  M++ G  
Sbjct: 192 NSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVC 251

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T  ++LS C+         +V   +   G+   + + N+L+  Y +   L  AR 
Sbjct: 252 -PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARA 310

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGL 187
           VF  MP K  VS+ A+I  +   G+ E  + LF +M   G +P    F   LSA    GL
Sbjct: 311 VFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGL 370

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVM 246
            D  L     A   +          + L+DL  +   + EA +    MP E DG  +  +
Sbjct: 371 TDKGL-ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGAL 429

Query: 247 I 247
           +
Sbjct: 430 L 430



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 53/307 (17%)

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F   S +++  W   +     +    E+++L+  M R+  S D  +F  IL++ A L+  
Sbjct: 7   FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI--VSWNALIS 450
             G+QLH  VIR G  +  F  +AL+ MY K G ++DA + F+E P  +   V +NALIS
Sbjct: 67  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---------------------- 488
               N         F  M ++G   DSV++L ++  C+                      
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186

Query: 489 -------------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
                         CG +E G + F+ M  K  +      + +++    ++G   +  +L
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLIT-----WNAVISGYSQNGLAYDVLEL 241

Query: 536 MAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN---- 588
             QM      PD     SV++SC  H     AKK   ++ ++ +    AP V +SN    
Sbjct: 242 FEQMKSSGVCPDPFTLVSVLSSC-AHLG---AKKIGQEVGELVEANGFAPNVFLSNALIS 297

Query: 589 IYAVAGQ 595
           +YA  G 
Sbjct: 298 MYARCGN 304



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 62/146 (42%), Gaps = 7/146 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +N LIS Y + GNLA AR +F+ M  ++ VSWT +IG Y           LF DM 
Sbjct: 288 NVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDM- 346

Query: 65  TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              G  PD   F  +LS CS     D   EL +      K         C  LVD   + 
Sbjct: 347 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC--LVDLLGRA 404

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALI 146
             LD A      MP + D   + AL+
Sbjct: 405 GRLDEAMEFIDSMPVEPDGAVWGALL 430


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/742 (31%), Positives = 395/742 (53%), Gaps = 80/742 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y   G+L   R +F++M  +    W  ++  Y++   F+E+  LF  M   G    
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 195

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                   + G   P++A+EL                                      F
Sbjct: 196 --------IEG-KRPESASEL--------------------------------------F 208

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-- 189
            ++  +D +S+N++I+G+   GL E  ++++ +M +LG    D   A  +S  VG A+  
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGI---DVDLATIISVLVGCANSG 265

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            ++LG+ VH+  +K+ F   +  +N LLD+YSK   +  A ++F +M E + VS+  MI 
Sbjct: 266 TLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  + +   +++L ++++           +++L   A    L  G+ +H         S
Sbjct: 326 GYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMES 385

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V N+L+DMY KCG  + A  +F+ +     + W  MI                    
Sbjct: 386 NLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI-------------------- 425

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T A IL A A L++L  GK++H +++R+G+ S+    +AL+D+Y K G L 
Sbjct: 426 -GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  +P +++VSW  +IS    +G     + +F +M  +G +PD VS +S+L ACS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+E+G ++F  M   + + PK EHYA MVD+L R+G   +A + +  +P  PD  +W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIW 604

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++  CRI+ ++E A+K A+++F++E   +   YV ++NIYA A +WE V ++++ + +
Sbjct: 605 GALLCGCRIYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKWEEVKRMREKIGK 663

Query: 609 RGVRKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +G+RK    SW+E+K KV++F + N+  HP + +I   ++ + ++MK+EGY P T  AL 
Sbjct: 664 KGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 723

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF L+  P    + V KNLR C DCH   K +SK T REI
Sbjct: 724 NADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREI 783

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDS+RFHHFK+G+CSCR FW
Sbjct: 784 VLRDSNRFHHFKNGYCSCRGFW 805



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 221/477 (46%), Gaps = 50/477 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLA--------------------TARELFNSMVDRTAVSW 40
           M  +N    N ++S Y K G+                      +A ELF+ + DR  +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISW 219

Query: 41  TILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
             +I GY          +++  M   G  D D  T  ++L GC+   T +    VH+  I
Sbjct: 220 NSMISGYVSNGLTERGLEIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           K  +   +   N+L+D Y K   LD A RVF++M +++ VS+ ++I G+ ++G ++ AI+
Sbjct: 279 KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIR 338

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L  +M+  G K       + L A      +  G+ VH ++   N   N+FV NAL+D+Y+
Sbjct: 339 LLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYT 398

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +  A  +F  M   D +S+N MI      E   +S  +                + 
Sbjct: 399 KCGSMDGANSVFSTMVVKDIISWNTMI-----GELKPDSRTM----------------AC 437

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A+   L+ G++IH   +     S+  VAN+LVD+Y KCG    A+ +F  +    
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT MIS Y   G   EA+  F EM  A I  D+ +F SIL A +    L  G +   
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF- 556

Query: 401 FVIRSGFM--SNVFSGSALLDMYAKSGSLKDA---IQTFKEMPERNIVSWNALISAC 452
           +++++ F     +   + ++D+ +++G+L  A   I+T    P+  I  W AL+  C
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI--WGALLCGC 611



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 203/472 (43%), Gaps = 84/472 (17%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +NA I  F + G  E A++L    Q    +    T+++ L    G   +  G++VH+ + 
Sbjct: 69  YNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKKVHSIIK 126

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
             N   +  +   L+ LY+    + E R++F  M + +   +N M++ YA    +KES+ 
Sbjct: 127 SNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 262 LFR----------------ELQFTRFDRSQFPF--------------------------- 278
           LF+                EL     DR    +                           
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG 246

Query: 279 -----STLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                +T++SV+   AN   L +G+ +H+  I +T    +  +N+L+DMY+KCG  + A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   + V WT+MI+ Y + G  + A+ L  +M +  +  D     SIL A A   
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG 366

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  GK +H ++  +   SN+F  +AL+DMY K GS+  A   F  M  ++I+SWN +I 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG 426

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
                                  +PDS ++  +L AC+    +E G +        Y LR
Sbjct: 427 E---------------------LKPDSRTMACILPACASLSALERGKE-----IHGYILR 460

Query: 511 ---PKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                  H A ++VD+  + G    A  L   +P   D + W+ +I+   +H
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMISGYGMH 511


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/709 (34%), Positives = 387/709 (54%), Gaps = 42/709 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKE 133
           +LL  C    T   L  +HA +IK G ++     + L++  C +      L  A  VF  
Sbjct: 7   SLLHXCK---TLQSLRIIHAQMIKTGLHNTNYALSKLLEX-CVLSPHFDGLPYAISVFDT 62

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           + +   + +N +  G A       A+KL+V M  LG  P+ +TF   L +         G
Sbjct: 63  IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA-- 251
           +Q+H  V+K  F  ++++  +L+ +Y ++  + +A+K+  +    D VSY  +IT YA  
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182

Query: 252 --------------------WNE---------QYKESLKLFRELQFTRFDRSQFPFSTLL 282
                               WN           YKE+L+LF+++  T     +    T+L
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S  A    +++GRQ+H+          +K+ N+L+D+Y+KCG  E A  +F  LS+   +
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W  +I  Y      +EAL LF +M R+    +  T  SIL A A L ++ +G+ +H ++
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYI 362

Query: 403 IR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            +   G  +     ++L+DMYAK G ++ A Q F  M  R++ SWNA+I   A +G A A
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
               F  M ++G +PD ++ + +LSACSH G+++ G   F SMT+ YKL PK EHY  M+
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMI 482

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+   SG F EAEK++  M  EPD ++W S++ +C++H N+E  +  A  L K+E   + 
Sbjct: 483 DLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEP-ENP 541

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV +SNIYA A +W  V++ +  + ++G++KV   S +E+ S VH F   D+ HP+  
Sbjct: 542 GSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 601

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LAIAF LI+T  G+ +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 661

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ++KNLR C +CH A KLISKI  REI  RD +RFHHF+DG CSC D+W
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 239/505 (47%), Gaps = 43/505 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F+++ +   + W  +  G++  +    A KL+V M    G  P+  TF  LL
Sbjct: 52  GLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCM-VSLGLLPNSYTFPFLL 110

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV---------- 130
             C++     E  Q+H  ++KFG++  L I  SL+  Y +   L+ A++V          
Sbjct: 111 KSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVV 170

Query: 131 ---------------------FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                F E+P KD VS+NA I+G+A+ G  +EA++LF +M    
Sbjct: 171 SYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN 230

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P + T    LSA      I LGRQVH+++    F  N+ + NAL+DLYSK   +  A 
Sbjct: 231 VRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETAC 290

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  +   D +S+N +I  Y     YKE+L LF+++  +    +     ++LS  A+  
Sbjct: 291 GLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLG 350

Query: 290 DLQIGRQIHTQTI-----VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            + IGR IH         VT A S   +  SL+DMYAKCG  E A+++F ++ + S   W
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            AMI  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +   + R
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR 467

Query: 405 S-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
               M  +     ++D+   SG  K+A +    M  E + V W +L+ AC  +G+ +   
Sbjct: 468 DYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGE 527

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSA 486
              +++++     P S  LLS + A
Sbjct: 528 SYAQNLIKIEPENPGSYVLLSNIYA 552



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 180/360 (50%), Gaps = 5/360 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G + +A ++F+ +  +  VSW   I GY++   ++EA +LF  
Sbjct: 166 HRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T+LS C++  +     QVH+ I   G+   L I N+L+D Y K  
Sbjct: 226 MMKT-NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG 284

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A  +F+ +  KD +S+N LI G+    L +EA+ LF +M   G KP+D T  + LS
Sbjct: 285 ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A   L  I +GR +H ++ K          +  +L+D+Y+K   +  A+++F  M     
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HT 299
            S+N MI  +A + +   +  +F  ++    +     F  LLS  ++   L +GR I  +
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            T     + +++    ++D+    G F+EA+++   +      V W +++ A    GN+E
Sbjct: 465 MTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 37/314 (11%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE---AKEIFANLSH 338
           LS++     LQ  R IH Q I T   +     + L++       F+    A  +F  +  
Sbjct: 6   LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              + W  M   +    +   AL L++ M    +  +  TF  +L++ A+  +   G+QL
Sbjct: 66  PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT------------------------- 433
           H  V++ GF  +++  ++L+ MY ++G L+DA +                          
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185

Query: 434 ------FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
                 F E+P +++VSWNA IS  A+ G+ +  L+ F+ M+++  +PD  ++++VLSAC
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +  G IE G Q  +S    +      +   +++D+  + G  + A  L   +    D I 
Sbjct: 246 AQSGSIELGRQ-VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDVIS 303

Query: 548 WSSVINSCRIHKNL 561
           W+++I     H NL
Sbjct: 304 WNTLIGG-YTHMNL 316


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/621 (37%), Positives = 344/621 (55%), Gaps = 2/621 (0%)

Query: 130 VFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           VF + P   ++  +N +I G   +     A+ L+  M      P  FTF+  L A   L 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              LG  +H+ V KT F  +VFV   ++  YSK   + +A K+F +M   + VS+  MI 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                 +++E++ LFR L  +      F    +L   A   DL+ GR I           
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            V VA SLVDMY KCG  EEA+ +F  +     V W+AMI  Y   G   EA+ LF EM 
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           + N+  D       L + A L +L LG      +    F+SN   G++L+D YAK GS++
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A+  +K M E++ V +NA+IS  A  G   A    F  M + G  P+  + + +L  C+
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+++G  YFNSM+  + + P  EHY  MVD+L R+G  DEA  L+  MP + + I+W
Sbjct: 419 HAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            S++  CR+H+  + A+    QL ++E   ++  YV +SNIY+ + +W+   +++  + E
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQLIELEPW-NSGHYVLLSNIYSASRRWDEAEKIRSTVNE 537

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +G++K+  YSWVE+   VH F   D  HP + +I  K+E+L +++K+ GY P T   L D
Sbjct: 538 KGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFD 597

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +EE K   L  HSE+LA+AFALI+T     I V+KNLR C DCH AIK ISK+TGREI 
Sbjct: 598 VEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIV 657

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           +RD++RFH F DG CSCRD+W
Sbjct: 658 IRDNNRFHCFSDGACSCRDYW 678



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 205/439 (46%), Gaps = 15/439 (3%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           +  +I G   K++F  A  L+  M       PD  TF+ +L  C+  +  +  + +H+ +
Sbjct: 72  YNTMIRGMVSKDRFNNAVHLYASMHK-AAIVPDSFTFSFVLKACARLNLFHLGVMIHSLV 130

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
            K G++  + +  ++V  Y K   L  A +VF +M  K+ VS+  +I G  + G   EA+
Sbjct: 131 FKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAV 190

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            LF  +   G +P  F     L A   L D+  GR +   + +     NVFVA +L+D+Y
Sbjct: 191 DLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMY 250

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           +K   + EAR +F  M E D V ++ MI  YA N   +E+++LF E++        +   
Sbjct: 251 TKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMV 310

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
             LS  A+   L++G            +S   +  SL+D YAKCG  EEA  ++  +   
Sbjct: 311 GALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK 370

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
             V + A+IS     G +  A  +F +M +  I  ++ TF  +L        +  G+  H
Sbjct: 371 DRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR--H 428

Query: 400 SFVIRSGFMSNVFSGS-------ALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISA 451
            F      MS+ FS +        ++D+ A++G L +A    K MP + N++ W +L+  
Sbjct: 429 YF----NSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484

Query: 452 CAQNGDAQATLKSFEDMVQ 470
           C  + + Q      + +++
Sbjct: 485 CRLHRETQLAEHVLKQLIE 503



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 4/346 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V TN ++  Y K G L  A ++F+ MV +  VSWT +I G  +  +FREA  LF  +  +
Sbjct: 141 VKTN-VVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGL-LE 198

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G  PD      +L  C+          +   + + G +  + +  SLVD Y K   ++ 
Sbjct: 199 SGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEE 258

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF  M +KD V ++A+I G+A  GL  EAI+LF EM+ +  +P  +    ALS+   
Sbjct: 259 ARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCAS 318

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L  + LG      +    F+ N  +  +L+D Y+K   + EA  ++  M E D V +N +
Sbjct: 319 LGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAV 378

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTT 305
           I+  A   Q   +  +F ++       ++  F  LL    +   +  GR   ++ +   +
Sbjct: 379 ISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFS 438

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
               ++    +VD+ A+ G  +EA  +   +    + + W +++  
Sbjct: 439 VTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG 484



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 12/240 (5%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N      L+  Y K G++  AR +F+ MV++  V W+ +I GY+     REA +LF +
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-GYNSILIICNSLVDSYCKI 121
           MR      PD       LS C+    A EL      ++ +  + S  ++  SL+D Y K 
Sbjct: 297 MRKV-NVRPDCYAMVGALSSCASLG-ALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKC 354

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++ A  V+K M +KD V FNA+I+G A  G    A  +F +M   G  P++ TF   L
Sbjct: 355 GSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414

Query: 182 SAGVGLADIALGRQV-----HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
                   +  GR       H F V T  +E+      ++DL ++   + EA  L   MP
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDFSV-TPTIEHY---GCMVDLLARAGFLDEAHNLIKGMP 470


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/684 (35%), Positives = 383/684 (55%), Gaps = 78/684 (11%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   FA LL  C +  +  E   VHA IIK  ++S + I N LVD Y K   L+ AR+VF
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 132 -------------------------------KEMPQKDSVSFNALITGFAKEGLNEEAIK 160
                                          K MP++D  S+NA+++GFA+    EEA++
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
             V+M    F  ++++F +ALSA  GL D+++G Q+H  + K+ +  +V++ +AL+D+YS
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   V  A++ F +M   + VS+N +ITCY  N    ++L++F  +     +  +   ++
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEI------- 332
           + S  A+   ++ G QIH + +      +++ + N+LVDMYAKC R  EA+ +       
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 333 ------------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
                                   F+N+   + V W A+I+ Y Q G  EEA+ LF+ + 
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM------SNVFSGSALLDMYA 422
           R +I     TF ++L A A LA L LG+Q H+ +++ GF       S++F G++L+DMY 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++D    F+ M ER+ VSWNA+I   AQNG     L+ F +M+ SG +PD V+++ 
Sbjct: 438 KCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIG 497

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG  YF SMT ++ L P K+HY  MVD+L R+GC DEA  L+  MP E
Sbjct: 498 VLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPME 557

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W S++ +C++H N+   K  A++L +++ L ++ PYV +SN+YA  G+W+ V +V
Sbjct: 558 PDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPL-NSGPYVLLSNMYAELGRWKDVVRV 616

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR+ GV K    SW+ ++S +HVF   D+ HP   +I   ++ L ++MK+ GY P+ 
Sbjct: 617 RKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEA 676

Query: 663 SCALHDEDEEIKVES---LKYHSE 683
                D+DE  + ES   L  HSE
Sbjct: 677 -----DDDEPYEEESDSELILHSE 695



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 251/497 (50%), Gaps = 41/497 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +NT S N ++    K G L  A  LF  M +R   SW  ++ G++Q+++F EA +  
Sbjct: 80  MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFV 139

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           VDM ++     +Y +F + LS C+     +  +Q+H  I K  Y+  + + ++LVD Y K
Sbjct: 140 VDMHSEDFVLNEY-SFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSK 198

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R +  A+R F +M  ++ VS+N+LIT + + G   +A+++FV M + G +P + T A+ 
Sbjct: 199 CRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASV 258

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP--- 236
            SA   L+ I  G Q+HA V+K + +  ++ + NAL+D+Y+K   V EAR +F  MP   
Sbjct: 259 ASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRD 318

Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                       E + VS+N +I  Y  N + +E+++LF  L+ 
Sbjct: 319 VVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKR 378

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F  LL+  AN  DL++GRQ HT  +       +   S++ V NSL+DMY K
Sbjct: 379 ESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMK 438

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E+ + +F  +     V W AMI  Y Q G   EAL +F EM  +    D  T   +
Sbjct: 439 CGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGV 498

Query: 383 LRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
           L A +    +  G+    S  I  G +      + ++D+  ++G L +A    + MP E 
Sbjct: 499 LSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEP 558

Query: 441 NIVSWNALISACAQNGD 457
           + V W +L++AC  +G+
Sbjct: 559 DAVVWGSLLAACKVHGN 575


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/742 (32%), Positives = 393/742 (52%), Gaps = 80/742 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y   G+L   R +F++M  +    W  ++  Y++   F+E+  LF  M   G    
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 195

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                   + G   P++A EL                                      F
Sbjct: 196 --------IEG-KRPESAFEL--------------------------------------F 208

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-- 189
            ++  +D +S+N++I+G+   GL E  + ++ +M +LG    D   A  +S  VG A+  
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI---DVDLATIISVLVGCANSG 265

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            ++LG+ VH+  +K++F   +  +N LLD+YSK   +  A ++F +M E + VS+  MI 
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  + +   ++KL ++++           +++L   A    L  G+ +H         S
Sbjct: 326 GYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMES 385

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V N+L+DMYAKCG  E A  +F+ +     + W  MI                    
Sbjct: 386 NLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------------------- 425

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T A +L A A L++L  GK++H +++R+G+ S+    +AL+D+Y K G L 
Sbjct: 426 -GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  +P +++VSW  +I+    +G     + +F +M  +G +PD VS +S+L ACS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+E+G ++F  M   + + PK EHYA MVD+L R+G   +A + M  +P  PD  +W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIW 604

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++  CR + ++E A+K A+++F++E   +   YV ++NIYA A +WE V ++++ + +
Sbjct: 605 GALLCGCRNYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKWEEVKRLREKIGK 663

Query: 609 RGVRKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +G+RK    SW+E+K KV++F + N+  HP +  I   ++ + ++MK+EG+ P T  AL 
Sbjct: 664 QGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALI 723

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF L+  P    I V KNLR C DCH   K +SK T REI
Sbjct: 724 NADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREI 783

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDS+RFHHFKDG+CSCR FW
Sbjct: 784 VLRDSNRFHHFKDGYCSCRGFW 805



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 232/508 (45%), Gaps = 48/508 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLA--------------------TARELFNSMVDRTAVSW 40
           M  +N    N ++S Y K G+                      +A ELF+ + DR  +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISW 219

Query: 41  TILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
             +I GY           ++  M   G  D D  T  ++L GC+   T +    VH+  I
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           K  +   +   N+L+D Y K   LD A RVF++M +++ VS+ ++I G+ ++G ++ AIK
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L  +M+  G K       + L A      +  G+ VH ++   N   N+FV NAL+D+Y+
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +  A  +F  M   D +S+N MI      E   +S  +                + 
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMI-----GELKPDSRTM----------------AC 437

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A+   L+ G++IH   +     S+  VAN+LVD+Y KCG    A+ +F  +    
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT MI+ Y   G   EA+  F EM  A I  D+ +F SIL A +    L  G +   
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF- 556

Query: 401 FVIRSGFM--SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +++++ F     +   + ++D+ +++G+L  A +  + +P   +   W AL+  C    D
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHD 616

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            +   K  E + +   +P++     +L+
Sbjct: 617 IELAEKVAERVFE--LEPENTGYYVLLA 642



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 202/472 (42%), Gaps = 84/472 (17%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +NA I  F + G  E A++L    Q    +    T+ + L    GL     G++VH+ + 
Sbjct: 69  YNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
             +   +  +   L+  Y+    + E R++F  M + +   +N M++ YA    +KES+ 
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 262 LFR------------ELQFTRFDR------------------------------------ 273
           LF+            E  F  FD+                                    
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 274 SQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                +T++SV+   AN   L +G+ +H+  I ++    +  +N+L+DMY+KCG  + A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   + V WT+MI+ Y + G  + A+ L  +M +  +  D     SIL A A   
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  GK +H ++  +   SN+F  +AL+DMYAK GS++ A   F  M  ++I+SWN +I 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
                                  +PDS ++  VL AC+    +E G +        Y LR
Sbjct: 427 E---------------------LKPDSRTMACVLPACASLSALERGKE-----IHGYILR 460

Query: 511 ---PKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                  H A ++VD+  + G    A  L   +P   D + W+ +I    +H
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMH 511


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/661 (35%), Positives = 365/661 (55%), Gaps = 70/661 (10%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D   FA LL  C +  ++ +   VH  +I+  +   + I N L+D Y K   LD AR+VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 132 KEM-------------------------------PQKDSVSFNALITGFAKEGLNEEAIK 160
             M                               P+KD  S+N++I GFA+    EEA+ 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
            FV M    F  +D++F + LSA   L D+ LG Q+H  + K+ +  +VF+ + L+D YS
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   V  AR++F  M E + VS+N +ITCY  N    E+L+ F  +    F   +   ++
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAK--------- 330
           ++S  A     + G QIH + + +    +++ + N+LVDMYAKCGR  EA+         
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 331 ----------------------EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
                                  +FA +     V W A+I+ Y Q G  EEAL LF  + 
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM------SNVFSGSALLDMYA 422
           R ++     TF ++L ASA LA L LG+Q HS V++ GF        ++F G++L+DMY 
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GS+++ ++ F+ M E++ VSWN +I   AQNG     L+ F+ M++SG +PD V+++ 
Sbjct: 443 KCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
            L ACSH GL+EEG +YF SMT+++ L P K+HY  MVD+L R+GC +EA+ L+  MP +
Sbjct: 503 TLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQ 562

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++WSS++++C++H+N+   K  A+++F+++    + PYV ++N+Y+  G+W     V
Sbjct: 563 PDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPT-SSGPYVLLANMYSELGRWGDAVSV 621

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR RGV K    SW++++S VHVF   D+ HPQ  EI   ++ L + M++ GY PD 
Sbjct: 622 RKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDA 681

Query: 663 S 663
           S
Sbjct: 682 S 682



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/492 (32%), Positives = 243/492 (49%), Gaps = 41/492 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N  S N +IS  ++ G +  +  LF+ M ++   SW  +I G++Q ++F EA   F
Sbjct: 85  MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWF 144

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M  D     DY +F + LS CS         Q+H  I K  Y+  + + + L+D Y K
Sbjct: 145 VRMHRDDFVLNDY-SFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  ARRVF  M +K+ VS+N LIT + + G   EA++ F  M  LGFKP + T A+ 
Sbjct: 204 CGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP--- 236
           +SA   LA    G Q+HA VVK++ F  ++ + NAL+D+Y+K   V EAR +F  MP   
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323

Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                       + D VS+N +I  Y  N + +E+L LFR L+ 
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F  LL+  AN  DL++GRQ H+  +       +    ++ V NSL+DMY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  EE   +F N+     V W  MI  Y Q G   EAL LF +M  +    D  T    
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503

Query: 383 LRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER- 440
           L A +    +  G++   S     G +      + ++D+  ++G L++A    + MP++ 
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563

Query: 441 NIVSWNALISAC 452
           + V W++L+SAC
Sbjct: 564 DAVVWSSLLSAC 575


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/743 (33%), Positives = 404/743 (54%), Gaps = 20/743 (2%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           K G+  +A +LF+ M     V++  LI GY Q +   +   LF D     G   D    A
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILF-DKARRLGLKLDKYNCA 71

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
             L+ CS+    +    +H  I+ +G  S +++ NSL+D Y K   +D AR +F    + 
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA------GVGLADIA 191
           D VS+N+LI G+ + G  EE + +  +M   G   + +T  +AL A      G  +    
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKM---- 187

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H   +K     +V V  ALLD+Y+K   + +A ++F +M + + V YN M+    
Sbjct: 188 FGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLL 247

Query: 252 WNEQYKE-----SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
             E  ++     +L LF E++      S F +S+LL       D +  +Q+H        
Sbjct: 248 QQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL 307

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +S+  + + L+D+Y+  G   +A   F ++ +++ VP TAMI  Y+Q G  E AL+LF E
Sbjct: 308 LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYE 367

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           +       D+  F++I+ + A +  L  G+Q+     + G        ++ + MYAKSG 
Sbjct: 368 LLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGD 427

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  A  TF++M   +IVSW+ +I + AQ+G A   L+ FE M   G +P+  + L VL A
Sbjct: 428 LYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIA 487

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL+EEGL+YF++M + YK++   +H   +VD+L R+G   +AE L+ ++ FE + +
Sbjct: 488 CSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPV 547

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           MW +++++CRIHK+   A++ A ++ ++E L  +A YV + NIY  AG   + S+V+  M
Sbjct: 548 MWRALLSACRIHKDTVTAQRVAQKVIELEPLA-SASYVLLYNIYMDAGNKLAASKVRTLM 606

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
            ER ++K    SW+++  KV+ F + D  H  + +I  K++ ++   K+     D    L
Sbjct: 607 EERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDI---L 663

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
             + E   + ++ YHSE+LA+AF ++   E +P+ VMKNLR C DCH  +KL S +  RE
Sbjct: 664 GYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRE 723

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRDS RFHHFKDG CSC D+W
Sbjct: 724 LIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 215/462 (46%), Gaps = 12/462 (2%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V TN LI  Y K G +  AR LF+       VSW  LI GY Q  ++ E   +   M  
Sbjct: 102 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 161

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +G +   Y T  + L  CS      ++    +H   IK G +  +++  +L+D Y K   
Sbjct: 162 NGLAFNTY-TLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGS 220

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE-----AIKLFVEMQHLGFKPSDFTFA 178
           LD A ++F +M  K+ V +NA++ G  ++   E+     A+ LF EM+  G KPS FT++
Sbjct: 221 LDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYS 280

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           + L A + + D    +QVHA + K   + + ++ + L+DLYS    +++A   F  +  +
Sbjct: 281 SLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNL 340

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             V    MI  Y  N +++ +L LF EL        +F FST++S  AN   L+ G QI 
Sbjct: 341 TIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQ 400

Query: 299 TQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
                   IS   +  NS + MYAK G    A   F  + +   V W+ MI +  Q G+ 
Sbjct: 401 GHA-TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHA 459

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSA 416
            EAL  F  M    I  +   F  +L A +    +  G +    + +   M  +V     
Sbjct: 460 MEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVC 519

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           ++D+  ++G L DA      +  E   V W AL+SAC  + D
Sbjct: 520 VVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKD 561


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/710 (34%), Positives = 379/710 (53%), Gaps = 48/710 (6%)

Query: 87   DTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI 146
            ++   L  +HA  +K G    L   N L+  Y K   +  A+++F E+PQ+++ ++  LI
Sbjct: 303  NSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILI 362

Query: 147  TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
            +GFA+ G +E    LF EMQ  G  P+ +T ++ L       ++ LG+ VHA++++    
Sbjct: 363  SGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGID 422

Query: 207  ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
             +V + N++LDLY K      A +LF  M E D VS+N+MI  Y      ++SL +FR L
Sbjct: 423  VDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL 482

Query: 267  QFT---------------RFDR----------------SQFPFSTLLSVVANKLDLQIGR 295
             +                 ++R                S   FS  L + ++   +++GR
Sbjct: 483  PYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGR 542

Query: 296  QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF------------ANLSH----I 339
            Q+H   +     S+  + +SLV+MY KCGR ++A  I             A +S+     
Sbjct: 543  QLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKA 602

Query: 340  STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
              V W +M+S YV  G  E+ L  F  M R  +  D  T  +I+ A A    L  G+ +H
Sbjct: 603  GIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVH 662

Query: 400  SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
            ++V + G   + + GS+L+DMY+KSGSL DA   F++  E NIV W ++IS  A +G   
Sbjct: 663  AYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGM 722

Query: 460  ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
              +  FE+M+  G  P+ V+ L VL+ACSH GLIEEG +YF  M   Y + P  EH  SM
Sbjct: 723  HAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSM 782

Query: 520  VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
            VD+  R+G   + +  + +        +W S ++SCR+HKN+E  K  ++ L ++    D
Sbjct: 783  VDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAP-SD 841

Query: 580  AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
               YV +SN+ A   +W+  ++V+  M +RGV+K    SW++LK ++H F   D  HPQ 
Sbjct: 842  PGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQD 901

Query: 640  NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            +EI   ++ L+  +K+ GY  D    + D +EE     + +HSE+LA+ F +INT   +P
Sbjct: 902  DEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTP 961

Query: 700  ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            I ++KNLR CTDCH  IK  S++  REI VRD  RFHHFK G CSC D+W
Sbjct: 962  IRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 249/538 (46%), Gaps = 55/538 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q     N L++ Y KS N+A A++LF+ +  R   +WTILI G+++       F LF +M
Sbjct: 322 QTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREM 381

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G   P+  T +++L  CS  +       VHA +++ G +  +++ NS++D Y K + 
Sbjct: 382 QAKGAC-PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440

Query: 124 LDLARRV-------------------------------FKEMPQKDSVSFNALITGFAKE 152
            + A R+                               F+ +P KD VS+N ++ G  + 
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G    A++    M   G + S  TF+ AL     L+ + LGRQ+H  V+K  F  + F+ 
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIR 560

Query: 213 NALLDLYSK-----------HDCVVE------ARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           ++L+++Y K            D  ++      AR  + E P+   VS+  M++ Y WN +
Sbjct: 561 SSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKE-PKAGIVSWGSMVSGYVWNGK 619

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           Y++ LK FR +            +T++S  AN   L+ GR +H          +  V +S
Sbjct: 620 YEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSS 679

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+DMY+K G  ++A  +F   +  + V WT+MIS Y   G    A+ LF EM    I  +
Sbjct: 680 LIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPN 739

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSALLDMYAKSGSL-KDAIQ 432
           + TF  +L A +    +  G +    +++  +  N  V   ++++D+Y ++G L K    
Sbjct: 740 EVTFLGVLNACSHAGLIEEGCRYFR-MMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNF 798

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSH 489
            FK         W + +S+C  + + +      E ++Q +   P +  LLS + A +H
Sbjct: 799 IFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNH 856



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 198/445 (44%), Gaps = 44/445 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M   + VS N++I  Y+++G++  + ++F  +  +  VSW  ++ G  Q    R A +  
Sbjct: 451 MNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQL 510

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G++   VTF+  L   S         Q+H  ++KFG++S   I +SLV+ YCK
Sbjct: 511 YCM-VECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCK 569

Query: 121 IRCLDLARRVFKEM----------------PQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
              +D A  + +++                P+   VS+ ++++G+   G  E+ +K F  
Sbjct: 570 CGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRL 629

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M          T    +SA      +  GR VHA+V K     + +V ++L+D+YSK   
Sbjct: 630 MVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGS 689

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A  +F +  E + V +  MI+ YA + Q   ++ LF E+       ++  F  +L+ 
Sbjct: 690 LDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNA 749

Query: 285 VANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE-IFAN-LSHIST 341
            ++   ++ G R              V+   S+VD+Y + G   + K  IF N +SH+++
Sbjct: 750 CSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTS 809

Query: 342 VPWTAMISAYVQKGNLE-----------------EALNLFIEMCRANISADQATFASIL- 383
           V W + +S+     N+E                  A  L   MC +N   D+A     L 
Sbjct: 810 V-WKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLM 868

Query: 384 -----RASAELASLSLGKQLHSFVI 403
                +     + + L  Q+H+FV+
Sbjct: 869 HQRGVKKQPGQSWIQLKDQIHTFVM 893


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/559 (41%), Positives = 341/559 (61%), Gaps = 6/559 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+HA ++K        V++ L++LYSK    + + ++F E P+    +++ +I+ +A 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 253 NEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           NE    +L+ FR +     R D   +P +T       + D  +G+ +H   + T    +V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSD--VGKSVHCLAVKTGYYCDV 161

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V +SLVDMYAKCG   +A+ +F  +   + V W+ MI  Y Q  +  EAL LF +    
Sbjct: 162 FVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           ++  +  TF+S++R  +    L LGK +H   ++  F S+ F GSAL+ +Y+K G ++ A
Sbjct: 222 DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGA 281

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            Q F E+P RN+  WN+++ ACAQ+   Q     FE+M   G +P+ +  LSVL ACSH 
Sbjct: 282 YQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHA 341

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+E+G +YF S+ + Y + P+ EHYAS+VD+L R+G   EA  ++ QMP  P E +W +
Sbjct: 342 GLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++  CRIHK+ E A   AD++ +M+    +  +V +SN YA AG++E  ++++K +R+RG
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDS-SSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRG 459

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V+K T  SWVE  +KVH FTA D  H +  EI  K+E L +EM+K GY  DTS  L   D
Sbjct: 460 VKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVD 519

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            E K E+++YHSERLAIAF LI  P G PI VMKNLR C DCHAAIK +SK  GR + VR
Sbjct: 520 GEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVR 579

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFH F+DG CSC D+W
Sbjct: 580 DNNRFHRFEDGKCSCGDYW 598



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 208/391 (53%), Gaps = 1/391 (0%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + +Y     LL   +   +  + +Q+HA I+KFG  +I ++ ++L++ Y K +    + +
Sbjct: 22  EQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQ 81

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF E P+K S +++++I+ FA+      A++ F  M + G +P D  + +A  A   L  
Sbjct: 82  VFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRR 141

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G+ VH   VKT +  +VFV ++L+D+Y+K   + +AR LF EMPE + VS++ MI  
Sbjct: 142 SDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYG 201

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA  +   E+L LF++      D + F FS+++ V ++   L++G+ IH   +  +  S 
Sbjct: 202 YAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSS 261

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V ++L+ +Y+KCG  E A ++F  +   +   W +M+ A  Q  + +    LF EM  
Sbjct: 262 SFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +   F S+L A +    +  G++  S +   G        ++L+D+  ++G L++
Sbjct: 322 VGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQE 381

Query: 430 AIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           A+   K+MP R   S W AL++ C  + D +
Sbjct: 382 AVSVIKQMPMRPTESVWGALLTGCRIHKDTE 412



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 163/345 (47%), Gaps = 3/345 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           VS N LI+ Y K+     + ++F+    +++ +W+ +I  ++Q      A + F  M  D
Sbjct: 62  VSHN-LINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLND 120

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G  PD   + +    C     ++    VH   +K GY   + + +SLVD Y K   +  
Sbjct: 121 -GVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGD 179

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR +F EMP+++ VS++ +I G+A+     EA+ LF +        +DFTF++ +     
Sbjct: 180 ARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSS 239

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              + LG+ +H   +K +F  + FV +AL+ LYSK   +  A ++F E+P  +   +N M
Sbjct: 240 STFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSM 299

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +   A +   +    LF E+       +   F ++L   ++   ++ GR+  +       
Sbjct: 300 LIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGI 359

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
             E +   SLVD+  + G+ +EA  +   +    T   W A+++ 
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G QLH+ +++ G  +       L+++Y+K+     ++Q F E P+++  +W+++IS
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           A AQN      L+ F  M+  G +PD     S   AC         L+  +     + L 
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGF-------LRRSDVGKSVHCLA 152

Query: 511 PKKEHY------ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            K  +Y      +S+VD+  + G   +A  L  +MP E + + WS +I
Sbjct: 153 VKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGMI 199


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/642 (36%), Positives = 363/642 (56%), Gaps = 7/642 (1%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           + ++L   Y  +  +D AR+VF  +P  D+V +N L+ G +      EA++ F  M   G
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMVCDG 206

Query: 170 -FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
             +P   T A+ L A   +AD+ +GR VH+F  K    E+  V   L+ LYSK   V  A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R LF  M + D V+YN +I+ Y+ N     S+ LF EL       +      L+ V +  
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
               + + +H   + +   +   V+ ++  ++ +    E A++ F  +   +   W AMI
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           S Y Q G  E A+ LF +M + N+  +  T +S L A A+L +LSLGK LH  +      
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            NV+  +AL+DMYAK GS+ +A + F  M  +N+VSWNA+I+    +G     LK ++DM
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM 506

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           + +   P S + LSVL ACSH GL+EEG + F SMT  Y + P  EH   MVD+L R+G 
Sbjct: 507 LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566

Query: 529 FDEAEKLMAQMPFEP-DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             EA +L+++ P       +W +++ +C +HK+ + AK A+ +LF+++   ++  YV +S
Sbjct: 567 LKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDP-ENSGYYVLLS 625

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
           N++    Q+   + V++  + R + K   Y+ +E+ +K HVF A D  HPQ+  I   +E
Sbjct: 626 NLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLE 685

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            L  +M + GY+P+T  AL+D +EE K   +K HSE+LAIAF L++T  G+ I ++KNLR
Sbjct: 686 KLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLR 745

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            C DCH A K ISK+T R I VRD+SRFHHF+DG CSC D+W
Sbjct: 746 VCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 216/457 (47%), Gaps = 12/457 (2%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR++F+++     V W  L+ G S      EA + F  M  DG   PD  T A++L   +
Sbjct: 168 ARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLPAAA 223

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
           E         VH+   K G      +   L+  Y K   ++ AR +F  M + D V++NA
Sbjct: 224 EVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNA 283

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           LI+G++  G+   ++ LF E+  LG  P+  T  A +          L + +H FV+K+ 
Sbjct: 284 LISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSG 343

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  N  V+ A+  L+ + + +  ARK F  MPE    S+N MI+ YA N   + ++ LF 
Sbjct: 344 FTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFE 403

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           ++       +    S+ LS  A    L +G+ +H           V V  +L+DMYAKCG
Sbjct: 404 QMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCG 463

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
              EA+ IF  + + + V W AMI+ Y   G   EAL L+ +M  A++    ATF S+L 
Sbjct: 464 SISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLY 523

Query: 385 ASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           A +    +  G K   S          +   + ++D+  ++G LK+A +   E P+  + 
Sbjct: 524 ACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVG 583

Query: 444 S--WNALISACAQNGDAQ----ATLKSFE-DMVQSGY 473
              W AL+ AC  + D+     A+ K FE D   SGY
Sbjct: 584 PGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGY 620



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LIS Y K G++ +AR LF+ M     V++  LI GYS       +  LF ++ T G   P
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLW-P 311

Query: 72  DYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           +  T   L+     P   + L Q +H  ++K G+ +   +  ++   +C++  ++ AR+ 
Sbjct: 312 NSSTLVALIP-VHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  MP+K   S+NA+I+G+A+ GL E A+ LF +M  L  +P+  T ++ LSA   L  +
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +LG+ +H  + + +   NV+V  AL+D+Y+K   + EAR++F  M   + VS+N MI  Y
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE- 309
             + Q  E+LKL++++       +   F ++L   ++   ++ G ++        AI+  
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPG 550

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP--WTAMISA 350
           ++    +VD+  + G+ +EA E+ +     +  P  W A++ A
Sbjct: 551 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGA 593



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 225/493 (45%), Gaps = 35/493 (7%)

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL- 187
           R+F+  P+ D    NAL+                +  + L   P  F+FA A ++   L 
Sbjct: 73  RLFRGFPRPDRFLRNALLRSLPS-----------LRPRLLFPCPDSFSFAFAATSLAALC 121

Query: 188 ------ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
                 A  +  R +HA  V   +  + FVA+AL  LY     V  ARK+F  +P  D V
Sbjct: 122 SRGGGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTV 181

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRF--DRSQFPFSTLLSVV----ANKLDLQIGR 295
            +N ++   + +E  +          F R   D S  P +T L+ V    A   D+ +GR
Sbjct: 182 LWNTLLAGLSGSEAVE---------SFARMVCDGSVRPDATTLASVLPAAAEVADVTMGR 232

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
            +H+            V   L+ +Y+KCG  E A+ +F  +     V + A+IS Y   G
Sbjct: 233 CVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNG 292

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
            +  ++NLF E+    +  + +T  +++   +      L + LH FV++SGF +N    +
Sbjct: 293 MVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVST 352

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           A+  ++ +   ++ A + F  MPE+ + SWNA+IS  AQNG  +  +  FE MV+   +P
Sbjct: 353 AITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRP 412

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + +++ S LSAC+  G +  G ++ + +  +  L P      +++D+  + G   EA ++
Sbjct: 413 NPITISSTLSACAQLGALSLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRI 471

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
              M    + + W+++I    +H     A K    +     L  +A ++++    +  G 
Sbjct: 472 FNTMD-NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGL 530

Query: 596 WESVSQVKKAMRE 608
            E   +V ++M +
Sbjct: 531 VEEGWKVFRSMTD 543



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 1/179 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N+  +  + + + +  ++ +AR+ F++M ++T  SW  +I GY+Q      A  LF  M 
Sbjct: 347 NSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQM- 405

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 P+ +T ++ LS C++    +    +H  I +      + +  +L+D Y K   +
Sbjct: 406 VKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSI 465

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             ARR+F  M  K+ VS+NA+I G+   G   EA+KL+ +M      P+  TF + L A
Sbjct: 466 SEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYA 524



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N      LI  Y K G+++ AR +FN+M ++  VSW  +I GY    Q  EA KL+ DM 
Sbjct: 448 NVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM- 506

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKIRC 123
            D    P   TF ++L  CS      E  +V   +   +  N  +  C  +VD   +   
Sbjct: 507 LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566

Query: 124 LDLARRVFKEMPQ 136
           L  A  +  E P+
Sbjct: 567 LKEAFELISEFPK 579


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/693 (35%), Positives = 399/693 (57%), Gaps = 20/693 (2%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D     +L++ C++     E  ++H  +I  G+ + + +  +L+  Y K   LD A+RVF
Sbjct: 9   DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + M  KD  +++++I+ +A+ G  E A+ L+  M   G +P+  TFA AL     +A +A
Sbjct: 69  EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 128

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR +H  ++ +   ++  + ++LL++Y K D +VEARK+F  M   +  SY  MI+ Y 
Sbjct: 129 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 188

Query: 252 WNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
              ++ E+L+LF  + +    + + + F+T+L  V    +L+ GR++H         + V
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V N+LV MY KCG   EA+++F +++  + + WT+MI+AY Q GN +EALNLF  M   
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM--- 305

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           ++     +F+S L A A L +L  G+++H  V+ +   S     ++LL MYA+ GSL DA
Sbjct: 306 DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME-TSLLSMYARCGSLDDA 364

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F  M  R+  S NA+I+A  Q+G  +  L+ +  M Q G   D ++ +SVL ACSH 
Sbjct: 365 RRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHT 424

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            L+ +   +F S+   + + P  EHY  MVD+L RSG   +AE+L+  MP++ D + W +
Sbjct: 425 SLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMT 484

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           +++ C+ H +L   ++AA ++F++    +  PYV +SN+YA A +++   +V+K M ERG
Sbjct: 485 LLSGCKRHGDLNRGERAARKVFELAPA-ETLPYVFLSNMYAAAKRFDDARRVRKEMEERG 543

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN-------LMQEMKKEGYKPDTS 663
           V    A S++E+ +++H+FT+      Q     R +E        L++ MK+ GY PDT 
Sbjct: 544 VTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTR 603

Query: 664 CALHDED----EEIKVESLKYHSERLAIAFALI--NTPEGS-PILVMKNLRACTDCHAAI 716
               ++     EE K  SL +HSERLAIA+ LI    P+ S P+ V+ + R C+DCH+AI
Sbjct: 604 EVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAI 663

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KL+S I  + I VRD +RFHHF+ G CSC D W
Sbjct: 664 KLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 240/462 (51%), Gaps = 12/462 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G+L  A+ +F  M  +   +W+ +I  Y++  +   A  L+  M  + G +P
Sbjct: 51  LLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAE-GVEP 109

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VTFA  L GC+      +   +H  I+        ++ +SL++ Y K   +  AR+VF
Sbjct: 110 NVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVF 169

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADI 190
           + M  ++  S+ A+I+ + + G + EA++LF  M  +   +P+ +TFA  L A  GL ++
Sbjct: 170 EGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNL 229

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             GR+VH  +    F  NV V NAL+ +Y K    VEARK+F  M   + +S+  MI  Y
Sbjct: 230 EKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAY 289

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A +   +E+L LF+ +     + S   FS+ L+  A    L  GR+IH   +V   ++  
Sbjct: 290 AQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIH-HRVVEAHLASP 345

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           ++  SL+ MYA+CG  ++A+ +F  +         AMI+A+ Q G  ++AL ++  M + 
Sbjct: 346 QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQE 405

Query: 371 NISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            I AD  TF S+L A +  + ++  +    S V+  G +  V     ++D+  +SG L D
Sbjct: 406 GIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGD 465

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQNGD----AQATLKSFE 466
           A +  + MP + + V+W  L+S C ++GD     +A  K FE
Sbjct: 466 AEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFE 507



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 200/376 (53%), Gaps = 6/376 (1%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M+  G     F   + ++A   L  +  GR++H  ++ T F  ++ +  ALL +Y+K   
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A+++F  M   D  +++ +I+ YA   + + ++ L+R +     + +   F+  L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A+   L  GR IH + + +    +  + +SL++MY KC    EA+++F  +   +   +
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQLHSFVI 403
           TAMISAYVQ G   EAL LF  M +   I  +  TFA+IL A   L +L  G+++H  + 
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
             GF +NV   +AL+ MY K GS  +A + F  M  RN++SW ++I+A AQ+G+ Q  L 
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALN 300

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F+ M     +P  VS  S L+AC+  G ++EG +  + + + +   P+ E   S++ + 
Sbjct: 301 LFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMY 355

Query: 524 CRSGCFDEAEKLMAQM 539
            R G  D+A ++  +M
Sbjct: 356 ARCGSLDDARRVFNRM 371



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 226/504 (44%), Gaps = 75/504 (14%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ V  + L++ Y+K   +  AR++F  M  R   S+T +I  Y Q  +  EA +LF  M
Sbjct: 144 QDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRM 203

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                 +P+  TFAT+L          +  +VH  +   G+++ +++ N+LV  Y K   
Sbjct: 204 SKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGS 263

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
              AR+VF  M  ++ +S+ ++I  +A+ G  +EA+ LF  M     +PS  +F++AL+A
Sbjct: 264 PVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNA 320

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +  GR++H  VV+ +   +  +  +LL +Y++   + +AR++F  M   D  S 
Sbjct: 321 CALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSC 379

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL------SVVANKLDLQIGRQI 297
           N MI  +  + + K++L+++R ++          F ++L      S+VA+  D       
Sbjct: 380 NAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDF-----F 434

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGN 356
            +  +    +  V+    +VD+  + GR  +A+E+   + +    V W  ++S   + G+
Sbjct: 435 QSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGD 494

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           L                          RA+ ++  L+  + L  +V    F+SN      
Sbjct: 495 LNRG----------------------ERAARKVFELAPAETL-PYV----FLSN------ 521

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNI-----VSW----NALISACAQNGDAQAT------ 461
              MYA +    DA +  KEM ER +     VS+    N L    +   D Q        
Sbjct: 522 ---MYAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRT 578

Query: 462 --------LKSFEDMVQSGYQPDS 477
                   L+  E M Q+GY PD+
Sbjct: 579 MERVRSLLLELLEPMKQAGYVPDT 602


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 361/611 (59%), Gaps = 24/611 (3%)

Query: 162 FVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
            ++M   GF      + A L+  V       G++VHA ++KT ++ +VF+   L+ LY+K
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 290

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF--------------RELQ 267
            D + +A  +F EMPE + VS+  MI+ Y+      ++L LF               +L+
Sbjct: 291 CDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLK 350

Query: 268 FTRFDR-------SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
            +  +R       ++F F+T+L+   + L   +GRQIH+  I       V V +SL+DMY
Sbjct: 351 LSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMY 410

Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
           AK G+  EA+ +F  L     V  TA+IS Y Q G  EEAL LF  +    + ++  T+ 
Sbjct: 411 AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYT 470

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
            +L A + LA+L LGKQ+H+ V+RS   S V   ++L+DMY+K G+L  + + F  M ER
Sbjct: 471 GVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYER 530

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            ++SWNA++   +++G+ +  LK F  M + +  +PDSV++L+VLS CSH GL ++GL  
Sbjct: 531 TVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNI 590

Query: 500 FNSMTQ-KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           FN M+  K ++ PK EHY  +VD+L RSG  +EA + + +MPFEP   +W S++ +CR+H
Sbjct: 591 FNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 650

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            N++  + A  QL ++E   +A  YV +SN+YA AG+WE VS ++  M ++ V K    S
Sbjct: 651 SNVDIGEFAGQQLLEIEP-GNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRS 709

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
            +EL   +H F A+D  HP+  EI  K++ L    K+ GY PD SC LHD DEE K + L
Sbjct: 710 SIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKIL 769

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
             HSE+LA++F LI +P   PI V+KNLR C DCH   K ISK+ GRE+++RD +RFH  
Sbjct: 770 LGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRI 829

Query: 739 KDGFCSCRDFW 749
             G CSC D+W
Sbjct: 830 VGGKCSCEDYW 840



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 205/412 (49%), Gaps = 29/412 (7%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  +  +L+ C       E  +VHA +IK  Y   + +   L+  Y K   L  A
Sbjct: 238 GFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDA 297

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF---VEMQHLGF-------------- 170
             VF EMP+++ VS+ A+I+ +++ G   +A+ LF   V++   G               
Sbjct: 298 HNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRP 357

Query: 171 ----KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
               +P++FTFA  L++        LGRQ+H+ ++K N+ ++VFV ++LLD+Y+K   + 
Sbjct: 358 WVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH 417

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           EAR +F  +PE D VS   +I+ YA     +E+L+LFR LQ      +   ++ +L+ ++
Sbjct: 418 EARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               L +G+Q+H   + +   S V + NSL+DMY+KCG    ++ IF  +   + + W A
Sbjct: 478 GLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 537

Query: 347 MISAYVQKGNLEEALNLFIEMC-RANISADQATFASILRASA----ELASLSLGKQLHSF 401
           M+  Y + G   E L LF  M     +  D  T  ++L   +    E   L++   + S 
Sbjct: 538 MLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSG 597

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            I       +     ++D+  +SG +++A +  K+MP E     W +L+ AC
Sbjct: 598 KIE--VEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 647



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 183/363 (50%), Gaps = 24/363 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF---VDMRTDG- 67
           LI  Y K  +L  A  +F+ M +R  VSWT +I  YSQ+    +A  LF   V +   G 
Sbjct: 284 LIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGV 343

Query: 68  ----------------GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
                            ++P+  TFAT+L+ C+         Q+H+ IIK  Y   + + 
Sbjct: 344 YAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVG 403

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           +SL+D Y K   +  AR VF+ +P++D VS  A+I+G+A+ GL+EEA++LF  +Q  G K
Sbjct: 404 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 463

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
            +  T+   L+A  GLA + LG+QVH  V+++     V + N+L+D+YSK   +  +R++
Sbjct: 464 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 523

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLD 290
           F  M E   +S+N M+  Y+ + + +E LKLF  + + T+          +LS  ++   
Sbjct: 524 FDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGL 583

Query: 291 LQIGRQIHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAM 347
              G  I           E K+ +   +VD+  + GR EEA E    +    T   W ++
Sbjct: 584 EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSL 643

Query: 348 ISA 350
           + A
Sbjct: 644 LGA 646



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N LI  Y K GNL  +R +F++M +RT +SW  ++ GYS+  + RE  KLF  MR 
Sbjct: 501 VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMRE 560

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           +    PD VT   +LSGCS     ++ + +  D+
Sbjct: 561 ETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDM 594


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/742 (31%), Positives = 392/742 (52%), Gaps = 80/742 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y   G+L   R +F++M  +    W  ++  Y++   F+E+  LF  M   G    
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 57

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                   + G    ++A+EL                                      F
Sbjct: 58  --------IEG-KRSESASEL--------------------------------------F 70

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-- 189
            ++  +D +S+N++I+G+   GL E  + ++ +M +LG    D   A  +S  VG A   
Sbjct: 71  DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI---DVDLATIISVLVGCAKSG 127

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            ++LG+ VH+  +K++F   +  +N LLD+YSK   +  A ++F +M E + VS+  MI 
Sbjct: 128 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 187

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  +     ++ L ++++           +++L   A    L  G+ +H         S
Sbjct: 188 GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 247

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V N+L+DMYAKCG  E A  +F+ +     + W  M+                    
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-------------------- 287

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T A IL A A L++L  GK++H +++R+G+ S+    +AL+D+Y K G L 
Sbjct: 288 -GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 346

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  +P +++VSW  +I+    +G     + +F +M  +G +PD VS +S+L ACS
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+E+G ++F  M   + + PK EHYA MVD+L R+G   +A K +  +P  PD  +W
Sbjct: 407 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 466

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++  CRI+ ++E A+K A+++F++E   +   YV ++NIYA A +WE V ++++ + +
Sbjct: 467 GALLCGCRIYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKWEEVKRMREKIGK 525

Query: 609 RGVRKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +G+RK    SW+E+K +V++F + N+  HP + +I   ++ + ++MK+EGY P T  AL 
Sbjct: 526 KGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 585

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF L+  P    I V KNLR C DCH   K +SK T REI
Sbjct: 586 NADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREI 645

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDS+RFHHFKDG+CSCR FW
Sbjct: 646 VLRDSNRFHHFKDGYCSCRGFW 667



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 232/510 (45%), Gaps = 52/510 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLA--------------------TARELFNSMVDRTAVSW 40
           M  +N    N ++S Y K G+                      +A ELF+ + DR  +SW
Sbjct: 22  MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISW 81

Query: 41  TILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
             +I GY           ++  M   G  D D  T  ++L GC++  T +    VH+  I
Sbjct: 82  NSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCAKSGTLSLGKAVHSLAI 140

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           K  +   +   N+L+D Y K   LD A RVF++M +++ VS+ ++I G+ ++G ++ AI 
Sbjct: 141 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 200

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L  +M+  G K       + L A      +  G+ VH ++   N   N+FV NAL+D+Y+
Sbjct: 201 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 260

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +  A  +F  M   D +S+N M+                 EL+           + 
Sbjct: 261 KCGSMEGANSVFSTMVVKDIISWNTMVG----------------ELK-----PDSRTMAC 299

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A+   L+ G++IH   +     S+  VAN+LVD+Y KCG    A+ +F  +    
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT MI+ Y   G   EA+  F EM  A I  D+ +F SIL A +    L  G +   
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF- 418

Query: 401 FVIRSGFM--SNVFSGSALLDMYAKSGSLKDA---IQTFKEMPERNIVSWNALISACAQN 455
           +++++ F     +   + ++D+ +++G+L  A   I+T    P+  I  W AL+  C   
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI--WGALLCGCRIY 476

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            D +   K  E + +   +P++     +L+
Sbjct: 477 HDIELAEKVAERVFE--LEPENTGYYVLLA 504


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/573 (38%), Positives = 344/573 (60%), Gaps = 2/573 (0%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A+ L + V    I  G+Q+HA + +     N  +A  L++LY   + +  A  LF  + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + +   +NVMI  YAWN  Y+ ++ L+ +++       +F F  +L   +    ++ G++
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH   I +   S+V V  +L+DMYAKCG  E A+++F  +     V W +M++ Y Q G 
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            +E+L L   M    +   + TF   + ASA+   L  GK+LH +  R GF SN    +A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMYAKSGS+  A   F+ + E+ +VSWNA+I+  A +G A   L  F++M +    PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPD 302

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            ++ + VL+ACSH GL+ EG  +F SM   + + P  +HY  M+D+L   G  +EA KL+
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            +M  EPD  +W ++++SC+IH N+E  + A ++L ++E   D   YV +SN+YA AG+W
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEP-DDGGNYVILSNMYAQAGKW 421

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V++++  M  +G++K  A SW+E+ +KVH F + D  HP++  I  +++   + MK+ 
Sbjct: 422 DGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEA 481

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY P      HD +++ KV+ +  HSERLAIAF LI+T  G+ +L++KNLR C DCH AI
Sbjct: 482 GYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAI 541

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K ISKIT REIT+RD +R+HHFKDG CSC DFW
Sbjct: 542 KFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 204/414 (49%), Gaps = 9/414 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A+LL  C          Q+HA I + G +   ++   LV+ YC    L  A  +F  + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++   +N +I G+A  G  E AI L+ +M+  G  P  FTF   L A   L+ +  G++
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V+++    +VFV  AL+D+Y+K  CV  AR++F ++ E D V +N M+  Y+ N Q
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             ESL L R + F     ++  F   ++  A+   L  G+++H  +      S  KV  +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+DMYAK G    A+ +F  L     V W AMI+ Y   G+  EAL+LF EM +  +  D
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPD 302

Query: 376 QATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             TF  +L A +    L+ GK    S +        V   + ++D+    G L++A +  
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 435 KEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            EM   P+  +  W AL+ +C  +G+ +    + E +V+   +PD      +LS
Sbjct: 363 MEMRVEPDAGV--WGALLHSCKIHGNVEMGELALEKLVE--LEPDDGGNYVILS 412



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 181/357 (50%), Gaps = 6/357 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +    L++ Y    +L  A  LF+ +  R    W ++I GY+    +  A  L+  MR
Sbjct: 35  NPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMR 94

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD  TF  +L  CS      E  ++H D+I+ G  S + +  +L+D Y K  C+
Sbjct: 95  -DYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCV 153

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR+VF ++ ++D V +N+++  +++ G  +E++ L   M   G KP++ TF  +++A 
Sbjct: 154 ESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAAS 213

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                +  G+++H +  +  F  N  V  AL+D+Y+K   V  AR LF  + E   VS+N
Sbjct: 214 ADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWN 273

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MIT YA +    E+L LF+E++  +       F  +L+  ++   L  G+ +H +++++
Sbjct: 274 AMITGYAMHGHANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGLLNEGK-MHFRSMIS 331

Query: 305 --TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                  V+    ++D+   CGR EEA ++   +        W A++ +    GN+E
Sbjct: 332 DFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVE 388


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/558 (39%), Positives = 338/558 (60%), Gaps = 5/558 (0%)

Query: 194  RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            RQVH        ++N+ VAN L+  YS +  + +A  LF  M   D VS++VM+  +A  
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 254  EQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              Y      FREL     R D    PF  ++    +  +LQ+GR IH          +  
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPF--VIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 872

Query: 312  VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
            V  +LVDMY KC   E+A+ +F  +     V WT MI  Y + GN  E+L LF +M    
Sbjct: 873  VCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 932

Query: 372  ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
            +  D+    +++ A A+L ++   + +  ++ R  F  +V  G+A++DM+AK G ++ A 
Sbjct: 933  VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 992

Query: 432  QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
            + F  M E+N++SW+A+I+A   +G  +  L  F  M++SG  P+ ++L+S+L ACSH G
Sbjct: 993  EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 1052

Query: 492  LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            L+EEGL++F+ M + Y +R   +HY  +VD+L R+G  DEA KL+  M  E DE +W + 
Sbjct: 1053 LVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112

Query: 552  INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
            + +CR HK++  A+KAA  L +++  ++   Y+ +SNIYA AG+WE V++++  M +R +
Sbjct: 1113 LGACRTHKDVXLAEKAATSLLELQP-QNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRL 1171

Query: 612  RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            +K+  ++W+E+ +K H F+  D  HP++ EI   +++L  +++  GY PDT+  LHD DE
Sbjct: 1172 KKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDE 1231

Query: 672  EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
            E+K+  L  HSE+LAIAF LI TPE +PI ++KNLR C DCH   KL+S ITGR I VRD
Sbjct: 1232 ELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRD 1291

Query: 732  SSRFHHFKDGFCSCRDFW 749
            ++RFHHFK+G CSC D+W
Sbjct: 1292 ANRFHHFKEGACSCGDYW 1309



 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 310/529 (58%), Gaps = 5/529 (0%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +SA V   ++   RQVHA       +EN+ VAN L+  YS +  + +A  LF  M   D 
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           VS++VM+  +A    Y      FREL     R D    PF  ++    +  +LQ+GR IH
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPF--VIRACRDLKNLQMGRLIH 183

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
                     +  V  +LVDMY KC   E+A+ +F  +     V WT MI  Y + G   
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           E+L LF +M    +  D+    +++ A A+L ++   + +  ++ R  F  +V  G+A++
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 303

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMYAK G ++ A + F  M E+N++SW+A+I+A   +G  +  L  F  M+ SG  PD +
Sbjct: 304 DMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKI 363

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           +L S+L ACSH GL+EEGL++F+SM + Y +R   +HY  +VD+L R+G  DEA KL+  
Sbjct: 364 TLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKS 423

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           M  E DE +W + + +CR HK++  A+KAA  L +++  ++   YV +SNIYA AG+WE 
Sbjct: 424 MTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQS-QNPGHYVLLSNIYANAGRWED 482

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
           V++++  M +R ++K   ++W+E+ +K H F+  D  HP++ EI   +++L  +++  GY
Sbjct: 483 VAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGY 542

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            PDT+  LHD DEE+K+  L  HSE+LAIAF LI TPE +PI ++KNLR
Sbjct: 543 VPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 202/424 (47%), Gaps = 5/424 (1%)

Query: 86   PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
            P    ++ QVH      G    LI+ N LV  Y   R LD A  +F  M  +DSVS++ +
Sbjct: 748  PTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVM 807

Query: 146  ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
            + GFAK G        F E+   G +P ++T    + A   L ++ +GR +H  V K   
Sbjct: 808  VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867

Query: 206  VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
              + FV  AL+D+Y K   + +AR LF +M E D V++ VMI  YA      ESL LF +
Sbjct: 868  DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927

Query: 266  LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
            ++       +    T++   A    +   R I           +V +  +++DM+AKCG 
Sbjct: 928  MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987

Query: 326  FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             E A+EIF  +   + + W+AMI+AY   G   +AL+LF  M R+ I  ++ T  S+L A
Sbjct: 988  VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047

Query: 386  SAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIV 443
             +    +  G +  S +        +V   + ++D+  ++G L +A++    M  E++  
Sbjct: 1048 CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEG 1107

Query: 444  SWNALISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNS 502
             W A + AC  + D     K+   +++   Q P    LLS + A  + G  E+  +  + 
Sbjct: 1108 LWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYA--NAGRWEDVAKIRDL 1165

Query: 503  MTQK 506
            M+Q+
Sbjct: 1166 MSQR 1169



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 203/416 (48%), Gaps = 5/416 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           QVHA     G    +++ N L+  Y   R LD A  +F  M  +DSVS++ ++ GFAK G
Sbjct: 80  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
                   F E+   G +P ++T    + A   L ++ +GR +H  V K     + FV  
Sbjct: 140 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 199

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+D+Y K   + +AR LF +M E D V++ VMI  YA   +  ESL LF +++      
Sbjct: 200 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 259

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +    T++   A    +   R I           +V +  +++DMYAKCG  E A+EIF
Sbjct: 260 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 319

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   + + W+AMI+AY   G   +AL+LF  M  + +  D+ T AS+L A +    + 
Sbjct: 320 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVE 379

Query: 394 LGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
            G +  S +       ++V   + ++D+  ++G L +A++  K M  E++   W A + A
Sbjct: 380 EGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439

Query: 452 CAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           C  + D     K+   +++   Q P    LLS + A  + G  E+  +  + M+Q+
Sbjct: 440 CRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYA--NAGRWEDVAKIRDLMSQR 493



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 170/335 (50%), Gaps = 2/335 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N V  N LI  Y     L  A  LF+ M  R +VSW++++GG+++   +   F  F ++
Sbjct: 92  ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 151

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G+ PD  T   ++  C +         +H  + KFG +    +C +LVD Y K R 
Sbjct: 152 -IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCRE 210

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ AR +F +M ++D V++  +I G+A+ G   E++ LF +M+  G  P        + A
Sbjct: 211 IEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 270

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +   R +  ++ +  F  +V +  A++D+Y+K  CV  AR++F  M E + +S+
Sbjct: 271 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 330

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI  Y ++ Q +++L LF  +  +     +   ++LL   ++   ++ G +  +    
Sbjct: 331 SAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWE 390

Query: 304 TTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
             ++ ++VK    +VD+  + GR +EA ++  +++
Sbjct: 391 DYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 169/335 (50%), Gaps = 2/335 (0%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            QN +  N L+  Y     L  A  LF+ M  R +VSW++++GG+++   +   F  F ++
Sbjct: 768  QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
                G+ PD  T   ++  C +         +H  + KFG +    +C +LVD Y K R 
Sbjct: 828  -IRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE 886

Query: 124  LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            ++ AR +F +M ++D V++  +I G+A+ G   E++ LF +M+  G  P        + A
Sbjct: 887  IEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA 946

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
               L  +   R +  ++ +  F  +V +  A++D+++K  CV  AR++F  M E + +S+
Sbjct: 947  CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 1006

Query: 244  NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            + MI  Y ++ Q +++L LF  +  +    ++    +LL   ++   ++ G +  +    
Sbjct: 1007 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE 1066

Query: 304  TTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              ++  +VK    +VD+  + GR +EA ++  +++
Sbjct: 1067 DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT 1101


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/648 (35%), Positives = 372/648 (57%), Gaps = 17/648 (2%)

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFT 176
           Y K   LDLA  VF  M  ++ VS+ AL+ GF + G     ++L  EM+      P+++T
Sbjct: 2   YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYT 61

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +A+L A   + D A G  +H   V+  + E+  VA++L+ +YSK   + +AR++F    
Sbjct: 62  LSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAG 121

Query: 237 EVDGV-SYNVMITCYAWNEQYKESLKLFRELQF--TRFDRSQFPFSTLLSVVANKLDLQI 293
              G+ ++N M++ YA     +++L +FRE++    +    +F F++LL   +     + 
Sbjct: 122 LGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATRE 181

Query: 294 GRQIHTQTIVT--TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           G Q+H     +  +  S   +A +LVDMY KC R   A ++F  L   + + WTA++  +
Sbjct: 182 GAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGH 241

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q+G + EAL LF    R+    D    +S++   A+ A +  G+Q+H + I+    ++V
Sbjct: 242 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDV 301

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
            +G++++DMY K G   +A + F+EM   N+VSW  +++   ++G  +  +  FE+M   
Sbjct: 302 SAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 361

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +PD V+ L++LSACSH GL++E  +YF+ + +   +RPK EHYA MVD+L R+G   E
Sbjct: 362 GVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELRE 421

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+  MP EP   +W +++++CR+HK++   ++A D L  M+   +   YV +SN+ A
Sbjct: 422 ARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDG-DNPVNYVTLSNVLA 480

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF---TANDELHPQTNEIRRKIEN 648
            AG+W    +V+ AMR RG++K    SWVE+  +VH F      +E HPQ  +IRR + +
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 649 LMQEMKKE-GYKPDTS-CALHDEDEEIKVESLKYHSERLAIAFALI-----NTPEGSPIL 701
           +   M+++ GY  D +  ALHD DEE + ESL+ HSERLA+   L+         G PI 
Sbjct: 541 METRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIR 600

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           V KNLR C DCH   K +S +  R + VRD++RFH F+ G CSC+D+W
Sbjct: 601 VYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 228/450 (50%), Gaps = 9/450 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP-DYV 74
           YVK G L  A E+F  M DR  VSWT L+ G+ +        +L  +MRT   + P +Y 
Sbjct: 2   YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYT 61

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
             A+L + C   DTA   + +H   ++ GY    ++ +SLV  Y K   +  ARRVF   
Sbjct: 62  LSASLKACCVVGDTAAG-VGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 135 PQKDSV-SFNALITGFAKEGLNEEAIKLFVEM-QHLG-FKPSDFTFAAALSAGVGLADIA 191
                + ++NA+++G+A  G   +A+ +F EM +H G  +P +FTFA+ L A  GL    
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 192 LGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            G QVHA +  + F    N  +A AL+D+Y K   +  A ++F  +   + + +  ++  
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A   Q  E+L+LFR    +         S+++ V+A+   ++ GRQ+H   I     ++
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V   NS+VDMY KCG  +EA+ +F  +   + V WT M++   + G   EA+ LF EM  
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLK 428
             +  D+ T+ ++L A +    +   ++  S + R   +       A ++D+  ++G L+
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +A    + MP E  +  W  L+SAC  + D
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKD 450



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 175/357 (49%), Gaps = 12/357 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFV 61
            ++ V  + L+  Y K G +  AR +F+     + + +W  ++ GY+     R+A  +F 
Sbjct: 91  QEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFR 150

Query: 62  DMRT-DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN--SILIICNSLVDSY 118
           +MR  +G   PD  TFA+LL  CS      E  QVHA +   G++  S  I+  +LVD Y
Sbjct: 151 EMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMY 210

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K R L +A +VF+ + +K+ + + A++ G A+EG   EA++LF      G +P     +
Sbjct: 211 VKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLS 270

Query: 179 AALSAGVGLADIAL---GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           + +     LAD AL   GRQVH + +K     +V   N+++D+Y K     EA ++F EM
Sbjct: 271 SVVGV---LADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREM 327

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIG 294
              + VS+  M+     +   +E++ LF E++    +  +  +  LLS  ++  L  +  
Sbjct: 328 RAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECR 387

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           R         T   + +    +VD+  + G   EA+++   +    TV  W  ++SA
Sbjct: 388 RYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 444



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 4/190 (2%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA-DQA 377
           MY KCG  + A E+F  +   + V WTA++  +++ G+    L L  EM  A+ +A ++ 
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T ++ L+A   +   + G  +H   +R+G+  +    S+L+ +Y+K G + DA + F   
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 438 P-ERNIVSWNALISACAQNGDAQATLKSFEDMV--QSGYQPDSVSLLSVLSACSHCGLIE 494
                I +WNA++S  A  G  +  L  F +M   +  +QPD  +  S+L ACS  G   
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 495 EGLQYFNSMT 504
           EG Q   +MT
Sbjct: 181 EGAQVHAAMT 190


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/721 (33%), Positives = 395/721 (54%), Gaps = 39/721 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N +I  Y  S  L+ A +LF S   +  +SW  LI GY +     EAF LF
Sbjct: 54  MPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLF 113

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M++DG   P+  T  ++L  C+         Q+H   IK G++  + + N L+  Y +
Sbjct: 114 WEMQSDG-IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172

Query: 121 IRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            + +  A  +F+ M  +K++V++ +++TG+++ G   +AI+ F +++  G + + +TF +
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPS 232

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++   +G QVH  +VK+ F  N++V +AL+D+Y+K   +  AR L   M   D
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD 292

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA-NKLDLQIGRQIH 298
            VS+N MI          E+L +F  +         F   ++L+  A ++ +++I    H
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              + T   +   V N+LVDMYAK G  + A ++F  +     + WTA+++     G+ +
Sbjct: 353 CLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD 412

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF  M    I+ D+   AS+L ASAEL  L  G+Q+H   I+SGF S++   ++L+
Sbjct: 413 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 472

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MY K GSL+DA   F  M  R++++W  LI   A+NG                      
Sbjct: 473 TMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------------------- 510

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
                        L+E+  +YF+SM   Y + P  EHYA M+D+  RSG F + E+L+ Q
Sbjct: 511 -------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQ 557

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           M  EPD  +W +++ + R H N+E  ++AA  L ++E   +A PYV +SN+Y+ AG+ + 
Sbjct: 558 MEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP-NNAVPYVQLSNMYSAAGRQDE 616

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + V++ M+ R + K    SWVE K KVH F + D  HP+  EI  K++ +M  +K+ GY
Sbjct: 617 AANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 676

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
             D S ALHD D+E K   L YHSE+LA+AF L+  P G+PI ++KNLR C DCH+A+KL
Sbjct: 677 FADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKL 736

Query: 719 I 719
           +
Sbjct: 737 L 737



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 219/484 (45%), Gaps = 71/484 (14%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  +H++  +T    N+     LL   SK   V EAR++F +MPE D  ++N MI  Y+
Sbjct: 16  FGSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70

Query: 252 WNEQYKESLKLFR-------------------------------ELQFTRFDRSQFPFST 280
            + +  ++ KLFR                               E+Q      +++   +
Sbjct: 71  NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-SHI 339
           +L +  + + L  G QIH  TI T    +V V N L+ MYA+C R  EA+ +F  +    
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
           + V WT+M++ Y Q G   +A+  F ++ R    ++Q TF S+L A A +++  +G Q+H
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
             +++SGF +N++  SAL+DMYAK   ++ A    + M   ++VSWN++I  C + G   
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVL------------SACSHCGLIEEGLQYF----NSM 503
             L  F  M +   + D  ++ S+L            ++ +HC +++ G   +    N++
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNAL 370

Query: 504 TQKYKLRPKKE---------------HYASMVDILCRSGCFDEAEKLMAQM---PFEPDE 545
              Y  R   +                + ++V     +G +DEA KL   M      PD+
Sbjct: 371 VDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDK 430

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           I+ +SV+++      LEF ++      K       +   ++  +Y   G  E  + +  +
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS 490

Query: 606 MRER 609
           M  R
Sbjct: 491 MEIR 494


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/511 (39%), Positives = 321/511 (62%), Gaps = 1/511 (0%)

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           D VS+N +I         +++L  F++++       ++   ++L+  A+   +Q    +H
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              I T   +   V N+L+DMYAK G+ + A  +F+ +     V WT++++ Y   G+ E
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EA+ LF +M  + +  DQ   AS+L A AEL  +  G+Q+H+ +++SG  S++   ++L+
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MYAK GS+ DA + F  MP R+++SW ALI   AQNG  + +L+ ++ M+ +G +PD +
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + + +L ACSH GL+  G  YF +M + Y ++P  EHYA M+D+L RSG   EA+ L+ Q
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           M   PD ++W +++ +CR+HK LE  + AA  LF++E + ++ PYV +SN+Y+ AG+WE 
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPM-NSMPYVMLSNMYSAAGKWED 363

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            +++++ MR RG+ K   YSW+E  SKV  F + D  HP  NEI  KI+ ++  +K+ GY
Sbjct: 364 AARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGY 423

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            PD S ALHD D+E+K   L YHSE+LA+AF L+  P+G+PI + KNLR C DCH A+K 
Sbjct: 424 VPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKY 483

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            SK+  R I +RDS+ FHHF +G CSC D+W
Sbjct: 484 TSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 160/321 (49%), Gaps = 2/321 (0%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           M   D VS+N+LI G  +EG  E+A+  F +M+    K  ++T  + L++   +  +   
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
             VH  ++KT F     V NAL+D+Y+K   +  A  +F +M + D VS+  ++T Y+ N
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             Y+E++KLF +++ +     Q   +++LS  A    +  G+QIH   + +   S + V 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           NSLV MYAKCG   +A   F N+     + WTA+I  Y Q G  + +L  + +M      
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            D  TF  +L A +    L  G+     + +  G        + ++D+  +SG L +A  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 433 TFKEM-PERNIVSWNALISAC 452
              +M    + V W AL++AC
Sbjct: 301 LLNQMVVAPDAVVWKALLAAC 321



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 7/333 (2%)

Query: 38  VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHA 97
           VSW  LI G  ++    +A   F  MR+      +Y T  ++L+  +        I VH 
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEY-TLPSVLNSFASMKVMQNAISVHC 65

Query: 98  DIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
            IIK G+ +  ++ N+L+D Y K   LD A  VF +M  KD VS+ +L+TG++  G  EE
Sbjct: 66  LIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEE 125

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           AIKLF +M+  G  P     A+ LSA   L  +  G+Q+HA +VK+    ++ V N+L+ 
Sbjct: 126 AIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVT 185

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y+K   +V+A + F  MP  D +S+  +I  YA N + K SL+ + ++  T        
Sbjct: 186 MYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYIT 245

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANL 336
           F  LL   ++   L  GR           I       + ++D+  + G+  EAK +   +
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM 305

Query: 337 -SHISTVPWTAMISAYVQKGNLE----EALNLF 364
                 V W A+++A      LE     A NLF
Sbjct: 306 VVAPDAVVWKALLAACRVHKELELGEMAAKNLF 338



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  A  +F+ MVD+  VSWT L+ GYS    + EA KLF  MR   G 
Sbjct: 80  NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRIS-GV 138

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +  A++LS C+E    +   Q+HA ++K G  S L + NSLV  Y K   +  A R
Sbjct: 139 YPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANR 198

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F  MP +D +S+ ALI G+A+ G  + +++ + +M   G KP   TF   L A      
Sbjct: 199 AFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGL 258

Query: 190 IALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEM 235
           +  GR     + K   ++      A ++DL  +   + EA+ L  +M
Sbjct: 259 LGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM 305


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/581 (38%), Positives = 339/581 (58%), Gaps = 5/581 (0%)

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G     FT    + A   L D+   R++   + +     NV   N L   Y K+  +  A
Sbjct: 71  GAATDRFTANHLMLAYADLGDLTAARELFERIPR----RNVMSWNILFGGYIKNGDLGGA 126

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           RKLF EMPE +  ++N M+         +ESL  F +++       +F   ++    A  
Sbjct: 127 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 186

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            D+  GRQ+H   + +    ++ V +SL  MY +CG  +E + +   L  +S V    +I
Sbjct: 187 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTII 246

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           +   Q G+ E AL  F  M    ++AD  TF S + + ++LA+L+ G+Q+H  V+++G  
Sbjct: 247 AGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVD 306

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
             V   + L+ MY++ G L D+ + F      +    +A+ISA   +G  Q  ++ F+ M
Sbjct: 307 KVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQM 366

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           +  G +P  V+ L++L ACSH GL EEG+  F  MT+ Y ++P  +HY  +VD+L RSGC
Sbjct: 367 MNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGC 426

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            DEAE L+  MP  PD ++W +++++C+  KN + A++ A ++ +++   D+A YV +SN
Sbjct: 427 LDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDP-HDSASYVLLSN 485

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           I A + +W  VS+V+KAMR+  VRK    SWVELK  +H F   DE HP+  EI   +E 
Sbjct: 486 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 545

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           +M ++++ GY PD S  LHD ++E K  SL +HSE+LAIAFA ++ PEG PI VMKNLR 
Sbjct: 546 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRV 605

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH AIKL+S++TGREI VRD SRFHHFKDG CSCRD+W
Sbjct: 606 CDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 11/388 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSIL---------IICNSLVDSYCKIRCLDL 126
           FA      ++  TAN L+  +AD+        L         +  N L   Y K   L  
Sbjct: 66  FAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGG 125

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++F EMP+++  ++NA++ G    G +EE++  F++M+  G  P +F   +      G
Sbjct: 126 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 185

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  GRQVHA+VV++    ++ V ++L  +Y +  C+ E   +   +P +  VS N +
Sbjct: 186 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 245

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I     N   + +L+ F  ++          F + +S  ++   L  G+QIH Q +    
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V V   LV MY++CG   +++ +F       T   +AMISAY   G+ ++A+ LF +
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSG 425
           M          TF ++L A +       G      + ++ G   +V   + ++D+  +SG
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 425

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L +A      MP   + V W  L+SAC
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSAC 453



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 176/362 (48%), Gaps = 3/362 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +N +S N+L  GY+K+G+L  AR+LF+ M +R   +W  ++ G +      E+   F
Sbjct: 102 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 161

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +DMR + G  PD     ++   C+         QVHA +++ G +  + + +SL   Y +
Sbjct: 162 LDMRRE-GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 220

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL     V + +P    VS N +I G  + G +E A++ F  M+ +G      TF +A
Sbjct: 221 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 280

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +A G+Q+H  V+K    + V V   L+ +YS+  C+ ++ ++F      D 
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 340

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
              + MI+ Y ++   +++++LF+++     + S   F  LL   ++    + G      
Sbjct: 341 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 400

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLE 358
              T  +   VK    +VD+  + G  +EA+ +  ++      V W  ++SA   + N +
Sbjct: 401 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFD 460

Query: 359 EA 360
            A
Sbjct: 461 MA 462



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 37/319 (11%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H     + A ++   AN L+  YA  G    A+E+F  +   + + W  +   Y++ 
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 355 GNL-------------------------------EEALNLFIEMCRANISADQATFASIL 383
           G+L                               EE+L  F++M R  +  D+    S+ 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R  A L  +  G+Q+H++V+RSG   ++  GS+L  MY + G L++     + +P  +IV
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           S N +I+   QNGD++  L+ F  M   G   D V+ +S +S+CS    + +G Q  +  
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQG-QQIHGQ 299

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             K  +         +V +  R GC  ++E++        D  + S++I++   H +   
Sbjct: 300 VMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHGH--- 355

Query: 564 AKKAADQLFKMEKLRDAAP 582
             + A +LFK      A P
Sbjct: 356 -GQKAIELFKQMMNGGAEP 373



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 47/222 (21%)

Query: 355 GNLEEALNLFIEMCRANISADQAT-FASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
           G L +AL       R  + +D A  F+ + RA   L  L   +QLH+F   SG  ++ F+
Sbjct: 25  GRLRDALRRPF---RGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFT 78

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE------- 466
            + L+  YA  G L  A + F+ +P RN++SWN L     +NGD     K F+       
Sbjct: 79  ANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV 138

Query: 467 ------------------------DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
                                   DM + G  PD   L SV   C+    +  G Q    
Sbjct: 139 ATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ---- 194

Query: 503 MTQKYKLRPKKEH----YASMVDILCRSGCFDEAEKLMAQMP 540
               Y +R   +      +S+  +  R GC  E E ++  +P
Sbjct: 195 -VHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/711 (33%), Positives = 390/711 (54%), Gaps = 46/711 (6%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFG-----YNSILIICNSLVDSYCKIRCLDLARRVFK 132
           +L+  CSE     +L Q+HA +++ G     +++  +I  + +  +     LD A++VF 
Sbjct: 40  SLIDQCSE---TKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPF---PSLDYAQQVFD 93

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAGVGLADIA 191
           ++P  +  ++N LI  +A      +++ +F+ M H     P  FTF   + A   L ++ 
Sbjct: 94  QIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELF 153

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+  H  V+K     +VF+ N+L+  Y+K   +    ++F  +P  D VS+N MIT + 
Sbjct: 154 TGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                +E+L+LF+E++      +      +LS  A K D + GR +H+          + 
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT-------------------------- 345
           ++N+++DMY KCG  E+AK +F  +     V WT                          
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333

Query: 346 -----AMISAYVQKGNLEEALNLFIEMCRANIS-ADQATFASILRASAELASLSLGKQLH 399
                A+ISAY Q G  +EAL LF E+  +  +  D+ T  S L A A+L ++ LG  +H
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
            ++ + G   N    ++L+DMY K G L+ A+  F  +  +++  W+A+I+  A +G  +
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 453

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             +  F  M +   +P++V+  ++L ACSH GL+EEG  +FN M   Y + P  +HYA M
Sbjct: 454 DAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACM 513

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           VDIL R+G  +EA +L+ +MP  P   +W +++ +C IH+N+  A++A  QL ++E    
Sbjct: 514 VDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNH 573

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
            A YV +SNIYA AG+W+ VS ++K MR+ G++K    S +E+   VH F   D  HP  
Sbjct: 574 GA-YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSA 632

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGS 698
            +I  K++ ++  ++  GY P+ S  L   E+E++K ++L  HSE+LAIAF LI+T +  
Sbjct: 633 KKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQ 692

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           PI ++KNLR C DCH+  KL+SK+  REI +RD  RFHHF++G CSC D+W
Sbjct: 693 PIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 227/466 (48%), Gaps = 34/466 (7%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           +L  A+++F+ +      +W  LI  Y+  +   ++  +F+ M       PD  TF  L+
Sbjct: 84  SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
              SE +        H  +IK    S + I NSL+  Y K   L L  RVF  +P++D V
Sbjct: 144 KAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVV 203

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           S+N++IT F + G  EEA++LF EM+    KP+  T    LSA    +D   GR VH+++
Sbjct: 204 SWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI 263

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY---------- 250
            +    E++ ++NA+LD+Y+K   V +A++LF +MPE D VS+  M+  Y          
Sbjct: 264 ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323

Query: 251 ------------AWNE---------QYKESLKLFRELQFTRFDRS-QFPFSTLLSVVANK 288
                       AWN          + KE+L+LF ELQ ++  +  +    + LS  A  
Sbjct: 324 GIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL 383

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             + +G  IH             +  SL+DMY KCG  ++A  +F ++       W+AMI
Sbjct: 384 GAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMI 443

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGF 407
           +     G+ ++A+ LF +M    +  +  TF +IL A + +  +  G+   +   +  G 
Sbjct: 444 AGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGV 503

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
           +  V   + ++D+  ++G L++A++  ++MP     S W AL+ AC
Sbjct: 504 LPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGAC 549



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 179/402 (44%), Gaps = 38/402 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L     +F ++  R  VSW  +I  + Q     EA +LF +M T    
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ-NV 233

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ +T   +LS C++         VH+ I +      L + N+++D Y K   ++ A+R
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKR 293

Query: 130 VFKEMPQKDSVS-------------------------------FNALITGFAKEGLNEEA 158
           +F +MP+KD VS                               +NALI+ + + G  +EA
Sbjct: 294 LFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEA 353

Query: 159 IKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           ++LF E+Q     KP + T  + LSA   L  + LG  +H ++ K     N  +  +L+D
Sbjct: 354 LELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLID 413

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   + +A  +F  +   D   ++ MI   A +   K+++ LF ++Q  +   +   
Sbjct: 414 MYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVT 473

Query: 278 FSTLLSVVANKLDLQIGRQIHTQT-IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F+ +L   ++   ++ GR    Q  +V   +  VK    +VD+  + G  EEA E+   +
Sbjct: 474 FTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKM 533

Query: 337 SHISTVP-WTAMISAYVQKGNL---EEALNLFIEMCRANISA 374
                   W A++ A     N+   E+A +  IE+   N  A
Sbjct: 534 PMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 575



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 7/246 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS   ++ GY K G    A+ +F++M ++   +W  LI  Y Q  + +EA +LF
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +++    + PD VT  + LS C++    +    +H  I K G      +  SL+D YCK
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  A  VF  + +KD   ++A+I G A  G  ++AI LF +MQ    KP+  TF   
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVA----NALLDLYSKHDCVVEARKLFGEMP 236
           L A   +  +  GR    F  +   V  V         ++D+  +   + EA +L  +MP
Sbjct: 478 LCACSHVGLVEEGR---TFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP 534

Query: 237 EVDGVS 242
                S
Sbjct: 535 MAPAAS 540


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/579 (37%), Positives = 351/579 (60%), Gaps = 3/579 (0%)

Query: 172 PSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           PS+ + +A+ L + +    +  G+Q+HA + +     N+ +A  L++ YS  + +  A  
Sbjct: 55  PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           LF ++P+ +   +NV+I  YAWN  ++ ++ L+ ++         F    +L   +    
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           +  GR IH + I +    +V V  +LVDMYAKCG   +A+ +F  +     V W +M++A
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y Q G+ +E+L+L  EM    +   +AT  +++ +SA++A L  G+++H F  R GF  N
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
               +AL+DMYAK GS+K A   F+ + E+ +VSWNA+I+  A +G A   L  FE M++
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK 354

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
              QPD ++ +  L+ACS   L++EG   +N M +  ++ P  EHY  MVD+L   G  D
Sbjct: 355 EA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA  L+ QM   PD  +W +++NSC+ H N+E A+ A ++L ++E   D+  YV ++N+Y
Sbjct: 414 EAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEP-DDSGNYVILANMY 472

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           A +G+WE V+++++ M ++G++K  A SW+E+K+KV+ F + D  HP +  I  +++ L 
Sbjct: 473 AQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLE 532

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
             M++ GY PDT    HD +E+ K + +  HSERLAIAF LI+T  G+ +L+ KNLR C 
Sbjct: 533 GLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICE 592

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH AIK ISKIT REITVRD +R+HHF+ G CSC D+W
Sbjct: 593 DCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 203/412 (49%), Gaps = 9/412 (2%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S  ++  +A+LL  C          Q+HA + + G    L +   LV+ Y     L  A 
Sbjct: 54  SPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAH 113

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F ++P+ +   +N LI  +A  G +E AI L+ +M   G KP +FT    L A   L+
Sbjct: 114 HLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALS 173

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            I  GR +H  V+++ +  +VFV  AL+D+Y+K  CVV+AR +F ++ + D V +N M+ 
Sbjct: 174 TIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLA 233

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA N    ESL L  E+       ++    T++S  A+   L  GR+IH          
Sbjct: 234 AYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQY 293

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
             KV  +L+DMYAKCG  + A  +F  L     V W A+I+ Y   G   EAL+LF  M 
Sbjct: 294 NDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM 353

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSL 427
           +     D  TF   L A +    L  G+ L++ ++R   ++  V   + ++D+    G L
Sbjct: 354 K-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQL 412

Query: 428 KDAIQTFKE---MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
            +A    ++   MP+  +  W AL+++C  +G+ +    + E +++   +PD
Sbjct: 413 DEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVALEKLIE--LEPD 460



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 190/408 (46%), Gaps = 17/408 (4%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y    +L  A  LF+ +       W +LI  Y+       A  L+  M  + G  P
Sbjct: 99  LVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM-LEYGLKP 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   +L  CS   T  E   +H  +I+ G+   + +  +LVD Y K  C+  AR VF
Sbjct: 158 DNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVF 217

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++  +D+V +N+++  +A+ G  +E++ L  EM   G +P++ T    +S+   +A + 
Sbjct: 218 DKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLP 277

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR++H F  +  F  N  V  AL+D+Y+K   V  A  LF  + E   VS+N +IT YA
Sbjct: 278 HGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYA 337

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-V 310
            +    E+L LF E            F   L+  +    L  GR ++   +    I+  V
Sbjct: 338 MHGLAVEALDLF-ERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTV 396

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYVQKGNL---EEALNL 363
           +    +VD+   CG+ +EA ++   +  +  +P    W A++++    GN+   E AL  
Sbjct: 397 EHYTCMVDLLGHCGQLDEAYDL---IRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEK 453

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            IE+   + S +    A++   S +   ++  +QL   +I  G   N+
Sbjct: 454 LIEL-EPDDSGNYVILANMYAQSGKWEGVARLRQL---MIDKGIKKNI 497


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 398/743 (53%), Gaps = 79/743 (10%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L+  ++ + +L  AR +F+ +       +TI++  Y+Q ++ REA  LF  +    
Sbjct: 57  SHKYLLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFK- 115

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
               D V++ +++ GC                         + C  +V           A
Sbjct: 116 ----DVVSWNSIIKGC-------------------------LHCGDIVT----------A 136

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R++F EMP++  VS+  L+ G  + G+ +EA  LF  M+     P D             
Sbjct: 137 RKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAME-----PMD------------- 178

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                 R V A+             NA++  Y  +  V +A +LF +MP  D +S++ MI
Sbjct: 179 ------RDVAAW-------------NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMI 219

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI-VTTA 306
                N + +++L LFR++  +    S       LS  A     ++G QIH     +   
Sbjct: 220 AGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDW 279

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
             +  V+ SLV  YA C + E A  +F  + + S V WTA+++ Y       EAL +F E
Sbjct: 280 HFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGE 339

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R ++  ++++F S L +   L  +  GK +H+  ++ G  S  + G +L+ MY+K G 
Sbjct: 340 MMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGY 399

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + DA+  FK + E+N+VSWN++I  CAQ+G     L  F  M++ G  PD +++  +LSA
Sbjct: 400 VSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSA 459

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH G++++   +F    QK  +    EHY SMVD+L R G  +EAE ++  MP + + +
Sbjct: 460 CSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSM 519

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++++CR H NL+ AK+AA+Q+F++E    AA YV +SN+YA + +W  V+ +++ M
Sbjct: 520 VWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAA-YVLLSNLYASSSRWAEVALIRRKM 578

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           +  GV K    SW+ LK + H F + D  HP   +I +K+E L  ++K+ GY PD   AL
Sbjct: 579 KHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFAL 638

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD + E K E L YHSERLAIAF L++T EGS I VMKNLR C DCH AIKL++KI  RE
Sbjct: 639 HDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDRE 698

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRDSSRFH FK+G CSC D+W
Sbjct: 699 IVVRDSSRFHDFKNGICSCGDYW 721



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 227/493 (46%), Gaps = 22/493 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +     +++  Y ++  L  A +LF  +  +  VSW  +I G         A KLF
Sbjct: 81  IPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLF 140

Query: 61  VDM--RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI---LIICNSLV 115
            +M  RT        V++ TL+ G        E     A+ + +    +   +   N+++
Sbjct: 141 DEMPRRT-------VVSWTTLVDGLLRLGIVQE-----AETLFWAMEPMDRDVAAWNAMI 188

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             YC    +D A ++F +MP +D +S++++I G    G +E+A+ LF +M   G   S  
Sbjct: 189 HGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSG 248

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVK-TNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
                LSA   +    +G Q+H  V K  ++  + FV+ +L+  Y+    +  A ++FGE
Sbjct: 249 VLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGE 308

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           +     V +  ++T Y  N++++E+L++F E+       ++  F++ L+      D++ G
Sbjct: 309 VVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERG 368

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           + IH   +     S   V  SLV MY+KCG   +A  +F  ++  + V W ++I    Q 
Sbjct: 369 KVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQH 428

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFS 413
           G    AL LF +M R  +  D  T   +L A +    L   +     F  +      +  
Sbjct: 429 GCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEH 488

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            ++++D+  + G L++A      MP + N + W AL+SAC ++ +     ++   + +  
Sbjct: 489 YTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFE-- 546

Query: 473 YQPDSVSLLSVLS 485
            +PD  +   +LS
Sbjct: 547 IEPDCSAAYVLLS 559



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 16/413 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++  + N +I GY  +G +  A +LF  M  R  +SW+ +I G     +  +A  LF D
Sbjct: 178 DRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRD 237

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKI 121
           M   G      V    L +    P      IQ+H  + K G ++    +  SLV  Y   
Sbjct: 238 MVASGVCLSSGVLVCGLSAAAKIP-AWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGC 296

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
           + ++ A RVF E+  K  V + AL+TG+     + EA+++F EM  +   P++ +F +AL
Sbjct: 297 KQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSAL 356

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
           ++  GL DI  G+ +HA  VK       +V  +L+ +YSK   V +A  +F  + E + V
Sbjct: 357 NSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVV 416

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQI 297
           S+N +I   A +     +L LF ++     D      + LLS  ++   LQ      R  
Sbjct: 417 SWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYF 476

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGN 356
             +  VT  I       S+VD+  +CG  EEA+ +  ++    +++ W A++SA  +  N
Sbjct: 477 GQKRSVTLTIEHY---TSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSN 533

Query: 357 LE---EALNLFIEMCRANISADQATFASILRASAELASLSL--GKQLHSFVIR 404
           L+    A N   E+   + SA     +++  +S+  A ++L   K  H+ V++
Sbjct: 534 LDLAKRAANQIFEI-EPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVK 585


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/581 (38%), Positives = 339/581 (58%), Gaps = 5/581 (0%)

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G     FT    + A   L D+   R++   + +     NV   N L   Y K+  +  A
Sbjct: 133 GAATDRFTANHLMLAYADLGDLTAARELFERIPR----RNVMSWNILFGGYIKNGDLGGA 188

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           RKLF EMPE +  ++N M+         +ESL  F +++       +F   ++    A  
Sbjct: 189 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 248

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            D+  GRQ+H   + +    ++ V +SL  MY +CG  +E + +   L  +S V    +I
Sbjct: 249 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTII 308

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           +   Q G+ E AL  F  M    ++AD  TF S + + ++LA+L+ G+Q+H  V+++G  
Sbjct: 309 AGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVD 368

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
             V   + L+ MY++ G L D+ + F      +    +A+ISA   +G  Q  ++ F+ M
Sbjct: 369 KVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQM 428

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           +  G +P  V+ L++L ACSH GL EEG+  F  MT+ Y ++P  +HY  +VD+L RSGC
Sbjct: 429 MNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGC 488

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            DEAE L+  MP  PD ++W +++++C+  KN + A++ A ++ +++   D+A YV +SN
Sbjct: 489 LDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDP-HDSASYVLLSN 547

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           I A + +W  VS+V+KAMR+  VRK    SWVELK  +H F   DE HP+  EI   +E 
Sbjct: 548 IRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEE 607

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           +M ++++ GY PD S  LHD ++E K  SL +HSE+LAIAFA ++ PEG PI VMKNLR 
Sbjct: 608 MMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRV 667

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH AIKL+S++TGREI VRD SRFHHFKDG CSCRD+W
Sbjct: 668 CDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 11/388 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSIL---------IICNSLVDSYCKIRCLDL 126
           FA      ++  TAN L+  +AD+        L         +  N L   Y K   L  
Sbjct: 128 FAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGG 187

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR++F EMP+++  ++NA++ G    G +EE++  F++M+  G  P +F   +      G
Sbjct: 188 ARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAG 247

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D+  GRQVHA+VV++    ++ V ++L  +Y +  C+ E   +   +P +  VS N +
Sbjct: 248 LRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTI 307

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I     N   + +L+ F  ++          F + +S  ++   L  G+QIH Q +    
Sbjct: 308 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 367

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
              V V   LV MY++CG   +++ +F       T   +AMISAY   G+ ++A+ LF +
Sbjct: 368 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 427

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSG 425
           M          TF ++L A +       G      + ++ G   +V   + ++D+  +SG
Sbjct: 428 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 487

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L +A      MP   + V W  L+SAC
Sbjct: 488 CLDEAEALILSMPLTPDGVIWKTLLSAC 515



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 176/362 (48%), Gaps = 3/362 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +N +S N+L  GY+K+G+L  AR+LF+ M +R   +W  ++ G +      E+   F
Sbjct: 164 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 223

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +DMR + G  PD     ++   C+         QVHA +++ G +  + + +SL   Y +
Sbjct: 224 LDMRRE-GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 282

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL     V + +P    VS N +I G  + G +E A++ F  M+ +G      TF +A
Sbjct: 283 CGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSA 342

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +A G+Q+H  V+K    + V V   L+ +YS+  C+ ++ ++F      D 
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDT 402

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
              + MI+ Y ++   +++++LF+++     + S   F  LL   ++    + G      
Sbjct: 403 FLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL 462

Query: 301 TIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLE 358
              T  +   VK    +VD+  + G  +EA+ +  ++      V W  ++SA   + N +
Sbjct: 463 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFD 522

Query: 359 EA 360
            A
Sbjct: 523 MA 524



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 37/310 (11%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H     + A ++   AN L+  YA  G    A+E+F  +   + + W  +   Y++ 
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182

Query: 355 GNL-------------------------------EEALNLFIEMCRANISADQATFASIL 383
           G+L                               EE+L  F++M R  +  D+    S+ 
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R  A L  +  G+Q+H++V+RSG   ++  GS+L  MY + G L++     + +P  +IV
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           S N +I+   QNGD++  L+ F  M   G   D V+ +S +S+CS    + +G Q  +  
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQG-QQIHGQ 361

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             K  +         +V +  R GC  ++E++        D  + S++I++   H +   
Sbjct: 362 VMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGY-CGSDTFLLSAMISAYGFHGH--- 417

Query: 564 AKKAADQLFK 573
             + A +LFK
Sbjct: 418 -GQKAIELFK 426



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 47/222 (21%)

Query: 355 GNLEEALNLFIEMCRANISADQAT-FASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
           G L +AL       R  + +D A  F+ + RA   L  L   +QLH+F   SG  ++ F+
Sbjct: 87  GRLRDALRRPF---RGVLWSDAARLFSHLFRACRALRPL---RQLHAFAATSGAATDRFT 140

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE------- 466
            + L+  YA  G L  A + F+ +P RN++SWN L     +NGD     K F+       
Sbjct: 141 ANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV 200

Query: 467 ------------------------DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
                                   DM + G  PD   L SV   C+    +  G Q    
Sbjct: 201 ATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQ---- 256

Query: 503 MTQKYKLRPKKEH----YASMVDILCRSGCFDEAEKLMAQMP 540
               Y +R   +      +S+  +  R GC  E E ++  +P
Sbjct: 257 -VHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 297


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/661 (35%), Positives = 370/661 (55%), Gaps = 38/661 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  +F+ + + + + +N +  G A    +  A+KL+V M  LG  P+ ++F   L +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDCVV-- 226
                 +  G+Q+H  V+K  +  +++V  +L+ +Y               S H  VV  
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 227 --------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
                          ARKLF E+   D VS+N MI+ Y     +KE+L+L++++  T   
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             +    T++S  A    +++GRQ+H+        S +K+ N L+D+Y+KCG  E A  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  L+    + W  +I  +      +EAL LF EM R+  S +  T  S+L A A L ++
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALL----DMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
            +G+ +H ++ +   +  V + S+LL    DMYAK G ++ A Q F  M  R++ SWNA+
Sbjct: 315 DIGRWIHVYINKR--LKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I   A +G A A    F  M ++G  PD ++ + +LSACSH G+++ G   F SM+Q YK
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + PK EHY  M+D+L   G F EA++++  MP EPD ++W S++ +C++H N+E  +  A
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
             L K+E   +   YV +SNIYA AG+W+ V++++  + ++G++K    S +E+ S VH 
Sbjct: 493 QNLIKIEP-ENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHE 551

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ HP+  EI R +E +   M++ G+ PDTS  L + +EE K  +L++HSE+LAIA
Sbjct: 552 FIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 611

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F LI+T  G+ + ++KNLR C +CH A KLISKI  REI  RD +R H  KDG  SC D+
Sbjct: 612 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDY 671

Query: 749 W 749
           W
Sbjct: 672 W 672



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 231/505 (45%), Gaps = 43/505 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L+ A  +F ++ +   + W  +  G++  +    A KL+V M    G  P+  +F  LL
Sbjct: 14  GLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCM-ISLGLLPNSYSFPFLL 72

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
             C++     E  Q+H  ++K GY+  + +  SL+  Y +   L+ A +VF     +  V
Sbjct: 73  KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132

Query: 141 SFNALITGFAKEG-LN------------------------------EEAIKLFVEMQHLG 169
           S+ ALITG+A  G +N                              +EA++L+ +M    
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN 192

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            KP + T    +SA      I LGRQ+H+++    F  N+ + N L+DLYSK   V  A 
Sbjct: 193 VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETAC 252

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            LF  + + D +S+N +I  +     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 253 GLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 312

Query: 290 DLQIGRQIHTQT-----IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            + IGR IH         VT A S   +  SL+DMYAKCG  E AK++F ++   S   W
Sbjct: 313 AIDIGRWIHVYINKRLKGVTNASS---LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVI 403
            AMI  +   G    A +LF +M +  I  D  TF  +L A +    L LG+ +  S   
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATL 462
                  +     ++D+    G  K+A +  + MP E + V W +L+ AC  + + +   
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGE 489

Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSA 486
              +++++     P S  LLS + A
Sbjct: 490 SYAQNLIKIEPENPGSYVLLSNIYA 514



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 183/362 (50%), Gaps = 9/362 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GY   G +  AR+LF+ +  +  VSW  +I GY +   F+EA +L+ D
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T++S C++  +     Q+H+ I   G+ S + I N L+D Y K  
Sbjct: 188 MMKTN-VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG 246

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F+ + +KD +S+N LI G     L +EA+ LF EM   G  P+D T  + L 
Sbjct: 247 EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALL----DLYSKHDCVVEARKLFGEMPEV 238
           A   L  I +GR +H ++ K   ++ V  A++LL    D+Y+K   +  A+++F  M   
Sbjct: 307 ACAHLGAIDIGRWIHVYINKR--LKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR 364

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
              S+N MI  +A + +   +  LF +++    D     F  LLS  ++   L +GR I 
Sbjct: 365 SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF 424

Query: 299 TQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGN 356
                   I+ +++    ++D+   CG F+EAKE+   +      V W +++ A     N
Sbjct: 425 RSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNN 484

Query: 357 LE 358
           +E
Sbjct: 485 VE 486


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/742 (31%), Positives = 393/742 (52%), Gaps = 80/742 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y   G+L   R +F++M  +    W  ++  Y++   F+E+  LF  M   G    
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 195

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                   + G   P++A+EL                                      F
Sbjct: 196 --------IEG-KRPESASEL--------------------------------------F 208

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-- 189
            ++  +D +S+N++I+G+   GL E  + ++ +M +LG    D   A  +S  VG A+  
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI---DVDLATIISVLVGCANSG 265

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            ++LG+ VH+  +K++F   +  +N LLD+YSK   +  A ++F +M E + VS+  MI 
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  +     ++ L ++++           +++L   A    L  G+ +H         S
Sbjct: 326 GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 385

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V N+L+DMYAKCG  E A  +F+ +     + W  M+                    
Sbjct: 386 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-------------------- 425

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T A IL A A L++L  GK++H +++R+G+ S+    +AL+D+Y K G L 
Sbjct: 426 -GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  +P +++VSW  +I+    +G     + +F +M  +G +PD VS +S+L ACS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+E+G ++F  M   + + PK EHYA MVD+L R+G   +A K +  +P  PD  +W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 604

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++  CRI+ ++E A+K A+++F++E   +   YV ++NIYA A + E V ++++ + +
Sbjct: 605 GALLCGCRIYHDIELAEKVAERVFELEP-ENTGYYVLLANIYAEAEKREEVKRMREKIGK 663

Query: 609 RGVRKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +G+RK    SW+E+K +V++F + N+  HP + +I   ++ + ++MK+EGY P T  AL 
Sbjct: 664 KGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 723

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF L+  P    I V KNLR C DCH   K +SK T REI
Sbjct: 724 NADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREI 783

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RDS+RFHHFKDG+CSCR FW
Sbjct: 784 VLRDSNRFHHFKDGYCSCRGFW 805



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 232/510 (45%), Gaps = 52/510 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLA--------------------TARELFNSMVDRTAVSW 40
           M  +N    N ++S Y K G+                      +A ELF+ + DR  +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISW 219

Query: 41  TILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
             +I GY           ++  M   G  D D  T  ++L GC+   T +    VH+  I
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           K  +   +   N+L+D Y K   LD A RVF++M +++ VS+ ++I G+ ++G ++ AI 
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 338

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L  +M+  G K       + L A      +  G+ VH ++   N   N+FV NAL+D+Y+
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYA 398

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +  A  +F  M   D +S+N M+      E   +S  +                + 
Sbjct: 399 KCGSMEGANSVFSTMVVKDIISWNTMV-----GELKPDSRTM----------------AC 437

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A+   L+ G++IH   +     S+  VAN+LVD+Y KCG    A+ +F  +    
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT MI+ Y   G   EA+  F EM  A I  D+ +F SIL A +    L  G +   
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF- 556

Query: 401 FVIRSGFM--SNVFSGSALLDMYAKSGSLKDA---IQTFKEMPERNIVSWNALISACAQN 455
           +++++ F     +   + ++D+ +++G+L  A   I+T    P+  I  W AL+  C   
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI--WGALLCGCRIY 614

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            D +   K  E + +   +P++     +L+
Sbjct: 615 HDIELAEKVAERVFE--LEPENTGYYVLLA 642



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 203/472 (43%), Gaps = 84/472 (17%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +NA I  F + G  E A++L    Q    +    T+ + L    GL  +  G++VH+ + 
Sbjct: 69  YNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKKVHSIIK 126

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
             +   +  +   L+  Y+    + E R++F  M + +   +N M++ YA    +KES+ 
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 262 LFR----------------ELQFTRFDRSQFPF--------------------------- 278
           LF+                EL     DR    +                           
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 279 -----STLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                +T++SV+   AN   L +G+ +H+  I ++    +  +N+L+DMY+KCG  + A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   + V WT+MI+ Y + G  + A+ L  +M +  +  D     SIL A A   
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  GK +H ++  +   SN+F  +AL+DMYAK GS++ A   F  M  ++I+SWN ++ 
Sbjct: 367 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG 426

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
                                  +PDS ++  +L AC+    +E G +        Y LR
Sbjct: 427 E---------------------LKPDSRTMACILPACASLSALERGKE-----IHGYILR 460

Query: 511 ---PKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                  H A ++VD+  + G    A  L   +P   D + W+ +I    +H
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMH 511


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/675 (35%), Positives = 387/675 (57%), Gaps = 38/675 (5%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +++L+  C    +  ++ ++ +  +K G++  L   N L+D+Y K   +  AR+VF E+P
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 138

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +  V++N++I  + + G ++EAI ++  M   G  P +FTF++   A   L  +  G++
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198

Query: 196 VHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            H   VV    V NVFV +AL+D+Y+K   + +AR +  ++   D V +  +I  Y+ + 
Sbjct: 199 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 258

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
           +  ESL++FR +     + +++  S++L    N  DL  GR IH   IV   +       
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHG-LIVKAGLE------ 311

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
                                    S V WT++I   VQ G  E AL  F +M R++I+ 
Sbjct: 312 -------------------------SAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 346

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  T +S+LRA + LA L  GKQ+H+ V++ G   + + G+AL+D Y K GS + A   F
Sbjct: 347 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 406

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             + E ++VS N++I + AQNG     L+ F  M  +G +P++V+ L VLSAC++ GL+E
Sbjct: 407 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLE 466

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG   F+S      +   K+HYA MVD+L R+G   EAE L+ Q+    D ++W +++++
Sbjct: 467 EGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSA 525

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CRIH ++E AK+  +++  +    D   +V +SN+YA  G W  V ++K AMRE  ++K 
Sbjct: 526 CRIHGDVEMAKRVMNRVIDLAP-EDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKN 584

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SWV+++ ++H F A D  HP   +IR K+E L++++K+ GY PDT   L D DEE K
Sbjct: 585 PAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKK 644

Query: 675 VESLKYHSERLAIAFALINTP-EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           + SL YHSE+LA+AFAL  +  + + I ++KNLR C DCH  +K +SKI GR+I  RD  
Sbjct: 645 IRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVK 704

Query: 734 RFHHFKDGFCSCRDF 748
           RFHHF++G CSC D+
Sbjct: 705 RFHHFRNGLCSCGDY 719



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 205/452 (45%), Gaps = 35/452 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y+K G++  AR++F+ +  R  V+W  +I  Y +  + +EA  ++  M  D G 
Sbjct: 115 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD-GI 173

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDLAR 128
            PD  TF+++    S+    +E  + H   +  G   S + + ++LVD Y K   +  AR
Sbjct: 174 LPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 233

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            V  ++  KD V F ALI G++  G + E++++F  M   G + +++T ++ L     L 
Sbjct: 234 LVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 293

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+  GR +H  +VK                                      V++  +I 
Sbjct: 294 DLTSGRLIHGLIVKAGL--------------------------------ESAVTWTSVIV 321

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N + + +L  FR++  +    + F  S++L   ++   L+ G+QIH   +      
Sbjct: 322 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 381

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V  +L+D Y KCG  E A+ +F  L  +  V   +MI +Y Q G   EAL LF  M 
Sbjct: 382 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 441

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSL 427
              +  +  T+  +L A      L  G  + S    SG +       A ++D+  ++G L
Sbjct: 442 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRL 501

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           K+A     ++   ++V W  L+SAC  +GD +
Sbjct: 502 KEAEMLINQVNISDVVIWRTLLSACRIHGDVE 533



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 217/520 (41%), Gaps = 82/520 (15%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + L+  Y K G +  AR + + +V +  V +T LI GYS   +  E+ ++F +M 
Sbjct: 212 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNM- 270

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           T  G + +  T +++L  C   +       +H  I+K G  S                  
Sbjct: 271 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES------------------ 312

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                         +V++ ++I G  + G  E A+  F +M      P+ FT ++ L A 
Sbjct: 313 --------------AVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRAC 358

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA +  G+Q+HA V+K     + +V  AL+D Y K      AR +F  + EVD VS N
Sbjct: 359 SSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVN 418

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  YA N    E+L+LF  ++ T  + +   +  +LS   N   L+ G  I +    +
Sbjct: 419 SMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNS 478

Query: 305 TAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA--- 360
             I   K   + +VD+  + GR +EA+ +   ++    V W  ++SA    G++E A   
Sbjct: 479 GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRV 538

Query: 361 LNLFIEMCR---------ANISADQATFASILRASAELASLSLGK-----------QLHS 400
           +N  I++           +N+ A    ++ ++   + +  + L K           ++H+
Sbjct: 539 MNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHT 598

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
                 FM+  +S     D+  K   L + ++    +P+   V          Q+ D + 
Sbjct: 599 ------FMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFV---------LQDLDEEK 643

Query: 461 TLKSFE----------DMVQSGYQPDSVSLLSVLSACSHC 490
            ++S             + +S Y+  ++ +L  L  C  C
Sbjct: 644 KIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDC 683



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 2/127 (1%)

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A+ S     ++S+++    + S++   ++ S  ++ GF  ++  G+ L+D Y K GS+  
Sbjct: 72  ASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVY 129

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F E+P R+IV+WN++I++  +NG ++  +  ++ MV  G  PD  +  SV  A S 
Sbjct: 130 ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSD 189

Query: 490 CGLIEEG 496
            GL+ EG
Sbjct: 190 LGLVHEG 196


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/670 (35%), Positives = 379/670 (56%), Gaps = 70/670 (10%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR-- 129
           D   F+ LL+ C+   +A +  +VHA IIK  + S   I N L+D Y K  C+D+AR+  
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77

Query: 130 -----------------------------VFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
                                        +F++MPQ D  S+N++I+GF + G  +EA+ 
Sbjct: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
            F +M   GF  ++++F +ALSA  GL D+ LG Q+H+ V ++N++ +V++ +AL+D+YS
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   V  A+ +F EM     VS+N +ITCY  N    E+LK+F E+     +  +   ++
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEI------- 332
           ++S  A    ++ G+QIH + +      +++ + N+L+DMYAKC R  EA+ I       
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317

Query: 333 ------------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
                                   F+N+     + W A+I+   Q G  EEAL LF  + 
Sbjct: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK 377

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM------SNVFSGSALLDMYA 422
           R ++     TF ++L A A LA L LG+Q HS V++ GF       S+VF G++L+DMY 
Sbjct: 378 RESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYM 437

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GS+++  + F+ M E++ VSWNA+I   AQNG     L+ F  M++SG  PD V+++ 
Sbjct: 438 KCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIG 497

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL ACSH GL++EG  YF SMT ++ L P K+HY  MVD+L R+G  +EA+ L+ +M  +
Sbjct: 498 VLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQ 557

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+W S++ +C++H+N++  +    +L +++   ++ PYV +SN+YA    W++V +V
Sbjct: 558 PDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDP-ENSGPYVLLSNMYAENRDWKNVVRV 616

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +K MR+RGV K    SW+E++ +++VF   D+ H +  EI   +  ++Q+MK+ GY P  
Sbjct: 617 RKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYV 676

Query: 663 SCALHDEDEE 672
                DEDEE
Sbjct: 677 GSNEFDEDEE 686



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 245/499 (49%), Gaps = 41/499 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N  S N +I  + KSG L  A  +F  M      SW  +I G+ Q  +F EA   F
Sbjct: 80  MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M   G    +Y +F + LS C+         Q+H+ + +  Y S + + ++LVD Y K
Sbjct: 140 AQMHGHGFLVNEY-SFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSK 198

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+ VF EM  +  VS+N+LIT + + G  +EA+K+FVEM   G +P + T A+ 
Sbjct: 199 CGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASV 258

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           +SA   ++ I  G+Q+HA VVK + F  ++ + NALLD+Y+K + + EAR +F  MP   
Sbjct: 259 VSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRS 318

Query: 240 GVSYNVMITCYA----------------------WNE---------QYKESLKLFRELQF 268
            VS   M++ YA                      WN          + +E+L LFR L+ 
Sbjct: 319 VVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKR 378

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F  LL+  AN  DLQ+GRQ H+  +           S+V V NSL+DMY K
Sbjct: 379 ESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMK 438

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E    +F ++     V W AMI  Y Q G   +AL +F +M  +  + D  T   +
Sbjct: 439 CGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGV 498

Query: 383 LRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
           L A +    L  G+    S   + G M      + ++D+  ++G L++A    +EM  + 
Sbjct: 499 LCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQP 558

Query: 441 NIVSWNALISACAQNGDAQ 459
           + + W +L++AC  + + Q
Sbjct: 559 DAIVWGSLLAACKVHRNIQ 577


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/697 (34%), Positives = 396/697 (56%), Gaps = 4/697 (0%)

Query: 4   QNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           QN VS  N LI+ +   G +  A +LF+ M +   +S   +I  YS +    + F +F D
Sbjct: 177 QNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSD 236

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR  G   PD  T  +L+S C+  D  +    +H+  ++   +S + + N+LV+ Y    
Sbjct: 237 MRHHG-LRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A  +F  M ++D +S+N +I+ + +   + +A+K   ++ H    P+  TF++AL 
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALG 355

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      +  G+ VHA V++ +   N+ V N+L+ +Y K + + +A K+F  MP  D VS
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS 415

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ-IGRQIHTQT 301
           YNV+I  YA  E   +++++F  ++      +      +     +  DL   GR +H   
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYI 475

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I T  +S+  VANSL+ MYAKCG  E +  IF ++++ + V W A+I+A  Q G+ EEAL
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEAL 535

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LFI+M  A    D+   A  L + A LASL  G QLH   ++SG  S+ +  +A +DMY
Sbjct: 536 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMY 595

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G + + +Q   +   R    WN LIS  A+ G  +   ++F+ MV  G +PD V+ +
Sbjct: 596 GKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFV 655

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           ++LSACSH GL+++G+ Y+NSM   + + P  +H   +VD+L R G F EAE+ + +MP 
Sbjct: 656 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPV 715

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P++++W S+++S R HKNLE  +KAA +L +++   D+A YV +SN+YA   +W  V +
Sbjct: 716 LPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSA-YVLLSNLYATNARWVDVDK 774

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           ++  M+   + K  A SW++LK++V  F   D  H    +I  K++ ++ ++++ GY  D
Sbjct: 775 LRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIAD 834

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
           TS ALHD DEE K ++L  HSE+LA+A+ LI  PEGS
Sbjct: 835 TSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 871



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 228/456 (50%), Gaps = 6/456 (1%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M DRT  +W   + G  +  +   AF+L   MR  G     +   A+L++ C E    +E
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFA-LASLVTAC-ERRGRDE 58

Query: 92  LIQ----VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
            I     +HA   + G    + I  +L+  Y     +  ARR+F EMP+++ VS+ AL+ 
Sbjct: 59  GIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMV 118

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
             +  G  EE ++ + +M+  G   +   FA  +S    L +   G QV + V+ +    
Sbjct: 119 ALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQN 178

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
            V VAN+L+ ++     V +A KLF  M E D +S N MI+ Y+      +   +F +++
Sbjct: 179 QVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMR 238

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                       +L+SV A+      G  IH+  + ++  S V V N+LV+MY+  G+  
Sbjct: 239 HHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+ +F N+S    + W  MIS+YVQ  N  +AL    ++   N   +  TF+S L A +
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              +L  GK +H+ V++     N+  G++L+ MY K  S++DA + F+ MP  ++VS+N 
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNV 418

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           LI   A   D    ++ F  +  +G +P+ ++++++
Sbjct: 419 LIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI 454



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 230/462 (49%), Gaps = 10/462 (2%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---DI 190
           MP +   ++   ++G  + G +  A +L   M+  G   S F  A+ ++A         I
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           A G  +HA   +   + NV++  ALL LY     V +AR+LF EMPE + VS+  ++   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           + N   +E+L+ +R+++      +   F+T++S+  +  +   G Q+ +  IV+   ++V
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            VANSL+ M+   GR ++A+++F  +    T+   AMIS Y  +G   +   +F +M   
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D  T  S++   A     S G  +HS  +RS   S+V   +AL++MY+ +G L DA
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  M  R+++SWN +IS+  QN ++   LK+   +  +   P+ ++  S L ACS  
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G + +G +  +++  +  L+       S++ +  +    ++AEK+   MP   D + ++ 
Sbjct: 361 GALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-DVVSYNV 418

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAP-YVAMSNIYA 591
           +I    +   LE   KA  Q+F   +     P Y+ M NI+ 
Sbjct: 419 LIGGYAV---LEDGTKAM-QVFSWIRSAGIKPNYITMINIHG 456



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 162/361 (44%), Gaps = 35/361 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  + VS N+LI GY    +   A ++F         SW             R A    
Sbjct: 408 MPTHDVVSYNVLIGGYAVLEDGTKAMQVF---------SW------------IRSA---- 442

Query: 61  VDMRTDGGSDPDYVTFATLL-SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
                  G  P+Y+T   +  S  S  D  N    +HA II+ G+ S   + NSL+  Y 
Sbjct: 443 -------GIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   L+ +  +F  +  K+ VS+NA+I   A+ G  EEA+KLF++MQH G K      A 
Sbjct: 496 KCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAE 555

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            LS+   LA +  G Q+H   +K+    + +V NA +D+Y K   + E  ++  +     
Sbjct: 556 CLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRP 615

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              +N +I+ YA    +KE+ + F+++           F  LLS  ++   +  G   + 
Sbjct: 616 QQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYN 675

Query: 300 QTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNL 357
               +  +S  +K    +VD+  + GRF EA+     +  + + + W +++S+     NL
Sbjct: 676 SMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNL 735

Query: 358 E 358
           E
Sbjct: 736 E 736


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/585 (38%), Positives = 350/585 (59%), Gaps = 3/585 (0%)

Query: 167 HLGFKPSDFT-FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           H+   P+ +  + + L + V    +  GRQ+H  ++ +    +  +A  L+DLY+    V
Sbjct: 54  HIASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLV 113

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
             AR+LF  MP+ +   +NV+I  YA +  ++ +++L+R +     +   F +   L   
Sbjct: 114 GHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKAC 173

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           A  LDL+ GR++H + + T    ++ V   LVDMYAKCG  ++A+ +F  +    +V W 
Sbjct: 174 AALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWN 233

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           +MI+AY Q G   EAL+L  +M    +    AT  S + A+A+ A+L  G++LH F  R 
Sbjct: 234 SMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRR 293

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           GF       ++L+DMYAKSG ++ A   F+++ +R +VSWNA+I     +G     LK F
Sbjct: 294 GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLF 353

Query: 466 EDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
             M V++   PD+++ + VLSAC+H G+++E  ++F  M   Y ++P  +H+  +VD+L 
Sbjct: 354 NKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLG 413

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
            +G F+EA  L+  MP +PD  +W +++N C+IHKN+E  + A  +L ++E   DA  YV
Sbjct: 414 HAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEP-EDAGNYV 472

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            +SNIYA +G+WE  ++V+K M  RG++K+   SW+ELK K H F   D  HP++ EI  
Sbjct: 473 LLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYE 532

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           ++E L   M   GY PDT    HD  ++ K   ++ HSERLAIAF LI+TP G+ +LV K
Sbjct: 533 ELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTK 592

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH  IKLIS+I  REI +RD +R+HHF +G CSC+D+W
Sbjct: 593 NLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 194/394 (49%), Gaps = 16/394 (4%)

Query: 69  SDPD-YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           S P+ Y  + ++L  C    +     Q+H  ++  G     ++   LVD Y     +  A
Sbjct: 57  SSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHA 116

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RR+F  MP+++   +N LI  +A++G +E AI+L+  M   G +P +FT+  AL A   L
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+  GR+VH  V+ T++ E++FV   L+D+Y+K  CV +AR +F  +   D V +N MI
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y  N +  E+L L R++       +     + +S  A+   L  GR++H         
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            + K+  SLVDMYAK G  + A+ +F  L     V W AMI  Y   G+ +EAL LF +M
Sbjct: 297 RQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356

Query: 368 -CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-------GSALLD 419
              A ++ D  TF  +L A      +   K+        G M +V+S        + L+D
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF------GLMVDVYSIKPTVQHFTCLVD 410

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +   +G  ++A    K MP + +   W AL++ C
Sbjct: 411 VLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGC 444



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 7/369 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV    L+  Y   G +  AR LF+ M  R    W +LI  Y++      A +L+  M 
Sbjct: 96  DTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGM- 154

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G +PD  T+   L  C+         +VH  ++   +   + +C  LVD Y K  C+
Sbjct: 155 VDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCV 214

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D AR VF  +  +DSV +N++I  + + G   EA+ L  +M   G  P+  T  + +SA 
Sbjct: 215 DDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAA 274

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  GR++H F  +  F     +  +L+D+Y+K   V  AR LF ++ + + VS+N
Sbjct: 275 ADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWN 334

Query: 245 VMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y  +  + E+LKLF +++   +       F  +LS   +   ++  ++     + 
Sbjct: 335 AMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVD 394

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---E 358
             +I   V+    LVD+    GRFEEA ++   +     +  W A+++      N+   E
Sbjct: 395 VYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGE 454

Query: 359 EALNLFIEM 367
            AL   IE+
Sbjct: 455 LALQKLIEL 463



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 10/170 (5%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+ + T+ L+  Y KSG +  AR LF  ++ R  VSW  +I GY     F EA KLF  M
Sbjct: 298 QDKLKTS-LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDT---ANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           R +    PD +TF  +LS C+       A E   +  D+           C  LVD    
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTC--LVDVLGH 414

Query: 121 IRCLDLARRVFKEMP-QKDSVSFNALITG---FAKEGLNEEAIKLFVEMQ 166
               + A  + K MP Q DS  + AL+ G        L E A++  +E++
Sbjct: 415 AGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELE 464


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/690 (35%), Positives = 386/690 (55%), Gaps = 43/690 (6%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKEMPQKDSVSFNALITGFA 150
           +HA +IK G ++     + L++ +C +         A  VF  + + + + +N +  G A
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHA 65

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                  A+KL++ M  LG  P  +TF   L +         G+Q+H  V+K  F  +++
Sbjct: 66  LSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIY 125

Query: 211 VANALLDLY---------------SKHDCVV----------------EARKLFGEMPEVD 239
           V  +L+ +Y               S H  VV                 A+KLF E+P  D
Sbjct: 126 VHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKD 185

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
            VS+N MI+ Y     YKE+L+LF+E +  T     +    T++S  A    +++GR +H
Sbjct: 186 VVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVH 245

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +        S +K+ N+L+D+Y+K G  E A E+F  L +   + W  +I  Y      +
Sbjct: 246 SWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYK 305

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFS-GS 415
           EAL LF EM R+  + +  T  SIL A A L ++ +G+ +H ++ +   G ++NV S  +
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365

Query: 416 ALLDMYAKSGSLKDAIQTF-KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +L+DMYAK G +  A Q F   M  R++ +WNA+IS  A +G A A    F  M  +G +
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           PD ++ + +LSACSH G+++ G   F SMT+ Y++ PK EHY  M+D+L  SG F EAE+
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           ++  MP EPD ++W S++ +C+IH NLE  +  A +L K+E   ++  YV +SNIYA AG
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEP-GNSGSYVLLSNIYAAAG 544

Query: 595 QWESVSQVKKAMRERGV-RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           +W  V++++  + ++G+ +KV   S +E+ S VH F   D+LHPQ  EI   +E +   +
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLL 604

Query: 654 KKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCH 713
           ++ G+ PDTS  L + +EE +  +L++HSE+LAIAF LI+T  G+ + +MKNLR C +CH
Sbjct: 605 EEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCH 664

Query: 714 AAIKLISKITGREITVRDSSRFHHFKDGFC 743
            A KLISKI  REI  RD +RF HF+DG C
Sbjct: 665 EATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 229/476 (48%), Gaps = 45/476 (9%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  +F+++ +   + W  +  G++  +    A KL++ M    G  PD  TF  LL  C+
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVM-ISLGLLPDSYTFPFLLKSCA 100

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV-------------- 130
           +     E  Q+H  ++K G++  + +  SL+  Y +   L+ AR+V              
Sbjct: 101 KSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTA 160

Query: 131 -----------------FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKP 172
                            F E+P KD VS+NA+I+G+ + G  +EA++LF EM  +   +P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220

Query: 173 SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF 232
            + T    +SA      I LGR VH+++    F  N+ + NAL+DLYSK   V  A +LF
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELF 280

Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
             +   D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+   + 
Sbjct: 281 DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 340

Query: 293 IGRQIHT------QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF-ANLSHISTVPWT 345
           IGR IH       + +VT   S   +  SL+DMYAKCG  + A+++F +++S+ S   W 
Sbjct: 341 IGRWIHVYINKKLKGVVTNVSS---LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           AMIS +   G    A ++F  M    I  D  TF  +L A +    L LG+ +   + R 
Sbjct: 398 AMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG 457

Query: 406 GFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++        ++D+   SG  K+A +    MP E + V W +L+ AC  +G+ +
Sbjct: 458 YEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 513



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 184/362 (50%), Gaps = 6/362 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ VS   LI+GYV  G + +A++LF+ +  +  VSW  +I GY +   ++EA +LF +
Sbjct: 152 HRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE 211

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M       PD  T  T++S C++ D+      VH+ I   G+ S L I N+L+D Y K  
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG 271

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F  +  KD +S+N LI G+    L +EA+ LF EM   G  P+D T  + L 
Sbjct: 272 EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 331

Query: 183 AGVGLADIALGRQVHAFVVK--TNFVENV-FVANALLDLYSKHDCVVEARKLF-GEMPEV 238
           A   L  I +GR +H ++ K     V NV  +  +L+D+Y+K   +  A+++F   M   
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
              ++N MI+ +A + +   +  +F  ++    +     F  LLS  ++   L +GR I 
Sbjct: 392 SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF 451

Query: 299 TQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGN 356
                   I+ +++    ++D+    G F+EA+E+   +      V W +++ A    GN
Sbjct: 452 RSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 511

Query: 357 LE 358
           LE
Sbjct: 512 LE 513



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 147/321 (45%), Gaps = 42/321 (13%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE---AKEIFANLSHISTVPWTAMISAY 351
           R IH Q I T   +     + L++       F+    A  +F  +   + + W  M   +
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
               +   AL L++ M    +  D  TF  +L++ A+      G+Q+H  V++ GF  ++
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 412 FSGSALLDMYAKSGSLKDAIQT-------------------------------FKEMPER 440
           +  ++L+ MYA++G L+DA +                                F E+P +
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 441 NIVSWNALISACAQNGDAQATLKSFED-MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++VSWNA+IS   + G+ +  L+ F++ M+ +  +PD  ++++V+SAC+    IE G ++
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG-RH 243

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            +S    +      +   +++D+  + G  + A +L   + +  D I W+++I     H 
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLIGG-YTHM 301

Query: 560 NLEFAKKAADQLFKMEKLRDA 580
           NL    K A  LF+ E LR  
Sbjct: 302 NL---YKEALLLFQ-EMLRSG 318


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/756 (32%), Positives = 407/756 (53%), Gaps = 16/756 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             + V    +++ Y + G+++ AR  F++MV R  VSW+ +I  Y+Q+    +A +LFV 
Sbjct: 74  GSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVR 133

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKI 121
           M  +G    + +TF ++L  C+          +H  I+  G     +I+ N++V+ Y K 
Sbjct: 134 MDHEG-VKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKC 192

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +DLAR VF+ M  K++V++N +I   ++    +EA  L  EM   G +P+  T  + +
Sbjct: 193 GEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVI 252

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +  I  GR VH  V       +  VANAL++LY K   +  AR     +   D +
Sbjct: 253 DACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKI 312

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+  ++  YA +   K ++ + + +         F F  LL        L +G +IH + 
Sbjct: 313 SWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRL 372

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             +    +  +  +LVDMY KCG  + A+  F  +S +  V  W A+++AYV +   +E 
Sbjct: 373 AESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKET 432

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA---- 416
           L +F  M    ++ D  TF SIL A A LA+L LG+  HS ++  G        SA    
Sbjct: 433 LGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLT 492

Query: 417 --LLDMYAKSGSLKDAIQTF---KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             +++MYAK GSL DA   F   +     ++V+W+A+++A +Q G ++  L+ F  M Q 
Sbjct: 493 TSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQE 552

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +PDSVS +S ++ CSH GL+ E + +F S+   + + P + H+A +VD+L R+G   E
Sbjct: 553 GVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIRE 612

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           AE LM + P       W +++++CR + +LE A++ A    ++  LR  + Y  +++++ 
Sbjct: 613 AEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVA---ARLASLRSGSAYSLLASVFC 669

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH-VFTANDELHPQTNEIRRKIENLM 650
           ++ +W+ V   ++++ ERG       SW+E+ ++V+  F  +D L P+  EI  ++E L 
Sbjct: 670 LSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLC 729

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
            E++K GY+ D    +HD  E+ K   L YHSE++A+ F LI+TPEG+P+ ++KN+  C 
Sbjct: 730 VEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQ 789

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           DCH  IK IS++  R IT+RD   FH F  G CSC+
Sbjct: 790 DCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSCK 825



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 262/531 (49%), Gaps = 11/531 (2%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M DR+  SW + I  Y++      A ++F  M  +G + PD V+   +L   +     ++
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVA-PDRVSCIAILDAFASLGDLSQ 59

Query: 92  LIQVHADIIKF-GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
               H  + +  G  S +++  +++  Y +   +  ARR F  M  ++ VS++A+I  +A
Sbjct: 60  GEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYA 119

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV-ENV 209
           + G   +A++LFV M H G K +  TF + L A   +  IALG+ +H  +V    + ++V
Sbjct: 120 QRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDV 179

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            + N ++++Y K   V  AR++F  M   + V++N MI   + +++YKE+  L  E+   
Sbjct: 180 ILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLD 239

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               ++    +++   A    +  GR +H         S+  VAN+LV++Y KCG+   A
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +     +     + WT +++AY + G+ + A+ +   M    +  D  TF ++L +   +
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNAL 448
           A+L+LG+++H  +  SG   +    +AL+DMY K G+   A + F  M + R++  WNAL
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           ++A       + TL  F  M   G  PD+V+ LS+L AC+    +  G    + M ++  
Sbjct: 420 LAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL 479

Query: 509 LRPKKEHYA-----SMVDILCRSGCFDE--AEKLMAQMPFEPDEIMWSSVI 552
              +    A     S++++  + G   +  AE   A+     D + WS+++
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMV 530



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 37/419 (8%)

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           M +    S+N+ I  YA N  +  +L++FR +        +     +L   A+  DL  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 295 RQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
              H      + + S+V VA +++ MY +CG    A+  F  +   + V W+AMI+AY Q
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-NVF 412
           +G+  +AL LF+ M    + A+  TF S+L A A + +++LGK +H  ++  G +  +V 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
            G+ +++MY K G +  A + F+ M  +N V+WN +I+AC+++   +       +M   G
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240

Query: 473 YQPDSVSLLSVLSACS-----------HCGLIEEGLQYFNSMTQKY--------KLRPKK 513
            +P+ ++L+SV+ AC+           H  +  EGL+  N++            KLR  +
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 514 E-----------HYASMVDILCRSGCFDEAEKLMAQMPFEP---DEIMWSSVINSCRIHK 559
                        + +++    R G    A  ++ +M  E    D   + +++ SC    
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            L   ++  D+L +     D     A+ ++Y   G  ++  +    M +  VR VT ++
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSD--VRDVTVWN 417


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/742 (31%), Positives = 393/742 (52%), Gaps = 80/742 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y   G+L   R +F++M  +    W  ++  Y++   F+E+  LF  M   G    
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 195

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
                   + G   P++A EL                                      F
Sbjct: 196 --------IEG-KRPESAFEL--------------------------------------F 208

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-- 189
            ++  +D +S+N++I+G+   GL E  + ++ +M +LG    D   A  +S  VG A+  
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI---DVDLATIISVLVGCANSG 265

Query: 190 -IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            ++LG+ VH+  +K++F   +  +N LLD+YSK   +  A ++F +M E + VS+  MI 
Sbjct: 266 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  + +   ++KL ++++           +++L   A    L  G+ +H         S
Sbjct: 326 GYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMES 385

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
            + V N+L+DMYAKCG  E A  +F+ +     + W  MI                    
Sbjct: 386 NLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------------------- 425

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T A +L A A L++L  GK++H +++R+G+ S+    +AL+D+Y K G L 
Sbjct: 426 -GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            A   F  +P +++VSW  +I+    +G     + +F +M  +G +PD VS +S+L ACS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+E+G ++F  M   + + PK EHYA MVD+L R+G   +A + +  +P  PD  +W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIW 604

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++  CR + ++E A+K A+++F++E   ++  YV ++NIYA A +WE V ++++ + +
Sbjct: 605 GALLCGCRNYHDIELAEKVAERVFELEP-ENSGYYVLLANIYAEAEKWEEVKRLREKIGK 663

Query: 609 RGVRKVTAYSWVELKSKVHVF-TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +G+RK    SW+E+K KV++F + N+  HP +  I   ++ + ++MK+EG+ P T  AL 
Sbjct: 664 QGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALI 723

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + DE  K  +L  HSE+LA+AF L+  P    I V KNLR C DCH   K +SK T REI
Sbjct: 724 NADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREI 783

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD +RFHHFKDG+CSCR FW
Sbjct: 784 VLRDPNRFHHFKDGYCSCRGFW 805



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 229/503 (45%), Gaps = 55/503 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLA--------------------TARELFNSMVDRTAVSW 40
           M  +N    N ++S Y K G+                      +A ELF+ + DR  +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISW 219

Query: 41  TILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII 100
             +I GY           ++  M   G  D D  T  ++L GC+   T +    VH+  I
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAI 278

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           K  +   +   N+L+D Y K   LD A RVF++M +++ VS+ ++I G+ ++G ++ AIK
Sbjct: 279 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIK 338

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L  +M+  G K       + L A      +  G+ VH ++   N   N+FV NAL+D+Y+
Sbjct: 339 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYA 398

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +  A  +F  M   D +S+N MI      E   +S  +                + 
Sbjct: 399 KCGSMEAANSVFSTMVVKDIISWNTMI-----GELKPDSRTM----------------AC 437

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L   A+   L+ G++IH   +     S+  VAN+LVD+Y KCG    A+ +F  +    
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT MI+ Y   G   EA+  F EM  A I  D+ +F SIL A +    L  G +   
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF- 556

Query: 401 FVIRSGFM--SNVFSGSALLDMYAKSGSLKDA---IQTFKEMPERNIVSWNALISACAQN 455
           +++++ F     +   + ++D+ +++G+L  A   I+T    P+  I  W AL+  C   
Sbjct: 557 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATI--WGALLCGCRNY 614

Query: 456 GDAQATLKSFEDMVQ-----SGY 473
            D +   K  E + +     SGY
Sbjct: 615 HDIELAEKVAERVFELEPENSGY 637



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 203/472 (43%), Gaps = 84/472 (17%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +NA I  F + G  E A++L    +    +    T+++ L    GL     G++VH+ + 
Sbjct: 69  YNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
             +   +  +   L+  Y+    + E R++F  M + +   +N M++ YA    +KES+ 
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 262 LFR------------ELQFTRFDR------------------------------------ 273
           LF+            E  F  FD+                                    
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 274 SQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                +T++SV+   AN   L +G+ +H+  I ++    +  +N+L+DMY+KCG  + A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +   + V WT+MI+ Y + G  + A+ L  +M +  +  D     SIL A A   
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  GK +H ++  +   SN+F  +AL+DMYAK GS++ A   F  M  ++I+SWN +I 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
                                  +PDS ++  VL AC+    +E G +        Y LR
Sbjct: 427 E---------------------LKPDSRTMACVLPACASLSALERGKE-----IHGYILR 460

Query: 511 ---PKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
                  H A ++VD+  + G    A  L   +P   D + W+ +I    +H
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMH 511


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/627 (36%), Positives = 366/627 (58%), Gaps = 10/627 (1%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + + + D  S+N++I   A+ G + EA++ F  M+ L   P+  +F  A+ A   L DI 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIF 93

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q H       +  ++FV++AL+ +YS    + +ARK+F E+P+ + VS+  MI  Y 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPF------STLLSVVANKLDLQIGRQIHTQTIVTT 305
            N    +++ LF++L     D     F       +++S  +      +   IH+  I   
Sbjct: 154 LNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG 213

Query: 306 AISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               V V N+L+D YAK G      A++IF  +     V + +++S Y Q G   EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDV 273

Query: 364 FIEMCRANI-SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  + +  + + +  T +++L A +   +L +GK +H  VIR G   +V  G++++DMY 
Sbjct: 274 FRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A   F  M  +N+ SW A+I+    +G A   L+ F  M+ SG +P+ ++ +S
Sbjct: 334 KCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+ACSH GL + G  +FN+M  ++ + P  EHY  MVD+L R+G   +A  L+ +M  E
Sbjct: 394 VLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKME 453

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+WSS++ +CRIHKN+E A+ +  +LF+++   +   Y+ +S+IYA +G+W+ V +V
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDP-SNCGYYMLLSHIYADSGRWKDVERV 512

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+ RG+ K   +S +EL  +VHVF   DE HPQ  +I   +  L +++ + GY  +T
Sbjct: 513 RMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           S   HD DEE K  +L+ HSE+LAIAF ++NT  GS + V+KNLR C+DCH  IKLISKI
Sbjct: 573 SSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKI 632

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             RE  VRD+ RFHHFKDGFCSC D+W
Sbjct: 633 VDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 219/451 (48%), Gaps = 30/451 (6%)

Query: 21  NLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           NL T   LFN  VD+T V SW  +I   ++     EA + F  MR      P   +F   
Sbjct: 27  NLTT---LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLY-PTRSSFPCA 82

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +  CS         Q H     FGY S + + ++L+  Y     L+ AR+VF E+P+++ 
Sbjct: 83  IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD---------FTFAAALSAGVGLADI 190
           VS+ ++I G+   G   +A+ LF   + L  + +D             + +SA   +A  
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLF---KDLLIEENDDDATMFLDSMGMVSVISACSRVAAK 199

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSK--HDCVVEARKLFGEMPEVDGVSYNVMIT 248
            L   +H+FV+K  F   V V N LLD Y+K     V  ARK+F ++ + D VSYN +++
Sbjct: 200 GLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS 259

Query: 249 CYAWNEQYKESLKLFREL---QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            YA +    E+  +FR L   +   F+      ST+L  V++   L+IG+ IH Q I   
Sbjct: 260 VYAQSGMSNEAFDVFRRLIKEKVVTFN--CITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              +V V  S++DMY KCGR E A+  F  + + +   WTAMI+ Y   G+  +AL LF 
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKS 424
            M  + +  +  TF S+L A +      +G    ++   R G    +     ++D+  ++
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437

Query: 425 GSLK---DAIQTFKEMPERNIVSWNALISAC 452
           G L+   D IQ  K  P+  I  W++L++AC
Sbjct: 438 GFLQKAYDLIQKMKMEPDSII--WSSLLAAC 466



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 4/186 (2%)

Query: 10  NMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L+  Y K G   +A AR++F+ +VD+  VS+  ++  Y+Q     EAF +F  +  + 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEK 281

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
               + +T +T+L   S          +H  +I+ G    +I+  S++D YCK   ++ A
Sbjct: 282 VVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GV 185
           R  F  M  K+  S+ A+I G+   G   +A++LF  M   G +P+  TF + L+A    
Sbjct: 342 RLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401

Query: 186 GLADIA 191
           GL D+ 
Sbjct: 402 GLHDVG 407


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/702 (33%), Positives = 384/702 (54%), Gaps = 30/702 (4%)

Query: 48  SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           S++ + +EA     +M  D        ++  L   C +  +  +   +H  + +   N  
Sbjct: 63  SKQGKLKEAHDFLKEM-DDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
             I N L+  YC        ++VF EM  K+ VS+  +I+ +AK G  E+AI+LF +MQ 
Sbjct: 122 GSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA 181

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G +P+   + + L + +G + + LG+Q+H+ V++     N+ V  A+ ++Y +   +  
Sbjct: 182 SGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEG 241

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A+ +F  M   + V++  ++  Y   ++ + +L+LF  +     +  +F FS +L V   
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
             D  +G+QIH+  +     SEV V   LVD Y KCG  E A   F  +S  + V W+A+
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           IS + Q G LE+ + +F  +    +  +   + S+ +A A  A+L++G Q H   I+ G 
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGL 421

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
           +S ++  SA++ MY+K G L  A + F+ + E + V+W A+IS  A +G+A   L  F  
Sbjct: 422 VSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRR 481

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M   G +P++V+ ++VL+ACSH GL+ E  QY  SM++ Y ++P  +HY  M+D   R+G
Sbjct: 482 MQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
              EA +L+ +MPFEPD + W S++  C  H +L+  K AA+ LF+++   D A Y+ + 
Sbjct: 542 LLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDP-GDTAGYILLF 600

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
           N+Y+  G+WE    V+K M ER ++K  + SW+ +K +VH                R + 
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH----------------RPVR 644

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
            L +E        D SC+L       + E L  HSE+LAIAF LI+T + +PILV KNLR
Sbjct: 645 LLNEE-------DDVSCSL-----PARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLR 692

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AC DCH   K +S +TGR+I VRDS+RFHHFK G CSC D+W
Sbjct: 693 ACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 228/450 (50%), Gaps = 3/450 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G+    +++F+ M+ +  VSW I+I  Y++  +  +A +LF DM+   G 
Sbjct: 126 NCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS-GI 184

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+   + +LL  C  P       Q+H+ +I+   N+ + +  ++ + Y +   L+ A+ 
Sbjct: 185 RPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKL 244

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M  +++V++  L+ G+ +    E A++LF  M   G +  +F F+  L     L D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLED 304

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G+Q+H+ +VK      V V   L+D Y K   +  A + FG + E + VS++ +I+ 
Sbjct: 305 WDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           ++ + + ++ +K+F  L+      + F ++++    A + +L +G Q H   I    +S 
Sbjct: 365 FSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY 424

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +   +++V MY+KCGR + A+  F ++     V WTA+IS Y   GN  EAL  F  M  
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQS 484

Query: 370 ANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +  TF ++L A +    ++  KQ L S     G    +     ++D Y+++G L 
Sbjct: 485 YGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLX 544

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +A++    MP E + +SW +L+  C  + D
Sbjct: 545 EALELINRMPFEPDAMSWKSLLGGCWAHCD 574



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 2/418 (0%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N  +   +K+G  +EA     EM       +  ++     A   L  +A GR +H  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T    +  + N LL +Y      ++ +K+F EM   + VS+ ++I+ YA N + +++++L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F ++Q +    +   + +LL        L++G+Q+H+  I     + + V  ++ +MY +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR 235

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  E AK +F  +   + V WT ++  Y Q   LE AL LF  M    +  D+  F+ +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L+    L    +GKQ+HS +++ G  S V  G+ L+D Y K G ++ A ++F  + E N 
Sbjct: 296 LKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPND 355

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           VSW+ALIS  +Q+G  +  +K F  +   G   +S    SV  AC+    +  G Q    
Sbjct: 356 VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGD 415

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             ++  L       ++MV +  + G  D A +    +  EPD + W+++I+    H N
Sbjct: 416 AIKR-GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 199/451 (44%), Gaps = 57/451 (12%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N      + + YV+ G L  A+ +F+ M  + AV+WT L+ GY+Q  +   A +LF  
Sbjct: 220 NANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFAR 279

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G + D   F+ +L  C   +  +   Q+H+ I+K G  S + +   LVD Y K  
Sbjct: 280 MAME-GVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCG 338

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A R F  + + + VS++ALI+GF++ G  E+ IK+F  ++  G   + F + +   
Sbjct: 339 DIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQ 398

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A    A++ +G Q H   +K   V  ++  +A++ +YSK   +  AR+ F  + E D V+
Sbjct: 399 ACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVA 458

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I+ YA++    E+L  FR +Q      +   F  +L+  ++               
Sbjct: 459 WTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS-------------- 504

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT-----AMISAYVQKGNL 357
                                G   EAK+   ++S    V  T      MI  Y + G L
Sbjct: 505 ---------------------GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR------SGFMSNV 411
            EAL L   + R     D  ++ S+L        L LGK     + R      +G++   
Sbjct: 544 XEALEL---INRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYI--- 597

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
                L ++Y+  G  ++A    K M ER +
Sbjct: 598 ----LLFNLYSAFGKWEEAGHVRKLMAEREL 624


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/746 (32%), Positives = 411/746 (55%), Gaps = 22/746 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V    L+  Y K        +L   + D   VSWT +I    + +++ EA +L+V M 
Sbjct: 151 NHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKM- 209

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRC 123
            + G  P+  TF  LL   S         +V H+ +I FG    L++  +++  Y K R 
Sbjct: 210 IEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRR 269

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A +V ++ P+ D   + ++I+GF +     EA+   V+M+  G  P++FT+A+ L+A
Sbjct: 270 MEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNA 329

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK--HDCVVEARKLFG-EMPEVDG 240
              +  + LG Q H+ V+      +++V NAL+D+Y K  H      +   G  +P V  
Sbjct: 330 SSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNV-- 387

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  +I  +A +   +ES++LF E+Q      + F  ST+L   +    +   +++H  
Sbjct: 388 ISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGY 447

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I T    ++ V N+LVD YA  G  +EA  +   ++H   + +T + +   Q+G+ E A
Sbjct: 448 IIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMA 507

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L +   MC   +  D+ + AS + A+A L  +  GKQLH +  +SGF       ++L+  
Sbjct: 508 LRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHS 567

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K GS++DA + FK++ E + VSWN LIS  A NG     L +F+DM  +G +PDSV+ 
Sbjct: 568 YSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTF 627

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           LS++ ACS   L+ +GL YF SM + Y + PK +HY  +VD+L R G  +EA  ++  MP
Sbjct: 628 LSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMP 687

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           F+PD +++ +++N+C +H N+   +  A +  +++   D A Y+ ++++Y  AG  +   
Sbjct: 688 FKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPC-DPAIYLLLASLYDNAGLPDFGD 746

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           + +K MRERG+R+     W+E+KSK+++F+A +++    +EI  K+E+L+ E+K  GY  
Sbjct: 747 KTRKLMRERGLRRSPRQCWMEVKSKIYLFSAREKI--GNDEINEKLESLITEIKNRGYPY 804

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
             S            E   YHSE+LA+AF +++ P  +PI + KN   CT CH+ I L++
Sbjct: 805 QES------------EDKLYHSEQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLT 852

Query: 721 KITGREITVRDSSRFHHFKDGFCSCR 746
           +   REI VRD  RFH FKDG CSCR
Sbjct: 853 QFVDREIIVRDRKRFHVFKDGQCSCR 878



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 230/416 (55%), Gaps = 3/416 (0%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T   +LS C+   T  E   VH+ IIK G    L + N+L+  Y K   +  AR +F EM
Sbjct: 19  TCLQVLSLCNS-QTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM 77

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P +D VS+  L++   +   + EA++LF  M   G  P++FT ++AL +   L +   G 
Sbjct: 78  PHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGA 137

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++HA VVK     N  +   L+DLY+K DC VE  KL   + + D VS+  MI+      
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETS 197

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVA 313
           ++ E+L+L+ ++       ++F F  LL + +   L    G+ +H+Q I       + + 
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +++ MYAKC R E+A ++           WT++IS +VQ   + EA+N  ++M  + I 
Sbjct: 258 TAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGIL 317

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK-SGSLKDAIQ 432
            +  T+AS+L AS+ + SL LG+Q HS VI  G   +++ G+AL+DMY K S +  + ++
Sbjct: 318 PNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVK 377

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            F+ +   N++SW +LI+  A++G  + +++ F +M  +G QP+S +L ++L ACS
Sbjct: 378 AFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACS 433



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 295/638 (46%), Gaps = 45/638 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K   +  AR LF+ M  R  VSWT L+  +++     EA +LF DM    G
Sbjct: 54  SNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLF-DMMLGSG 112

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T ++ L  CS         ++HA ++K G     ++  +LVD Y K  C     
Sbjct: 113 QCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPH 172

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS--AGVG 186
           ++   +   D VS+  +I+   +     EA++L+V+M   G  P++FTF   L   + +G
Sbjct: 173 KLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLG 232

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L     G+ +H+ ++      N+ +  A++ +Y+K   + +A K+  + P+ D   +  +
Sbjct: 233 LGK-GYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSI 291

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ +  N Q +E++    +++ +    + F +++LL+  ++ L L++G Q H++ I+   
Sbjct: 292 ISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGL 351

Query: 307 ISEVKVANSLVDMYAKCGR-FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             ++ V N+LVDMY KC        + F  ++  + + WT++I+ + + G  EE++ LF 
Sbjct: 352 EGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFA 411

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           EM  A +  +  T ++IL A +++ S+   K+LH ++I++    ++  G+AL+D YA  G
Sbjct: 412 EMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGG 471

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
              +A      M  R+I+++  L +   Q GD +  L+    M     + D  SL S +S
Sbjct: 472 MADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFIS 531

Query: 486 ACSHCGLIEEGLQYF---------------NSMTQKYK---------------LRPKKEH 515
           A +  G++E G Q                 NS+   Y                  P +  
Sbjct: 532 AAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVS 591

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPF---EPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           +  ++  L  +G   +A      M     +PD + + S+I +C          +  D  +
Sbjct: 592 WNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFAC---SQGSLLNQGLDYFY 648

Query: 573 KMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAM 606
            MEK     P    YV + ++    G+ E    V + M
Sbjct: 649 SMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETM 686



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 132/270 (48%), Gaps = 1/270 (0%)

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
           + N   L+ G  +H+  I      ++ ++N+L+ +YAKC    +A+ +F  + H   V W
Sbjct: 26  LCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSW 85

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           T ++SA+ +  +  EAL LF  M  +    ++ T +S LR+ + L     G ++H+ V++
Sbjct: 86  TTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVK 145

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G   N   G+ L+D+Y K     +  +    + + ++VSW  +IS+  +       L+ 
Sbjct: 146 LGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQL 205

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           +  M+++G  P+  + + +L   S  GL +   +  +S    + +        +++ +  
Sbjct: 206 YVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYA 265

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +    ++A K+  Q P + D  +W+S+I+ 
Sbjct: 266 KCRRMEDAIKVSQQTP-KYDVCLWTSIISG 294


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 263/760 (34%), Positives = 423/760 (55%), Gaps = 69/760 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +PN+ + S   +I  YV S  +  AR LF+SM    A +W I+I  Y++ N+  +A +LF
Sbjct: 70  LPNEYSWSC--IIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELF 127

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M     S  D V++A L++G +  D   E                             
Sbjct: 128 HGMI----SGRDVVSWAILVAGYARHDRLEE----------------------------- 154

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
                 A  +F+ MP  D+V+  +++ G+A  G   EA +LF  +   G +  D T   A
Sbjct: 155 ------ASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDR--DATACNA 206

Query: 181 LSAGVGL-ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           + A  G  A + L   + A +     + N    + LL  Y+++  +  A+K F  MP+ D
Sbjct: 207 MIAAYGKNARVDLAEGLFAQIK----LRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRD 262

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            +++  M    +   + + + ++ R L           ++ LL   +   DL   R++ +
Sbjct: 263 SIAFTAMTAVLSDQGELRGAREMLRYLSAV----DVIAWNALLEGYSRTGDLDEVRRLFS 318

Query: 300 ----QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
               +T+ TT      VA +LV++Y KCGR ++A+ +   +   ++V WTAMI+AY Q G
Sbjct: 319 AMEHRTVATTV-----VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNG 373

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--FMSNVFS 413
           N  EA+NLF  M          T  S++ + A L +LSLGK++H+  IRS   F  ++  
Sbjct: 374 NAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHAR-IRSSPLFSQSLML 432

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQATLKSFEDMV-Q 470
            +A++ MY K G+L+ A + F+ +P   R++V+W A+I A AQNG  +  ++ F++MV  
Sbjct: 433 LNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVID 492

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            G +P+ V+ LSVLSACSH G +E+  ++F SM   + + P  +HY  +VD+L R+G   
Sbjct: 493 GGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLG 552

Query: 531 EAEKLMAQMP-FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           EAEKL+ +   FE D + W + +++C+++ +LE +++AA ++ ++E   + A  V +SN+
Sbjct: 553 EAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEP-ENVAGRVLLSNV 611

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA  G+   V++++  M+  GV+K    SW+E+ ++VH F  +D  HP+  EI  ++E L
Sbjct: 612 YAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERL 671

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
            +E+K+ GY PDT   L D DEE K + L YHSERLA+A  +I+TP G+ + V+KNLR C
Sbjct: 672 HREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVC 731

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +DCHAA K IS+I GR+I VRD+SRFHHFKDG CSC D+W
Sbjct: 732 SDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 65/314 (20%)

Query: 293 IGRQIHTQTIVTTAISEV------KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           IGR++H   I+   I+        ++ N L+D++ KCG  + A+ +F  +   +   W+ 
Sbjct: 19  IGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSC 78

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           +I AYV    + +A  LF  M                                      G
Sbjct: 79  IIQAYVSSSRIHDARALFDSM-------------------------------------PG 101

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSF 465
           F  + F+ + ++  YA+   L DA + F  M   R++VSW  L++  A++   +     F
Sbjct: 102 F--DAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRLEEASALF 159

Query: 466 EDMVQSGYQP--DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--SMVD 521
             M      P  D+V+  SVL   +H G + E  + F+ +         ++  A  +M+ 
Sbjct: 160 RRM------PLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGA----GDRDATACNAMIA 209

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
              ++   D AE L AQ+    +   WS ++ +   + +L+ AKK+ D++ +    RD+ 
Sbjct: 210 AYGKNARVDLAEGLFAQIKLR-NAASWSLLLLTYAQNGHLDLAKKSFDRMPQ----RDSI 264

Query: 582 PYVAMSNIYAVAGQ 595
            + AM+ + +  G+
Sbjct: 265 AFTAMTAVLSDQGE 278


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/704 (34%), Positives = 378/704 (53%), Gaps = 33/704 (4%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC-LDLARRVFKEMPQ 136
           TL S  S   +   L QVHA I++   +    +   LV S C +   LD A  VF  +P+
Sbjct: 25  TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
            ++   N  +   ++    E+ + ++  M+  G     F+F   L A   +  +  G ++
Sbjct: 85  PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H    K  F  + FV   L+ +Y+    + EAR +F +M   D V++++MI  Y  +  +
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLF 204

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            ++L LF E++    +  +   ST+LS      +L  G+ IH   +    + +  + ++L
Sbjct: 205 NDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSAL 264

Query: 317 VDMYAKCG-------------------------------RFEEAKEIFANLSHISTVPWT 345
           V MYA CG                               + E A+ +F  +     V W+
Sbjct: 265 VTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWS 324

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           AMIS Y +  + +EALNLF EM    I  DQ T  S++ A A L +L   K +H FV ++
Sbjct: 325 AMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN 384

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           GF   +   +AL++MYAK GSL+ A + F +MP +N++SW  +ISA A +GDA + L+ F
Sbjct: 385 GFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFF 444

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
             M     +P+ ++ + VL ACSH GL+EEG + F SM  ++ + PK  HY  MVD+  R
Sbjct: 445 HQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR 504

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +    EA +L+  MP  P+ I+W S++ +CR+H  +E  + AA +L +++   D A +V 
Sbjct: 505 ANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGA-HVF 563

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SNIYA A +WE V QV+K M+ +G+ K    S  EL +++H F   D  H   +EI  K
Sbjct: 564 LSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEK 623

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +  ++ ++K  GY P+T   L D +EE K E + +HSE+LA+ + L+    GS I ++KN
Sbjct: 624 LYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKN 683

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH  IKL SK+  REI VRD +RFHH+KDG CSC+D+W
Sbjct: 684 LRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 225/482 (46%), Gaps = 34/482 (7%)

Query: 11  MLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           ++IS    S +L  A  +FN +           +   S+  +  +   ++  MRT G + 
Sbjct: 61  LVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLA- 119

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
            D  +F  LL   S   +  E +++H    K G++S   +   LV  Y     +  AR +
Sbjct: 120 VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLM 179

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F +M  +D V+++ +I G+ + GL  +A+ LF EM++   +P +   +  LSA     ++
Sbjct: 180 FDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNL 239

Query: 191 ALGRQVHAFVVKTNFV-------------------------------ENVFVANALLDLY 219
           + G+ +H F+++ N V                               +N+  + A++  Y
Sbjct: 240 SYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGY 299

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   +  AR +F +M + D V ++ MI+ YA ++  +E+L LF E+Q       Q    
Sbjct: 300 SKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTML 359

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           ++++  A+   L   + IH           + + N+L++MYAKCG  E A+ IF  +   
Sbjct: 360 SVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK 419

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL- 398
           + + WT MISA+   G+   AL  F +M   NI  +  TF  +L A +    +  G+++ 
Sbjct: 420 NVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF 479

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +S +              ++D++ ++  L++A++  + MP   N++ W +L++AC  +G+
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539

Query: 458 AQ 459
            +
Sbjct: 540 IE 541


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/645 (35%), Positives = 357/645 (55%), Gaps = 44/645 (6%)

Query: 111 CNS-----LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
           CNS     L+ +Y  ++ +  AR+VF E+P+++ +  N +I  +   G   E +K+F  M
Sbjct: 72  CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
                +P  +TF   L A      I +GR++H    K      +FV N L+ +Y K   +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
            EAR +  EM   D VS+N ++  YA N+++ ++L++ RE++  +        ++LL  V
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +N                T  +  VK      DM+ K G+              S V W 
Sbjct: 252 SN--------------TTTENVMYVK------DMFFKMGK-------------KSLVSWN 278

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            MI  Y++     EA+ L+  M       D  +  S+L A  + ++LSLGK++H ++ R 
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
             + N+   +AL+DMYAK G L+ A   F+ M  R++VSW A+ISA   +G     +  F
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
             +  SG  PDS++ ++ L+ACSH GL+EEG   F  MT  YK+ P+ EH A MVD+L R
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EA + +  M  EP+E +W +++ +CR+H + +    AAD+LF++     +  YV 
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP-EQSGYYVL 517

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SNIYA AG+WE V+ ++  M+ +G++K    S VE+   +H F   D  HPQ++EI R+
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE-----GSPI 700
           ++ L+++MK+ GY PD+  ALHD +EE K   L  HSE+LAI FAL+NT E      + I
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
            + KNLR C DCH A KLIS+IT REI +RD++RFH F+ G CSC
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 41/469 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y    ++A+AR++F+ + +R  +   ++I  Y     + E  K+F  M       P
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRP 138

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+ TF  +L  CS   T     ++H    K G +S L + N LV  Y K   L  AR V 
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EM ++D VS+N+L+ G+A+    ++A+++  EM+ +       T A+ L A        
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-------- 250

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                    V     ENV        +Y K         +F +M +   VS+NVMI  Y 
Sbjct: 251 ---------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E+++L+  ++   F+      +++L    +   L +G++IH        I  + 
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+DMYAKCG  E+A+++F N+     V WTAMISAY   G   +A+ LF ++  + 
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDA 430
           +  D   F + L A +    L  G+     +     ++      A ++D+  ++G +K+A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465

Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
            +  ++M  E N   W AL+ AC  + D    L + + +      QSGY
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 36/343 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+S Y K G L+ AR + + M  R  VSW  L+ GY+Q  +F +A ++  +M +   S
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D  T A+LL   S   T N +                                   + 
Sbjct: 239 H-DAGTMASLLPAVSNTTTENVM---------------------------------YVKD 264

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F +M +K  VS+N +I  + K  +  EA++L+  M+  GF+P   +  + L A    + 
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++LG+++H ++ +   + N+ + NAL+D+Y+K  C+ +AR +F  M   D VS+  MI+ 
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
           Y ++ +  +++ LF +LQ +        F T L+  ++   L+ GR           I+ 
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
            ++    +VD+  + G+ +EA     ++S   +   W A++ A
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 8/331 (2%)

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
           D++  R +H++ I+        +   L+  YA       A+++F  +   + +    MI 
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
           +YV  G   E + +F  MC  N+  D  TF  +L+A +   ++ +G+++H    + G  S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
            +F G+ L+ MY K G L +A     EM  R++VSWN+L+   AQN      L+   +M 
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGC 528
                 D+ ++ S+L A S+     E + Y   M   +K+  K    +  M+ +  ++  
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMF--FKMGKKSLVSWNVMIGVYMKNAM 289

Query: 529 FDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
             EA +L ++M    FEPD +  +SV+ +C     L   KK    + + + + +     A
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           + ++YA  G  E    V + M+ R V   TA
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 34/189 (17%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +  N LI  Y K G L  AR++F +M  R  VSWT +I  Y    +  +A  LF  ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD + F T L+ CS           HA +++ G +                 C 
Sbjct: 403 -DSGLVPDSIAFVTTLAACS-----------HAGLLEEGRS-----------------CF 433

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            L    +K  P+ + ++   ++    + G  +EA +    +Q +  +P++  + A L A 
Sbjct: 434 KLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRF---IQDMSMEPNERVWGALLGAC 488

Query: 185 VGLADIALG 193
              +D  +G
Sbjct: 489 RVHSDTDIG 497


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/616 (35%), Positives = 353/616 (57%), Gaps = 6/616 (0%)

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q  + S+NA +   A++   +EA+ L+ +M   G  P+ FTF  A  +   L+    G Q
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD--GVSYNVMITCYAWN 253
           +H  V+KT      FV  +L+ +Y K   +  ARK+F E        V YN +I  Y+ N
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            ++ +++ LFR+++      +      L+ V A  + L  G  +H  ++      ++ V 
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N L+ MY +CG  + A+++F  +     + W AMIS Y Q G     L+L+ +M    I 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T   +L + A L + + G+++   +  SGF  N F  +AL++MYA+ G+L  A   
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M E+N++SW A+I+    +G  +  ++ F++M+ S   PD  + +SVLSACSH GL 
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           E+GL YF +M + Y L+P  EHY+ +VD+L R+G  +EA KL+  M  EPD  +W +++ 
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +C+IH+N+E A+ A +++ + E   +   YV +SNI++ AG  E + +V+  MRER ++K
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEP-TNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKK 496

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
               S+VE + ++H+F A D  HPQ  EI   ++ L   +K+ G   D        +EE+
Sbjct: 497 EPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDND--QESRNEEL 554

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
            +  +  HSE+LAIAF LINT  G+ I V+KNLR C DCH  +KL+S+I  R++ VRD++
Sbjct: 555 -ITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDAT 613

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK+G CSC+D+W
Sbjct: 614 RFHHFKNGVCSCKDYW 629



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 11/511 (2%)

Query: 33  VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANEL 92
           +  T  SW   +   +++  F+EA  L+  M   G S P+  TF      C+        
Sbjct: 17  LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDS-PNAFTFPFAFKSCASLSLPLAG 75

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE--MPQKDSVSFNALITGFA 150
            Q+H  +IK G      +  SL+  YCK   +  AR+VF E    +  +V +NALI G++
Sbjct: 76  SQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYS 135

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                 +A+ LF +M+  G   +  T    +    G   +  G  +HA  V+     ++ 
Sbjct: 136 LNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLS 195

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N LL +Y +   V  ARKLF  MPE   +++N MI+ YA N      L L+R+++FT 
Sbjct: 196 VGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTG 255

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                     +LS  A+      GR++  +  ++       + N+L++MYA+CG   +A+
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKAR 315

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            IF  ++  + + WTA+I+ Y   G  E A+ LF EM  ++   D A F S+L A +   
Sbjct: 316 AIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375

Query: 391 SLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
               G    + + R  G        S ++D+  ++G L++A +    M  E +   W AL
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGAL 435

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKY 507
           + AC  + + +    +FE +++  ++P ++    +LS   S  G + EG+     M ++ 
Sbjct: 436 LGACKIHRNVELAELAFEKVIE--FEPTNIGYYVLLSNIFSEAGNM-EGILRVRVMMRER 492

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           KL  KKE   S V+   R   F   ++   Q
Sbjct: 493 KL--KKEPGCSYVEYQGRIHLFLAGDRTHPQ 521



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 194/402 (48%), Gaps = 17/402 (4%)

Query: 12  LISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           LIS Y K   +A+AR++F  N      AV +  LI GYS  ++F +A  LF  MR +G S
Sbjct: 97  LISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVS 156

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             + VT   L+  C+ P        +HA  ++FG +  L + N L+  Y +   +D AR+
Sbjct: 157 -VNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARK 215

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F  MP+K  +++NA+I+G+A+ GL    + L+ +M+  G  P   T    LS+   L  
Sbjct: 216 LFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGA 275

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
            A GR+V   +  + F  N F+ NAL+++Y++   +V+AR +F  M E + +S+  +I  
Sbjct: 276 HAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAG 335

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + Q + +++LF E+  +        F ++LS  ++    + G    T       +  
Sbjct: 336 YGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQP 395

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE--------- 358
                S +VD+  + GR EEA+++  ++S       W A++ A     N+E         
Sbjct: 396 GPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKV 455

Query: 359 ---EALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
              E  N+   +  +NI ++      ILR    +    L K+
Sbjct: 456 IEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 9/243 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ YV+ G++  AR+LF+ M ++  ++W  +I GY+Q         L+  M    G 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT-GI 256

Query: 70  DPDYVTFATLLSGCSE--PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            PD VT   +LS C+      A   ++   ++  FG+N  L   N+L++ Y +   L  A
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK--NALINMYARCGNLVKA 314

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GV 185
           R +F  M +K+ +S+ A+I G+   G  E A++LF EM      P    F + LSA    
Sbjct: 315 RAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYN 244
           GL +  L     A              + ++DL  +   + EARKL G M  E DG  + 
Sbjct: 375 GLTEKGL-YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433

Query: 245 VMI 247
            ++
Sbjct: 434 ALL 436



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y + GNL  AR +F+ M ++  +SWT +I GY    Q   A +LF +M 
Sbjct: 294 NPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMI 353

Query: 65  TDGGSD--PDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +   SD  PD   F ++LS CS    T   L    A    +G        + +VD   + 
Sbjct: 354 S---SDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRA 410

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             L+ AR++   M  + D   + AL+ G  K   N E  +L  E + + F+P++  +   
Sbjct: 411 GRLEEARKLIGSMSVEPDGAVWGALL-GACKIHRNVELAELAFE-KVIEFEPTNIGYYVL 468

Query: 181 LS 182
           LS
Sbjct: 469 LS 470


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/559 (39%), Positives = 341/559 (61%), Gaps = 3/559 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G++VHA ++KT+++  V++   L+  Y K D + +AR +F  MPE + VS+  MI+ Y+ 
Sbjct: 77  GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                ++L LF ++  +  + ++F F+T+L+         +GRQIH+  I     + V V
Sbjct: 137 RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYV 196

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
            +SL+DMYAK G+  EA+ IF  L     V  TA+IS Y Q G  EEAL LF  + R  +
Sbjct: 197 GSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            ++  T+ S+L A + LA+L  GKQ+H+ ++RS   S V   ++L+DMY+K G+L  A +
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARR 316

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCG 491
            F  + ER ++SWNA++   +++G+ +  L+ F  M+ ++  +PDSV++L+VLS CSH G
Sbjct: 317 IFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGG 376

Query: 492 LIEEGLQYFNSMTQ-KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           L ++G+  F  MT  K  ++P  +HY  +VD+L R+G  + A + + +MPFEP   +W  
Sbjct: 377 LEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGC 436

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +C +H NL+  +    QL ++E   +A  YV +SN+YA AG+WE V  ++  M ++ 
Sbjct: 437 LLGACSVHSNLDIGEFVGHQLLQIEP-ENAGNYVILSNLYASAGRWEDVRSLRNLMLKKA 495

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           V K    SW+EL   +H F A+D  HP+  E+  K++ L    K+ GY PD SC LHD D
Sbjct: 496 VTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVD 555

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K + L  HSE+LA+ F LI TPE  PI V+KNLR C DCH   K  SKI GRE+++R
Sbjct: 556 EEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLR 615

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D +RFH    G CSC D+W
Sbjct: 616 DKNRFHRIVGGKCSCGDYW 634



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 219/410 (53%), Gaps = 10/410 (2%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
              + REA  L + +R   G D ++  + T+L+ C       E  +VHA +IK  Y   +
Sbjct: 38  HDTRLREAL-LHMALR---GLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCV 93

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            +   L+  Y K   L  AR VF  MP+++ VS+ A+I+ +++ G   +A+ LFV+M   
Sbjct: 94  YLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G +P++FTFA  L++ +G +   LGRQ+H+ ++K N+  +V+V ++LLD+Y+K   + EA
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEA 213

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R +F  +PE D VS   +I+ YA     +E+L+LFR LQ      +   ++++L+ ++  
Sbjct: 214 RGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGL 273

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             L  G+Q+H   + +   S V + NSL+DMY+KCG    A+ IF  L   + + W AM+
Sbjct: 274 AALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAML 333

Query: 349 SAYVQKGNLEEALNLFIEMCRAN-ISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
             Y + G   E L LF  M   N +  D  T  ++L   +       G  +  + + SG 
Sbjct: 334 VGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIF-YDMTSGK 392

Query: 408 MS---NVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA 453
           +S   +      ++DM  ++G ++ A +  K+MP E +   W  L+ AC+
Sbjct: 393 ISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACS 442



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 191/357 (53%), Gaps = 17/357 (4%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  YVK  +L  AR +F+ M +R  VSWT +I  YSQ+    +A  LFV M    G++P
Sbjct: 99  LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQM-LRSGTEP 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  TFAT+L+ C          Q+H+ IIK  Y + + + +SL+D Y K   +  AR +F
Sbjct: 158 NEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIF 217

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + +P++D VS  A+I+G+A+ GL+EEA++LF  +Q  G + +  T+ + L+A  GLA + 
Sbjct: 218 QCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALD 277

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+QVH  ++++     V + N+L+D+YSK   +  AR++F  + E   +S+N M+  Y+
Sbjct: 278 HGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYS 337

Query: 252 WNEQYKESLKLFRELQFTRFDRSQF-PFS-TLLSVVAN-------KLDLQIGRQIHTQTI 302
            + + +E L+LF  +     D ++  P S T+L+V++           + I   + +  I
Sbjct: 338 KHGEGREVLELFNLM----IDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKI 393

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
                S  K    +VDM  + GR E A E    +    S   W  ++ A     NL+
Sbjct: 394 SVQPDS--KHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLD 448



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           L S H  + +  +L    P       N+ I     + + +E+L     +     D +   
Sbjct: 8   LSSTHKAIFQKPRLLSTFPSNSHHVLNIHIH----DTRLREALL---HMALRGLDTNFQD 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           ++T+L+    K  ++ G+++H   I T  +  V +   L+  Y KC    +A+ +F  + 
Sbjct: 61  YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP 120

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + V WTAMISAY Q+G   +AL+LF++M R+    ++ TFA++L +    +   LG+Q
Sbjct: 121 ERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQ 180

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +HS +I+  + ++V+ GS+LLDMYAK G + +A   F+ +PER++VS  A+IS  AQ G 
Sbjct: 181 IHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGL 240

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  L+ F  + + G Q + V+  SVL+A S    ++ G Q  N +     LR +   Y 
Sbjct: 241 DEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHL-----LRSEVPSYV 295

Query: 518 ----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               S++D+  + G    A ++   +  E   I W++++
Sbjct: 296 VLQNSLIDMYSKCGNLTYARRIFDTL-HERTVISWNAML 333



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 10/188 (5%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N LI  Y K GNL  AR +F+++ +RT +SW  ++ GYS+  + RE  +LF  M  
Sbjct: 295 VVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMID 354

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADI----IKFGYNSILIICNSLVDSYCKI 121
           +    PD VT   +LSGCS     ++ + +  D+    I    +S    C  +VD   + 
Sbjct: 355 ENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGC--VVDMLGRA 412

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP---SDFTFA 178
             ++ A    K+MP + S +    + G      N + I  FV  Q L  +P    ++   
Sbjct: 413 GRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLD-IGEFVGHQLLQIEPENAGNYVIL 471

Query: 179 AALSAGVG 186
           + L A  G
Sbjct: 472 SNLYASAG 479


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/657 (35%), Positives = 388/657 (59%), Gaps = 5/657 (0%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            + N    + LI+ YVK G ++ A+++F+   ++  V W  ++ G+ Q +   E  ++F  
Sbjct: 359  DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQY 418

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR     + D  TF ++L  C   D+ +   QVH   IK   ++ L + N+++D Y K+ 
Sbjct: 419  MRR-ADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLG 477

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             +D+A+ +F  +P KDSVS+NALI G A     EEA+ +   M+  G  P + +FA A++
Sbjct: 478  AIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAIN 537

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A   +     G+Q+H   +K N   N  V ++L+DLYSK   V  +RK+   +     V 
Sbjct: 538  ACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVP 597

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             N +IT    N +  E+++LF+++    F  S F F+++LS     +   IG+Q+H+ T+
Sbjct: 598  INALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTL 657

Query: 303  VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEEA 360
             +  +++   +  SLV +Y KC   E+A ++ A +  H + V WTA IS Y Q G  +++
Sbjct: 658  KSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQS 717

Query: 361  LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            L +F  M   ++ +D+ATFAS+L+A +E+A+L+ GK++H  +I+SGF+S   + SAL+DM
Sbjct: 718  LVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDM 777

Query: 421  YAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            Y+K G +  + + FKE+  + NI+ WN++I   A+NG A   L  F+ M +S  +PD V+
Sbjct: 778  YSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVT 837

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            LL VL ACSH GLI EG   F+SM+Q Y + P+ +HYA ++D+L R G   EA++++ Q+
Sbjct: 838  LLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQL 897

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            PF  D ++W++ + +C++HK+ E  K AA +L +ME  R ++ YV +S+++A AG W   
Sbjct: 898  PFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQR-SSTYVFLSSLHAAAGNWVEA 956

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
               ++AMRE+GV K    SW+ + +K ++F   D  HP T  I + +++L   M K+
Sbjct: 957  KVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMMNKD 1013



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 270/543 (49%), Gaps = 36/543 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K   +  AR +F+ +     + W  +I GY +  ++++A  LF  M    GS P
Sbjct: 201 LVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEK-MGSAP 259

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VT+ T++S                                   +   +  L  AR + 
Sbjct: 260 DQVTYVTIIS-----------------------------------TLASMGRLSDARTLL 284

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K +    +V++NA+I+ +++ GL  E   L+ +M+  G  P+  TFA+ LSA   +    
Sbjct: 285 KRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFD 344

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q+HA  VK     NVFV ++L++LY KH C+ +A+K+F    E + V +N M+  + 
Sbjct: 345 EGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFV 404

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N+  +E++++F+ ++    +   F F ++L    N   L IGRQ+H  TI  +  +++ 
Sbjct: 405 QNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLF 464

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VAN+++DMY+K G  + AK +F+ +    +V W A+I         EEA+ +   M    
Sbjct: 465 VANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYG 524

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ D+ +FA+ + A + + +   GKQ+H   I+    SN   GS+L+D+Y+K G ++ + 
Sbjct: 525 IAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSR 584

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           +    +   ++V  NALI+   QN      ++ F+ +++ G++P + +  S+LS C+   
Sbjct: 585 KVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPV 644

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
               G Q  +   +   L        S+V I  +    ++A KL+A++P   + + W++ 
Sbjct: 645 SSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTAT 704

Query: 552 INS 554
           I+ 
Sbjct: 705 ISG 707



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 254/530 (47%), Gaps = 39/530 (7%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           +++    R+    F  +R   G  PD    A +LS CS      +  QVH D++K G+ S
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
                  LVD Y K   +  ARRVF  +   D++ + ++I G+ + G  ++A+ LF  M+
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            +G  P   T+   +S    LA  ++GR                              + 
Sbjct: 254 KMGSAPDQVTYVTIIST---LA--SMGR------------------------------LS 278

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           +AR L   +     V++N +I+ Y+ +    E   L+++++      ++  F+++LS  A
Sbjct: 279 DARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAA 338

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +      G+QIH   +     + V V +SL+++Y K G   +AK++F   +  + V W A
Sbjct: 339 SMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 398

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           M+  +VQ    EE + +F  M RA++ AD  TF S+L A   L SL +G+Q+H   I++ 
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
             +++F  +A+LDMY+K G++  A   F  +P ++ VSWNALI   A N + +  +   +
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLK 518

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M   G  PD VS  + ++ACS+    E G Q  +  + KY +       +S++D+  + 
Sbjct: 519 RMKCYGIAPDEVSFATAINACSNIRATETGKQ-IHCASIKYNVCSNHAVGSSLIDLYSKF 577

Query: 527 GCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           G  + + K++A +      P   + + ++ + R  + +E  ++     FK
Sbjct: 578 GDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFK 627



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 40/360 (11%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWN 253
           +HA V++        + +AL+DLY +   V  A +  G        G + + +++C+A +
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 254 EQYKESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              ++ L  F+ L+ +      QF  + +LS  +    L+ GRQ+H   + +   S    
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
              LVDMYAKC   ++A+ +F  ++   T+ W +MI+ Y + G  ++AL LF  M +   
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
           + DQ T+ +I+   + LAS+                                G L DA  
Sbjct: 258 APDQVTYVTII---STLASM--------------------------------GRLSDART 282

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
             K +   + V+WNA+IS+ +Q+G        ++DM + G  P   +  S+LSA +    
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            +EG Q  ++   K+ L       +S++++  + GC  +A+K+      E + +MW++++
Sbjct: 343 FDEG-QQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMWNAML 400


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/671 (34%), Positives = 388/671 (57%), Gaps = 71/671 (10%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSL 114
           A K F+ +  D  S  D   FA LL  C +   +   ++ VHA +IK G+++ + I N L
Sbjct: 2   ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61

Query: 115 VDSYCKIRCLDLARRVFKEMPQK-------------------------------DSVSFN 143
           +D+Y K   L+  R+VF +MPQ+                               D  ++N
Sbjct: 62  IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           ++++GFA+    EEA+  F  M   GF  ++++FA+ LSA  GL D+  G QVH+ + K+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            F+ +V++ +AL+D+YSK   V +A+++F EM + + VS+N +ITC+  N    E+L +F
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAK 322
           + +  +R +  +   ++++S  A+   +++G+++H + +    + +++ ++N+ VDMYAK
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301

Query: 323 CGRFEEAKEIF---------ANLSHIS----------------------TVPWTAMISAY 351
           C R +EA+ IF         A  S IS                       V W A+I+ Y
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--- 408
            Q G  EEAL+LF  + R ++     +FA+IL+A A+LA L LG Q H  V++ GF    
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421

Query: 409 ---SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
               ++F G++L+DMY K G +++    F++M ER+ VSWNA+I   AQNG     L+ F
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            +M++SG +PD ++++ VLSAC H G +EEG  YF+SMT+ + + P ++HY  MVD+L R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  +EA+ ++ +MP +PD ++W S++ +C++H+N+   K  A++L ++E   ++ PYV 
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP-SNSGPYVL 600

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+YA  G+WE V  V+K+MR+ GV K    SW++++   HVF   D+ HP+  +I   
Sbjct: 601 LSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSL 660

Query: 646 IENLMQEMKKE 656
           ++ L+ EM+ E
Sbjct: 661 LDILIAEMRPE 671



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 246/492 (50%), Gaps = 41/492 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  + N +++G  K G L  A  LF SM +R   +W  ++ G++Q ++  EA   F
Sbjct: 81  MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G    +Y +FA++LS CS  +  N+ +QVH+ I K  + S + I ++LVD Y K
Sbjct: 141 AMMHKEGFVLNEY-SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+RVF EM  ++ VS+N+LIT F + G   EA+ +F  M     +P + T A+ 
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMP--- 236
           +SA   L+ I +G++VH  VVK + + N + ++NA +D+Y+K   + EAR +F  MP   
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319

Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                       E + VS+N +I  Y  N + +E+L LF  L+ 
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F+ +L   A+  +L +G Q H   +       +    ++ V NSL+DMY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  EE   +F  +     V W AMI  + Q G   EAL LF EM  +    D  T   +
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV 499

Query: 383 LRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
           L A      +  G+   S + R  G        + ++D+  ++G L++A    +EMP + 
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559

Query: 441 NIVSWNALISAC 452
           + V W +L++AC
Sbjct: 560 DSVIWGSLLAAC 571


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/750 (34%), Positives = 393/750 (52%), Gaps = 72/750 (9%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V+ +  IS   + G +  AR+ F+S+  +   SW  ++ GY      REA ++F +M   
Sbjct: 18  VNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM--- 74

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
                              P+          +I+ +         N LV  Y K R ++ 
Sbjct: 75  -------------------PER---------NIVSW---------NGLVSGYIKNRMIEE 97

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV- 185
           AR VF+ MP+++ VS+ A++ G+ +EG+  EA  LF  M           F   +  G  
Sbjct: 98  ARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRI 157

Query: 186 ----GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
                L D+  G+ V   V  TN +  +           +   V EAR++F EM E + +
Sbjct: 158 DDARKLYDMMPGKDV---VASTNMIGGL----------CREGRVDEAREIFDEMRERNVI 204

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--T 299
           ++  MIT Y  N++   + KLF  +          P  T +S  +  L   +  +I    
Sbjct: 205 TWTTMITGYGQNKRVDVARKLFEVM----------PEKTEVSWTSMLLGYTLSGRIEDAE 254

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           +      +  V   N+++    + G   +A+ +F  +       W  MI AY +KG   E
Sbjct: 255 EFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELE 314

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL LF +M R  +     +  SIL   A LASL  G+Q+H+ ++R  F  +V+  S L+ 
Sbjct: 315 ALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMT 374

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY K G L  A   F   P ++I+ WN++IS  A +G  +  LK F +M  SG  P+ V+
Sbjct: 375 MYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVT 434

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
           L+++L+ACS+ G +EEGL+ F SM  K+ + P  EHY+  VD+L R+G  D+A +L+  M
Sbjct: 435 LIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSM 494

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             +PD  +W +++ +C+ H  L+ A+ AA +LF++E   +A PY+ +S+I A   +W  V
Sbjct: 495 TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEP-ENAGPYILLSSINASRSKWGDV 553

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGY 658
           ++++K MR + V K    SW+E+  KVH+FT      HP+   I   +E     +++ GY
Sbjct: 554 AEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGY 613

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            PD S  LHD DEE KV+SL  HSERLA+A+ L+  PEG PI VMKNLR C DCHAAIKL
Sbjct: 614 SPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKL 673

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           ISK+T REI +RD++RFHHF +G CSCRD+
Sbjct: 674 ISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 236/542 (43%), Gaps = 116/542 (21%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N VS N L+SGY+K+  +  AR +F  M +R  VSWT ++ GY Q+    EA  LF
Sbjct: 74  MPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLF 133

Query: 61  VDMR--------------TDGGSDPD---------------------------------- 72
             M                DGG   D                                  
Sbjct: 134 WRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEARE 193

Query: 73  ---------YVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSIL------------ 108
                     +T+ T+++G  +    D A +L +V  +  +  + S+L            
Sbjct: 194 IFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253

Query: 109 ------------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
                       I CN+++ +  ++  +  ARRVF +M  +D+ ++  +I  + ++G   
Sbjct: 254 EEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFEL 313

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
           EA++LF +MQ  G +PS  +  + LS    LA +  GRQVHA +V+  F  +V+VA+ L+
Sbjct: 314 EALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLM 373

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
            +Y K   +V+A+ +F   P  D + +N +I+ YA +   +E+LK+F E+  +    ++ 
Sbjct: 374 TMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKV 433

Query: 277 PFSTLLSVVA--NKLD--LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
               +L+  +   KL+  L+I   + ++  VT  +         VDM  + G+ ++A E+
Sbjct: 434 TLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCT---VDMLGRAGKVDKAMEL 490

Query: 333 FANLS-HISTVPWTAMISAYVQKGNLE------------EALNLFIEMCRANISADQATF 379
             +++       W A++ A      L+            E  N    +  ++I+A ++ +
Sbjct: 491 INSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKW 550

Query: 380 ASI--LRASAELASLS---------LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  +R +    ++S         +GK++H F  R G  ++      L+ +    G L+
Sbjct: 551 GDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFT-RGGIRNHPEQAMILMMLEKTDGLLR 609

Query: 429 DA 430
           +A
Sbjct: 610 EA 611



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 25/254 (9%)

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
           SL   LH     S  ++N F  S L    ++ G + +A + F  +  + I SWN+++S  
Sbjct: 3   SLKLILHRAYSTSTGVNNSFEISRL----SRIGQINEARKFFDSLRYKAIGSWNSIVSGY 58

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             NG  +   + F++M +     + VS   ++S      +IEE    F  M ++  +   
Sbjct: 59  FANGLPREARQMFDEMPER----NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV--- 111

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
              + +MV    + G   EAE L  +MP E +E+ W+ +         ++ A+K    L+
Sbjct: 112 --SWTAMVKGYVQEGMVVEAELLFWRMP-ERNEVSWTVMFGGLIDGGRIDDARK----LY 164

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV----RKVTAYSWVELKSKVHV 628
            M   +D      M       G+ +   ++   MRER V      +T Y       +V V
Sbjct: 165 DMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYG---QNKRVDV 221

Query: 629 FTANDELHPQTNEI 642
                E+ P+  E+
Sbjct: 222 ARKLFEVMPEKTEV 235


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 261/741 (35%), Positives = 407/741 (54%), Gaps = 16/741 (2%)

Query: 10   NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTDGG 68
            N LI  Y   G +  A ++F+ M  + A+SWT +I GY +KN F + A +++  M     
Sbjct: 337  NSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY-EKNGFPDKALEVYALMELHN- 394

Query: 69   SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             +PD VT A+ L+ C+     +  I++H      G+   +++ N+L++ Y K + +D A 
Sbjct: 395  VNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 129  RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGL 187
             VFK M +KD VS++++I GF     + +A+  F  M  LG  KP+  TF AALSA    
Sbjct: 455  EVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM--LGHVKPNSVTFIAALSACAAT 512

Query: 188  ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
              +  G+++HA+V++       +V NALLDLY K      A   F    E D VS+N+M+
Sbjct: 513  GALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIML 572

Query: 248  TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            + +  +     +L LF ++ +T   R     +        +LD  +G ++H        I
Sbjct: 573  SGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLD--VGIKLHELAQNKGFI 630

Query: 308  SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
              V VAN+L++MYAK    ++A E+F  ++    V W++MI+ +       +AL  F  M
Sbjct: 631  RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 690

Query: 368  CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               ++  +  TF + L A A   +L  GK++H++V+R G  S  +  +ALLD+Y K G  
Sbjct: 691  L-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 749

Query: 428  KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
              A   F    E+++VSWN ++S    +G     L  F  MV+ G  PD V+ + ++ AC
Sbjct: 750  SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCAC 808

Query: 488  SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            S  G++ +G + F+  T+K+ + P  +HYA MVD+L R G   EA  L+ +MP +PD  +
Sbjct: 809  SRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 868

Query: 548  WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            W +++N CRIH+++E  + AA  + ++E   D A +V + ++Y  AG+W  V++V+K MR
Sbjct: 869  WGALLNGCRIHRHVELGELAAKVILELEP-NDVAYHVLLCDLYTDAGKWAQVARVRKTMR 927

Query: 608  ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            E+G+ +    SWVE+K   H F  +DE HPQ  EI   +  + + MK  G+ P  S    
Sbjct: 928  EKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESL--- 984

Query: 668  DEDEEIKVES-LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
             ED+E+  +  L  HSERLA+AF LINT  G+ I V KN   C  CH   K IS+I  RE
Sbjct: 985  -EDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRRE 1043

Query: 727  ITVRDSSRFHHFKDGFCSCRD 747
            ITVRD+ + H FKDG CSC D
Sbjct: 1044 ITVRDTKQLHCFKDGDCSCGD 1064



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 228/462 (49%), Gaps = 2/462 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++S  V+ G +  A  +F  M +R   SW +++GGY +     EA  L+  M    G 
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW-AGM 193

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF  +L  C          +VHA +++FG+   + + N+LV  Y K   +  AR+
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARK 253

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF  M   D +S+NA+I G  +    E  ++LF+ M     +P+  T  +   A   L++
Sbjct: 254 VFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSE 313

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   +++H F VK  F  +V   N+L+ +Y+    + +A K+F  M   D +S+  MI+ 
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  N    ++L+++  ++    +      ++ L+  A    L +G ++H        I  
Sbjct: 374 YEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V VAN+L++MYAK    ++A E+F  ++    V W++MI+ +       +AL  F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML- 492

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            ++  +  TF + L A A   +L  GK++H++V+R G  S  +  +ALLD+Y K G    
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           A   F    E+++VSWN ++S    +G     L  F  M+ +
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYT 594



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 212/448 (47%), Gaps = 6/448 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V  N L+  Y KS ++  A E+F  M ++  VSW+ +I G+   ++  +A   F  M  
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML- 492

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            G   P+ VTF   LS C+         ++HA +++ G  S   + N+L+D Y K     
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A   F    +KD VS+N +++GF   GL + A+ LF +M +          A A  A +
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACL 611

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           G  D+  G ++H       F+  V VANALL++Y+K   + +A ++F  M E D VS++ 
Sbjct: 612 GRLDV--GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 669

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  + +N +  ++L  FR +       +   F   LS  A    L+ G++IH   +   
Sbjct: 670 MIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCG 728

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             SE  V N+L+D+Y KCG+   A   F+  S    V W  M+S +V  G  + AL+LF 
Sbjct: 729 IGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFN 788

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M       D+ TF  +   S     +   +  H    +   + N+   + ++D+ ++ G
Sbjct: 789 QMVEMGEHPDEVTFVLMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVG 848

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L +A      MP + +   W AL++ C
Sbjct: 849 KLTEAYNLINRMPIKPDAAVWGALLNGC 876



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 3/353 (0%)

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           + NA+L +  +   +  A ++F +MPE D  S+NVM+  Y      +E+L L+  + +  
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                + F  +L       D ++GR++H   +      EV V N+LV MYAKCG    A+
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  ++    + W AMI+ + +    E  L LF+ M    +  +  T  S+  AS  L+
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            +   K++H F ++ GF  +V   ++L+ MY   G + DA + F  M  ++ +SW A+IS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
              +NG     L+ +  M      PD V++ S L+AC+  G ++ G++       K  +R
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHKNLE 562
                 A ++++  +S   D+A ++   M  E D + WSS+I   C  H++ +
Sbjct: 433 YVVVANA-LLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFD 483



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 12/276 (4%)

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +++ N+++ M  + G    A  +FA +       W  M+  Y + G LEEAL+L+  M  
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +  D  TF  +LR    +    +G+++H+ V+R GF   V   +AL+ MYAK G +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA--- 486
           A + F  M   + +SWNA+I+   +N + +A L+ F  M+++  QP+ +++ SV  A   
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
            S  G  +E     +    K           S++ +    G   +A K+ ++M  + D +
Sbjct: 311 LSEVGFAKE----MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK-DAM 365

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            W+++I+    ++   F  KA  +++ + +L +  P
Sbjct: 366 SWTAMISG---YEKNGFPDKAL-EVYALMELHNVNP 397


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/544 (39%), Positives = 332/544 (61%), Gaps = 1/544 (0%)

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
           + N+   N L++ + +H  +  A K+F EM E +  ++N M++     E  +  L LFRE
Sbjct: 20  MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +    F   +F   ++L   A       G+Q+H   +       + V +SL  MY K G 
Sbjct: 80  MHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGS 139

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
             E +++   +   + V W  +I+   Q G+ E  L+L+  M  + +  D+ T  S++ +
Sbjct: 140 LGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISS 199

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           SAELA+L  G+Q+H+  I++G  S V   S+L+ MY+K G L+D+++   +    + V W
Sbjct: 200 SAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           +++I+A   +G  +  +  FE M Q G   + V+ LS+L ACSH GL E+G+ +F  M +
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319

Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           KY L+P+ EHY  +VD+L RSGC DEAE ++  MP E D ++W +++++CRIH+N + A 
Sbjct: 320 KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMAT 379

Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           + A+++ ++   +D+A YV +SNI+A A +W+ VS+V+  MR+R V+K    SW+E+K++
Sbjct: 380 RTAEEILRLNP-QDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNR 438

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           V  F+  D+ HP + EI   ++ LM+EMK  GY PDT+   HD D E K  SL  HSE+L
Sbjct: 439 VFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKL 498

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIAF L+N P GSPI VMKNLR C+DCH AIKLIS I  REI VRD+SRFHHFK G CSC
Sbjct: 499 AIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSC 558

Query: 746 RDFW 749
            D+W
Sbjct: 559 GDYW 562



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 194/372 (52%), Gaps = 2/372 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N L++ + +   LD A +VF EM +++  ++NA+++G  +   NE  + LF EM  LGF 
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P +FT  + L    GL     G+QVHA+V+K  +  N+ V ++L  +Y K   + E  K+
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
              M   + V++N +I   A N  ++  L L+  ++ +     +    +++S  A    L
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G+QIH + I   A S V V +SL+ MY+KCG  E++ +   +  H  +V W++MI+AY
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI-RSGFMSN 410
              G  EEA++LF +M +  +  +  TF S+L A +       G      ++ + G    
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPR 326

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +   + ++D+  +SG L +A    + MP E ++V W  L+SAC  + +A    ++ E+++
Sbjct: 327 LEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEIL 386

Query: 470 QSGYQPDSVSLL 481
           +   Q  +  +L
Sbjct: 387 RLNPQDSATYVL 398



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 228/499 (45%), Gaps = 55/499 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N +S N+LI+G+V+ G+L +A ++F+ M++R   +W  ++ G  Q         LF
Sbjct: 18  MPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLF 77

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M  + G  PD  T  ++L GC+    +    QVHA ++K+GY   L++ +SL   Y K
Sbjct: 78  REMH-ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMK 136

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L    +V K M  ++ V++N LI G A+ G  E  + L+  M+  G +P   T  + 
Sbjct: 137 SGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSV 196

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +S+   LA +  G+Q+HA  +K      V V ++L+ +YSK  C+ ++ K   +    D 
Sbjct: 197 ISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDS 256

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V ++ MI  Y ++ + +E++ LF +++      +   F +LL   ++    + G      
Sbjct: 257 VLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKL 316

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            +    +   ++    +VD+  + G  +EA+ +  ++      V W  ++SA        
Sbjct: 317 MVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA-------- 368

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
                    CR + +AD AT     R + E+  L L  Q  +  +    +SN+       
Sbjct: 369 ---------CRIHRNADMAT-----RTAEEI--LRLNPQDSATYV---LLSNI------- 402

Query: 419 DMYAKSGSLKDAIQTFKEMPERNI-----VSWNALISACAQ--NGDAQATLKS------- 464
             +A +   KD  +    M +RN+     VSW  + +   Q   GD    +         
Sbjct: 403 --HASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLK 460

Query: 465 --FEDMVQSGYQPDSVSLL 481
              E+M   GY PD+ ++ 
Sbjct: 461 ELMEEMKLRGYVPDTATVF 479



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 33/284 (11%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA---- 374
           MY K G  +EA   F  +   + +    +I+ +VQ G+L+ A+ +F EM   N++     
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 375 ---------------------------DQATFASILRASAELASLSLGKQLHSFVIRSGF 407
                                      D+ T  S+LR  A L +   GKQ+H++V++ G+
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
             N+  GS+L  MY KSGSL +  +  K M  RN+V+WN LI+  AQNG  +  L  +  
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M  SG +PD ++L+SV+S+ +    + +G Q  ++   K          +S++ +  + G
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQG-QQIHAEAIKAGANSAVAVLSSLISMYSKCG 239

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           C +++ K +      PD ++WSS+I +   H   E A    +Q+
Sbjct: 240 CLEDSMKALLDCE-HPDSVLWSSMIAAYGFHGRGEEAVHLFEQM 282


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/666 (34%), Positives = 378/666 (56%), Gaps = 2/666 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+ + L+  Y K   L  + + F+SM ++  VSW+ +I G  Q +  R   +LF +M+
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G      TFA++   C+         Q+H   +K  + + ++I  + +D Y K   L
Sbjct: 268 K-AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+++F  +P  +  S+NA+I G+A+     EA+ +F  +Q  G    + + + A  A 
Sbjct: 327 SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRAC 386

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +     G QVH   +K+    N+ VANA+LD+Y K   +VEA  +F EM   D VS+N
Sbjct: 387 AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWN 446

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  +  N   +++L LF  +  +  +  +F + ++L   A    L  G +IH + I +
Sbjct: 447 AIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS 506

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +  V  +L+DMY+KCG  E+A+++   L+  + V W A+IS +  +   EEA   F
Sbjct: 507 RLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 566

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    +  D  T+A+IL   A L ++ LGKQ+H+ +I+    S+ +  S L+DMY+K 
Sbjct: 567 SKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKC 626

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+++D    F++ P R+ V+WNA++   AQ+G  +  LK FE M     +P+  + L+VL
Sbjct: 627 GNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 686

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            AC H GL+E+GL YF+SM   Y L P+ EHY+ +VDI+ RSG   +A +L+  MPFE D
Sbjct: 687 RACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEAD 746

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W ++++ C+IH N+E A+KAA  + ++E   D+A YV +SNIYA AG W  V++++K
Sbjct: 747 AVIWRTLLSICKIHGNVEVAEKAAYSILQLEP-EDSAAYVLLSNIYANAGMWNEVTKLRK 805

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            MR  G++K    SW+E+KS+VH F   D+ HP++ EI   ++ L  EMK  GY PDT  
Sbjct: 806 MMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDF 865

Query: 665 ALHDED 670
            L+D++
Sbjct: 866 ILNDDE 871



 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/583 (31%), Positives = 320/583 (54%), Gaps = 9/583 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++TVS N ++ GY   G++  A++LF++M +R  VSW  LI GY      R+   +F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M    G+  D  TFA +L  CS  +     IQ+H   +K G++  ++  ++L+D Y K
Sbjct: 163 LQMGR-MGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD + + F  MP+K+ VS++A+I G  +       ++LF EMQ  G   S  TFA+ 
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +  GL+ + LG Q+H   +KT+F  +V +  A LD+Y K + + +A+KLF  +P  + 
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHT 299
            SYN +I  YA +++  E+L +FR LQ +     +   S      A  K DL+ G Q+H 
Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHG 400

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            ++ +   S + VAN+++DMY KCG   EA  +F  +     V W A+I+A+ Q GN E+
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            L+LF+ M ++ +  D+ T+ S+L+A A   +L+ G ++H+ +I+S    + F G AL+D
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALID 520

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+K G ++ A +    + E+ +VSWNA+IS  +    ++   K+F  M++ G  PD+ +
Sbjct: 521 MYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 580

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             ++L  C++   +E G Q    + +K +L+      +++VD+  + G   + + +  + 
Sbjct: 581 YATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 639

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           P   D + W++++     H   E A K    +F+  +L +  P
Sbjct: 640 P-NRDFVTWNAMVCGYAQHGLGEEALK----IFEYMQLENVKP 677



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 267/534 (50%), Gaps = 39/534 (7%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ +   CS+        Q HA +I   +   + + N L+  Y K   L+ A +VF  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 135 PQKDSVSFNA-------------------------------LITGFAKEGLNEEAIKLFV 163
           PQ+D+VS+NA                               LI+G+   G + + I +F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS--- 220
           +M  +G      TFA  L +   L D   G Q+H   VK  F  +V   +ALLD+Y+   
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K DC ++    F  MPE + VS++ +I     N+  +  L+LF+E+Q      SQ  F++
Sbjct: 224 KLDCSIQ---FFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +    A    L++G Q+H   + T   ++V +  + +DMY KC    +A+++F +L + +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
              + A+I  Y +     EAL +F  + ++ +  D+ + +   RA A +     G Q+H 
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             ++S   SN+   +A+LDMY K G+L +A   F+EM  R+ VSWNA+I+A  QNG+ + 
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
           TL  F  M+QSG +PD  +  SVL AC+    +  G++  N +  K +L        +++
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRII-KSRLGLDSFVGIALI 519

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           D+  + G  ++AEKL  ++  E   + W+++I+   + K  E A+K   ++ +M
Sbjct: 520 DMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 241/536 (44%), Gaps = 86/536 (16%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSK----------------HDCVVE--------- 227
           G+Q HA ++ T F   VFV N L+ +Y K                 D V           
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAG 120

Query: 228 ------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFS 279
                 A+KLF  MPE D VS+N +I+ Y  N  +++ + +F ++    T FDR+   F+
Sbjct: 121 RGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT--TFA 178

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
            +L   ++  D   G QIH   +      +V   ++L+DMYAKC + + + + F ++   
Sbjct: 179 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK 238

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
           + V W+A+I+  VQ  +L   L LF EM +A +   Q+TFAS+ R+ A L++L LG QLH
Sbjct: 239 NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLH 298

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
              +++ F ++V  G+A LDMY K  +L DA + F  +P  N+ S+NA+I   A++    
Sbjct: 299 GHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGI 358

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             L  F  + +SG   D VSL     AC+      EGLQ  + ++ K   +       ++
Sbjct: 359 EALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAI 417

Query: 520 VDILCRSGCFDEA----------------------------EK------LMAQMPFEPDE 545
           +D+  + G   EA                            EK       M Q   EPDE
Sbjct: 418 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDE 477

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
             + SV+ +C   + L    +  +++ K     D+   +A+ ++Y+  G  E   ++   
Sbjct: 478 FTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDR 537

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           + E+     T  SW       +   +   L  Q+ E ++    ++ EM   G  PD
Sbjct: 538 LAEQ-----TVVSW-------NAIISGFSLQKQSEEAQKTFSKML-EM---GVDPD 577



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 39/248 (15%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + TF+ I +  ++  +L  GKQ H+ +I + F   VF  + L+ MY K   L+ A + F 
Sbjct: 42  KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101

Query: 436 EMPERNIVSWNA-------------------------------LISACAQNGDAQATLKS 464
            MP+R+ VSWNA                               LIS    NGD +  +  
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F  M + G   D  +   VL +CS       G+Q  + +  K          ++++D+  
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ-IHGLAVKMGFDCDVVTGSALLDMYA 220

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           +    D + +    MP E + + WS++I  C  + +L    +   +LFK  +++ A   V
Sbjct: 221 KCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDL----RGGLELFK--EMQKAGVGV 273

Query: 585 AMSNIYAV 592
           + S   +V
Sbjct: 274 SQSTFASV 281


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/573 (38%), Positives = 343/573 (59%), Gaps = 2/573 (0%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + AA++A V    +  GRQVHA +VK  +   V++A  L+ LY +   + +AR +   MP
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E + VS+  MI+ Y+ + ++ E+L+LF  +       ++F  +T+L+       +Q   Q
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H+  + T   S + V +SL+DMY K G  +EA+++F  L    TV  TA+IS Y Q G 
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            +EAL+LF ++  + +  +  TF ++L + + LASL+ GKQ+H  ++R      +   ++
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY+K G L  + + F  MP+R+ +SWNA++    ++G  Q  ++ F  M +   +PD
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPD 342

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
           SV+LL+VLS CSH GL++EGL  F+ + ++        HY  ++D+L RSG   +A  L+
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MPFEP   +W S++ +CR+H N+   +  A +L  ME   +A  YV +SNIYA AG W
Sbjct: 403 EHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEP-GNAGNYVILSNIYAAAGMW 461

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +V+K M E  V K  A SW+ L   +H F +++  HP+  +I  KI+ +  ++K  
Sbjct: 462 KDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAA 521

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           G+ PD SC LHD D+E K   L  HSE+LAI F L+NTP G  I VMKNLR C DCH   
Sbjct: 522 GFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFA 581

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K +SK+ GREI++RD +RFH  KDG C+C D+W
Sbjct: 582 KFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 203/387 (52%), Gaps = 3/387 (0%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+D  +  +   ++ C E     E  QVHA ++K  Y   + +   L+  Y +   LD A
Sbjct: 36  GADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDA 95

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R V   MP+++ VS+ A+I+G+++ G + EA++LF+ M   G K ++FT A  L++    
Sbjct: 96  RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             I    QVH+ VVKTNF  ++FV ++LLD+Y K   + EARK+F  +PE D VS   +I
Sbjct: 156 QSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAII 215

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA      E+L LFR+L  +    +   F+TLL+ ++    L  G+Q+H   +     
Sbjct: 216 SGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELP 275

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + + NSL+DMY+KCG+   ++ +F N+   S + W AM+  Y + G  +E + LF  M
Sbjct: 276 FFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM 335

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGS 426
               +  D  T  ++L   +    +  G  +   +++    + ++     ++D+  +SG 
Sbjct: 336 TE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQ 394

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISAC 452
           L+ A+   + MP E     W +L+ AC
Sbjct: 395 LQKALDLIEHMPFEPTPAIWGSLLGAC 421



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 189/352 (53%), Gaps = 26/352 (7%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  YV+ G L  AR + + M +R  VSWT +I GYSQ  +  EA +LF+ M    G   
Sbjct: 82  LIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRM-LRAGCKA 140

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T AT+L+ C    +  ++ QVH+ ++K  + S + + +SL+D Y K   +  AR+VF
Sbjct: 141 NEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVF 200

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +P++D+VS  A+I+G+A+ GL++EA+ LF ++   G + +  TF   L++  GLA + 
Sbjct: 201 DMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLN 260

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+QVH  +++      + + N+L+D+YSK   ++ +R++F  MP+   +S+N M+  Y 
Sbjct: 261 YGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYG 320

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA------------NKLDLQIGRQIHT 299
            +   +E ++LFR    T  +  +    TLL+V++            +  DL +  Q   
Sbjct: 321 RHGIGQEVVQLFR----TMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ--- 373

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
                 A+  +     ++D+  + G+ ++A ++  ++    T   W +++ A
Sbjct: 374 -----NAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGA 420



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V  N LI  Y K G L  +R +F++M  R+A+SW  ++ GY +    +E  +LF  M  +
Sbjct: 279 VLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE 338

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK 101
               PD VT   +LSGCS     +E + +   I+K
Sbjct: 339 --VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK 371


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/646 (34%), Positives = 369/646 (57%), Gaps = 4/646 (0%)

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
           NS   I N ++  YC  +    A R F ++  +D  S++ +I+ + +EG  +EA++LF+ 
Sbjct: 123 NSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLR 182

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M  LG  P+   F+  + +    + + LG+Q+H+ +++  F  N+ +   + ++Y K   
Sbjct: 183 MLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGW 242

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           +  A     +M   + V+   ++  Y    + +++L LF ++     +   F FS +L  
Sbjct: 243 LDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A   DL  G+QIH+  I     SEV V   LVD Y KC RFE A++ F ++   +   W
Sbjct: 303 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 362

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           +A+I+ Y Q G  + AL +F  +    +  +   + +I +A + ++ L  G Q+H+  I+
Sbjct: 363 SALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIK 422

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G ++ +   SA++ MY+K G +  A Q F  + + + V+W A+I A A +G A   L+ 
Sbjct: 423 KGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRL 482

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F++M  SG +P++V+ + +L+ACSH GL++EG +  +SM+ +Y + P  +HY  M+D+  
Sbjct: 483 FKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYS 542

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G   EA +++  +PFEPD + W S++  C  H+NLE    AAD +F+++ L D+A YV
Sbjct: 543 RAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPL-DSATYV 601

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            M N+YA+AG+W+  +Q +K M ER +RK  + SW+ +K KVH F   D  HPQT +I  
Sbjct: 602 IMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYS 661

Query: 645 KIENLMQEMKKEGYK-PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
           K++ L    KK   +  +   AL D  E  + E L  HSERLAIA+ LI T   +PI+V 
Sbjct: 662 KLKELNFSFKKSKERLLNEENALCDFTE--RKEQLLDHSERLAIAYGLICTAADTPIMVF 719

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KN R+C DCH   K +S +TGRE+ VRD +RFHH   G CSCRD+W
Sbjct: 720 KNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 256/509 (50%), Gaps = 6/509 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N N    N ++  Y    +  +A   F+ +VD+   SW+ +I  Y+++ +  EA +LF
Sbjct: 121 MANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLF 180

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M  D G  P+   F+TL+   ++P   +   Q+H+ +I+ G+ + + I   + + Y K
Sbjct: 181 LRM-LDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVK 239

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD A     +M +K++V+   L+ G+ K   N +A+ LF +M   G +   F F+  
Sbjct: 240 CGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSII 299

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   L D+  G+Q+H++ +K      V V   L+D Y K      AR+ F  + E + 
Sbjct: 300 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND 359

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S++ +I  Y  + Q+  +L++F+ ++      + F ++ +    +   DL  G QIH  
Sbjct: 360 FSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHAD 419

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I    ++ +   ++++ MY+KCG+ + A + F  +    TV WTA+I A+   G   EA
Sbjct: 420 AIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEA 479

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLD 419
           L LF EM  + +  +  TF  +L A +    +  GK+ L S     G    +   + ++D
Sbjct: 480 LRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMID 539

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP-DS 477
           +Y+++G L++A++  + +P E +++SW +L+  C  + + +  + + +++ +    P DS
Sbjct: 540 VYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFR--LDPLDS 597

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
            + + + +  +  G  +E  Q+   M ++
Sbjct: 598 ATYVIMFNLYALAGKWDEAAQFRKMMAER 626


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/532 (39%), Positives = 329/532 (61%), Gaps = 2/532 (0%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y K   V +AR +F +MP  D VS+  +I  YA N    E++ L  ++   RF  + F 
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F++LL          IG Q+H   +      +V V ++L+DMYA+C + + A  +F  L 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + V W A+I+ + +K + E  L  F EM R    A   T++S+  A A + +L  G+ 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H+ +I+SG     F G+ +L MYAKSGS+ DA + F  M +R++V+WN +++A AQ G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +  +  FE++ + G Q + ++ LSVL+ACSH GL++EG  YF+ M + Y ++P+ +HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYV 299

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
           S VD+L R+G   EA   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++  
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP- 358

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D  P V + NIYA  G+W   ++V+K M+  GV+K  A SWV++++ VH+F A+D+ HP
Sbjct: 359 DDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHP 418

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
           ++ +I R  E +   +KK GY P+T+  L   +E+ +   LKYHSE++A+AFALIN P G
Sbjct: 419 KSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAG 478

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + I +MKN+R C DCH+A K +SK+  REI VRD++RFHHF +G CSC D+W
Sbjct: 479 ASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 1/343 (0%)

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           YCK   +  AR VF +MP +D VS+  LI G+A+  +  EAI L  +M    F+P+ FTF
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + L A       ++G Q+HA  VK N+ E+V+V +ALLD+Y++ + +  A  +F  +  
Sbjct: 62  TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            + VS+N +I  +A     + +L  F E+Q   F  + F +S++ S  A    L+ GR +
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 181

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   I +       V N+++ MYAK G   +A+++F  +     V W  M++A  Q G  
Sbjct: 182 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLG 241

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           +EA+  F E+ +  I  +Q TF S+L A +    +  GK     +        +    + 
Sbjct: 242 KEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSF 301

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +D+  ++G LK+A+    +MP E     W AL+ AC  + +A+
Sbjct: 302 VDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 344



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 169/336 (50%), Gaps = 2/336 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G ++ AR +F+ M  R  VSWT LI GY+Q     EA  L  DM       P+  T
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDM-LRARFRPNGFT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F +LL         +   Q+HA  +K+ ++  + + ++L+D Y +   +D+A  VF  + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            K+ VS+NALI GFA++   E  +  F EMQ  GF  + FT+++  SA   +  +  GR 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VHA ++K+      FV N +L +Y+K   +V+ARK+F  M + D V++N M+T  A    
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            KE++  F E++      +Q  F ++L+  ++   ++ G+             E+    S
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 316 LVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
            VD+  + G  +EA   +F      +   W A++ A
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336



 Score = 45.8 bits (107), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y KSG++  AR++F+ M  R  V+W  ++   +Q    +EA   F ++R   G 
Sbjct: 198 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRK-CGI 256

Query: 70  DPDYVTFATLLSGCSEPDTANE 91
             + +TF ++L+ CS      E
Sbjct: 257 QLNQITFLSVLTACSHGGLVKE 278


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 373/703 (53%), Gaps = 49/703 (6%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE-G 153
           +H    K G   IL   N L+  Y K   LD A ++F E+  K++ ++  LI+GFA+  G
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
            +E    LF EMQ  G  P+ +T ++ L       +I  G+ +HA++++     +V + N
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR--------- 264
           ++LDLY K      A   F  M E D VS+N+MI  Y      ++SL++FR         
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 265 ---------ELQFTRFDRSQF-------------PFSTLLSVVANKLDLQIGRQIHTQTI 302
                    +  + R    Q               FS  L +V++   +++GRQ+H + +
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS----------------HISTVPWTA 346
                S+  + +SLV+MY KCGR ++A  I  ++                     V W++
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSS 353

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           M+S YV  G  E+ +  F  M    I  D  T A+I+ A A    L  GKQ+H+++ + G
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              + + GS+L+DMY+KSGSL DA+  F+++ E N+V W ++IS CA +G  +  +  FE
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M+  G  P+ V+ + VL+ACSH GLIEEG +YF  M   Y + P+ EHY SMV++  R+
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G   EA+  + +        +W S ++SCR+HKN    K  ++ L +     D   Y+ +
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAP-SDPDAYILL 592

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           SN+ +   QW+  + V+  M +RGV+K    SWV+LK ++H FT  D  HPQ  EI   +
Sbjct: 593 SNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYL 652

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           ++L+  +K+ GY  D    + D +EE     + +HSE+LA+ F++INT   +PI +MKNL
Sbjct: 653 DSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNL 712

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH   K  S++  REI VRD+ RFHHFK   CSC ++W
Sbjct: 713 RICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 258/534 (48%), Gaps = 54/534 (10%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFRE-AFKLFVDMRTD 66
           S N L++ YVKS NL  A +LF+ +  +   +WTILI G+++     E  F LF +M+ D
Sbjct: 69  SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   P+  T +++L  CS  +       +HA I++ G    +++ NS++D Y K +  + 
Sbjct: 129 GAC-PNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEY 187

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF------------------------ 162
           A   F+ M +KD VS+N +I  + +EG  E+++++F                        
Sbjct: 188 AESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYE 247

Query: 163 -VEMQHL------GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
            + ++ L      G + S  TF+ AL     L+ + +GRQ+H  V+      + ++ ++L
Sbjct: 248 RLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSL 307

Query: 216 LDLYSKHDCVVEARKLFGEM----------------PEVDGVSYNVMITCYAWNEQYKES 259
           +++Y K   + +A  +  ++                P+   VS++ M++ Y WN +Y++ 
Sbjct: 308 VEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDG 367

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           +K FR +            +T++S  AN   L+ G+QIH          +  V +SL+DM
Sbjct: 368 MKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDM 427

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+K G  ++A  IF  +   + V WT+MIS     G  +EA++LF  M    I  ++ TF
Sbjct: 428 YSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTF 487

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSALLDMYAKSGSLKDAIQTFKEM 437
             +L A + +  +  G +    +++  +  N  V   ++++++Y ++G L +A     E 
Sbjct: 488 VGVLNACSHVGLIEEGCRYFR-MMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFEN 546

Query: 438 PERNIVS-WNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSH 489
              +  S W + +S+C  + +        E ++QS    PD+  LLS + + +H
Sbjct: 547 SISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNH 600



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 201/445 (45%), Gaps = 44/445 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS N++I  Y++ G++  + E+F +  ++  VSW  +I G  Q    R A +  
Sbjct: 195 MIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQL 254

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    G++   VTF+  L   S         Q+H  ++ FG NS   I +SLV+ Y K
Sbjct: 255 YCMVAH-GTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGK 313

Query: 121 IRCLDLARRVFKEM----------------PQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
              +D A  + K++                P+   VS++++++G+   G  E+ +K F  
Sbjct: 314 CGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRS 373

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M          T A  +SA      +  G+Q+HA++ K     + +V ++L+D+YSK   
Sbjct: 374 MVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGS 433

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A  +F ++ E + V +  MI+  A + Q KE++ LF  +       ++  F  +L+ 
Sbjct: 434 LDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNA 493

Query: 285 VANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKE-IFAN-LSHIST 341
            ++   ++ G +       T  I+ EV+   S+V++Y + G   EAK  IF N +SH ++
Sbjct: 494 CSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTS 553

Query: 342 VPWTAMISAYVQKGNLE-----------------EALNLFIEMCRANISADQATFASIL- 383
           V W + +S+     N                   +A  L   MC +N   D+A     L 
Sbjct: 554 V-WRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLM 612

Query: 384 -----RASAELASLSLGKQLHSFVI 403
                +     + + L  Q+HSF +
Sbjct: 613 YQRGVKKQPGQSWVQLKDQIHSFTV 637



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 182/417 (43%), Gaps = 53/417 (12%)

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           S+  F  + F    RS+ P S L S  +      + R +H       ++  +  AN L+ 
Sbjct: 17  SVTNFHIVNFPFHSRSRQPCSFLHSTTSIGSPPSL-RALHGHYFKKGSLQILNSANYLLT 75

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-KGNLEEALNLFIEMCRANISADQA 377
           +Y K    + A ++F  ++H +T  WT +IS + +  G+ E   +LF EM       +Q 
Sbjct: 76  LYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQY 135

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T +S+L+  +   ++  GK +H++++R+G   +V   +++LD+Y K    + A   F+ M
Sbjct: 136 TLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELM 195

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFED---------------MVQSGYQPDSVSLLS 482
            E+++VSWN +I A  + GD + +L+ F +               ++Q GY+  ++  L 
Sbjct: 196 IEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLY 255

Query: 483 VLSA----------------CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            + A                 S   L+E G Q  +     + L       +S+V++  + 
Sbjct: 256 CMVAHGTEFSPVTFSIALILVSSLSLVEVGRQ-LHGRVLTFGLNSDGYIRSSLVEMYGKC 314

Query: 527 GCFDEAEKLMAQMPF-------------EPDEIM--WSSVINSCRIHKNLEFAKKAADQL 571
           G  D+A  ++  +P              EP   M  WSS+++    +   E   K    +
Sbjct: 315 GRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSM 374

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY---SWVELKSK 625
                + D      + +  A AG  E   Q+   +++ G+R + AY   S +++ SK
Sbjct: 375 VCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLR-IDAYVGSSLIDMYSK 430


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/683 (36%), Positives = 376/683 (55%), Gaps = 37/683 (5%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D D      ++  C+      E  ++H  + + G  S + + N LV  Y K   L+ AR 
Sbjct: 31  DADLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARL 90

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLA 188
           VF+  P K+  S+  LIT  A+ G ++EA+ LF EM   G +P   +F AA++A   G  
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +HA + +  F + V    +L+ +YSK   + E+ + F  M E + VS+N MI 
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIA 210

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A   +++  L+  R LQ                    K+ L+  R          A S
Sbjct: 211 AFA---EHRRGLEALRTLQ--------------------KMFLEGIR----------ACS 237

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  +LV+MYAKC    +A   F  L   + + W  +ISAYVQ    +EA+ LF  M 
Sbjct: 238 DVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRML 297

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSL 427
              +  D+ TF +IL A     +L  G+ +H+ V      SN     + +L+MY K GSL
Sbjct: 298 LLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSL 357

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA- 486
           +DA   FK M + ++++WN +I+A  Q+G     L+ +E M + G  PD  + +SV+ A 
Sbjct: 358 QDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDAS 417

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C++ GL EE   YF SM Q + +RP   HY  MV+ L ++G   +AE L+  MPFEPD +
Sbjct: 418 CANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVL 477

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            W+S + +CR H +++  K AA    +++    +  YVA++ I+A AG ++  S+++K M
Sbjct: 478 TWTSFLANCRSHGDMKRGKLAAKGAIRIDP-EASTGYVALARIHADAGDFQEASRIRKLM 536

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
            +RG+RK    S ++L + V+ FTA D+ +P++ EI  +++ L +EMK  GY PD +   
Sbjct: 537 LDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVA 596

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD +   K   L  HSERLAIAF +I+T  G+P+ +MKNLR C DCH   KL SKIT RE
Sbjct: 597 HDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRRE 656

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRDS+RFHHFK+G CSC+DFW
Sbjct: 657 IIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 216/456 (47%), Gaps = 43/456 (9%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y K G+L  AR +F +   +   SWTILI   +Q  + +EA  LF +M    G
Sbjct: 72  SNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQ-G 130

Query: 69  SDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             P  V+F   ++ CS  P+       +HA + ++G+   ++   SLV  Y K   L+ +
Sbjct: 131 IQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEES 190

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            R F+ M + ++VS+NA+I  FA+     EA++   +M                      
Sbjct: 191 MRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKM---------------------- 228

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                      F+       +V V   L+++Y+K   + +A   F ++ E + +++NV+I
Sbjct: 229 -----------FLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLI 277

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV-TTA 306
           + Y  +  +KE+++LFR +     +  +  F  +L      + L+ GR IH        A
Sbjct: 278 SAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLA 337

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            +   + N +++MY KCG  ++A+ +F ++S    + W  MI+AY Q G+  EAL  +  
Sbjct: 338 SNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYEL 397

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA----LLDMYA 422
           M    +  D  T+ S++ AS   A+  L ++ H++ +       V  G      +++   
Sbjct: 398 MQEEGVVPDDYTYVSVIDASC--ANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLG 455

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           K+G L DA    + MP E ++++W + ++ C  +GD
Sbjct: 456 KAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGD 491



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 128/250 (51%), Gaps = 9/250 (3%)

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           + ++S   Q G +  A    I+  +    AD      ++++ A L +L+ G+++H  + R
Sbjct: 7   STLLSKRQQLGQIAAA----IDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRR 62

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G  S+V+  + L+ MY K GSL++A   F+  P +N+ SW  LI+ CAQ+G +Q  L  
Sbjct: 63  VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M++ G QP SVS  + ++ACS         +  +++ ++Y  +       S+V +  
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR---DAA 581
           + G  +E+ +    M  EP+ + W+++I +   H+    A +   ++F +E +R   D  
Sbjct: 183 KCGSLEESMRTFESMT-EPNAVSWNAMIAAFAEHRRGLEALRTLQKMF-LEGIRACSDVV 240

Query: 582 PYVAMSNIYA 591
               + N+YA
Sbjct: 241 VGTTLVNMYA 250



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/361 (20%), Positives = 152/361 (42%), Gaps = 42/361 (11%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            V+T  L+S Y K G+L  +   F SM +  AVSW  +I  +++  +  EA +    M  
Sbjct: 171 VVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFL 230

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           +G            +  CS+                      +++  +LV+ Y K   L 
Sbjct: 231 EG------------IRACSD----------------------VVVGTTLVNMYAKCSGLH 256

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A   F ++ + + +++N LI+ + +    +EA++LF  M  LG +  + TF   L A  
Sbjct: 257 DANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACC 316

Query: 186 GLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               +  GR +HA V +     N   + N +L++Y K   + +A  +F  M + D +++N
Sbjct: 317 VPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWN 376

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  Y  +    E+L+ +  +Q        + + +++   A+  +  +  + H   +  
Sbjct: 377 TMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVID--ASCANAGLPEEAHAYFVSM 434

Query: 305 TAISEVKVANS----LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
                V+        +V+   K GR  +A+ +   +      + WT+ ++     G+++ 
Sbjct: 435 QQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKR 494

Query: 360 A 360
            
Sbjct: 495 G 495


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/627 (37%), Positives = 369/627 (58%), Gaps = 10/627 (1%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + + + D  S+N++I   A+ G + EA+  F  M+ L   P+  +F  A+ A   L DI 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q H       +  ++FV++AL+ +YS    + +ARK+F E+P+ D VS+  MI  Y 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYD 153

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPF---STLLSVVA--NKLDLQ-IGRQIHTQTIVTT 305
            N    +++ LF++L     D     F     L+SV++  +++  + +   IH+  I   
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 306 AISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               V V N+L+D YAK G      A++IF  +     V + +++S Y Q G   EA  +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 364 FIEMCRANISADQA-TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  + +  +    A T +++L A +   +L +GK +H  VIR G   +V  G++++DMY 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A + F  M  +N+ SW A+I+    +G A   L+ F  M+ SG +P+ ++ +S
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+ACSH GL  EG ++FN+M  ++ + P  EHY  MVD+L R+G   +A  L+ +M  +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+WSS++ +CRIHKN+E A+ +  +LF+++   +   Y+ +S+IYA AG+W+ V +V
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDS-SNCGYYMLLSHIYADAGRWKDVERV 512

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+ RG+ K   +S +EL  +VHVF   DE HPQ  +I   +  L +++ + GY  +T
Sbjct: 513 RMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           S   HD DEE K  +L+ HSE+LAIAF ++NT  GS + V+KNLR C+DCH  IKLISKI
Sbjct: 573 SSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKI 632

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             RE  VRD+ RFHHFKDG CSC D+W
Sbjct: 633 VDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 218/448 (48%), Gaps = 24/448 (5%)

Query: 21  NLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           NL T   LFN  VD+T V SW  +I   ++     EA   F  MR      P   +F   
Sbjct: 27  NLTT---LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +  CS         Q H     FGY S + + ++L+  Y     L+ AR+VF E+P++D 
Sbjct: 83  IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDI 142

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF------AAALSAGVGLADIALG 193
           VS+ ++I G+   G   +A+ LF ++        D  F       + +SA   +    L 
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSK--HDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             +H+FV+K  F   V V N LLD Y+K     V  ARK+F ++ + D VSYN +++ YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262

Query: 252 WNEQYKESLKLFREL---QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +    E+ ++FR L   +   F+      ST+L  V++   L+IG+ IH Q I      
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFN--AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  S++DMY KCGR E A++ F  + + +   WTAMI+ Y   G+  +AL LF  M 
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380

Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            + +  +  TF S+L A +       G +  ++   R G    +     ++D+  ++G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440

Query: 428 K---DAIQTFKEMPERNIVSWNALISAC 452
           +   D IQ  K  P+  I  W++L++AC
Sbjct: 441 QKAYDLIQRMKMKPDSII--WSSLLAAC 466



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 10  NMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L+  Y K G   +A AR++F+ +VD+  VS+  ++  Y+Q     EAF++F  +  + 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
               + +T +T+L   S          +H  +I+ G    +I+  S++D YCK   ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           R+ F  M  K+  S+ A+I G+   G   +A++LF  M   G +P+  TF + L+A
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/659 (35%), Positives = 348/659 (52%), Gaps = 74/659 (11%)

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           L+  ++H+ F P      +AL +        L R +HA  V +   E+ FVA++LL  Y 
Sbjct: 7   LYHFLRHVSFPPDPHLLPSALKS---CPAQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ------------- 267
           +      AR +F  MPE + V ++ +I  Y+     + +  L  +++             
Sbjct: 64  RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123

Query: 268 -FTRFDRSQ-----------------FP----FSTLLSVVANKLDLQIGRQIHTQTIVTT 305
             +  +RS                  FP     S  LS V +  ++ +G+Q+H   +   
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSH--------------------------- 338
              +  V  +L+DMY KCGR +E   +F   SH                           
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243

Query: 339 --------ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
                   ++ V WT++++  VQ G   EA++LF  M    +  +  T   +L A A +A
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA 303

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L  G+  H F +R GF+ +V+ GSAL+DMYAK G  + A   F  MP RN+VSWNA+I 
Sbjct: 304 ALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIG 363

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A +GDA   ++ F  M +   +PD V+   VL ACS  GL EEG +YFN M Q + + 
Sbjct: 364 GYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGIS 423

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ EHYA MV +L RSG  DEA  L+ +MPFEPD  +W S++ SCR++ N+  A+ AA++
Sbjct: 424 PRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEK 483

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF++E   +A  YV +SNIYA    W+ V++V+  M+  G++K    SW+E+K+KVH+  
Sbjct: 484 LFQLEP-GNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLL 542

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           A D  HP    I  K+  L  EM + G+ P     LHD +E+ K   L  HSE+LA+A  
Sbjct: 543 AGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALG 602

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+P+ V+KNLR C DCH A+K IS    REI+VRD++RFHHFKDG CSC D+W
Sbjct: 603 LISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 189/459 (41%), Gaps = 75/459 (16%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD     + L  C     A  L   HA  +  G      + +SL+ SY ++     AR V
Sbjct: 18  PDPHLLPSALKSCPAQPLARAL---HAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF------------- 177
           F  MP+K+ V ++ALI G++  G  E A  L  +M+  G +P+  T+             
Sbjct: 75  FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134

Query: 178 ----------------------AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
                                 + ALSA   + ++++G+QVH +VVK     +  V  AL
Sbjct: 135 LDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTAL 194

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE---------- 265
           +D+Y K     E  ++F E   +D  S N ++   + N Q  E+L LFRE          
Sbjct: 195 IDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNV 254

Query: 266 -------------------------LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
                                    +Q    + +      +L   AN   L  GR  H  
Sbjct: 255 VSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCF 314

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           ++    + +V V ++LVDMYAKCG+   A+ IF  +   + V W AMI  Y   G+   A
Sbjct: 315 SLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANA 374

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
           + LF  M +     D  TF  +L A ++      G++  + + +  G    +   + ++ 
Sbjct: 375 VQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVT 434

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
           +  +SG L +A     EMP E +   W +L+ +C   G+
Sbjct: 435 LLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 172/418 (41%), Gaps = 73/418 (17%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y++ G    AR +F+ M ++  V W+ LI GYS +     A+ L   MR+  G +P
Sbjct: 58  LLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRS-AGVEP 116

Query: 72  DYVTFATLLSGCSEPDTANELI-----------------------------------QVH 96
           + +T+  L+SG +    A + +                                   QVH
Sbjct: 117 NVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVH 176

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK----- 151
             ++K G      +  +L+D Y K    D   RVF E    D  S NAL+ G ++     
Sbjct: 177 GYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVS 236

Query: 152 ------------------------------EGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                                          G + EA+ LF  MQ +G +P+  T    L
Sbjct: 237 EALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVL 296

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +A +  GR  H F ++  F+ +V+V +AL+D+Y+K      AR +F  MP  + V
Sbjct: 297 PAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVV 356

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N MI  YA +     +++LF  +Q  +       F+ +L   +     + GR+   + 
Sbjct: 357 SWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEM 416

Query: 302 IVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                IS  ++    +V +  + G+ +EA ++   +     +  W +++ +    GN+
Sbjct: 417 QQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNV 474



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           MP++N VS N +I GY   G+ A A +LF SM         V++T ++G  SQ     E 
Sbjct: 350 MPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEG 409

Query: 57  FKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELIQ 94
            + F +M+   G  P    Y    TLL    + D A +LI 
Sbjct: 410 RRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLIN 450


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/630 (35%), Positives = 356/630 (56%), Gaps = 7/630 (1%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ AR++F +M   D    N +I G+A+     EA+ L+  M   G    ++T+   L+A
Sbjct: 61  LNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAA 120

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  + LGR+ H  V+K  F  ++FV NAL+  Y        A  +F E    D V++
Sbjct: 121 CARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTW 180

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQ 300
           N+MI  +      +++  L  E+  T+ D  +    T++S+V   A   +L+ G+ +H+ 
Sbjct: 181 NIMINAHLNKGLSEKAFDLLDEM--TKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSY 238

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
           +        ++V N+++DMY KC   E A+E+F  +     + WT+M+S   + G  +EA
Sbjct: 239 SKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEA 298

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF +M    I  D+ T   +L A A+  +L  GK +H  + +     ++   +AL+DM
Sbjct: 299 LALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDM 358

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK GS+  A+Q F+ M  RN+ +WNALI   A +G  +  +  F+ M      PD V+ 
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +++L ACSH GL++EGL  F +M  K+++ P+ EHY  +VD+LCR+   D+A   +  MP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            + + ++W++++ +CR   + + A+K   ++ ++E       YV +SN+YA   QW+   
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEP-DSCGRYVMLSNLYAGVSQWDHAL 537

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYK 659
           +++K M+ +G+ K    SW+EL   +H F A D  H QT +I   IE + + +  + G+ 
Sbjct: 538 KLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHV 597

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           P T+  L D +EE K  SL  HSE+LAIA  LI+TP GSPI ++KNLR C DCH+ +K+ 
Sbjct: 598 PGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVT 657

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SK+  REI  RD SRFHHFK+G CSC DFW
Sbjct: 658 SKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 233/488 (47%), Gaps = 10/488 (2%)

Query: 4   QNTVSTNMLIS--GYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
            N + ++ LIS      SG+L  AR+LF  M +        +I GY++     EA  L+ 
Sbjct: 41  HNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYY 100

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M  + G   D  T+  +L+ C+         + H +++K G+ S L + N+L+  Y   
Sbjct: 101 FM-VERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNC 159

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAA 180
                A  VF E   +D V++N +I     +GL+E+A  L  EM  L   +P + T  + 
Sbjct: 160 GSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSL 219

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           + A   L ++  G+ +H++  +    EN+ V NA+LD+Y K D +  A+++F  + E D 
Sbjct: 220 VPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDV 279

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  M++  A +  ++E+L LF+++Q  + +  +     +LS  A    L  G+ IH  
Sbjct: 280 LSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLL 339

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                   ++ +  +LVDMYAKCG  + A ++F  +   +   W A+I      G+ E+A
Sbjct: 340 IDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDA 399

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSALL 418
           ++LF +M    +  D  TF ++L A +    +  G  +    +++ F     +     ++
Sbjct: 400 ISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGCVV 458

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           D+  ++  + DA+   + MP + N V W  L+ AC   G      K    +++   +PDS
Sbjct: 459 DLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE--LEPDS 516

Query: 478 VSLLSVLS 485
                +LS
Sbjct: 517 CGRYVMLS 524



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 160/361 (44%), Gaps = 41/361 (11%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYA--KCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           +Q H   + T  +     ++ L+   A    G    A+++F  + +        MI  Y 
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           +  N  EA++L+  M    +  D  T+  +L A A L ++ LG++ H  V+++GF S++F
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-S 471
             +AL+  Y   GS   A   F E   R++V+WN +I+A    G ++      ++M +  
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEG---------------LQYFNSMTQKY--------- 507
             +PD V+++S++ AC+  G +E G               L+  N++   Y         
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267

Query: 508 -----KLRPKKE-HYASMVDILCRSGCFDEAEKLMAQMPF---EPDEIMWSSVINSCRIH 558
                ++R K    + SM+  L +SG F EA  L  +M     E DEI    V+++C   
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
             L+  K     + K E   D     A+ ++YA  G  +   QV + MR R V     ++
Sbjct: 328 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV-----FT 382

Query: 619 W 619
           W
Sbjct: 383 W 383



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 3/193 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    N ++  Y K  ++ +A+E+FN + ++  +SWT ++ G ++   F+EA  LF  
Sbjct: 245 DENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQK 304

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ +   + D +T   +LS C++    ++   +H  I KF  N  L++  +LVD Y K  
Sbjct: 305 MQLN-KIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG 363

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +DLA +VF+ M  ++  ++NALI G A  G  E+AI LF +M+H    P D TF A L 
Sbjct: 364 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 423

Query: 183 A--GVGLADIALG 193
           A    GL D  L 
Sbjct: 424 ACSHAGLVDEGLA 436


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/581 (37%), Positives = 343/581 (59%), Gaps = 2/581 (0%)

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
           F   D   +A ++A    + I+  R +H  V+K+    + F+ + L+  Y +  C  +A 
Sbjct: 34  FSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDAL 93

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANK 288
           +LF E+P+ D VS+N +I+ ++        L L   ++F      ++     ++S  A  
Sbjct: 94  ELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGV 153

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
            +L +G+ IH   + +  + EVKV NSL+++Y KCG  E A  +F  +S  S V W +M+
Sbjct: 154 GELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMV 213

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           + +V  G  E+ +  FI M RA I++DQAT  S+L A   L    L + +H +++  G  
Sbjct: 214 AVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLD 273

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM 468
            N+   +ALLD+YAK G+L D+ + F  M   + V+W A++S+ A +G  +  ++ FE M
Sbjct: 274 GNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELM 333

Query: 469 VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
           V+ G  PD V+   +LSACSH GL+EEG  YF  M + Y +  + EHY+ MVD+L RSG 
Sbjct: 334 VREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGH 393

Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
            ++A KL+  MP EP+  +W ++I +CR+  N+E  K+ A++LF ++   D+  Y+ +SN
Sbjct: 394 LNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDP-SDSRNYITLSN 452

Query: 589 IYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN 648
           +Y+ AGQW   S+V+  M+ER + +    S++E  +K+H F   D+ HP T +I  K+E 
Sbjct: 453 MYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEE 512

Query: 649 LMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRA 708
           L+++ ++ G+   T   LHD DEE+K + +  HSE+LAIAF L+ T  G P+++ KN+R 
Sbjct: 513 LVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRI 572

Query: 709 CTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           C DCH   KLIS I  R I +RD+ RFHHF +G CSC D+W
Sbjct: 573 CGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 183/386 (47%), Gaps = 8/386 (2%)

Query: 78  TLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
           T +S CS       L   H  +IK   YN   I  + LV SY ++ C   A  +F E+P 
Sbjct: 46  TAISTCSSISYCRAL---HCRVIKSVNYNHGFI-GDQLVSSYVELGCTKDALELFDELPD 101

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           KD VS+N+LI+GF++       + L   M+  +G KP++ T    +SA  G+ ++ +G+ 
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H   VK+  +  V V N+L++LY K  C+  A  LF  M     VS+N M+  +     
Sbjct: 162 IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGL 221

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            ++ +  F  ++    +  Q    +LL    N    ++   +H   +       + +A +
Sbjct: 222 AEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATA 281

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+YAK G   ++ ++F  + +   V WTAM+S+Y   G   EA+  F  M R  +  D
Sbjct: 282 LLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPD 341

Query: 376 QATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             TF  +L A +    +  GK     +    G    V   S ++D+  +SG L DA +  
Sbjct: 342 HVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLI 401

Query: 435 KEMP-ERNIVSWNALISACAQNGDAQ 459
           K MP E N   W ALI AC   G+ +
Sbjct: 402 KSMPMEPNSGVWGALIGACRVRGNIE 427



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 173/352 (49%), Gaps = 4/352 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           + L+S YV+ G    A ELF+ + D+  VSW  LI G+S++        L   MR + G 
Sbjct: 77  DQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGL 136

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT   ++S C+     +    +H   +K G    + + NSL++ Y K  CL+ A  
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACC 196

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ M  +  VS+N+++      GL E+ I  F+ M+  G      T  + L A   L  
Sbjct: 197 LFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGV 256

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   VH +++      N+ +A ALLDLY+K   + ++ K+FG M   D V++  M++ 
Sbjct: 257 RKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSS 316

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA + + +E+++ F  +           F+ LLS  ++   ++ G+  + + +      E
Sbjct: 317 YAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKN-YFKIMYEFYGVE 375

Query: 310 VKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           ++V +   +VD+  + G   +A ++  ++    ++  W A+I A   +GN+E
Sbjct: 376 LRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIE 427



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 140/292 (47%), Gaps = 3/292 (1%)

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
           F  F       S L++ ++    +   R +H + I +   +   + + LV  Y + G  +
Sbjct: 31  FHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTK 90

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRAS 386
           +A E+F  L     V W ++IS + ++ +L   L L   M     +  ++ T   ++ A 
Sbjct: 91  DALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSAC 150

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A +  L +GK +H   ++SG +  V   ++L+++Y K G L+ A   F+ M  +++VSWN
Sbjct: 151 AGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWN 210

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           ++++     G A+  +  F  M ++G   D  +++S+L AC + G + +  +  +     
Sbjct: 211 SMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLG-VRKLAEAVHGYILN 269

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
             L        +++D+  + G   ++ K+   M   PD + W+++++S  +H
Sbjct: 270 GGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMH 320



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      L+  Y K G L+ + ++F  M++  AV+WT ++  Y+   + REA + F +
Sbjct: 273 DGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHF-E 331

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           +    G  PD+VTF  LLS CS      E
Sbjct: 332 LMVREGVVPDHVTFTHLLSACSHSGLVEE 360


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/746 (33%), Positives = 400/746 (53%), Gaps = 82/746 (10%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T S   +I+ ++++  +  AR +F+ +       +T++I GY++  +F  A +LF +M  
Sbjct: 11  TFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV 70

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                 D V++ +++ GC   D A+                                 L 
Sbjct: 71  -----KDVVSWNSMIKGCF--DCAD---------------------------------LT 90

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           +AR++F EMP++  VS+  +I GF + G  E A  LF +M                    
Sbjct: 91  MARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP------------------- 131

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              DIA                     N+++  Y  +  V +  +LF EMP  + +S+  
Sbjct: 132 -FRDIA-------------------AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTS 171

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFD--RSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           MI     + + +E+L LFR++     +   +   +  +++  AN   L  G QIH     
Sbjct: 172 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 231

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +  ++ +L+  YA C + E++  +F    H++ V WTA+++ Y      E+AL +
Sbjct: 232 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 291

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM R  +  +Q++F S L +   L +L  G+++H+  ++ G  ++VF G++L+ MY +
Sbjct: 292 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 351

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G+L D +  FK + ++NIVSWN++I  CAQ+G     L  F  MV+S  +PD ++   +
Sbjct: 352 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 411

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACSH G+ ++G   F   ++      K +HYA MVDIL RSG  +EAE+L+  MP + 
Sbjct: 412 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA 471

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           + ++W  ++++C +H  LE A++AA  +  +E    +A YV +SN+YA A +W  VS+++
Sbjct: 472 NSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSA-YVLLSNLYASASRWSDVSRIR 530

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           + M++RG+ K    SW+ +K   + F + D  HP ++ I +K+E L  ++K+ GY PD  
Sbjct: 531 REMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQR 590

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            ALHD ++E K   L YHSERLAI F LI+T EGS I VMKNLR C DCH+AIKLI+KI 
Sbjct: 591 FALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIV 650

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            R+I VRDS+RFHHF DG CSC D+W
Sbjct: 651 RRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 217/459 (47%), Gaps = 44/459 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I G     +L  AR+LF+ M +R+ VSWT +I G+ Q  +   A  LF
Sbjct: 68  MPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLF 127

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M       P                          DI  +         NS++  YC 
Sbjct: 128 YKM-------P------------------------FRDIAAW---------NSMIYGYCC 147

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFA 178
              ++   R+F+EMP ++ +S+ ++I G  + G +EEA+ LF +M   G   KP+  T+ 
Sbjct: 148 NGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYC 207

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             ++A    + +  G Q+HA V K  +  + +++ AL+  Y+    + ++ ++F     +
Sbjct: 208 CVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHM 267

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + V +  ++T Y  N +++++LK+F E+       +Q  F++ L+       L  GR+IH
Sbjct: 268 NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIH 327

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           T  +     ++V V NSL+ MY +CG   +   IF  +S  + V W ++I    Q G   
Sbjct: 328 TAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGM 387

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-L 417
            AL  F +M R+ +  D+ TF  +L A +       G+ L  +   +          A +
Sbjct: 388 WALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACM 447

Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
           +D+  +SG L++A +  + MP + N + W  L+SAC  +
Sbjct: 448 VDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 207/431 (48%), Gaps = 18/431 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N +I GY  +G +     LF  M  R  +SWT +IGG  Q  +  EA  LF
Sbjct: 130 MPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLF 189

Query: 61  VDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             M   G    P   T+  +++ C+      + +Q+HA + K GY+    I  +L+  Y 
Sbjct: 190 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 249

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
             + ++ + RVF      + V + AL+TG+     +E+A+K+F EM   G  P+  +F +
Sbjct: 250 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 309

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           AL++  GL  +  GR++H   VK     +VFV N+L+ +Y +   + +   +F  + + +
Sbjct: 310 ALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKN 369

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I   A +     +L  F ++  +  +  +  F+ LLS  ++    Q GR +  
Sbjct: 370 IVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF- 428

Query: 300 QTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGN 356
           +       +EVK+ +   +VD+  + G+ EEA+E+  N+    +++ W  ++SA      
Sbjct: 429 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 488

Query: 357 L---EEALNLFIEM---CR------ANISADQATFASILRASAELASLSLGKQL-HSFVI 403
           L   E A    I++   C       +N+ A  + ++ + R   E+    + KQ   S++ 
Sbjct: 489 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 548

Query: 404 RSGFMSNVFSG 414
             G+ +   SG
Sbjct: 549 IKGWRNEFLSG 559


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/658 (35%), Positives = 373/658 (56%), Gaps = 33/658 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A  +F  +P   +   N L+  F++    E  + L++ ++  GF    F+F   L A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 184 GVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
              L+ + LG ++H    K  F   + F+ +AL+ +Y+    +++AR LF +M   D V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N+MI  Y+ N  Y   LKL+ E++ +  +       T+LS  A+  +L  G+ IH    
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH----IST----------------- 341
                    +  SLV+MYA CG    A+E++  L      +ST                 
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304

Query: 342 ----------VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
                     V W+AMIS Y +     EAL LF EM R  I  DQ T  S++ A A + +
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L   K +H++  ++GF   +   +AL+DMYAK G+L  A + F+ MP +N++SW+++I+A
Sbjct: 365 LVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 424

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            A +GDA + +  F  M +   +P+ V+ + VL ACSH GL+EEG ++F+SM  ++++ P
Sbjct: 425 FAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISP 484

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           ++EHY  MVD+ CR+    +A +L+  MPF P+ I+W S++++C+ H  +E  + AA +L
Sbjct: 485 QREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRL 544

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
            ++E   D A  V +SNIYA   +W+ V  V+K M+ +GV K  A S +E+ ++VHVF  
Sbjct: 545 LELEPDHDGA-LVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMM 603

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFAL 691
            D  H Q++EI +K++ ++ ++K  GY P TS  L D +EE K E + +HSE+LA+ + L
Sbjct: 604 ADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGL 663

Query: 692 INTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I   + S I ++KNLR C DCH+ +KL+SK+   EI +RD +RFHHF  G CSCRD+W
Sbjct: 664 IGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 232/478 (48%), Gaps = 39/478 (8%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           L+  +S+         L++ +R +G    D  +F  LL   S+    N  +++H    KF
Sbjct: 86  LLRQFSRGPTPENTLSLYLHLRRNG-FPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKF 144

Query: 103 G-YNSILIICNSLVDSYCKI-RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
           G +++   I ++L+  Y    R +D AR +F +M  +D V++N +I G+++    +  +K
Sbjct: 145 GFFHADPFIQSALIAMYAACGRIMD-ARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV----------VKTNFV---- 206
           L+ EM+  G +P        LSA     +++ G+ +H F+          ++T+ V    
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263

Query: 207 -----------------ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
                            +++ V+ A+L  Y+K   V +AR +F  M E D V ++ MI+ 
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA + Q  E+L+LF E+Q  R    Q    +++S  AN   L   + IHT          
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + + N+L+DMYAKCG   +A+E+F N+   + + W++MI+A+   G+ + A+ LF  M  
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLK 428
            NI  +  TF  +L A +    +  G++  S +I    +S        ++D+Y ++  L+
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            A++  + MP   N++ W +L+SAC  +G+ +  L  F        +PD    L VLS
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGEIE--LGEFAATRLLELEPDHDGALVVLS 559



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 34/380 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y   G +  AR LF+ M  R  V+W I+I GYSQ   +    KL+ +M+T G ++P
Sbjct: 157 LIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSG-TEP 215

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D +   T+LS C+     +    +H  I   G+     I  SLV+ Y     + LAR V+
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275

Query: 132 KEMPQKDSVSFNALITGFAKEGLNE-------------------------------EAIK 160
            ++P K  V   A+++G+AK G+ +                               EA++
Sbjct: 276 DQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQ 335

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           LF EMQ     P   T  + +SA   +  +   + +H +  K  F   + + NAL+D+Y+
Sbjct: 336 LFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYA 395

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   +V+AR++F  MP  + +S++ MI  +A +     ++ LF  ++    + +   F  
Sbjct: 396 KCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIG 455

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           +L   ++   ++ G++  +  I    IS + +    +VD+Y +     +A E+   +   
Sbjct: 456 VLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFP 515

Query: 340 STV-PWTAMISAYVQKGNLE 358
             V  W +++SA    G +E
Sbjct: 516 PNVIIWGSLMSACQNHGEIE 535



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 125/237 (52%), Gaps = 2/237 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+++ V +  ++SGY K G +  AR +F+ MV++  V W+ +I GY++  Q  EA +LF
Sbjct: 278 LPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLF 337

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+      PD +T  +++S C+      +   +H    K G+   L I N+L+D Y K
Sbjct: 338 NEMQRRRIV-PDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAK 396

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L  AR VF+ MP+K+ +S++++I  FA  G  + AI LF  M+    +P+  TF   
Sbjct: 397 CGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGV 456

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
           L A      +  G++  + ++  + +         ++DLY + + + +A +L   MP
Sbjct: 457 LYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMP 513


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/557 (38%), Positives = 335/557 (60%), Gaps = 7/557 (1%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R VH  V    +    F+ N L+++Y K   + EAR LF EMP+ + VS+  MI+ Y+ +
Sbjct: 36  RLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNS 95

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
               ++L     +       + + +S++L      L+L   RQ+H   +     S+V V 
Sbjct: 96  NLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVR 152

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           ++L+D Y+K G   +A  +F  +     V W ++I  + Q  + +E L+L+  M RA+  
Sbjct: 153 SALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFV 212

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           ADQ+T  S+LRA   LA L LG+Q+H  V++  +  ++   +ALLDMY K GSL+DA   
Sbjct: 213 ADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLL 270

Query: 434 F-KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
           F + M E++++SW+ +I+  AQNG +   LK FE M   G +P+ +++L VL ACSH GL
Sbjct: 271 FTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGL 330

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + +G  YF SM + + + P +EHY  ++D+L R+G  DEA KL+ +M  EPD + W  ++
Sbjct: 331 VNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL 390

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            +CR+HKN++ A  AA ++ K++   DA  Y+ +SNIYA + +WE V++V++ MR RGV+
Sbjct: 391 GACRVHKNVDLAIYAAKEILKLDP-ADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVK 449

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+  +VH F   D  HP+  EI+R++  L+Q + + GY PDT+  L D + E
Sbjct: 450 KDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGE 509

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
              +SL+YHSE+LAI F L++ P    I + KNLR C DCH   KL+S++  R I +RD 
Sbjct: 510 QMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDP 569

Query: 733 SRFHHFKDGFCSCRDFW 749
            R+HHF+ G CSC D+W
Sbjct: 570 IRYHHFRGGVCSCGDYW 586



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 188/384 (48%), Gaps = 8/384 (2%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D +T++ L+  C       +   VH  +   GY     + N+L++ Y K   LD AR +F
Sbjct: 15  DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EMP ++ VS+  +I+ ++   LN +A+   + M   G +P+ +T+++ L A  GL ++ 
Sbjct: 75  DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL- 133

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             RQ+H  ++K     +VFV +AL+D YSK     +A  +F EM   D V +N +I  +A
Sbjct: 134 --RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E+L L++ ++   F   Q   +++L        L++GRQ+H    V     ++ 
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVH--VLKYDQDLI 249

Query: 312 VANSLVDMYAKCGRFEEAKEIFAN-LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
           + N+L+DMY KCG  E+A  +F   ++    + W+ MI+   Q G   +AL LF  M   
Sbjct: 250 LNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSK 309

Query: 371 NISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
               +  T   +L A +    ++ G     S     G          ++D+  ++G L +
Sbjct: 310 GPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDE 369

Query: 430 AIQTFKEM-PERNIVSWNALISAC 452
           A++   EM  E + V+W  L+ AC
Sbjct: 370 AVKLIHEMNHEPDAVTWRILLGAC 393



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 10/295 (3%)

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           +K    +   R       +S L+     +  +Q  R +H          +  + N+L++M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y K G  +EA+ +F  +   + V WT MISAY       +AL+  I M R  +  +  T+
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           +S+LRA   L +L   +QLH  +++ G  S+VF  SAL+D Y+K G   DA+  F EM  
Sbjct: 121 SSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            ++V WN++I   AQN D   TL  ++ M ++ +  D  +L SVL AC+   L+E G Q 
Sbjct: 178 GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQ- 236

Query: 500 FNSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                  + L+  ++     +++D+ C+ G  ++A  L  +M  E D I WS++I
Sbjct: 237 ----VHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMI 287



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 187/383 (48%), Gaps = 22/383 (5%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N LI+ YVK G L  AR LF+ M DR  VSWT +I  YS  N   +A    + M  
Sbjct: 51  TFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLR 110

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           +G   P+  T++++L  C   D    L Q+H  I+K G  S + + ++L+D+Y K+    
Sbjct: 111 EG-VRPNMYTYSSVLRAC---DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQH 166

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  VF EM   D V +N++I GFA+    +E + L+  M+   F     T  + L A  
Sbjct: 167 DALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACT 226

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE-MPEVDGVSYN 244
           GLA + LGRQVH  V+K  + +++ + NALLD+Y K   + +A  LF   M E D +S++
Sbjct: 227 GLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWS 284

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI   A N    ++LKLF  +      +S+ P    ++++           ++      
Sbjct: 285 TMIAGLAQNGFSADALKLFEAM------KSKGPKPNYITILGVLFACSHAGLVNDGWYYF 338

Query: 305 TAISE-------VKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGN 356
            ++ E        +    ++D+  + G+ +EA ++   ++H    V W  ++ A     N
Sbjct: 339 QSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKN 398

Query: 357 LEEALNLFIEMCRANISADQATF 379
           ++ A+    E+ + +  AD  T+
Sbjct: 399 VDLAIYAAKEILKLD-PADAGTY 420



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  +SAD  T++ +++      ++   + +H  V  +G+    F  + L++MY K G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L +A   F EMP+RN+VSW  +ISA + +      L     M++ G +P+  +  SVL A
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C   GL+   L+  +    K  L       ++++D   + G   +A  +  +M    D +
Sbjct: 127 CD--GLLN--LRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLV 181

Query: 547 MWSSVINSCRIHKNLEFAKKA-ADQLFKMEKLRDAAPYVA-MSNIYAVAGQWESVSQVKK 604
           +W+S+I          FA+ +  D+   + K    A +VA  S + +V            
Sbjct: 182 VWNSIIGG--------FAQNSDGDETLHLYKRMKRADFVADQSTLTSV------------ 221

Query: 605 AMRERGVRKVTAYSWVELKSKVHV 628
                 +R  T  + +EL  +VHV
Sbjct: 222 ------LRACTGLALLELGRQVHV 239



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 45/187 (24%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMV-DRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +Q+ +  N L+  Y K G+L  A  LF  M+ ++  +SW+ +I G +Q     +A KLF 
Sbjct: 245 DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFE 304

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M++  G  P+Y+T   +L  CS           HA ++  G+                 
Sbjct: 305 AMKSK-GPKPNYITILGVLFACS-----------HAGLVNDGW----------------- 335

Query: 122 RCLDLARRVFKEMPQKDSVS-----FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
                    F+ M +   +      +  +I    + G  +EA+KL  EM H   +P   T
Sbjct: 336 -------YYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNH---EPDAVT 385

Query: 177 FAAALSA 183
           +   L A
Sbjct: 386 WRILLGA 392


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/743 (32%), Positives = 401/743 (53%), Gaps = 16/743 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y + G++  AR  F++MV R  VSW+ +I  Y+Q+    +A +LFV M  +G    + +T
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEG-VKANAIT 60

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           F ++L  C+          +H  I+  G     +I+ N++V+ Y K   +DLAR VF+ M
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             K++V++N +I   ++    +EA  L  EM   G +P+  T  + + A   +  I+ GR
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            VH  V       +  VANAL++LY K   +  AR     +   D +S+  ++  YA + 
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             K ++ + + +         F F  LL        L +G +IH +   +    +  +  
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           +LVDMY KCG  + A+  F  +  +  V  W A+++AYV +   +E L +F  M    ++
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA------LLDMYAKSGSL 427
            D  TF SIL A A LA+L LG+  HS ++  G        SA      +++MYAK GSL
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSL 420

Query: 428 KDAIQTF---KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            DA   F   +     ++V+W+A+++A +Q G ++  L+ F  M Q G +PDSVS +S +
Sbjct: 421 ADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAI 480

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           + CSH GL+ E + +F S+   + + P + H+A +VD+L R+G   EAE LM + P    
Sbjct: 481 AGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAH 540

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
              W +++++CR + +LE A++ A    ++  LR  + Y  +++++ ++ +W+ V   ++
Sbjct: 541 HSTWMTLLSACRTYGDLERARRVA---ARLASLRSGSAYSLLASVFCLSRKWDDVRNARQ 597

Query: 605 AMRERGVRKVTAYSWVELKSKVH-VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           ++ ERG       SW+E+ ++V+  F  +D L P+  EI  ++E L  E++K GY+ D  
Sbjct: 598 SLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPI 657

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             +HD  E+ K   L YHSE++A+ F LI+TPEG+P+ ++KN+  C DCH  IK IS++ 
Sbjct: 658 KKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVA 717

Query: 724 GREITVRDSSRFHHFKDGFCSCR 746
            R IT+RD   FH F  G CSC+
Sbjct: 718 DRVITLRDDRSFHQFSHGSCSCK 740



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 223/470 (47%), Gaps = 19/470 (4%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
             + +  N +++ Y K G +  ARE+F  M  +  V+W  +I   S+ ++++EAF L  +
Sbjct: 91  GDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGE 150

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  D G  P+ +T  +++  C+   + +    VH  +   G  S   + N+LV+ Y K  
Sbjct: 151 MDLD-GLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCG 209

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  AR   + +  +D +S+  L+  +A+ G  + AI +   M H G K   FTF   L 
Sbjct: 210 KLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLE 269

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           + V +A +ALG ++H  + ++    +  +  AL+D+Y K      AR+ F  M +V  V+
Sbjct: 270 SCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVT 329

Query: 243 -YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
            +N ++  Y   +Q KE+L +F  +           F ++L   A+   L +GR  H++ 
Sbjct: 330 VWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRM 389

Query: 302 IVTTAISEVKVAN------SLVDMYAKCGRFEEAKEIFANLSHI---STVPWTAMISAYV 352
           +         VA+      S+++MYAKCG   +AK  FA          V W+AM++AY 
Sbjct: 390 LERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYS 449

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR----SGFM 408
           Q G  EEAL  F  M +  +  D  +F S   A A  +   L ++  +F        G  
Sbjct: 450 QFGLSEEALRCFYSMQQEGVKPDSVSFVS---AIAGCSHSGLVREAVAFFTSLRHDHGIA 506

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
                 + L+D+ +++G +++A    +  P   +  +W  L+SAC   GD
Sbjct: 507 PTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGD 556



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 170/337 (50%), Gaps = 4/337 (1%)

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y++   V+ AR+ F  M   + VS++ MI  YA      ++L+LF  +       +   
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F ++L   A+   + +G+ IH + +    +  +V + N++V+MY KCG  + A+E+F  +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
              +TV W  MI+A  +    +EA  L  EM    +  ++ T  S++ A A + S+S G+
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            +H  V   G  S+    +AL+++Y K G L+ A    + +  R+ +SW  L++A A++G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK-YKLRPKKEH 515
             +  +   + M   G + DS + +++L +C     +  G +  + + +   +L P  + 
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ- 299

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             ++VD+  + G  D A +   +M    D  +W++++
Sbjct: 300 -TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALL 335



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 36/334 (10%)

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY +CG    A+  F  +   + V W+AMI+AY Q+G+  +AL LF+ M    + A+  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F S+L A A L +++LGK +H  ++  G +  +V  G+ +++MY K G +  A + F+ M
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS--------- 488
             +N V+WN +I+AC+++   +       +M   G +P+ ++L+SV+ AC+         
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 489 --HCGLIEEGLQYFNSMTQKY--------KLRPKKE-----------HYASMVDILCRSG 527
             H  +  EGL+  N++            KLR  +             + +++    R G
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 528 CFDEAEKLMAQMPFEP---DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
               A  ++ +M  E    D   + +++ SC     L   ++  D+L +     D     
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
           A+ ++Y   G  ++  +    MR+  VR VT ++
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRD--VRDVTVWN 332


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/548 (39%), Positives = 326/548 (59%), Gaps = 35/548 (6%)

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           AR LF +MPE D  S+NVM+T Y  N   K +  LF  +     +R    ++ +LS  A 
Sbjct: 14  ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMP----ERDIVSWNAMLSGYAQ 69

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA------------- 334
              +   R+I  +  +   IS     N L+  Y + GR E+AK +F              
Sbjct: 70  NGFVDEAREIFYKMPLKNGIS----WNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCL 125

Query: 335 -------------NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
                        N+    ++ W+AMI+ Y Q G  EEAL+ F+EM R     ++++F  
Sbjct: 126 MGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTC 185

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
            L   + +A+L LG+QLH  ++++G+ +  + G+ALL MY K GS+ +A   F+E+ E++
Sbjct: 186 ALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKD 245

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           +VSWN +I   A++G  +  L  FE M  +G +PD  +++SVL+ACSH GL+++G +YF 
Sbjct: 246 VVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFY 305

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
           SM + Y +  K  HY  MVD+L R+G  +EA+ LM  MPFEPD   W +++ + RIH N 
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNT 365

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           E  +KAA  +F+ME   ++  Y+ +S +YA +G+W    +++  MR +GV+KV  YSW+E
Sbjct: 366 ELGEKAAQIIFEMEP-HNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLE 424

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           +++K+H F   D  HP T++I   +E +  ++K+EGY   T+   HD +EE KV  LKYH
Sbjct: 425 VQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYH 484

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           SE+LA+A+ ++  P G PI V+KNLR C DCH AIK ISKI GR I +RD+ RFH+F+ G
Sbjct: 485 SEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGG 544

Query: 742 FCSCRDFW 749
            CSCRDFW
Sbjct: 545 SCSCRDFW 552



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 211/444 (47%), Gaps = 52/444 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S N++++GYV++ +L TAR LF  M +R  VSW  ++ GY+Q     EA ++F
Sbjct: 21  MPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIF 80

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    G   + +  A + +G  E   A  L +   D         L+  N L+  + +
Sbjct: 81  YKMPLKNGISWNGLLAAYVQNGRIE--DAKRLFESKMDWT-------LVSWNCLMGGFVR 131

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R     R +F  MPQ+DS+S++A+I G+++ G +EEA+  FVEMQ    + +  +F  A
Sbjct: 132 KR-----RNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCA 186

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS    +A + LGRQ+H  +VK  +    +V NALL +Y K   + EAR  F E+ E D 
Sbjct: 187 LSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDV 246

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N MI  YA +   +E+L +F  ++ T         +T++SV+A              
Sbjct: 247 VSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDD---ATMVSVLA-------------- 289

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                A S   + +   + +    R      I A L H     +T M+    + G LEEA
Sbjct: 290 -----ACSHAGLVDQGSEYFYSMNR---DYGITAKLVH-----YTCMVDLLGRAGQLEEA 336

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL-- 418
            NL   M       D AT+ ++L AS    +  LG++    +     M    SG  +L  
Sbjct: 337 QNLMKNM---PFEPDAATWGALLGASRIHGNTELGEKAAQIIFE---MEPHNSGMYILLS 390

Query: 419 DMYAKSGSLKDAIQTFKEMPERNI 442
            +YA SG   DA +   EM  + +
Sbjct: 391 KLYAASGRWSDAGKMRLEMRNKGV 414



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 193/382 (50%), Gaps = 21/382 (5%)

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L   N ++  Y + R L  AR +F+ MP++D VS+NA+++G+A+ G  +EA ++F +M  
Sbjct: 26  LFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP- 84

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
                +  ++   L+A V    I   +++  F  K ++   +   N L+  +     V +
Sbjct: 85  ---LKNGISWNGLLAAYVQNGRIEDAKRL--FESKMDWT--LVSWNCLMGGF-----VRK 132

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ--FTRFDRSQFPFSTLLSVV 285
            R LF  MP+ D +S++ MI  Y+ N   +E+L  F E+Q    R +RS F  +  LS  
Sbjct: 133 RRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSF--TCALSTC 190

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +N   L++GRQ+H + +     +   V N+L+ MY KCG  +EA++ F  +     V W 
Sbjct: 191 SNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWN 250

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIR 404
            MI  Y + G  EEAL +F  M    I  D AT  S+L A +    +  G +  +S    
Sbjct: 251 TMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRD 310

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
            G  + +   + ++D+  ++G L++A    K MP E +  +W AL+ A   +G+ +   K
Sbjct: 311 YGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 370

Query: 464 SFEDMVQSGYQPDSVSLLSVLS 485
           + + + +   +P +  +  +LS
Sbjct: 371 AAQIIFE--MEPHNSGMYILLS 390



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 119/271 (43%), Gaps = 40/271 (14%)

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           ++  Y +  +F+ A+++F  +       W  M++ YV+  +L+ A  LF  M   +I   
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             ++ ++L   A+   +   ++    +     + N  S + LL  Y ++G ++DA + F+
Sbjct: 58  -VSWNAMLSGYAQNGFVDEARE----IFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFE 112

Query: 436 --------------------------EMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
                                      MP+R+ +SW+A+I+  +QNG ++  L  F +M 
Sbjct: 113 SKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA--SMVDILCRSG 527
           +   + +  S    LS CS+   +E G Q    +    K   +   Y   +++ + C+ G
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLV---KAGYQTGWYVGNALLAMYCKCG 229

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
             DEA     ++  E D + W+++I+    H
Sbjct: 230 SIDEARDAFQEI-LEKDVVSWNTMIHGYARH 259


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/650 (35%), Positives = 382/650 (58%), Gaps = 4/650 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G +  AR  F+ M+D+  V W ++I GY Q  +   A KLF DM +   + P
Sbjct: 51  LIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSE-AKP 109

Query: 72  DYVTFATLLS-GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           D VTFA +LS  CSE        Q+H  +++ G + + ++ N+LV  Y K R L  AR++
Sbjct: 110 DSVTFACVLSISCSEA-MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKL 168

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  MPQ D V +N +I G+ + G  ++A  LF EM   G KP   TF + L +    + +
Sbjct: 169 FDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSL 228

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
              +++H ++V+   + +V++ +AL+DLY K    V A K+F    + D V Y  MI+ Y
Sbjct: 229 KQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGY 288

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N   K++L++FR L   +   +   FS++L   A    +++GR++H   I      + 
Sbjct: 289 VLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKC 348

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V +++++MYAKCGR + A  IF  +S    + W ++I+++ Q G  EEA+ LF +M   
Sbjct: 349 PVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGME 408

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D  T ++ L A A + +L  GK++H F+I+  F S++F  SAL++MYAK G L  A
Sbjct: 409 GVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIA 468

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  M E+N V+WN++I+A   +G    +L  F +M++ G QPD ++ L++LS+C H 
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G +E+G++YF  MT++Y +  + EHYA M D+  R+G  DEA +++  MPF P   +W +
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGT 588

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CR+H N+E A+ A+  L  +E  +++  Y+ ++++ A AG+W SV +++  M+ERG
Sbjct: 589 LLGACRVHGNVELAEVASRYLLDLEP-KNSGYYLLLTHVLADAGKWRSVHKIQHLMKERG 647

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           V+KV   SW+E+ +   VF A D  HP++ +I   +++L+ E++K GY P
Sbjct: 648 VQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGYVP 697



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 255/494 (51%), Gaps = 2/494 (0%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  PD  TF  ++  C+  +       +   I++ G++  + + +SL+  Y    C++ A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RR F +M  KD V +N +I G+ + G ++ AIKLF +M     KP   TFA  LS     
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           A +  GRQ+H  VV++       V N L+ +YSK   + +ARKLF  MP++D V +N MI
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y  N    ++  LF E+           F++ L  +A    L+  ++IH   +    I
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            +V + ++L+D+Y KC     A ++F   +    V +TAMIS YV  G  ++AL +F  +
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWL 304

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  +  +  TF+SIL A A LA++ LG++LH ++I++        GSA+++MYAK G L
Sbjct: 305 LQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRL 364

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             A   F  +  ++ + WN++I++ +Q+G  +  +  F  M   G + D V++ + LSAC
Sbjct: 365 DLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC 424

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           ++   +  G +    M  K          ++++++  + G  + A +L+  +  E +E+ 
Sbjct: 425 ANIPALHYGKEIHGFMI-KGAFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVA 482

Query: 548 WSSVINSCRIHKNL 561
           W+S+I +   H  L
Sbjct: 483 WNSIIAAYGYHGYL 496



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 230/452 (50%), Gaps = 3/452 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K   L  AR+LF+ M     V W  +IGGY Q     +A  LF +M    G 
Sbjct: 150 NTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEM-ISAGI 208

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TF + L   +E  +  ++ ++H  I++ G    + + ++L+D Y K R   +A +
Sbjct: 209 KPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACK 268

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F    + D V + A+I+G+   G+N++A+++F  +      P+  TF++ L A  GLA 
Sbjct: 269 MFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAA 328

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           I LGR++H +++K    E   V +A++++Y+K   +  A  +FG +   D + +N +IT 
Sbjct: 329 IKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITS 388

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           ++ + + +E++ LFR++            S  LS  AN   L  G++IH   I     S+
Sbjct: 389 FSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESD 448

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           +   ++L++MYAKCG+   A+ +F  +   + V W ++I+AY   G L ++L LF  M  
Sbjct: 449 LFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLE 508

Query: 370 ANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             I  D  TF +IL +      +  G +         G  + +   + + D++ ++G L 
Sbjct: 509 EGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLD 568

Query: 429 DAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           +A +    MP     S W  L+ AC  +G+ +
Sbjct: 569 EAFEVITSMPFPPAASVWGTLLGACRVHGNVE 600



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 99/188 (52%), Gaps = 2/188 (1%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M    +  D+ TF  +++    L ++ LGK +   ++  GF  ++F  S+L+ +YA +G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++DA + F +M +++ V WN +I+   Q G++ + +K F+DM+ S  +PDSV+   VLS 
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
                ++E G Q  + +  +  L        ++V +  +     +A KL   MP + D +
Sbjct: 121 SCSEAMVEYGRQ-LHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMP-QIDLV 178

Query: 547 MWSSVINS 554
           +W+ +I  
Sbjct: 179 VWNRMIGG 186


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/557 (40%), Positives = 343/557 (61%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G   HA +++     +   +N L+++YSK   V  ARKLF EMP    VS+N M+  +  
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N   +++L LF ++Q      S+F  S+++   A K  +   +Q+H   + T   S V V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+D+YAKCG  ++A  +F  +   S V W++M++ YVQ    EEAL LF       +
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             +Q T +S L A A  A+L  GKQ+ +   ++G  SN+F  S+L+DMYAK G +++A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  + E+N+V WNA++S  +++  +   +  FE M Q G  P+ ++ +SVLSACSH GL
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +E+G +YF+ M + + + P   HY+ MVDIL R+G   EA+  + +MPF+    MW S++
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 425

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCRI++NLE A+ AA  LF++E   +A  +V +SNIYA   +WE V++ +  ++E   +
Sbjct: 426 ASCRIYRNLELAEVAAKHLFEIEP-HNAGNHVLLSNIYAANDRWEEVARARNLLKESKAK 484

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+K KVH F   +  HP+  EI  K+E+L+ EMKK GYK  T   LHD +E 
Sbjct: 485 KERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEES 544

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            K E L++HSE+LA+ F ++  P G+PI +MKNLR C DCH+ +KL S IT REI VRD+
Sbjct: 545 RKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDT 604

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFK+G+CSC +FW
Sbjct: 605 NRFHHFKNGYCSCGEFW 621



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 201/376 (53%), Gaps = 2/376 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL   +    A E +  HA II+ G  +  I  N L++ Y K   ++ AR++F EMP + 
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N ++    + G  E+A+ LF++MQ  G   S+FT ++ + A      +   +Q+H 
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F +KT    NVFV  ALLD+Y+K   V +A  +F  MPE   V+++ M+  Y  NE Y+E
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L LF   Q    + +QF  S+ LS  A +  L  G+Q+   +  T   S + V +SL+D
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG  EEA  +F+++   + V W A++S + +     EA+  F +M +  I  +  T
Sbjct: 293 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           + S+L A + L  +  G++    +IR   +S NV   S ++D+  ++G L +A      M
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 412

Query: 438 PERNIVS-WNALISAC 452
           P     S W +L+++C
Sbjct: 413 PFDATASMWGSLLASC 428



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 195/358 (54%), Gaps = 3/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T+++NML++ Y K G + +AR+LF+ M  R+ VSW  ++G ++Q     +A  LF+ M+
Sbjct: 81  DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G S  ++ T ++++  C+      E  Q+H   +K   +S + +  +L+D Y K   +
Sbjct: 141 KEGTSCSEF-TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLV 199

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF+ MP++  V++++++ G+ +  L EEA+ LF   Q +G + + FT ++ALSA 
Sbjct: 200 KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 259

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  G+QV A   KT    N+FV ++L+D+Y+K   + EA  +F  + E + V +N
Sbjct: 260 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 319

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +++ ++ + +  E++  F ++Q      +   + ++LS  ++   ++ GR+     I  
Sbjct: 320 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 379

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             +S  V   + +VD+  + G   EAK+    +   +T   W +++++     NLE A
Sbjct: 380 HNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELA 437



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 2/235 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      L+  Y K G +  A  +F  M +R+ V+W+ ++ GY Q   + EA  LF  
Sbjct: 180 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 239

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            +   G + +  T ++ LS C+      E  QV A   K G  S + + +SL+D Y K  
Sbjct: 240 AQA-MGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCG 298

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  VF  + +K+ V +NA+++GF++   + EA+  F +MQ +G  P+D T+ + LS
Sbjct: 299 IIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 358

Query: 183 AGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A   L  +  GR+    +++  N   NV   + ++D+  +   + EA+     MP
Sbjct: 359 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP 413



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 4/172 (2%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L++SA   +   G   H+ +IR G  ++  + + L++MY+K G ++ A + F EMP R+
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYF 500
           +VSWN ++ +  QNGD +  L  F  M + G      ++ SV+ AC + C + E   +  
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE--CKQL 170

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +    K  L        +++D+  + G   +A  +   MP E  ++ WSS++
Sbjct: 171 HGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP-ERSDVTWSSMV 221


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/661 (34%), Positives = 366/661 (55%), Gaps = 4/661 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +I+ Y K G++  AR++F++M     VSWT +I GYSQ  Q  +A  +++ M T  G 
Sbjct: 198 NHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQM-TRSGQ 256

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +TF +++  C      +   Q+HA +IK  +   L   N+L+  Y     ++ A  
Sbjct: 257 FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASN 316

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLA 188
           VF  +P KD +S+  +ITG+ + G   EA+ LF ++   G ++P++F F +  SA   L 
Sbjct: 317 VFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLL 376

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           ++  G+QVH   VK     NVF   +L D+Y+K   +  A+  F ++   D VS+N +I 
Sbjct: 377 ELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIA 436

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A N    E++  FR++           + +LL    + + L  GRQIH+  +      
Sbjct: 437 AFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDK 496

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           E+ V NSL+ MY KC    +A  +F ++S + + V W A++SA +QK    E   L+ EM
Sbjct: 497 EITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEM 556

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
             +    D  T  ++L   AEL SL +G Q+H + I+SG + +V   + L+DMYAK GSL
Sbjct: 557 HFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSL 616

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K A   F      +IVSW++LI   AQ G     L  F  M   G QP+ V+ L  LSAC
Sbjct: 617 KHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSAC 676

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+EEG + + SM  ++ + P +EH++ +VD+L R+GC  EAE  + +   + D   
Sbjct: 677 SHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITA 736

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C+ H N++ A++ A  + K++   ++A  V + NI+A AG WE V++++K M+
Sbjct: 737 WKTLLAACKTHNNVDIAERGAGNILKLDP-SNSAAMVMLCNIHASAGNWEEVAKLRKLMK 795

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           + GV+KV   SW+E+K K H+F + D  HPQ N I   +E L  ++  +GY P  SC + 
Sbjct: 796 QMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPCQSCYIQ 855

Query: 668 D 668
           +
Sbjct: 856 N 856



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 228/459 (49%), Gaps = 5/459 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            +  S N LIS Y   G +  A  +F  +  +  +SW  +I GY Q     EA  LF D+
Sbjct: 293 HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL 352

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G   P+   F ++ S CS         QVH   +KFG    +    SL D Y K   
Sbjct: 353 LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGF 412

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A+  F ++   D VS+NA+I  FA  G   EAI  F +M H+G  P   T+ + L  
Sbjct: 413 LPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCT 472

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-VDGVS 242
                 +  GRQ+H+++VK  F + + V N+LL +Y+K   + +A  +F ++    + VS
Sbjct: 473 CGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVS 532

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +++     +Q  E+ +L++E+ F+         +TLL   A    L +G Q+H  +I
Sbjct: 533 WNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSI 592

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +  I +V V N L+DMYAKCG  + A+++F +  ++  V W+++I  Y Q G   EALN
Sbjct: 593 KSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALN 652

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVIRSGFMSNVFSGSALLDMY 421
           LF  M    +  ++ T+   L A + +  +  G +L+ S     G        S ++D+ 
Sbjct: 653 LFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLL 712

Query: 422 AKSGSLKDAIQTF--KEMPERNIVSWNALISACAQNGDA 458
           A++G L +A +TF  K   + +I +W  L++AC  + + 
Sbjct: 713 ARAGCLHEA-ETFIQKSGLDADITAWKTLLAACKTHNNV 750



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 8/303 (2%)

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTTAISEV 310
             YKE+L+ F      +   S F  ST  S+V   AN   L   ++IH   + +     +
Sbjct: 137 HHYKEALEAFDF--HLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSI 194

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + N +++MY KCG  ++A+++F  +   + V WT+MIS Y Q G   +A+ ++I+M R+
Sbjct: 195 ILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRS 254

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
               DQ TF S+++A      + LG+QLH+ VI+S F  ++ S +AL+ MY   G ++ A
Sbjct: 255 GQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHA 314

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSH 489
              F  +P ++++SW  +I+   Q G     L  F D+++ G YQP+     SV SACS 
Sbjct: 315 SNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSS 374

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +E G Q  + M  K+ LR       S+ D+  + G    A+    Q+   PD + W+
Sbjct: 375 LLELEYGKQ-VHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWN 432

Query: 550 SVI 552
           ++I
Sbjct: 433 AII 435



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 6/361 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N  +   L   Y K G L +A+  F  + +   VSW  +I  ++      EA   F  M
Sbjct: 395 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 454

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G  PD +T+ +LL  C  P   N+  Q+H+ I+K G++  + +CNSL+  Y K   
Sbjct: 455 -IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSH 513

Query: 124 LDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           L  A  VF+++ +  + VS+NA+++   ++    E  +L+ EM   G KP   T    L 
Sbjct: 514 LHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLG 573

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               L  + +G QVH + +K+  + +V V N L+D+Y+K   +  AR +F     +D VS
Sbjct: 574 TCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVS 633

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ +I  YA      E+L LFR +       ++  +   LS  ++   ++ G +++    
Sbjct: 634 WSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSME 693

Query: 303 VTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHIST--VPWTAMISAYVQKGNLEE 359
               I   +   S +VD+ A+ G   EA E F   S +      W  +++A     N++ 
Sbjct: 694 TEHGIPPTREHFSCIVDLLARAGCLHEA-ETFIQKSGLDADITAWKTLLAACKTHNNVDI 752

Query: 360 A 360
           A
Sbjct: 753 A 753


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/557 (40%), Positives = 343/557 (61%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G   HA +++     +   +N L+++YSK   V  ARKLF EMP    VS+N M+  +  
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N   +++L LF ++Q      S+F  S+++   A K  +   +Q+H   + T   S V V
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+D+YAKCG  ++A  +F  +   S V W++M++ YVQ    EEAL LF       +
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             +Q T +S L A A  A+L  GKQ+ +   ++G  SN+F  S+L+DMYAK G +++A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  + E+N+V WNA++S  +++  +   +  FE M Q G  P+ ++ +SVLSACSH GL
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +E+G +YF+ M + + + P   HY+ MVDIL R+G   EA+  + +MPF+    MW S++
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 398

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCRI++NLE A+ AA  LF++E   +A  +V +SNIYA   +WE V++ +  ++E   +
Sbjct: 399 ASCRIYRNLELAEVAAKHLFEIEP-HNAGNHVLLSNIYAANDRWEEVARARNLLKESKAK 457

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+K KVH F   +  HP+  EI  K+E+L+ EMKK GYK  T   LHD +E 
Sbjct: 458 KERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEES 517

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            K E L++HSE+LA+ F ++  P G+PI +MKNLR C DCH+ +KL S IT REI VRD+
Sbjct: 518 RKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDT 577

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFK+G+CSC +FW
Sbjct: 578 NRFHHFKNGYCSCGEFW 594



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 201/376 (53%), Gaps = 2/376 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL   +    A E +  HA II+ G  +  I  N L++ Y K   ++ AR++F EMP + 
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N ++    + G  E+A+ LF++MQ  G   S+FT ++ + A      +   +Q+H 
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F +KT    NVFV  ALLD+Y+K   V +A  +F  MPE   V+++ M+  Y  NE Y+E
Sbjct: 146 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L LF   Q    + +QF  S+ LS  A +  L  G+Q+   +  T   S + V +SL+D
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG  EEA  +F+++   + V W A++S + +     EA+  F +M +  I  +  T
Sbjct: 266 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           + S+L A + L  +  G++    +IR   +S NV   S ++D+  ++G L +A      M
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 385

Query: 438 PERNIVS-WNALISAC 452
           P     S W +L+++C
Sbjct: 386 PFDATASMWGSLLASC 401



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 195/358 (54%), Gaps = 3/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T+++NML++ Y K G + +AR+LF+ M  R+ VSW  ++G ++Q     +A  LF+ M+
Sbjct: 54  DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G S  ++ T ++++  C+      E  Q+H   +K   +S + +  +L+D Y K   +
Sbjct: 114 KEGTSCSEF-TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLV 172

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF+ MP++  V++++++ G+ +  L EEA+ LF   Q +G + + FT ++ALSA 
Sbjct: 173 KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 232

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  G+QV A   KT    N+FV ++L+D+Y+K   + EA  +F  + E + V +N
Sbjct: 233 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 292

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +++ ++ + +  E++  F ++Q      +   + ++LS  ++   ++ GR+     I  
Sbjct: 293 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 352

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             +S  V   + +VD+  + G   EAK+    +   +T   W +++++     NLE A
Sbjct: 353 HNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELA 410



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 2/235 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      L+  Y K G +  A  +F  M +R+ V+W+ ++ GY Q   + EA  LF  
Sbjct: 153 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 212

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            +   G + +  T ++ LS C+      E  QV A   K G  S + + +SL+D Y K  
Sbjct: 213 AQA-MGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCG 271

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  VF  + +K+ V +NA+++GF++   + EA+  F +MQ +G  P+D T+ + LS
Sbjct: 272 IIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 331

Query: 183 AGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A   L  +  GR+    +++  N   NV   + ++D+  +   + EA+     MP
Sbjct: 332 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMP 386



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 4/172 (2%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L++SA   +   G   H+ +IR G  ++  + + L++MY+K G ++ A + F EMP R+
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYF 500
           +VSWN ++ +  QNGD +  L  F  M + G      ++ SV+ AC + C + E   +  
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE--CKQL 143

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +    K  L        +++D+  + G   +A  +   MP E  ++ WSS++
Sbjct: 144 HGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP-ERSDVTWSSMV 194


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/675 (33%), Positives = 385/675 (57%), Gaps = 2/675 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+ + L+  Y K  +L  + ++F+ + D+  +SW+  I G  Q +Q     KLF +M+
Sbjct: 191 DVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ 250

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G       T+A++   C+    +    Q+H   +K  + S +I+  + +D Y K   +
Sbjct: 251 RKG-IGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNM 309

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A ++F  +P  +  S+NA+I G+A+     +A KLF+++Q   F   + + + ALSA 
Sbjct: 310 SDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAA 369

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +   + G Q+H   +K+N   N+ VANA+LD+Y K   +VEA  LF EM   D VS+N
Sbjct: 370 AVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWN 429

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +IT    NE   ++L  F  +  ++ +  +F + ++L   A +     G ++H + I +
Sbjct: 430 AIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKS 489

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               ++ V ++LVDMY+KCG  EEA++I   L   + V W A+IS +  +   E++   F
Sbjct: 490 GMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFF 549

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    +  D  T+A++L   A LA++ LGKQ+H+ +I+   +S+V+  S L+DMY+K 
Sbjct: 550 SHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKC 609

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G++ D++  F++ P+R+ V+WNA+I   A +G  +  L+ FE M+    +P+  + +SVL
Sbjct: 610 GNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVL 669

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            ACSH G  ++GL YF  M   Y L P+ EHY+ MVDIL RSG  +EA +L+  MPFE D
Sbjct: 670 RACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEAD 729

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            I+W ++++ C+I  N+E A+KAA  L K++   D++ Y  +SNIYA AG W+ VS++++
Sbjct: 730 AIIWRTLLSICKIQGNVEVAEKAASSLLKLDP-EDSSAYTLLSNIYADAGMWQQVSKIRQ 788

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            MR   ++K    SW+E+K +VH F   D+ HP+   I   ++ L+ +M++ G  P+   
Sbjct: 789 TMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDT 848

Query: 665 ALHDEDEEIKVESLK 679
              +E EE + + +K
Sbjct: 849 IQVEEVEENRHQKVK 863



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/553 (32%), Positives = 296/553 (53%), Gaps = 4/553 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKL 59
           MP ++ VS N ++ G   +G +  A+ +FNSM      VSW  LI GY Q    +++  +
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F+ MR D G   D+ T A  L  CS  +     IQ+H   ++ G++  ++  ++LVD Y 
Sbjct: 145 FLKMR-DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   L+ +  VF E+P K+ +S++A I G  +       +KLF EMQ  G   S  T+A+
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
              +  GL+   LG Q+H   +KT+F  +V V  A LD+Y+K D + +A KLF  +P+ +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             SYN MI  YA NEQ  ++ KLF +LQ   F   +   S  LS  A       G Q+H 
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I +   S + VAN+++DMY KCG   EA  +F  +     V W A+I+A  Q  +  +
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            L+ F  M R+ +  D+ T+ S+L+A A   + S G ++H  +I+SG    +F GSAL+D
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVD 503

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+K G +++A +    + E+ +VSWNA+IS  +    ++ + + F  M++ G +PD+ +
Sbjct: 504 MYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFT 563

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             +VL  C++   +  G Q    M  K +L       +++VD+  + G   ++  +  + 
Sbjct: 564 YATVLDTCANLATVGLGKQIHAQMI-KLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622

Query: 540 PFEPDEIMWSSVI 552
           P + D + W+++I
Sbjct: 623 P-KRDSVTWNAMI 634



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 286/604 (47%), Gaps = 68/604 (11%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ +   CS         + HA +I  G+   + + N L+  Y K   L+ A +VF+EM
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 135 PQK--------------------------------DSVSFNALITGFAKEGLNEEAIKLF 162
           PQ+                                D VS+N+LI+G+ + G  +++I +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
           ++M+ LG      T A +L     L D  LG Q+H   V+  F  +V   +AL+D+Y+K 
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
           + + ++  +F E+P+ + +S++  I     N+Q    LKLF+E+Q      SQ  ++++ 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A     ++G Q+H   + T   S+V V  + +DMYAKC    +A ++F+ L   +  
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            + AMI  Y +     +A  LF+++ + + S D+ + +  L A+A +   S G QLH   
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           I+S   SN+   +A+LDMY K G+L +A   F EM  R+ VSWNA+I+AC QN     TL
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++S  +PD  +  SVL AC+       G++    +  K  +  K    +++VD+
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRII-KSGMGLKMFVGSALVDM 504

Query: 523 LCRSGCFDEAEKL----------------------------------MAQMPFEPDEIMW 548
             + G  +EAEK+                                  M +M  EPD   +
Sbjct: 505 YSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTY 564

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW-ESVSQVKKAMR 607
           ++V+++C     +   K+   Q+ K+E L D      + ++Y+  G   +S+   +KA +
Sbjct: 565 ATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPK 624

Query: 608 ERGV 611
              V
Sbjct: 625 RDSV 628



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 53/237 (22%)

Query: 364 FIEMCRANISAD-------QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
           F+++C A+ S         + TF+ I +  +   +L  GK+ H+ +I SGF   VF  + 
Sbjct: 5   FLQLCAASTSTTTQTISSTRKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNC 64

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA----------------------- 453
           L+ MY K  +L+ A + F+EMP+R+IVSWN ++  CA                       
Sbjct: 65  LIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVS 124

Query: 454 ---------QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE---GLQYFN 501
                    QNGD Q ++  F  M   G   D  +L   L  CS   L+E+   G+Q   
Sbjct: 125 WNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICS---LLEDQVLGIQIHG 181

Query: 502 SMTQ---KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
              Q    Y +       +++VD+  +    +++  + +++P + + I WS+ I  C
Sbjct: 182 IAVQMGFDYDVVTG----SALVDMYAKCNSLEDSLDVFSELP-DKNWISWSAAIAGC 233


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 365/646 (56%), Gaps = 4/646 (0%)

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
           NS   I N ++  YC  +    A R F ++  +D  S+  +I+ + +EG  +EA+ LF+ 
Sbjct: 111 NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLR 170

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M  LG  P+   F+  + +    + + LG+Q+H+ +++  F  ++ +   + ++Y K   
Sbjct: 171 MLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGW 230

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           +  A     +M     V+   ++  Y    + +++L LF ++     +   F FS +L  
Sbjct: 231 LDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKA 290

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A   DL  G+QIH+  I     SEV V   LVD Y KC RFE A++ F ++   +   W
Sbjct: 291 CAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSW 350

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           +A+I+ Y Q G  + AL +F  +    +  +   + +I +A + ++ L  G Q+H+  I+
Sbjct: 351 SALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIK 410

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G ++ +   SA++ MY+K G +  A Q F  + + + V+W A+I A A +G A   L+ 
Sbjct: 411 KGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRL 470

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F++M  SG +P+ V+ + +L+ACSH GL++EG Q+ +SMT KY + P  +HY  M+DI  
Sbjct: 471 FKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYS 530

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G   EA +++  MPFEPD + W S++  C   +NLE    AAD +F+++ L D+A YV
Sbjct: 531 RAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPL-DSATYV 589

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            M N+YA+AG+W+  +Q +K M ER +RK  + SW+ +K KVH F   D  HPQT +I  
Sbjct: 590 IMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYS 649

Query: 645 KIENLMQEMKK-EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
           K++ L    KK E    +   AL D  E  + + L  HSERLAIA+ LI T   +PI+V 
Sbjct: 650 KLKELNVSFKKGEERLLNEENALCDFTE--RKDQLLDHSERLAIAYGLICTAADTPIMVF 707

Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           KN R+C DCH   K +S +TGRE+ VRD +RFHH   G CSCRD+W
Sbjct: 708 KNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 227/454 (50%), Gaps = 3/454 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N N    N ++  Y    +   A   F+ +VDR   SW  +I  Y+++ +  EA  LF
Sbjct: 109 MANSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLF 168

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M  D G  P++  F+TL+   ++P   +   Q+H+ +I+  + + + I   + + Y K
Sbjct: 169 LRM-LDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVK 227

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD A     +M +K +V+   L+ G+ +   N +A+ LF +M   G +   F F+  
Sbjct: 228 CGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSII 287

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   L D+  G+Q+H++ +K      V V   L+D Y K      AR+ F  + E + 
Sbjct: 288 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND 347

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S++ +I  Y  + ++  +L++F+ ++      + F ++ +    +   DL  G QIH  
Sbjct: 348 FSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHAD 407

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I    ++ +   ++++ MY+KCG+ + A + F  +    TV WTA+I A+   G   EA
Sbjct: 408 AIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEA 467

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLD 419
           L LF EM  + +  +  TF  +L A +    +  GKQ L S   + G    +   + ++D
Sbjct: 468 LRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMID 527

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +Y+++G L +A++  + MP E +++SW +L+  C
Sbjct: 528 IYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/627 (37%), Positives = 369/627 (58%), Gaps = 10/627 (1%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + + + D  S+N++I   A+ G + EA+  F  M+ L   P+  +F  A+ A   L DI 
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q H       +  ++FV++AL+ +YS    + +ARK+F E+P+ + VS+  MI  Y 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPF---STLLSVVA--NKLDLQ-IGRQIHTQTIVTT 305
            N    +++ LF++L     D     F     L+SV++  +++  + +   IH+  I   
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 306 AISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               V V N+L+D YAK G      A++IF  +     V + +++S Y Q G   EA  +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 364 FIEMCRANISADQA-TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  + +  +    A T +++L A +   +L +GK +H  VIR G   +V  G++++DMY 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A + F  M  +N+ SW A+I+    +G A   L+ F  M+ SG +P+ ++ +S
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+ACSH GL  EG ++FN+M  ++ + P  EHY  MVD+L R+G   +A  L+ +M  +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD I+WSS++ +CRIHKN+E A+ +  +LF+++   +   Y+ +S+IYA AG+W+ V +V
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDS-SNCGYYMLLSHIYADAGRWKDVERV 512

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+ RG+ K   +S +EL  +VHVF   DE HPQ  +I   +  L +++ + GY  +T
Sbjct: 513 RMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
           S   HD DEE K  +L+ HSE+LAIAF ++NT  GS + V+KNLR C+DCH  IKLISKI
Sbjct: 573 SSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKI 632

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             RE  VRD+ RFHHFKDG CSC D+W
Sbjct: 633 VDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 218/448 (48%), Gaps = 24/448 (5%)

Query: 21  NLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           NL T   LFN  VD+T V SW  +I   ++     EA   F  MR      P   +F   
Sbjct: 27  NLTT---LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +  CS         Q H     FGY S + + ++L+  Y     L+ AR+VF E+P+++ 
Sbjct: 83  IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF------AAALSAGVGLADIALG 193
           VS+ ++I G+   G   +A+ LF ++        D  F       + +SA   +    L 
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSK--HDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             +H+FV+K  F   V V N LLD Y+K     V  ARK+F ++ + D VSYN +++ YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262

Query: 252 WNEQYKESLKLFREL---QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +    E+ ++FR L   +   F+      ST+L  V++   L+IG+ IH Q I      
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFN--AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  S++DMY KCGR E A++ F  + + +   WTAMI+ Y   G+  +AL LF  M 
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380

Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            + +  +  TF S+L A +       G +  ++   R G    +     ++D+  ++G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440

Query: 428 K---DAIQTFKEMPERNIVSWNALISAC 452
           +   D IQ  K  P+  I  W++L++AC
Sbjct: 441 QKAYDLIQRMKMKPDSII--WSSLLAAC 466



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 10  NMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L+  Y K G   +A AR++F+ +VD+  VS+  ++  Y+Q     EAF++F  +  + 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
               + +T +T+L   S          +H  +I+ G    +I+  S++D YCK   ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           R+ F  M  K+  S+ A+I G+   G   +A++LF  M   G +P+  TF + L+A
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/747 (32%), Positives = 401/747 (53%), Gaps = 24/747 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K G +  AR +F+S+      SWTIL+  Y+Q    +   +L   M   G  
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG-V 178

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHAD---IIKFGYNSILIICNSLVDSYCKIRCLDL 126
            P+ VT AT++   SE    +E  ++HA      +  Y+ +L+   +L+D Y K   +  
Sbjct: 179 WPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLV--TALIDMYAKCGDIFH 236

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  VF +   KD    NA+I+ + + G   +A+  F  +Q  G +P+  T+A    A   
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
               +  R  H   + +    +V V  AL+ +YS+   + +AR++F  MP  + V++NVM
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVM 356

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA      E+L+L+  ++    +  +  F  +L   +    L  GR IH   +    
Sbjct: 357 IAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGY 416

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEALNLF 364
            S + V ++L+ MY+ CG   +A ++F     +H S + WTAM++A  + G    AL LF
Sbjct: 417 DSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALF 476

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    + A+  TF S + A + + +L  G  +   VI +G++ +V  G++L+++Y K 
Sbjct: 477 RKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKC 536

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A++ F  +  +NIV+WN +++A +QNG+   + +  ++M   G QP+ ++LL++L
Sbjct: 537 GRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNML 596

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
             CSH GL+ + + YF SM   + L P  EHY  +VD+L RSG  +E E  ++  PF  D
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W S++ SC IH ++E   +AA ++  ++  ++A+PYV +SN++A  G  ++V  + K
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDP-KNASPYVLLSNMFAAIGMLDAVKSLAK 715

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
              ER ++K  + S++E+   VH F     LH    +I  ++    +EM++ G+ P    
Sbjct: 716 LAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP---- 771

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD           YH E+LAIAF  I++P G P+ V+KNLR C  CH  IK I K+TG
Sbjct: 772 -LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKHICKMTG 822

Query: 725 REITVRDSSRFHHFK--DGFCSCRDFW 749
           R+I+VR+ +R HHF+  D  CSC D+W
Sbjct: 823 RDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 213/487 (43%), Gaps = 38/487 (7%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N++    N +IS Y++ G    A   FN +                              
Sbjct: 246 NKDLACCNAMISAYIQLGYTVDAVSTFNRI------------------------------ 275

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                G  P+ VT+A L   C+     ++    H   I       +++  +LV  Y +  
Sbjct: 276 --QPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCG 333

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ ARRVF  MP K+ V++N +I G+A+EG  +EA++L+V M+  G +P + TF   L 
Sbjct: 334 SLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLE 393

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--GEMPEVDG 240
           +      +A GR +H  VV   +  ++ V +AL+ +YS    + +A  +F  G       
Sbjct: 394 SCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSV 453

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  M+T    N + + +L LFR++       +   F + +   ++   L  G  I  +
Sbjct: 454 ISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFER 513

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            IVT  + +V +  SL+++Y KCGR + A E+F +LS  + V W  +++A  Q G    +
Sbjct: 514 VIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLS 573

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLD 419
             L  EM       ++ T  ++L   +    ++       S V     +        L+D
Sbjct: 574 AELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVD 633

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           +  +SG L++        P   + V W +L+ +C  + D +  L++   ++  G  P + 
Sbjct: 634 LLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVL--GLDPKNA 691

Query: 479 SLLSVLS 485
           S   +LS
Sbjct: 692 SPYVLLS 698


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/740 (33%), Positives = 398/740 (53%), Gaps = 82/740 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +I+ ++++  +  AR +F+ +       +T++I GY++  +F  A +LF +M        
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-----K 55

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V++ +++ GC   D A+                                 L +AR++F
Sbjct: 56  DVVSWNSMIKGCF--DCAD---------------------------------LTMARKLF 80

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            EMP++  VS+  +I GF + G  E A  LF +M                       DIA
Sbjct: 81  DEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP--------------------FRDIA 120

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
                                N+++  Y  +  V +  +LF EMP  + +S+  MI    
Sbjct: 121 -------------------AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLD 161

Query: 252 WNEQYKESLKLFRELQFTRFD--RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            + + +E+L LFR++     +   +   +  +++  AN   L  G QIH          +
Sbjct: 162 QHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFD 221

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             ++ +L+  YA C + E++  +F    H++ V WTA+++ Y      E+AL +F EM R
Sbjct: 222 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 281

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  +Q++F S L +   L +L  G+++H+  ++ G  ++VF G++L+ MY + G+L D
Sbjct: 282 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND 341

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
            +  FK + ++NIVSWN++I  CAQ+G     L  F  MV+S  +PD ++   +LSACSH
Sbjct: 342 GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSH 401

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G+ ++G   F   ++      K +HYA MVDIL RSG  +EAE+L+  MP + + ++W 
Sbjct: 402 SGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWL 461

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
            ++++C +H  LE A++AA  +  +E    +A YV +SN+YA A +W  VS++++ M++R
Sbjct: 462 VLLSACTMHSKLEVAERAAKCIIDLEPHCSSA-YVLLSNLYASASRWSDVSRIRREMKQR 520

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G+ K    SW+ +K   + F + D  HP ++ I +K+E L  ++K+ GY PD   ALHD 
Sbjct: 521 GITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDV 580

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           ++E K   L YHSERLAI F LI+T EGS I VMKNLR C DCH+AIKLI+KI  R+I V
Sbjct: 581 EDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIV 640

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS+RFHHF DG CSC D+W
Sbjct: 641 RDSTRFHHFMDGRCSCGDYW 660



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 217/459 (47%), Gaps = 44/459 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I G     +L  AR+LF+ M +R+ VSWT +I G+ Q  +   A  LF
Sbjct: 52  MPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLF 111

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M       P                          DI  +         NS++  YC 
Sbjct: 112 YKM-------P------------------------FRDIAAW---------NSMIYGYCC 131

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFA 178
              ++   R+F+EMP ++ +S+ ++I G  + G +EEA+ LF +M   G   KP+  T+ 
Sbjct: 132 NGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYC 191

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             ++A    + +  G Q+HA V K  +  + +++ AL+  Y+    + ++ ++F     +
Sbjct: 192 CVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHM 251

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + V +  ++T Y  N +++++LK+F E+       +Q  F++ L+       L  GR+IH
Sbjct: 252 NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIH 311

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           T  +     ++V V NSL+ MY +CG   +   IF  +S  + V W ++I    Q G   
Sbjct: 312 TAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGM 371

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-L 417
            AL  F +M R+ +  D+ TF  +L A +       G+ L  +   +          A +
Sbjct: 372 WALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACM 431

Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
           +D+  +SG L++A +  + MP + N + W  L+SAC  +
Sbjct: 432 VDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 207/431 (48%), Gaps = 18/431 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N +I GY  +G +     LF  M  R  +SWT +IGG  Q  +  EA  LF
Sbjct: 114 MPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLF 173

Query: 61  VDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             M   G    P   T+  +++ C+      + +Q+HA + K GY+    I  +L+  Y 
Sbjct: 174 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 233

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
             + ++ + RVF      + V + AL+TG+     +E+A+K+F EM   G  P+  +F +
Sbjct: 234 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 293

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           AL++  GL  +  GR++H   VK     +VFV N+L+ +Y +   + +   +F  + + +
Sbjct: 294 ALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKN 353

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +I   A +     +L  F ++  +  +  +  F+ LLS  ++    Q GR +  
Sbjct: 354 IVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF- 412

Query: 300 QTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGN 356
           +       +EVK+ +   +VD+  + G+ EEA+E+  N+    +++ W  ++SA      
Sbjct: 413 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 472

Query: 357 L---EEALNLFIEM---CR------ANISADQATFASILRASAELASLSLGKQL-HSFVI 403
           L   E A    I++   C       +N+ A  + ++ + R   E+    + KQ   S++ 
Sbjct: 473 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 532

Query: 404 RSGFMSNVFSG 414
             G+ +   SG
Sbjct: 533 IKGWRNEFLSG 543


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/595 (36%), Positives = 353/595 (59%), Gaps = 12/595 (2%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A+ +   M+  G      T++  +   +    +  G++VH  +    +    F+ N L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD---RS 274
           +Y K + + EA+ LF +MPE + VS+  MI+ Y+ N Q  +  +  R L F   D    +
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYS-NAQLND--RAMRLLAFMFRDGVMPN 385

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F FS++L       DL   +Q+H+  +     S+V V ++L+D+Y+K G   EA ++F 
Sbjct: 386 MFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFR 442

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +    +V W ++I+A+ Q  + +EAL+L+  M R    ADQ+T  S+LRA   L+ L L
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+Q H  V++  F  ++   +ALLDMY K GSL+DA   F  M +++++SW+ +I+  AQ
Sbjct: 503 GRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG +   L  FE M   G +P+ +++L VL ACSH GL+ EG  YF SM   Y + P +E
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE 620

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  M+D+L R+   D+  KL+ +M  EPD + W +++++CR  +N++ A  AA ++ K+
Sbjct: 621 HYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKL 680

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           +  +D   YV +SNIYA++ +W  V++V++ M++RG+RK    SW+E+  ++H F   D+
Sbjct: 681 DP-QDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDK 739

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HPQ +EI R++   +  +   GY PDT+  L D + E + +SL+YHSE+LAI F +++ 
Sbjct: 740 SHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSF 799

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P+   I + KNL+ C DCH   KLI+++  R I +RD  R+HHF+DG CSC D+W
Sbjct: 800 PKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 206/400 (51%), Gaps = 21/400 (5%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   D +T++ L+  C       E  +VH  I   GY+    + N L++ Y K   L+ A
Sbjct: 280 GVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEA 339

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           + +F +MP+++ VS+  +I+ ++   LN+ A++L   M   G  P+ FTF++ L A   L
Sbjct: 340 QVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL 399

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            D+   +Q+H++++K     +VFV +AL+D+YSK   ++EA K+F EM   D V +N +I
Sbjct: 400 YDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSII 456

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             +A +    E+L L++ ++   F   Q   +++L    +   L++GRQ H    V    
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVH--VLKFD 514

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++ + N+L+DMY KCG  E+AK IF  ++    + W+ MI+   Q G   EALNLF  M
Sbjct: 515 QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM 574

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-------GSALLDM 420
                  +  T   +L A +    ++ G     +  RS  M+N++           +LD+
Sbjct: 575 KVQGPKPNHITILGVLFACSHAGLVNEG----WYYFRS--MNNLYGIDPGREHYGCMLDL 628

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC--AQNGD 457
             ++  L D ++   EM  E ++V+W  L+ AC   QN D
Sbjct: 629 LGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVD 668



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 146/262 (55%), Gaps = 6/262 (2%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T  TN+LI+ YVK   L  A+ LF+ M +R  VSWT +I  YS       A +L   M  
Sbjct: 320 TFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR 379

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           DG   P+  TF+++L  C   +   +L Q+H+ I+K G  S + + ++L+D Y K+  L 
Sbjct: 380 DGVM-PNMFTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELL 435

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A +VF+EM   DSV +N++I  FA+    +EA+ L+  M+ +GF     T  + L A  
Sbjct: 436 EALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACT 495

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L+ + LGRQ H  V+K  F +++ + NALLD+Y K   + +A+ +F  M + D +S++ 
Sbjct: 496 SLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWST 553

Query: 246 MITCYAWNEQYKESLKLFRELQ 267
           MI   A N    E+L LF  ++
Sbjct: 554 MIAGLAQNGFSMEALNLFESMK 575



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 9/220 (4%)

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
           P T  +  +  + +L  A+++   M R  + AD  T++ +++      ++  GK++H  +
Sbjct: 252 PETESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHI 311

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC--AQNGDAQA 460
             +G+    F  + L++MY K   L++A   F +MPERN+VSW  +ISA   AQ  D   
Sbjct: 312 FSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAM 371

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L +F  M + G  P+  +  SVL AC         L+  +S   K  L       ++++
Sbjct: 372 RLLAF--MFRDGVMPNMFTFSSVLRACERL----YDLKQLHSWIMKVGLESDVFVRSALI 425

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
           D+  + G   EA K+  +M    D ++W+S+I +   H +
Sbjct: 426 DVYSKMGELLEALKVFREM-MTGDSVVWNSIIAAFAQHSD 464



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N L+  Y K G+L  A+ +FN M  +  +SW+ +I G +Q     EA  LF  
Sbjct: 514 DQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFES 573

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M+   G  P+++T   +L  CS     NE
Sbjct: 574 MKVQ-GPKPNHITILGVLFACSHAGLVNE 601


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 35/592 (5%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           L +++HA ++K    ++  + N LL+ Y K   + +A +LF  +P  D V++  ++T   
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTAISE 309
            + +   +L + R L  T F    F F++L+   AN   L ++ G+Q+H +  ++    +
Sbjct: 81  LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY------------------ 351
             V +SL+DMYAK G  +  + +F ++S ++++ WT MIS Y                  
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 352 -------------VQKGNLEEALNLFIEMCRANIS-ADQATFASILRASAELASLSLGKQ 397
                        VQ GN  +A +LF+EM    IS  D    +S++ A A LA   LGKQ
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H  VI  G+ S +F  +AL+DMYAK   L  A   F EM  +++VSW ++I   AQ+G 
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           A+  L  +++MV +G +P+ V+ + ++ ACSH GL+ +G   F +M + + + P  +HY 
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            ++D+  RSG  DEAE L+  MP  PDE  W+++++SC+ H N + A + AD L  + K 
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNL-KP 439

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D + Y+ +SNIYA AG WE VS+V+K M     +K   YS ++L    HVF A +  HP
Sbjct: 440 EDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHP 499

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
             +EI   +  L +EM+K GY PDTS  LHD D++ K   L +HSERLA+A+ L+    G
Sbjct: 500 MRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 559

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + I ++KNLR C DCH  +KLIS IT REI VRD+ R+HHFKDG CSC DFW
Sbjct: 560 TVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 211/434 (48%), Gaps = 45/434 (10%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++HA IIK G N    I N+L+++Y K   +  A ++F  +P++D V++ +L+T      
Sbjct: 24  KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFV 211
               A+ +   +   GF P  F FA+ + A   +G+  +  G+QVHA    + F ++  V
Sbjct: 84  RPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVV 143

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            ++L+D+Y+K       R +F  +  ++ +S+  MI+ YA + +  E+ +LFR+  +   
Sbjct: 144 KSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY--- 200

Query: 272 DRSQFPFSTLLS------------------------------------VVANKLDLQIGR 295
            R+ F ++ L+S                                      AN    ++G+
Sbjct: 201 -RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H   I     S + ++N+L+DMYAKC     AK IF  +     V WT++I    Q G
Sbjct: 260 QMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHG 319

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSG 414
             EEAL L+ EM  A +  ++ TF  ++ A +    +S G+ L  + V   G   ++   
Sbjct: 320 QAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHY 379

Query: 415 SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SG 472
           + LLD++++SG L +A    + MP   +  +W AL+S+C ++G+ Q  ++  + ++    
Sbjct: 380 TCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKP 439

Query: 473 YQPDSVSLLSVLSA 486
             P S  LLS + A
Sbjct: 440 EDPSSYILLSNIYA 453



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 186/397 (46%), Gaps = 37/397 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           NQ+    N L++ Y K G +  A +LF+++  R  V+W  L+   +  N+   A  +   
Sbjct: 35  NQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRS 94

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + +  G  PD+  FA+L+  C+        +  QVHA      ++   ++ +SL+D Y K
Sbjct: 95  LLST-GFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAK 153

Query: 121 IRCLDLAR-------------------------------RVFKEMPQKDSVSFNALITGF 149
               D  R                               R+F++ P ++  ++ ALI+G 
Sbjct: 154 FGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGL 213

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
            + G   +A  LFVEM+H G   +D    ++ + A   LA   LG+Q+H  V+   +   
Sbjct: 214 VQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESC 273

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +F++NAL+D+Y+K   +V A+ +F EM   D VS+  +I   A + Q +E+L L+ E+  
Sbjct: 274 LFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVL 333

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFE 327
                ++  F  L+   ++   +  GR +    +    IS  ++    L+D++++ G  +
Sbjct: 334 AGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLD 393

Query: 328 EAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNL 363
           EA+ +   +      P W A++S+  + GN + A+ +
Sbjct: 394 EAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRI 430



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 111/232 (47%), Gaps = 16/232 (6%)

Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
           SA   S  L K+LH+ +I++G   +    + LL+ Y K G ++DA+Q F  +P R+ V+W
Sbjct: 13  SAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAW 72

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL--IEEGLQYFNSM 503
            +L++AC  +      L     ++ +G+ PD     S++ AC++ G+  +++G Q    +
Sbjct: 73  ASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQ----V 128

Query: 504 TQKYKLRPKKEH---YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHK 559
             ++ L P  +     +S++D+  + G  D    +   +    + I W+++I+   R  +
Sbjct: 129 HARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSIS-SLNSISWTTMISGYARSGR 187

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
             E     A +LF+    R+   + A+ +    +G       +   MR  G+
Sbjct: 188 KFE-----AFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGI 234


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/570 (38%), Positives = 338/570 (59%), Gaps = 2/570 (0%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L + V    +  GRQ+H  ++ +    +  ++  L+DLY+    V  AR+LF  MP+ + 
Sbjct: 69  LQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNV 128

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
             +NV+I  YA     + +++L+R +     +   F +  +L   A  LDL+ GR++H +
Sbjct: 129 FLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQR 188

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
              T    +V V   +VDMYAKCG  ++A+ +F  ++    V W +MI+AY Q G   EA
Sbjct: 189 VSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEA 248

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L L  +M    I    AT  S + A+A+ A+L  G++LH F  R GF       ++L+DM
Sbjct: 249 LALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDM 308

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVS 479
           YAKSG ++ A   F+++ +R +VSWNA+I     +G A   L  F  M       PD+++
Sbjct: 309 YAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNIT 368

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            + VLSAC+H G++EE  ++F  M   Y ++P  +HY  ++D+L  +G F+EA  L+  M
Sbjct: 369 FVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGM 428

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             EPD  +W +++N C+IHKN+E  + A  +L ++E   DA  YV +SNIYA +G+WE  
Sbjct: 429 SIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEP-EDAGNYVHLSNIYAQSGKWEKA 487

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           ++V+K M  RG++K+ A SW+ELK K H F   D  HP+++EI  ++E L   M   GY 
Sbjct: 488 ARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYV 547

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD     H+ D++ K   ++ HSERLAIAF LI+TP G+ +LV KNLR C DCH  IKLI
Sbjct: 548 PDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLI 607

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S+I  REI +RD +R+HHF +G CSC+D+W
Sbjct: 608 SQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 184/385 (47%), Gaps = 7/385 (1%)

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           Y    ++L  C    +     Q+H  ++  G     ++   LVD Y     +  ARR+F 
Sbjct: 62  YHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFD 121

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
            MP+++   +N LI  +A+EG  E A++L+  M   G +P +FT+   L A   L D+  
Sbjct: 122 GMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLET 181

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR+VH  V  T + ++VFV   ++D+Y+K  CV +AR +F  +   D V +N MI  Y  
Sbjct: 182 GREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQ 241

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N +  E+L L R++       +     + +S  A+   L  GR++H          + K+
Sbjct: 242 NGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKL 301

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRAN 371
             SLVDMYAK G  + A+ +F  L     V W AMI  Y   G+ +EAL LF +M   A 
Sbjct: 302 KTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQ 361

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDA 430
           ++ D  TF  +L A      +   K+    ++ +      V   + ++D+   +G  ++A
Sbjct: 362 VTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEA 421

Query: 431 IQTFKEM---PERNIVSWNALISAC 452
               K M   P+  I  W AL++ C
Sbjct: 422 YDLIKGMSIEPDSGI--WGALLNGC 444



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 175/369 (47%), Gaps = 7/369 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV +  L+  Y   G +  AR LF+ M  R    W +LI  Y+++     A +L+  M 
Sbjct: 96  DTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGM- 154

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G +PD  T+  +L  C+         +VH  +    +   + +C  +VD Y K  C+
Sbjct: 155 VEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCV 214

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D AR VF  +  +D+V +N++I  + + G   EA+ L  +M   G  P+  T  +A+SA 
Sbjct: 215 DDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAA 274

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
              A +  GR++H F  +  F     +  +L+D+Y+K   V  AR LF ++ + + VS+N
Sbjct: 275 ADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWN 334

Query: 245 VMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            MI  Y  +    E+L LF +++   +       F  +LS   +   ++  ++     + 
Sbjct: 335 AMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVN 394

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---E 358
             +I   V+    ++D+    GRFEEA ++   +S    +  W A+++      N+   E
Sbjct: 395 AYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGE 454

Query: 359 EALNLFIEM 367
            AL   IE+
Sbjct: 455 LALQKLIEL 463



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 93/174 (53%), Gaps = 6/174 (3%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           SIL++     SL  G+QLH  ++ SG   +    + L+D+YA  G +  A + F  MP+R
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           N+  WN LI A A+ G  +A ++ +  MV+ G +PD+ +   VL AC+    +E G +  
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 501 NSMTQKYKLRPKKEHY--ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
             ++     R  ++ +  A +VD+  + GC D+A  +   +    D ++W+S+I
Sbjct: 187 QRVSGT---RWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMI 236


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/634 (35%), Positives = 380/634 (59%), Gaps = 12/634 (1%)

Query: 124 LDLARRVFKEMP------QKDSVSFNALITGFAKEGLNEEAIKLF--VEMQHLGFKPSDF 175
           LD+  R  KE P      +K SV   + I          +A+++F   E++  GF     
Sbjct: 77  LDVGDR--KETPLKETHVKKSSVGICSQIEKLVLCKKYRDALEMFEIFELED-GFHVGYS 133

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T+ A ++A +GL  I   +++  ++V   F  + ++ N +L ++ K   +++A +LF EM
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           P  + VS+  +I+ Y  +  Y E+ +LF  ++   +D     F+T++   A    +  GR
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           Q+H+  I      ++ V+ +L+DMY+KCG  E+A  +F  +   + V W ++I+ Y   G
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
             EEAL+L+ EM  + +  D  TF+ I+R  + LAS++  KQ+H+ ++R+GF  +V + +
Sbjct: 314 YSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANT 373

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+D Y+K G + DA   F  M  RNI+SWNALI+    +G  +  +  FE M++ G  P
Sbjct: 374 ALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMP 433

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           + V+ L+VLSACS  GL E G + F SMT+ +K++P+  H+A M+++L R G  DEA  L
Sbjct: 434 NHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYAL 493

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           + + PF+P   MW++++ +CR+H NLE  K AA++L+ ME  +  + Y+ + NIY  +G+
Sbjct: 494 IRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEK-LSNYIVLLNIYNSSGK 552

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
            +  + V + ++ +G+R + A SW+E+ ++ H F + D+ H Q  ++  K++ LM  + K
Sbjct: 553 LKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISK 612

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
            GY P+    +  + +E + +   YHSE+LAIA+ L+NT E +P+ ++++ R C+DCH+ 
Sbjct: 613 LGYVPEEQNFMLPDVDENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSV 672

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IKLI+ IT REI +RD+SRFHHF+DG CSC D+W
Sbjct: 673 IKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 230/458 (50%), Gaps = 5/458 (1%)

Query: 52  QFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
           ++R+A ++F     + G    Y T+  L++ C    +   + ++   ++  G+     + 
Sbjct: 111 KYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMR 170

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N ++  + K   +  A R+F EMP +++VS+  +I+G+   G   EA +LF+ M+   + 
Sbjct: 171 NRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYD 230

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
               TFA  + A  GL  I  GRQ+H+  +K    +++FV+ AL+D+YSK   + +A  +
Sbjct: 231 CGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCV 290

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F EMP+   V +N +I  YA +   +E+L L+ E++ +      F FS ++ + +    +
Sbjct: 291 FDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASV 350

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
              +Q+H   +      +V    +LVD Y+K G+ ++A+ +F  +S  + + W A+I+ Y
Sbjct: 351 ARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGY 410

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G+ EEA+++F +M R  +  +  TF ++L A +       G ++   + R       
Sbjct: 411 GNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPR 470

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMV 469
               + ++++  + G L +A    ++ P +   + W AL+ AC  +G+ +  L  F    
Sbjct: 471 AMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLE--LGKFAAEK 528

Query: 470 QSGYQPDSVS-LLSVLSACSHCGLIEEGLQYFNSMTQK 506
             G +P+ +S  + +L+  +  G ++E    F ++ +K
Sbjct: 529 LYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRK 566



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 219/479 (45%), Gaps = 58/479 (12%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+Q   +  +L+  +VK G +  A  LF+ M  R AVSW  +I GY     + EAF+LF+
Sbjct: 165 PDQYMRNRVLLM--HVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFI 222

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            MR +   D    TFAT++   +  +      Q+H+  IK G    + +  +L+D Y K 
Sbjct: 223 LMREE-FYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKC 281

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ A  VF EMP K  V +N++I G+A  G +EEA+ L+ EM+  G K   FTF+  +
Sbjct: 282 GSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIII 341

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
                LA +A  +QVHA +V+  F  +V    AL+D YSK   V +AR +F  M   + +
Sbjct: 342 RICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNII 401

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +I  Y  +   +E++ +F ++       +   F  +LS                  
Sbjct: 402 SWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLS------------------ 443

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-----WTAMISAYVQKGN 356
               +IS               G FE   EIF +++    V      +  MI    ++G 
Sbjct: 444 --ACSIS---------------GLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGL 486

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS--FVIRSGFMSNVFSG 414
           L+EA  L   + +A        +A++LRA     +L LGK      + +    +SN    
Sbjct: 487 LDEAYAL---IRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYI-- 541

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ---NGDAQATLKSFEDMVQ 470
             LL++Y  SG LK+A   F+ +  + +     ++ AC+    N    A L   +  VQ
Sbjct: 542 -VLLNIYNSSGKLKEAADVFQTLKRKGL----RMLPACSWIEVNNQPHAFLSGDKHHVQ 595


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/705 (34%), Positives = 373/705 (52%), Gaps = 48/705 (6%)

Query: 92   LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
            L  +HA  +K G    L   N L+  Y K   +D AR++F E+PQ+++ ++  LI+GF++
Sbjct: 308  LGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSR 367

Query: 152  EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
             G +E   KLF EM+  G  P+ +T ++         ++ LG+ VHA++++     +V +
Sbjct: 368  AGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVL 427

Query: 212  ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF--- 268
             N++LDLY K      A ++F  M E D VS+N+MI+ Y      ++SL +FR L +   
Sbjct: 428  GNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDV 487

Query: 269  ----TRFDR-SQFPF--------------STLLSVVA---------NKLDLQIGRQIHTQ 300
                T  D   QF +               T  SVV          +   +++GRQ+H  
Sbjct: 488  VSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGM 547

Query: 301  TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS----------------HISTVPW 344
             +      +  + +SLV+MY KCGR + A  +  ++                     V W
Sbjct: 548  VLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSW 607

Query: 345  TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
              M+S YV  G  E+ L  F  M R  +  D  T  +I+ A A    L  G+ +H++  +
Sbjct: 608  GLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHK 667

Query: 405  SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
             G   + + GS+L+DMY+KSGSL DA   F++  E NIV W ++IS CA +G  +  +  
Sbjct: 668  IGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICL 727

Query: 465  FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
            FE+M+  G  P+ V+ L VL+AC H GL+EEG +YF  M   Y + P  EH  SMVD+  
Sbjct: 728  FEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYG 787

Query: 525  RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
            R+G   E +  + +        +W S ++SCR+HKN+E  K  ++ L ++    D   YV
Sbjct: 788  RAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAP-SDPGAYV 846

Query: 585  AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
             +SN+ A   +W+  ++V+  M +RG++K    SW++LK ++H F   D  HPQ  EI  
Sbjct: 847  LLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYS 906

Query: 645  KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
             ++ L+  +K+ GY  D    + D +EE     + +HSE+LA+ F +INT   +PI ++K
Sbjct: 907  YLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIK 966

Query: 705  NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            NLR CTDCH  IK  S++  REI +RD  RFHHFK G CSC D+W
Sbjct: 967  NLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 252/537 (46%), Gaps = 53/537 (9%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q   S N L++ YVKS N+  AR+LF+ +  R   +WTILI G+S+       FKLF +M
Sbjct: 322 QTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREM 381

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R  G   P+  T ++L   CS          VHA +++ G ++ +++ NS++D Y K + 
Sbjct: 382 RAKGAC-PNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKV 440

Query: 124 LDLARRV-------------------------------FKEMPQKDSVSFNALITGFAKE 152
            + A RV                               F+ +P KD VS+N ++ G  + 
Sbjct: 441 FEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQF 500

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G   +A++    M   G + S  TF+ AL     L+ + LGRQ+H  V+K  F  + F+ 
Sbjct: 501 GYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIR 560

Query: 213 NALLDLYSKHDCVVEARKLFGEMP----------------EVDGVSYNVMITCYAWNEQY 256
           ++L+++Y K   +  A  +  ++P                +   VS+ +M++ Y WN +Y
Sbjct: 561 SSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKY 620

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           ++ LK FR +            +T++S  AN   L+ GR +H          +  V +SL
Sbjct: 621 EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSL 680

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           +DMY+K G  ++A  IF   +  + V WT+MIS     G  ++A+ LF EM    I  ++
Sbjct: 681 IDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNE 740

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSALLDMYAKSGSLKDAIQTF 434
            TF  +L A      L  G +    +++  +  N  V   ++++D+Y ++G L +     
Sbjct: 741 VTFLGVLNACCHAGLLEEGCRYFR-MMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFI 799

Query: 435 KEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSACSH 489
            E    ++ S W + +S+C  + + +      E ++Q +   P +  LLS + A +H
Sbjct: 800 FENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNH 856



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 196/445 (44%), Gaps = 44/445 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M   + VS N++IS Y+++G++  + ++F  +  +  VSW  ++ G  Q    R+A +  
Sbjct: 451 MNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQL 510

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G++   VTF+  L   S         Q+H  ++KFG+     I +SLV+ YCK
Sbjct: 511 YCM-VECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCK 569

Query: 121 IRCLDLARRVFKEMP----------------QKDSVSFNALITGFAKEGLNEEAIKLFVE 164
              +D A  V K++P                +   VS+  +++G+   G  E+ +K F  
Sbjct: 570 CGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRL 629

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M          T    +SA      +  GR VHA+  K     + +V ++L+D+YSK   
Sbjct: 630 MVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGS 689

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           + +A  +F +  E + V +  MI+  A + Q K+++ LF E+       ++  F  +L+ 
Sbjct: 690 LDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNA 749

Query: 285 VANKLDLQIG-RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE-IFAN-LSHIST 341
             +   L+ G R              V+   S+VD+Y + G   E K  IF N +SH+++
Sbjct: 750 CCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTS 809

Query: 342 VPWTAMISAYVQKGNLE-----------------EALNLFIEMCRANISADQATFASIL- 383
           V W + +S+     N+E                  A  L   MC +N   D+A     L 
Sbjct: 810 V-WKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLM 868

Query: 384 -----RASAELASLSLGKQLHSFVI 403
                +     + + L  Q+H+F++
Sbjct: 869 HQRGIKKQPGQSWIQLKDQIHTFIM 893


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/515 (40%), Positives = 328/515 (63%), Gaps = 2/515 (0%)

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           M   D  S+  +I  YA N+   E+L L   +   RF  + F F++LL          IG
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
            QIH  T+      +V V ++L+DMYA+CGR + A  +F  L   + V W A+I+ + +K
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ E  L +F EM R    A   T++S+  A A + +L  GK +H+ +I+SG   + F G
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           + +LDMYAKSGS+ DA + F  + ++++V+WN++++A AQ G  +  +  FE+M + G  
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
            + ++ LS+L+ACSH GL++EG QYF+ M +++ L P+ +HY ++VD+L R+G  ++A  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            + +MP +P   +W +++ SCR+HKN +  + AAD +F+++   D  P V + NIYA  G
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDP-DDTGPPVLLYNIYASTG 358

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           QW++ ++V+K M+  GV+K  A SWVE+++ VH+F AND+ HP++ EI +K E +  +++
Sbjct: 359 QWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 418

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           K GY P+T   L   DE+ +   L+YHSE++A+AFALIN P G+ I +MKN+R C DCH+
Sbjct: 419 KAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHS 478

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           A + ISK+  REI VRD++RFHHF  G CSC D+W
Sbjct: 479 AFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 177/327 (54%), Gaps = 1/327 (0%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           M  +D  S+ +LI G+A+  + +EA+ L + M    FKP+ FTFA+ L A    A   +G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            Q+HA  VK ++ ++V+V +ALLD+Y++   +  A  +F ++   +GVS+N +I  +A  
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
              + +L +F E+Q   F+ + F +S++ S +A    L+ G+ +H   I +       V 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+++DMYAK G   +A+++F ++     V W +M++A+ Q G   EA+  F EM +  + 
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            +Q TF SIL A +    +  GKQ    +        +     ++D+  ++G L DA+  
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVF 300

Query: 434 FKEMPERNIVS-WNALISACAQNGDAQ 459
             +MP +   + W AL+ +C  + +A+
Sbjct: 301 IFKMPMKPTAAVWGALLGSCRMHKNAK 327



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 162/298 (54%), Gaps = 1/298 (0%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M  R   SWT LI GY+Q +   EA  L + M       P+  TFA+LL       ++  
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGR-FKPNGFTFASLLKAAGASASSGI 59

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
             Q+HA  +K+ ++  + + ++L+D Y +   +D+A  VF ++  K+ VS+NALI GFA+
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           +G  E  + +F EMQ  GF+ + FT+++  SA  G+  +  G+ VHA ++K+    + FV
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            N +LD+Y+K   +++ARK+F  + + D V++N M+T +A     +E++  F E++    
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             +Q  F ++L+  ++   ++ G+Q            E+    ++VD+  + G   +A
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDA 297



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y KSG++  AR++F+ +  +  V+W  ++  ++Q    REA   F +MR   G 
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRK-CGV 239

Query: 70  DPDYVTFATLLSGCSEPDTANE 91
             + +TF ++L+ CS      E
Sbjct: 240 HLNQITFLSILTACSHGGLVKE 261


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/666 (34%), Positives = 388/666 (58%), Gaps = 3/666 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + LI  Y++ G +  A +LF+ ++ +  V W +++ GY++        K F  MR
Sbjct: 168 NEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMR 227

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D  S P+ VTF  +LS C+     +  +Q+H  ++  G +    I NSL+  Y K    
Sbjct: 228 MDQIS-PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRF 286

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A ++F+ M + D+V++N +I+G+ + GL EE++  F EM   G  P   TF++ L + 
Sbjct: 287 DDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSV 346

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
               ++   RQ+H ++++ +   ++F+ +AL+D Y K   V  A+K+F +   VD V + 
Sbjct: 347 SKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFT 406

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ Y  N    ++L++FR L   +   ++    ++L V+   L L++GR++H   I  
Sbjct: 407 AMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKK 466

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              +   +  +++DMYAKCGR   A EIF  LS    V W +MI+   Q  N   A+++F
Sbjct: 467 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIF 526

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M  + I  D  + ++ L A A L S S GK +H F+I+     +V+S S L+DMYAK 
Sbjct: 527 RQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKC 586

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
           G+LK A+  F  M E+NIVSWN++I+A   +G  + +L  F +MV+ SG +PD ++ L +
Sbjct: 587 GNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEI 646

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           +S C H G ++EG+++F SMTQ Y ++P++EHYA +VD+  R+G   EA + +  MPF P
Sbjct: 647 ISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPP 706

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W +++ + R+HKN+E AK A+ +L  ++   ++  YV +SN +A  G+WESV++V+
Sbjct: 707 DAGVWGTLLGASRLHKNVELAKVASSRLMDLDPW-NSGYYVLISNAHANTGEWESVTKVR 765

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             M+ER V+K+  YSW+E+    H+F + D  HP+++ I   + +L++E++ EGY P   
Sbjct: 766 SLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIYSLLNSLLEELRLEGYIPQPY 825

Query: 664 CALHDE 669
             LH E
Sbjct: 826 LPLHPE 831



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 256 YKESLKLFRELQFTRFDRSQFP--FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           YK+SL L       RF     P   S LL   +N   L+ G+Q+H   IV     +    
Sbjct: 13  YKKSLPLRNSY---RFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTD 69

Query: 314 NSLVDMYAKCGRFEEAKEIFANL-SHISTV-PWTAMISAYVQKGNLEEALNLFIEMCRAN 371
             ++ MYA CG F    ++F  L S +S++ PW ++IS++V+ G L +AL  + +M    
Sbjct: 70  ERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFG 129

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +S D +TF  +++A   L +    + L   V   G   N F  S+L+  Y + G +  A 
Sbjct: 130 VSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAG 189

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  + +++ V WN +++  A+ G + + +K F  M      P++V+   VLS C+   
Sbjct: 190 KLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKL 249

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           LI+ G+Q  + +     L  +     S++ +  + G FD+A KL   M    D + W+ +
Sbjct: 250 LIDLGVQ-LHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCM 307

Query: 552 IN 553
           I+
Sbjct: 308 IS 309



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 14/304 (4%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-PEVDGV-SYNVMITCY 250
           G+QVHAFV+      + +    +L +Y+         K+F  +   +  +  +N +I+ +
Sbjct: 50  GKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSF 109

Query: 251 AWNEQYKESLKL-FRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                  ++L   F+ L F    D S FP      V         G +  + T+ +  + 
Sbjct: 110 VRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK---GIEFLSDTVSSLGMD 166

Query: 309 EVK-VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             + VA+SL+  Y + G+ + A ++F  +     V W  M++ Y + G  +  +  F  M
Sbjct: 167 CNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLM 226

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS---ALLDMYAKS 424
               IS +  TF  +L   A    + LG QLH  V+ SG     F GS   +LL MY+K 
Sbjct: 227 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGL---DFEGSIKNSLLSMYSKC 283

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G   DAI+ F+ M   + V+WN +IS   Q+G  + +L  F +M+ SG  PD+++  S+L
Sbjct: 284 GRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLL 343

Query: 485 SACS 488
            + S
Sbjct: 344 PSVS 347


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/650 (35%), Positives = 373/650 (57%), Gaps = 14/650 (2%)

Query: 112 NSLVDSYCKIRCLDLARRVFK-EMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           N+L+  Y ++  +  A+R+F    P + D V++N +++   + G+ +EA++   +M  LG
Sbjct: 55  NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 114

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEA 228
            +P   TFA+AL A   L  + +GR++HA+V+K +    N FVA+AL+D+Y+ H+ V +A
Sbjct: 115 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 174

Query: 229 RKLFGEMPEVD---GVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSV 284
           R++F  +P+     G+ +N MI  YA     +E+L+LF  ++    F   +   +++L  
Sbjct: 175 RQVFDMVPDSGKQLGM-WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPA 233

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
            A          +H   +         V N+L+DMYA+ G+ + A+ IFA +     V W
Sbjct: 234 CARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSW 293

Query: 345 TAMISAYVQKGNLEEALNLFIEMCR---ANISADQATFASILRASAELASLSLGKQLHSF 401
             +I+  V +G++ +A  L  EM +     +  +  T  ++L   A LA+ + GK++H +
Sbjct: 294 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 353

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            +R    ++V  GSAL+DMYAK G L  +   F  +P RN ++WN LI A   +G     
Sbjct: 354 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEA 413

Query: 462 LKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
              F+ M  SG  +P+ V+ ++ L+ACSH G+++ GLQ F++M + + + P  +  A +V
Sbjct: 414 TVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 473

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           DIL R+G  DEA  ++  M     ++  WS+++ +CR+H+N+   + A ++L ++E    
Sbjct: 474 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE- 532

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
           A+ YV + NIY+ AGQW   ++V+  MR RGV K    SW+E+   +H F A +  HP +
Sbjct: 533 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 592

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            E+   +E L  EM   GY PDTSC LHD D+  K   L+ HSE+LAIAF L+    G+ 
Sbjct: 593 EEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGAT 652

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I V KNLR C DCH A K +SK+ GREI +RD  RFHHF++G CSC D+W
Sbjct: 653 IRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 218/458 (47%), Gaps = 18/458 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N L+S Y + G +A A+ LF          V+W  ++    Q   F EA +   DM    
Sbjct: 55  NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDM-VAL 113

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCL 124
           G  PD VTFA+ L  CS  +  +   ++HA +IK      NS   + ++LVD Y     +
Sbjct: 114 GVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANS--FVASALVDMYATHEQV 171

Query: 125 DLARRVFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAAL 181
             AR+VF  +P   K    +NA+I G+A+ G++EEA++LF  M+   GF P + T A+ L
Sbjct: 172 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 231

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A       A    VH +VVK     N FV NAL+D+Y++      AR++F  +   D V
Sbjct: 232 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 291

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTR---FDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           S+N +IT         ++ +L RE+Q         +     TLL   A       G++IH
Sbjct: 292 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIH 351

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              +     ++V V ++LVDMYAKCG    ++ +F  L   +T+ W  +I AY   G   
Sbjct: 352 GYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGG 411

Query: 359 EALNLFIEM-CRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSA 416
           EA  LF  M        ++ TF + L A +    +  G QL H+     G        + 
Sbjct: 412 EATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILAC 471

Query: 417 LLDMYAKSGSLKD--AIQTFKEMPERNIVSWNALISAC 452
           ++D+  ++G L +  A+ T  E  E+ + +W+ ++ AC
Sbjct: 472 VVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 509



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 196/411 (47%), Gaps = 29/411 (7%)

Query: 169 GFKPSDFTFAAALSAGVGL----ADIALGRQVHAFVVKTNFVEN--VFVANALLDLYSKH 222
           G   + FT  + L A   L    A + LGR+ HAF +K   +     F  NALL +Y++ 
Sbjct: 5   GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64

Query: 223 DCVVEARKLF-GEMP-EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
             V +A++LF G  P   D V++N M++    +  + E+++   ++           F++
Sbjct: 65  GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANLSHI 339
            L   +    L +GR++H   I    ++    VA++LVDMYA   +  +A+++F      
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF------ 178

Query: 340 STVP--------WTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELA 390
             VP        W AMI  Y Q G  EEAL LF  M   A     + T AS+L A A   
Sbjct: 179 DMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE 238

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           + +  + +H +V++ G   N F  +AL+DMYA+ G    A + F  +   ++VSWN LI+
Sbjct: 239 AFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLIT 298

Query: 451 ACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
            C   G   DA    +  + + + G  P++++L+++L  C+       G +  +    ++
Sbjct: 299 GCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARG-KEIHGYAVRH 357

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            L       +++VD+  + GC   +  +  ++P   + I W+ +I +  +H
Sbjct: 358 ALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMH 407



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 166/355 (46%), Gaps = 9/355 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD--RTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N+   + L+  Y     +  AR++F+ + D  +    W  +I GY+Q     EA +LF  
Sbjct: 154 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 213

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  + G  P   T A++L  C+  +       VH  ++K G      + N+L+D Y ++ 
Sbjct: 214 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 273

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL---GFKPSDFTFAA 179
             D+ARR+F  +   D VS+N LITG   +G   +A +L  EMQ L   G  P+  T   
Sbjct: 274 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 333

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L     LA  A G+++H + V+     +V V +AL+D+Y+K  C+  +R +F  +P  +
Sbjct: 334 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRN 393

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQI- 297
            +++NV+I  Y  +    E+  LF  +  +   R ++  F   L+  ++   +  G Q+ 
Sbjct: 394 TITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLF 453

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISA 350
           H             +   +VD+  + GR +EA  +  ++         W+ M+ A
Sbjct: 454 HAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 508


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/629 (35%), Positives = 354/629 (56%), Gaps = 33/629 (5%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
           N+L+ +    R +    R+F  MP++D+VS+NALITGF+  G    +++L+   ++    
Sbjct: 83  NALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESV 142

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           +P+  T +A +     L+D ALG  VH  V++  F    FV + L+D+Y+K   + +AR+
Sbjct: 143 RPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARR 202

Query: 231 LFGEMP-------------------------------EVDGVSYNVMITCYAWNEQYKES 259
           +F EM                                + D +++  M+T    N    E+
Sbjct: 203 VFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEA 262

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L +FR ++       Q+ F ++L+       L+ G+QIH     T     V V ++LVDM
Sbjct: 263 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM 322

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KC     A+ +F  ++  + + WTAMI  Y Q    EEA+  F EM    I  D  T 
Sbjct: 323 YSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTL 382

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S++ + A LASL  G Q H   + SG M  +   +AL+ +Y K GS++DA + F EM  
Sbjct: 383 GSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF 442

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            + VSW AL++  AQ G A+ T+  FE M+ +G +PD V+ + VLSACS  GL+E+G  Y
Sbjct: 443 HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F+SM + + + P  +HY  M+D+  RSG F EAE+ + QMP  PD   W+++++SCR+  
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N+E  K AA+ L + +  ++ A YV + +++A  GQW  V+ +++ MR+R V+K    SW
Sbjct: 563 NMEIGKWAAENLLETDP-QNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW 621

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
           ++ K+KVH+F+A+D+ HP ++ I  K+E L  +M +EGYKPD S  LHD  +  KV  + 
Sbjct: 622 IKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRA 708
           +HSE+LAIAF LI  P+  PI ++KNLR 
Sbjct: 682 HHSEKLAIAFGLIFVPQEMPIRIVKNLRG 710



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 250/520 (48%), Gaps = 34/520 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+ N  + N L+S    S  +     LF SM +R AVS+  LI G+S       + +L+
Sbjct: 74  MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             +  +    P  +T + ++   S          VH  +++ G+ +   + + LVD Y K
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193

Query: 121 IRCLDLARRVFKEMPQK-------------------------------DSVSFNALITGF 149
           +  +  ARRVF+EM  K                               DS+++  ++TG 
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            + GL  EA+ +F  M+  G     +TF + L+A   LA +  G+Q+HA++ +T + +NV
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           FV +AL+D+YSK   +  A  +F  M   + +S+  MI  Y  N   +E+++ F E+Q  
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                 F   +++S  AN   L+ G Q H   +V+  +  + V+N+LV +Y KCG  E+A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +S    V WTA+++ Y Q G  +E ++LF +M    +  D  TF  +L A +  
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 390 ASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNA 447
             +  G     S     G +      + ++D+Y++SG  K+A +  K+MP   +   W  
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSA 486
           L+S+C   G+ +    + E+++++  Q P S  LL  + A
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHA 593



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 8/146 (5%)

Query: 379 FASILRASAE---LASLSLGKQLHSFVIRSGFMSN-VFSGSALLDMYAKSGSLKDAIQTF 434
           +A+IL ++A       + +   +H  ++++   +   F  + LL  YAKSG L  A + F
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            EMP+ N+ + NAL+SA A +      +   E +  S  + D+VS  ++++  S  G   
Sbjct: 72  DEMPDPNLFTRNALLSALAHS----RLVPDMERLFASMPERDAVSYNALITGFSSTGSPA 127

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMV 520
             +Q + ++ ++  +RP +   ++M+
Sbjct: 128 RSVQLYRALLREESVRPTRITLSAMI 153



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 29/214 (13%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+F+ +ALL   A S  + D  + F  MPER+ VS+NALI+  +  G    +++ +  ++
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 470 -QSGYQPDSVSL---LSVLSACS--------HCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
            +   +P  ++L   + V SA S        HC ++  G   +  +             +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVG------------S 185

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            +VD+  + G   +A ++  +M  +   +M++++I      K +E AK     LF++   
Sbjct: 186 PLVDMYAKMGLIRDARRVFQEMEAKT-VVMYNTLITGLLRCKMIEDAKG----LFQLMVD 240

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           RD+  +  M       G       V + MR  GV
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/712 (33%), Positives = 391/712 (54%), Gaps = 47/712 (6%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFG-----YNSILIICNSLVDSYCKIRCLDLARRVFK 132
           +L+  CS   +  +L Q HA +I+ G     Y++  +   + + S+     L+ AR+VF 
Sbjct: 36  SLIDRCS---SLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFAS---LEYARKVFD 89

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGLADI 190
           E+PQ +S ++N LI  +A       +I  F++M        P+ +TF   + A   ++ +
Sbjct: 90  EIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSL 149

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +LG+ +H   +K+    +VFVAN+L+  Y     +  A K+F  + E D VS+N MI  +
Sbjct: 150 SLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 209

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                  ++L+LF++++      S      +LS  A   DL+ GR++ +          +
Sbjct: 210 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNL 269

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT------------------------- 345
            +AN+++DMY KCG  E+AK +F  +     V WT                         
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKK 329

Query: 346 ------AMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQL 398
                 A+ISAY Q G   EAL +F E+  + NI  +Q T  S L A A++ +L LG+ +
Sbjct: 330 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 389

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           HS++ ++G   N +  SAL+ MY+K G L+ A + F  + +R++  W+A+I   A +G  
Sbjct: 390 HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCG 449

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              +  F  M ++  +P+ V+  +V  ACSH GL++E    F  M   Y + P+ +HYA 
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC 509

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           +VD+L RSG  ++A K +  MP  P   +W +++ +C+IH NL  A+ A  +L ++E   
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRN 569

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           D A +V +SNIYA +G+W++VS+++K MR  G++K    S +E+   +H F + D  HP 
Sbjct: 570 DGA-HVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 628

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEG 697
           + ++  K+  +M+++K  GY+P+ S  L   E+EE+K +SL  HSE+LAI + LI+T   
Sbjct: 629 SEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 688

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             I V+KNLR C DCHA  KLIS++  REI VRD  RFHHF++G CSC DFW
Sbjct: 689 KAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 225/468 (48%), Gaps = 35/468 (7%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGGSDPDYVTFAT 78
            +L  AR++F+ +    + +W  LI  Y+       +   F+DM  ++    P+  TF  
Sbjct: 79  ASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPF 138

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           L+   +E  + +    +H   IK    S + + NSL+  Y     LD A +VF  + +KD
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N++I GF ++G  ++A++LF +M+    K S  T    LSA   + D+  GR+V +
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCS 258

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK- 257
           ++ +     N+ +ANA+LD+Y+K   + +A++LF  M E D V++  M+  YA +E Y+ 
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318

Query: 258 ------------------------------ESLKLFRELQFTR-FDRSQFPFSTLLSVVA 286
                                         E+L +F ELQ  +    +Q    + LS  A
Sbjct: 319 AREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACA 378

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               L++GR IH+            V ++L+ MY+KCG  E+A+E+F ++       W+A
Sbjct: 379 QVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSA 438

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS- 405
           MI      G   EA+++F +M  AN+  +  TF ++  A +    +   + L   +  S 
Sbjct: 439 MIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSY 498

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
           G +      + ++D+  +SG L+ A++  + MP     S W AL+ AC
Sbjct: 499 GIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 546



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 176/385 (45%), Gaps = 35/385 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y   G+L +A ++F ++ ++  VSW  +I G+ QK    +A +LF  M ++   
Sbjct: 172 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DV 230

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +VT   +LS C++        +V + I +   N  L + N+++D Y K   ++ A+R
Sbjct: 231 KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 290

Query: 130 VF-------------------------------KEMPQKDSVSFNALITGFAKEGLNEEA 158
           +F                                 MP+KD V++NALI+ + + G   EA
Sbjct: 291 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEA 350

Query: 159 IKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           + +F E+Q     K +  T  + LSA   +  + LGR +H+++ K     N +V +AL+ 
Sbjct: 351 LLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIH 410

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   + +AR++F  + + D   ++ MI   A +    E++ +F ++Q      +   
Sbjct: 411 MYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVT 470

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEA-KEIFAN 335
           F+ +    ++   +     +  +   +  I  E K    +VD+  + G  E+A K I A 
Sbjct: 471 FTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530

Query: 336 LSHISTVPWTAMISAYVQKGNLEEA 360
               ST  W A++ A     NL  A
Sbjct: 531 PIPPSTSVWGALLGACKIHANLSLA 555



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 2/193 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ V+   ++ GY  S +   ARE+ N+M  +  V+W  LI  Y Q  +  EA  +F
Sbjct: 295 MEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVF 354

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +++       + +T  + LS C++         +H+ I K G      + ++L+  Y K
Sbjct: 355 HELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSK 414

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ AR VF  + ++D   ++A+I G A  G   EA+ +F +MQ    KP+  TF   
Sbjct: 415 CGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNV 474

Query: 181 LSA--GVGLADIA 191
             A    GL D A
Sbjct: 475 FCACSHTGLVDEA 487


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/682 (34%), Positives = 376/682 (55%), Gaps = 16/682 (2%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+  TF   L  CS     +    +H   I  G  + L +  +L+D Y K  CL  A  +
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIK--LFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F  MP +D V++NA++ G+A  G+   A+   L ++MQ    +P+  T  A L       
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 189 DIALGRQVHAFVV----------KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            +A G  VHA+ +          K+   + V +  ALLD+Y+K   ++ AR++F  MP  
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + V+++ +I  +    +  ++  LF+ +  Q   F  S    ++ L   A+   L++G Q
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMGEQ 246

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H     +   +++   NSL+ MYAK G  ++A  +F  ++   TV ++A++S YVQ G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEA  +F +M   N+  D AT  S++ A + LA+L  G+  H  VI  G  S     +A
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMYAK G +  + Q F  MP R+IVSWN +I+    +G  +     F +M   G+ PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
            V+ + +LSACSH GL+ EG  +F+ M   Y L P+ EHY  MVD+L R G  DEA + +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MP   D  +W +++ +CR++KN++  KK +  + ++        +V +SNIY+ AG++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP-EGTGNFVLLSNIYSAAGRF 545

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           +  ++V+   + +G +K    SW+E+   +H F   D+ HPQ+ EI R+++N++  +KK 
Sbjct: 546 DEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 605

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           GY+PDTS  L D +EE K ++L  HSE+LAIA+ +++  E   I V KNLR C DCH  I
Sbjct: 606 GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVI 665

Query: 717 KLISKITGREITVRDSSRFHHF 738
           K IS +  R I VRD++RFHHF
Sbjct: 666 KHISLVKRRAIIVRDANRFHHF 687



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 216/459 (47%), Gaps = 16/459 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +  L+  YVK   L  A  +F +M  R  V+W  ++ GY+    +  A    + M+    
Sbjct: 48  STALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH 107

Query: 69  S-DPDYVTFATLLSGCSEPDTANELIQVHADII----------KFGYNSILIICNSLVDS 117
              P+  T   LL   ++     +   VHA  I          K      +++  +L+D 
Sbjct: 108 RLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDM 167

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDF 175
           Y K   L  ARRVF  MP ++ V+++ALI GF       +A  LF  M  Q L F  S  
Sbjct: 168 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL-SPT 226

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           + A+AL A   L  + +G Q+HA + K+    ++   N+LL +Y+K   + +A  LF EM
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VSY+ +++ Y  N + +E+  +F+++Q    +       +L+   ++   LQ GR
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
             H   I+    SE  + N+L+DMYAKCGR + ++++F  +     V W  MI+ Y   G
Sbjct: 347 CSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 406

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSG 414
             +EA  LF+EM       D  TF  +L A +    +  GK   H      G    +   
Sbjct: 407 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 466

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
             ++D+ ++ G L +A +  + MP R ++  W AL+ AC
Sbjct: 467 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 505



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 223/495 (45%), Gaps = 48/495 (9%)

Query: 2   PNQNTVST--------NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQF 53
           PN+N+ S           L+  Y K G+L  AR +F++M  R  V+W+ LIGG+   ++ 
Sbjct: 146 PNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM 205

Query: 54  REAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNS 113
            +AF LF  M   G       + A+ L  C+  D      Q+HA + K G ++ L   NS
Sbjct: 206 TQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS 265

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           L+  Y K   +D A  +F EM  KD+VS++AL++G+ + G  EEA  +F +MQ    +P 
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
             T  + + A   LA +  GR  H  V+         + NAL+D+Y+K   +  +R++F 
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN 385

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQ 292
            MP  D VS+N MI  Y  +   KE+  LF E+    F      F  LLS  ++  L ++
Sbjct: 386 MMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
                H           ++    +VD+ ++ G  +EA E       I ++P  A +  +V
Sbjct: 446 GKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF------IQSMPLRADVRVWV 499

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
                       +  CR   + D     S  R   EL     G    +FV+    +SN++
Sbjct: 500 A----------LLGACRVYKNIDLGKKVS--RMIQELGPEGTG----NFVL----LSNIY 539

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE------ 466
           S +   D  A+   ++  +Q FK+ P  + +  N  + A    G  Q+  +S E      
Sbjct: 540 SAAGRFDEAAEVRIIQK-VQGFKKSPGCSWIEINGSLHAFV--GGDQSHPQSPEIYRELD 596

Query: 467 ----DMVQSGYQPDS 477
                + + GYQPD+
Sbjct: 597 NILVGIKKLGYQPDT 611



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 16/201 (7%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M R  ++ +  TF   L+A + LA    G+ +H   I +G  +++F  +ALLDMY K   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSV 483
           L DA   F  MP R++V+WNA+++  A +G    A A L S + M     +P++ +L+++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ-MQMHRLRPNASTLVAL 119

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA----------SMVDILCRSGCFDEAE 533
           L   +  G + +G    ++   +  L P +   +          +++D+  + G    A 
Sbjct: 120 LPLLAQQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 534 KLMAQMPFEPDEIMWSSVINS 554
           ++   MP   +E+ WS++I  
Sbjct: 179 RVFDAMPAR-NEVTWSALIGG 198


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/558 (38%), Positives = 344/558 (61%), Gaps = 2/558 (0%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P+   + A ++A     ++   R++HA +  + F  + F+ N+L+ LY K   VVEA K+
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F +M   D VS+  +I  YA N+   E++ L   +   RF  + F F++LL  V    D 
Sbjct: 109 FDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
            IG QIH   +      +V V ++L+DMYA+CG+ + A  +F  L   + V W A+IS +
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            +KG+ E AL +F EM R    A   T++SI  A A + +L  GK +H+ +I+S      
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTA 288

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           F G+ +LDMYAKSGS+ DA + F+ +  +++V+WN++++A AQ G  +  +  FE+M +S
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G   + +S L +L+ACSH GL++EG  YF+ M ++Y L P+ EHY ++VD+L R+G  + 
Sbjct: 349 GIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +MP EP   +W +++ +CR+HKN +  + AAD +F+++   D+ P V + NIYA
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP-DDSGPPVLLYNIYA 466

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
             G W++ ++V+K M+  GV+K  A SWVE+++ VH+F AND+ HP+  EI +  + +  
Sbjct: 467 STGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISM 526

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           +++KEGY PD    L   DE+ +  +L+YHSE++A+AFALI  P G+ I +MKN+R C D
Sbjct: 527 KIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGD 586

Query: 712 CHAAIKLISKITGREITV 729
           CH+A K ISK+  REI +
Sbjct: 587 CHSAFKYISKVFEREIVI 604



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 210/400 (52%), Gaps = 1/400 (0%)

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +D    G   P    +   ++ C++    ++  ++HA +    +     + NSL+  YCK
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A +VF +M  KD VS+ +LI G+A+  +  EAI L   M    FKP+ FTFA+ 
Sbjct: 99  CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A    AD  +G Q+HA  VK ++ E+V+V +ALLD+Y++   +  A  +F ++   +G
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I+ +A     + +L +F E+Q   F+ + F +S++ S +A    L+ G+ +H  
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAH 278

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +       V N+++DMYAK G   +A+++F  + +   V W +M++A+ Q G  +EA
Sbjct: 279 MIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           ++ F EM ++ I  +Q +F  IL A +    +  GK     +        +     ++D+
Sbjct: 339 VSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDL 398

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
             ++G L  A+    +MP E     W AL++AC  + +A+
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 183/342 (53%), Gaps = 2/342 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G++  A ++F+ M ++  VSWT LI GY+Q +   EA  L   M   G  
Sbjct: 90  NSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGM-LKGRF 148

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TFA+LL        +    Q+HA  +K  ++  + + ++L+D Y +   +D+A  
Sbjct: 149 KPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATA 208

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF ++  K+ VS+NALI+GFA++G  E A+ +F EMQ  GF+ + FT+++  SA  G+  
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGA 268

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+ VHA ++K+      FV N +LD+Y+K   +++ARK+F  +   D V++N M+T 
Sbjct: 269 LEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A     KE++  F E++ +    +Q  F  +L+  ++   ++ G+             E
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPE 388

Query: 310 VKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISA 350
           ++   ++VD+  + G    A   IF      +   W A+++A
Sbjct: 389 IEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/575 (37%), Positives = 339/575 (58%), Gaps = 5/575 (0%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT    L A   L D+   R +   + K     NV   N L+    K+  +  AR+LF +
Sbjct: 78  FTTNNLLLAYADLGDLPTARHLFEGISK----RNVMSWNILIGGCIKNGDLGSARELFDK 133

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  +  ++N M+         ++SL+ F  ++       +F   ++    A  LD+  G
Sbjct: 134 MPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSG 193

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H   + +   S++ V NSL  MY +CG   E + +   L  ++ V +   I+   Q 
Sbjct: 194 RQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQN 253

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ E AL  F  M    ++ D  TF S +   ++LA+L+ G+Q+H+ VI++G    V   
Sbjct: 254 GDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVI 313

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++L+ MY++ G L D+ + +      ++   +A+ISAC  +G     ++ F+ M+  G +
Sbjct: 314 TSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAE 373

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ V+ L++L ACSH GL +EGL++F  MT+ Y  +P  +HY  +VD+L RSGC DEAE 
Sbjct: 374 PNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEA 433

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           L+  MP   D ++W +++++C+  KN + A++ A+++ + +  RD+APYV +SNI A + 
Sbjct: 434 LILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDP-RDSAPYVLLSNIRATSK 492

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W  V++V+K MRE+ +RK    SWVE K +VH F   D+ HP+  EI   ++ +M +++
Sbjct: 493 RWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGKIR 552

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + GY PD +   HD ++E K  SL +HSE+LAIAFA +N PEG PI VMKNLR C DCH 
Sbjct: 553 QCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHV 612

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AIKLIS++TGREI VRD SRFHHF+DG CSC D+W
Sbjct: 613 AIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 2/343 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N L+    K   L  AR +F +MP ++  ++NA++ G    GL+E++++ F+ M+  G  
Sbjct: 112 NILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMH 171

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P +F   +      GL D+  GRQVHA+VV++    ++ V N+L  +Y +  C+ E   +
Sbjct: 172 PDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAV 231

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
              +P +  VS+N  I     N   + +L+ F  ++          F + +S  ++   L
Sbjct: 232 LRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAAL 291

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G+Q+H Q I       V V  SLV MY++CG   +++ ++     +     +AMISA 
Sbjct: 292 AQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISAC 351

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G   +A+ LF +M       ++ TF ++L A +       G +    + ++ GF  +
Sbjct: 352 GFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPS 411

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
           V   + ++D+  +SG L +A      MP R + V W  L+SAC
Sbjct: 412 VKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSAC 454



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N +S N+LI G +K+G+L +ARELF+ M  R   +W  ++ G +      ++ + F+ M
Sbjct: 106 RNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAM 165

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R + G  PD     ++   C+         QVHA +++ G +S + + NSL   Y +  C
Sbjct: 166 RRE-GMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGC 224

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L     V + +P    VSFN  I G  + G +E A++ F  M+ +   P   TF +A+S 
Sbjct: 225 LAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISC 284

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              LA +A G+QVHA V+K    + V V  +L+ +YS+  C+ ++ +++     +D    
Sbjct: 285 CSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLL 344

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI+   ++ Q  ++++LF+++     + ++  F  LL   ++      G +       
Sbjct: 345 SAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTK 404

Query: 304 TTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           T      VK  N +VD+  + G  +EA+ +  ++      V W  ++SA   + N + A
Sbjct: 405 TYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMA 463



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 37/319 (11%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H     + A ++    N+L+  YA  G    A+ +F  +S  + + W  +I   ++ 
Sbjct: 62  RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKN 121

Query: 355 GNL-------------------------------EEALNLFIEMCRANISADQATFASIL 383
           G+L                               E++L  F+ M R  +  D+    S+ 
Sbjct: 122 GDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVF 181

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R  A L  +  G+Q+H++V+RSG  S++  G++L  MY + G L +     + +P   IV
Sbjct: 182 RCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIV 241

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           S+N  I+   QNGD++  L+ F  M      PD V+ +S +S CS    + +G Q  ++ 
Sbjct: 242 SFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQG-QQVHAQ 300

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
             K  +        S+V +  R GC  ++E++        D  + S++I++C  H     
Sbjct: 301 VIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGY-CGLDLFLLSAMISACGFHGQ--- 356

Query: 564 AKKAADQLFKMEKLRDAAP 582
               A +LFK      A P
Sbjct: 357 -GHKAVELFKQMMNGGAEP 374



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 12/173 (6%)

Query: 336 LSHISTVPWTAM--ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
           L  +ST P  A          G L++AL+      R  + +D + F+ I RA     ++ 
Sbjct: 6   LKRVSTGPREAKDEFIRLCSSGRLKDALH---HPFRGVLWSDASLFSHIFRACR---AIP 59

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
           L +QLH+F   SG  ++ F+ + LL  YA  G L  A   F+ + +RN++SWN LI  C 
Sbjct: 60  LLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCI 119

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           +NGD  +  + F+ M       +  +  ++++  ++ GL E+ LQ+F +M ++
Sbjct: 120 KNGDLGSARELFDKMPTR----NVATWNAMVAGLTNVGLDEDSLQFFLAMRRE 168


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/668 (34%), Positives = 375/668 (56%), Gaps = 2/668 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+ + L+  Y K   L  +  +F+ + ++  VSW+ +I G  Q ++  E  +LF +M+
Sbjct: 215 DVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQ 274

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G      + +A+L   C+         ++H+  +K  + S +I+  + +D Y K   +
Sbjct: 275 GVGVGVSQSI-YASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRM 333

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A++V   MP+    S+NA+I G+A+     +A+K F  +   G    + T + AL+A 
Sbjct: 334 ADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNAC 393

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +     GRQVH   VK+  + N+ VANA+LD+Y K   + EA  LF  M   D VS+N
Sbjct: 394 ASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWN 453

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I     N   +E+L  F  +  +R +   F + ++L   A +  L  G +IHT+ I +
Sbjct: 454 AIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKS 513

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               +  V  +LVDMY KCG  E+A +I       + V W A+IS +      E+A   F
Sbjct: 514 GMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFF 573

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    ++ D  T+A++L   A LA++ LGKQ+H+ +I+    S+V+  S L+DMY+K 
Sbjct: 574 SRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKC 633

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G+++D+   F++ P R+ V+WNA++   A +G  +  LK FE M     +P+  + +SVL
Sbjct: 634 GNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVL 693

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
            AC+H GL+++GL YF+ M  +Y L P+ EHY+ MVDIL RSG  DEA  L+ +MPFE D
Sbjct: 694 RACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEAD 753

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W ++++ C+IH N+E A+KA   L +++  +D++  V +SNIYA AG W +VS+++K
Sbjct: 754 AVIWRNLLSVCKIHGNVEVAEKATRALLQLDP-QDSSACVLLSNIYADAGMWGNVSEMRK 812

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            MR   ++K    SW+ELK +VH F   D+ HP+  EI  K+  L+ EM+  GY PD   
Sbjct: 813 MMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDV 872

Query: 665 ALHDEDEE 672
            L +E EE
Sbjct: 873 LLDEEVEE 880



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 175/580 (30%), Positives = 316/580 (54%), Gaps = 9/580 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS N +ISGY   G +  AR+ F  M +R  VSW  +I G+ Q  + R++  +F++M
Sbjct: 113 RDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEM 172

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G   D  + A +L  C   +  +  +QVH  ++KFG++  ++  ++L+  Y K + 
Sbjct: 173 GR-CGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD +  VF E+P+K+ VS++A+I G  +   N E ++LF EMQ +G   S   +A+   +
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L+ + LG+++H+  +K+ F  ++ V  A LD+Y+K   + +A+K+   MP+    SY
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTI 302
           N +I  YA +++  ++LK F+ L  T     +   S  L+  A+ + DL+ GRQ+H   +
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGLAV 410

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            + ++S + VAN+++DMY KC    EA ++F  +     V W A+I+A  Q GN EE L 
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            F  M  + +  D  T+ S+L+A A   +L+ G ++H+ +I+SG   + F G+AL+DMY 
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC 530

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A +      ++ +VSWNA+IS  +    ++   K F  M++ G  PD+ +  +
Sbjct: 531 KCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAA 590

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL  C++   +  G Q  ++   K +L+      +++VD+  + G   +++ +  + P  
Sbjct: 591 VLDTCANLATVGLGKQ-IHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-N 648

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            D + W++++     H   E A K    LF+  +L +  P
Sbjct: 649 RDFVTWNAMLCGYAHHGLGEEALK----LFESMQLVNVKP 684



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 279/588 (47%), Gaps = 66/588 (11%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ +   CS+ ++ N   Q HA +I  G+     + N L+  Y K   LD A +VF +M
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 135 PQKDSVSFNALITGFA-------------------------------KEGLNEEAIKLFV 163
             +D VS+N++I+G+A                               + G   ++I +F+
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
           EM   G      + A  L A   L +  +G QVH  VVK  F  +V   +ALL +Y+K  
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            + ++  +F E+PE + VS++ MI     N++  E L+LF+E+Q      SQ  +++L  
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             A    L++G+++H+  + +   S++ V  + +DMYAKCGR  +A+++ +++   S   
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           + A+I  Y +     +AL  F  + +  +  D+ T +  L A A +     G+Q+H   +
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           +S  MSN+   +A+LDMY K  +L +A   F  M  R+ VSWNA+I+AC QNG+ + TL 
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F  M+ S  +PD  +  SVL AC+    +  G++    +  K  +       A++VD+ 
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRII-KSGMGFDSFVGAALVDMY 529

Query: 524 CRSGCFDEAEKL----------------------------------MAQMPFEPDEIMWS 549
           C+ G  ++A+K+                                  M +M   PD   ++
Sbjct: 530 CKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYA 589

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +V+++C     +   K+   Q+ K E   D      + ++Y+  G  +
Sbjct: 590 AVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQ 637


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/658 (35%), Positives = 364/658 (55%), Gaps = 4/658 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N +++ Y K G+L  AR+ F++M  R  VSWTI+I GYSQ  Q  +A  +++ M 
Sbjct: 191 DLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQM- 249

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD +TF +++  C      +   Q+H  +IK GY+  LI  N+L+  Y +   +
Sbjct: 250 LQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQI 309

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF-KPSDFTFAAALSA 183
             A  VF  +  KD +S+ ++ITGF + G   EA+ LF +M   GF +P++F F +  SA
Sbjct: 310 VHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSA 369

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L +   GRQ+H    K     NVF   +L D+Y+K   +  A + F ++   D VS+
Sbjct: 370 CRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSW 429

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  ++ +    E++  F ++  T        F +LL    + + +  G QIH+  I 
Sbjct: 430 NAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIK 489

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALN 362
                E  V NSL+ MY KC    +A  +F ++S + + V W A++SA +Q     E   
Sbjct: 490 IGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFR 549

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF  M  +    D  T  +IL   AELASL +G Q+H F ++SG + +V   + L+DMYA
Sbjct: 550 LFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYA 609

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GSLK A   F      +IVSW++LI   AQ G     L  F  M   G QP+ V+ L 
Sbjct: 610 KCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLG 669

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG  ++N+M  +  + P +EH + MVD+L R+GC  EAE  + +M F 
Sbjct: 670 VLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFN 729

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD  MW +++ SC+ H N++ A++AA+ + K++    AA  V +SNI+A  G W+ V+++
Sbjct: 730 PDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAA-LVLLSNIHASVGNWKEVARL 788

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +  M++ GV+KV   SW+ +K ++HVF + D  H Q  +I   +E+L  +M  +GY P
Sbjct: 789 RNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 251/506 (49%), Gaps = 4/506 (0%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           ++  +REA   F     +     +  T+  L+  C+   +     ++H  I+K      L
Sbjct: 133 KQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDL 192

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           ++ N +++ Y K   L  AR+ F  M  ++ VS+  +I+G+++ G   +AI ++++M   
Sbjct: 193 VLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQS 252

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G+ P   TF + + A     DI LGRQ+H  V+K+ +  ++   NAL+ +Y++   +V A
Sbjct: 253 GYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHA 312

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF-DRSQFPFSTLLSVVAN 287
             +F  +   D +S+  MIT +       E+L LFR++    F   ++F F ++ S   +
Sbjct: 313 SDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRS 372

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            L+ + GRQIH           V    SL DMYAK G    A   F  +     V W A+
Sbjct: 373 LLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAI 432

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+A+   G++ EA+  F +M    +  D  TF S+L A     +++ G Q+HS++I+ G 
Sbjct: 433 IAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGL 492

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFE 466
                  ++LL MY K  +L DA   FK++ E  N+VSWNA++SAC Q+  A    + F+
Sbjct: 493 DKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFK 552

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M+ S  +PD++++ ++L  C+    +E G Q  +  + K  L         ++D+  + 
Sbjct: 553 LMLFSENKPDNITITTILGTCAELASLEVGNQ-VHCFSVKSGLVVDVSVSNRLIDMYAKC 611

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G    A  +       PD + WSS+I
Sbjct: 612 GSLKHARDVFGSTQ-NPDIVSWSSLI 636



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 245/489 (50%), Gaps = 11/489 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + ++ N LIS Y + G +  A ++F  +  +  +SW  +I G++Q     EA  LF D
Sbjct: 290 DHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRD 349

Query: 63  MRTDGGSDPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           M   G   P+   F ++ S C    EP+      Q+H    KFG    +    SL D Y 
Sbjct: 350 MFRQGFYQPNEFIFGSVFSACRSLLEPEFGR---QIHGMCAKFGLGRNVFAGCSLCDMYA 406

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   L  A R F ++   D VS+NA+I  F+  G   EAI  F +M H G  P   TF +
Sbjct: 407 KFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLS 466

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE-V 238
            L A      I  G Q+H++++K    +   V N+LL +Y+K   + +A  +F ++ E  
Sbjct: 467 LLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENA 526

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
           + VS+N +++    ++Q  E  +LF+ + F+         +T+L   A    L++G Q+H
Sbjct: 527 NLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVH 586

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
             ++ +  + +V V+N L+DMYAKCG  + A+++F +  +   V W+++I  Y Q G   
Sbjct: 587 CFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGH 646

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFSGSAL 417
           EALNLF  M    +  ++ T+  +L A + +  +  G   ++ + I  G        S +
Sbjct: 647 EALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCM 706

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +D+ A++G L +A    K+M    +I  W  L+++C  +G+     ++ E++++    P 
Sbjct: 707 VDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILK--LDPS 764

Query: 477 SVSLLSVLS 485
           + + L +LS
Sbjct: 765 NSAALVLLS 773



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 241 VSYNVMITCYAWNEQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           +S N  I        Y+E+L  F    + +        +  L+    +   L+ G++IH 
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             + +    ++ + N +++MY KCG  ++A++ F  +   + V WT MIS Y Q G   +
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ ++I+M ++    D  TF SI++A      + LG+QLH  VI+SG+  ++ + +AL+ 
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALIS 301

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSV 478
           MY + G +  A   F  +  ++++SW ++I+   Q G     L  F DM + G YQP+  
Sbjct: 302 MYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEF 361

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
              SV SAC      E G Q  + M  K+ L        S+ D+  + G    A +   Q
Sbjct: 362 IFGSVFSACRSLLEPEFGRQ-IHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQ 420

Query: 539 MPFEPDEIMWSSVI 552
           +   PD + W+++I
Sbjct: 421 IE-SPDLVSWNAII 433


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 393/686 (57%), Gaps = 14/686 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +  LL  C +  + +E   VH  ++K G +    + + LV+ Y K   ++ ARRVF  M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +++ V++  L+ GF +    + AI +F EM + G  PS +T +A L A   L  + LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
            HA+++K +   +  V +AL  LYSK   + +A K F  + E + +S+   ++  A N  
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             + L+LF E+       ++F  ++ LS     L L++G Q+++  I     S ++V NS
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNLE------EALNLF 364
           L+ +Y K G   EA  +F  +   S V W AMI+ + Q     K NL       EAL LF
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            ++  + +  D  T +S+L   + + ++  G+Q+H+  I++GF+S+V   ++L+ MY+K 
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC 429

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS++ A + F EM  R +++W ++I+  +Q+G +Q  L  FEDM  +G +P++V+ + VL
Sbjct: 430 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVL 489

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACSH G++ + L YF  M +KYK++P  +HY  MVD+  R G  ++A   + +M +EP 
Sbjct: 490 SACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 549

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           E +WS+ I  C+ H NLE    AA+QL  + K +D   YV + N+Y  A ++E VS+V+K
Sbjct: 550 EFIWSNFIAGCKSHGNLELGFYAAEQLLSL-KPKDPETYVLLLNMYLSAERFEDVSRVRK 608

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M E  V K+  +SW+ +K KV+ F  N + HPQ++ I + +E+L+ ++K  GY+   S 
Sbjct: 609 MMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESV 668

Query: 665 ALHDEDEEIKVESLK--YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
            + DE+EE +  S    YHSE+LAI F L N P  SPI V+K+   C D H  IK +S +
Sbjct: 669 EISDEEEEEEKTSSPNIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTL 728

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDF 748
            GREI V+DS R H F +G CSC +F
Sbjct: 729 AGREIIVKDSKRLHKFANGECSCGNF 754



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 253/482 (52%), Gaps = 18/482 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L++ Y K GN+  AR +F++M+ R  V+WT L+ G+ Q +Q + A  +F +
Sbjct: 99  HDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQE 158

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    GS P   T + +L  CS   +     Q HA IIK+  +    + ++L   Y K  
Sbjct: 159 MLY-AGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCG 217

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A + F  + +K+ +S+ + ++  A  G   + ++LFVEM  +  KP++FT  +ALS
Sbjct: 218 RLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALS 277

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               +  + LG QV++  +K  +  N+ V N+LL LY K  C+VEA +LF  M +   V+
Sbjct: 278 QCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVT 337

Query: 243 YNVMITCYAWNEQY-----------KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           +N MI  +A   +             E+LKLF +L  +      F  S++LSV +  L +
Sbjct: 338 WNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAI 397

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           + G QIH QTI T  +S+V V+ SL+ MY+KCG  E A + F  +S  + + WT+MI+ +
Sbjct: 398 EQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGF 457

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI---RSGFM 408
            Q G  ++AL++F +M  A +  +  TF  +L A +    +S  + L+ F I   +    
Sbjct: 458 SQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVS--QALNYFEIMQKKYKIK 515

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
             +     ++DM+ + G L+ A+   K+M  E +   W+  I+ C  +G+ +    + E 
Sbjct: 516 PAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQ 575

Query: 468 MV 469
           ++
Sbjct: 576 LL 577


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/749 (33%), Positives = 404/749 (53%), Gaps = 15/749 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G + +A E+F+ +     + W   I   +  ++  +   L V      G  P
Sbjct: 176 LLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLP 235

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  +F  +LS C +  +      +HA + + G+   +++  +LV  Y +   +D +  VF
Sbjct: 236 NRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVF 295

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + M  ++ VS+NA+I  FA+ G    A  ++  MQ  GF+P+  TF  AL A    +   
Sbjct: 296 EAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 355

Query: 192 LGRQ--VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           LG    +H ++       +V V  AL+ +Y     +  AR  F  +P  + VS+N M+T 
Sbjct: 356 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 415

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
           Y  N + +E+++LF  ++      ++  +   L+V+    D+   R IH + +     + 
Sbjct: 416 YGDNGRAREAMELFAAMKRQSLAPNKVSY---LAVLGCCEDVSEARSIHAEVVGNGLFAQ 472

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           E  +AN +V M+A+ G  EEA   F       +V W   ++A   + +L  A+  F  M 
Sbjct: 473 ESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQ 532

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSL 427
                 D+ T  S++   A+L +L LG+ +   +  +     +V   SA+++M AK GS 
Sbjct: 533 HEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSS 592

Query: 428 KDAIQT-FKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
            D  +  F  MP+  +++V+WN +I+A AQ+G  +  LK F  M Q S  +PDS + +SV
Sbjct: 593 VDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSV 652

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           LS CSH GL+E+G+  F    +   +  +  EHYA +VD+L R G   EAE  + +MP  
Sbjct: 653 LSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLP 712

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D ++W+S++ +C  + +LE  ++AA    ++ +  D+  YV +SNIYA AG+WE   +V
Sbjct: 713 ADSVVWTSLLGACSSYGDLEGGERAARAFIELYR-SDSVGYVVLSNIYAAAGRWEDSIRV 771

Query: 603 KKAMRERGVRK-VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           ++ M ER V+K V   S + +K++VH F A D  HPQ++ I  ++E L   +++ GY PD
Sbjct: 772 REDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPD 831

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           T   LHD +EE K + L YHSE+LAIAF LI+ P    I V+KNLR C DCH A K I++
Sbjct: 832 TRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIAR 891

Query: 722 ITGREITVRDSSRFHHF-KDGFCSCRDFW 749
           +T REI VRD +RFHHF KDG CSC D+W
Sbjct: 892 VTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 247/578 (42%), Gaps = 62/578 (10%)

Query: 72  DYV---TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           DY+   T A LL  C       +  Q+H  I+K G     ++ N LV  Y K R LD A 
Sbjct: 20  DYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDAN 79

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM---QHLGFKPSDFTFAAALSAGV 185
             F  +  +   ++N LI   A +        L+  M   +    +P+  T  A L A +
Sbjct: 80  AAFSALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGA-I 135

Query: 186 GLAD-----------IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
              D           IA  R VH  +  ++   ++FVA ALLD Y K  CV  A ++F  
Sbjct: 136 ASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSR 195

Query: 235 MPEVDGVSYNVMI-TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
           +   D + +N  I  C   +E+   +L L R +       ++  F  +LS   +   L +
Sbjct: 196 IQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPL 255

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
            R IH +      + +V VA +LV MY +CG  +E+  +F  ++  + V W AMI+A+ Q
Sbjct: 256 ARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ 315

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ--LHSFVIRSGFMSNV 411
            G+   A  ++  M +     ++ TF + L+A+   +S  LG+   LH ++  +G   +V
Sbjct: 316 CGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDV 375

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
             G+AL+ MY  +G++  A   F  +P +NIVSWNA+++A   NG A+  ++ F  M + 
Sbjct: 376 MVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQ 435

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
              P+ VS L+VL  C     + E       +        +      +V +  RSG  +E
Sbjct: 436 SLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEE 492

Query: 532 A-------------------------EKL---------MAQMPFEPDEIMWSSVINSCRI 557
           A                         E L         M    F PD+    SV++ C  
Sbjct: 493 AVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCAD 552

Query: 558 HKNLEFAKKAADQL-FKMEKLRDAAPYVAMSNIYAVAG 594
              LE  +    QL   +E  RD     A+ N+ A  G
Sbjct: 553 LGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCG 590



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 63/337 (18%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q +   N ++  + +SG+L  A   F++ V + +VSW   +   S +     A   F  M
Sbjct: 472 QESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTM 531

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDT----------ANELIQVHAD-IIKFGYNSILIICN 112
           + + G  PD  T  +++  C++  T           +  I+V  D ++     +++  C 
Sbjct: 532 QHE-GFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCG 590

Query: 113 SLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-G 169
           S VD  C+        R+F  MP  +KD V++N +I  +A+ G   +A+KLF  MQ    
Sbjct: 591 SSVDE-CE--------RLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSS 641

Query: 170 FKPSDFTFAAALS----AGVG--------LADIALG----------------------RQ 195
            +P   TF + LS    AG+         LA   LG                      R+
Sbjct: 642 VRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLRE 701

Query: 196 VHAFVVKTNFVENVFVANALLDL---YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
              F+ K     +  V  +LL     Y   +    A + F E+   D V Y V+   YA 
Sbjct: 702 AEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAA 761

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
             ++++S+++ RE    R  + + P  + + VV N++
Sbjct: 762 AGRWEDSIRV-REDMAERRVKKRVPGKSSI-VVKNRV 796


>gi|414592000|tpg|DAA42571.1| TPA: hypothetical protein ZEAMMB73_154468 [Zea mays]
          Length = 872

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 261/801 (32%), Positives = 417/801 (52%), Gaps = 59/801 (7%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF---- 57
           P+ +  + N ++  Y++ G L  AR++F+ M  R A S++ LI GY++      +     
Sbjct: 72  PSSDARTANAVMCAYLRVGRLGDARDVFDWMPARDAASYSALISGYARLAGGSGSVTATV 131

Query: 58  ---KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
              +L   MR   G  P   TF  L + C+         QVHA   K G++S+L++ N++
Sbjct: 132 ASAELLGRMRLADGLLPTEYTFVGLFTACARRGNPRLGTQVHALAAKSGHSSLLLVANAI 191

Query: 115 VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
           +  Y K      A R F  M ++D  S+NA++ G  + G ++EA ++F EM+  G   +D
Sbjct: 192 LGMYVKCGRFGDAMRAFDGMDRRDVSSWNAVLAGLVELGRHDEAFEMFGEMRASGNVRAD 251

Query: 175 -FTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE----- 227
            F+ +A L+A G G+  +  G  VHA   K+    ++ V NAL+  Y++H   VE     
Sbjct: 252 RFSLSALLTAAGEGVGQLQ-GEAVHALSFKSGLETDLSVGNALIGFYAEHGASVEDVVSV 310

Query: 228 ---------------------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKES- 259
                                      A  +F  MP+ + V+YN ++T +  N++   + 
Sbjct: 311 FQRMPVKDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCRNKEGVRAT 370

Query: 260 ---------LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                    L LFR++     + S    + +L+  A   D ++  Q+H   I    +S  
Sbjct: 371 FAKKAGLRGLGLFRQMVEDGLEISDVTVTGVLNACAIAADRKVSEQVHAFVIKCGCVSSP 430

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHIST--VPWTAMISAYVQKGNLEEALNLFIEMC 368
               +L+DM  KCGR  +A  +F    H  +  + W +++ A V+ G  E+AL+ F++M 
Sbjct: 431 WSDAALIDMCIKCGRSGDAHLLFEQWQHEESFHIAWNSLLLASVRGGEYEKALSTFLQMF 490

Query: 369 RANISA--DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           R++ +   D+    S+L     L    LGKQ+H+F  +SG +S    G+A++ MY K G 
Sbjct: 491 RSSGAEFIDEFMLTSVLGVCGSLGFAELGKQMHTFAAKSGLLSARGVGNAIISMYGKCGE 550

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           LKDAI  F+ M  R++VSWNA+I+A          LK + +M +S  +PDS++ L V+SA
Sbjct: 551 LKDAISLFERMSCRDLVSWNAMITAHLLLHQGDDILKIWSEMERSMVRPDSITFLLVISA 610

Query: 487 CSHCGL--IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           CSH      ++  + F SM   Y + P  EHYA+ V +L   G FDEAE+L+  MP +P 
Sbjct: 611 CSHTSSDSTDKCRKLFLSMPSTYGIEPAMEHYAAFVYVLGCWGRFDEAEQLIGGMPLQPG 670

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W S+++SC  H N+   ++A   L  +E  +D + YV  SN+ + + +W S    + 
Sbjct: 671 ALVWRSLLDSCSKHSNMAVRRRAMKHLLALEP-QDPSTYVLTSNLLSESARWRSSENTRL 729

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M E+G+RK+ A SW    + VH F A D+ HPQ+ +I   ++ L+ E  K GY+PDT+ 
Sbjct: 730 EMYEKGMRKIPARSWTFHGNMVHSFFARDKSHPQSRDIYAGLDVLILECIKAGYEPDTTF 789

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD +E  K   L YHS +LA  + L+    G  I V+KN+R C DCH+ ++  S  TG
Sbjct: 790 VLHDVEEYQKRHFLMYHSMKLASMYGLLMAGPGQTIRVVKNIRMCGDCHSFLEHASAATG 849

Query: 725 REITVRDSSRFHHFKDGFCSC 745
           + I+VRDSS FH F+ G CSC
Sbjct: 850 KVISVRDSSGFHIFRGGKCSC 870



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 22/161 (13%)

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ----NGDAQAT 461
           G  S+  + +A++  Y + G L DA   F  MP R+  S++ALIS  A+    +G   AT
Sbjct: 71  GPSSDARTANAVMCAYLRVGRLGDARDVFDWMPARDAASYSALISGYARLAGGSGSVTAT 130

Query: 462 LKSFEDM----VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           + S E +    +  G  P   + + + +AC+  G    G       TQ + L  K  H +
Sbjct: 131 VASAELLGRMRLADGLLPTEYTFVGLFTACARRGNPRLG-------TQVHALAAKSGHSS 183

Query: 518 ------SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                 +++ +  + G F +A +    M    D   W++V+
Sbjct: 184 LLLVANAILGMYVKCGRFGDAMRAFDGMD-RRDVSSWNAVL 223


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/749 (33%), Positives = 404/749 (53%), Gaps = 15/749 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G + +A E+F+ +     + W   I   +  ++  +   L V      G  P
Sbjct: 172 LLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLP 231

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  +F  +LS C +  +      +HA + + G+   +++  +LV  Y +   +D +  VF
Sbjct: 232 NRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVF 291

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + M  ++ VS+NA+I  FA+ G    A  ++  MQ  GF+P+  TF  AL A    +   
Sbjct: 292 EAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 351

Query: 192 LGRQ--VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           LG    +H ++       +V V  AL+ +Y     +  AR  F  +P  + VS+N M+T 
Sbjct: 352 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 411

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
           Y  N + +E+++LF  ++      ++  +   L+V+    D+   R IH + +     + 
Sbjct: 412 YGDNGRAREAMELFAAMKRQSLAPNKVSY---LAVLGCCEDVSEARSIHAEVVGNGLFAQ 468

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           E  +AN +V M+A+ G  EEA   F       +V W   ++A   + +L  A+  F  M 
Sbjct: 469 ESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQ 528

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSL 427
                 D+ T  S++   A+L +L LG+ +   +  +     +V   SA+++M AK GS 
Sbjct: 529 HEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSS 588

Query: 428 KDAIQT-FKEMPE--RNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
            D  +  F  MP+  +++V+WN +I+A AQ+G  +  LK F  M Q S  +PDS + +SV
Sbjct: 589 VDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSV 648

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           LS CSH GL+E+G+  F    +   +  +  EHYA +VD+L R G   EAE  + +MP  
Sbjct: 649 LSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLP 708

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D ++W+S++ +C  + +LE  ++AA    ++ +  D+  YV +SNIYA AG+WE   +V
Sbjct: 709 ADSVVWTSLLGACSSYGDLEGGERAARAFIELYR-SDSVGYVVLSNIYAAAGRWEDSIRV 767

Query: 603 KKAMRERGVRK-VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           ++ M ER V+K     S + +K++VH F A D  HPQ++EI  ++E L   +++ GY PD
Sbjct: 768 REDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPD 827

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
           T   LHD +EE K + L YHSE+LAIAF LI+ P    I V+KNLR C DCH A K I++
Sbjct: 828 TRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIAR 887

Query: 722 ITGREITVRDSSRFHHF-KDGFCSCRDFW 749
           +T REI VRD +RFHHF KDG CSC D+W
Sbjct: 888 VTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/589 (24%), Positives = 277/589 (47%), Gaps = 24/589 (4%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N +  N L+  Y K  +L  A   F+++  R   +W  LI   S        F L+  M
Sbjct: 57  RNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAV---FDLYTRM 113

Query: 64  RTDGGSD--PDYVTFATLLSGCSEPDTANELIQ------VHADIIKFGYNSILIICNSLV 115
           + +  ++  P+ +T   +L   +  D ++          VH DI        L +  +L+
Sbjct: 114 KLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALL 173

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA-KEGLNEEAIKLFVEMQHLGFKPSD 174
           D+Y K  C++ A  VF  +   D + +NA I   A  +   + A+ L   M   G  P+ 
Sbjct: 174 DAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNR 233

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
            +F A LS+    + + L R +HA V +  F+ +V VA AL+ +Y +   V E+  +F  
Sbjct: 234 ASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEA 293

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           M   + VS+N MI  +A       +  ++  +Q   F  ++  F T L    +     +G
Sbjct: 294 MAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLG 353

Query: 295 RQ--IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
               +H          +V V  +LV MY   G  + A+  F  +   + V W AM++AY 
Sbjct: 354 ESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYG 413

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             G   EA+ LF  M R +++ ++ ++ ++L    +   +S  + +H+ V+ +G  +   
Sbjct: 414 DNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQES 470

Query: 413 S-GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           S  + ++ M+A+SGSL++A+  F     ++ VSWN  ++A +   D    + +F  M   
Sbjct: 471 SIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHE 530

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG-CFD 530
           G++PD  +L+SV+  C+  G +E G      ++   ++       +++++++ + G   D
Sbjct: 531 GFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVD 590

Query: 531 EAEKLMAQMPFE-PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           E E+L A+MP +  D + W+++I +   H +     + A +LF++ + R
Sbjct: 591 ECERLFARMPDDRKDLVAWNTMIAAYAQHGH----GRKALKLFRIMQQR 635



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 246/574 (42%), Gaps = 58/574 (10%)

Query: 72  DYV---TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           DY+   T A LL  C       +  Q+H  I+K G     ++ N LV  Y K R LD A 
Sbjct: 20  DYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDAN 79

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM---QHLGFKPSDFTFAAALSAGV 185
             F  +  +   ++N LI   A +        L+  M   +    +P+  T  A L A +
Sbjct: 80  AAFSALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGA-I 135

Query: 186 GLADI-------ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
              D        A  R VH  +  ++   ++FVA ALLD Y K  CV  A ++F  +   
Sbjct: 136 ASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 195

Query: 239 DGVSYNVMI-TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           D + +N  I  C   +E+   +L L R +       ++  F  +LS   +   L + R I
Sbjct: 196 DLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSI 255

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H +      + +V VA +LV MY +CG  +E+  +F  ++  + V W AMI+A+ Q G+ 
Sbjct: 256 HARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHR 315

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ--LHSFVIRSGFMSNVFSGS 415
             A  ++  M +     ++ TF + L+A+   +S  LG+   LH ++  +G   +V  G+
Sbjct: 316 SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGT 375

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           AL+ MY  +G++  A   F  +P +NIVSWNA+++A   NG A+  ++ F  M +    P
Sbjct: 376 ALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAP 435

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA--- 532
           + VS L+VL  C     + E       +        +      +V +  RSG  +EA   
Sbjct: 436 NKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAA 492

Query: 533 ----------------------EKL---------MAQMPFEPDEIMWSSVINSCRIHKNL 561
                                 E L         M    F PD+    SV++ C     L
Sbjct: 493 FDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTL 552

Query: 562 EFAKKAADQL-FKMEKLRDAAPYVAMSNIYAVAG 594
           E  +    QL   +E  RD     A+ N+ A  G
Sbjct: 553 ELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCG 586


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/569 (38%), Positives = 325/569 (57%), Gaps = 2/569 (0%)

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A     D++LGR VH   VK          N LLD+Y+K   +  A  +F  M     
Sbjct: 5   LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V++  +I  YA      E+++LF E+         F  +T+L   A    L+ G+ +H  
Sbjct: 65  VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                  S + V N+L+DMYAKCG  E+A  +F  +     + W  MI  Y +     EA
Sbjct: 125 IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEA 184

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+LF +M    +  D  T A IL A A LASL  GK++H  ++R+GF S+    +AL+DM
Sbjct: 185 LSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDM 243

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G    A   F  +P +++++W  +I+    +G     + +F +M Q+G +PD VS 
Sbjct: 244 YVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSF 303

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +S+L ACSH GL++EG ++FN M  +  ++PK EHYA +VD+L RSG    A K +  MP
Sbjct: 304 ISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP 363

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
            EPD  +W ++++ CRIH +++ A+K A+ +F++E   +   YV ++N YA A +WE V 
Sbjct: 364 IEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEP-ENTGYYVLLANTYAEAEKWEEVK 422

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           ++++ +  RG++K    SW+E+KSKVH+F A +  HPQ  +I   ++ L  +MK+EGY P
Sbjct: 423 KLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFP 482

Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
            T  AL + D   K  +L  HSE+LA+AF ++N P    I V KNLR C DCH   K IS
Sbjct: 483 KTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFIS 542

Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K  GREI +RDS+RFHHFKDG C CR FW
Sbjct: 543 KTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           ++L  C+     +    VH   +K   +     CN+L+D Y K   LD A  VF  M  +
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
             V++ +LI  +A+EGL++EAI+LF EM   G  P  FT    L A      +  G+ VH
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
            ++ + +   N+FV NAL+D+Y+K   + +A  +F EMP  D +S+N MI  Y+ N    
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           E+L LF ++            + +L   A+   L  G+++H   +     S+ +VAN+LV
Sbjct: 183 EALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMY KCG    A+ +F  +     + WT MI+ Y   G    A+  F EM +A I  D+ 
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 378 TFASILRASAELASLSLGKQLHSFVI-RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +F SIL A +    L  G +  + +         +   + ++D+ A+SG L  A +  K 
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361

Query: 437 MP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           MP E +   W AL+S C  + D +   K  E + +   +P++     +L+
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLLA 409



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 4/347 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N L+  Y K G L  A  +F+ M  RT V+WT LI  Y+++    EA +LF +M  
Sbjct: 33  TTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDR 92

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           +G S PD  T  T+L  C+   +      VH  I +    S + +CN+L+D Y K   ++
Sbjct: 93  EGVS-PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSME 151

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A  VF EMP KD +S+N +I G++K  L  EA+ LF +M  L  KP   T A  L A  
Sbjct: 152 DANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACA 210

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            LA +  G++VH  +++  F  +  VANAL+D+Y K    V AR LF  +P  D +++ V
Sbjct: 211 SLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTV 270

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVT 304
           MI  Y  +     ++  F E++    +  +  F ++L   ++   L  G R  +      
Sbjct: 271 MIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDEC 330

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
               +++    +VD+ A+ G+   A +   ++        W A++S 
Sbjct: 331 NVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+  Y K G++  A  +F  M  +  +SW  +IGGYS+ +   EA  LF DM 
Sbjct: 133 NIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV 192

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +    PD  T A +L  C+   + +   +VH  I++ G+ S   + N+LVD Y K    
Sbjct: 193 LE--MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVP 250

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            LAR +F  +P KD +++  +I G+   G    AI  F EM+  G +P + +F + L A
Sbjct: 251 VLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYA 309


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/698 (34%), Positives = 396/698 (56%), Gaps = 13/698 (1%)

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +G  + + + +  LL  C +  + +    VH  ++K G +    + + LV+ Y K  
Sbjct: 54  LNKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCG 113

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ ARRVF+ MP+++ V++  L+ GF +    + AI +F EM + G  PS +T +A L 
Sbjct: 114 NMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLH 173

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  + LG Q HA+++K +   +  V +AL  LYSK   + +A K F  + E + +S
Sbjct: 174 ACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVIS 233

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +   ++    N    + L+LF E+       ++F  ++ LS       L++G Q+ +  I
Sbjct: 234 WTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCI 293

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ-----KGNL 357
                S ++V NSL+ +Y K G   EA   F  +  +S V W AMI+ + Q     K NL
Sbjct: 294 KFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNL 353

Query: 358 E------EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
                  EAL +F ++ ++ +  D  T +S+L   + + ++  G+Q+H+  I++GF+S+V
Sbjct: 354 SACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDV 413

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              ++L+ MY K GS++ A + F EM  R +++W ++I+  +Q+G +Q  L  FEDM  +
Sbjct: 414 IVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLA 473

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G +P++V+ + VLSACSH G++ + L YF  M +KYK++P  +HY  MVD+  R G  ++
Sbjct: 474 GVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQ 533

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A   + +M +EP E +WS+ I  CR H NLE    A++QL  + K +D   YV + N+Y 
Sbjct: 534 ALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSL-KPKDPETYVLLLNMYL 592

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            A +++ VS+V+K M    V K+  +SW+ +K KV+ F  ND+ HP ++ I + +E+L+ 
Sbjct: 593 SADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLA 652

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLK-YHSERLAIAFALINTPEGSPILVMKNLRACT 710
           + K  GY+   S  + DE+EE K  S   YHSE+LAI F L N P  SPI V+K+   C 
Sbjct: 653 KAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSSPIRVVKSTLICR 712

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           D H  IK +S +TGREI V+DS R H F +G CSC +F
Sbjct: 713 DSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGNF 750



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 244/480 (50%), Gaps = 14/480 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L++ Y K GN+  AR +F +M  R  V+WT L+ G+ Q +Q + A  +F +
Sbjct: 96  HDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQE 155

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M    GS P   T + +L  CS   +     Q HA IIK+  +    + ++L   Y K  
Sbjct: 156 MLY-AGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCG 214

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A + F  + +K+ +S+ + ++     G   + ++LFVEM     KP++FT  +ALS
Sbjct: 215 RLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALS 274

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               +  + LG QV +  +K  +  N+ V N+LL LY K   +VEA + F  M +V  V+
Sbjct: 275 QCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVT 334

Query: 243 YNVMITCYAWN-----------EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           +N MI  +A             ++  E+LK+F +L  +      F  S++LSV +  L +
Sbjct: 335 WNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAI 394

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           + G QIH QTI T  +S+V V+ SL+ MY KCG  E A + F  +S  + + WT+MI+ +
Sbjct: 395 EQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGF 454

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
            Q G  ++AL++F +M  A +  +  TF  +L A +    +S        + +   +  V
Sbjct: 455 SQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPV 514

Query: 412 FSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV 469
                 ++DM+ + G L+ A+   K+M  E +   W+  I+ C  +G+ +    + E ++
Sbjct: 515 MDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLL 574


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/613 (36%), Positives = 341/613 (55%), Gaps = 9/613 (1%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S  +N  +   A + L  E+I L+  M   G  P  F+F   L +   L+    G+Q+H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD--GVSYNVMITCYAWNEQY 256
            V K       FV  AL+ +Y K   V +ARK+F E P+     V YN +I+ Y  N + 
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            ++  +FR ++ T           L+ +      L +GR +H Q +     SEV V NS 
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           + MY KCG  E  + +F  +     + W A+IS Y Q G   + L L+ +M  + +  D 
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T  S+L + A L +  +G ++   V  +GF+ NVF  +A + MYA+ G+L  A   F  
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           MP +++VSW A+I     +G  +  L  F+DM++ G +PD    + VLSACSH GL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           L+ F +M ++YKL P  EHY+ +VD+L R+G  DEA + +  MP EPD  +W +++ +C+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IHKN++ A+ A  ++ + E   +   YV MSNIY+ +   E + +++  MRER  RK   
Sbjct: 438 IHKNVDMAELAFAKVIEFEP-NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
           YS+VE K +VH+F A D  H QT E+ R ++ L   + +     D      D  EE+   
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDC-----DRGEEVS-S 550

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
           + + HSERLAIAF ++N+  G+ ILV+KNLR C DCH  +K +SKI  R+  VRD+SRFH
Sbjct: 551 TTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFH 610

Query: 737 HFKDGFCSCRDFW 749
           +FKDG CSC+D+W
Sbjct: 611 YFKDGVCSCKDYW 623



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 224/493 (45%), Gaps = 9/493 (1%)

Query: 30  NSMVDRTA-VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDT 88
           NS V   A   W + +   + ++ F E+  L+  M    GS PD  +F  +L  C+    
Sbjct: 10  NSAVAAVASTPWNVRLRELAYQSLFSESISLYRSM-LRSGSSPDAFSFPFILKSCASLSL 68

Query: 89  ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD--SVSFNALI 146
                Q+H  + K G  +   +  +L+  YCK   +  AR+VF+E PQ    SV +NALI
Sbjct: 69  PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128

Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
           +G+       +A  +F  M+  G      T    +        + LGR +H   VK    
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
             V V N+ + +Y K   V   R+LF EMP    +++N +I+ Y+ N    + L+L+ ++
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
           + +      F   ++LS  A+    +IG ++         +  V V+N+ + MYA+CG  
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
            +A+ +F  +   S V WTAMI  Y   G  E  L LF +M +  I  D A F  +L A 
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368

Query: 387 AELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVS 444
           +       G +L   + R           S L+D+  ++G L +A++  + MP E +   
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           W AL+ AC  + +      +F  +++  ++P+++    ++S        +EG+     M 
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486

Query: 505 QKYKLRPKKEHYA 517
           ++   R KK  Y+
Sbjct: 487 RERAFR-KKPGYS 498



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 11/356 (3%)

Query: 12  LISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           LIS Y K G +A AR++F  N    + +V +  LI GY+  ++  +A  +F  M+  G S
Sbjct: 94  LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D VT   L+  C+ P+       +H   +K G +S + + NS +  Y K   ++  RR
Sbjct: 154 -VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F EMP K  +++NA+I+G+++ GL  + ++L+ +M+  G  P  FT  + LS+   L  
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             +G +V   V    FV NVFV+NA + +Y++   + +AR +F  MP    VS+  MI C
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK----LDLQIGRQIHTQTIVTT 305
           Y  +   +  L LF ++           F  +LS  ++       L++ R +  +  +  
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 392

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
                   + LVD+  + GR +EA E   ++        W A++ A     N++ A
Sbjct: 393 GPEHY---SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMA 445



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 5/241 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N  I+ Y+K G++   R LF+ M  +  ++W  +I GYSQ     +  +L+  M++ G  
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  T  ++LS C+         +V   +   G+   + + N+ +  Y +   L  AR 
Sbjct: 255 -PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGL 187
           VF  MP K  VS+ A+I  +   G+ E  + LF +M   G +P    F   LSA    GL
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVM 246
            D  L     A   +          + L+DL  +   + EA +    MP E DG  +  +
Sbjct: 374 TDKGL-ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432

Query: 247 I 247
           +
Sbjct: 433 L 433



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 4/218 (1%)

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
           +++ PW   +     +    E+++L+  M R+  S D  +F  IL++ A L+    G+QL
Sbjct: 16  VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS--WNALISACAQNG 456
           H  V + G  +  F  +AL+ MY K G + DA + F+E P+ + +S  +NALIS    N 
Sbjct: 76  HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
                   F  M ++G   DSV++L ++  C+    +  G +  +    K  L  +    
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG-RSLHGQCVKGGLDSEVAVL 194

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            S + +  + G  +   +L  +MP +   I W++VI+ 
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG 231



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 62/146 (42%), Gaps = 7/146 (4%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +N  IS Y + GNLA AR +F+ M  ++ VSWT +IG Y           LF DM 
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM- 349

Query: 65  TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
              G  PD   F  +LS CS     D   EL +      K         C  LVD   + 
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC--LVDLLGRA 407

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALI 146
             LD A    + MP + D   + AL+
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALL 433


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/556 (37%), Positives = 335/556 (60%), Gaps = 1/556 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           RQVHA +       N+ VAN LL +Y +   + +A++LF  M +    S++V++  YA  
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
             +     +FREL  +      +    ++    +  DL+ GR IH  T+         V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +LVDMYA+C   E+A +IF  +       WT MI A  + G   E+L  F  M    I 
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D+    +++ A A+L +++  K +H+++  +G+  +V  G+A++DMYAK GS++ A   
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  M  RN+++W+A+I+A   +G  +  L+ F  M++SG  P+ ++ +S+L ACSH GLI
Sbjct: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLI 369

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           EEG ++F+SM  +Y + P  +HY  MVD+L R+G  DEA +++  MP E DE++W +++ 
Sbjct: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLG 429

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CRIH++L+ A++ A  L K++  +    YV +SNIYA AG+WE +++ +  M + G+RK
Sbjct: 430 ACRIHRHLDLAERVARSLLKLQS-QKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRK 488

Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEI 673
           +   +W+E+  K++ F   D+ HP++NEI + ++ L ++++  GY PDT+  L+D DEE+
Sbjct: 489 IPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEV 548

Query: 674 KVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           K   L  HSE+LAIAF L+  P+G PI + KNLR C DCH   K +S I  + I VRD+ 
Sbjct: 549 KQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAK 608

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK+G CSCRD+W
Sbjct: 609 RFHHFKEGVCSCRDYW 624



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 177/361 (49%), Gaps = 2/361 (0%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           QVHA I   G    L + N L+  Y +   L+ A+ +F  M ++   S++ ++ G+AK G
Sbjct: 71  QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVG 130

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
                  +F E+   G    D++    + A   L D+  GR +H   +K       FV  
Sbjct: 131 NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCA 190

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
            L+D+Y++   V +A ++F +M + D  ++ VMI   A +    ESL  F  ++      
Sbjct: 191 TLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVP 250

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +    T++   A    +   + IH     T    +V +  +++DMYAKCG  E A+ IF
Sbjct: 251 DKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIF 310

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +   + + W+AMI+AY   G  E+AL LF  M R+ I  ++ TF S+L A +    + 
Sbjct: 311 DRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIE 370

Query: 394 LGKQLHSFVI-RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
            G++  S +    G   +V   + ++D+  ++G L +A++  + MP E++ V W AL+ A
Sbjct: 371 EGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430

Query: 452 C 452
           C
Sbjct: 431 C 431



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 220/484 (45%), Gaps = 31/484 (6%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    N L+  YV+ G L  A+ELF+ M  R   SW++++GGY++   F   F +F ++
Sbjct: 83  RNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFREL 142

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G    DY +   ++  C +         +H   +K G +    +C +LVD Y + + 
Sbjct: 143 LRSGAPLDDY-SAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKV 201

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A ++F +M ++D  ++  +I   A+ G+  E++  F  M++ G  P        + A
Sbjct: 202 VEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYA 261

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +   + +HA++  T +  +V +  A++D+Y+K   V  AR +F  M   + +++
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           + MI  Y ++ Q +++L+LF  +  +    ++  F +LL   ++   ++ G++  +    
Sbjct: 322 SAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWD 381

Query: 304 TTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL 361
              ++ +VK    +VD+  + GR +EA E+   +      V W A++ A           
Sbjct: 382 EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA----------- 430

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL--- 418
                 CR +   D A      R +  L  L   K  H +V+ S   +N      +    
Sbjct: 431 ------CRIHRHLDLAE-----RVARSLLKLQSQKPGH-YVLLSNIYANAGKWEDMAKTR 478

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF-EDMVQSGYQPDS 477
           D+  K G  K   +T+ E+ E+ +  +        ++ +    LK   E +  +GY PD+
Sbjct: 479 DLMTKGGLRKIPGRTWIEVGEK-LYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDT 537

Query: 478 VSLL 481
             +L
Sbjct: 538 NDVL 541


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/671 (35%), Positives = 369/671 (54%), Gaps = 58/671 (8%)

Query: 90  NELIQVHADIIKF---GYNSIL-------IICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           N++IQ+HA IIK    G N +L         C+S  D       L  AR VF E+P  D+
Sbjct: 17  NQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSAND-------LLYARSVFDEIPSPDT 69

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHA 198
             +N +I  +      +E++ LF +M+H    P D ++ +  + A   L D   G+++H 
Sbjct: 70  FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHT 129

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
            V+K     ++FV  AL+++Y+K   +  AR +  EM   D V YNV++  Y    +   
Sbjct: 130 QVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEIN- 188

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
                  L    FDR   P   L+S                              N+++ 
Sbjct: 189 -------LAHDLFDR--MPERDLVS-----------------------------WNTMIH 210

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
            +A  G    AK++F        + W++MI+AY +     EAL LF EM  AN+  D+ T
Sbjct: 211 GHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVT 270

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             S+L A  ++ +L +GK +H  + R+    ++  G++L+DMYAK G + ++++ F  M 
Sbjct: 271 MVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMN 330

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            R++ +W+A+I   A +G  +  L  F  M+    +P+ V+ + VLSACSH GL++EG  
Sbjct: 331 NRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWT 390

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
           YF SM++ Y + PK EHY  +VDIL R+G   EA +L+  MPF PD I+W +++ +CRI+
Sbjct: 391 YFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIY 450

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
           KN+E A++A   L ++E   D   YV +SNIY+ A +W+ V  V++ M+   ++KV   S
Sbjct: 451 KNVEIAEEATVNLLELEPHVDGN-YVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSS 509

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESL 678
            +E+ + VH F A D+ HP++ +I R +  +   +K  GY P T+  L D DE+ K  +L
Sbjct: 510 SIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENAL 569

Query: 679 KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF 738
            +HSE+LAIAF L++T  GS I ++KNLR C DCH AIKLIS+   R I VRD +RFHHF
Sbjct: 570 AHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHF 629

Query: 739 KDGFCSCRDFW 749
            +G CSC+D+W
Sbjct: 630 VNGSCSCKDYW 640



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I G+   G++ TA++LF+   +R  +SW+ +I  Y++  Q  EA +LF
Sbjct: 197 MPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLF 256

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+      PD VT  ++LS C +         +H  I +      L +  SLVD Y K
Sbjct: 257 HEMQL-ANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAK 315

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D + RVF  M  +D  +++A+I G A  G  E A+  F +M     KP+D TF   
Sbjct: 316 CGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGV 375

Query: 181 LSA--GVGLAD 189
           LSA   +GL D
Sbjct: 376 LSACSHIGLVD 386



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/407 (20%), Positives = 160/407 (39%), Gaps = 66/407 (16%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFAT 78
           + +L  AR +F+ +       W  +I  Y      +E+  LF  MR       D  + + 
Sbjct: 51  ANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSL 110

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV-------- 130
           ++  C          ++H  ++K G  S L +  +L++ Y K   +++AR +        
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170

Query: 131 -----------------------FKEMPQKDSVSFNALITG------------------- 148
                                  F  MP++D VS+N +I G                   
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230

Query: 149 ------------FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
                       +AK   + EA++LF EMQ     P   T  + LSA   +  + +G+ +
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  + +     ++ +  +L+D+Y+K   +  + ++F  M   D  +++ MI   A N  +
Sbjct: 291 HECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLA-NHGF 349

Query: 257 KE-SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVAN 314
            E +L  F ++       +   F  +LS  ++   +  G    T       +S +++   
Sbjct: 350 GELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG 409

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEA 360
            +VD+  + GR +EA E+  ++      + W A++ A     N+E A
Sbjct: 410 CVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIA 456


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/588 (37%), Positives = 349/588 (59%), Gaps = 4/588 (0%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIA-LGRQVHAFVVKTNFVE-NVFVANALLDLYSKH 222
           M  LG +P+DFTF +A  A       + +G Q+H+  ++  ++  + FV+ A LD+Y K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             +  AR LFGEMP  + V++N ++T    + +  E+++ +  L+      +        
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           +  A  + L +G Q H   +      +V V NS+VD Y KC    +A+ +F  +   ++V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W +M++AY Q G  EEA   ++   R+         +S L   A L  L LG+ LH+  
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           +RS   +N+F  SAL+DMY K G ++DA Q F E P+RN+V+WNA+I   A  GDAQ  L
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300

Query: 463 KSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
             F+DM++SG   P+ ++L++V+++CS  GL ++G + F +M +++ + P+ EHYA +VD
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +L R+G  ++A +++  MP  P   +W +++ +C++H   E  + AA++LF+++  +D+ 
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDP-QDSG 419

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
            +V +SN++A AG+W   + ++K M+  G++K    SWV  K+ VHVF A D  H   NE
Sbjct: 420 NHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNE 479

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           I+  +  L ++M+  GY PDT  +L+D +EE K   +  HSE+LA+AF LI  P G PI 
Sbjct: 480 IQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIR 539

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +MKNLR C DCH A K IS I GREI VRD++RFHHFK   CSC D+W
Sbjct: 540 IMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 202/398 (50%), Gaps = 7/398 (1%)

Query: 68  GSDPDYVTFATLL-SGCSEPDTANELIQVHADIIKFGYNSI--LIICNSLVDSYCKIRCL 124
           G  P+  TF +   +  S P  +    Q+H+  I+FGY  +   + C +L D Y K   L
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAAL-DMYFKTGRL 63

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            LAR +F EMP ++ V++NA++T    +G   E I+ +  ++  G  P+  +  A  +A 
Sbjct: 64  KLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNAC 123

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G   ++LG Q H FVVK  F  +V V N+++D Y K  C  +AR +F  M   + VS+ 
Sbjct: 124 AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 183

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+  YA N   +E+   +   + +  + + F  S+ L+  A  L L +GR +H   + +
Sbjct: 184 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 243

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              + + VA++LVDMY KCG  E+A++IF      + V W AMI  Y   G+ + AL +F
Sbjct: 244 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 303

Query: 365 IEMCRANISA-DQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
            +M R+  +A +  T  +++ + +       G +L  +   R G        + ++D+  
Sbjct: 304 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 363

Query: 423 KSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
           ++G  + A +  + MP R  +S W AL+ AC  +G  +
Sbjct: 364 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 8/348 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K+G L  AR LF  M +R  V+W  ++       +  E  + +  +R  GG  P+ V+
Sbjct: 57  YFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGL-PNVVS 115

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
                + C+     +   Q H  ++K G+   + + NS+VD Y K RC   AR VF  M 
Sbjct: 116 ACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMG 175

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            ++SVS+ +++  +A+ G  EEA   ++  +  G +P+DF  ++AL+   GL  + LGR 
Sbjct: 176 VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRA 235

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA  V++    N+FVA+AL+D+Y K  CV +A ++F E P+ + V++N MI  YA    
Sbjct: 236 LHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGD 295

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT--QTIVTTAISEVKVA 313
            + +L +F ++   R   +   + TL++V+ +     + +  +   +T+      E +  
Sbjct: 296 AQNALLVFDDM--IRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTE 353

Query: 314 N--SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           +   +VD+  + G  E+A E+   +    ++  W A++ A    G  E
Sbjct: 354 HYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 85/160 (53%), Gaps = 1/160 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K      AR +F+ M  R +VSW  ++  Y+Q     EAF  ++  R  G  
Sbjct: 152 NSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE 211

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D++  ++ L+ C+     +    +HA  ++   ++ + + ++LVD Y K  C++ A +
Sbjct: 212 PTDFMV-SSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 270

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           +F E PQ++ V++NA+I G+A  G  + A+ +F +M   G
Sbjct: 271 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSG 310



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 1/150 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N    + L+  Y K G +  A ++F     R  V+W  +IGGY+     + A  +F D
Sbjct: 246 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 305

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADII-KFGYNSILIICNSLVDSYCKI 121
           M   G + P+Y+T   +++ CS      +  ++   +  +FG          +VD   + 
Sbjct: 306 MIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRA 365

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              + A  V + MP + S+S    + G  K
Sbjct: 366 GMEEQAYEVIQGMPMRPSISVWGALLGACK 395


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/675 (36%), Positives = 369/675 (54%), Gaps = 56/675 (8%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLARR---VFKEMPQKDSVS 141
           T N+L Q+H  I K G + I      LV++  +I     LD AR+   +FKE  + D   
Sbjct: 37  TLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDAL 96

Query: 142 F--NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           F  N+LI G++  GL  EAI L+V M  LG  P+ +TF   LS    +A    G QVH  
Sbjct: 97  FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           VVK    E+VF+ N L+  Y++   +    K+F  M E + VS+  +I  YA  ++ KE+
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           + LF E+                    NK+                      + N+LVDM
Sbjct: 217 VSLFFEM-------------------LNKV----------------------MVNALVDM 235

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KCG  + AK +F      + V +  ++S Y ++G   EAL +  EM +     D+ T 
Sbjct: 236 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTM 295

Query: 380 ASILRASAELASLSLGK-----QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
            S + ASA+L  L  GK      +H+++ ++G   ++   +AL+DM+A+ G  + A+Q F
Sbjct: 296 LSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVF 355

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
            +M ER++ +W A I   A  G+ +     F  M+  G +PD V  + VL+ACSH G +E
Sbjct: 356 NKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVE 415

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +GL  F S+ + + + P+ EHY  MVD+L R+G   EA  L+  MP EP++++W S++ +
Sbjct: 416 QGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 474

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR+HKN+E A  AA+++ ++   R A  +V +SNIYA AG+W  V++V+  +RE+GVRKV
Sbjct: 475 CRVHKNVEMATYAAERINELAPQR-AGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKV 533

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              S V++   +H FT+ DE HP+   I   ++ +       G+ PD S  L D DE+ K
Sbjct: 534 PGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEK 593

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
              L  HSE+LAIAF LI T    PI V+KNLR C+DCH+  K+ S I  REI VRD++R
Sbjct: 594 EYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNR 653

Query: 735 FHHFKDGFCSCRDFW 749
           FH F+ G CSC D+W
Sbjct: 654 FHFFRQGLCSCCDYW 668



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 194/421 (46%), Gaps = 58/421 (13%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           LI GYS     REA  L+V M   G + P++ TF  +LSGC++     E IQVH  ++K 
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVT-PNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G    + I N L+  Y +   +D   +VF+ M +++ VS+ +LI G+A+    +EA+ LF
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            EM                                          N  + NAL+D+Y K 
Sbjct: 221 FEML-----------------------------------------NKVMVNALVDMYMKC 239

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFST 280
             +  A++LF E  + + V YN +++ YA     +E+L +  E+  Q  R DR      T
Sbjct: 240 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRV-----T 294

Query: 281 LLSVV---ANKLDLQIGR-----QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           +LS +   A  +DL  G+      +HT         ++++  +LVDM+A+CG  + A ++
Sbjct: 295 MLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQV 354

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  ++      WTA I     +GN E A  LF +M    +  D   F  +L A +    +
Sbjct: 355 FNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQV 414

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
             G  + S +   G    +     ++D+  ++G L++A    K MP E N V W +L++A
Sbjct: 415 EQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 474

Query: 452 C 452
           C
Sbjct: 475 C 475



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 158/357 (44%), Gaps = 48/357 (13%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y + G++    ++F  M +R  VSWT LI GY++ ++ +EA  LF +M      
Sbjct: 170 NCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM------ 223

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                                              N +++  N+LVD Y K   +D A+R
Sbjct: 224 ----------------------------------LNKVMV--NALVDMYMKCGAIDAAKR 247

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E   ++ V +N +++ +A++GL  EA+ +  EM   G +P   T  +A+SA   L D
Sbjct: 248 LFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVD 307

Query: 190 IALGRQVHAFVVKTNFVEN-----VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           +  G+  H + V T   +N     + +  AL+D++++      A ++F +M E D  ++ 
Sbjct: 308 LFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWT 367

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             I   A     + +  LF ++           F  +L+  ++   ++ G  I +     
Sbjct: 368 AAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDH 427

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
               +++    +VD+  + G   EA ++  ++    + V W ++++A     N+E A
Sbjct: 428 GISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMA 484



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 6/237 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N V  N L+  Y+K G +  A+ LF+  VDR  V +  ++  Y+++   REA  +  +M 
Sbjct: 225 NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEML 284

Query: 65  TDGGSDPDYVTFATLLSGCSEP-----DTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
              G  PD VT  + +S  ++              VH  I K G    + +  +LVD + 
Sbjct: 285 QQ-GPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFA 343

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           +      A +VF +M ++D  ++ A I   A EG  E A  LF +M   G KP    F  
Sbjct: 344 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 403

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            L+A      +  G  + + +        +     ++DL  +   + EA  L   MP
Sbjct: 404 VLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP 460


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/540 (38%), Positives = 330/540 (61%), Gaps = 6/540 (1%)

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
           F+ N L+++Y K   + +A+ +F +MP+ + VS+  MI+ Y+  +   ++L+    +   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               + F +S++L       +L   RQ+H   I     S+V V ++L+D+Y++ G  E A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
             +F  +     V W+++I+ + Q  + +EAL LF  M RA   A Q T  S+LRA   L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           A L LG+Q+H  V++  +  ++   +ALLDMY K GSL+DA   F  M E++++SW+ +I
Sbjct: 178 ALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +  AQNG ++  LK FE M   G +P+ V+++ VL ACSH GL+EEGL YF+SM + + +
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P +EHY  M+D+L R+G   EA  L+ +M  EPD + W +++N+CR+H+N++ A  AA 
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAK 355

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           Q+ +++  +DA  YV +SNIYA   +W  V++V++ M  RG++K    SW+E+  ++H F
Sbjct: 356 QILRLDP-QDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAF 414

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D  HPQ  EI  ++  L+ ++   GY PDT+  L D + E   +SL+YHSE+LAI F
Sbjct: 415 ILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVF 474

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L++ P G  I + KNLR C DCH   KL++K+  R I +RD  R+HHF+DG CSC DFW
Sbjct: 475 GLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
           + N L++ Y K   L  A+ VF +MP ++ VS+  +I+ ++   LN++A++  V M   G
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P+ FT+++ L A  GL ++   RQ+H  ++K     +VFV +AL+D+YS+   +  A 
Sbjct: 62  VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           ++F EM   D V ++ +I  +A N    E+L+LF+ ++   F   Q   +++L       
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L++GRQ+H    V     ++ + N+L+DMY KCG  E+A  +F  +     + W+ MI+
Sbjct: 179 LLELGRQVHVH--VLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFM 408
              Q G  +EAL LF  M    I  +  T   +L A +    +  G    HS     G  
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
                   ++D+  ++G L +A+    EM  E + V+W AL++AC
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNAC 341



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 9/373 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI+ YVK G L  A+++F+ M DR  VSWT +I  YS      +A +  V M  +G  
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG-V 62

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  T++++L  C   D    L Q+H  IIK G +S + + ++L+D Y +   L+ A R
Sbjct: 63  RPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALR 119

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF EM   D V ++++I GFA+    +EA++LF  M+  GF     T  + L A  GLA 
Sbjct: 120 VFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLAL 179

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQVH  V+K +  +++ + NALLD+Y K   + +A  +F  M E D +S++ MI  
Sbjct: 180 LELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHTQTIVTTAIS 308
            A N   KE+LKLF  ++      +      +L   ++   ++ G    H+   +     
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP 297

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             +    ++D+  + GR  EA ++   +      V W A+++A     N++ A++   ++
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357

Query: 368 CRANISADQATFA 380
            R +   D  T+ 
Sbjct: 358 LRLD-PQDAGTYV 369



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 3/147 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N L+  Y K G+L  A  +F  MV++  +SW+ +I G +Q    +EA KLF  
Sbjct: 194 DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFES 253

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           M+   G  P+YVT   +L  CS      E L   H+    FG +        ++D   + 
Sbjct: 254 MKV-LGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRA 312

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALIT 147
             L  A  +  EM  + D+V++ AL+ 
Sbjct: 313 GRLSEAVDLINEMECEPDAVTWRALLN 339


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 263/806 (32%), Positives = 420/806 (52%), Gaps = 86/806 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVS---WTILIGGYSQKNQFREAFKL 59
           N  T  TN LI  Y+ S ++  A  L    V  +  S   W  LI      N    A +L
Sbjct: 55  NSYTNVTN-LIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRL 113

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M+T   + PD+ TF  +   C E         +H  +I+ G+ S + +CN+++  Y 
Sbjct: 114 FRRMKTLHWT-PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYG 172

Query: 120 KIRCLDLARRVFKEMPQK---DSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDF 175
           K + +  AR+VF E+  +   DSV++N++++ ++   +   A+ LF EM    G  P   
Sbjct: 173 KCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTV 232

Query: 176 TFAAALSA----GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
                L      G+GL     GRQVH F V++  VE+VFV NAL+D+Y+K   + +A K+
Sbjct: 233 GVVNILPVCGYLGLGLC----GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKV 288

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST----------- 280
           F  M   D V++N M+T Y+ N +++++L LF +++  + +     +S+           
Sbjct: 289 FERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFG 348

Query: 281 ------------------------LLSVVANKLDLQIGRQIHTQTIVTTAISE------- 309
                                   LLS  A+   L  G++ H  ++      E       
Sbjct: 349 CEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDD 408

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           + V N+L+DMYAKC   E A+ +F  +       V WT MI  Y Q G+   AL LF EM
Sbjct: 409 LAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEM 468

Query: 368 CRAN--ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN--VFSGSALLDMYAK 423
            + +  I  +  T + +L A A LA+L  GKQ+H++V+R   + +  +F  + L+DMY+K
Sbjct: 469 FKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSK 528

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           SG +  A   F  M +RN VSW +L++    +G ++   + F++M +     D ++ L V
Sbjct: 529 SGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVV 588

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L ACSH G+              + + P  EHYA MVD+L R+G   EA +L+  MP EP
Sbjct: 589 LYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEP 635

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
             ++W +++++CRIH N E A+ AA +L +++   D   Y  +SNIYA A +W+ V+++ 
Sbjct: 636 TPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGT-YTLLSNIYANARRWKDVARIG 694

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             M+  G++K+  +SWV+ +  +  F   D  H Q+ +I   + +L++ +K        +
Sbjct: 695 YLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------AN 747

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
            +LHD D+E K + L  HSE+LA+A+A++  P G+PI + KNLR C D H+AI  IS I 
Sbjct: 748 FSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIV 807

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
             EI +RDSSRFH FK+G CSC+ +W
Sbjct: 808 EHEIILRDSSRFHQFKNGSCSCKGYW 833


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/712 (33%), Positives = 389/712 (54%), Gaps = 43/712 (6%)

Query: 77   ATLLSGCSEPDTANELIQVHADIIKFG--YNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            A ++ G  E +   +++  HA +IK    +N      N L+ SY        A  VF   
Sbjct: 426  ADVVEGTDEQEHGIKMM--HAQMIKLPQKWNPDAAAKN-LISSYLGFGDFWSAAMVFYVG 482

Query: 135  PQKDSVSFNALITGF-AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
              ++ + +N+ +  F +  G     +++F E+   G       ++ AL     + DI LG
Sbjct: 483  LPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLG 542

Query: 194  RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
             ++H  ++K  F  +V++  AL++ Y +   + +A ++F EMP  + + +N  I     +
Sbjct: 543  MEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQS 602

Query: 254  EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD-LQIGRQIHTQTIVTTAISEVKV 312
            E+ ++ ++LFR++QF+           +L    ++L  L +G++ H   +      +V V
Sbjct: 603  EKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYV 662

Query: 313  ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
              SL+DMY K      A+ +F N+ + +   W +++S Y  KG  E+AL L  +M +  I
Sbjct: 663  GTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 722

Query: 373  SADQATF--------------------------------ASI---LRASAELASLSLGKQ 397
              D  T+                                ASI   LRA A L+ L  GK+
Sbjct: 723  KPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKE 782

Query: 398  LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
            +H   IR+GF+ +VF  +AL+DMY+KS SLK+A + F+ +  + + SWN +I   A  G 
Sbjct: 783  IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGL 842

Query: 458  AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             +  +  F +M + G  PD+++  ++LSAC + GLI EG +YF+SM   Y++ P+ EHY 
Sbjct: 843  GKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYC 902

Query: 518  SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
             MVD+L R+G  DEA  L+  MP +PD  +W +++ SCRIHKNL+FA+ AA  LFK+E  
Sbjct: 903  CMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEP- 961

Query: 578  RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
             ++A Y+ M N+Y++  +WE +  +++ M   GVR    +SW+++  +VHVF+++++ HP
Sbjct: 962  NNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHP 1021

Query: 638  QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
               +I  ++  L+ EMKK GY PD +C   + DE  K + L  H+E+LAI + LI    G
Sbjct: 1022 DAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAG 1081

Query: 698  SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             PI V+KN R C+DCH+A K IS +  RE+ +RD  RFHHF++G CSC DFW
Sbjct: 1082 EPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 6/241 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           M N+N  + N L+SGY   G    A  L N M    +    V+W  +I GY+     +EA
Sbjct: 686 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 745

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
              F  M+ +G   P+  +   LL  C+      +  ++H   I+ G+   + +  +L+D
Sbjct: 746 LAFFAQMQQEGVM-PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 804

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
            Y K   L  A +VF+ +  K   S+N +I GFA  GL +EAI +F EMQ +G  P   T
Sbjct: 805 MYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAIT 864

Query: 177 FAAALSAGVGLADIALG-RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           F A LSA      I  G +   + +     V  +     ++DL  +   + EA  L   M
Sbjct: 865 FTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM 924

Query: 236 P 236
           P
Sbjct: 925 P 925


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/684 (34%), Positives = 378/684 (55%), Gaps = 5/684 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +    L+  YV  G    A+ +F  +    +  W  +I G++   QF  A   +  M 
Sbjct: 80  NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM- 138

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G+ PD  TF  ++  C   ++      VH  I   G+   + + +SL+  Y +  C+
Sbjct: 139 LGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCI 198

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR +F  MP KD V +N ++ G+ K G  + A  +F+EM+     P+  TFA  LS  
Sbjct: 199 HDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVAN--ALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                I  G Q+H  VV +    +  VAN  AL+D+Y K   V  ARK+F +   VD V 
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVV 318

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
              MI+ Y  N     +L++FR L   R   +    +++L   A    L +G+++H   +
Sbjct: 319 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHIL 378

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                    V ++++DMYAKCGR + A + F  +S    V W +MI++  Q G  EEA++
Sbjct: 379 KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAID 438

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF +M  A    D  + ++ L A A L +L  GK++H+F++R  F S++F+ SAL+DMY+
Sbjct: 439 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 498

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G+L  A + F  M E+N VSWN++I+A   +G  + +L  F  M+  G QPD V+ L+
Sbjct: 499 KCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLA 558

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           ++SAC H G ++EG+ YF  MT++  +  + EHYA MVD+  R+G  +EA  ++  MPF 
Sbjct: 559 IISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFS 618

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD  +W +++ +CR+H N+E A+ A+  LF ++  +++  YV +SN++A AGQWESV ++
Sbjct: 619 PDAGVWGTLLGACRLHGNVELAEVASRNLFDLDP-QNSGYYVLLSNVHANAGQWESVLKI 677

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+ERGV+KV   SW+++ +  H+F A D  HPQ+++I   ++NL  E++KEGY P  
Sbjct: 678 RSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQL 737

Query: 663 SCALHDEDEEIKVESLK-YHSERL 685
              +H +   +    +  YHS ++
Sbjct: 738 YLPMHPQTMGLHNGRISYYHSSKI 761



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 283/545 (51%), Gaps = 24/545 (4%)

Query: 76  FATLLSGCSEPDTANELIQVHADII--KFGYNSIL--------IICNSLVDSYCKIRCLD 125
             ++L  C++P   ++  Q HA ++    GYN IL        ++C + +D         
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD--------- 99

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A+ +F ++    S  +N +I GF   G  + A+  + +M   G  P  +TF   + A  
Sbjct: 100 -AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG 158

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GL  +ALGR VH  +    F  +VFV ++L+  YS++ C+ +AR LF  MP  DGV +NV
Sbjct: 159 GLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNV 218

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  Y  N  +  +  +F E++ T  + +   F+ +LSV A+++ +  G Q+H   + + 
Sbjct: 219 MLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG 278

Query: 306 AISEVKVANS--LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              +  VAN+  L+D+Y KC   E A++IF   + +  V  TAMIS YV  G    AL +
Sbjct: 279 LEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEI 338

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  + +  + A+  T AS+L A A LA+L+LGK+LH  ++++G   + + GSA++DMYAK
Sbjct: 339 FRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAK 398

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G L  A QTF  + +++ V WN++I++C+QNG  +  +  F  M  +G + D VS+ + 
Sbjct: 399 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 458

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSAC++   +  G +  ++   +   R      ++++D+  + G  D A ++   M  E 
Sbjct: 459 LSACANLPALHYGKE-IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EK 516

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           +E+ W+S+I +   H  L+ +      +       D   ++A+ +    AGQ +      
Sbjct: 517 NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYF 576

Query: 604 KAMRE 608
           + M E
Sbjct: 577 RCMTE 581



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 256 YKESLKLFRELQFT-RFDRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           +  S+ + + LQF+   D S  P   ++L    +   L  GRQ H Q +V        + 
Sbjct: 25  HTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILG 84

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
             L+ MY  CG F +AK IF  L    + PW  MI  +   G  + AL  + +M      
Sbjct: 85  TKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTL 144

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D+ TF  +++A   L S++LG+ +H  +   GF  +VF GS+L+  Y+++G + DA   
Sbjct: 145 PDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYL 204

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F  MP ++ V WN +++   +NGD       F +M ++   P+SV+   VLS C+   +I
Sbjct: 205 FDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMI 264

Query: 494 EEGLQ 498
             G Q
Sbjct: 265 NFGSQ 269


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/747 (32%), Positives = 400/747 (53%), Gaps = 24/747 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  Y K G +  AR +F+S+      SWTIL+  Y+Q    +   +L   M   G  
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG-V 178

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHAD---IIKFGYNSILIICNSLVDSYCKIRCLDL 126
            P+ VT AT++   SE    +E  ++HA      +  Y+ +L+   +L+D Y K   +  
Sbjct: 179 WPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLV--TALIDMYAKCGDIFH 236

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A  VF +   KD    NA+I+ + + G   +A+  F  +Q  G +P+  T+A    A   
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
               +  R  H   + +    +V V  AL+ +YS+   + +AR++F  MP  + V++NVM
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVM 356

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  YA      E+L+L+  ++    +  +  F  +L   +    L  GR IH   +    
Sbjct: 357 IAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGY 416

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEALNLF 364
            S + V ++L+ MY+ CG   +A ++F     +H S + WTAM++A  + G    AL LF
Sbjct: 417 DSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALF 476

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M    + A+  TF S + A + + +L  G  +   VI +G + +V  G++L+++Y K 
Sbjct: 477 RKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKC 536

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A++ F  +  +NIV+WN +++A +QNG+   + +  ++M   G QP+ ++LL++L
Sbjct: 537 GRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNML 596

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
             CSH GL+ + + YF SM   + L P  EHY  +VD+L RSG  +E E  ++  PF  D
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            ++W S++ SC IH ++E   +AA ++  ++  ++A+PYV +SN++A  G  ++V  + K
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDP-KNASPYVLLSNMFAAIGMLDAVKSLAK 715

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
              ER ++K  + S++E+   VH F     LH    +I  ++    +EM++ G+ P    
Sbjct: 716 LAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP---- 771

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            LHD           YH E+LAIAF  I++P G P+ V+KNLR C  CH  IK I K+TG
Sbjct: 772 -LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKHICKMTG 822

Query: 725 REITVRDSSRFHHFK--DGFCSCRDFW 749
           R+I+VR+ +R HHF+  D  CSC D+W
Sbjct: 823 RDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 215/489 (43%), Gaps = 42/489 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N++    N +IS Y++ G    A   FN +                              
Sbjct: 246 NKDLACCNAMISAYIQLGYTVDAVSTFNRI------------------------------ 275

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                G  P+ VT+A L   C+     ++    H   I       +++  +LV  Y +  
Sbjct: 276 --QPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCG 333

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ ARRVF  MP K+ V++N +I G+A+EG  +EA++L+V M+  G +P + TF   L 
Sbjct: 334 SLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLE 393

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--GEMPEVDG 240
           +      +A GR +H  VV   +  ++ V +AL+ +YS    + +A  +F  G       
Sbjct: 394 SCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSV 453

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  M+T    N + + +L LFR++       +   F + +   ++   L  G  I  +
Sbjct: 454 ISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFER 513

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            IVT  + +V +  SL+++Y KCGR + A E+F  LS  + V W  +++A  Q G  EE 
Sbjct: 514 VIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNG--EET 571

Query: 361 LN--LFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
           L+  L  EM       ++ T  ++L   +    ++       S V     +        L
Sbjct: 572 LSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCL 631

Query: 418 LDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           +D+  +SG L++        P   + V W +L+ +C  + D +  L++   ++  G  P 
Sbjct: 632 VDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVL--GLDPK 689

Query: 477 SVSLLSVLS 485
           + S   +LS
Sbjct: 690 NASPYVLLS 698



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 150/285 (52%), Gaps = 1/285 (0%)

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  +  + N +++ Y K  CV +AR +F  +   +  S+ +++  YA N  +K  L+L R
Sbjct: 112 FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKC 323
           ++       +    +T++  V+   +    R+IH +   T  ++ +V +  +L+DMYAKC
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G    A+ +F    +       AMISAY+Q G   +A++ F  +  + +  +Q T+A + 
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           RA A     S  +  H   I S    +V   +AL+ MY++ GSL+DA + F  MP +N+V
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVV 351

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +WN +I+  AQ G     L+ +  M  +G +PD ++ ++VL +CS
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCS 396


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/679 (34%), Positives = 377/679 (55%), Gaps = 16/679 (2%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC--KIRCLDLARRVF 131
           + FA    G   P    E+ Q+HA  +K    +   + + L+  Y   KI  L  AR +F
Sbjct: 14  LGFADQRMGLCAP---QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIF 70

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             + ++  + +N +I  + +   + + I LF E+ H  + P +FT    +     L  + 
Sbjct: 71  DRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQ 129

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q+H   +K  F  +VFV  +L+++YSK   +  ARK+F  M + D V +N +I  YA
Sbjct: 130 EGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYA 189

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              +   +L+LF E+     +R  F ++ L+  ++    ++  R++  Q      +S   
Sbjct: 190 RCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS--- 242

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
             N++++ Y K G F+ A E+F  +     V W  MI+ Y   G   +A+ +F  M +  
Sbjct: 243 -WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 301

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
                AT  S+L A + LA L  G+ +HS++ ++GF  +   G++L++MYAK G ++ A+
Sbjct: 302 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 361

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ + ++ +  W A+I     +G A   L  F +M ++G +P+++  + VL+AC+H G
Sbjct: 362 TVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAG 421

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+++G QYF+ M  +YK+ P  EHY  +VDILCR+G  +EA+  +  MP  P++++W S+
Sbjct: 422 LVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSL 481

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +   R H  ++  + AA ++ ++        Y+ +SN+YA +G WE VS V++ M +RG 
Sbjct: 482 LGGSRNHGKIDIGEYAAQRVIEVAP-ETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 540

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS-CALHDED 670
           RK    S VE K  +H F   D  HPQT EI  K+  + +++K  G+ PDT+   L  E 
Sbjct: 541 RKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEG 600

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           E+ K   L+ HSERLAIAF LIN   G PI +MKNLR C DCH+  KL+SKI  REI VR
Sbjct: 601 EKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVR 660

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D+ RFHHFK+G CSC D+W
Sbjct: 661 DNCRFHHFKNGSCSCMDYW 679



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 206/442 (46%), Gaps = 14/442 (3%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQF-REAFKLFVDMRTDGGSDPDYVTF 76
           K  +L  AR +F+ +  R+ + W  +I  Y + NQF  +   LF ++  +    PD  T 
Sbjct: 59  KINDLGYARSIFDRIQRRSLIHWNTIIKCYVE-NQFSHDGIVLFHELVHE--YLPDNFTL 115

Query: 77  ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
             ++ GC+      E  Q+H   +K G+ S + +  SLV+ Y K   +D AR+VF  M  
Sbjct: 116 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMID 175

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           KD V +N+LI G+A+ G  + A++LF EM     +   F++   +        +   R++
Sbjct: 176 KDVVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKL 231

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
              +   N V      NA+++ Y K      A +LF +MP  D V++N+MI  Y  N Q+
Sbjct: 232 FDQMPCRNLVS----WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQF 287

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            +++K+F  +       S     ++LS V+    L  GR IH+         +  +  SL
Sbjct: 288 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSL 347

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           ++MYAKCG  E A  +F  +       WTA+I      G    AL LF+EMC+  +  + 
Sbjct: 348 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNA 407

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFK 435
             F  +L A      +  G+Q    ++    +         L+D+  ++G L++A  T +
Sbjct: 408 IIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIE 467

Query: 436 EMP-ERNIVSWNALISACAQNG 456
            MP   N V W +L+     +G
Sbjct: 468 NMPISPNKVIWMSLLGGSRNHG 489



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 199/458 (43%), Gaps = 50/458 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y K G +  AR++F+ M+D+  V W  LI GY++  +   A +LF +M      + 
Sbjct: 153 LVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM-----PER 207

Query: 72  DYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           D  ++  L+ G   C + ++A +L               L+  N++++ Y K    D A 
Sbjct: 208 DAFSWTVLVDGLSKCGKVESARKLFDQMP-------CRNLVSWNAMINGYMKSGDFDSAL 260

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F +MP  D V++N +I G+   G   +A+K+F  M  LG +PS  T  + LSA  GLA
Sbjct: 261 ELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLA 320

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR +H+++ K  F  +  +  +L+++Y+K  C+  A  +F  + +     +  +I 
Sbjct: 321 VLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIV 380

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               +     +L LF E+  T    +   F  +L+   +   +  GRQ     +    I 
Sbjct: 381 GLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIE 440

Query: 309 E-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE-------- 358
             ++    LVD+  + G  EEAK    N+    + V W +++      G ++        
Sbjct: 441 PTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQR 500

Query: 359 ------EALNLFIEMCRANISADQATFASI-----------LRASAELASLSLGKQLHSF 401
                 E +  +I +  +N+ A    +  +            R     +S+     LH F
Sbjct: 501 VIEVAPETIGCYILL--SNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEF 558

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           ++         S     ++YAK   +K+ ++    +P+
Sbjct: 559 IVGD------ISHPQTKEIYAKMSEMKEKLKCVGHVPD 590



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N VS N +I+GY+KSG+  +A ELF  M     V+W ++I GY    QF +A K+F
Sbjct: 235 MPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMF 294

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    GS P + T  ++LS  S      +   +H+ + K G+    I+  SL++ Y K
Sbjct: 295 F-MMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAK 353

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C++ A  VF+ + +K    + A+I G    G+   A+ LF+EM   G KP+   F   
Sbjct: 354 CGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 413

Query: 181 LSA--GVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
           L+A    GL D   GRQ    ++    +E        L+D+  +   + EA+     MP
Sbjct: 414 LNACNHAGLVDD--GRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 470


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 193/438 (44%), Positives = 291/438 (66%), Gaps = 1/438 (0%)

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V N+LVDMYAK G F+ A ++F  ++    + WT++++  V  G+ EEAL LF EM    
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  DQ   A++L A AEL  L  GKQ+H+  ++SG  S++   ++L+ MYAK G ++DA 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  M  +++++W ALI   AQNG  + +L  + BM+ SG +PD ++ + +L ACSH G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+E G  YF SM + Y ++P  EHYA M+D+L RSG   EA++L+ QM  +PD  +W ++
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E  ++AA+ LF++E  ++A PYV +SN+Y+ AG+WE  ++ ++ M+ RGV
Sbjct: 244 LAACRVHGNVELGERAANNLFELEP-KNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            K    SW+E+ SKVH F + D  HP+T EI  K++ +M  +K+ GY PD + ALHD DE
Sbjct: 303 SKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDE 362

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K   L YHSE+LA+AF L+  P G+PI + KNLR C DCH A+K +S +  R + +RD
Sbjct: 363 EGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRD 422

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S+ FHHF++G CSC D+W
Sbjct: 423 SNCFHHFREGACSCSDYW 440



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            V NAL+D+Y+K      A  +F +M + D +S+  ++T    N  Y+E+L+LF E++  
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
                Q   + +LS  A    L+ G+Q+H   + +   S + V NSLV MYAKCG  E+A
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F ++     + WTA+I  Y Q G   E+LN + +M  + +  D  TF  +L A +  
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182

Query: 390 ASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
             +  G+    S     G        + ++D+  +SG L +A +   +M  + +   W A
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242

Query: 448 LISACAQNGDAQ 459
           L++AC  +G+ +
Sbjct: 243 LLAACRVHGNVE 254



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 6/262 (2%)

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           ++ N+LVD Y K    D A  VF++M  KD +S+ +L+TG    G  EEA++LF EM+ +
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G  P     AA LSA   L  +  G+QVHA  +K+    ++ V N+L+ +Y+K  C+ +A
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
            K+F  M   D +++  +I  YA N + +ESL  + ++  +        F  LL   ++ 
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTA 346
             ++ GR           I       + ++D+  + G+  EAKE+   ++       W A
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242

Query: 347 MISAYVQKGNLE----EALNLF 364
           +++A    GN+E     A NLF
Sbjct: 243 LLAACRVHGNVELGERAANNLF 264



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K G    A ++F  M D+  +SWT L+ G      + EA +LF +MR  G 
Sbjct: 5   NNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG- 63

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD +  A +LS C+E        QVHA+ +K G  S L + NSLV  Y K  C++ A 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF  M  +D +++ ALI G+A+ G   E++  + +M   G KP   TF   L A     
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 189 DIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEM 235
            +  GR     + +   ++      A ++DL  +   ++EA++L  +M
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQM 231


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/658 (34%), Positives = 371/658 (56%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G +  A+ LF+ +  R  + W +++ GY +   F  A   F +MR +    P
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR-NSCVKP 276

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + V+F  LLS C+        IQ+H  +I+ G+ S   + N+++  Y K   L  AR++F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MPQ D+V++N LI G+ + G  +EA+ LF  M   G K    TFA+ L + +    + 
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             ++VH+++V+     +V++ +AL+D+Y K   V  A K F +   VD      MI+ Y 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E+L LFR L       +    +++L   A    L++G+++H   +     +  +
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V +S+  MYAK GR + A + F  +    +V W  MI ++ Q G  E A++LF +M  + 
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + ++ L A A   +L  GK+LH FV+R+ F+S+ F  S L+DMY+K G L  A 
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALAR 636

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M  +N VSWN++I+A   +G  +  L  F +MV++G QPD V+ L ++SAC H G
Sbjct: 637 SVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAG 696

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG+ YF  MT++Y +  + EH+A MVD+  R+G   EA   +  MPF PD   W S+
Sbjct: 697 LVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSL 756

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E AK A+  L +++   ++  YV +SN++A AG+WESV +V+  M+E+GV
Sbjct: 757 LGACRLHGNVELAKLASKHLVELDP-NNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGV 815

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           +K+  YSW+++    H+F+A D  HPQ+ EI   ++NL+ E++K GY P     LH +
Sbjct: 816 QKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPLHPQ 873



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 163/549 (29%), Positives = 271/549 (49%), Gaps = 8/549 (1%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T+ + ML   YV   +      LF  +    ++ W  LI G+S    F  A   F  M  
Sbjct: 112 TLGSRML-GMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRML- 169

Query: 66  DGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             GS+  PD  TF  ++  C   +       VH      G++  L I +SL+  Y     
Sbjct: 170 --GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGY 227

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A+ +F E+P +D + +N ++ G+ K G    A+  F EM++   KP+  +F   LS 
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSV 287

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G Q+H  V+++ F  +  VAN ++ +YSK   + +ARK+F  MP+ D V++
Sbjct: 288 CATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTW 347

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  Y  N    E++ LF+ +  +        F++ L  V     L+  +++H+  + 
Sbjct: 348 NGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR 407

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                +V + ++LVD+Y K G  E A + F   + +     TAMIS YV  G   EALNL
Sbjct: 408 HGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNL 467

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  + +  +  +  T AS+L A A LASL LGK+LH  +++ G  +    GS++  MYAK
Sbjct: 468 FRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAK 527

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           SG L  A Q F+ MP ++ V WN +I + +QNG  +  +  F  M  SG + DSVSL + 
Sbjct: 528 SGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSAT 587

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSAC++   +  G +  +    +          ++++D+  + G    A  +   M ++ 
Sbjct: 588 LSACANYPALYYGKE-LHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWK- 645

Query: 544 DEIMWSSVI 552
           +E+ W+S+I
Sbjct: 646 NEVSWNSII 654



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 239/472 (50%), Gaps = 24/472 (5%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+HA ++  G N  L + + ++  Y   R       +F  +    S+ +N LI GF+  G
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             + A+  F  M      P  +TF   + A  GL ++ L + VH       F  ++F+ +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+ LY+ +  + +A+ LF E+P  D + +NVM+  Y  N  +  +L  F+E++ +    
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           +   F  LLSV A +  ++ G Q+H   I +   S+  VAN+++ MY+KCG   +A++IF
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             +    TV W  +I+ YVQ G  +EA+ LF  M  + +  D  TFAS L +  +  SL 
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             K++HS+++R G   +V+  SAL+D+Y K G ++ A +TF++    ++    A+IS   
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYFNS 502
            NG     L  F  ++Q G  P+ +++ SVL AC+           HC ++++GL+    
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +             +S+  +  +SG  D A +   +MP + D + W+ +I S
Sbjct: 517 VG------------SSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVS 555



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 243/474 (51%), Gaps = 14/474 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +I+ Y K GNL  AR++F+ M     V+W  LI GY Q     EA  LF  M T  G 
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTS-GV 375

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D +TFA+ L    +  +     +VH+ I++ G    + + ++LVD Y K   +++A +
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACK 435

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F++    D     A+I+G+   GLN EA+ LF  +   G  P+  T A+ L A   LA 
Sbjct: 436 TFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS 495

Query: 190 IALGRQVHAFVVKTNFVENVF-VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           + LG+++H  ++K   +ENV  V +++  +Y+K   +  A + F  MP  D V +N+MI 
Sbjct: 496 LKLGKELHCDILKKG-LENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIV 554

Query: 249 CYAWNEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
            ++ N + + ++ LFR++    T+FD      S  LS  AN   L  G+++H   +  + 
Sbjct: 555 SFSQNGKPELAIDLFRQMGTSGTKFD--SVSLSATLSACANYPALYYGKELHCFVVRNSF 612

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           IS+  VA++L+DMY+KCG+   A+ +F  +   + V W ++I+AY   G   E L+LF E
Sbjct: 613 ISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHE 672

Query: 367 MCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M  A I  D  TF  I+ A      +  G           G  + +   + ++D+Y ++G
Sbjct: 673 MVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAG 732

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-----SGY 473
            L +A  T K MP   +  +W +L+ AC  +G+ +    + + +V+     SGY
Sbjct: 733 RLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGY 786



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQIH + +V      + + + ++ MY  C  F++   +F  L    ++PW  +I  +   
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G  + AL  F  M  +N++ D+ TF  +++A   L ++ L K +H      GF  ++F G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           S+L+ +Y  +G + DA   F E+P R+ + WN +++   +NGD  + L +F++M  S  +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+SVS + +LS C+  G++  G+Q  + +  +           +++ +  + G   +A K
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQ-LHGLVIRSGFESDPTVANTIITMYSKCGNLFDARK 334

Query: 535 LMAQMPFEPDEIMWSSVI 552
           +   MP + D + W+ +I
Sbjct: 335 IFDIMP-QTDTVTWNGLI 351


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/662 (35%), Positives = 362/662 (54%), Gaps = 42/662 (6%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCK--IRCLDLARRVFKEMPQKDSVSFNALIT 147
           + L QVHA  ++ G+     +  +LV  Y       L+ A +VF+ +P  +   FN +I 
Sbjct: 44  HHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIK 103

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G  +     +AI  + +M     +P+ FT+     A         G QVHA V+K     
Sbjct: 104 GCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSG 163

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           +V + +A + +Y     V  AR++ GE    D + +N MI  Y    + + + +LF  ++
Sbjct: 164 DVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSME 223

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                                 D  +G                   N +V   AKCG  E
Sbjct: 224 ----------------------DKNVGSW-----------------NVMVSGMAKCGMIE 244

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           EA+E+F  +   + + W+AMI  Y++ G  +EAL +F  M R  I   +   +S+L A A
Sbjct: 245 EARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACA 304

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
            L +L  G+ +H++V  +    +   G+AL+DMYAK G L  A   F++M ++ + +WNA
Sbjct: 305 NLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNA 364

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I     +G A+  ++ F  M +  ++P+ ++LL VLSAC+H G+++EGL+ FNSM + Y
Sbjct: 365 MICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVY 424

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            + P  EHY  +VD+L R+G   EAE++M  MP EP   +W +++ +CR H ++E  ++ 
Sbjct: 425 GIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERV 484

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
              L ++E  +++  Y  +SNIYA AG+W+ V+ V+K M+ERGV+  T  S ++    VH
Sbjct: 485 GKILLELEP-QNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVH 543

Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
            F   D  HPQ   I   ++N+++ +K EG+ P+TS  L D +EE K   L+YHSE+LAI
Sbjct: 544 EFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAI 603

Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
           AF LINT  G+ I V+KNLR C DCH+A KLIS++  REI VRD +R+HHFK G CSC+D
Sbjct: 604 AFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKD 663

Query: 748 FW 749
           FW
Sbjct: 664 FW 665



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 158/337 (46%), Gaps = 45/337 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M ++N  S N+++SG  K G +  ARELFN M ++  +SW+ +I GY +   ++EA ++F
Sbjct: 222 MEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +    P     +++L+ C+     ++   +HA +     +   ++  +LVD Y K
Sbjct: 282 NVMQRE-EIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAK 340

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD+A  VF++M +K+  ++NA+I G    G  E+AI+LF +MQ   F+P+  T    
Sbjct: 341 CGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGV 400

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA      +  G ++       N +E V+     ++ Y    CVV+     G + E + 
Sbjct: 401 LSACAHSGMVDEGLRIF------NSMEEVYGIEPGMEHYG---CVVDLLGRAGLLGEAEE 451

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V Y++ +                        + S   +  LL       D+++G +    
Sbjct: 452 VMYSMPM------------------------EPSAAVWGALLGACRKHGDVELGER---- 483

Query: 301 TIVTTAISEVKVANS-----LVDMYAKCGRFEEAKEI 332
             V   + E++  NS     L ++YA+ GR+++   +
Sbjct: 484 --VGKILLELEPQNSGRYALLSNIYARAGRWDDVANV 518



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 177/402 (44%), Gaps = 65/402 (16%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           NL  A ++F  + +     + I+I G  Q N+  +A   +  M     + P+  T+ TL 
Sbjct: 79  NLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMI-AHARPNKFTYPTLF 137

Query: 81  SGCSEPDTANELIQVHADIIKFGY-------------------------------NSILI 109
             C+  + A E +QVHA +IK G                                NS +I
Sbjct: 138 KACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVI 197

Query: 110 ICNSLVDSYCKI-----------------------------RC--LDLARRVFKEMPQKD 138
             N+++D Y K                              +C  ++ AR +F EM +K+
Sbjct: 198 CFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKN 257

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            +S++A+I G+ K G  +EA+++F  MQ    +P  F  ++ L+A   L  +  GR +HA
Sbjct: 258 EISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHA 317

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           +V   +   +  +  AL+D+Y+K   +  A  +F +M + +  ++N MI     + + ++
Sbjct: 318 YVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAED 377

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLV 317
           +++LF ++Q  +F  +      +LS  A+   +  G +I         I   ++    +V
Sbjct: 378 AIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVV 437

Query: 318 DMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
           D+  + G   EA+E+  ++    S   W A++ A  + G++E
Sbjct: 438 DLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVE 479


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/777 (31%), Positives = 401/777 (51%), Gaps = 76/777 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K   +  A ++F+    +    W  ++    +  ++ +A +L   M++      
Sbjct: 172 LINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKAT 231

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   LL  C +    NE  Q+H  +I+FG  S   ICNS+V  Y +   L+LAR VF
Sbjct: 232 D-GTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVF 290

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-----------------HL------ 168
                 +  S+N++I+ +A  G    A  LF EM+                 HL      
Sbjct: 291 DSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYE 350

Query: 169 ------------GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
                       GFKP   +  +AL A + L    LG+++H +++++    +V+V  +L+
Sbjct: 351 NVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV 410

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+Y K+DC+ +A  +F      +  ++N +I+ Y +                  FD    
Sbjct: 411 DMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYK---------------GLFDN--- 452

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
                    A KL +Q+  +     +VT         NSLV  Y+  G  EEA  +   +
Sbjct: 453 ---------AEKLLIQMKEEGIKADLVTW--------NSLVSGYSMSGCSEEALAVINRI 495

Query: 337 SHISTVP----WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
             +   P    WTAMIS   Q  N  +AL  F +M   N+  +  T +++LRA A  + L
Sbjct: 496 KSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLL 555

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             G+++H F ++ GF+ +++  +AL+DMY+K G LK A + F+ + E+ +  WN ++   
Sbjct: 556 KKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A  G  +     F++M ++G +PD+++  ++LS C + GL+ +G +YF+SM   Y + P 
Sbjct: 616 AIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPT 675

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY+ MVD+L ++G  DEA   +  MP + D  +W +V+ +CR+HK+++ A+ AA  LF
Sbjct: 676 IEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLF 735

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           ++E   ++A YV M NIY+   +W  V ++K++M   GV+    +SW++++  +HVF+  
Sbjct: 736 RLEPY-NSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTE 794

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
            + HP+  EI   +  L+ E+KK GY PDT+C   + D+  K + L  H+E+LA+ + L+
Sbjct: 795 GKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLM 854

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
               G+PI V+KN R C DCH A K IS    REI +RD  RFHHF +G CSC D W
Sbjct: 855 KIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 154/636 (24%), Positives = 281/636 (44%), Gaps = 66/636 (10%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN-SLVDSYCKIRCLDLA 127
           S P +  F   L G     T N + ++HA +IK      L+  + S++ +Y +    + A
Sbjct: 27  SSPKFSPFFHPLGGIR---TLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESA 83

Query: 128 RRVFKEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            +VF     ++ + +N+ +  FA   G + E +++F E+   G K         L   + 
Sbjct: 84  TKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLA 143

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L ++ LG +VHA ++K  F  +V ++ AL++LY K   +  A ++F E P  +   +N +
Sbjct: 144 LMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTI 203

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +     +E+++++L+L R +Q      +      LL        L  G+QIH   I    
Sbjct: 204 VMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGR 263

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +S   + NS+V MY++  R E A+ +F +    +   W ++IS+Y   G L  A +LF E
Sbjct: 264 VSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFRE 323

Query: 367 MCRANISADQATFASI-----------------------------------LRASAELAS 391
           M  ++I  D  T+ S+                                   L+A  EL  
Sbjct: 324 MESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGY 383

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
            +LGK++H +++RS    +V+  ++L+DMY K+  L+ A   F     +NI +WN+LIS 
Sbjct: 384 FNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISG 443

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
               G      K    M + G + D V+  S++S  S  G  EE L   N + +   L P
Sbjct: 444 YTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRI-KSLGLTP 502

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAA 568
               + +M+   C++  + +A +  +QM  E   P+    S+++ +C         KK  
Sbjct: 503 NVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRAC---AGPSLLKKGE 559

Query: 569 D-QLFKMEK--LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK 625
           +   F M+   + D     A+ ++Y+  G+ +   +V + ++E+     T   W  +   
Sbjct: 560 EIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEK-----TLPCWNCMMMG 614

Query: 626 VHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
             ++   +E           +  L   M K G +PD
Sbjct: 615 YAIYGHGEE-----------VFTLFDNMCKTGIRPD 639



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 8/237 (3%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           V+ N L+SGY  SG    A  + N +    +    VSWT +I G  Q   + +A + F  
Sbjct: 470 VTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQ 529

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ +    P+  T +TLL  C+ P    +  ++H   +K G+   + I  +L+D Y K  
Sbjct: 530 MQEEN-VKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGG 588

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L +A  VF+ + +K    +N ++ G+A  G  EE   LF  M   G +P   TF A LS
Sbjct: 589 KLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLS 648

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVAN--ALLDLYSKHDCVVEARKLFGEMPE 237
            G   + + +    +   +KT++  N  + +   ++DL  K   + EA      MP+
Sbjct: 649 -GCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQ 704


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/746 (34%), Positives = 391/746 (52%), Gaps = 62/746 (8%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V+ +  IS   + G +  AR+ F+S+  +   SW  ++ GY      +EA +LF +M   
Sbjct: 18  VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--- 74

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
             S+ + V++                                   N LV  Y K R +  
Sbjct: 75  --SERNVVSW-----------------------------------NGLVSGYIKNRMIVE 97

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF+ MP+++ VS+ A++ G+ +EG+  EA  LF  M           F   +  G  
Sbjct: 98  ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG-- 155

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              I   R+++  +     V++V  +  ++    +   V EAR +F EM E + V++  M
Sbjct: 156 --RIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--TQTIVT 304
           IT Y  N +   + KLF  +          P  T +S  +  L   +  +I    +    
Sbjct: 210 ITGYRQNNRVDVARKLFEVM----------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
             +  V   N+++  + + G   +A+ +F  +       W  MI AY +KG   EAL+LF
Sbjct: 260 MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M +  +     +  SIL   A LASL  G+Q+H+ ++R  F  +V+  S L+ MY K 
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC 379

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G L  A   F     ++I+ WN++IS  A +G  +  LK F +M  SG  P+ V+L+++L
Sbjct: 380 GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACS+ G +EEGL+ F SM  K+ + P  EHY+  VD+L R+G  D+A +L+  M  +PD
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W +++ +C+ H  L+ A+ AA +LF+ E   +A  YV +S+I A   +W  V+ V+K
Sbjct: 500 ATVWGALLGACKTHSRLDLAEVAAKKLFENEP-DNAGTYVLLSSINASRSKWGDVAVVRK 558

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            MR   V K    SW+E+  KVH+FT    + HP+   I   +E     +++ GY PD S
Sbjct: 559 NMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCS 618

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD DEE KV+SL  HSERLA+A+ L+  PEG PI VMKNLR C DCHAAIKLISK+T
Sbjct: 619 HVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVT 678

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI +RD++RFHHF +G CSCRD+W
Sbjct: 679 EREIILRDANRFHHFNNGECSCRDYW 704



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 235/498 (47%), Gaps = 41/498 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N VS N L+SGY+K+  +  AR +F  M +R  VSWT ++ GY Q+    EA  LF
Sbjct: 74  MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +  G  +    ++  +++ D++       ++   +++   C+
Sbjct: 134 WRM-----PERNEVSWTVMFGGLIDDGRIDKARKLY-DMMPV---KDVVASTNMIGGLCR 184

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D AR +F EM +++ V++  +ITG+ +    + A KLF  M     + ++ ++ + 
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSM 240

Query: 181 LSAGVGLADIALGRQVHA---FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           L     L     GR   A   F V    ++ V   NA++  + +   + +AR++F  M +
Sbjct: 241 L-----LGYTLSGRIEDAEEFFEVMP--MKPVIACNAMIVGFGEVGEISKARRVFDLMED 293

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQ 296
            D  ++  MI  Y       E+L LF ++Q  +  R  FP   ++LSV A    LQ GRQ
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSVCATLASLQYGRQ 352

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H   +      +V VA+ L+ MY KCG   +AK +F   S    + W ++IS Y   G 
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGS 415
            EEAL +F EM  +    ++ T  +IL A +    L  G ++  S   +      V   S
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYS 472

Query: 416 ALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQ----ATLKSFEDM 468
             +DM  ++G +  A++  + M   P+  +  W AL+ AC  +        A  K FE+ 
Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALLGACKTHSRLDLAEVAAKKLFEN- 529

Query: 469 VQSGYQPDSVSLLSVLSA 486
                +PD+     +LS+
Sbjct: 530 -----EPDNAGTYVLLSS 542



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 220/458 (48%), Gaps = 41/458 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ V++  +I G  + G +  AR +F+ M +R  V+WT +I GY Q N+   A KLF
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      +   V++ ++L G     T +  I+   +  +      +I CN+++  + +
Sbjct: 227 EVM-----PEKTEVSWTSMLLGY----TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGE 277

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
           +  +  ARRVF  M  +D+ ++  +I  + ++G   EA+ LF +MQ  G +PS  +  + 
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS    LA +  GRQVHA +V+  F ++V+VA+ L+ +Y K   +V+A+ +F      D 
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--ANKLD--LQIGRQ 296
           + +N +I+ YA +   +E+LK+F E+  +    ++     +L+    A KL+  L+I   
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           + ++  VT  +         VDM  + G+ ++A E+  +++       W A++ A     
Sbjct: 458 MESKFCVTPTVEHYSCT---VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514

Query: 356 NLEEA--------------LNLFIEMCRANISADQATFASILRASAELASLS-------- 393
            L+ A                 ++ +   N S  +    +++R +    ++S        
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574

Query: 394 -LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +GK++H F  R G  ++      L+ +    G L++A
Sbjct: 575 EVGKKVHMFT-RGGIKNHPEQAMILMMLEKTDGLLREA 611



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 23/252 (9%)

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           K+L   + R+   S   + S  +   ++ G + +A + F  +  + I SWN+++S    N
Sbjct: 2   KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G  +   + F++M +     + VS   ++S      +I E    F  M ++  +      
Sbjct: 62  GLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV-----S 112

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS----SVINSCRIHKNLEFAKKAADQL 571
           + +MV    + G   EAE L  +MP E +E+ W+     +I+  RI K        A +L
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDGRIDK--------ARKL 163

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK-VTAYSWVELKSKVHVFT 630
           + M  ++D      M       G+ +    +   MRER V    T  +     ++V V  
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223

Query: 631 ANDELHPQTNEI 642
              E+ P+  E+
Sbjct: 224 KLFEVMPEKTEV 235


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/628 (37%), Positives = 361/628 (57%), Gaps = 7/628 (1%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + L  R F   P     +F   I+     G  +EA+   +EM  LG +     + A L+A
Sbjct: 5   MRLIHRSFSSSPNSVLQTFRP-ISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDALLNA 60

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            +    +  G++VHA ++KT ++   ++   LL  Y K DC+ +ARK+  EMPE + VS+
Sbjct: 61  CLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 120

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MI+ Y+      E+L +F E+  +    ++F F+T+L+       L +G+QIH   + 
Sbjct: 121 TAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVK 180

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S + V +SL+DMYAK G+ EEA+EIF  L     V  TA+I+ Y Q G  EEAL +
Sbjct: 181 WNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 240

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  +    +  +  T+AS+L A + LA L  GKQ H  V+R          ++L+DMY+K
Sbjct: 241 FQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 300

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLS 482
            G+L  A + F  MPER  +SWNA++   +++G  +  L+ F  M  +   +PD+V+LL+
Sbjct: 301 CGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 360

Query: 483 VLSACSHCGLIEEGLQYFNSMTQ-KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           VLS CSH  + + GL  ++ M   +Y ++P  EHY  +VD+L R+G  DEA + + +MP 
Sbjct: 361 VLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 420

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +P   +  S++ +CR+H +++  +    +L ++E   +A  YV +SN+YA AG+WE V+ 
Sbjct: 421 KPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEP-ENAGNYVILSNLYASAGRWEDVNN 479

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+  M ++ V K    SW++ +  +H F AND  HP+  E+  K++ +  +MK+ GY PD
Sbjct: 480 VRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPD 539

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            SC L+D DEE K + L  HSE+LA+ F LI T EG PI V KNLR C DCH   K+ SK
Sbjct: 540 ISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSK 599

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  RE+++RD +RFH    G CSC D+W
Sbjct: 600 VFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 202/389 (51%), Gaps = 4/389 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  +  LL+ C +     E  +VHA +IK  Y     +   L+  Y K  CL+ A
Sbjct: 46  GPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 105

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+V  EMP+K+ VS+ A+I+ +++ G + EA+ +F EM     KP++FTFA  L++ +  
Sbjct: 106 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRA 165

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           + +ALG+Q+H  +VK N+  ++FV ++LLD+Y+K   + EAR++F  +PE D VS   +I
Sbjct: 166 SGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAII 225

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA     +E+L++F+ LQ      +   +++LL+ ++    L  G+Q H   +     
Sbjct: 226 AGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 285

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
               + NSL+DMY+KCG    A+ +F N+   + + W AM+  Y + G   E L LF  M
Sbjct: 286 FYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 345

Query: 368 C-RANISADQATFASILRASAELASLSLGKQLHSFVIRS--GFMSNVFSGSALLDMYAKS 424
                +  D  T  ++L   +       G  ++  ++    G   +      ++DM  ++
Sbjct: 346 RDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRA 405

Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISAC 452
           G + +A +  K MP +       +L+ AC
Sbjct: 406 GRIDEAFEFIKRMPSKPTAGVLGSLLGAC 434



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 201/382 (52%), Gaps = 29/382 (7%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRT 65
           + T +LI  Y K   L  AR++ + M ++  VSWT +I  YSQ     EA  +F + MR+
Sbjct: 88  LRTRLLIF-YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRS 146

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           DG   P+  TFAT+L+ C          Q+H  I+K+ Y+S + + +SL+D Y K   ++
Sbjct: 147 DG--KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIE 204

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F+ +P++D VS  A+I G+A+ GL+EEA+++F  +Q  G +P+  T+A+ L+A  
Sbjct: 205 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALS 264

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GLA +  G+Q H  V++        + N+L+D+YSK   +  A++LF  MPE   +S+N 
Sbjct: 265 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNA 324

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA----NKLDLQIGRQIHTQT 301
           M+  Y+ +   +E L+LFR ++  +  R +    TLL+V++     K++   G  I+   
Sbjct: 325 MLVGYSKHGLGREVLELFRLMRDEK--RVKPDAVTLLAVLSGCSHGKME-DTGLSIYDGM 381

Query: 302 IVT--TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           +        + +    +VDM  + GR +EA   F  +  + + P   ++ +         
Sbjct: 382 VAGEYGIKPDTEHYGCIVDMLGRAGRIDEA---FEFIKRMPSKPTAGVLGS--------- 429

Query: 360 ALNLFIEMCRANISADQATFAS 381
                +  CR ++S D   +  
Sbjct: 430 ----LLGACRVHLSVDIGEYVG 447


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/676 (34%), Positives = 382/676 (56%), Gaps = 19/676 (2%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           + +L++ C+   +   L  +H  I+K G +      + L+D Y K   +  AR++F EMP
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +  V++N++I+     G  +EAI+L+  M   G  P  +TF+A   A   +     G++
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 196 VHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
            H   V   F V + FVA  ++D+Y+K   + +AR +F  + + D V +  +I  Y  + 
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182

Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
              E+L++F ++  +R   +++  +++L    N  DL  G+ IH   +     S V    
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY+KC   E++ ++F +L++ S V WT+ I   VQ G  E AL++F EM R +IS 
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISP 302

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  T +SIL A + LA L  G+Q+H+  ++ G   N F  +AL+ +Y K G+++ A   F
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVF 362

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             + E +IVS N +I A AQNG     L+ FE + + G +P+ V+ +S+L AC++ GL+E
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG Q F+ +   + +   ++HY  M+D+L R+  F+EA  L+ +    PD I W +++N+
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNA 481

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C+IH  +E A+K   ++   +  RD   ++ ++NIYA AG+W++V ++K A R+  ++K 
Sbjct: 482 CKIHGEVEMAEKFMKKMLD-QAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKT 540

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SWV++  +VH F A D  HP+ +EI   +  L++++   GY PDT   L D +EE K
Sbjct: 541 PAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKK 600

Query: 675 VESLKYHSERLAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSS 733
           + +L YHSE+LAIAFAL  T  + + I + KNLR C D               I  RD+ 
Sbjct: 601 ISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGD--------------YIIARDAK 646

Query: 734 RFHHFKDGFCSCRDFW 749
           RFHHFK G CSC+D+W
Sbjct: 647 RFHHFKGGICSCKDYW 662



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 232/473 (49%), Gaps = 5/473 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI GY+K   +  AR+LF+ M +R  V+W  +I  +  + + +EA +L+ +M  + G  P
Sbjct: 41  LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFE-GVLP 99

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLDLARRV 130
           D  TF+ +    SE   + E  + H   +  G+  S   +   +VD Y K   +  AR V
Sbjct: 100 DAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFV 159

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F  +  KD V F ALI G+ + GL+ EA+++F +M     KP+++T A+ L +   L D+
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDL 219

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+ +H  VVK      V    +LL +YSK + V ++ K+F  +     V++   I   
Sbjct: 220 VNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGL 279

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N + + +L +FRE+       + F  S++L   ++   L+ G QIH  T+        
Sbjct: 280 VQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK 339

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+ +Y KCG  E+A+ +F +L+ +  V    MI AY Q G   EAL LF  + + 
Sbjct: 340 FVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKL 399

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLK 428
            +  +  TF SIL A      +  G Q+ S +IR+     +     + ++D+  ++   +
Sbjct: 400 GLEPNVVTFISILLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFE 458

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           +A    +E    +++ W  L++AC  +G+ +   K  + M+    +     +L
Sbjct: 459 EATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHIL 511



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           S   L++ Y K   +  + ++FNS+   + V+WT  I G  Q  +   A  +F +M    
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCS 299

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            S P++ T +++L  CS         Q+HA  +K G +    +  +L+  Y K   ++ A
Sbjct: 300 IS-PNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKA 358

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  + + D VS N +I  +A+ G   EA++LF  ++ LG +P+  TF + L A    
Sbjct: 359 RSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNA 418

Query: 188 ADIALGRQVHAFVVKTNFVE 207
             +  G Q+ + +   + +E
Sbjct: 419 GLVEEGCQIFSLIRNNHSIE 438


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/566 (38%), Positives = 344/566 (60%), Gaps = 13/566 (2%)

Query: 193 GRQVHAFVVKTN-FVENVFVANALLDLYSKHDCV--VEARKLFGEMPEVDGVSYNVMITC 249
           GRQ+H   +++  F  + + A+ALL +Y  H C   ++AR+ F E+P  + V    M + 
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMY--HHCFRPLDARRAFDEIPTPNPVIVTAMASG 164

Query: 250 YAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
              N     +L +FR +  +       +      LS  A   D  I   IH         
Sbjct: 165 CMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLD 224

Query: 308 SEVKVANSLVDMYAKCGRFE--EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            +  VAN+++D YAK G  +   A+++F ++     V W  MI+ Y Q G   EAL L+ 
Sbjct: 225 GQTGVANTIIDAYAKGGGHDLGAARKLF-DMMDRDVVSWNTMIALYAQNGLSTEALGLYS 283

Query: 366 EM--CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           +M     ++  +  T +++L A A   ++  GK++H+ V+R G   NV+ G++++DMY+K
Sbjct: 284 KMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSK 343

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++ A + F+++  +NI+SW+A+I+    +G  Q  L  F DM +SG +P+ ++ ++V
Sbjct: 344 CGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITV 403

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L+ACSH GL+ EG  ++N+M  ++ + P  EHY  MVD+L R+GC DEA  L+ +M  +P
Sbjct: 404 LAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 463

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D  +W +++++CRI+KN+E AK  A++LF+++   ++  YV +SNIYA AG W+ V +++
Sbjct: 464 DAALWGALLSACRIYKNVELAKICAERLFELDA-TNSGYYVLLSNIYAEAGMWKEVERMR 522

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
             ++ RG+ K   YS VELK K H+F   D+ HPQ  EI   +E L++ +   GY P+T 
Sbjct: 523 VLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTG 582

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             LHD D E +   L+ HSE+LA+AFAL+N+ +GS I V+KNLR CTDCHAAIK+I+K+T
Sbjct: 583 SVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLT 642

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
           GREI +RD  RFHHFKDG CSC D+W
Sbjct: 643 GREIIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 7/238 (2%)

Query: 3   NQNTVSTNMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +  T   N +I  Y K G  +L  AR+LF+ M+DR  VSW  +I  Y+Q     EA  L+
Sbjct: 224 DGQTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLY 282

Query: 61  VDMRTDGGS-DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
             M   GG    + VT + +L  C+         ++H  +++ G    + +  S+VD Y 
Sbjct: 283 SKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYS 342

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   +++A + F+++  K+ +S++A+I G+   G  +EA+ +F +M+  G KP+  TF  
Sbjct: 343 KCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFIT 402

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNF-VE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
            L+A      ++ GR  +   +KT F +E  V     ++DL  +  C+ EA  L  EM
Sbjct: 403 VLAACSHAGLLSEGRYWYN-TMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEM 459



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 138/272 (50%), Gaps = 7/272 (2%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKE 152
           +HA + K G +    + N+++D+Y K    DL  AR++F +M  +D VS+N +I  +A+ 
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLF-DMMDRDVVSWNTMIALYAQN 272

Query: 153 GLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           GL+ EA+ L+ +M  +G   + +  T +A L A      I  G+++H  VV+    +NV+
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V  +++D+YSK   V  A K F ++   + +S++ MI  Y  +   +E+L +F +++ + 
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEA 329
              +   F T+L+  ++   L  GR  +        I   V+    +VD+  + G  +EA
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEA 452

Query: 330 KEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
             +   +        W A++SA     N+E A
Sbjct: 453 YGLIKEMKVKPDAALWGALLSACRIYKNVELA 484



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 3/145 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N      ++  Y K G +  A + F  +  +  +SW+ +I GY      +EA  +F DMR
Sbjct: 330 NVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMR 389

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRC 123
             G   P+Y+TF T+L+ CS     +E    +  +  +FG    +     +VD   +  C
Sbjct: 390 KSG-LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGC 448

Query: 124 LDLARRVFKEMPQK-DSVSFNALIT 147
           LD A  + KEM  K D+  + AL++
Sbjct: 449 LDEAYGLIKEMKVKPDAALWGALLS 473


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/613 (35%), Positives = 348/613 (56%), Gaps = 5/613 (0%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S  +N  +   AK     +A+ L+ +M   G +P+ FTF  AL +   L+   LG Q H 
Sbjct: 14  STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE--MPEVDGVSYNVMITCYAWNEQY 256
            + K   V   FV   L+ +Y K   V  ARK+F E        V YN +++ Y  N + 
Sbjct: 74  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            E++ LFR++       +      L+    + ++L++G  +H  T+     S+V V N  
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 193

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           + MY KCG    A+++F  +     + W AM+S Y Q G     L L+  M    +  D 
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 253

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T   +L + A L + S+G ++   +  SGF SN F  +AL++MYA+ G+L  A   F  
Sbjct: 254 VTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 313

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           MPER +VSW A+I     +G  +  ++ F++M++SG +PD  + + VLSACSH GL ++G
Sbjct: 314 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG 373

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           L+YF  M + Y+L P  EHY+ MVD+L R+G   EA+ L+  MP +PD  +W +++ +C+
Sbjct: 374 LEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACK 433

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IHKN+E A+ A +++ ++E   +   YV +SNIY+ A   + V +++  M+E+ ++K   
Sbjct: 434 IHKNVELAELAFERVIELEP-ENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 492

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            S+VELK +VH F   D  H Q++EI R +E L   + +E  KP+      +E  +    
Sbjct: 493 CSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFT 550

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            +  HSE+LA+AF L+NT  G+ ++++KNLR C DCH   K++SKI  R++TVRD++RFH
Sbjct: 551 RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFH 610

Query: 737 HFKDGFCSCRDFW 749
           HF++G CSC+D+W
Sbjct: 611 HFRNGSCSCKDYW 623



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 225/493 (45%), Gaps = 9/493 (1%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           +  W   +   +++ QF +A  L+  M   G   P+  TF   L  C+         Q H
Sbjct: 14  STPWNTQLRELAKRCQFLQALSLYPQMLRHG-DRPNAFTFPFALKSCAALSLPILGSQFH 72

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE--MPQKDSVSFNALITGFAKEGL 154
             I K G      +   L+  YCK   +D AR+VF+E    +K +V +NAL++G+     
Sbjct: 73  GQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSK 132

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             EA+ LF +M   G   +  T    + A V   ++ LG  +H   +K  F  +V V N 
Sbjct: 133 CSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC 192

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
            + +Y K   V  A+KLF EMP    +S+N M++ YA N      L+L+R +        
Sbjct: 193 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPD 252

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
                 +LS  AN     +G ++  +   +   S   + N+L++MYA+CG   +A+ +F 
Sbjct: 253 PVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 312

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   + V WTA+I  Y   G+ E A+ LF EM R+ I  D   F  +L A +       
Sbjct: 313 GMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQ 372

Query: 395 GKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G +    + R+          S ++D+  ++G LK+A    + MP + +   W AL+ AC
Sbjct: 373 GLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 432

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             + + +    +FE +++   +P+++    +LS         +G+     M ++ KL  K
Sbjct: 433 KIHKNVELAELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL--K 488

Query: 513 KEHYASMVDILCR 525
           K+   S V++  R
Sbjct: 489 KDPGCSYVELKGR 501



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 9/244 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N  I+ Y+K G++  A++LF+ M  +  +SW  ++ GY+Q        +L+ +M  + G
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN-G 248

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD VT   +LS C+     +   +V   I   G+ S   + N+L++ Y +   L  A+
Sbjct: 249 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQ 308

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVG 186
            VF  MP++  VS+ A+I G+   G  E A++LF EM   G +P    F   LSA    G
Sbjct: 309 AVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 368

Query: 187 LADIALGRQVHAFVVKTNFVENVFVAN--ALLDLYSKHDCVVEARKLFGEMP-EVDGVSY 243
           L D  L    +  ++K N+       +   ++DL  +   + EA+ L   MP + DG  +
Sbjct: 369 LTDQGL---EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425

Query: 244 NVMI 247
             ++
Sbjct: 426 GALL 429



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y + GNL  A+ +F+ M +RT VSWT +IGGY        A +LF +M 
Sbjct: 287 NPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM- 345

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
              G +PD   F  +LS CS     ++ ++
Sbjct: 346 IRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375


>gi|302776458|ref|XP_002971391.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
 gi|300160523|gb|EFJ27140.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
          Length = 598

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/574 (37%), Positives = 346/574 (60%), Gaps = 6/574 (1%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +AA L       ++  G++VH  + +  +    F+ N L+ +Y K   + +A   F  + 
Sbjct: 30  YAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKCSSIDDAALAFDSIR 89

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + D  S+N+MI  +A N     ++ +F  ++  R  R++    T ++V+A  LDL+ G++
Sbjct: 90  KKDLFSWNIMIAAFAENGCLDRAVGVFELMEPARIKRNR---GTFVAVLAAGLDLEQGKK 146

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH     +       VA +L+ MY  CG  ++A+++F  +  +  V W AMI+AYVQ   
Sbjct: 147 IHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDR 206

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GS 415
             EAL +F  +    +  ++ T+ + L A A LA  S G+ LH  V  +G +   F   +
Sbjct: 207 GREALEIFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVAN 266

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L++MY KSG+L+ A + F+ MP R+I SWN L++    NG     +  F +    G++P
Sbjct: 267 SLINMYGKSGNLEAAEEIFESMPSRDISSWNVLLTVYGHNGLGDLAVDRFTESCLEGFEP 326

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           DS++ L+VL ACSH GL++ G++   S+ + + + P + HY  +VD+L RSG    AE L
Sbjct: 327 DSITFLAVLQACSHAGLLDTGVELLVSIQEDWGIDPTQYHYLCVVDLLGRSGELVRAEAL 386

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MPFEP+E  W S++  CR++ ++   ++A  +L  M +  D++PYV M+NIYA    
Sbjct: 387 INSMPFEPEEGAWRSLLGGCRVNSDVGRGERATQRLLVMSE--DSSPYVLMANIYASIRN 444

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           ++   +++  M +R V+K    SW+E++ ++H F AND+LH +  EI   ++ L  E+++
Sbjct: 445 FDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEIYAGLDRLFVELQR 504

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
           EGY+PDT  AL+D +EE KV  L +HSE+LAI F L++TP+GSP+ V+KNLR C DCHAA
Sbjct: 505 EGYRPDTRVALYDVEEEKKVRMLLHHSEKLAIMFGLMSTPDGSPLFVLKNLRVCADCHAA 564

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            K+I+KIT R+I +RD+SRFHHF++G CSC D+W
Sbjct: 565 TKIIAKITKRKIVMRDASRFHHFENGKCSCCDYW 598



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 186/385 (48%), Gaps = 6/385 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A LL  C+      +  +VH  + ++GY +   + N LV  Y K   +D A   F  + 
Sbjct: 30  YAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKCSSIDDAALAFDSIR 89

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +KD  S+N +I  FA+ G  + A+ +F  M+    K +  TF A L+AG+   D+  G++
Sbjct: 90  KKDLFSWNIMIAAFAENGCLDRAVGVFELMEPARIKRNRGTFVAVLAAGL---DLEQGKK 146

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V  +    N  VA ALL +Y       +AR++F ++P++D V +N MIT Y  N++
Sbjct: 147 IHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDR 206

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ-TIVTTAISEVKVAN 314
            +E+L++F  L+      ++  +   L   A       GR +H + +     ++  KVAN
Sbjct: 207 GREALEIFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVAN 266

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL++MY K G  E A+EIF ++       W  +++ Y   G  + A++ F E C      
Sbjct: 267 SLINMYGKSGNLEAAEEIFESMPSRDISSWNVLLTVYGHNGLGDLAVDRFTESCLEGFEP 326

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           D  TF ++L+A +    L  G +L   +    G     +    ++D+  +SG L  A   
Sbjct: 327 DSITFLAVLQACSHAGLLDTGVELLVSIQEDWGIDPTQYHYLCVVDLLGRSGELVRAEAL 386

Query: 434 FKEMP-ERNIVSWNALISACAQNGD 457
              MP E    +W +L+  C  N D
Sbjct: 387 INSMPFEPEEGAWRSLLGGCRVNSD 411



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 3/277 (1%)

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           ++L   RF  +   ++ LL   AN+ +L  G+++H         +E  + N LV MY KC
Sbjct: 16  KDLGQERFCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKC 75

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              ++A   F ++       W  MI+A+ + G L+ A+ +F  M  A I  ++ TF ++L
Sbjct: 76  SSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVGVFELMEPARIKRNRGTFVAVL 135

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A  +L     GK++H  V  SG   N    +ALL MY   GS  DA Q F+++P+ ++V
Sbjct: 136 AAGLDLEQ---GKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLV 192

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WNA+I+A  QN   +  L+ F  +   G + + V+ L+ L AC+   +  EG      +
Sbjct: 193 CWNAMITAYVQNDRGREALEIFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRV 252

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           ++   L    +   S++++  +SG  + AE++   MP
Sbjct: 253 SEAGLLLTSFKVANSLINMYGKSGNLEAAEEIFESMP 289



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 210/489 (42%), Gaps = 43/489 (8%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N+L+  Y K  ++  A   F+S+  +   SW I+I  +++      A  +F ++  
Sbjct: 62  TFLGNLLVQMYGKCSSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVGVF-ELME 120

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                 +  TF  +L+   + +      ++H  +   G     ++  +L+  Y      D
Sbjct: 121 PARIKRNRGTFVAVLAAGLDLEQGK---KIHDSVHSSGLERNEMVATALLSMYGACGSTD 177

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR+VF+++P+ D V +NA+IT + +     EA+++F  ++  G K ++ T+ AAL A  
Sbjct: 178 DARQVFEQVPKLDLVCWNAMITAYVQNDRGREALEIFHRLEMEGVKCNEVTYLAALDACA 237

Query: 186 GLADIALGRQVHAFVVKTNFVENVF-VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            LA  + GR +H  V +   +   F VAN+L+++Y K   +  A ++F  MP  D  S+N
Sbjct: 238 CLAVQSEGRSLHKRVSEAGLLLTSFKVANSLINMYGKSGNLEAAEEIFESMPSRDISSWN 297

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           V++T Y  N     ++  F E     F+     F  +L   ++   L  G ++       
Sbjct: 298 VLLTVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQACSHAGLLDTGVELLVSIQED 357

Query: 305 TAISEVKVAN-SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
             I   +     +VD+  + G    A+ +      I+++P+             E A   
Sbjct: 358 WGIDPTQYHYLCVVDLLGRSGELVRAEAL------INSMPFEPE----------EGAWRS 401

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            +  CR N    +       RA+  L  L + +    +V+    M+N+++     D+  +
Sbjct: 402 LLGGCRVNSDVGRGE-----RATQRL--LVMSEDSSPYVL----MANIYASIRNFDLAER 450

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS--------FEDMVQSGYQP 475
             S+  A +  K+ P  + +     I   A N    A  +         F ++ + GY+P
Sbjct: 451 LRSVM-ADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEIYAGLDRLFVELQREGYRP 509

Query: 476 DS-VSLLSV 483
           D+ V+L  V
Sbjct: 510 DTRVALYDV 518



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 4/192 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N +    L+S Y   G+   AR++F  +     V W  +I  Y Q ++ REA ++F  +
Sbjct: 158 RNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDRGREALEIFHRL 217

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIR 122
             + G   + VT+   L  C+     +E   +H  + + G   +   + NSL++ Y K  
Sbjct: 218 EME-GVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVANSLINMYGKSG 276

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A  +F+ MP +D  S+N L+T +   GL + A+  F E    GF+P   TF A L 
Sbjct: 277 NLEAAEEIFESMPSRDISSWNVLLTVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQ 336

Query: 183 A--GVGLADIAL 192
           A    GL D  +
Sbjct: 337 ACSHAGLLDTGV 348


>gi|326521542|dbj|BAK00347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 861

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/788 (32%), Positives = 414/788 (52%), Gaps = 52/788 (6%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-KNQFREAFKLFVDMRTDGG 68
           N ++ GY+++G L  A E+F+ M  R A S++ LI G+++  +    A  LF  MR   G
Sbjct: 76  NAVMCGYIRAGRLTDALEVFDRMTARDAASYSALISGHARLGSPVSAAEALFRSMRL-AG 134

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLA 127
             P   TF  LL+ C          QVHA   K  Y    L++ N+L+  Y K   L+ A
Sbjct: 135 LAPTKYTFVGLLTACIRRGNPRLGTQVHALAAKGRYIGGSLLVANALLGMYVKCGRLEDA 194

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
            R+F  M ++D  S+N +++G  + G  EEA +LF +M+        F+ +A L+A    
Sbjct: 195 LRMFHGMEERDVSSWNTVLSGLVELGRYEEAFELFGDMRTSDVAVDRFSLSALLAAATEG 254

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-------------------- 227
             +  G  VHA  +K+    ++ V NAL+  Y++H   VE                    
Sbjct: 255 FCLPHGAAVHALSLKSGLEVDLSVGNALIGFYAEHGDSVEDMVGVFQRMPVKDVISWTGL 314

Query: 228 ------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYK----------ESLKLFRE 265
                       A  +F  MPE + V+YN ++T +  N++            + L LFR+
Sbjct: 315 LNGYMEFGLVDNALGVFYRMPERNFVTYNAVLTGFCRNKESARVTFARKAGLQGLGLFRQ 374

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +     + S    + +L+  A   D +I  Q+HT  I     S   +  +L+DM  KCGR
Sbjct: 375 MLENGLEMSDVTVTGVLNACAIAADRKISEQVHTFVIKCGCGSSPWIDAALIDMCIKCGR 434

Query: 326 FEEAKEIFANLSHIST--VPWTAMISAYVQKGNLEEALNLFIEMCR-ANIS-ADQATFAS 381
             +A+ +F +  H  +  + W++++ +  + G  E+A + F++M R ++I   D+    +
Sbjct: 435 SGDARLLFEHWRHQESFHIAWSSLLLSSFRDGEYEKAFSTFLQMFRNSDIQFIDEFLLTN 494

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L     L  + LGKQ+H    +SG +     G+A++ MY K G L++A+  F+ MP R+
Sbjct: 495 VLGVCGALGFMELGKQMHLLAAKSGLLRACGVGNAIVSMYGKCGQLENAVTFFQRMPHRD 554

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS--HCGLIEEGLQY 499
           +VSWNALI+A   +        ++ +M +   +PDSV+ L ++SACS  +    +  ++ 
Sbjct: 555 LVSWNALITAHLLHRQGDEIWDTWSEMERLVIKPDSVTFLLIISACSCTNSDSADACMEL 614

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
           F+SM+ KY   P  EH+A++V++L R G FDEAE+ +A MPF+P  I+W S++ +C    
Sbjct: 615 FHSMSSKYNTEPAMEHFAAVVNVLGRWGHFDEAEQFIASMPFKPSAIVWRSLLETCSKQS 674

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           N+   ++A + L  +E  +D + YV  SN+Y+ + +W      +  MRE+G+ K+ A SW
Sbjct: 675 NMTLRRRAMNHLLALEP-QDPSTYVLASNLYSESAKWHCSENTRLEMREKGIHKIPARSW 733

Query: 620 VELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLK 679
               + +H F A D  HPQ+ +I   ++ L  E  K GY+PDT+  LHD +E  K   L 
Sbjct: 734 TFDDNAIHSFFARDRSHPQSKDIYAGLDVLTLECMKAGYEPDTTFVLHDVEEYQKRYFLM 793

Query: 680 YHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFK 739
           YHS +LA  + L+    G  I V+KN+R C DCH+ ++  S  TG+EI+VRDS+ FH F+
Sbjct: 794 YHSAKLAATYGLLMAGSGKIIRVVKNIRMCGDCHSFLEHASAATGKEISVRDSNGFHIFR 853

Query: 740 DGFCSCRD 747
            G CSCR+
Sbjct: 854 AGICSCRE 861



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 187 LADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           L + A  R  HA   K+      +  +ANA++  Y +   + +A ++F  M   D  SY+
Sbjct: 48  LPNAADPRAAHAVATKSGTAAQLDARLANAVMCGYIRAGRLTDALEVFDRMTARDAASYS 107

Query: 245 VMITCYA-WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            +I+ +A        +  LFR ++      +++ F  LL+    + + ++G Q+H     
Sbjct: 108 ALISGHARLGSPVSAAEALFRSMRLAGLAPTKYTFVGLLTACIRRGNPRLGTQVHALAAK 167

Query: 304 TTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
              I   + VAN+L+ MY KCGR E+A  +F  +       W  ++S  V+ G  EEA  
Sbjct: 168 GRYIGGSLLVANALLGMYVKCGRLEDALRMFHGMEERDVSSWNTVLSGLVELGRYEEAFE 227

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF +M  ++++ D+ + +++L A+ E   L  G  +H+  ++SG   ++  G+AL+  YA
Sbjct: 228 LFGDMRTSDVAVDRFSLSALLAAATEGFCLPHGAAVHALSLKSGLEVDLSVGNALIGFYA 287

Query: 423 KSG-SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           + G S++D +  F+ MP ++++SW  L++   + G     L  F  M +  +
Sbjct: 288 EHGDSVEDMVGVFQRMPVKDVISWTGLLNGYMEFGLVDNALGVFYRMPERNF 339



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 137/278 (49%), Gaps = 10/278 (3%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L ++ N  D +    + T++  T A  + ++AN+++  Y + GR  +A E+F  ++    
Sbjct: 45  LRLLPNAADPRAAHAVATKS-GTAAQLDARLANAVMCGYIRAGRLTDALEVFDRMTARDA 103

Query: 342 VPWTAMISAYVQKGN-LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
             ++A+IS + + G+ +  A  LF  M  A ++  + TF  +L A     +  LG Q+H+
Sbjct: 104 ASYSALISGHARLGSPVSAAEALFRSMRLAGLAPTKYTFVGLLTACIRRGNPRLGTQVHA 163

Query: 401 FVIRSGFM-SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
              +  ++  ++   +ALL MY K G L+DA++ F  M ER++ SWN ++S   + G  +
Sbjct: 164 LAAKGRYIGGSLLVANALLGMYVKCGRLEDALRMFHGMEERDVSSWNTVLSGLVELGRYE 223

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
              + F DM  S    D  SL ++L+A +    +  G    ++++ K  L        ++
Sbjct: 224 EAFELFGDMRTSDVAVDRFSLSALLAAATEGFCLPHGAA-VHALSLKSGLEVDLSVGNAL 282

Query: 520 VDILCRSGCFDEAEKLMA---QMPFEPDEIMWSSVINS 554
           +      G  D  E ++    +MP + D I W+ ++N 
Sbjct: 283 IGFYAEHG--DSVEDMVGVFQRMPVK-DVISWTGLLNG 317


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/561 (38%), Positives = 332/561 (59%), Gaps = 8/561 (1%)

Query: 194 RQVHAFVVKTNFVENV--FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +Q+HAF ++         F  + +  L S    +  A ++F ++   +  ++N MI  +A
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 252 WNEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +E    +++LF ++        D   FPF  L   VA  +D+ +G  IH+  +     S
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPF--LFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              V NSLV MY+  G    A ++F  +S+   V W ++I+ +   G   EAL L+ EM 
Sbjct: 170 LRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMG 229

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T  S+L A  EL +L+LG+++H ++++ G + N  + +ALLD+Y+K G+ +
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F EM ER++VSW +LI   A NG     LK F ++ + G +P  ++ + VL ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           HCG+++EG  YF  M ++Y + P+ EH+  MVD+LCR+G   +A   +  MP  P+ ++W
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C IH +LE  + A  ++ ++E+ R +  +V +SN+YA   +W  V  V+K M  
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQ-RHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +GV+K   YS VELK++V+ F   D  HPQ+ E    +  + Q +K EGY P T   L D
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +EE K  +L +H+E++AIAF L+NTP G+PI +MKNLR C DCH AIKLISK+  REI 
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD SRFHHFKDG CSC+D+W
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 187/378 (49%), Gaps = 14/378 (3%)

Query: 1   MPNQNTVSTNMLISGYVK-SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           +P QN      LI   V  S  ++ A ++FN +      +W  +I G+++      A +L
Sbjct: 63  VPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVEL 122

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M       PD  TF  L    ++    +    +H+ +++ G++S+  + NSLV  Y 
Sbjct: 123 FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            +  L  A +VF+ M  +D V++N++I GFA  G+  EA+ L+ EM   G +P  FT  +
Sbjct: 183 VLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVS 242

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            LSA V L  +ALG +VH ++VK   V+N   +NALLDLYSK     +A+K+F EM E  
Sbjct: 243 LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERS 302

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----R 295
            VS+  +I   A N    E+LKLF EL+      S+  F  +L   ++   L  G    R
Sbjct: 303 VVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFR 362

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           ++  +  +   +  ++    +VD+  + G+  +A +   N+    + V W  ++ A    
Sbjct: 363 RMKEEYGI---LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419

Query: 355 GNLEEALNLFIEMCRANI 372
           G+LE       E+ RA I
Sbjct: 420 GHLELG-----EVARAEI 432



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 15/379 (3%)

Query: 88  TANELIQVHADIIKFG-------YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
           + ++L Q+HA  I+ G       +N  LI   +LV        +  A ++F ++   +  
Sbjct: 47  SQSKLKQIHAFSIRHGVPPQNPDFNKHLIF--ALVSLSAP---MSFAAQIFNQIQAPNIF 101

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           ++N +I GFA+      A++LF +M       P   TF     A   L D++LG  +H+ 
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           VV+  F    FV N+L+ +YS    +  A ++F  M   D V++N +I  +A N    E+
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEA 221

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L L+RE+     +   F   +LLS       L +G ++H   +    +     +N+L+D+
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KCG F +A+++F  +   S V WT++I      G   EAL LF E+ R  +   + TF
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341

Query: 380 ASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             +L A +    L  G           G +  +     ++D+  ++G + DA    + MP
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMP 401

Query: 439 -ERNIVSWNALISACAQNG 456
              N V W  L+ AC  +G
Sbjct: 402 VPPNAVIWRTLLGACTIHG 420


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 371/655 (56%), Gaps = 4/655 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREA--FKLFVDMRTDG 67
           N L++ Y K   L  A+ +F  + ++  VSW  +I GYSQ      +   +LF  MR + 
Sbjct: 44  NSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAEN 103

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            + P+  TFA + +  S    A      HA  IK      + + +SL++ YCK      A
Sbjct: 104 -TAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEA 162

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+VF  MP+++SVS+  +I+G+A + L  EA+ LF  M+      ++F F + LSA    
Sbjct: 163 RKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLP 222

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+Q+H   VK   +  V V NAL+ +Y+K   + +A + F    + + ++++ MI
Sbjct: 223 ELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMI 282

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T YA +    ++LKLF  +  +    S+F F  +++  ++      G+Q+H   +     
Sbjct: 283 TGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFE 342

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++ V  +LVDMYAKC    +A++ F  L     V WT+MI  YVQ G  E+AL+L+  M
Sbjct: 343 SQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRM 402

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  ++ T AS+L+A + LA+L  GKQ+H+  ++ GF   V  GSAL  MYAK G L
Sbjct: 403 EMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCL 462

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           KD    F+ MP R+++SWNA+IS  +QNG  +  L+ FE+M   G +PD V+ +++LSAC
Sbjct: 463 KDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+E G  YF  M  ++ + P+ EHYA MVDIL R+G   EA +       +    +
Sbjct: 523 SHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCL 582

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W  ++ +CR ++N E    A ++L ++   ++++ YV +S+IY+  G+WE V +V++ M+
Sbjct: 583 WRIILGACRNYRNYELGAYAGEKLMELGS-QESSAYVLLSSIYSALGRWEDVERVRRMMK 641

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
            RGV K    SW+ELKS VHVF   D++HPQ  +I  ++  L ++MK EGY+P T
Sbjct: 642 LRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPAT 696



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/498 (33%), Positives = 275/498 (55%), Gaps = 10/498 (2%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA IIK   +S + I NSLV+ Y K + L  A+ VF+ +  KD VS+N +I G+++ G 
Sbjct: 28  LHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGP 86

Query: 155 --NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
             +   ++LF  M+     P+  TFA   +A   L D A GR  HA  +K +   +VFV 
Sbjct: 87  SGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVG 146

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           ++L+++Y K     EARK+F  MPE + VS+  MI+ YA  +   E+L LFR ++     
Sbjct: 147 SSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEG 206

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            ++F F+++LS +     +  G+QIH   +    +S V V N+LV MYAKCG  ++A + 
Sbjct: 207 ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQT 266

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F   S  +++ W+AMI+ Y Q G+ ++AL LF  M  + I   + TF  ++ A ++L + 
Sbjct: 267 FETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAA 326

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             GKQ+H ++++ GF S ++  +AL+DMYAK  S+ DA + F  + E +IV W ++I   
Sbjct: 327 WEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGY 386

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            QNG+ +  L  +  M   G  P+ +++ SVL ACS    +E+G Q  ++ T KY    +
Sbjct: 387 VQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQ-IHARTVKYGFGLE 445

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
               +++  +  + GC  +   +  +MP   D I W+++I+   + +N     K A +LF
Sbjct: 446 VPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMISG--LSQN--GCGKEALELF 500

Query: 573 KMEKLRDAAP-YVAMSNI 589
           +  +L    P YV   NI
Sbjct: 501 EEMQLEGTKPDYVTFVNI 518



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 164/354 (46%), Gaps = 47/354 (13%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           F+ LL    N+  LQ G+ +H Q I+ ++ S V +ANSLV++YAKC R  EAK +F  + 
Sbjct: 10  FTALLQYTHNR-SLQKGKALHAQ-IIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQ 67

Query: 338 HISTVPWTAMISAYVQKG--NLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   V W  +I+ Y Q G       + LF  M   N + +  TFA +  A++ L   + G
Sbjct: 68  NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           +  H+  I+     +VF GS+L++MY K+G   +A + F  MPERN VSW  +IS  A  
Sbjct: 128 RLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187

Query: 456 GDAQATLKSFE------------------------DMVQSGYQPDSVS----LLSVLSAC 487
             A   L  F                         ++V +G Q   ++    LLS++S  
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247

Query: 488 -------SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM- 539
                  + CG +++ LQ F + + K  +      +++M+    +SG  D+A KL + M 
Sbjct: 248 NALVTMYAKCGSLDDALQTFETSSDKNSIT-----WSAMITGYAQSGDSDKALKLFSSMH 302

Query: 540 --PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
                P E  +  VIN+C         K+  D L K+          A+ ++YA
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYA 356


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/690 (33%), Positives = 368/690 (53%), Gaps = 47/690 (6%)

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R  G S      F  L+      +T  +L Q+HA I      S   +   L+ S C ++ 
Sbjct: 31  RAHGPSRSPETHFIPLIHAS---NTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKS 87

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           LD A  +F+     +   FNALI G A+    E ++  FV M  L  +P   T    L +
Sbjct: 88  LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKS 147

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS- 242
              L D+ LGR +H  V+K     + FV  +L+D+Y K   +    +LF E P+ +    
Sbjct: 148 VAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAES 207

Query: 243 ---YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
              +NV+I          ++  LF  +     +R+   +                     
Sbjct: 208 ILLWNVLINGCCKVGDLSKAASLFEAMP----ERNAGSW--------------------- 242

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                         NSL++ + + G  + A+E+F  +   + V WT MI+ + Q G+ E+
Sbjct: 243 --------------NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEK 288

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL++F  M    +  +  T  S L A  ++ +L +G+++H+++  +GF  N   G+AL+D
Sbjct: 289 ALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVD 348

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK G++K A + F E   +++++W+ +I   A +G     L+ F  M  +G  PD V 
Sbjct: 349 MYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVI 408

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            L++L+ACSH G +++GL +F SM   Y + P  +HY  +VD+L R+G  DEA   +  M
Sbjct: 409 FLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSM 468

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P  PD ++W ++  +CR HKN+E A+  A++L ++E  +    YV +SN+YA  G+WE V
Sbjct: 469 PINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEP-KHPGSYVFLSNVYAAVGRWEDV 527

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            +V+  M+ RGV K   +S++E++ +VH F A D  H +  EI  K+E +    K+EGY 
Sbjct: 528 ERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYM 587

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           P+T+  LH+ +EE K ++L  HSE+LA+AF LI+T  GS I ++KNLR C DCH+ +K  
Sbjct: 588 PETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYA 647

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SK++ REI +RD  RFHHFKDG CSC D+W
Sbjct: 648 SKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 1/183 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  S N LI+G+V++G+L  ARELF  M ++  VSWT +I G+SQ     +A  +F
Sbjct: 234 MPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMF 293

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G  P+ +T  + L  C++        ++H  +   G+     I  +LVD Y K
Sbjct: 294 WRMLEE-GVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAK 352

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A RVF E   KD ++++ +I G+A  G  ++A++ FV+M+  G  P +  F A 
Sbjct: 353 CGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAI 412

Query: 181 LSA 183
           L+A
Sbjct: 413 LTA 415



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K GN+ +A  +F     +  ++W+++I G++    F +A + FV M++  G +P
Sbjct: 346 LVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS-AGINP 404

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           D V F  +L+ CS     ++ +     + + +     +     +VD   +   LD A   
Sbjct: 405 DEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSF 464

Query: 131 FKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVE--MQHLGFKPSDFTFAAALSAGVG 186
            + MP   D V + AL     +   N E  +L  E  +Q     P  + F + + A VG
Sbjct: 465 IQSMPINPDFVIWGALFCA-CRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVG 522


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/669 (33%), Positives = 379/669 (56%), Gaps = 2/669 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ V+ + L+  Y K   L  + ++F+ +  +  V W+ +I G  Q ++     +LF +M
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G      + +A++   C+         Q+HA  +K  + S + +  + +D Y K   
Sbjct: 269 QKVGIGVSQSI-YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGS 327

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A+R+F  +P+     +NA+I G  +     EA++ F  +   G   ++ + + A SA
Sbjct: 328 LADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSA 387

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              +     GRQ+H+  VK+    N+ VAN++LD+Y K + + EA  +F EM   D VS+
Sbjct: 388 CASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSW 447

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  +  N   +E+L LF  +   R +  QF + ++L   +++  L  G +IH + I 
Sbjct: 448 NAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +    +  V  +L+DMY KCG  EEAK+I   +   + V W A+I+ +    + E+A + 
Sbjct: 508 SGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSF 567

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM + ++  D  T+A +L A A LAS+ LGKQ+H  +I+    S+V+  S L+DMY+K
Sbjct: 568 FYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSK 627

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G+++D+   F++ P ++ V+WNA+I   AQ+G  +  L  FE M     +P+  + +S+
Sbjct: 628 CGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSI 687

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           L AC+H G I++GL YFN+M  +Y L P+ EHY+ M+DI+ RSG   EA KL+ +MPFE 
Sbjct: 688 LRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEA 747

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           D ++W ++++ C+IH N+E A+KA + + ++E   D++  + +SNIYA AG W  VS+++
Sbjct: 748 DAVIWRTLLSICKIHGNIEIAEKATNAILQLEP-EDSSACILLSNIYADAGMWGKVSEMR 806

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           K MR   ++K    SW+E+K +VH F   ++ HP+  EI + +  L+ EMK  GY PD  
Sbjct: 807 KMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDID 866

Query: 664 CALHDEDEE 672
             + +E EE
Sbjct: 867 FLIDEESEE 875



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 169/553 (30%), Positives = 299/553 (54%), Gaps = 4/553 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ +S N +ISGY  +G +  A E F     R  VSW  ++ G+ Q  + R++  +F
Sbjct: 104 MSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVF 163

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           +DM        D  TFA +L  CS  +     IQVH  I++ G+   ++  ++L+D Y K
Sbjct: 164 LDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAK 223

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD + ++F E+P K+ V ++A+I G  +   +   ++LF EMQ +G   S   +A+ 
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +  GL+ + +G Q+HA  +K +F  ++ V  A LD+Y+K   + +A+++F  +P+   
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHT 299
             YN +I     NE+  E+L+ F+ L  +    ++   S   S  A+ K DL  GRQ+H+
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHS 402

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            ++ +T  S + VANS++DMY KC    EA  +F  +     V W A+I+A+ Q GN EE
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            LNLF  M R  +  DQ T+ S+L+A +   +L+ G ++H+ +I+SG   + F G AL+D
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALID 522

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY K G +++A +    + ++ +VSWNA+I+       ++     F +M++   +PD+ +
Sbjct: 523 MYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFT 582

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
              VL AC++   +  G Q    +  K +L       +++VD+  + G   ++  +  + 
Sbjct: 583 YAIVLDACANLASVGLGKQIHGQII-KLELHSDVYITSTLVDMYSKCGNMQDSALVFEKA 641

Query: 540 PFEPDEIMWSSVI 552
           P   D + W+++I
Sbjct: 642 P-NKDFVTWNAMI 653



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 287/596 (48%), Gaps = 71/596 (11%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ ++  CS+ ++     Q HA +I  G+   + I N L+  Y +   L+ A +VF++M
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 135 PQKDSVSFNALITGFAKEG----LNE---------------------------EAIKLFV 163
            Q+D +S+N +I+G+A  G     NE                           ++I +F+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 164 EM---QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
           +M   + +GF  +  TFA  L A   L D  LG QVH  +V+  F ++V   +ALLD+Y+
Sbjct: 165 DMGRSEEVGFDQT--TFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA 222

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           K   + ++ K+F E+P  + V ++ +I     N+++   L+LF+E+Q      SQ  +++
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +    A    L++G Q+H   +     S++ V  + +DMYAKCG   +A+ IF +L   S
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
              + A+I   V+     EAL  F  + ++ +  ++ + +    A A +     G+QLHS
Sbjct: 343 LQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             ++S   SN+   +++LDMY K  +L +A   F EM  R+ VSWNA+I+A  QNG+ + 
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
           TL  F  M++   +PD  +  SVL ACS    +  G++  N +  K  L        +++
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRII-KSGLGLDSFVGGALI 521

Query: 521 DILCRSGCFDEAEKL----------------------------------MAQMPFEPDEI 546
           D+ C+ G  +EA+K+                                  M +M  +PD  
Sbjct: 522 DMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNF 581

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            ++ V+++C    ++   K+   Q+ K+E   D      + ++Y+  G  +  + V
Sbjct: 582 TYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALV 637



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 249/538 (46%), Gaps = 87/538 (16%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA- 251
           G+Q HA ++ + F+ +V+++N L+ +Y +   +  A K+F +M + D +SYN MI+ YA 
Sbjct: 62  GKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYAD 121

Query: 252 ---------------------WNE---------QYKESLKLFRELQFTR---FDRSQFPF 278
                                WN          + ++S+ +F ++  +    FD  Q  F
Sbjct: 122 AGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFD--QTTF 179

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           + +L   +   D  +G Q+H   +      +V   ++L+DMYAKC R +++ +IF+ +  
Sbjct: 180 AVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPV 239

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + V W+A+I+  VQ       L LF EM +  I   Q+ +AS+ R+ A L++L +G QL
Sbjct: 240 KNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQL 299

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H+  ++  F S++  G+A LDMYAK GSL DA + F  +P+ ++  +NA+I  C +N   
Sbjct: 300 HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKG 359

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
              L+ F+ +++SG   + +SL    SAC+      +G Q  +S++ K  LR       S
Sbjct: 360 FEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ-LHSLSVKSTLRSNICVANS 418

Query: 519 MVDI------LCRSGC-FDEAEKL---------------------------MAQMPFEPD 544
           ++D+      L  + C FDE E+                            M ++  EPD
Sbjct: 419 ILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPD 478

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           +  + SV+ +C   + L    +  +++ K     D+    A+ ++Y   G  E   ++  
Sbjct: 479 QFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHD 538

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
            + ++     T  SW  + +   +   +++ H           +   EM K   KPD 
Sbjct: 539 RIEQQ-----TMVSWNAIIAGFTLLKHSEDAH-----------SFFYEMLKMSVKPDN 580



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 166/346 (47%), Gaps = 40/346 (11%)

Query: 256 YKESLKLFRELQFTRFDRSQ--FP-----FSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
           Y ++L++F     +   ++Q   P     FS ++   ++   L+ G+Q H + IV+  I 
Sbjct: 17  YNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIP 76

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSH---IS------------------------- 340
           +V ++N L+ MY +C     A ++F  +S    IS                         
Sbjct: 77  DVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP 136

Query: 341 ---TVPWTAMISAYVQKGNLEEALNLFIEMCRA-NISADQATFASILRASAELASLSLGK 396
               V W +M+S ++Q G   +++++F++M R+  +  DQ TFA +L+A + L    LG 
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI 196

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+H  ++R GF  +V +GSALLDMYAK   L D+++ F E+P +N V W+A+I+ C QN 
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
           +    L+ F++M + G         SV  +C+    ++ G Q  ++   K          
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQ-LHAHALKCDFGSDITVG 315

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
            + +D+  + G   +A+++   +P    +   + ++   R  K  E
Sbjct: 316 TATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFE 361


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/628 (37%), Positives = 360/628 (57%), Gaps = 6/628 (0%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + L  R F   P    +     I+     G  +EA+   +EM  LG +     + A L+A
Sbjct: 5   MRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNA 61

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            +    +  G++VHA ++KT ++   ++   LL  Y K DC+ +ARK+  EMPE + VS+
Sbjct: 62  CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             MI+ Y+      E+L +F E+  +    ++F F+T+L+       L +G+QIH   + 
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S + V +SL+DMYAK G+ +EA+EIF  L     V  TA+I+ Y Q G  EEAL +
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  +    +S +  T+AS+L A + LA L  GKQ H  V+R          ++L+DMY+K
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLS 482
            G+L  A + F  MPER  +SWNA++   +++G  +  L+ F  M  +   +PD+V+LL+
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361

Query: 483 VLSACSHCGLIEEGLQYFNSMTQ-KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           VLS CSH  + + GL  F+ M   +Y  +P  EHY  +VD+L R+G  DEA + + +MP 
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
           +P   +  S++ +CR+H +++  +    +L ++E   +A  YV +SN+YA AG+W  V+ 
Sbjct: 422 KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP-ENAGNYVILSNLYASAGRWADVNN 480

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+  M ++ V K    SW++ +  +H F AND  HP+  E+  K++ +  +MK+ GY PD
Sbjct: 481 VRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPD 540

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
            SC L+D DEE K + L  HSE+LA+ F LI T EG PI V KNLR C DCH   K+ SK
Sbjct: 541 LSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSK 600

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +  RE+++RD +RFH   DG CSC D+W
Sbjct: 601 VFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 4/389 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G +  +  +  LL+ C +     +  +VHA +IK  Y     +   L+  Y K  CL+ A
Sbjct: 47  GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R+V  EMP+K+ VS+ A+I+ +++ G + EA+ +F EM     KP++FTFA  L++ +  
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           + + LG+Q+H  +VK N+  ++FV ++LLD+Y+K   + EAR++F  +PE D VS   +I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA     +E+L++F  L       +   +++LL+ ++    L  G+Q H   +     
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
               + NSL+DMY+KCG    A+ +F N+   + + W AM+  Y + G   E L LF  M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346

Query: 368 C-RANISADQATFASILRASAELASLSLGKQLHSFVIRS--GFMSNVFSGSALLDMYAKS 424
                +  D  T  ++L   +       G  +   ++    G          ++DM  ++
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRA 406

Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISAC 452
           G + +A +  K MP +       +L+ AC
Sbjct: 407 GRIDEAFEFIKRMPSKPTAGVLGSLLGAC 435



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 194/378 (51%), Gaps = 33/378 (8%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRT 65
           + T +LI  Y K   L  AR++ + M ++  VSWT +I  YSQ     EA  +F + MR+
Sbjct: 89  LRTRLLIF-YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           DG   P+  TFAT+L+ C          Q+H  I+K+ Y+S + + +SL+D Y K   + 
Sbjct: 148 DG--KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F+ +P++D VS  A+I G+A+ GL+EEA+++F  +   G  P+  T+A+ L+A  
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
           GLA +  G+Q H  V++        + N+L+D+YSK   +  AR+LF  MPE   +S+N 
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  Y+ +   +E L+LFR ++  +  R +    TLL+V++       GR   T   +  
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEK--RVKPDAVTLLAVLSG---CSHGRMEDTGLNIFD 380

Query: 306 AISEVKVANS--------LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
            +   +            +VDM  + GR +EA   F  +  + + P   ++ +       
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA---FEFIKRMPSKPTAGVLGS------- 430

Query: 358 EEALNLFIEMCRANISAD 375
                  +  CR ++S D
Sbjct: 431 ------LLGACRVHLSVD 442


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/713 (35%), Positives = 404/713 (56%), Gaps = 24/713 (3%)

Query: 50  KNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI-- 107
           +   +EA KLF  +         + T+A L   C+   +  E   +H  +     NS   
Sbjct: 40  RGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFN 99

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L + N +V+ Y K   LD A ++F EMP+K+ VS+ AL++G+A+ G + E  ++F  M  
Sbjct: 100 LFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGML- 158

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC--V 225
           +  +P++F FA+ +SA  G  D   GRQVHA  +KT+F   V+V NAL+ +Y K  C   
Sbjct: 159 IWHQPTEFAFASVISACGG--DDNCGRQVHALALKTSFDSCVYVGNALIMMYCK-SCGGA 215

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF--TRFDRSQFPFSTLLS 283
            EA  ++  M   + VS+N MI  +        +L+LF ++     RFDR+     ++ S
Sbjct: 216 DEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATL--VSIFS 273

Query: 284 VVANKLD-LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG-RFEEAKEIFANL-SHIS 340
            +    D L+   Q+   TI T  I +++VA +LV  Y+  G    +   IF  L     
Sbjct: 274 CLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQD 333

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WT +I+A+ ++ + ++AL +F +  R  ++ D+  F+ +L+A A LA+      + S
Sbjct: 334 VVSWTGIIAAFAER-DPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQS 392

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            V++ GF  ++   +AL+   A+ GS+  + Q F +M  R+ VSWN+++ A A +G  + 
Sbjct: 393 HVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKE 452

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F  M     QPD  + +++LSACSH G+ EEG + F +M+  + + P+ +HYA MV
Sbjct: 453 ALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMV 509

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           DIL R+G   EA++L+ +MP EPD ++WS+++ SCR H   + AK AA +L +++   ++
Sbjct: 510 DILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDP-NNS 568

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV MSNI+   G++     +++ M  + VRK    SW+E+ ++VH F +  + HP+  
Sbjct: 569 LGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKE 628

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP----E 696
            I  ++E L++ +K  GY P  S ALHD ++E K E L YHSE+LA+AFAL+N       
Sbjct: 629 AICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCS 688

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G+ I +MKN+R C DCH  +KL S++   EI VRDS+RFHHFK   CSC D+W
Sbjct: 689 GNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 230/467 (49%), Gaps = 18/467 (3%)

Query: 2   PNQ--NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           PN   N   TN +++ Y K G+L  A ++F+ M ++  VSWT L+ GY+Q  +  E F++
Sbjct: 94  PNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRV 153

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M       P    FA+++S C   D      QVHA  +K  ++S + + N+L+  YC
Sbjct: 154 FRGMLI--WHQPTEFAFASVISACGGDDNCGR--QVHALALKTSFDSCVYVGNALIMMYC 209

Query: 120 KIRC--LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           K  C   D A  V++ M  ++ VS+N++I GF   G    A++LF +M   G +    T 
Sbjct: 210 K-SCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATL 268

Query: 178 AAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC-VVEARKLFGEM 235
            +  S   G+ D +    Q+    +KT F+  + VA AL+  YS     V +  ++F E+
Sbjct: 269 VSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLEL 328

Query: 236 -PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
               D VS+  +I  +A  +  K++L +FR+         +  FS +L   A     +  
Sbjct: 329 DGRQDVVSWTGIIAAFAERDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHA 387

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
             + +  +      ++ +AN+L+   A+CG    +K++F  +    TV W +M+ AY   
Sbjct: 388 LTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMH 447

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFS 413
           G  +EAL LF +M   +   D ATF ++L A +       G K   +     G +  +  
Sbjct: 448 GQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDH 504

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            + ++D+  ++G + +A +   +MP E + V W+AL+ +C ++G+ +
Sbjct: 505 YACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETK 551


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/561 (38%), Positives = 333/561 (59%), Gaps = 8/561 (1%)

Query: 194 RQVHAFVVKTNFVENV--FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +Q+HAF ++         F  + +  L S    +  A ++F ++   +  ++N MI  +A
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111

Query: 252 WNEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +E    +++LF ++        D   FPF  L   VA  +D+ +G  IH+  +     S
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPF--LFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              V NSLV MY+  G  E A ++F  +S+   V W ++I+ +   G   EAL L+ EM 
Sbjct: 170 LRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMG 229

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
              +  D  T  S+L A  EL +L+LG+++H ++++ G + N  + +ALLD+Y+K G+ +
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F EM ER++VSW +LI   A NG     LK F ++ + G +P  ++ + VL ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           HCG+++EG  YF  M ++Y + P+ EH+  MVD+LCR+G   +A   +  MP  P+ ++W
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C IH +LE  + A  ++ ++E+ R +  +V +SN+YA   +W  V  V+K M  
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQ-RHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +GV+K   YS VELK++V+ F   D  HPQ+ E    +  + Q +K EGY P T   L D
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +EE K  +L +H+E++AIAF L+NTP G+PI +MKNLR C DCH AIKLISK+  REI 
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRD SRFHHFKDG CSC+D+W
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 186/378 (49%), Gaps = 14/378 (3%)

Query: 1   MPNQNTVSTNMLISGYVK-SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           +P QN      LI   V  S  ++ A ++FN +      +W  +I G+++      A +L
Sbjct: 63  VPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVEL 122

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M       PD  TF  L    ++    +    +H+ +++ G++S+  + NSLV  Y 
Sbjct: 123 FSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYS 182

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
                + A +VF+ M  +D V++N++I GFA  G+  EA+ L+ EM   G +P  FT  +
Sbjct: 183 VFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVS 242

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            LSA V L  +ALG +VH ++VK   V+N   +NALLDLYSK     +A+K+F EM E  
Sbjct: 243 LLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERS 302

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----R 295
            VS+  +I   A N    E+LKLF EL+      S+  F  +L   ++   L  G    R
Sbjct: 303 VVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFR 362

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
           ++  +  +   +  ++    +VD+  + G+  +A +   N+    + V W  ++ A    
Sbjct: 363 RMKEEYGI---LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIH 419

Query: 355 GNLEEALNLFIEMCRANI 372
           G+LE       E+ RA I
Sbjct: 420 GHLELG-----EVARAEI 432



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 88  TANELIQVHADIIKFG-------YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
           + ++L Q+HA  I+ G       +N  LI   +LV        +  A ++F ++   +  
Sbjct: 47  SQSKLKQIHAFSIRHGVPPQNPDFNKHLIF--ALVSLSAP---MSFAAQIFNQIQAPNIF 101

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           ++N +I GFA+      A++LF +M       P   TF     A   L D++LG  +H+ 
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           VV+  F    FV N+L+ +YS       A ++F  M   D V++N +I  +A N    E+
Sbjct: 162 VVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEA 221

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           L L+RE+     +   F   +LLS       L +G ++H   +    +     +N+L+D+
Sbjct: 222 LTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDL 281

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y+KCG F +A+++F  +   S V WT++I      G   EAL LF E+ R  +   + TF
Sbjct: 282 YSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITF 341

Query: 380 ASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             +L A +    L  G           G +  +     ++D+  ++G + DA    + MP
Sbjct: 342 VGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMP 401

Query: 439 -ERNIVSWNALISACAQNG 456
              N V W  L+ AC  +G
Sbjct: 402 VPPNAVIWRTLLGACTIHG 420


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/708 (32%), Positives = 382/708 (53%), Gaps = 60/708 (8%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYC-----------KIRCLDLARRVFKEMPQKDS 139
           +L Q+HA +++          N L D Y                LD AR+VF ++PQ + 
Sbjct: 154 QLKQIHAQMLR---------TNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHA 198
            S+N LI   A      +++ +F+ M H   F P+ FTF   + A        +G+ VH 
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE---VDGVSYNVMITCYAWNEQ 255
             +KT+F ++VFV N+L+  Y+    +  A  +F EM E    D VS+N M+T +     
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-EMIEGNNKDIVSWNSMVTGFVQGGY 323

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             ++L LF  ++      +     +++S  A  ++L +GR++         +  + V N+
Sbjct: 324 PDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNA 383

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTA----------------------------- 346
            +DM+ KCG  E A+ +F N+     V WT                              
Sbjct: 384 TIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAW 443

Query: 347 --MISAYVQKGNLEEALNLF--IEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
             +IS Y Q G  +EAL +F  +++ ++    DQ T  S L A A+L ++ +G+ +H ++
Sbjct: 444 NVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYI 503

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            +     N    ++L+DMY+KSG ++ AI+ F  +  +++  W+A+I+  A +G  +A +
Sbjct: 504 KKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAI 563

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           + F DM ++  +P+SV+  ++L ACSH GL++EG + F+ M + Y + PK +HY+ MVD+
Sbjct: 564 ELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDV 623

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R+G  +EA K +  MP  P   +W +++ +C IH NLE A+KA  +L ++E     A 
Sbjct: 624 LGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGA- 682

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           YV +SN+YA  G WE VS++++ MR+ G++K T  S +E+   VH F   D  HP + +I
Sbjct: 683 YVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDI 742

Query: 643 RRKIENLMQEMKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
             K++ +M  ++  GY  +T C L   E+EE+K ++LK HSE++AIAF LI       I 
Sbjct: 743 YAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIR 802

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           ++KNLR C DCH   K++SK+ GR+I +RD  RFHHF  G CSC+D+W
Sbjct: 803 IVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 229/486 (47%), Gaps = 37/486 (7%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L  AR++F+ +      SW ILI   +  +   ++  +F+ M  D    P+  TF  L+ 
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK--EMPQKDS 139
             +E         VH   IK  +   + + NSL+  Y     LDLA  VF+  E   KD 
Sbjct: 249 AVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDI 308

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+N+++TGF + G  ++A+ LF  M++ G  P+  T  + +SA     ++ LGR+V  +
Sbjct: 309 VSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDY 368

Query: 200 VVKTNFVENVFVANALLDLY----------------SKHDCVVE---------------A 228
           + +   + N+ V NA +D++                 K D V                 A
Sbjct: 369 IDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIA 428

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVVA 286
           R +F  MP  D  ++NV+I+ Y  + + KE+L +FRELQ T+      Q    + LS  A
Sbjct: 429 RDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACA 488

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               + IG  IH             +A SL+DMY+K G  E+A E+F ++ +     W+A
Sbjct: 489 QLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSA 548

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS- 405
           MI+     G  E A+ LF++M    +  +  TF ++L A +    +  GK+L   + R  
Sbjct: 549 MIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVY 608

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKS 464
           G +      S ++D+  ++G L++A++  + MP     S W AL+ AC  +G+ +   K+
Sbjct: 609 GVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKA 668

Query: 465 FEDMVQ 470
              +++
Sbjct: 669 CSRLLE 674



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 143/343 (41%), Gaps = 55/343 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   +I GY K      AR++F+SM  +   +W +LI GY Q  + +EA  +F
Sbjct: 404 MEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIF 463

Query: 61  VDMR-TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
            +++ T  G+ PD VT  + LS C++    +    +H  I K        +  SL+D Y 
Sbjct: 464 RELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYS 523

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   ++ A  VF  +  KD   ++A+I G A  G  E AI+LF++MQ    KP+  TF  
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A                                    S    V E ++LF EM  V 
Sbjct: 584 LLCA-----------------------------------CSHSGLVDEGKRLFDEMERVY 608

Query: 240 GV-----SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           GV      Y+ M+         +E+LK    +       S   +  LL       +L++ 
Sbjct: 609 GVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLA---PSASVWGALLGACCIHGNLELA 665

Query: 295 RQIHTQTIVTTAISEVKVANS-----LVDMYAKCGRFEEAKEI 332
            +  ++ +      E++  N      L ++YAK G +E   E+
Sbjct: 666 EKACSRLL------EIEPGNHGAYVLLSNLYAKTGDWEGVSEL 702


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 344/590 (58%), Gaps = 13/590 (2%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M   G  P+ FTF  A+ +   L+    G+Q+H  V KT  +   FV  +L+ +Y K   
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 225 VVEARKLFGEMPEVDG--VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
           +  ARKLF E P+     V YN +++ YA N + K+ + LF E++    + +      L+
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
                  +L +G  +H   +      +  V N L+ MY K G  +  +++F  +     +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            W AMI+ Y Q G     L L+ EM       D  T   +L + A L +LS+GK++   +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
              GF SN F  +AL++MYA+ G+LK A   F  MP +++VSW A+I     +G  +  +
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F++M++ G +PD  + +SVLSACSH GL  +GL YF  M +KY LRP  EHY+ MVD+
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           L R+G  +EA +L+  M    D  +W +++ +C+IH+N+E A+ A +Q+ ++E   +   
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEP-TNTGY 419

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           YV +SN+Y  AG  E + +V+  MR+R ++K    S+VE K +VH+F A D  HPQTNEI
Sbjct: 420 YVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEI 479

Query: 643 RRK---IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            +K   +ENL++++  +G K +     H+  EE  + S+  HSE+LA+AFAL+NT + + 
Sbjct: 480 YKKLNELENLVKDL--DGCKKND----HERREEY-LNSMGVHSEKLAVAFALLNTRKETE 532

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I+++KNLR C DCH  IKL+SKI  R+  VRD++RFHHFK+GFCSC+++W
Sbjct: 533 IIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 214/458 (46%), Gaps = 8/458 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+ P+  TF   +  C+         Q+H  + K G      +  SL+  Y K   +D A
Sbjct: 5   GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNA 64

Query: 128 RRVFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           R++F E PQ  K +V +N+L++G+A     ++ + LF EM+ LG + +  T    +    
Sbjct: 65  RKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCG 124

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
              ++ LG  VH F VK     +  V N LL +Y K   +   RKLF EMP    +++N 
Sbjct: 125 IPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNA 184

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI  YA N      L+L++E++   F         +LS  A+   L +G+++  +     
Sbjct: 185 MINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFG 244

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S   + N+LV+MYA+CG  ++A++IF  +   S V WTA+I  Y   G  E A+ LF 
Sbjct: 245 FSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFD 304

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKS 424
           EM R  I  D   F S+L A +     + G      + R  G        S ++D+  ++
Sbjct: 305 EMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRA 364

Query: 425 GSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
           G L +A +  + M  R +   W AL+ AC  + + +    +FE +++   +P +     +
Sbjct: 365 GRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIE--LEPTNTGYYVL 422

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           LS         EG+     + +K KL  KK+   S V+
Sbjct: 423 LSNVYTEAGNLEGILRVRMLMRKRKL--KKDPGCSYVE 458



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 173/360 (48%), Gaps = 19/360 (5%)

Query: 12  LISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           LIS Y K   +  AR+LF  N    +  V +  L+ GY+  ++ ++   LF +MR + G 
Sbjct: 51  LISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMR-ELGV 109

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           + + VT   L+  C  P      + VH   +KFG +    + N L+  Y K   +D  R+
Sbjct: 110 EINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRK 169

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F EMP+K  +++NA+I G+A+ GL    ++L+ EM+  GF P   T    LS+   L  
Sbjct: 170 LFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGA 229

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +++G++V   +    F  N F+ NAL+++Y++   + +AR +F  MP    VS+  +I  
Sbjct: 230 LSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGG 289

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y  + Q + ++ LF E+           F ++LS  ++         +  + +    + E
Sbjct: 290 YGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHA-------GLTNKGLDYFGVME 342

Query: 310 VKVA--------NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
            K          + +VD+  + GR  EA+E+  ++        W A++ A     N+E A
Sbjct: 343 RKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELA 402



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 1/174 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ YVKSG +   R+LF+ M  +  ++W  +I GY+Q        +L+ +M + G  
Sbjct: 152 NCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFC 211

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +T   +LS C+     +   +V   +  FG++S   + N+LV+ Y +   L  AR 
Sbjct: 212 -PDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARD 270

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +F  MP K  VS+ A+I G+   G  E A+ LF EM   G KP    F + LSA
Sbjct: 271 IFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSA 324



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L++ Y + GNL  AR++F+ M  ++ VSWT +IGGY    Q   A  LF +M 
Sbjct: 248 NPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEM- 306

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRC 123
             GG  PD   F ++LS CS     N+ +     +  K+G        + +VD   +   
Sbjct: 307 IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGR 366

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           L+ AR + + M  +   +    + G  K   N E  +L  E Q +  +P++  +   LS
Sbjct: 367 LNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFE-QVIELEPTNTGYYVLLS 424


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/659 (33%), Positives = 369/659 (55%), Gaps = 2/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L QV+  +I  G +    +    +++      ++ A + F+E+ + D + +NA+I G+ 
Sbjct: 2   HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 61

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           ++ + +  I+++++MQ     P+ FTF   L A  G +   +G+Q+H    K  F  NVF
Sbjct: 62  QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 121

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N+L+ +Y+K   +  AR +F ++ +   VS+  +I+ Y  N    E+L +F+E++   
Sbjct: 122 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 181

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                    ++++   N  DL  G+ IH          E  +  SL  MYAK G  E A+
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 241

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  +   + + W AMIS Y   G  EEA+ LF EM   NI  D  T  S + ASA++ 
Sbjct: 242 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL L + L  ++ +S +  + F  + L+DMYAK GS+  A   F  + ++++V W+ +I 
Sbjct: 302 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 361

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               +G  Q  +  + +M Q+G  P+  + + +L+AC + GL++EG + F+ M   + + 
Sbjct: 362 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIE 420

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P  +HY+ +VD+L R+G  ++A   +  MP +P   +W +++++C+IH+ +   + AA+Q
Sbjct: 421 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQ 480

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF ++   +   YV +SN+YA A  W  V+ V+  M ++G+ K   +S +E+   +  F 
Sbjct: 481 LFILDPY-NTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 539

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D  HP++ EI  +++ L + +K  GY P     LHD + E   E+L +HSERLA+A+ 
Sbjct: 540 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 599

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +I+T  G+ + + KNLRAC +CH+AIKLISK+  REI +RD+ RFHHFKDG CSC DFW
Sbjct: 600 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 206/436 (47%), Gaps = 6/436 (1%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G++  A + F  + +   + W  +I GY+QKN      ++++DM+      P+  TF  +
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ-VHPNCFTFLYV 91

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  C          Q+H    K+G+ S + + NSLV  Y K   +  AR VF ++  +  
Sbjct: 92  LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 151

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+ ++I+G+ + G   EA+ +F EM+    KP      + ++A   + D+  G+ +H  
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           V K        +  +L  +Y+K   V  AR  F  M + + + +N MI+ YA N   +E+
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271

Query: 260 LKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           +KLFRE+  +  R D      + L S     L+L   R +      +    +  V   L+
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLEL--ARWLDGYISKSEYRDDTFVNTGLI 329

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMYAKCG    A+ +F  ++    V W+ MI  Y   G+ +EA+ L+ EM +A +  +  
Sbjct: 330 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 389

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TF  +L A      +  G +L   +   G   +    S ++D+  ++G L  A      M
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449

Query: 438 PERNIVS-WNALISAC 452
           P +  VS W AL+SAC
Sbjct: 450 PIKPGVSVWGALLSAC 465



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 168/347 (48%), Gaps = 2/347 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+S Y K G ++ AR +F+ + DRT VSWT +I GY Q     EA  +F +MR
Sbjct: 119 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 178

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 PD++   ++++  +  +   +   +H  + K G      I  SL   Y K   +
Sbjct: 179 -QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV 237

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           ++AR  F  M + + + +NA+I+G+A  G  EEAIKLF EM     +    T  +A+ A 
Sbjct: 238 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 297

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  + L R +  ++ K+ + ++ FV   L+D+Y+K   +  AR +F  + + D V ++
Sbjct: 298 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 357

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VMI  Y  +   +E++ L+ E++      +   F  LL+   N   ++ G ++       
Sbjct: 358 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 417

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
                 +  + +VD+  + G   +A +   ++     V  W A++SA
Sbjct: 418 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/685 (33%), Positives = 385/685 (56%), Gaps = 13/685 (1%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
              ++L  C+    +++  QVH  ++K G    LI  N L+D YCK R   +A +VF  M
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P+++ VS++AL++G    G  + ++ LF EM   G  P++FTF+  L A   L  +  G 
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           Q+H F +K  F   V V N+L+D+YSK   + EA K+F  + +   +S+N MI  +    
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 255 QYKESLKLFRELQFTRFDR--SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT--AISEV 310
              ++L  F  +Q         +F  ++LL   ++   +  G+QIH   + +     S  
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            +  SLVD+Y KCG    A++ F  +   + + W+++I  Y Q+G   EA+ LF  +   
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLK 428
           N   D    +SI+   A+ A L  GKQ+ +  ++  SG  ++V +  +++DMY K G + 
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVD 365

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           +A + F EM  ++++SW  +I+   ++G  + +++ F +M++   +PD V  L+VLSACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H G+I+EG + F+ + + + ++P+ EHYA +VD+L R+G   EA+ L+  MP +P+  +W
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            ++++ CR+H ++E  K+    L +++  ++ A YV MSN+Y  AG W      ++    
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDA-KNPANYVMMSNLYGQAGYWNEQGNARELGNI 544

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALH 667
           +G++K    SWVE++ +VH F + ++ HP T  I+  ++   + +++E GY       LH
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604

Query: 668 DEDEEIKVESLKYHSERLAIAFALIN---TPEGSPILVMKNLRACTDCHAAIKLISKITG 724
           D D+E K E+L+ HSE+LAI  AL       +G  I V KNLR C DCH  IK +SKIT 
Sbjct: 605 DIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITK 664

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
               VRD+ RFH F+DG CSC D+W
Sbjct: 665 IAYVVRDAVRFHSFEDGCCSCGDYW 689



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 242/461 (52%), Gaps = 7/461 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +++N LI  Y K      A ++F+SM +R  VSW+ L+ G+      + +  LF +M 
Sbjct: 40  NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   P+  TF+T L  C   +   + +Q+H   +K G+  ++ + NSLVD Y K   +
Sbjct: 100 RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAAALS 182
           + A +VF+ +  +  +S+NA+I GF   G   +A+  F  MQ    K  P +FT  + L 
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218

Query: 183 AGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A      I  G+Q+H F+V++ F    +  +  +L+DLY K   +  ARK F ++ E   
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S++ +I  YA   ++ E++ LF+ LQ        F  S+++ V A+   L+ G+Q+   
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +   +  E  V NS+VDMY KCG  +EA++ FA +     + WT +I+ Y + G  +++
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
           + +F EM R NI  D+  + ++L A +    +  G++L S ++ + G    V   + ++D
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 458

Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQ 459
           +  ++G LK+A      MP + N+  W  L+S C  +GD +
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I   +    SILR          G Q+H ++++SG   N+ + + L+DMY K      A 
Sbjct: 2   IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F  MPERN+VSW+AL+S    NGD + +L  F +M + G  P+  +  + L AC    
Sbjct: 62  KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
            +E+GLQ  +    K       E   S+VD+  + G  +EAEK+  ++  +   I W+++
Sbjct: 122 ALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179

Query: 552 INSCRIHKNLEFAKKAADQLFKMEK 576
           I    +H    +  KA D    M++
Sbjct: 180 IAGF-VHAG--YGSKALDTFGMMQE 201


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/700 (33%), Positives = 394/700 (56%), Gaps = 79/700 (11%)

Query: 56  AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD-TANELIQVHADIIKFGYNSILIICNSL 114
           A K+F+ +  D  S      FA LL  C +   +A ++  VHA +IK G+++ + I N L
Sbjct: 2   ARKIFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRL 61

Query: 115 VDSYCKIRCLDLARRVFKEMPQK-------------------------------DSVSFN 143
           +D+Y K   L+  R++F +MPQ+                               D  ++N
Sbjct: 62  IDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           ++++GFA+    EEA+  F  M   GF  +++TFA+ LSA  GL D+  G Q+H+ + K+
Sbjct: 122 SMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKS 181

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             + +V++ +AL+D+YSK   V +A+++F EM + + VS+N +ITCY  N    E+LK+F
Sbjct: 182 PCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAK 322
           + +  +  +  +   ++++S  A+   +++G+++H + +    + +++ ++N+ VDMYAK
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAK 301

Query: 323 CGRFEEAKEIF---------ANLSHIS----------------------TVPWTAMISAY 351
           C R +EA+ IF         A  S +S                       V W A+I+ Y
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--- 408
            Q G  EEAL+LF  + R ++     TFA+IL+A A+LA L LG Q H  V++ GF    
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQS 421

Query: 409 ---SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
               ++F G++L+DMY K G +++    F++M ER+ VSWNA+I   AQNG     L+ F
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            +M+ SG +PD ++++ VLSAC H G +EEG  YF+SMT+ + + P ++HY  MVD+L R
Sbjct: 482 REMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  +EA+ ++ +MP +PD ++W S++ +C++H+N+   K  A++LF++E   ++ PYV 
Sbjct: 542 AGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVET-SNSGPYVL 600

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN+YA  G+W     V+K MR+ GV K    SW+++    HVF   D+ HP+  +I   
Sbjct: 601 LSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSL 660

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERL 685
           ++ L+ EM++   K D     H E   +  E + Y S  L
Sbjct: 661 LDILIAEMRQ---KQD-----HAETGSLSSEEMDYSSSLL 692



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 245/492 (49%), Gaps = 41/492 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  + N +++G  K G L  A  LF SM +R   +W  ++ G++Q ++  EA   F
Sbjct: 81  MPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  +G    +Y TFA+ LS CS  +  N  +Q+H+ I K    S + I ++LVD Y K
Sbjct: 141 AMMHKEGFVLNEY-TFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSK 199

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A++VF EM  ++ VS+N+LIT + + G   EA+K+F  M     +P + T A+ 
Sbjct: 200 CGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMP--- 236
           +SA   L+ I +G++VHA VVK + + N + ++NA +D+Y+K   + EAR +F  MP   
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319

Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                       E + VS+N +I  Y  N + +E+L LF  L+ 
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
                + + F+ +L   A+  DL +G Q H   +       +    ++ V NSL+DMY K
Sbjct: 380 ESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
           CG  EE   +F  +     V W AMI  + Q G   EAL LF EM  +    D  T   +
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGV 499

Query: 383 LRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
           L A      +  G+   S + R  G        + ++D+  ++G L++A    +EMP + 
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQP 559

Query: 441 NIVSWNALISAC 452
           + V W +L++AC
Sbjct: 560 DSVIWGSLLAAC 571


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 360/681 (52%), Gaps = 43/681 (6%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNS---LVDSYCKIRCLDLARRVFKE-- 133
           LL+ C  P     L   HA ++   + S     ++   L+ +Y     L LA  V +   
Sbjct: 18  LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSS 77

Query: 134 ---MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAAALSAGVGLA 188
                +  +V FN LI       L+ +A+ LF  M+  G    P  +T+  AL +     
Sbjct: 78  PDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASK 137

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+ LG Q+H+ V K     NV+VA++ + +YS+     +A ++F  MP  D VS+N MI 
Sbjct: 138 DLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIA 197

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A    +  ++++F+  QF     S     T+  ++                       
Sbjct: 198 GFARVGLFDRAIEVFK--QFVVLQGSMPDAGTMAGILP---------------------- 233

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              + N      AK       + +F N+     + W AM++ Y       +A+ LF+ M 
Sbjct: 234 --AMGN------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLME 285

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  +  D  T A++L    EL++ S+GK++H  + R     N+   +AL+DMYA  G LK
Sbjct: 286 KDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLK 345

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F  M  R+++SW ++ISA  ++G  +  +  FE M+  G +PDS++ ++VL+ACS
Sbjct: 346 DAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACS 405

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+ +G  YF+SMT +Y + PK EHY  MVD+L R+GC +EA   +  M  EP+E +W
Sbjct: 406 HAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVW 465

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CRIH N++    AAD LF +        YV +SN+YA AG+W  V+ V+  M  
Sbjct: 466 GALLQACRIHSNMDIGLVAADNLFSLVP-EQTGYYVLLSNMYARAGRWADVTSVRSVMVN 524

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           +G++K    S VEL  +VH F   D  HPQ+  I  K++ L+ +++  GY P+    LHD
Sbjct: 525 KGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHD 584

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +EE K + L  HSE+LAIAF L+NT  G+ I V  NLR C+DCH A KLIS IT REI 
Sbjct: 585 VEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIV 644

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           ++D++R HH   G CSC D+W
Sbjct: 645 LKDTNRIHHIVQGVCSCGDYW 665



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 212/476 (44%), Gaps = 47/476 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVD-----RTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           LI  Y     L  A  +  S         T V + +LI   +  +  R+A  LF  MR  
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 67  GGSD-PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           G +  PD+ T+   L  CS        +Q+H+ + K   +  + + +S +  Y +    +
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAG 184
            A RVF  MP +D VS+NA+I GFA+ GL + AI++F +   L G  P   T A  L A 
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA- 234

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                                     + NA      K D +   R++F  M   + +S+N
Sbjct: 235 --------------------------MGNA------KPDDIRFVRRVFDNMQFKELISWN 262

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            M+  YA NE + ++++LF  ++    +      +T+L          +G++IH      
Sbjct: 263 AMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRK 322

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                + + N+L+DMYA CG  ++A+EIF  +S    + WT++ISAY + G+  EA++LF
Sbjct: 323 NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLF 382

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
            +M    +  D   F ++L A +    L+ GK    S   R   +      + ++D+  +
Sbjct: 383 EKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGR 442

Query: 424 SGSLKDAIQTFKEM-PERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
           +G + +A      M  E N   W AL+ AC  + +    L + +++      Q+GY
Sbjct: 443 AGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGY 498



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 164/370 (44%), Gaps = 43/370 (11%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N    +  IS Y + G    A  +F+ M  R  VSW  +I G+++   F  A ++F  
Sbjct: 155 DRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQ 214

Query: 63  MRTDGGSDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                GS PD  T A +L   G ++PD            I+F                  
Sbjct: 215 FVVLQGSMPDAGTMAGILPAMGNAKPDD-----------IRF------------------ 245

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
                  RRVF  M  K+ +S+NA++  +A    + +A++LF+ M+    +P   T A  
Sbjct: 246 ------VRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATV 299

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L     L+  ++G+++H  + + N   N+ + NAL+D+Y+   C+ +AR++F  M   D 
Sbjct: 300 LPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDV 359

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHT 299
           +S+  +I+ Y  +   +E++ LF ++     +     F  +L+  ++   L  G+    +
Sbjct: 360 ISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDS 419

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKE-IFANLSHISTVPWTAMISAYVQKGNLE 358
            T     I + +    +VD+  + G   EA + I   L   +   W A++ A     N++
Sbjct: 420 MTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMD 479

Query: 359 EAL----NLF 364
             L    NLF
Sbjct: 480 IGLVAADNLF 489



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+  T++  +   G  K  ++   R +F++M  +  +SW  ++  Y+      +A +LF
Sbjct: 222 MPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELF 281

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M  D   +PD +T AT+L  C E    +   ++H  I +      L++ N+L+D Y  
Sbjct: 282 MLMEKD-EVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYAS 340

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL  AR +F  M  +D +S+ ++I+ + K G   EA+ LF +M   G +P    F A 
Sbjct: 341 CGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAV 400

Query: 181 LSAGVGLADIALGRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           L+A      +A G+    +   + + +        ++DL  +  C+ EA      M
Sbjct: 401 LAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTM 456


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/575 (38%), Positives = 335/575 (58%), Gaps = 5/575 (0%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           FT    L A   L D    R +   + K     NV   N L+  Y K+  +  ARKLF E
Sbjct: 78  FTANHLLLAYADLGDFPTARGLFERIPK----RNVMSWNILIGGYVKNGDLETARKLFDE 133

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           MP  +  ++N M+     +   +ESL  F  ++       ++   +L    A   D+  G
Sbjct: 134 MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSG 193

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           RQ+H   + +    ++ V +SL  MY +CG   + +     L  ++ V     IS   Q 
Sbjct: 194 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQN 253

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G+ E AL  F  M  A + A+  TF S + + ++LA+L+ G+Q+H+  I++G    V   
Sbjct: 254 GDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVM 313

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++L+ MY++ G L D+ +   E    ++V  +A+ISA   +G  Q  +  F+ M+ +G +
Sbjct: 314 TSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAE 373

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ V+ L++L ACSH GL +EG+  F  MT+ Y L+P  +HY  +VD+L RSGC +EAE 
Sbjct: 374 PNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAED 433

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           L+  MP +PD ++W +++++C+  K  + A++ A+++ +++   D+A YV +SNI A + 
Sbjct: 434 LILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDP-HDSASYVLLSNIRATSS 492

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +WE VS+V++ MRE+ VRK    SWVELK ++H F   DE H +  EI   +E +M  ++
Sbjct: 493 RWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIR 552

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + GY PD S   HD ++E K  SL +HSE+LAIAFA ++ PEG PI VMKNLR C DCH 
Sbjct: 553 QCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHV 612

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AIKL+SK+ GREI VRD SRFHHFKDG CSC D+W
Sbjct: 613 AIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 184/376 (48%), Gaps = 11/376 (2%)

Query: 88  TANELIQVHADIIKFGYNSIL---------IICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           TAN L+  +AD+  F     L         +  N L+  Y K   L+ AR++F EMP ++
Sbjct: 79  TANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARN 138

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
             ++NA++ G    GLNEE++  F  M+  G +P ++   +      GL D+  GRQVHA
Sbjct: 139 VATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHA 198

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           +VV++    ++ V ++L  +Y +   + +       +P ++ VS N  I+    N   + 
Sbjct: 199 YVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEG 258

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L+ F  ++    + +   F + ++  ++   L  G+QIH   I T     V V  SLV 
Sbjct: 259 ALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVH 318

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MY++CG   +++ +    S    V  +AMISAY   G+ ++A+ LF +M  A    ++ T
Sbjct: 319 MYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVT 378

Query: 379 FASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F ++L A +       G      + ++ G   +V   + ++D+  +SG L +A      M
Sbjct: 379 FLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSM 438

Query: 438 P-ERNIVSWNALISAC 452
           P + + V W  L+SAC
Sbjct: 439 PVQPDGVIWKTLLSAC 454



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 173/352 (49%), Gaps = 3/352 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +N +S N+LI GYVK+G+L TAR+LF+ M  R   +W  ++ G +      E+   F
Sbjct: 103 IPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFF 162

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR + G  PD     +L   C+         QVHA +++ G +  + + +SL   Y +
Sbjct: 163 FAMRRE-GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 221

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L       + +P  + VS N  I+G  + G  E A++ F  M+  G + +  TF +A
Sbjct: 222 CGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSA 281

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +++   LA +A G+Q+HA  +KT   + V V  +L+ +YS+  C+ ++ ++  E    D 
Sbjct: 282 VTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDL 341

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V  + MI+ Y ++   ++++ LF+++     + ++  F TLL   ++      G      
Sbjct: 342 VLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 401

Query: 301 TIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
              T  +   VK    +VD+  + G   EA+++  ++      V W  ++SA
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 37/323 (11%)

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L + RQ+H     + A ++   AN L+  YA  G F  A+ +F  +   + + W  +I  
Sbjct: 58  LPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGG 117

Query: 351 YVQKGNL-------------------------------EEALNLFIEMCRANISADQATF 379
           YV+ G+L                               EE+L  F  M R  +  D+   
Sbjct: 118 YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGL 177

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
            S+ R  A L  +  G+Q+H++V+RSG   ++  GS+L  MY + G L+D     + +P 
Sbjct: 178 GSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS 237

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
            NIVS N  IS   QNGDA+  L+ F  M  +G + ++V+ +S +++CS    + +G Q 
Sbjct: 238 LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG-QQ 296

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            +++  K  +        S+V +  R GC  ++E++  +     D ++ S++I++   H 
Sbjct: 297 IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS-GTDLVLCSAMISAYGFHG 355

Query: 560 NLEFAKKAADQLFKMEKLRDAAP 582
           +     + A  LFK      A P
Sbjct: 356 H----GQKAVGLFKQMMAAGAEP 374



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%)

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
           G ++EAL+      R  + ++   F+ I RA     +L L +QLH+F   SG  ++ F+ 
Sbjct: 27  GRVKEALHRRF---REGLWSEPGLFSHIFRACQ---ALPLLRQLHAFAATSGAAADRFTA 80

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           + LL  YA  G    A   F+ +P+RN++SWN LI    +NGD +   K F++M      
Sbjct: 81  NHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR--- 137

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
            +  +  ++++  ++ GL EE L +F +M ++  ++P +    S+
Sbjct: 138 -NVATWNAMVAGLTNSGLNEESLGFFFAM-RREGMQPDEYGLGSL 180


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/704 (35%), Positives = 403/704 (57%), Gaps = 40/704 (5%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFG--YNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +A L   C++     + + +H  I+       + + + N+L++ YCK   LD AR +F +
Sbjct: 81  YAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQ 140

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           MP+++ VS+  L++G+A+ GL  E   LF  M    F+P++F FA+ L A     D+  G
Sbjct: 141 MPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLAC-FRPNEFAFASVLCA-CEEQDVKYG 198

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSK---------HDCVVEARKLFGEMPEVDGVSYN 244
            QVHA  +K +   +V+VANAL+ +YSK              +A  +F  M   + +S+N
Sbjct: 199 LQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWN 258

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA-------------NKLDL 291
            MI+ + +     +++ LF  +        +F  +TLL V++             N   L
Sbjct: 259 SMISGFQFRGLGDKAIGLFAHMYCNGI---RFNSTTLLGVLSSLNHCMSTSDDINNTHHL 315

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG-RFEEAKEIFANLS-HISTVPWTAMIS 349
           +   Q+H  T+ +  ISEV+V  +LV  YA  G    +  ++F + S     V WTA+IS
Sbjct: 316 KNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIIS 375

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
            + ++ + E+A  LF ++ R N   D+ TF+  L+A A   +     ++HS V++ GF +
Sbjct: 376 VFAER-DPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHN 434

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           +    +AL+  Y +SGSL  + Q F EM   ++VSWN+++ + A +G A+  L  F+ M 
Sbjct: 435 DTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM- 493

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
                PDS + +++L+ACSH GL+EEG Q FNSMT+ + + P  +HY+ MVD+  R+G  
Sbjct: 494 --DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKI 551

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            EAE+L+ +MP +PD ++WSS++ SCR H   + AK AAD+ FK+   +++  Y+ MSNI
Sbjct: 552 FEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADK-FKVLDPKNSLAYIQMSNI 610

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           Y+  G +     ++K MR+  VRK    SWVE+  +VH FT+  + HP+   I  ++E L
Sbjct: 611 YSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETL 670

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN---TP-EGSPILVMKN 705
           + ++K+ GY P+   ALHD + E   + L +HSE++A+ FA++N   +P  G+ I +MKN
Sbjct: 671 IGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKN 730

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +R C DCH  +KL SK+  +EI VRDS+RFHHFK   CSC D+W
Sbjct: 731 IRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 238/477 (49%), Gaps = 38/477 (7%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN L++ Y K G+L  AR LF+ M  R  VSWT+L+ GY+Q    RE F LF  M     
Sbjct: 118 TNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML--AC 175

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI------- 121
             P+   FA++L  C E D    L QVHA  +K   +  + + N+L+  Y K        
Sbjct: 176 FRPNEFAFASVLCACEEQDVKYGL-QVHAAALKMSLDFSVYVANALITMYSKCSGGFGGS 234

Query: 122 --RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
             +  D A  VFK M  ++ +S+N++I+GF   GL ++AI LF  M   G + +  T   
Sbjct: 235 CDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLG 294

Query: 180 ALSA---GVGLAD-------IALGRQVHAFVVKTNFVENVFVANALLDLYSK-----HDC 224
            LS+    +  +D       +    Q+H   VK+  +  V V  AL+  Y+       DC
Sbjct: 295 VLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDC 354

Query: 225 VVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
                KLF +   E D VS+  +I+ +A  +  +++  LF +L    F   +  FS  L 
Sbjct: 355 F----KLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHRENFVLDRHTFSIALK 409

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             A  +  +   ++H+Q +     ++  V+N+L+  Y + G    ++++F  +     V 
Sbjct: 410 ACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVS 469

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W +M+ +Y   G  ++AL+LF +M   ++  D ATF ++L A +    +  G Q+ + + 
Sbjct: 470 WNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMT 526

Query: 404 RS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDA 458
            S G   ++   S ++D+Y ++G + +A +  ++MP + + V W++L+ +C ++G+A
Sbjct: 527 ESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEA 583



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 29/223 (13%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + +TV +N LI  Y +SG+LA + ++F  M     VSW  ++  Y+   + ++A  LF  
Sbjct: 433 HNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQ 492

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M       PD  TF  LL+ CS      E  Q+   + +  G    L   + +VD Y + 
Sbjct: 493 MDV----HPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRA 548

Query: 122 RCLDLARRVFKEMPQK-DSVSFNALITGFAKEG--------------LNEEAIKLFVEMQ 166
             +  A  + ++MP K DSV +++L+    K G              L+ +    +++M 
Sbjct: 549 GKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMS 608

Query: 167 HLGFKPSDFTFAAALSAGV---------GLADIALGRQVHAFV 200
           ++      F  A  +   +         GL+ + +G+QVH F 
Sbjct: 609 NIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFT 651


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/607 (37%), Positives = 356/607 (58%), Gaps = 4/607 (0%)

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPS-DFT-FAAALSAGVGLADIALGRQVHAFVVK 202
           +I+GF K    E++I++F +M  LG  P  D T   A L A   L ++ LG Q+    +K
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMV-LGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIK 59

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
             F  +V +   L+ L+SK   V  AR LFGE+ + D +S N MI+ +  N + ++S++L
Sbjct: 60  CGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRL 119

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           F+EL  +    S      L+ V +      +   IH   +    +S   V+ +L  +Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
                 A+++F   +  +   W AMIS   Q G  + A++LF  M + N++ +  T  SI
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L A A++ +LSLG+ +HS +  + F SNV+  +AL+DMYAK GS+  A + F  MPE+N 
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299

Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
           V+WNA+IS    +G  Q  LK F DM+ S  +P  ++ LSVL ACSH GL++EG   F++
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359

Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
           M   +   P  EHYA MVDIL R+G   +A + +  MP EP   +W +++ +C IHK+  
Sbjct: 360 MVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTN 419

Query: 563 FAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
            A  A+++LF+++   +   YV MSNIY+V  ++   + V++  +++ + K    + +E+
Sbjct: 420 LAHVASEKLFELDP-ENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEI 478

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
               HVFT+ D+ HPQ+  I  +++ L  +M + G++ +T+  LHD +EE K  ++K HS
Sbjct: 479 GQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHS 538

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E+LAIAF LI+T  G+ I ++KNLR C DCH   K +SKIT R I VRD++RFHHFKDG 
Sbjct: 539 EKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGL 598

Query: 743 CSCRDFW 749
           CSC D+W
Sbjct: 599 CSCGDYW 605



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 213/438 (48%), Gaps = 7/438 (1%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           +I G+ + + F ++ ++F DM    G   D  T   +L   +E       +Q+    IK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
           G+ S + +   L+  + K   +++AR +F E+ +KD +S NA+I+GF   G  E++++LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            E+   G + S  T    +          L   +H F VK   V +  V+ AL  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
           + ++ AR+LF E  E    S+N MI+    N     ++ LF+ +Q    + +    +++L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           S  A    L +G  +H+        S V V+ +L+DMYAKCG    A+E+F  +   + V
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSF 401
            W AMIS Y   G+ +EAL LF +M  +++     TF S+L A +    +  G  + H+ 
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ- 459
           V   GF       + ++D+  ++G LK A++  K MP E     W AL+ AC  + D   
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 460 ---ATLKSFE-DMVQSGY 473
              A+ K FE D    GY
Sbjct: 421 AHVASEKLFELDPENIGY 438



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 2/181 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + ++VST  L + Y +   +  AR+LF+   ++T  SW  +I G +Q      A  LF  
Sbjct: 165 SHSSVST-ALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQT 223

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+ +   +P+ VT  ++LS C++    +    VH+ I    + S + +  +L+D Y K  
Sbjct: 224 MQKN-NVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCG 282

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            + +AR +F  MP+K+ V++NA+I+G+   G  +EA+KLF +M     KP+  TF + L 
Sbjct: 283 SITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLY 342

Query: 183 A 183
           A
Sbjct: 343 A 343



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +  LI  Y K G++  ARELF+ M ++  V+W  +I GY      +EA KLF DM 
Sbjct: 267 NVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML 326

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQV-HADIIKFGYNSILIICNSLVDSYCKIRC 123
           +     P  +TF ++L  CS      E   + H  +  FG+  +      +VD   +   
Sbjct: 327 SS-SVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQ 385

Query: 124 LDLARRVFKEMP 135
           L  A    K MP
Sbjct: 386 LKKALEFIKAMP 397


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/661 (33%), Positives = 366/661 (55%), Gaps = 38/661 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  +F ++P+ D  ++  LI+G  + G  ++AI ++  +     +P  F   +   A
Sbjct: 27  LKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKA 86

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                D+ + +++H   ++  F +++ + NAL+D++ K   V  AR +F +M   D VS+
Sbjct: 87  CAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSW 146

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             M  CY      ++ + LFRE+       +    S++L   A+ + L  GR++H   + 
Sbjct: 147 TSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHGFILR 204

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 V V+++LV+MYA     ++A+ +F ++ H   V W  M++AY      E  L L
Sbjct: 205 NEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGL 264

Query: 364 FIEMCRANISADQA-----------------------------------TFASILRASAE 388
           F +M +  I  +QA                                   T  S L     
Sbjct: 265 FHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTN 324

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           L SL  GK++H +V R  F+ +V   +AL+ +YAK G L+ +   F  MP +++V+WN +
Sbjct: 325 LESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTM 384

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           I A + +G    +L  F  M+ SG +P+SV+ + VLS CSH  L +EGL  FNSM+ ++ 
Sbjct: 385 IMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHS 444

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P  +HY+ MVD+L R+G  +EA   + +MP EP    W +++ +CR++KN+E    AA
Sbjct: 445 ITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAA 504

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            QLF++E   +A  YV +SNI   A +W   S+++K MR++G+ K    SWV++K+KV+ 
Sbjct: 505 SQLFEIEP-DNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYS 563

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D+ + Q + I R ++ + ++M+ +GY+P+T   L + D+E + E+L  HSERLA+A
Sbjct: 564 FVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVA 623

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F ++N+   + + V KNLR C DCH AIKLI+KI G +I VRDS RFHHF+DG+C+C DF
Sbjct: 624 FGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDF 683

Query: 749 W 749
           W
Sbjct: 684 W 684



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 225/465 (48%), Gaps = 43/465 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI   + SG+L  A  LF+ + +    +WTILI G++Q    ++A  ++  + +     P
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRN-VRP 75

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D     ++   C+         ++H D I+FG+N  L++ N+L+D + K + ++ AR VF
Sbjct: 76  DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-I 190
            +M  KD VS+ ++   +   G+  + I LF EM   G + +  T ++ L A    AD I
Sbjct: 136 DDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPA---CADYI 192

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
            LGR+VH F+++     NV+V++AL+++Y+    + +AR +F  M   D VS+NVM+T Y
Sbjct: 193 KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS----------------------VVANK 288
             N++Y+  L LF +++      +Q  ++  +S                      +  N+
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNR 312

Query: 289 L-------------DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           +              L+ G++IH        I +V +  +LV +YAKCG  E ++ +F  
Sbjct: 313 ITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNT 372

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR--ASAELASLS 393
           +     V W  MI A    G   E+L LF +M  + +  +  TF  +L   + ++LA   
Sbjct: 373 MPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           L    +S         +    S ++D+ +++G L++A    ++MP
Sbjct: 433 L-LVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMP 476



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 166/363 (45%), Gaps = 39/363 (10%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N++ V  N LI  + K   +  AR +F+ MV +  VSWT +   Y      R+   LF +
Sbjct: 109 NKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFRE 168

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +G    + +T +++L  C++        +VH  I++      + + ++LV+ Y    
Sbjct: 169 MGLNG-IRANSLTVSSILPACADYIKLGR--EVHGFILRNEMEGNVYVSSALVNMYASSL 225

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGF----------------AKEGL------------ 154
            L  AR VF  M  +D VS+N ++T +                 KEG+            
Sbjct: 226 GLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAIS 285

Query: 155 -------NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
                  +E A+ +  +MQ  G KP+  T  +AL     L  +  G+++H +V +  F+E
Sbjct: 286 GCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIE 345

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           +V +  AL+ LY+K   +  +R +F  MP  D V++N MI   + + +  ESL LF ++ 
Sbjct: 346 DVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKML 405

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRF 326
            +  + +   F  +LS  ++      G  +        +I+ +    + +VD+ ++ GR 
Sbjct: 406 DSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRL 465

Query: 327 EEA 329
           EEA
Sbjct: 466 EEA 468



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 16/320 (5%)

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G  + A  +F  +       WT +IS + Q G  ++A++++  +   N+  D+    S+ 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           +A A    L + K++H   I+ GF  ++  G+AL+DM+ K   +  A   F +M  +++V
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SW ++       G  +  +  F +M  +G + +S+++ S+L AC+    I+ G +     
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD--YIKLGRE----- 197

Query: 504 TQKYKLRPKKEH--YAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
              + LR + E   Y S  +V++   S    +A  +   M +  D + W+ ++ +  ++K
Sbjct: 198 VHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM-YHRDIVSWNVMLTAYFLNK 256

Query: 560 NLEFAKKAADQLFKME-KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR--KVTA 616
             E       Q+ K   KL  A+   A+S      GQ E    +   M++ G++  ++T 
Sbjct: 257 EYERGLGLFHQMRKEGIKLNQASWNAAISGCMQ-NGQHELALGILCKMQDSGIKPNRITI 315

Query: 617 YSWVELKSKVHVFTANDELH 636
            S +   + +       E+H
Sbjct: 316 VSALPGCTNLESLRGGKEIH 335


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/654 (36%), Positives = 372/654 (56%), Gaps = 6/654 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF--KLFVDMRTD 66
           TN L++ Y K G++  A+ +F S+ ++  VSW  LI GYSQK     +F  +LF  MR +
Sbjct: 48  TNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAE 107

Query: 67  GGSDPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             + P+  TF+ + +  S  P+T   L Q HA  IK      + + +SL++ YCKI C+ 
Sbjct: 108 N-TLPNGHTFSGVFTAASSSPETFGGL-QAHALAIKTSNFYDVFVGSSLINMYCKIGCML 165

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR+VF  +P++++VS+  +I+G+A E +  EA +LF  M+        F + + LSA  
Sbjct: 166 DARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALT 225

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
               +  G+Q+H   +K   +    V NAL+ +Y K  C+ +A K F    + D ++++ 
Sbjct: 226 VPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSA 285

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MIT YA      E+L LF  +       S+F F  +++  ++   L+ G+QIH  ++   
Sbjct: 286 MITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG 345

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
              ++    +LVDMYAKCG   +A++ F  L     V WT+MIS Y Q G  E AL L+ 
Sbjct: 346 YECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYC 405

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M    I   + T AS+LRA + LA+L  GKQ+H+  I+ GF   V  GSAL  MYAK G
Sbjct: 406 RMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCG 465

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL+D    F+ MP R+I++WNA+IS  +QNG+    L+ FE++     +PD V+ ++VLS
Sbjct: 466 SLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLS 525

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL+E G  YF  M  ++ + P+ EHYA MVDIL R+G   E ++ +     +   
Sbjct: 526 ACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGM 585

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +W  ++ +CR ++N E    A ++L ++   ++++ Y+ +S+IY   G+ + V +V++ 
Sbjct: 586 CLWRILLGACRNYRNYELGAYAGEKLMELGS-QESSAYILLSSIYTALGRSDDVERVRRL 644

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
           M+ RGV K    SW+ELKS+VHVF   D++HPQ  +I  ++  L   MK E Y+
Sbjct: 645 MKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYE 698



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 162/542 (29%), Positives = 283/542 (52%), Gaps = 13/542 (2%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P + +F  LL  C+      +   +HA +++ G  S + + NSLV+ Y K   +  A+ V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEA--IKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           F+ +  KD VS+N LI G++++G    +  ++LF  M+     P+  TF+   +A     
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +   G Q HA  +KT+   +VFV ++L+++Y K  C+++ARK+F  +PE + VS+  +I+
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            YA      E+ +LF  ++       +F ++++LS +     +  G+QIH   +    +S
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
              V N+LV MY KCG  ++A + F        + W+AMI+ Y Q G+  EALNLF  M 
Sbjct: 248 IASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH 307

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
                  + TF  ++ A +++ +L  GKQ+H + +++G+   ++  +AL+DMYAK GSL 
Sbjct: 308 LNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLV 367

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F  + E +IV W ++IS  AQNG+ +  L  +  M      P  +++ SVL ACS
Sbjct: 368 DARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACS 427

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
               +E+G Q  ++ T KY    +    +++  +  + G  ++   +  +MP   D + W
Sbjct: 428 SLAALEQGKQ-IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTW 485

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP---YVAMSNIYAVAGQWESVSQVKKA 605
           +++I+   + +N E  K  A +LF  E+LR       YV   N+ +       V + K  
Sbjct: 486 NAMISG--LSQNGEGLK--ALELF--EELRHGTTKPDYVTFVNVLSACSHMGLVERGKVY 539

Query: 606 MR 607
            R
Sbjct: 540 FR 541


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/659 (35%), Positives = 389/659 (59%), Gaps = 6/659 (0%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            + N    + L+S Y K G +  A+++F+++ ++  V W  ++GGY Q     E  +LF +
Sbjct: 359  HSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFN 418

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            M++  G  PD  T++++LS C+     +   Q+H+ IIK  + S L + N+LVD Y K  
Sbjct: 419  MKS-CGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSG 477

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             L+ AR+ F+ +  +D+VS+N +I G+ +E    EA  LF  M  LG  P + + A+ LS
Sbjct: 478  ALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILS 537

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A   +  +  G+QVH   VKT     ++  ++L+D+Y+K   +  A K+   MPE   VS
Sbjct: 538  ACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVS 597

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             N +I  YA     ++++ LFR++     + ++  F++LL     +  L +GRQIH+  +
Sbjct: 598  MNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLIL 656

Query: 303  -VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEA 360
             +   + +  +  SL+ MY    R  +A  +F+  S+  S V WTAMIS   Q      A
Sbjct: 657  KMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVA 716

Query: 361  LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            L L+ EM   N+  DQATF S LRA A ++S+  G + HS +  +GF S+  + SAL+DM
Sbjct: 717  LQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDM 776

Query: 421  YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            YAK G +K ++Q FKEM  +++++SWN++I   A+NG A+  L+ F++M QS   PD V+
Sbjct: 777  YAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVT 836

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             L VL+ACSH G + EG   F+ M   Y ++P+ +H A MVD+L R G   EAE+ + ++
Sbjct: 837  FLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKL 896

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
             FEPD  +W++++ +CRIH +    ++AA++L ++E  ++++PYV +SNIYA +G W+ V
Sbjct: 897  NFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEP-QNSSPYVLLSNIYAASGNWDEV 955

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + +++ MRE+GV+K+   SW+ +  + ++F A D+ H   +EI   +++L   M++  Y
Sbjct: 956  NTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDY 1014



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 175/534 (32%), Positives = 270/534 (50%), Gaps = 37/534 (6%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           V  N+++  Y K  ++  A   F  + D+  ++W  ++  +S K  F      +  +  +
Sbjct: 95  VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHS-KQGFPHLVVKYFGLLWN 153

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
            G  P+  TFA +LS C+  +      QVH +++K G+ SI     +L+  Y K   L  
Sbjct: 154 SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTD 213

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR +F    + D VS+ ++I G+ K GL EEA+K+F EM+ +G +P    F   ++A V 
Sbjct: 214 ARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVD 273

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
                LGR                     LD          A  LF  MP  + V++N+M
Sbjct: 274 -----LGR---------------------LD---------NASDLFSRMPNRNVVAWNLM 298

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ +A      E+++ F+ ++      ++    ++LS +A+   L  G  +H + +    
Sbjct: 299 ISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGL 358

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S V V +SLV MYAKCG+ E AK++F  L+  + V W AM+  YVQ G   E + LF  
Sbjct: 359 HSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFN 418

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M       D  T++SIL A A L  L LG QLHS +I++ F SN+F G+AL+DMYAKSG+
Sbjct: 419 MKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGA 478

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L+DA Q F+ +  R+ VSWN +I    Q  D       F  M   G  PD VSL S+LSA
Sbjct: 479 LEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSA 538

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           C+    +E+G Q  + ++ K     K    +S++D+  + G  D A K++A MP
Sbjct: 539 CASVRGLEQGKQ-VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 197/643 (30%), Positives = 305/643 (47%), Gaps = 76/643 (11%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K   L  AR +F+  V+   VSWT +IGGY +     EA K+F +M   G  +P
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVG-QEP 259

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D V F T+                                   +++Y  +  LD A  +F
Sbjct: 260 DQVAFVTV-----------------------------------INAYVDLGRLDNASDLF 284

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MP ++ V++N +I+G AK G   EAI+ F  M+  G K +  T  + LSA   LA + 
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G  VHA  +K     NV+V ++L+ +Y+K   +  A+K+F  + E + V +N M+  Y 
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N    E ++LF  ++   F    F +S++LS  A    L +G Q+H+  I     S + 
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V N+LVDMYAK G  E+A++ F  + +   V W  +I  YVQ+ +  EA +LF  M    
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D+ + ASIL A A +  L  GKQ+H   +++G  + ++SGS+L+DMYAK G++  A 
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS--- 488
           +    MPER++VS NALI+  AQ    QA +  F DM+  G     ++  S+L AC    
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINLEQA-VNLFRDMLVEGINSTEITFASLLDACHEQQ 643

Query: 489 --------HCGLIEEGLQ-------------YFNSM--TQKYKL-----RPKKE-HYASM 519
                   H  +++ GLQ             Y NS+  T    L      PK    + +M
Sbjct: 644 KLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAM 703

Query: 520 VDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           +  L ++ C   A +L  +M      PD+  + S + +C +  +++   +    +F    
Sbjct: 704 ISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGF 763

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
             D     A+ ++YA  G  +S  QV K M     RK    SW
Sbjct: 764 DSDELTSSALVDMYAKCGDVKSSMQVFKEMS----RKKDVISW 802



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/584 (27%), Positives = 281/584 (48%), Gaps = 76/584 (13%)

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN 143
           S+  T N++I  HA  +K G+ S  ++ N +VD Y K   +D A R FK++  KD +++N
Sbjct: 72  SQFSTTNKII--HAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWN 129

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           ++++  +K+G     +K F  + + G  P++FTFA  LS+   L  +  GRQVH  VVK 
Sbjct: 130 SILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKM 189

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
            F    +   AL+ +Y+K + + +AR +F    E+D VS+  MI  Y      +E++K+F
Sbjct: 190 GFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVF 249

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           +E++    +  Q  F                               V V N+ VD+    
Sbjct: 250 QEMEKVGQEPDQVAF-------------------------------VTVINAYVDL---- 274

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           GR + A ++F+ + + + V W  MIS + + G   EA+  F  M +A I + ++T  S+L
Sbjct: 275 GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVL 334

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A A LA+L  G  +H+  ++ G  SNV+ GS+L+ MYAK G ++ A + F  + E+N+V
Sbjct: 335 SAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WNA++    QNG A   ++ F +M   G+ PD  +  S+LSAC+    ++ G Q  +S+
Sbjct: 395 LWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQ-LHSV 453

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAE------------------------------ 533
             K K         ++VD+  +SG  ++A                               
Sbjct: 454 IIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEA 513

Query: 534 ----KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
               + M  +   PDE+  +S++++C   + LE  K+      K  +        ++ ++
Sbjct: 514 FHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDM 573

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTA----YSWVELKSKVHVF 629
           YA  G  +S  ++   M ER V  + A    Y+ + L+  V++F
Sbjct: 574 YAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLEQAVNLF 617



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 163/358 (45%), Gaps = 44/358 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N LI+G                               Y+Q N   +A  LF
Sbjct: 590 MPERSVVSMNALIAG-------------------------------YAQIN-LEQAVNLF 617

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY---NSILIICNSLVDS 117
            DM  +G +  + +TFA+LL  C E    N   Q+H+ I+K G    +  L +  SL+  
Sbjct: 618 RDMLVEGINSTE-ITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGV--SLLGM 674

Query: 118 YCK-IRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
           Y   +R  D A  +F E    K +V + A+I+G ++   +  A++L+ EM+     P   
Sbjct: 675 YMNSLRTTD-ASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQA 733

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           TF +AL A   ++ I  G + H+ +  T F  +   ++AL+D+Y+K   V  + ++F EM
Sbjct: 734 TFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEM 793

Query: 236 P-EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
             + D +S+N MI  +A N   +++L++F E++ +        F  +L+  ++   +  G
Sbjct: 794 SRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEG 853

Query: 295 RQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           R I    +    +         +VD+  + G  +EA+E    L+       W  M+ A
Sbjct: 854 RLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGA 911


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/659 (33%), Positives = 369/659 (55%), Gaps = 2/659 (0%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
            L QV+  +I  G +    +    +++      ++ A + F+E+ + D + +NA+I G+ 
Sbjct: 17  HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 76

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           ++ + +  I+++++MQ     P+ FTF   L A  G +   +G+Q+H    K  F  NVF
Sbjct: 77  QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 136

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           V N+L+ +Y+K   +  AR +F ++ +   VS+  +I+ Y  N    E+L +F+E++   
Sbjct: 137 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 196

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                    ++++   N  DL  G+ IH          E  +  SL  MYAK G  E A+
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVAR 256

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
             F  +   + + W AMIS Y   G  EEA+ LF EM   NI  D  T  S + ASA++ 
Sbjct: 257 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL L + L  ++ +S +  + F  + L+DMYAK GS+  A   F  + ++++V W+ +I 
Sbjct: 317 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 376

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
               +G  Q  +  + +M Q+G  P+  + + +L+AC + GL++EG + F+ M   + + 
Sbjct: 377 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIE 435

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P  +HY+ +VD+L R+G  ++A   +  MP +P   +W +++++C+IH+ +   + AA+Q
Sbjct: 436 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQ 495

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF ++   +   YV +SN+YA A  W  V+ V+  M ++G+ K   +S +E+   +  F 
Sbjct: 496 LFILDPY-NTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 554

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
             D  HP++ EI  +++ L + +K  GY P     LHD + E   E+L +HSERLA+A+ 
Sbjct: 555 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 614

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           +I+T  G+ + + KNLRAC +CH+AIKLISK+  REI +RD+ RFHHFKDG CSC DFW
Sbjct: 615 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 203/434 (46%), Gaps = 2/434 (0%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           G++  A + F  + +   + W  +I GY+QKN      ++++DM+      P+  TF  +
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ-VHPNCFTFLYV 106

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           L  C          Q+H    K+G+ S + + NSLV  Y K   +  AR VF ++  +  
Sbjct: 107 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 166

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+ ++I+G+ + G   EA+ +F EM+    KP      + ++A   + D+  G+ +H  
Sbjct: 167 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           V K        +  +L  +Y+K   V  AR  F  M + + + +N MI+ YA N   +E+
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
           +KLFRE+             + +   A    L++ R +      +    +  V   L+DM
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           YAKCG    A+ +F  ++    V W+ MI  Y   G+ +EA+ L+ EM +A +  +  TF
Sbjct: 347 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTF 406

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
             +L A      +  G +L   +   G   +    S ++D+  ++G L  A      MP 
Sbjct: 407 IGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466

Query: 440 RNIVS-WNALISAC 452
           +  VS W AL+SAC
Sbjct: 467 KPGVSVWGALLSAC 480



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 168/347 (48%), Gaps = 2/347 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+S Y K G ++ AR +F+ + DRT VSWT +I GY Q     EA  +F +MR
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 PD++   ++++  +  +   +   +H  + K G      I  SL   Y K   +
Sbjct: 194 -QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLV 252

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           ++AR  F  M + + + +NA+I+G+A  G  EEAIKLF EM     +    T  +A+ A 
Sbjct: 253 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 312

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             +  + L R +  ++ K+ + ++ FV   L+D+Y+K   +  AR +F  + + D V ++
Sbjct: 313 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 372

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           VMI  Y  +   +E++ L+ E++      +   F  LL+   N   ++ G ++       
Sbjct: 373 VMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH 432

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
                 +  + +VD+  + G   +A +   ++     V  W A++SA
Sbjct: 433 GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/727 (33%), Positives = 379/727 (52%), Gaps = 72/727 (9%)

Query: 46  GYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
            Y Q N    AF L+  M ++     +Y T+  L+  CS   +  E  QVH  ++K G++
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNY-TYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
           S + + N+L++ +     +  A RVF E    DSVS+N+++ G+ + G  EEA  ++ +M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
                                                     ++  +N+++ L+     V
Sbjct: 306 PE---------------------------------------RSIIASNSMIVLFGMRGLV 326

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
           VEA KLF EM E D V+++ +I C+  NE Y+E+++ F  +        +    + LS  
Sbjct: 327 VEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSAC 386

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR-------FEEA--------- 329
           AN L + +G+ IH+ ++     S + + N+L+ MY+KCG        F+EA         
Sbjct: 387 ANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWN 446

Query: 330 ---------------KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
                          K IF ++     V W++MIS Y Q    +E L LF EM  +    
Sbjct: 447 SMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP 506

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D+ T  S++ A A LA+L  GK +H+++ R+G   NV  G+ L+DMY K G ++ A++ F
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M E+ I +WNALI   A NG  +++L  F +M +    P+ ++ + VL AC H GL++
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG  +F SM   +K++P  +HY  MVD+L R+G   EAE+L+ +MP  PD   W +++ +
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C+ H + E  ++   +L +++   D   +V +SNIYA  G+W+ V +++  M +  V K+
Sbjct: 687 CKKHGDSEMGRRVGRKLIELQPDHDGF-HVLLSNIYASKGKWDDVLEIRGMMTKHRVLKI 745

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
              S +E    +H F A D+ HP  + I   +  +  ++K EGY PD +  L D DEE K
Sbjct: 746 PGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEK 805

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
             +L  HSE+LAIAF LIN    +PI +MKNLR C DCH A KLISK   R+I VRD  R
Sbjct: 806 ESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHR 865

Query: 735 FHHFKDG 741
           FHHF+ G
Sbjct: 866 FHHFEQG 872



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 226/500 (45%), Gaps = 75/500 (15%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ +    N+  A  +FN      +VSW  ++ GY +     EA  ++  M      
Sbjct: 252 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM------ 305

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                           P+ +  +I  ++ I+ FG   +++         CK+        
Sbjct: 306 ----------------PERS--IIASNSMIVLFGMRGLVV-------EACKL-------- 332

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F EM +KD V+++ALI  F +  + EEAI+ FV M  +G    +    +ALSA   L  
Sbjct: 333 -FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 391

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT- 248
           + +G+ +H+  +K      + + NAL+ +YSK   ++ ARKLF E   +D +S+N MI+ 
Sbjct: 392 VNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISG 451

Query: 249 ---C---------------------------YAWNEQYKESLKLFRELQFTRFDRSQFPF 278
              C                           YA N+ + E+L LF+E+Q + F   +   
Sbjct: 452 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 511

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            +++S  A    L+ G+ +H           V +  +L+DMY KCG  E A E+F  +  
Sbjct: 512 VSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 571

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK-Q 397
                W A+I      G +E +L++F  M + +++ ++ TF  +L A   +  +  G+  
Sbjct: 572 KGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHH 631

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
            +S +       NV     ++D+  ++G L++A +    MP   ++ +W AL+ AC ++G
Sbjct: 632 FYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 691

Query: 457 DAQATLKSFEDMVQSGYQPD 476
           D++   +    +++   QPD
Sbjct: 692 DSEMGRRVGRKLIE--LQPD 709



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 34/391 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +++N +I  +   G +  A +LF+ M+++  V+W+ LI  + Q   + EA + F
Sbjct: 305 MPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 364

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------- 107
           V M   G    D V   + LS C+     N    +H+  +K G  S              
Sbjct: 365 VGMHKIGVM-VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 423

Query: 108 ------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
                             LI  NS++  Y K   +D A+ +F  MP+KD VS++++I+G+
Sbjct: 424 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 483

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+  L +E + LF EMQ  GFKP + T  + +SA   LA +  G+ VHA++ +     NV
Sbjct: 484 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 543

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            +   L+D+Y K  CV  A ++F  M E    ++N +I   A N   + SL +F  ++  
Sbjct: 544 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 603

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEE 328
               ++  F  +L    +   +  G+      I    I   VK    +VD+  + G+ +E
Sbjct: 604 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 663

Query: 329 AKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           A+E+   +     V  W A++ A  + G+ E
Sbjct: 664 AEELLNRMPMTPDVATWGALLGACKKHGDSE 694



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 59/356 (16%)

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           +P  A   AY+Q  +   A  L+  M    + AD  T+  +++A +   S    KQ+H+ 
Sbjct: 179 MPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNH 238

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           V++ GF S+V+  + L++ ++   ++ DA + F E    + VSWN++++   + G+ +  
Sbjct: 239 VLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEA 298

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
              +  M +       ++  S++      GL+ E  + F+ M +K  +      +++++ 
Sbjct: 299 KHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT-----WSALIA 349

Query: 522 ILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCR----------IHK--------- 559
              ++  ++EA +    M ++    DE++  S +++C           IH          
Sbjct: 350 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 409

Query: 560 --NLEFA-----KKAAD-----QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
             NL+ A      K  D     +LF    L D   + +M + Y      ++   +  +M 
Sbjct: 410 YINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 469

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           E+ V      SW  + S      A ++L  +T         L QEM+  G+KPD +
Sbjct: 470 EKDV-----VSWSSMISGY----AQNDLFDETLA-------LFQEMQMSGFKPDET 509



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 26/182 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +    LI  Y+K G + TA E+F  M+++   +W  LI G +       +  +F +M+
Sbjct: 542 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE-------LIQVH---ADIIKFGYNSILIICNSL 114
                 P+ +TF  +L  C      +E       +I  H    ++  +G          +
Sbjct: 602 K-CHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG---------CM 651

Query: 115 VDSYCKIRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKL---FVEMQ--HL 168
           VD   +   L  A  +   MP   D  ++ AL+    K G +E   ++    +E+Q  H 
Sbjct: 652 VDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 711

Query: 169 GF 170
           GF
Sbjct: 712 GF 713


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/744 (33%), Positives = 408/744 (54%), Gaps = 59/744 (7%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           + N+ I+   + G +  AR+LF+S   ++  SW  ++ GY      R+A KLF +M    
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
             D + +++  L+SG  +    +E  +V  D++       ++   +LV  Y     +D+A
Sbjct: 75  -PDRNIISWNGLVSGYMKNGEIDEARKVF-DLMP---ERNVVSWTALVKGYVHNGKVDVA 129

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
             +F +MP+K+ VS+  ++ GF ++G  ++A KL+ EM        D             
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EM----IPDKD------------- 171

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
            +IA    +H                       K   V EAR++F EM E   +++  M+
Sbjct: 172 -NIARTSMIHGLC--------------------KEGRVDEAREIFDEMSERSVITWTTMV 210

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T Y  N +  ++ K+F  +     ++++  ++++L        ++   ++     V   I
Sbjct: 211 TGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +     N+++    + G   +A+ +F ++   +   W  +I  + + G   EAL+LFI M
Sbjct: 267 A----CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  +     T  SIL   A LASL  GKQ+H+ ++R  F  +V+  S L+ MY K G L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSA 486
             +   F   P ++I+ WN++IS  A +G  +  LK F +M  SG  +P+ V+ ++ LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS+ G++EEGL+ + SM   + ++P   HYA MVD+L R+G F+EA +++  M  EPD  
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W S++ +CR H  L+ A+  A +L ++E   ++  Y+ +SN+YA  G+W  V++++K M
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEP-ENSGTYILLSNMYASQGRWADVAELRKLM 561

Query: 607 RERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           + R VRK    SW E+++KVH FT      HP+   I + ++ L   +++ GY PD S A
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYA 621

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           LHD DEE KV SLKYHSERLA+A+AL+   EG PI VMKNLR C+DCH AIK+ISK+  R
Sbjct: 622 LHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKER 681

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD++RFHHF++G CSC+D+W
Sbjct: 682 EIILRDANRFHHFRNGECSCKDYW 705



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 224/457 (49%), Gaps = 24/457 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP++N +S N L+SGY+K+G +  AR++F+ M +R  VSWT L+ GY    +   A  LF
Sbjct: 74  MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  +    ++  +++ ++I    N   I   S++   CK
Sbjct: 134 WKM-----PEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDN---IARTSMIHGLCK 184

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +D AR +F EM ++  +++  ++TG+ +    ++A K+F  M     + ++ ++ + 
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSM 240

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L   V    I    ++   +     V+ V   NA++    +   + +AR++F  M E + 
Sbjct: 241 LMGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHT 299
            S+  +I  +  N    E+L LF  +Q  +  R  FP   ++LSV A+   L  G+Q+H 
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISILSVCASLASLHHGKQVHA 355

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
           Q +      +V VA+ L+ MY KCG   ++K IF        + W ++IS Y   G  EE
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415

Query: 360 ALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SA 416
           AL +F EM    +   ++ TF + L A +    +  G +++   + S F     +   + 
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPITAHYAC 474

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++DM  ++G   +A++    M  E +   W +L+ AC
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 230/496 (46%), Gaps = 65/496 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+++ ++   +I G  K G +  ARE+F+ M +R+ ++WT ++ GY Q N+  +A K+F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                D   +   V++ ++L G  +    N  I+   ++ +      +I CN+++    +
Sbjct: 227 -----DVMPEKTEVSWTSMLMGYVQ----NGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  ARRVF  M +++  S+  +I    + G   EA+ LF+ MQ  G +P+  T  + 
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS    LA +  G+QVHA +V+  F  +V+VA+ L+ +Y K   +V+++ +F   P  D 
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHT 299
           + +N +I+ YA +   +E+LK+F E+  +   + ++  F   LS  +    ++ G +I+ 
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457

Query: 300 QTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                  +  +    + +VDM  + GRF EA E+  +++       W +++ A       
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA------- 510

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
                     CR +   D A F +  +   E+   + G  +         +SN       
Sbjct: 511 ----------CRTHSQLDVAEFCA--KKLIEIEPENSGTYI--------LLSN------- 543

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNI-----VSWNAL---ISACAQNG-----DAQATLKS 464
             MYA  G   D  +  K M  R +      SW  +   + A  + G     + ++ LK 
Sbjct: 544 --MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601

Query: 465 FED----MVQSGYQPD 476
            ++    + ++GY PD
Sbjct: 602 LDELDGLLREAGYNPD 617


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/777 (30%), Positives = 400/777 (51%), Gaps = 76/777 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K   +  A ++F+    +    W  ++    +  ++ +A +LF  M++      
Sbjct: 172 LINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKAT 231

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   LL  C +    NE  Q+H  +I+FG  S   ICNS+V  Y +   L+LAR  F
Sbjct: 232 D-GTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAF 290

Query: 132 -------------------------------KEMP----QKDSVSFNALITGFAKEGLNE 156
                                          +EM     + D +++N+L++G   +G  E
Sbjct: 291 DSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYE 350

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
             +  F  +Q  GFKP   +  +AL A +GL    LG+++H +++++    +V+V  +L+
Sbjct: 351 NVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLV 410

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D Y K+DC+ +A  +F      +  ++N +I+ Y +   +  + KL  +++    +    
Sbjct: 411 DKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMK----EEGIK 466

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           P                               ++   NSLV  Y+  GR EEA  +   +
Sbjct: 467 P-------------------------------DLVTWNSLVSGYSMSGRSEEALAVINRI 495

Query: 337 SHISTVP----WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
             +   P    WTAMIS   Q  N  +AL  F +M   N+  +  T  ++LRA A  + L
Sbjct: 496 KSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLL 555

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            +G+++H F +R GF+ +++  +AL+DMY K G LK A + F+ + E+ +  WN ++   
Sbjct: 556 KIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           A  G  +     F++M ++G +PD+++  ++LS C + GL+ +G +YF+SM   Y + P 
Sbjct: 616 AIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPT 675

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            EHY+ MVD+L ++G  DEA   +  +P + D  +W +V+ +CR+HK+++ A+ AA  L 
Sbjct: 676 IEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLL 735

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           ++E   ++A Y  M NIY+   +W  V ++K++M   GV+    +SW+++K  +HVF+  
Sbjct: 736 RLEPY-NSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTE 794

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
            + HP+  EI  ++  L+ E+KK GY  D +C   + D+  K + L  H+E+LA+ + L+
Sbjct: 795 GKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKEKVLLSHTEKLAMTYGLM 854

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T  GSPI V+KN R C DCH   K IS    REI +RD  RFHHF +G CSC+D W
Sbjct: 855 KTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFMNGECSCKDRW 911



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/628 (23%), Positives = 273/628 (43%), Gaps = 61/628 (9%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICN-SLVDSYCKIRCLDLARRVFKEM 134
           F+       E  T N + ++HA IIK      L+  + S++ +Y +    + A +VF   
Sbjct: 31  FSPFFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVG 90

Query: 135 PQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
             ++ + +N+ I  FA   G + E + +F E+   G K         L   + L ++ LG
Sbjct: 91  FARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
            +VHA +VK  F  +V ++ AL++LY K+  +  A ++F E P  +   +N ++     +
Sbjct: 151 MEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRS 210

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           E+++++L+LFR +Q      +      LL        L  G+QIH   I    +S   + 
Sbjct: 211 EKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY---------------------- 351
           NS+V MY++  R E A+  F +    ++  W ++IS+Y                      
Sbjct: 271 NSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVK 330

Query: 352 -------------VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
                        + +G+ E  L  F  +  A    D  +  S L+A   L   +LGK++
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEI 390

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H +++RS    +V+  ++L+D Y K+  L  A   F     +NI +WN+LIS     G  
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLF 450

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
               K    M + G +PD V+  S++S  S  G  EE L   N + +   L P    + +
Sbjct: 451 DNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRI-KSLGLTPNVVSWTA 509

Query: 519 MVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           M+   C++  + +A +  +QM  E   P+     +++ +C     L+  ++     F M 
Sbjct: 510 MISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEI--HCFSMR 567

Query: 576 K--LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
              L D     A+ ++Y   G+ +   +V + ++E+     T   W  +     ++   +
Sbjct: 568 HGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEK-----TLPCWNCMMMGYAIYGHGE 622

Query: 634 ELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           E           +  L  EM+K G +PD
Sbjct: 623 E-----------VFTLFDEMRKTGVRPD 639



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 211/492 (42%), Gaps = 69/492 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT   N ++S Y ++  L  AR  F+S  D  + SW  +I  Y+  +    A+ L  +M 
Sbjct: 266 NTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEME 325

Query: 65  TDGGSDPDYVTFATLLSG--------------------------CSEPDTANELI----- 93
           + G   PD +T+ +LLSG                          CS       +I     
Sbjct: 326 SSG-VKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCF 384

Query: 94  ----QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
               ++H  I++      + +C SLVD Y K  CLD A  VF     K+  ++N+LI+G+
Sbjct: 385 NLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGY 444

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
             +GL + A KL  +M+  G KP D     +L +G  ++    GR   A  V        
Sbjct: 445 TYKGLFDNAEKLLNQMKEEGIKP-DLVTWNSLVSGYSMS----GRSEEALAV-------- 491

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
                           +   K  G  P V  VS+  MI+    NE Y ++L+ F ++Q  
Sbjct: 492 ----------------INRIKSLGLTPNV--VSWTAMISGCCQNENYMDALQFFSQMQEE 533

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               +     TLL   A    L+IG +IH  ++    + ++ +A +L+DMY K G+ + A
Sbjct: 534 NVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVA 593

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            E+F N+   +   W  M+  Y   G+ EE   LF EM +  +  D  TF ++L      
Sbjct: 594 HEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNS 653

Query: 390 ASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNA 447
             +  G K   S          +   S ++D+  K+G L +A+     +P++   S W A
Sbjct: 654 GLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGA 713

Query: 448 LISACAQNGDAQ 459
           +++AC  + D +
Sbjct: 714 VLAACRLHKDIK 725


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/504 (40%), Positives = 318/504 (63%), Gaps = 1/504 (0%)

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           M+  Y      K++L+LF  +  +     Q   +T        + L  G+QIH   I   
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             S++ V + ++DMY KCG    A  +F  +S    V WT+MIS  V  GN ++AL ++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M ++ +  D+ TFA++++AS+ + +L  G+QLH+ VI+   +S+ F G++L+DMYAK G
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           +++DA + FK+M  RNI  WNA++   AQ+G+A+  +  F+ M   G +PD VS + +LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH GL  E  +Y +SM   Y + P+ EHY+ +VD L R+G   EA+K++  MPF+   
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
            +  +++ +CRI  ++E  K+ A +LF +E   D+A YV +SNIYA A +W+ V+  +K 
Sbjct: 301 SINRALLGACRIQGDVEXGKRVAARLFALEPF-DSAAYVLLSNIYAAANRWDDVTDARKM 359

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M+ + V+K   +SW+++K+ +H+F  +D  HPQ + I  K+E +M+ ++++GY PDT   
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
           L D ++E K  SL YHSE+LAIA+ LI+TP  + I V+KNLR C DCH AIK ISK+  R
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI +RD++RFHHF+DG CSC D+W
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 2/317 (0%)

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           ++ G+      ++A++LF  +   G K    T A A  A   L  +  G+Q+HA  +K  
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F  ++ V + +LD+Y K   +V A  +F  +   D V++  MI+    N    ++L+++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            ++ +R    ++ F+TL+   +    L+ GRQ+H   I    +S+  V  SLVDMYAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E+A  +F  ++  +   W AM+    Q GN EEA+NLF  M    I  D+ +F  IL 
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 385 ASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           A +     S   + LHS     G    +   S L+D   ++G +++A +  + MP +   
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300

Query: 444 SWN-ALISACAQNGDAQ 459
           S N AL+ AC   GD +
Sbjct: 301 SINRALLGACRIQGDVE 317



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 154/307 (50%), Gaps = 12/307 (3%)

Query: 46  GYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN 105
           GY   N  ++A +LF  +    G   D +T AT    C      ++  Q+HA  IK G++
Sbjct: 4   GYIIGNDGKKALELF-SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 62

Query: 106 SILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV 163
           S L + + ++D Y  I+C D+  A  VF  +   D V++ ++I+G    G  ++A++++ 
Sbjct: 63  SDLHVNSGILDMY--IKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
            M+     P ++TFA  + A   +  +  GRQ+HA V+K + V + FV  +L+D+Y+K  
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            + +A +LF +M   +   +N M+   A +   +E++ LF+ ++    +  +  F  +LS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 284 VVANK-LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
             ++  L  +    +H+         E++  + LVD   + G  +EA ++      I T+
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV------IETM 294

Query: 343 PWTAMIS 349
           P+ A  S
Sbjct: 295 PFKASAS 301



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 125/283 (44%), Gaps = 6/283 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++  Y+K G++  A  +FN +     V+WT +I G        +A +++  MR      P
Sbjct: 71  ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM-P 129

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  TFATL+   S      +  Q+HA++IK    S   +  SLVD Y K   ++ A R+F
Sbjct: 130 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 189

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
           K+M  ++   +NA++ G A+ G  EEA+ LF  M+  G +P   +F   LSA    GL  
Sbjct: 190 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 249

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--VMI 247
            A    +H+          +   + L+D   +   V EA K+   MP     S N  ++ 
Sbjct: 250 EAY-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
            C    +         R      FD + +   + +   AN+ D
Sbjct: 309 ACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWD 351


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/658 (34%), Positives = 384/658 (58%), Gaps = 5/658 (0%)

Query: 3    NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            + N    + LI+ YVK G ++ A+++F+   ++  V W  ++ G+ Q     E  ++F  
Sbjct: 356  DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQY 415

Query: 63   MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            MR     + D  TF ++L  C    + +   QVH   IK G ++ L + N+++D Y K+ 
Sbjct: 416  MRR-ADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474

Query: 123  CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             +D+A+ +F  +P KDSVS+NALI G A      EAI +   M+  G    + +FA A++
Sbjct: 475  AIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAIN 534

Query: 183  AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            A   +  I  G+Q+H+  +K N   N  V ++L+DLYSK   V  +RK+   +     V 
Sbjct: 535  ACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVP 594

Query: 243  YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
             N +IT    N +  E+++LF+++    F  S F F+++LS     +   IG+Q+H  T+
Sbjct: 595  INALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTL 654

Query: 303  VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEEA 360
             +  +++   +  SLV +Y KC   E+A ++   +  H + V WTA IS Y Q G   ++
Sbjct: 655  KSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQS 714

Query: 361  LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
            L +F  M   ++ +D+ATF S+L+A +E+A+L+ GK++H  +++SGF+S   + SAL+DM
Sbjct: 715  LVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDM 774

Query: 421  YAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            Y+K G +  + + FKE+  R NI+ WN++I   A+NG A   L  F+ M +S  +PD V+
Sbjct: 775  YSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVT 834

Query: 480  LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            LL VL ACSH GLI EGL +F+SM+Q Y + P+ +HYA ++D+L R G   +A++++ Q+
Sbjct: 835  LLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQL 894

Query: 540  PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            PF  D ++W++ + +C++HK+ E  K AA +L +ME  + ++ YV +S+++A AG W   
Sbjct: 895  PFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEP-QSSSTYVFLSSLHAAAGNWVEA 953

Query: 600  SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
               ++AMRE+GV K    SW+ + +K  VF   D  HP    I + +++L   M K+G
Sbjct: 954  KVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDG 1011



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 270/543 (49%), Gaps = 36/543 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  AR +F+ +     + WT +I GY +  ++++A  LF  M    GS P
Sbjct: 198 LVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK-MGSVP 256

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D VT                                   C +++ +   +  L  AR + 
Sbjct: 257 DQVT-----------------------------------CVTIISTLASMGRLGDARTLL 281

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K +    +V++NA+I  +++ GL+ E   L+ +M+  G  P+  TFA+ LSA   +    
Sbjct: 282 KRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFD 341

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GRQ+HA  VK     NVFV ++L++LY KH C+ +A+K+F    E + V +N ++  + 
Sbjct: 342 EGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFV 401

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            NE  +E++++F+ ++    +   F F ++L    N   L +GRQ+H  TI     +++ 
Sbjct: 402 QNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLF 461

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VAN+++DMY+K G  + AK +F+ +    +V W A+I          EA+N+   M    
Sbjct: 462 VANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYG 521

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ D+ +FA+ + A + + ++  GKQ+HS  I+    SN   GS+L+D+Y+K G ++ + 
Sbjct: 522 IALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSR 581

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           +    +   +IV  NALI+   QN      ++ F+ +++ G++P + +  S+LS C+   
Sbjct: 582 KVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPV 641

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
               G Q      +   L        S+V I  +    ++A KL+ ++P   + + W++ 
Sbjct: 642 SSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTAT 701

Query: 552 INS 554
           I+ 
Sbjct: 702 ISG 704



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 255/530 (48%), Gaps = 39/530 (7%)

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           +++    R+    F  +R   GS PD    A +LS CS         QVH D++K G+ S
Sbjct: 131 HARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS 190

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            +     LVD Y K   +D ARR+F  +   D++ + ++I G+ + G  ++A+ LF  M+
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
            +G  P   T    +S    LA  ++GR                              + 
Sbjct: 251 KMGSVPDQVTCVTIIST---LA--SMGR------------------------------LG 275

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           +AR L   +     V++N +I  Y+ +    E   L+++++      ++  F+++LS  A
Sbjct: 276 DARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAA 335

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           N      GRQIH   +     + V V +SL+++Y K G   +AK++F   +  + V W A
Sbjct: 336 NMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 395

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           ++  +VQ    EE + +F  M RA++ AD  TF S+L A   L SL LG+Q+H   I++G
Sbjct: 396 ILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG 455

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
             +++F  +A+LDMY+K G++  A   F  +P ++ VSWNALI   A N +    +   +
Sbjct: 456 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLK 515

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M   G   D VS  + ++ACS+   IE G Q  +S + KY +       +S++D+  + 
Sbjct: 516 RMKFYGIALDEVSFATAINACSNIWAIETGKQ-IHSASIKYNVCSNHAVGSSLIDLYSKF 574

Query: 527 GCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
           G  + + K++A +      P   + + ++ + R  + +E  ++     FK
Sbjct: 575 GDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFK 624



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/594 (25%), Positives = 275/594 (46%), Gaps = 71/594 (11%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK--EMPQKDSVSFNALITGFAKE 152
           +HA I++ G      + ++LVD Y +   +  A R           S + +++++  A+ 
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 153 GLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           G   + +  F  ++  +G  P  F  A  LSA   L  +  GRQVH  V+K+ F  +VF 
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
              L+D+Y+K   V +AR++F  +   D + +  MI  Y    +Y+++L LF  ++    
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME---- 250

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                           K+   +  Q+   TI++T               A  GR  +A+ 
Sbjct: 251 ----------------KMG-SVPDQVTCVTIIST--------------LASMGRLGDART 279

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +   +   STV W A+I++Y Q G   E   L+ +M +  +   ++TFASIL A+A + +
Sbjct: 280 LLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
              G+Q+H+  ++ G  +NVF GS+L+++Y K G + DA + F    E+NIV WNA++  
Sbjct: 340 FDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
             QN   + T++ F+ M ++  + D  + +SVL AC +   ++ G Q  + +T K  +  
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQ-VHCITIKNGMDA 458

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI----------NSCRIHKNL 561
                 +M+D+  + G  D A+ L + +P + D + W+++I           +  + K +
Sbjct: 459 DLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DSVSWNALIVGLAHNEEEGEAINMLKRM 517

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAV-AGQWESVSQVK------KAMRERGVRKV 614
           +F   A D+      +  A    A SNI+A+  G+    + +K       A+    +   
Sbjct: 518 KFYGIALDE------VSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLY 571

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIEN--------LMQEMKKEGYKP 660
           + +  VE   KV        + P    I   ++N        L Q++ K+G+KP
Sbjct: 572 SKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKP 625


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/751 (31%), Positives = 398/751 (52%), Gaps = 8/751 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +   S ++++S     G +  A E   ++    A    ++I G++       A   +
Sbjct: 37  LPPKRGSSKSLVVS-LAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAY 95

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG + PD  TF  ++  C+     +E    H  +IK G    +  CNSLV  Y K
Sbjct: 96  RGMLEDG-ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAA 179
           +  ++ A RVF  MP +D V++N ++ G+   GL   A+  F EM   L  +       A
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           AL+A         G+++H +V++    +++ V  +LLD+Y K   V  AR +F  MP   
Sbjct: 215 ALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V++N MI  YA NE+  E+   F +++             LL+  A       GR +H 
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHG 334

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +    +  V +  +L++MY K G+ E +++IF  +++ + V W  MI+AY+ K    E
Sbjct: 335 YVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTE 394

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ LF+E+    +  D  T ++++ A   L SL   +Q+HS++I  G+  N    +A+L 
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYA+SG +  + + F +M  ++++SWN +I   A +G  +  L+ F++M  +G QP+  +
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +SVL+ACS  GL++EG  +FN M Q+Y + P+ EHY  M D+L R G   E  + +  M
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P +P   +W S++ + R   +++ A+ AA+++F++E   +   Y+ +S++YA AG+WE V
Sbjct: 575 PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEH-DNTGCYIVLSSMYADAGRWEDV 633

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            +V+  M+E+G+R+    S VEL S    F   D  H Q+  I  ++ N++    +E   
Sbjct: 634 ERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTI-HEVSNILSRKIEE--T 690

Query: 660 PDTSCALHDEDEEIKVESL-KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            DT    +      +  ++   HS RLA+ F LI++  GSPILV KN+R C  CH A+KL
Sbjct: 691 DDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKL 750

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IS+ +GR I V DS  +H F DG C C D+W
Sbjct: 751 ISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/613 (35%), Positives = 348/613 (56%), Gaps = 5/613 (0%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S  +N  +   AK     +A+ L+ +M   G +P+ FTF  AL +   L+   LG Q H 
Sbjct: 5   STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE--MPEVDGVSYNVMITCYAWNEQY 256
            + K   V   FV   L+ +Y K   V  ARK+F E        V YN +++ Y  N + 
Sbjct: 65  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
            +++ LFR++       +      L+    + ++L++G  +H  T+     S+V V N  
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCF 184

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
           + MY KCG    A+++F  +     + W AM+S Y Q G     L L+  M    +  D 
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDP 244

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T   +L + A L + S+G ++   +  SGF SN F  +AL++MYA+ G+L  A   F  
Sbjct: 245 VTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDG 304

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           MPER +VSW A+I     +G  +  ++ F++M++SG +PD  + + VLSACSH GL ++G
Sbjct: 305 MPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQG 364

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           L+YF  M + Y+L P  EHY+ MVD+L R+G   EA+ L+  MP +PD  +W +++ +C+
Sbjct: 365 LEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACK 424

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IHKN+E A+ A +++ ++E   +   YV +SNIY+ A   + V +++  M+E+ ++K   
Sbjct: 425 IHKNVELAELAFERVIELEP-ENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 483

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            S+VELK +VH F   D  H Q++EI R +E L   + +E  KP+      +E  +    
Sbjct: 484 CSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFT 541

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            +  HSE+LA+AF L+NT  G+ ++++KNLR C DCH   K++SKI  R++TVRD++RFH
Sbjct: 542 RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFH 601

Query: 737 HFKDGFCSCRDFW 749
           HF++G CSC+D+W
Sbjct: 602 HFRNGSCSCKDYW 614



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 225/493 (45%), Gaps = 9/493 (1%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           +  W   +   +++ QF +A  L+  M   G   P+  TF   L  C+         Q H
Sbjct: 5   STPWNTQLRELAKRCQFLQALSLYPQMLRHG-DRPNAFTFPFALKSCAALSLPILGSQFH 63

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE--MPQKDSVSFNALITGFAKEGL 154
             I K G      +   L+  YCK   +D AR+VF+E    +K +V +NAL++G+     
Sbjct: 64  GQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSK 123

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             +A+ LF +M   G   +  T    + A V   ++ LG  +H   +K  F  +V V N 
Sbjct: 124 CSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNC 183

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
            + +Y K   V  A+KLF EMP    +S+N M++ YA N      L+L+R +        
Sbjct: 184 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPD 243

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
                 +LS  AN     +G ++  +   +   S   + N+L++MYA+CG   +A+ +F 
Sbjct: 244 PVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 303

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   + V WTA+I  Y   G+ E A+ LF EM R+ I  D   F  +L A +       
Sbjct: 304 GMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQ 363

Query: 395 GKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G +    + R+          S ++D+  ++G LK+A    + MP + +   W AL+ AC
Sbjct: 364 GLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 423

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             + + +    +FE +++   +P+++    +LS         +G+     M ++ KL  K
Sbjct: 424 KIHKNVELAELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL--K 479

Query: 513 KEHYASMVDILCR 525
           K+   S V++  R
Sbjct: 480 KDPGCSYVELKGR 492



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 9/244 (3%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N  I+ Y+K G++  A++LF+ M  +  +SW  ++ GY+Q        +L+ +M  + G
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMN-G 239

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD VT   +LS C+     +   +V   +   G+ S   + N+L++ Y +   L  A+
Sbjct: 240 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQ 299

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVG 186
            VF  MP++  VS+ A+I G+   G  E A++LF EM   G +P    F   LSA    G
Sbjct: 300 AVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359

Query: 187 LADIALGRQVHAFVVKTNFVENVFVAN--ALLDLYSKHDCVVEARKLFGEMP-EVDGVSY 243
           L D  L    +  ++K N+       +   ++DL  +   + EA+ L   MP + DG  +
Sbjct: 360 LTDQGL---EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416

Query: 244 NVMI 247
             ++
Sbjct: 417 GALL 420



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI+ Y + GNL  A+ +F+ M +RT VSWT +IGGY        A +LF +M 
Sbjct: 278 NPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM- 336

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
              G +PD   F  +LS CS     ++ ++
Sbjct: 337 IRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/657 (34%), Positives = 369/657 (56%), Gaps = 2/657 (0%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q++A I+    +  L+    +  +Y ++  L +A + F  +  ++  S+N ++   +K  
Sbjct: 33  QLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNK 92

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
              + ++LF  M   G     F    A+ A  GL+     +  H+  +K     + +VA 
Sbjct: 93  CFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAP 152

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+++Y++   + EA K+F E+P  + V + VMI  +    +     +LF  ++ + F+ 
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEI 332
             F    L+    N    + G+  H   I    I S   +  SLVDMY KCG  + A ++
Sbjct: 213 DPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKL 272

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +S+   V W+A+I+ + + G   E++++F +M   +++ +  TFASI+ A + L SL
Sbjct: 273 FEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSL 332

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
             G+ +H ++IR+G   +V + ++ +DMYAK G +  A + F ++PE+N+ SW+ +I+  
Sbjct: 333 KQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGF 392

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             +G     L  F +M      P+SV+ +SVLSACSH G IEEG  +F SM++ Y + P 
Sbjct: 393 GMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV 452

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           +EHYA MVD+L R+G  DEA   +  MP EP    W +++ +CRIH+  E A++ A +L 
Sbjct: 453 EEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
            +E    +  YV +SNIYA  G WE V + +  M E+G+ K+  ++ +E++ K+++F++ 
Sbjct: 513 PLES-DQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSE 571

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           D    +  +I     +L + M++ GY PD    LHD D+E+K E L  HSE+LAI F L+
Sbjct: 572 DRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLL 631

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           N+ EG PI + KN+R C DCH A K IS IT R+I +RD  RFHH +DG CSC D+W
Sbjct: 632 NSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 205/446 (45%), Gaps = 6/446 (1%)

Query: 11  MLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG-S 69
           M+   Y++ G+L  A + FN +      SW  ++  +S+   F +  +LF  M  +G   
Sbjct: 52  MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV 111

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D   + FA  +  C            H+  IK        +  +L++ Y ++  L+ A +
Sbjct: 112 DSFNLVFA--VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHK 169

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF+E+P K+SV +  +I G           +LF  M+  GF+   F     + A   +  
Sbjct: 170 VFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYA 229

Query: 190 IALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
              G+  H   +K NF++ N F+  +L+D+Y K   +  A KLF E+   D V ++ +I 
Sbjct: 230 GKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIA 289

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A N +  ES+ +FR++       +   F++++   ++   L+ GR +H   I      
Sbjct: 290 GFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVEL 349

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +VK   S +DMYAKCG    A  +F  +   +   W+ MI+ +   G   EALNLF EM 
Sbjct: 350 DVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMR 409

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSL 427
             N   +  TF S+L A +    +  G      + R   ++ V    A ++D+  ++G +
Sbjct: 410 SVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKI 469

Query: 428 KDAIQTFKEMP-ERNIVSWNALISAC 452
            +A+     MP E    +W AL+ AC
Sbjct: 470 DEALSFINNMPTEPGASAWGALLGAC 495



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 1/279 (0%)

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
           S+ P  TLLS+      L    Q++ Q +V      +     +   Y + G    A + F
Sbjct: 11  SRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAF 70

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
            +++  +   W  +++++ +     + L LF  M +     D       ++A   L+   
Sbjct: 71  NHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQ 130

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
             K  HS  I+     + +   AL+++Y + GSL++A + F+E+P +N V W  +I    
Sbjct: 131 GAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHL 190

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
              +     + F  M +SG++ D   +  ++ AC +    +EG  +     +K  +    
Sbjct: 191 NFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNF 250

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               S+VD+  + G  D A KL  ++ +  D ++WS++I
Sbjct: 251 FLQTSLVDMYMKCGFLDFALKLFEEISYR-DVVVWSAII 288


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/563 (38%), Positives = 330/563 (58%), Gaps = 7/563 (1%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDGVSYNVM 246
           + +G+  H   +    V +    N L++LY+K   +DC   AR +F  M     VS+N M
Sbjct: 73  LLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDC---ARLVFDIMHVRSIVSWNTM 129

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  Y  + +  ++LKLF  +       S+F  S+ +   A K  +   +Q+HT  +    
Sbjct: 130 IAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLAL 189

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S   V  +++D+YAKC   ++A  +F  +   + V W+++ + YVQ G  EEAL+LF  
Sbjct: 190 DSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRC 249

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
             R  +   + T ++IL A A LA    G QLH+ +++ GF  N F  ++L+D+YA+ G 
Sbjct: 250 AQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQ 309

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           ++ A   F  M  +N+V WNA+I++ +++  +   +  FE M Q G  P+ V+ LSVLS 
Sbjct: 310 IEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSV 369

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL+E+G  YF+ +     + P   HY+ MVD+L RSG  DEA +L+ +MPFEP   
Sbjct: 370 CSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTAS 429

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           MW S++ SCR + N+  A+ AA+QLF++E   +   +V +SN+YA +G WE+V   +K +
Sbjct: 430 MWGSLLGSCRNYNNIRLARIAAEQLFQLEP-DNGGNHVLLSNVYAASGNWENVLMARKYL 488

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           ++ G +K    SW+E K KVHVF   +  HP+  +I  K+E +  EM+K   +    C L
Sbjct: 489 KDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDL 548

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
           HD   E K E LK+HSE+LA++F LI+ P   PI++ KNLR C DCH+ +K+ + IT R 
Sbjct: 549 HDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERL 608

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           + VRD++RFHHFKDG CSC DFW
Sbjct: 609 VIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 6/385 (1%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
           H   I FG  +  + CN L++ Y K    D AR VF  M  +  VS+N +I G+   G +
Sbjct: 80  HGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGED 139

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
            +A+KLF  M   G   S+FT ++ + A      I   +Q+H   +K     N FV  A+
Sbjct: 140 VQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAI 199

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           LD+Y+K + + +A  +F +MPE   V+++ +   Y  N  ++E+L LFR  Q    + ++
Sbjct: 200 LDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTE 259

Query: 276 FPFSTLLSVVANKLDLQI-GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           F  S +LS  A+ L L+I G Q+H   +         VA SLVD+YA+CG+ E+A  +FA
Sbjct: 260 FTLSAILSACAS-LALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFA 318

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            + H + V W AMI+++ +  +  EA+ LF +M +  I  ++ T+ S+L   +    +  
Sbjct: 319 YMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEK 378

Query: 395 GKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G+   S ++    +  NV   S ++D+  +SG   +A +   +MP E     W +L+ +C
Sbjct: 379 GRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSC 438

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDS 477
               + +    + E + Q   +PD+
Sbjct: 439 RNYNNIRLARIAAEQLFQ--LEPDN 461



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 188/358 (52%), Gaps = 3/358 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T++ N+LI+ Y K G    AR +F+ M  R+ VSW  +I GY+   +  +A KLF  M 
Sbjct: 91  DTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G    ++ T ++ +  C+     NE  Q+H   +K   +S   +  +++D Y K   +
Sbjct: 151 REGTHMSEF-TLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMI 209

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A  VF++MP++  V++++L  G+ + GL+EEA+ LF   Q  G + ++FT +A LSA 
Sbjct: 210 KDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSAC 269

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA    G Q+HA ++K  F  N FVA +L+D+Y++   + +A  LF  M   + V +N
Sbjct: 270 ASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWN 329

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  ++ +    E++ LF ++Q      ++  + ++LSV ++   ++ GR   +  +  
Sbjct: 330 AMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSD 389

Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             +   V   + +VD+  + G+ +EA E+   +    T   W +++ +     N+  A
Sbjct: 390 RTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLA 447



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 170/335 (50%), Gaps = 5/335 (1%)

Query: 263 FRELQFTRFDRSQFPFSTL---LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDM 319
            ++ +  R DR+    S +   L + A +  L +G+  H   I    +++    N L+++
Sbjct: 42  LKDRRLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINL 101

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y KCGR + A+ +F  +   S V W  MI+ Y   G   +AL LF  M R      + T 
Sbjct: 102 YTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTL 161

Query: 380 ASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           +S + A A   +++  KQLH+  ++    SN F G+A+LD+YAK   +KDA   F++MPE
Sbjct: 162 SSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPE 221

Query: 440 RNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           R +V+W++L +   QNG  +  L  F    + G +    +L ++LSAC+   L  EG+Q 
Sbjct: 222 RTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQ- 280

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            +++  K          AS+VD+  R G  ++A  L A M    + ++W+++I S   H 
Sbjct: 281 LHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYME-HKNVVIWNAMIASFSRHA 339

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           +   A    +++ ++    +   Y+++ ++ + AG
Sbjct: 340 HSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAG 374



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 2/235 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N+     ++  Y K   +  A  +F  M +RT V+W+ L  GY Q     EA  LF  
Sbjct: 190 DSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRC 249

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
            + +G    ++ T + +LS C+      E IQ+HA I+K G++    +  SLVD Y +  
Sbjct: 250 AQREGVELTEF-TLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCG 308

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A  +F  M  K+ V +NA+I  F++   + EA+ LF +MQ LG  P++ T+ + LS
Sbjct: 309 QIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLS 368

Query: 183 AGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
                  +  GR   + ++    VE NV   + ++D+  +     EA +L  +MP
Sbjct: 369 VCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMP 423


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 337/594 (56%), Gaps = 34/594 (5%)

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +   + +HA +VK   V+   +AN L+++Y K      A ++F EMP  D +++  ++T 
Sbjct: 19  LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                   ++L +F  +  +   R   F FS L+   AN   +  GRQ+H   IV+   +
Sbjct: 79  LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF---- 364
           +  V +SLVDMYAKCG    AK +F ++   +T+ WTAM+S Y + G  EEAL LF    
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198

Query: 365 ---------------------------IEMCRANISA-DQATFASILRASAELASLSLGK 396
                                       EM R  +   D    +SI+ A A LA+   G+
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
           Q+H  VI  GF S VF  +AL+DMYAK   +  A   F  M  R++VSW +LI   AQ+G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            A+  L  ++DMV  G +P+ V+ + ++ ACSH G +E+G + F SMT+ Y +RP  +HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
             ++D+L RSG  DEAE L+  MPF PDE  W++++++C+     +   + AD L    K
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
           L+D + Y+ +SNIYA A  W  VS+ ++ + E  VRK   +S VE++ +  VF A +  H
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498

Query: 637 PQTNEIRRKIENLMQEMK-KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           P   +I R ++ L +EM+ + GY PDTS  LHD DE+ K + L +HSER A+A+ L+   
Sbjct: 499 PLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAV 558

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            G+PI ++KNLR C DCH  +K IS+IT REI VRD++R+HHFK G CSC DFW
Sbjct: 559 PGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 38/459 (8%)

Query: 83  CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
           C+   T      +HA I+K G      + N+LV+ Y K      A +VF EMP +D +++
Sbjct: 13  CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
            +++T   +  L+ + + +F  +      +P DF F+A + A   L  I  GRQVH   +
Sbjct: 73  ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
            + +  +  V ++L+D+Y+K   +  A+ +F  +   + +S+  M++ YA + + +E+L+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192

Query: 262 LFRELQ--------------------------FTRFDRSQ------FPFSTLLSVVANKL 289
           LFR L                           FT   R +         S+++   AN  
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
               GRQ+H   I     S V ++N+L+DMYAKC     AK+IF+ + H   V WT++I 
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFM 408
              Q G  E+AL L+ +M    +  ++ TF  ++ A + +  +  G++L  S     G  
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
            ++   + LLD+  +SG L +A      MP   +  +W AL+SAC + G  Q  ++  + 
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432

Query: 468 MVQSG--YQPDSVSLLS-VLSACSHCGLIEEGLQYFNSM 503
           +V S     P +  LLS + ++ S  G + E  +    M
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 197/416 (47%), Gaps = 36/416 (8%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K G  + A ++F+ M  R  ++W  ++   +Q N   +   +F  + +  G 
Sbjct: 42  NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD   F+ L+  C+   + +   QVH   I   Y +  ++ +SLVD Y K   L+ A+ 
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF--VEMQHL--------GFKPS------ 173
           VF  +  K+++S+ A+++G+AK G  EEA++LF  + +++L        GF  S      
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221

Query: 174 ------------DFTFAAALSAGVG----LADIALGRQVHAFVVKTNFVENVFVANALLD 217
                       D      LS+ VG    LA    GRQVH  V+   F   VF++NAL+D
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y+K   V+ A+ +F  M   D VS+  +I   A + Q +++L L+ ++       ++  
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F  L+   ++   ++ GR++         I   ++    L+D+  + G  +EA+ +   +
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401

Query: 337 SHISTVP-WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA--SILRASAEL 389
                 P W A++SA  ++G  +  + +   +  +    D +T+   S + ASA L
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 1/234 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +NT+S   ++SGY KSG    A ELF  +  +   SWT LI G+ Q  +  EAF +F +M
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R +     D +  ++++  C+    +    QVH  +I  G++S + I N+L+D Y K   
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A+ +F  M  +D VS+ +LI G A+ G  E+A+ L+ +M   G KP++ TF   + A
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
              +  +  GR++   + K   +         LLDL  +   + EA  L   MP
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
           L + A    L   + +H   +    +    +AN+LV++Y KCG    A ++F  + H   
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 342 VPWTAMISAYVQKGNL--EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
           + W ++++A + + NL  +           + +  D   F+++++A A L S+  G+Q+H
Sbjct: 70  IAWASVLTA-LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
              I S + ++    S+L+DMYAK G L  A   F  +  +N +SW A++S  A++G  +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188

Query: 460 ATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             L+ F  + V++ Y     S  +++S     G   +GL+ F+  T+  + R
Sbjct: 189 EALELFRILPVKNLY-----SWTALISGFVQSG---KGLEAFSVFTEMRRER 232



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 117/234 (50%), Gaps = 18/234 (7%)

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L+  A   +L+  K LH+ +++ G +      + L+++Y K G+   A+Q F EMP R+ 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 443 VSWNALISACAQNGDAQATL-KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-YF 500
           ++W ++++A  Q   +  TL         SG +PD     +++ AC++ G I+ G Q + 
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
           + +  +Y     +   +S+VD+  + G  + A+ +   +  + + I W+++++       
Sbjct: 130 HFIVSEYA--NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG------ 180

Query: 561 LEFAKKA----ADQLFKMEKLRDAAPYVAMSNIYAVAGQ-WESVSQVKKAMRER 609
             +AK      A +LF++  +++   + A+ + +  +G+  E+ S   +  RER
Sbjct: 181 --YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232


>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
 gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
          Length = 620

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/621 (35%), Positives = 342/621 (55%), Gaps = 37/621 (5%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK--- 221
           MQ  G +P    F  AL A     ++  GRQ+H+ VV +    N+ ++N+L+++Y K   
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 222 ----------------------------HDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
                                       + C  +A  +F  MP  D VS+N +I     N
Sbjct: 61  VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKV 312
            +++++L+LF  ++      ++F   +LL       DL++ RQIH +        +   V
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK--GNLEEALNLFIEMCRA 370
            NS+V+MYA+CG   + K+ F +L     V W+ M++AY Q   G+   A   F EM   
Sbjct: 181 GNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAE 240

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFM-SNVFSGSALLDMYAKSGSLKD 429
            I   + TF S L A A +A+L  G+ +H     SGF+ +++  G+ +++MY K GS  D
Sbjct: 241 GIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSD 300

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F +MPE+ ++SWN+LI A A NG A   L S ++M+  G+ PDS + +S+L   SH
Sbjct: 301 AKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSH 360

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP-FEPDEIMW 548
            GL+E G+++F S  Q + L P       +VD+L R G  D AE+L+   P  + D I W
Sbjct: 361 AGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAW 420

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +C+ + + +   + A+++F++E  + +  +V ++N+YA  G+W   S+++K M  
Sbjct: 421 MTLLAACKSYGDPQRGIRCAERVFELEP-QHSGSFVVLANLYASVGRWSDASRIRKMMER 479

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
             V+K    SW+EL   VH F + +  HP+  EI  ++E L   M++ GY PDT+  +HD
Sbjct: 480 MSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHD 539

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            +E  K E L  HSERLAI F L++T  G  I V+KNLR C+DCHAA K+IS + GREI 
Sbjct: 540 VEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIV 599

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           VRDSSRFHHFK G CSC DFW
Sbjct: 600 VRDSSRFHHFKHGQCSCGDFW 620



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 201/437 (45%), Gaps = 38/437 (8%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR----- 122
           G+ PD V F   L  C+     +   Q+H+ ++  G  S +II NSLV+ Y K +     
Sbjct: 5   GTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCA 64

Query: 123 --------------------------CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
                                     C   A  VF+ MP+KD VS+NA+I         +
Sbjct: 65  EKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQ 124

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANAL 215
           +A++LF  M+  G + ++FT  + L A  GL D+ L RQ+HA      F  N   V N++
Sbjct: 125 DALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSV 184

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ--YKESLKLFRELQFTRFDR 273
           +++Y++   +++ +K F  + E   V++++M+  YA ++    + + K F+E++      
Sbjct: 185 VNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKP 244

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEI 332
            +  F + L   A    L+ GR +H +   +  + + + + N++++MY KCG   +AK +
Sbjct: 245 GEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLV 304

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  +     + W ++I AY   G+  EAL+   EM       D  T  SIL   +    L
Sbjct: 305 FDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLL 364

Query: 393 SLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALI 449
             G +   S +   G   +      L+D+ A+ G L  A +     P  + + ++W  L+
Sbjct: 365 ERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLL 424

Query: 450 SACAQNGDAQATLKSFE 466
           +AC   GD Q  ++  E
Sbjct: 425 AACKSYGDPQRGIRCAE 441



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ VS   +++ Y ++G  + A  +F +M  +  VSW  +I      ++F++A +LF  M
Sbjct: 74  RDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGM 133

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVH--ADIIKFGYNSILIICNSLVDSYCKI 121
             +G    ++ T  +LL  C   +      Q+H  A    FG NS   + NS+V+ Y + 
Sbjct: 134 ELEGLRSNEF-TLLSLLEACGGLEDLKLARQIHARAAAGGFGGNST-AVGNSVVNMYARC 191

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFA--KEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
             L   ++ F  + +K  V+++ ++  +A  K+G    A K F EM+  G KP + TF +
Sbjct: 192 GSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVS 251

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFV-ANALLDLYSKHDCVVEARKLFGEMPEV 238
           AL A   +A +  GR +H     + FVE   V  N ++++Y K     +A+ +F +MPE 
Sbjct: 252 ALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEK 311

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
             +S+N +I  YA N    E+L   +E+    FD       ++L  +++   L+ G +  
Sbjct: 312 CLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHF 371

Query: 299 TQTIVTTAISEVKVA-NSLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKG 355
             +I    +         LVD+ A+ G  + A+E+   +      T+ W  +++A    G
Sbjct: 372 RSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYG 431

Query: 356 NLEEAL 361
           + +  +
Sbjct: 432 DPQRGI 437


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/618 (35%), Positives = 346/618 (55%), Gaps = 31/618 (5%)

Query: 158 AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           A+  +  M+ L  +   F   + L A   ++   +G+++H F VK   V +VFV NAL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY-------------AWN---------EQ 255
           +YS+   +V AR LF +M E D VS++ MI  Y             +W            
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 256 YKESLKLFRELQFTRFDRSQFPFS-TLLSVVAN---KLDLQIGRQIHTQTIVTTAISEVK 311
            +E  +LF  +     + + FP   T+LS++ +      +Q+G+++H   +       + 
Sbjct: 213 LEEGERLFVRM----IEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           +A +LVDMY KCG    A+ IF ++ +   + WTAMISAY Q   ++ A  LF++M    
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNG 328

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  ++ T  S+L   A   +L +GK  H+++ + G   +V   +AL+DMYAK G +  A 
Sbjct: 329 VRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQ 388

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F E  +R+I +WN +++    +G  +  LK F +M   G +P+ ++ +  L ACSH G
Sbjct: 389 RLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAG 448

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+ EG   F  M   + L PK EHY  MVD+L R+G  DEA K++  MP  P+  +W ++
Sbjct: 449 LVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAM 508

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C+IHKN    + AA +L  +E  ++    V MSNIYA A +W  V+ ++KA+++ G+
Sbjct: 509 LAACKIHKNSNMGELAARELLALEP-QNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGI 567

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K    S +E+   VH F   D  HP   +I   +  + +++K+ GY PDTS  LH+ DE
Sbjct: 568 KKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDE 627

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K  +L YHSE+LA+AF LI+T  G+PI V+KNLR C DCH   KL+SKI  R I VRD
Sbjct: 628 EEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRD 687

Query: 732 SSRFHHFKDGFCSCRDFW 749
            +RFHHF++G CSC  +W
Sbjct: 688 RNRFHHFREGSCSCGGYW 705



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 188/405 (46%), Gaps = 24/405 (5%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D     ++L  CS+   A    ++H   +K G  S + + N+L+  Y +   L  AR +F
Sbjct: 108 DSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLF 167

Query: 132 KEMPQKDSVSFN----------------------ALITGFAKEGLNEEAIKLFVEMQHLG 169
            +M ++D VS++                      A+I G+ +    EE  +LFV M    
Sbjct: 168 DKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEEN 227

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
             P+D T  + + +   +  + LG+++HA++++  F  ++ +A AL+D+Y K   +  AR
Sbjct: 228 VFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSAR 287

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
            +F  M   D +++  MI+ YA       + +LF +++      ++    +LLS+ A   
Sbjct: 288 AIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNG 347

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            L +G+  H          +V +  +L+DMYAKCG    A+ +F+         W  M++
Sbjct: 348 ALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMA 407

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFM 408
            Y   G  E+AL LF EM    +  +  TF   L A +    +  GK L   +I   G +
Sbjct: 408 GYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLV 467

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
             V     ++D+  ++G L +A +  + MP   NI  W A+++AC
Sbjct: 468 PKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 227/506 (44%), Gaps = 63/506 (12%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVS----------------------WTILIGG 46
            N L+  Y + G+L +AR LF+ M +R  VS                      WT +I G
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206

Query: 47  YSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS 106
           Y + N   E  +LFV M  +    P+ +T  +L+  C          ++HA I++ G+  
Sbjct: 207 YIRCNDLEEGERLFVRM-IEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM 265

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            L +  +LVD Y K   +  AR +F  M  KD +++ A+I+ +A+    + A +LFV+M+
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMR 325

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G +P++ T  + LS       + +G+  HA++ K     +V +  AL+D+Y+K   + 
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A++LF E  + D  ++NVM+  Y  +   +++LKLF E++      +   F   L   +
Sbjct: 386 GAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS 445

Query: 287 NKLDLQIGRQIHTQTIVTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-W 344
           +   +  G+ +  + I     + +V+    +VD+  + G  +EA ++  ++     +  W
Sbjct: 446 HAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIW 505

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            AM++A                 C+ + +++    A+  R    L   + G ++      
Sbjct: 506 GAMLAA-----------------CKIHKNSNMGELAA--RELLALEPQNCGYKV------ 540

Query: 405 SGFMSNVFSGSALL-DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
              MSN+++ +    D+     ++KD     K+ P  + +  N L+        A   ++
Sbjct: 541 --LMSNIYAAANRWNDVAGMRKAVKDT--GIKKEPGMSSIEVNGLVHDFKMGDTAHPLIE 596

Query: 464 SFEDMV--------QSGYQPDSVSLL 481
              +M+        ++GY PD+  +L
Sbjct: 597 KISEMLAEMSKKLKEAGYLPDTSVVL 622


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/560 (39%), Positives = 336/560 (60%), Gaps = 4/560 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCYA 251
           GRQ+HA ++ +    +  +A  L+DLY+    V  AR+LF EMP    V  +NV+I  YA
Sbjct: 82  GRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141

Query: 252 WNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
            +   + +++L+RE L     +   F +  +L   A  LDL  GR++H + + T+  ++V
Sbjct: 142 RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADV 201

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V   L+DMYAKCG  +EA  +F + +    V W +MI+A  Q G   EAL L   M   
Sbjct: 202 FVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAE 261

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I+    T  S + A+A+  +L  G++LH +  R GF S     ++LLDMYAKSG +  A
Sbjct: 262 GIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVA 321

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSH 489
              F ++  R ++SWNA+I     +G A    + F  M  ++   PD ++ + VLSAC+H
Sbjct: 322 RVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNH 381

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            G+++E  + F+ M   Y ++P  +HY  +VD+L  SG F EA  ++  M  +PD  +W 
Sbjct: 382 GGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWG 441

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++N C+IHKN+E A+ A  +L ++E   DA  YV +SNIYA +G+WE  ++V+K M  R
Sbjct: 442 ALLNGCKIHKNVELAELALHKLIELEP-EDAGNYVLLSNIYAQSGKWEEAARVRKLMTNR 500

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++K+ A SW+ELK K H F   D  HP+++EI  ++E L   + + GY PDT+   H+ 
Sbjct: 501 GLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNV 560

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +++ K   ++ HSERLAIAF LI+TP G+ +LV KNLR C DCH  IKLIS+I  REI +
Sbjct: 561 EDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIII 620

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD +R+HHF +G CSC+D W
Sbjct: 621 RDVNRYHHFVNGECSCKDHW 640



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 185/388 (47%), Gaps = 9/388 (2%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++  +AT+L  C          Q+HA ++  G     ++   LVD Y     + +ARR+F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 132 KEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLAD 189
            EMP + +V  +N LI  +A++G  E AI+L+ EM   G  +P +FT+   L A   L D
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR+VH  V++T++  +VFV   L+D+Y+K  CV EA  +F      D V +N MI  
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              N +  E+L L R +       +     + +S  A+   L  GR++H         S+
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-C 368
            K+  SL+DMYAK G    A+ +F  L H   + W AMI  +   G+ + A  LF  M  
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSL 427
            A +  D  TF  +L A      +   K++   ++        V   + L+D+   SG  
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421

Query: 428 KDAIQTFKEM---PERNIVSWNALISAC 452
           K+A    K M   P+  I  W AL++ C
Sbjct: 422 KEASDVIKGMLVKPDSGI--WGALLNGC 447



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 215/500 (43%), Gaps = 62/500 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDM 63
           + V    L+  Y   G ++ AR LF+ M ++  V  W +LI  Y++      A +L+ +M
Sbjct: 97  DAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREM 156

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G  +PD  T+  +L  C+         +VH  +++  + + + +C  L+D Y K  C
Sbjct: 157 LACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGC 216

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A  VF     +D+V +N++I    + G   EA+ L   M   G  P+  T  +A+SA
Sbjct: 217 VDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISA 276

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  GR++H +  +  F     +  +LLD+Y+K   V  AR LF ++   + +S+
Sbjct: 277 AADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISW 336

Query: 244 NVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N MI  +  +     + +LFR ++   +       F  +LS   +   +Q  +++    +
Sbjct: 337 NAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMV 396

Query: 303 VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFAN-LSHISTVPWTAMISAYVQKGNLEEA 360
              +I   V+    LVD+    GRF+EA ++    L    +  W A+++           
Sbjct: 397 TVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNG---------- 446

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG---FMSNVFSGSAL 417
                  C+             +  + ELA L+L K +      +G    +SN+      
Sbjct: 447 -------CK-------------IHKNVELAELALHKLIELEPEDAGNYVLLSNI------ 480

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNI-----VSWNAL--ISACAQNGDAQAT--------L 462
              YA+SG  ++A +  K M  R +      SW  L   S     GDA           L
Sbjct: 481 ---YAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEEL 537

Query: 463 KSFEDMV-QSGYQPDSVSLL 481
           +  E ++ Q+GY PD+ S+ 
Sbjct: 538 ERLEGLISQTGYVPDTTSVF 557


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/658 (35%), Positives = 361/658 (54%), Gaps = 5/658 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V  N +++ Y K G+L  AR+ F++M  R+ VSWTI+I GYSQ  Q  +A  +++ M 
Sbjct: 114 DLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQML 173

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   PD +TF +++  C      +   Q+H  +IK GY+  LI  N+L+  Y K   +
Sbjct: 174 RSG-YFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQI 232

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSA 183
             A  VF  +  KD +S+ ++ITGF + G   EA+ LF +M   G ++P++F F +  SA
Sbjct: 233 AHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSA 292

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L     GRQ+     K     NVF   +L D+Y+K   +  A++ F ++   D VS+
Sbjct: 293 CRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSW 352

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I   A N    E++  F ++           F  LL    + + L  G QIH+  I 
Sbjct: 353 NAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIK 411

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALN 362
                   V NSL+ MY KC    +A  +F ++S + + V W A++SA  Q     EA  
Sbjct: 412 MGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFR 471

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF  M  +    D  T  +IL   AEL SL +G Q+H F ++SG + +V   + L+DMYA
Sbjct: 472 LFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYA 531

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G LK A   F      +IVSW++LI   AQ G  Q  L  F  M   G QP+ V+ L 
Sbjct: 532 KCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLG 591

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL+EEG   +N+M  +  + P +EH + MVD+L R+GC  EAE  + +  F+
Sbjct: 592 VLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFD 651

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD  MW +++ SC+ H N++ A++AA+ + K++   ++A  V +SNI+A AG W+ V+++
Sbjct: 652 PDITMWKTLLASCKTHGNVDIAERAAENILKLDP-SNSAALVLLSNIHASAGNWKEVARL 710

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +  M++ GV+KV   SW+E+K ++HVF + D  HPQ   I   +E+L  +M  +GY P
Sbjct: 711 RNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDP 768



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 247/486 (50%), Gaps = 6/486 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + ++ N LIS Y K G +A A ++F  +  +  +SW  +I G++Q     EA  LF D
Sbjct: 213 DHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRD 272

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M   G   P+   F ++ S C          Q+     KFG    +    SL D Y K  
Sbjct: 273 MFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFG 332

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  A+R F ++   D VS+NA+I   A   +N EAI  F +M H+G  P D TF   L 
Sbjct: 333 FLPSAKRAFYQIESPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLMPDDITFLNLLC 391

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-V 241
           A      +  G Q+H++++K    +   V N+LL +Y+K   + +A  +F ++ E    V
Sbjct: 392 ACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLV 451

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +++  + ++Q  E+ +LF+ + F+         +T+L   A  + L++G Q+H  +
Sbjct: 452 SWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFS 511

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           + +  + +V V+N L+DMYAKCG  + A+ +F +  +   V W+++I  Y Q G  +EAL
Sbjct: 512 VKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEAL 571

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFSGSALLDM 420
           NLF  M    +  ++ T+  +L A + +  +  G  L++ + I  G        S ++D+
Sbjct: 572 NLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDL 631

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
            A++G L +A    K+   + +I  W  L+++C  +G+     ++ E++++    P + +
Sbjct: 632 LARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILK--LDPSNSA 689

Query: 480 LLSVLS 485
            L +LS
Sbjct: 690 ALVLLS 695



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 247/506 (48%), Gaps = 5/506 (0%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           ++  +REA   F     +     +  T+  L+  C+   +     ++H  I+K      L
Sbjct: 56  KQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDL 115

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           ++ N +++ Y K   L  AR+ F  M  +  VS+  +I+G+++ G   +AI ++++M   
Sbjct: 116 VLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRS 175

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G+ P   TF + + A     DI LG Q+H  V+K+ +  ++   NAL+ +Y+K   +  A
Sbjct: 176 GYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHA 235

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVAN 287
             +F  +   D +S+  MIT +       E+L LFR++ +   +  ++F F ++ S   +
Sbjct: 236 SDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRS 295

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            L  + GRQI            V    SL DMYAK G    AK  F  +     V W A+
Sbjct: 296 LLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAI 355

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+A +   ++ EA+  F +M    +  D  TF ++L A     +L+ G Q+HS++I+ G 
Sbjct: 356 IAA-LANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGL 414

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFE 466
                  ++LL MY K  +L DA   FK++ E  N+VSWNA++SAC+Q+       + F+
Sbjct: 415 DKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFK 474

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M+ S  +PD++++ ++L  C+    +E G Q  +  + K  L         ++D+  + 
Sbjct: 475 LMLFSENKPDNITITTILGTCAELVSLEVGNQ-VHCFSVKSGLVVDVSVSNRLIDMYAKC 533

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G    A  +       PD + WSS+I
Sbjct: 534 GLLKHARYVFDSTQ-NPDIVSWSSLI 558



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 4/314 (1%)

Query: 241 VSYNVMITCYAWNEQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
           +S N  I      + Y+E+L  F   L+ +        +  L+    N   L+ G++IH 
Sbjct: 45  LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             + +    ++ + N +++MY KCG  ++A++ F  +   S V WT MIS Y Q G   +
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ ++I+M R+    DQ TF SI++A      + LG QLH  VI+SG+  ++ + +AL+ 
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALIS 224

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSV 478
           MY K G +  A   F  +  ++++SW ++I+   Q G     L  F DM + G YQP+  
Sbjct: 225 MYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEF 284

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
              SV SAC      E G Q    M  K+ L        S+ D+  + G    A++   Q
Sbjct: 285 IFGSVFSACRSLLKPEFGRQ-IQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQ 343

Query: 539 MPFEPDEIMWSSVI 552
           +   PD + W+++I
Sbjct: 344 IE-SPDLVSWNAII 356


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/612 (36%), Positives = 364/612 (59%), Gaps = 9/612 (1%)

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD--IALGRQVHAFVVKT 203
           +  F+  G + EA+  F  M   G +P   TF+  L+A   +    I  GR++H +   +
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             + NV V  A++ +Y K   + +AR  F E+   + V++N M+T Y  + + +E+L+LF
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 264 REL-QFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHT--QTIVTTAISEVKVANSLVDM 319
           RE+ + +R  R  +F FS  +   +N  DL+ GR+IH   +        +V V  +L++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 320 YAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEALNLFIEMC-RANISADQA 377
           Y+KCG  EEA+++F ++ H   +V W AMI+AY Q G  ++AL+L+  M    +++  Q 
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TF +++   AEL++L  G+ +H+ V  + F +N+   +AL+ MY K G L +A+  F  M
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             ++ +SWN +IS+ A +G +   L  +++M   G +P  V+ + +LSACSH GL+ +GL
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YF  M   ++++P   H+  ++D+L R G   EAE ++  MP + + + W S++ +C+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           H +L+   +AADQ+        +  YV +SNIYA AG+W+ V +++K M  RGV+K    
Sbjct: 421 HGDLKRGVRAADQVVDRVPW-TSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGK 479

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW+E+   VH F + D  HPQ  EI  ++  +++EMK  GY PDTS   HD +EE K + 
Sbjct: 480 SWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDL 539

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           L  HSE+LAI +  +  P  S + ++KNLR C DCH A K +S+ITGR+I VRD++RFH 
Sbjct: 540 LVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHL 599

Query: 738 FKDGFCSCRDFW 749
           F++G CSCRD+W
Sbjct: 600 FENGSCSCRDYW 611



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 223/436 (51%), Gaps = 11/436 (2%)

Query: 44  IGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTA--NELIQVHADIIK 101
           +  +S      EA   F  M    G  PD VTF+ +L+  ++   A  ++  ++H     
Sbjct: 1   MAAFSHNGCHSEALVFFRRM-YQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARI 59

Query: 102 FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKL 161
            G    +++  +++  Y K   LD AR  F+E+  K+SV++NA++T +  +G + EA++L
Sbjct: 60  SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALEL 119

Query: 162 FVEM--QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN--FVENVFVANALLD 217
           F EM  +    +P  F+F+ A+ A   L D+  GR++H  + +      ++V V  ALL+
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179

Query: 218 LYSKHDCVVEARKLFGEM-PEVDGVSYNVMITCYAWNEQYKESLKLFRELQ-FTRFDRSQ 275
           +YSK   + EARK+F  +  + D V +N MI  YA + + K++L L+R +   T     Q
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             F T++ V A    L+ GR IH +   T   + + V+N+LV MY KCG  +EA ++F +
Sbjct: 240 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +     + W  +IS+Y   G+ ++AL L+ EM    +   + TF  +L A +    ++ G
Sbjct: 300 MKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG 359

Query: 396 -KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA 453
               +          +V     ++D+  + G L +A    K MP + N V W +L+ AC 
Sbjct: 360 LDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACK 419

Query: 454 QNGDAQATLKSFEDMV 469
            +GD +  +++ + +V
Sbjct: 420 THGDLKRGVRAADQVV 435



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 180/373 (48%), Gaps = 25/373 (6%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM- 63
           N V    +IS Y K G L  AR  F  +  + +V+W  ++  Y    + REA +LF +M 
Sbjct: 65  NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMC 124

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG--YNSILIICNSLVDSYCKI 121
                + PD  +F+  +  CS  +   +  ++H  + + G   +  +++  +L++ Y K 
Sbjct: 125 ERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKC 184

Query: 122 RCLDLARRVFKEMPQK-DSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAA 179
             L+ AR+VF  +    DSV +NA+I  +A+ G  ++A+ L+  M       P   TF  
Sbjct: 185 GDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVT 244

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            +     L+ +  GR +HA V  TNF  N+ V+NAL+ +Y K  C+ EA  +F  M   D
Sbjct: 245 VIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKD 304

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS------VVANKLD--- 290
            +S+N +I+ YA++    ++L L++E+       ++  F  LLS      +VA+ LD   
Sbjct: 305 EISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFY 364

Query: 291 -LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMI 348
            +Q   +I            V     ++D+  + GR  EA+ +  ++    + V W +++
Sbjct: 365 RMQDDHRIKPS---------VPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLL 415

Query: 349 SAYVQKGNLEEAL 361
            A    G+L+  +
Sbjct: 416 GACKTHGDLKRGV 428



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 1/182 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMV-DRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +++ V    L++ Y K G+L  AR++F+S+  D  +V W  +I  Y+Q  + ++A  L+ 
Sbjct: 168 HKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYR 227

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M       P   TF T++  C+E     +   +HA +    +++ L++ N+LV  Y K 
Sbjct: 228 SMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKC 287

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            CLD A  VF  M  KD +S+N +I+ +A  G +++A+ L+ EM   G KP++ TF   L
Sbjct: 288 GCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLL 347

Query: 182 SA 183
           SA
Sbjct: 348 SA 349


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/589 (37%), Positives = 340/589 (57%), Gaps = 34/589 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYA 251
           RQVHA ++KTN   ++     +  + +       A+++F   E  + +   +N  +   A
Sbjct: 45  RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             +   +++ LF  L+        F  S++L    N LDL  GR +H         S + 
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSH-------------------------ISTVP--- 343
           + N +V +YA CG   EA+ +F  +                            S +P   
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERN 224

Query: 344 ---WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
              WT+MI+ YVQ G  +EA++LF +M  A +  ++ T  ++L A A+L +L LG ++H 
Sbjct: 225 VRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHE 284

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           +  R GF  NV   + L+DMY K G L++A + F+EM ER +VSW+A+I   A +G A+ 
Sbjct: 285 YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEE 344

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L+ F DM Q G +P+ V+ + +L ACSH GLI EG ++F SMT+ Y + P+ EHY  MV
Sbjct: 345 ALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMV 404

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L R+G   EA + +  MP +P+ ++W +++ +CR+HKN+E A++A   L +++ L D 
Sbjct: 405 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDG 464

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
             YV +SNIYA AG+WE  ++V+K M++R V+K   +S + +   VH F A +E HP T 
Sbjct: 465 Y-YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTE 523

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           +I ++ E L++EM+ +GY P+TS  L D +E  KV+ +  HSE+LA+ F L+NTP  +PI
Sbjct: 524 QIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPI 583

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            +MKNLR C DCH+A KLIS I  REI VRD +RFH F D  CSCRD+W
Sbjct: 584 RIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 39/417 (9%)

Query: 91  ELIQVHADIIKFGYNSIL-IICNSLVDSYCKIR-CLDLARRVFK--EMPQKDSVSFNALI 146
           EL QVHA IIK   N+ L I+  + V   C        A+++FK  E  + ++  +N+ +
Sbjct: 43  ELRQVHAQIIK--TNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCL 100

Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
              A+     +AI LF  ++     P  FT ++ L A + L D++ GR +H  V K  F 
Sbjct: 101 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI------------------- 247
            N+++ N ++ LY+    + EAR LF +MP+ D V++N+MI                   
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220

Query: 248 ---TCYAWNE---------QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
                 +W           + KE++ LF +++      ++     +L+  A+   L +G 
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 280

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
           +IH  +        V+++N+L+DMY KCG  EEA ++F  +   + V W+AMI      G
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSG 414
             EEAL LF +M +  I  +  TF  +L A + +  +S G++  + + R  G +  +   
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ 470
             ++D+ +++G L +A +    MP + N V W AL+ AC  + + +   ++ + +++
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLE 457



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 136/249 (54%), Gaps = 3/249 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ V+ N++I+  +K G+   A +LF+ M +R   SWT +I GY Q  + +EA  LF
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  + G   + VT   +L+ C++    +  +++H    + G+   + I N+L+D Y K
Sbjct: 249 AKME-EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             CL+ A +VF+EM ++  VS++A+I G A  G  EEA++LF +M  +G +P+  TF   
Sbjct: 308 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL 367

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EV 238
           L A   +  I+ GR+  A + +    +  +     ++DL S+   + EA +    MP + 
Sbjct: 368 LHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427

Query: 239 DGVSYNVMI 247
           +GV +  ++
Sbjct: 428 NGVVWGALL 436



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 220/495 (44%), Gaps = 89/495 (17%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGC-SEPDTANELIQVHAD 98
           W   +   ++ +   +A  LF  +R      PD  T +++L  C +  D +N  I +H  
Sbjct: 96  WNSCLKALAEGDSPIDAIMLFYRLRQYDVC-PDTFTCSSVLRACLNLLDLSNGRI-LHGV 153

Query: 99  IIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE-- 156
           + K G+ S L + N +V  Y     +  AR +F++MPQ+D V++N +I    K+G +E  
Sbjct: 154 VEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGA 213

Query: 157 -----------------------------EAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
                                        EAI LF +M+  G K ++ T  A L+A   L
Sbjct: 214 YDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADL 273

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             + LG ++H +  +  F  NV ++N L+D+Y K  C+ EA K+F EM E   VS++ MI
Sbjct: 274 GALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMI 333

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH-TQTIVTTA 306
              A + + +E+L+LF ++     + +   F  LL   ++   +  GR+   + T     
Sbjct: 334 GGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGI 393

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFI 365
           I +++    +VD+ ++ G   EA E   N+    + V W A++ A               
Sbjct: 394 IPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA--------------- 438

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
             CR + + + A  A  ++   EL  L+ G     +V+ S             ++YA++G
Sbjct: 439 --CRVHKNVEMAEEA--IKHLLELDPLNDG----YYVVLS-------------NIYAEAG 477

Query: 426 SLKDAIQTFKEMPERNI---VSWNAL---------ISACAQNGDAQATLKSFEDMVQ--- 470
             +D  +  K M +R +     W+++         ++    + D +   + +E++++   
Sbjct: 478 RWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMR 537

Query: 471 -SGYQPD-SVSLLSV 483
             GY P+ SV LL +
Sbjct: 538 LKGYVPNTSVVLLDI 552


>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 254/755 (33%), Positives = 391/755 (51%), Gaps = 87/755 (11%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  ++ S N     ++K+  L +AR +FN +       +T L+  Y+  N   EA  LF 
Sbjct: 53  PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLF- 111

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL---IICNSLVDSY 118
                                       N++     D I   +NS++   IICN  V   
Sbjct: 112 ----------------------------NQIPSNTKDTIS--WNSVIKASIICNDFVT-- 139

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
                   A ++F EMPQ++S+S+  +I GF   G   EA + F  M ++          
Sbjct: 140 --------AVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVD--------- 182

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
                                       ++V   NA+++ Y  +  V +A +LF +MP  
Sbjct: 183 ----------------------------KDVATWNAMVNGYCNNGRVNDALRLFCQMPSR 214

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           D +S+  +I     N +  ++L  F+ +  F+    S       LS  A  LD   G QI
Sbjct: 215 DVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQI 274

Query: 298 HTQTI---VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           H           + E  V+ SLV  YA C R  +A ++F      + V WTA+++     
Sbjct: 275 HCCMFKFGFCCGLDEF-VSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLN 333

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
               EAL +F EM R N+  ++++F S L +   L  L  G+ +H+  I+ G  + V++G
Sbjct: 334 DKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTG 393

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           ++L+ MY+K G + DA+  FK + E+N+VSWN++I  CAQ+G     L  F++M++ G +
Sbjct: 394 NSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVE 453

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
            D ++L  +LSACS  G++++   +F    +K  ++   EHYA MVD+L R G  +EAE 
Sbjct: 454 SDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEA 513

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           L   MP E + ++W  ++++CR+H +L+ A++AA ++F+ME    AA YV +SN+YA + 
Sbjct: 514 LATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAA-YVLLSNLYASSR 572

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +W  V++++  M+  G+ K    SW+ LK   H F + D  HP T EI  K+  L  +++
Sbjct: 573 RWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLR 632

Query: 655 KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
           + GY PD   ALHD + E   E L YHSERLAIAF L++T EGS I +MKNLR C DCH 
Sbjct: 633 ELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHT 692

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AI L++KI  REI VRDSSRFHHFK+G CSC D+W
Sbjct: 693 AITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 179/392 (45%), Gaps = 47/392 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM--VDRTAVSWTILIGGYSQKNQFREAFK 58
           MP +N++S   +I G++ +G +  A   FN+M  VD+   +W  ++ GY    +  +A +
Sbjct: 147 MPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALR 206

Query: 59  LFVDMRTDGGSDPDYVTFATLLSG-------------------------------CSEPD 87
           LF  M +      D +++ +++ G                               C    
Sbjct: 207 LFCQMPSR-----DVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSA 261

Query: 88  TANEL-----IQVHADIIKFGYNSIL--IICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
            A  L     IQ+H  + KFG+   L   +  SLV  Y   + +  A +VF E   K+ V
Sbjct: 262 AAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVV 321

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
            + AL+TG      + EA+++F EM      P++ +F +AL++ VGL D+  GR +HA  
Sbjct: 322 VWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAG 381

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESL 260
           +K      V+  N+L+ +YSK   + +A  +F  + E + VS+N +I   A +     +L
Sbjct: 382 IKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWAL 441

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDM 319
            LF+E+     +  +   + LLS  +    LQ  R          ++   V+    +VD+
Sbjct: 442 VLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDV 501

Query: 320 YAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             +CG  EEA+ +  ++    +++ W  ++SA
Sbjct: 502 LGRCGEVEEAEALATSMPVEANSMVWLVLLSA 533


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/679 (34%), Positives = 387/679 (56%), Gaps = 28/679 (4%)

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC--KIRCLDLARRVFKEMPQK 137
           L  C     AN   Q+HA  IK    +   + + L+  Y   +I  L  A  +F  + + 
Sbjct: 22  LQNCGTEREAN---QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEP 78

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
             VS+N LI  + +   + +AI LF ++    F P  FT    L     L  +  G+Q+H
Sbjct: 79  TLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIH 137

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
             V+K  F  + FV ++L+ +YSK   +   RK+F  M + D VS+N +I  YA   + +
Sbjct: 138 GLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIE 197

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
            +L++F E+     ++  F ++ L+  ++    L+  R +  +  +  ++S     N+++
Sbjct: 198 LALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS----WNAMI 249

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           + Y K G    AKE+F  +   S V W +MI+ Y +     +AL LF  M R +IS +  
Sbjct: 250 NGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYT 309

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T    + A++ + SL  G+ +HS++++SGF ++   G+ L++MY+K GS+K A++ F+ +
Sbjct: 310 TILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSI 369

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P++ +  W ++I     +G  + TL+ F++M ++G +P +++ + VL+ACSH G  E+  
Sbjct: 370 PKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAH 429

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
           +YF  MT  Y ++P  EHY  ++D+LCR+G  +EA+  + +MP + ++++W+S+++  R 
Sbjct: 430 RYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRK 489

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAP-----YVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
           H N+   + AA  L       D AP     YV +SN+YA AG WE V QV++ M+++G++
Sbjct: 490 HGNIRMGEYAAQHLI------DLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMK 543

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL--HDED 670
           K    S +E +  +H F   D+ HPQT EI  K+  + +++   G+ PDT+  L   +ED
Sbjct: 544 KDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEED 603

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            E + E L+ HSERLAIAF L+N   GSPI ++KNLR C DCHA  KL+S I  REI +R
Sbjct: 604 NEKEAE-LETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIR 662

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D SRFHHFK G CSC+DFW
Sbjct: 663 DGSRFHHFKSGSCSCKDFW 681



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 237/492 (48%), Gaps = 27/492 (5%)

Query: 3   NQNTVSTNML-ISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           N  +VS+ +L +    +  NL  A  LF+ + + T VSW +LI  Y +  +  +A  LF 
Sbjct: 45  NHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFC 104

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            +  D    PD  T   +L GC+      E  Q+H  ++K G+     + +SLV  Y K 
Sbjct: 105 KLLCD--FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC 162

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++L R+VF  M  KD VS+N+LI G+A+ G  E A+++F EM     +   F++   +
Sbjct: 163 GEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP----EKDSFSWTILI 218

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
                   +   R V   +     + N    NA+++ Y K      A++LF +MPE   V
Sbjct: 219 DGLSKSGKLEAARDVFDRMP----IRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLV 274

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIH 298
           ++N MIT Y  N+Q+ ++LKLF  +   R D S   ++T+L  V   +  + L  GR +H
Sbjct: 275 TWNSMITGYERNKQFTKALKLFEVM--LREDISP-NYTTILGAVSAASGMVSLGTGRWVH 331

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           +  + +   ++  +   L++MY+KCG  + A  +F ++       WT++I      G +E
Sbjct: 332 SYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVE 391

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF----VIRSGFMSNVFSG 414
           + L LF EMCR  +     TF  +L A +        +  H +        G   ++   
Sbjct: 392 QTLELFDEMCRTGLKPHAITFIGVLNACSHAG---FAEDAHRYFKMMTYDYGIKPSIEHY 448

Query: 415 SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
             L+D+  ++G L++A  T + MP + N V W +L+S   ++G+ +    + + ++    
Sbjct: 449 GCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLID--L 506

Query: 474 QPDSVSLLSVLS 485
            PD+     +LS
Sbjct: 507 APDTTGCYVILS 518



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 42/359 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++ VS N LI GY + G +  A E+F  M ++ + SWTILI G S+  +   A  +F
Sbjct: 175 MEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVF 234

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M                                         NS  +  N++++ Y K
Sbjct: 235 DRMPIR--------------------------------------NS--VSWNAMINGYMK 254

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               + A+ +F +MP++  V++N++ITG+ +     +A+KLF  M      P+  T   A
Sbjct: 255 AGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGA 314

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           +SA  G+  +  GR VH+++VK+ F  +  +   L+++YSK   V  A ++F  +P+   
Sbjct: 315 VSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKL 374

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK-LDLQIGRQIHT 299
             +  +I     +   +++L+LF E+  T        F  +L+  ++        R    
Sbjct: 375 GHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKM 434

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            T        ++    L+D+  + G  EEAK+    +    + V WT+++S   + GN+
Sbjct: 435 MTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNI 493


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 330/558 (59%), Gaps = 3/558 (0%)

Query: 194 RQVHAFVVKTNFVENV--FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +Q+HAF ++     N      + +  + S    +  A  +F  +   +  ++N +I  YA
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            ++    +   +R++  +  +     +  LL  ++  L+++ G  IH+ TI     S V 
Sbjct: 95  ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVF 154

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL+ +YA CG  E A ++F  +     V W +MI+ +   G   EAL LF EM    
Sbjct: 155 VQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEG 214

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T  S+L ASAEL +L LG+++H ++++ G   N    ++LLD+YAK G++++A 
Sbjct: 215 VEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQ 274

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F EM ERN VSW +LI   A NG  +  L+ F++M   G  P  ++ + VL ACSHCG
Sbjct: 275 RVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCG 334

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           +++EG +YF  M ++  + P+ EHY  MVD+L R+G   +A + +  MP +P+ ++W ++
Sbjct: 335 MLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 394

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C IH +L   + A   L  +E  + +  YV +SN+YA   +W  V  ++++M + GV
Sbjct: 395 LGACTIHGHLGLGEIARSHLLNLEP-KHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGV 453

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +K   YS VEL ++V+ FT  D  HPQ+ ++   +E + + +K EGY P T+  L D +E
Sbjct: 454 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEE 513

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E K ++L YHSE++AIAF L+NTP G+PI VMKNLR C DCH AIKLI+KI  REI +RD
Sbjct: 514 EEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRD 573

Query: 732 SSRFHHFKDGFCSCRDFW 749
            SRFHHF+ G CSC+D+W
Sbjct: 574 RSRFHHFRGGSCSCKDYW 591



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 2/335 (0%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A  VF  +   +  ++N +I G+A+      A   + +M     +P   T+   L A
Sbjct: 68  MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKA 127

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                ++  G  +H+  ++  F   VFV N+LL +Y+       A K+F  M E D V++
Sbjct: 128 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAW 187

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  +A N +  E+L LFRE+     +   F   +LLS  A    L++GR++H   + 
Sbjct: 188 NSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 247

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                   V NSL+D+YAKCG   EA+ +F+ +S  + V WT++I      G  EEAL L
Sbjct: 248 VGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALEL 307

Query: 364 FIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F EM    +   + TF  +L A +    L  G +         G +  +     ++D+ +
Sbjct: 308 FKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLS 367

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
           ++G +K A +  + MP + N V W  L+ AC  +G
Sbjct: 368 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 402



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 9/344 (2%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFAT 78
           S  ++ A  +F  + +    +W  +I GY++ +    AF LF         +PD  T+  
Sbjct: 65  SAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAF-LFYRQMVVSCVEPDTHTYPF 123

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL   S+     E   +H+  I+ G+ S++ + NSL+  Y      + A +VF+ M ++D
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            V++N++I GFA  G   EA+ LF EM   G +P  FT  + LSA   L  + LGR+VH 
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHV 243

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           +++K    +N  V N+LLDLY+K   + EA+++F EM E + VS+  +I   A N   +E
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQIHTQTIVTTAISEVKVAN 314
           +L+LF+E++      S+  F  +L   ++   L  G    R++  +  +   I  ++   
Sbjct: 304 ALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGI---IPRIEHYG 360

Query: 315 SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
            +VD+ ++ G  ++A E   N+    + V W  ++ A    G+L
Sbjct: 361 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 404



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N+  TN L+  Y K G +  A+ +F+ M +R AVSWT LI G +      EA +LF +
Sbjct: 251 SKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKE 310

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M    G  P  +TF  +L  CS     +E
Sbjct: 311 MEGQ-GLVPSEITFVGVLYACSHCGMLDE 338


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/698 (33%), Positives = 383/698 (54%), Gaps = 43/698 (6%)

Query: 91  ELIQVHADIIKFG-----YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           +L Q H  +I+ G     Y++  +   + + S+     L+ AR+VF E+P+ +S ++N L
Sbjct: 45  QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS---LEYARKVFDEIPKPNSFAWNTL 101

Query: 146 ITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           I  +A       +I  F++M       P+ +TF   + A   ++ ++LG+ +H   VK+ 
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
              +VFVAN+L+  Y     +  A K+F  + E D VS+N MI  +       ++L+LF+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           +++      S      +LS  A   +L+ GRQ+ +          + +AN+++DMY KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281

Query: 325 RFEEAKEIFANLSHISTVPWT-------------------------------AMISAYVQ 353
             E+AK +F  +     V WT                               A+ISAY Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341

Query: 354 KGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
            G   EAL +F E+  + N+  +Q T  S L A A++ +L LG+ +HS++ + G   N  
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             SAL+ MY+K G L+ + + F  + +R++  W+A+I   A +G     +  F  M ++ 
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461

Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
            +P+ V+  +V  ACSH GL++E    F+ M   Y + P+++HYA +VD+L RSG  ++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
            K +  MP  P   +W +++ +C+IH NL  A+ A  +L ++E   D A +V +SNIYA 
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA-HVLLSNIYAK 580

Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
            G+WE+VS+++K MR  G++K    S +E+   +H F + D  HP + ++  K+  +M++
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640

Query: 653 MKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
           +K  GY+P+ S  L   E+EE+K +SL  HSE+LAI + LI+T     I V+KNLR C D
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH+  KLIS++  REI VRD  RFHHF++G CSC DFW
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 224/467 (47%), Gaps = 34/467 (7%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
            +L  AR++F+ +    + +W  LI  Y+       +   F+DM ++    P+  TF  L
Sbjct: 78  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           +   +E  + +    +H   +K    S + + NSL+  Y     LD A +VF  + +KD 
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           VS+N++I GF ++G  ++A++LF +M+    K S  T    LSA   + ++  GRQV ++
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK-- 257
           + +     N+ +ANA+LD+Y+K   + +A++LF  M E D V++  M+  YA +E Y+  
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317

Query: 258 -----------------------------ESLKLFRELQFTR-FDRSQFPFSTLLSVVAN 287
                                        E+L +F ELQ  +    +Q    + LS  A 
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L++GR IH+            V ++L+ MY+KCG  E+++E+F ++       W+AM
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
           I      G   EA+++F +M  AN+  +  TF ++  A +    +   + L H      G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
            +      + ++D+  +SG L+ A++  + MP     S W AL+ AC
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 174/385 (45%), Gaps = 35/385 (9%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y   G+L +A ++F ++ ++  VSW  +I G+ QK    +A +LF  M ++   
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DV 228

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
              +VT   +LS C++        QV + I +   N  L + N+++D Y K   ++ A+R
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288

Query: 130 VF-------------------------------KEMPQKDSVSFNALITGFAKEGLNEEA 158
           +F                                 MPQKD V++NALI+ + + G   EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348

Query: 159 IKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           + +F E+Q     K +  T  + LSA   +  + LGR +H+++ K     N  V +AL+ 
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +YSK   + ++R++F  + + D   ++ MI   A +    E++ +F ++Q      +   
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEA-KEIFAN 335
           F+ +    ++   +     +  Q      I  E K    +VD+  + G  E+A K I A 
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528

Query: 336 LSHISTVPWTAMISAYVQKGNLEEA 360
               ST  W A++ A     NL  A
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLA 553



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 2/193 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ V+   ++ GY  S +   ARE+ NSM  +  V+W  LI  Y Q  +  EA  +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +++       + +T  + LS C++         +H+ I K G      + ++L+  Y K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ +R VF  + ++D   ++A+I G A  G   EA+ +F +MQ    KP+  TF   
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472

Query: 181 LSA--GVGLADIA 191
             A    GL D A
Sbjct: 473 FCACSHTGLVDEA 485



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 46/260 (17%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS--GSLKDAIQTFKEMPERNIVSWNAL 448
           SL   KQ H  +IR+G  S+ +S S L  M A S   SL+ A + F E+P+ N  +WN L
Sbjct: 42  SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101

Query: 449 ISACAQNGDAQATLKSFEDMV----------------QSGYQPDSVSL------LSVLSA 486
           I A A   D   ++ +F DMV                ++  +  S+SL      ++V SA
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161

Query: 487 CS--------------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
                            CG ++   + F ++ +K  +      + SM++   + G  D+A
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS-----WNSMINGFVQKGSPDKA 216

Query: 533 EKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            +L  +M  E      +    V+++C   +NLEF ++    + +     +     AM ++
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276

Query: 590 YAVAGQWESVSQVKKAMRER 609
           Y   G  E   ++  AM E+
Sbjct: 277 YTKCGSIEDAKRLFDAMEEK 296


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/762 (31%), Positives = 409/762 (53%), Gaps = 36/762 (4%)

Query: 21  NLATARELF-NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
           +L+ A+E+F N     T   +  LI GY+     +EA  LF+ M   G S PD  TF   
Sbjct: 81  SLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGIS-PDKYTFPFG 139

Query: 80  LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
           LS C++       IQ+H  IIK  Y   L + NSLV  Y +   LD AR+VF EM +++ 
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           VS+ ++I G+A+    ++A+ LF  M +     P+  T    +SA   L D+  G +V+ 
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
           F+  +    N  + +AL+D+Y K + +  A++LF E    +    N M + Y      KE
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L +   +  +     +    + +S  +   ++  G+  H   +     S   + N+L+D
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI------ 372
           MY KC R + A  IF  +S+ + V W ++++ Y++ G ++ A   F  M   NI      
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439

Query: 373 --------------------------SADQATFASILRASAELASLSLGKQLHSFVIRSG 406
                                     + D  T  SI  A   L +L L K ++ ++ ++ 
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              +V  G+ L+DM+++ G  + A+  F  +  R++ +W A I A A  G+ +  ++ F 
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           +M++ G +PD V  +  L+AC H GL+++G + FNSM + + + P+  HY  MVD+L R+
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  +EA +L+  MP EP++++W+S++ +CR+  N+E A  AA+++  +   R  + YV +
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGS-YVLL 678

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           SN+YA AG+W  +++V+ +M+E+G+RK    S ++++ K H FT+ DE HP+  +I   +
Sbjct: 679 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAML 738

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           + L Q     G+ PD S  L D DE+ K+  L  HSE+LA+AF LI++ +G+ I ++KNL
Sbjct: 739 DELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNL 798

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           R C+ CH+  K  SK+  REI +RD++RFH  + G CSC DF
Sbjct: 799 RVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 268/599 (44%), Gaps = 89/599 (14%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKI---RCLDLARRVFKEMPQKDSV-SFN 143
           T +EL   H  + K G +  +     LV   C++     L  A+ VF+      +   +N
Sbjct: 43  TIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYN 102

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
           +LI G+A  GL +EAI LF+ M + G  P  +TF   LS      D   G Q+H  ++K 
Sbjct: 103 SLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKM 162

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
           ++ +++FV N+L+  Y++   +  ARK+F EM E + VS+  MI  YA  E  K+++ LF
Sbjct: 163 DYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLF 222

Query: 264 RELQFTRFDRSQFPFST----LLSVVANKLDLQIGRQIHTQTIVTTAISEVK--VANSLV 317
              +  R D    P S     ++S  A   DL+ G +++    +  +  EV   + ++LV
Sbjct: 223 --FRMVR-DEDVIPNSVTMVCVISACAKLEDLETGEKVY--DFIRDSGIEVNDLMISALV 277

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMY KC   + AK +F      +     AM S YV++G  +EAL +   M  + I  D+ 
Sbjct: 278 DMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRI 337

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK-------------- 423
           +  S + + ++L ++  GK  H +V+R+GF S     +AL+DMY K              
Sbjct: 338 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 397

Query: 424 -----------------SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
                            +G +  A +TF  MPE+NIVSWN +ISA  Q    +  ++ F 
Sbjct: 398 SNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFH 457

Query: 467 DM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            M  Q     D V+++S+ SAC H G ++   ++     +K +++       ++VD+  R
Sbjct: 458 YMQSQECVNVDGVTMMSIASACGHLGALDLA-KWIYYYIEKNRIQLDVRLGTTLVDMFSR 516

Query: 526 SGCFDEAEKL----------------------------------MAQMPFEPDEIMWSSV 551
            G  + A  +                                  M +   +PD +++   
Sbjct: 517 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGA 576

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAM 606
           + +C  H  L   ++  +    MEKL   +P    Y  M ++   AG  E   Q+ K M
Sbjct: 577 LTAC-CHGGL--VQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDM 632



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 34/484 (7%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y + G L  AR++F+ M +R  VSWT +I GY+++   ++A  LF  M  D   
Sbjct: 172 NSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDV 231

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT   ++S C++ +      +V+  I   G     ++ ++LVD Y K   +D+A+R
Sbjct: 232 IPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKR 291

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F E    +    NA+ + + ++GL +EA+ +   M   G +P   +  +A+S+   L +
Sbjct: 292 LFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRN 351

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---------------------------- 221
           I  G+  H +V++  F     + NAL+D+Y K                            
Sbjct: 352 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 411

Query: 222 ---HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFP 277
              +  V  A + F  MPE + VS+N +I+       Y+E++++F  +Q     +     
Sbjct: 412 YIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVT 471

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
             ++ S   +   L + + I+          +V++  +LVDM+++CG  E A  IF +L+
Sbjct: 472 MMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 531

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           +     WTA I A    GN+E A+ LF EM    +  D   F   L A      +  GK+
Sbjct: 532 NRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKE 591

Query: 398 L-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQN 455
           + +S     G          ++D+  ++G L++A+Q  K+MP E N V WN+L++AC   
Sbjct: 592 IFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQ 651

Query: 456 GDAQ 459
           G+ +
Sbjct: 652 GNVE 655



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 4/250 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M N+  V+ N +++GY+++G +  A E FN+M ++  VSW  +I    Q+N + EA ++F
Sbjct: 397 MSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVF 456

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M++    + D VT  ++ S C      +    ++  I K      + +  +LVD + +
Sbjct: 457 HYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSR 516

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               + A  +F  +  +D  ++ A I   A  G  E AI+LF EM   G KP    F  A
Sbjct: 517 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGA 576

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFV--ENVFVANALLDLYSKHDCVVEARKLFGEMP-E 237
           L+A      +  G+++   + K + V  E+V     ++DL  +   + EA +L  +MP E
Sbjct: 577 LTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG-CMVDLLGRAGLLEEALQLIKDMPTE 635

Query: 238 VDGVSYNVMI 247
            + V +N ++
Sbjct: 636 PNDVIWNSLL 645


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/645 (34%), Positives = 361/645 (55%), Gaps = 47/645 (7%)

Query: 105 NSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE 164
           +S +I  N ++ ++ +   L+ A RVF+ M  K +V++N+++ G++              
Sbjct: 2   SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNR------------ 49

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
                                    I + RQ+   + + +    +F  N +L  Y  +  
Sbjct: 50  ----------------------RGKIKVARQLFDRIPEPD----IFSYNIMLACYLHNAD 83

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           V  AR  F +MP  D  S+N MI+ ++ N    ++ +LF  +      R+   ++ ++S 
Sbjct: 84  VESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPV----RNSVSWNAMISG 139

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                DL + +Q+     V + ++      +++  + K G+ E A++ F  +   + V W
Sbjct: 140 YVESGDLDLAKQLFEVAPVRSVVA----WTAMITGFMKFGKIELAEKYFEEMPMKNLVTW 195

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            AMI+ Y++    E  L LF  M  +    + ++ +S+L   + L++L LGKQ+H  + +
Sbjct: 196 NAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICK 255

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           S    N+ +G++LL MY K G L+DA + F  MP++++V+WNA+IS  AQ+G  +  L  
Sbjct: 256 SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYL 315

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F+ M   G +PD ++ ++VLSAC+H G ++ G++YFNSM + Y +  K +HY  +VD+L 
Sbjct: 316 FDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLG 375

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R G   EA  L+ +MPF+P   ++ +++ +CRIHKNLE A+ AA  L  ++    AA YV
Sbjct: 376 RGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDP-ESAAGYV 434

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            ++N+YA   +W+ V+ V+++M++  V K   YSW+E+KS VH F + D +HP+   I  
Sbjct: 435 QLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHE 494

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           K+  L ++M+  GY PD   ALHD  EE K + L  HSE+LAIA+ LI  P G+PI V K
Sbjct: 495 KLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFK 554

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH+A K IS I GR I VRD++RFHHF+ G CSC D+W
Sbjct: 555 NLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 171/340 (50%), Gaps = 16/340 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +  S N++++ Y+ + ++ +AR  F+ M  +   SW  +I G+SQ     +A +LF
Sbjct: 63  IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSILIICNSLVDS 117
           + M        + V++  ++SG  E    D A +L +V A +        ++   +++  
Sbjct: 123 LVMPVR-----NSVSWNAMISGYVESGDLDLAKQLFEV-APV------RSVVAWTAMITG 170

Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           + K   ++LA + F+EMP K+ V++NA+I G+ +    E  +KLF  M   GF+P+  + 
Sbjct: 171 FMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSL 230

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           ++ L     L+ + LG+QVH  + K+    N+    +LL +Y K   + +A KLF  MP+
Sbjct: 231 SSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQ 290

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D V++N MI+ YA +   +++L LF +++          F  +LS   +   + +G + 
Sbjct: 291 KDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEY 350

Query: 298 HTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANL 336
               +    + ++      +VD+  + G+  EA ++   +
Sbjct: 351 FNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/751 (31%), Positives = 398/751 (52%), Gaps = 8/751 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P +   S ++++S     G +  A E   ++    A    ++I G++       A   +
Sbjct: 37  LPPKRGSSKSLVVS-LAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAY 95

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG + PD  TF  ++  C+     +E    H  +IK G    +  CNSLV  Y K
Sbjct: 96  RGMLEDG-ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAA 179
           +  ++ A RVF  MP +D V++N ++ G+   GL   A+  F EM   L  +       A
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           AL+A         G+++H +V++    +++ V  +LLD+Y K   V  AR +F  MP   
Sbjct: 215 ALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            V++N MI  YA NE+  E+   F +++             LL+  A       GR +H 
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHG 334

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             +    +  V +  +L++MY K G+ E +++IF  +++ + V W  MI+AY+ K    E
Sbjct: 335 YVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTE 394

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+ LF+E+    +  D  T ++++ A   L SL   +Q+HS++I  G+  N    +A+L 
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYA+SG +  + + F +M  ++++SWN +I   A +G  +  L+ F++M  +G QP+  +
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            +SVL+ACS  GL++EG  +FN M Q+Y + P+ EHY  M D+L R G   E  + +  M
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P +P   +W S++ + R   +++ A+ AA+++F++E   +   Y+ +S++YA AG+WE V
Sbjct: 575 PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEH-DNTGCYIVLSSMYADAGRWEDV 633

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            +V+  M+E+G+R+    S VEL S    F   D  H Q+  I    + L +++K+    
Sbjct: 634 ERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKE---T 690

Query: 660 PDTSCALHDEDEEIKVESL-KYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            DT    +      +  ++   HS RLA+ F LI++  GSPILV KN+R C  CH A+KL
Sbjct: 691 DDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKL 750

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IS+ +GR I V DS  +H F DG C C D+W
Sbjct: 751 ISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/645 (34%), Positives = 364/645 (56%), Gaps = 49/645 (7%)

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVE 164
           S ++  N  + S+ +   L+ AR VF++M  + +V++N +++G+ K  G  +EA +LF +
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           +     +P   ++                                   N +L  Y +   
Sbjct: 131 IP----EPDSVSY-----------------------------------NIMLVCYLRSYG 151

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           V  A   F +MP  D  S+N +I+ +A N Q +++  LF  +     +++   +S ++S 
Sbjct: 152 VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISG 207

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                DL+   +++        +  V V  +++  Y K G+ E A+ IF  ++  + V W
Sbjct: 208 YVEHGDLEAAEELYKNV----GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            +MI+ YV+    E+ L +F  M  + +  +  + +S+L   + L++L LG+Q+H  V +
Sbjct: 264 NSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSK 323

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           S    +  + ++L+ MY K G L  A + F EMP ++++SWNA+IS  AQ+G  +  L  
Sbjct: 324 SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHL 383

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F+ M     +PD ++ ++V+ AC+H G ++ G+QYF SM +++ +  K  HY  ++D+L 
Sbjct: 384 FDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLG 443

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G  DEA  L+ +MPF+P   ++ +++ +CRIHKNL+ A+ AA  L  ++    A  YV
Sbjct: 444 RAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDP-TSATGYV 502

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            ++NIYA   +W+ V++V+K M+E  V K+  YSW+E+KS  H F ++D LHP+   I +
Sbjct: 503 QLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHK 562

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           K+  L  +MK  GY PD   ALHD +EE K + L +HSE+LAIAF L+ T  G+PI V K
Sbjct: 563 KLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFK 622

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH AIK IS I  REI VRD++RFHHF++GFCSC D+W
Sbjct: 623 NLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 53/452 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-KNQFREAFKLFVDM 63
           + VS N  I+ +V++ +L +AR +F  M  RT V+W  ++ GY++   + +EA +LF   
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF--- 128

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             D   +PD V++                             +I+++C      Y +   
Sbjct: 129 --DKIPEPDSVSY-----------------------------NIMLVC------YLRSYG 151

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A   F +MP KD  S+N LI+GFA+ G  ++A  LF  M     + +  +++A +S 
Sbjct: 152 VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISG 207

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            V   D+    +++    K   +++V V  A+L  Y K   V  A ++F  M   + V++
Sbjct: 208 YVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  Y  N + ++ LK+F+ +  +R   +    S++L   +N   L +GRQ+H Q + 
Sbjct: 264 NSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH-QLVS 322

Query: 304 TTAISEVKVA-NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            + +S+   A  SL+ MY KCG  + A ++F  +     + W AMIS Y Q G   +AL+
Sbjct: 323 KSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALH 382

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF +M    +  D  TF +++ A      + LG Q   S     G  +     + ++D+ 
Sbjct: 383 LFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLL 442

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++G L +A+   KEMP + +   +  L+ AC
Sbjct: 443 GRAGRLDEAVSLIKEMPFKPHAAIYGTLLGAC 474



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 185/382 (48%), Gaps = 26/382 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  ++VS N+++  Y++S  +  A   FN M  +   SW  LI G++Q  Q ++AF LF
Sbjct: 131 IPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLF 190

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    G     V+++ ++SG  E        +++ ++   G  S+ ++  +++  Y K
Sbjct: 191 SVMPEKNG-----VSWSAMISGYVEHGDLEAAEELYKNV---GMKSV-VVETAMLTGYMK 241

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++LA R+F+ M  K+ V++N++I G+ +    E+ +K+F  M     +P+  + ++ 
Sbjct: 242 FGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSV 301

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L     L+ + LGRQ+H  V K+   ++     +L+ +Y K   +  A KLF EMP  D 
Sbjct: 302 LLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDV 361

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+N MI+ YA +   +++L LF +++          F  ++    +   + +G Q    
Sbjct: 362 ISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKS 421

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                 I    V  + ++D+  + GR +EA      +S I  +P+    + Y   G L  
Sbjct: 422 MKKEFGIEAKPVHYTCVIDLLGRAGRLDEA------VSLIKEMPFKPHAAIY---GTLLG 472

Query: 360 ALNLFIEMCRANISADQATFAS 381
           A       CR + + D A FA+
Sbjct: 473 A-------CRIHKNLDLAEFAA 487



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 38/375 (10%)

Query: 295 RQIH-------TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
           R+IH       T  +     S+V   N  +  + +    E A+ +F  +S  +TV W  M
Sbjct: 51  RRIHLVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTM 110

Query: 348 ISAYVQ-KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           +S Y +  G ++EA  LF ++   +  +        LR+    A+L+   ++        
Sbjct: 111 LSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMP------- 163

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
            + ++ S + L+  +A++G ++ A   F  MPE+N VSW+A+IS   ++GD +A     E
Sbjct: 164 -VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAA----E 218

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
           ++ ++      V   ++L+     G +E   + F  M  K  L       A  V+  CR+
Sbjct: 219 ELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVK-NLVTWNSMIAGYVEN-CRA 276

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
               +  K M +    P+ +  SSV+  C     L   ++    + K    +D     ++
Sbjct: 277 EDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSL 336

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
            ++Y   G  +S  ++   M  + V      SW  + S      A            RK 
Sbjct: 337 ISMYCKCGDLDSAWKLFLEMPRKDV-----ISWNAMISGYAQHGAG-----------RKA 380

Query: 647 ENLMQEMKKEGYKPD 661
            +L  +M+    KPD
Sbjct: 381 LHLFDKMRNGTMKPD 395


>gi|302765350|ref|XP_002966096.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
 gi|300166910|gb|EFJ33516.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
          Length = 598

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/574 (36%), Positives = 346/574 (60%), Gaps = 6/574 (1%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +AA L       ++  G++VH  + +  +    F+ N L+ +Y K   + +A   F  + 
Sbjct: 30  YAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKCSSIDDAALAFDSIR 89

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + D  S+N+MI  +A N     ++ +F+ ++  R  R++    T ++V+A  LDL+ G++
Sbjct: 90  KKDLFSWNIMIAAFAENGCLDRAVAVFQLMEPARIKRNR---GTFVAVLAAGLDLEQGKK 146

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH     +       VA +L+ MY  CG  ++A+++F  +  +  V W AMI+AYVQ   
Sbjct: 147 IHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDQ 206

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GS 415
              AL +F  +    +  ++ T+ + L A A LA  S G+ LH  V  +G +   F   +
Sbjct: 207 GRGALEVFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVAN 266

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +L++MY KSG+L+ A + F+ MP R+I SWN L++    NG     +  F +    G++P
Sbjct: 267 SLVNMYGKSGNLEAAEEIFESMPSRDISSWNVLMTVYGHNGLGDLAVDRFTESCLEGFEP 326

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           DS++ L+VL ACSH GL++ G++   S+ + + + P + HY  +VD+L RSG   +AE L
Sbjct: 327 DSITFLAVLQACSHAGLLDTGVELLVSIQEDWGIDPTQYHYLCVVDLLGRSGELVKAEAL 386

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +  MPFEP+E  W S++  CR++ ++   ++A  +L  M +  D++PYV M+NIYA    
Sbjct: 387 INNMPFEPEEGAWRSLLGGCRVNSDVGRGERATQRLLVMSE--DSSPYVLMANIYASIRN 444

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           ++   +++  M +R V+K    SW+E++ ++H F AND+LH +  EI   ++ L  E+++
Sbjct: 445 FDLAERLRSVMADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEIYAGLDRLFVELQR 504

Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
           EGY+PDT  AL+D +EE KV  L +H E+LAI F L++TP+GSP+ V+KNLR C DCHAA
Sbjct: 505 EGYRPDTRVALYDVEEEKKVRMLLHHGEKLAIMFGLMSTPDGSPLFVLKNLRVCADCHAA 564

Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            K+I+KIT R+I +RD+SRFHHF++G CSC D+W
Sbjct: 565 TKIIAKITKRKIVMRDASRFHHFENGKCSCCDYW 598



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 6/385 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A LL  C+      +  +VH  + ++GY +   + N LV  Y K   +D A   F  + 
Sbjct: 30  YAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKCSSIDDAALAFDSIR 89

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           +KD  S+N +I  FA+ G  + A+ +F  M+    K +  TF A L+AG+   D+  G++
Sbjct: 90  KKDLFSWNIMIAAFAENGCLDRAVAVFQLMEPARIKRNRGTFVAVLAAGL---DLEQGKK 146

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V  +    N  VA ALL +Y       +AR++F ++P++D V +N MIT Y  N+Q
Sbjct: 147 IHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDQ 206

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ-TIVTTAISEVKVAN 314
            + +L++F  L+      ++  +   L   A       GR +H + +     ++  KVAN
Sbjct: 207 GRGALEVFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVAN 266

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SLV+MY K G  E A+EIF ++       W  +++ Y   G  + A++ F E C      
Sbjct: 267 SLVNMYGKSGNLEAAEEIFESMPSRDISSWNVLMTVYGHNGLGDLAVDRFTESCLEGFEP 326

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           D  TF ++L+A +    L  G +L   +    G     +    ++D+  +SG L  A   
Sbjct: 327 DSITFLAVLQACSHAGLLDTGVELLVSIQEDWGIDPTQYHYLCVVDLLGRSGELVKAEAL 386

Query: 434 FKEMP-ERNIVSWNALISACAQNGD 457
              MP E    +W +L+  C  N D
Sbjct: 387 INNMPFEPEEGAWRSLLGGCRVNSD 411



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 37/326 (11%)

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
           ++L   RF  +   ++ LL   AN+ +L  G+++H         +E  + N LV MY KC
Sbjct: 16  KDLGQERFCSNTEAYAALLRRCANERNLVDGKRVHEHLRRYGYENETFLGNLLVQMYGKC 75

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              ++A   F ++       W  MI+A+ + G L+ A+ +F  M  A I  ++ TF ++L
Sbjct: 76  SSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVAVFQLMEPARIKRNRGTFVAVL 135

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A  +L     GK++H  V  SG   N    +ALL MY   GS  DA Q F+++P+ ++V
Sbjct: 136 AAGLDLEQ---GKKIHDSVHSSGLERNEMVATALLSMYGACGSTDDARQVFEQVPKLDLV 192

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
            WNA+I+A  QN   +  L+ F  +   G + + V+ L+ L AC+   +  EG      +
Sbjct: 193 CWNAMITAYVQNDQGRGALEVFHRLEMEGVKCNEVTYLAALDACACLAVQSEGRSLHKRV 252

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP----------------------- 540
           ++   L    +   S+V++  +SG  + AE++   MP                       
Sbjct: 253 SEAGLLLTSFKVANSLVNMYGKSGNLEAAEEIFESMPSRDISSWNVLMTVYGHNGLGDLA 312

Query: 541 -----------FEPDEIMWSSVINSC 555
                      FEPD I + +V+ +C
Sbjct: 313 VDRFTESCLEGFEPDSITFLAVLQAC 338



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 208/495 (42%), Gaps = 55/495 (11%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N+L+  Y K  ++  A   F+S+  +   SW I+I  +++      A  +F  M  
Sbjct: 62  TFLGNLLVQMYGKCSSIDDAALAFDSIRKKDLFSWNIMIAAFAENGCLDRAVAVFQLM-- 119

Query: 66  DGGSDPDYV-----TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
               +P  +     TF  +L+   + +      ++H  +   G     ++  +L+  Y  
Sbjct: 120 ----EPARIKRNRGTFVAVLAAGLDLEQGK---KIHDSVHSSGLERNEMVATALLSMYGA 172

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
               D AR+VF+++P+ D V +NA+IT + +      A+++F  ++  G K ++ T+ AA
Sbjct: 173 CGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDQGRGALEVFHRLEMEGVKCNEVTYLAA 232

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVF-VANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L A   LA  + GR +H  V +   +   F VAN+L+++Y K   +  A ++F  MP  D
Sbjct: 233 LDACACLAVQSEGRSLHKRVSEAGLLLTSFKVANSLVNMYGKSGNLEAAEEIFESMPSRD 292

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
             S+NV++T Y  N     ++  F E     F+     F  +L   ++   L  G ++  
Sbjct: 293 ISSWNVLMTVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQACSHAGLLDTGVELLV 352

Query: 300 QTIVTTAISEVKVAN-SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                  I   +     +VD+  + G   +A+ +  N+        W +++         
Sbjct: 353 SIQEDWGIDPTQYHYLCVVDLLGRSGELVKAEALINNMPFEPEEGAWRSLLGG------- 405

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
                     CR N    +       RA+  L  L + +    +V+    M+N+++    
Sbjct: 406 ----------CRVNSDVGRGE-----RATQRL--LVMSEDSSPYVL----MANIYASIRN 444

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS--------FEDMV 469
            D+  +  S+  A +  K+ P  + +     I   A N    A  +         F ++ 
Sbjct: 445 FDLAERLRSVM-ADRNVKKQPGLSWIEVRGRIHTFAANDKLHARKEEIYAGLDRLFVELQ 503

Query: 470 QSGYQPDS-VSLLSV 483
           + GY+PD+ V+L  V
Sbjct: 504 REGYRPDTRVALYDV 518



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 4/192 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N +    L+S Y   G+   AR++F  +     V W  +I  Y Q +Q R A ++F  +
Sbjct: 158 RNEMVATALLSMYGACGSTDDARQVFEQVPKLDLVCWNAMITAYVQNDQGRGALEVFHRL 217

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIR 122
             + G   + VT+   L  C+     +E   +H  + + G   +   + NSLV+ Y K  
Sbjct: 218 EME-GVKCNEVTYLAALDACACLAVQSEGRSLHKRVSEAGLLLTSFKVANSLVNMYGKSG 276

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A  +F+ MP +D  S+N L+T +   GL + A+  F E    GF+P   TF A L 
Sbjct: 277 NLEAAEEIFESMPSRDISSWNVLMTVYGHNGLGDLAVDRFTESCLEGFEPDSITFLAVLQ 336

Query: 183 A--GVGLADIAL 192
           A    GL D  +
Sbjct: 337 ACSHAGLLDTGV 348


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/612 (36%), Positives = 330/612 (53%), Gaps = 71/612 (11%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           + FVA++LL  Y +     +AR +   MP    V ++ +I  +A +   + +  L   ++
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 268 -----------------FTRFDRSQ--------------FP----FSTLLSVVANKLDLQ 292
                              R  R++               P     S  LS V +  D+ 
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-------------- 338
           +G Q+H   +      +  VA +L+DMY KCGR +E   +F   SH              
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233

Query: 339 ---------------------ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
                                ++ V WT++++  VQ G   EA++LF EM    I  +  
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           T   +L A A +A+L  G+  H F +R GF  +++ GSAL+DMYAK G ++DA   F+ M
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P RN+VSWNA+I   A +G+A+  ++ F  M  S  +PD V+   VL ACS  G  EEG 
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YFN M  K+ + P+ EHYA MV +L R+G  D+A  ++ QMPFEPD  +W S++ SCR+
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRV 473

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           H N+  A+ AA+ LF++E   +A  YV +SNIYA    W+ V++++  M+  G++K    
Sbjct: 474 HGNVVLAEVAAENLFQLEP-ENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGC 532

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW+E+K+KVH+  A D  HP    I  K+++L  EM++ G+ P T   LHD +E+ K + 
Sbjct: 533 SWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDI 592

Query: 678 LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHH 737
           L  HSE+LA+A  LI+T  G+P+ V+KNLR C DCH A+K IS    REI VRD++RFHH
Sbjct: 593 LSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHH 652

Query: 738 FKDGFCSCRDFW 749
           FKDG CSC D+W
Sbjct: 653 FKDGKCSCADYW 664



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 194/434 (44%), Gaps = 41/434 (9%)

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
           L  R+  +  + + +++N L++G  + G   +A+   V M   GF P     + ALSA  
Sbjct: 108 LLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVG 167

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLY-------------------------- 219
            + D+A+G Q+H +VVK     +  VA AL+D+Y                          
Sbjct: 168 DVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNA 227

Query: 220 -----SKHDCVVEARKLF----GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                S++  V EA +LF    G   E++ VS+  ++ C   N +  E++ LFRE+Q   
Sbjct: 228 LVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEG 287

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            + +      +L   AN   L  GR  H  ++      ++ V ++LVDMYAKCGR  +A+
Sbjct: 288 IEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDAR 347

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            IF  + + + V W AMI  Y   G  E A+ LF  M  +    D  TF  +L A ++  
Sbjct: 348 MIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAG 407

Query: 391 SLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
               G+   +    + G    +   + ++ +  ++G L DA     +MP E +   W +L
Sbjct: 408 WTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSL 467

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           + +C  +G+      + E++ Q   +P++     +LS       + +G+     M +   
Sbjct: 468 LGSCRVHGNVVLAEVAAENLFQ--LEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVG 525

Query: 509 LRPKKEHYASMVDI 522
           L  KKE   S ++I
Sbjct: 526 L--KKEKGCSWIEI 537



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 174/418 (41%), Gaps = 73/418 (17%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y++ G  A AR + + M  RT V W+ LI  ++       A+ L   MR+D G +P
Sbjct: 61  LLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSD-GVEP 119

Query: 72  DYVTFATLLSGCSEPDTANELI-----------------------------------QVH 96
           + +T+  L+SG +    A + +                                   Q+H
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLH 179

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK----- 151
             ++K G      +  +L+D Y K    D   RVF E    D  S NAL+ G ++     
Sbjct: 180 GYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVS 239

Query: 152 ------------------------------EGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
                                          G + EA+ LF EMQ  G +P+  T    L
Sbjct: 240 EALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVL 299

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +A +  GR  H F ++  F  +++V +AL+D+Y+K   V +AR +F  MP  + V
Sbjct: 300 PAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVV 359

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N MI  YA + + + +++LFR +Q ++       F+ +L   +     + GR    + 
Sbjct: 360 SWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEM 419

Query: 302 IVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
                IS  ++    +V +  + G+ ++A +I   +        W +++ +    GN+
Sbjct: 420 QHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
           G   + F  S+LL  Y + G+  DA      MP R +V W+ALI+A A +GDA+      
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCG 491
           E M   G +P+ ++   ++S  +  G
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSG 135


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/532 (40%), Positives = 312/532 (58%), Gaps = 1/532 (0%)

Query: 218  LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
            +Y   + +  A  +F ++P      +NVMI  +A + ++  SL+L+ ++        +F 
Sbjct: 761  MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820

Query: 278  FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            F   L   A   DLQ G+ IH   +     +++ V  +LVDMYAKCG  E A+ +F  ++
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 338  HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
                V WT+MIS Y   G   E L  F  M  + +  ++ +  S+L A   L +L  G+ 
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 398  LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
             HS+VI++GF  ++   +A++DMY+K GSL  A   F E   +++V W+A+I++   +G 
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 458  AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
             +  +  F+ MV++G +P  V+   VLSACSH GL+EEG  YF  MT+++ +  K  +YA
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060

Query: 518  SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
             MVD+L R+G   EA  L+  MP EPD  +W S++ +CRIH NL+ A+K AD LF ++ +
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPV 1120

Query: 578  RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
              A  +V +SNIYA   +W  V +V+K M  RG  K+  +S VE  ++VH F   D  HP
Sbjct: 1121 H-AGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHP 1179

Query: 638  QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
            Q  ++  K+E L   MK  GY P T   LHD +EE K  +L YHSERLAIAF LINT  G
Sbjct: 1180 QWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPG 1239

Query: 698  SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            + + + KNLR C DCH AIKLISKI  R I VRD  RFH F+DG CSC D+W
Sbjct: 1240 TTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/672 (34%), Positives = 369/672 (54%), Gaps = 12/672 (1%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            +T     L S Y K  +L  AR++F+         W   +  Y ++ Q+ E  +LF  M
Sbjct: 34  HDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLM 93

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-----YNSILIICNSLVDSY 118
               G  PD  T    L  C+       ++++   I  F        S + + ++LV+ Y
Sbjct: 94  ICTAGEAPDNFTIPIALKACA----GLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELY 149

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTF 177
            K   +  A +VF+E  + D+V + +++TG+ +    EEA+ LF +M  +     D  T 
Sbjct: 150 SKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTL 209

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            + +SA   L ++  G  VH  V++  F  ++ + N+LL+LY+K  C   A  LF +MPE
Sbjct: 210 VSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE 269

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
            D +S++ MI CYA NE   E+L LF E+   RF+ +     + L   A   +L+ G++I
Sbjct: 270 KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI 329

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +      +  V+ +L+DMY KC   +EA ++F  L     V W A++S Y Q G  
Sbjct: 330 HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMA 389

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            +++ +F  M    I  D      IL AS+EL        LH +V+RSGF SNVF G++L
Sbjct: 390 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 449

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPD 476
           +++Y+K GSL DA++ FK M  R++V W+++I+A   +G     L+ F+ MV+ S  +P+
Sbjct: 450 IELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPN 509

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
           +V+ LS+LSACSH GL+EEGL+ F+ M   Y+LRP  EH+  MVD+L R G   +A  ++
Sbjct: 510 NVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDII 569

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
            +MP      +W +++ +CRIH N+E  + AA  LF ++    A  Y+ +SNIYAV G+W
Sbjct: 570 NRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDP-SHAGYYILLSNIYAVDGKW 628

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           ++V++++  ++ERG++K+   S VE++  VH F A+D  HP + +I   +  L  +M KE
Sbjct: 629 DNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKE 688

Query: 657 GYKPDTSCALHD 668
            Y PD    LHD
Sbjct: 689 VYIPDLDFLLHD 700



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 247/490 (50%), Gaps = 9/490 (1%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           Q+H+ + K G          L   Y K   L  AR+VF E P  +   +N+ +  + +E 
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 154 LNEEAIKLF-VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV-ENVFV 211
             EE ++LF + +   G  P +FT   AL A  GL  + LG+ +H F  K + +  ++FV
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            +AL++LYSK   + EA K+F E    D V +  M+T Y  N   +E+L LF   Q    
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFS--QMVMM 199

Query: 272 DRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
           D       TL+SVV   A  L+++ G  +H   I      ++ + NSL+++YAK G  + 
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F+ +     + W+ MI+ Y       EALNLF EM       +  T  S L+A A 
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
             +L  GK++H   +  GF  +    +AL+DMY K     +A+  F+ +P++++VSW AL
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           +S  AQNG A  ++  F +M+  G QPD+V+++ +L+A S  G+ ++ L   +    +  
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL-CLHGYVVRSG 438

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
                   AS++++  + G   +A KL   M    D ++WSS+I +  IH     A +  
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIF 497

Query: 569 DQLFKMEKLR 578
           DQ+ K   +R
Sbjct: 498 DQMVKNSTVR 507



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 190/390 (48%), Gaps = 7/390 (1%)

Query: 92   LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
            L + HA I  +G      I       Y     +D A  VF+++P   S  +N +I GFA 
Sbjct: 736  LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 152  EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            +G    +++L+ +M   G KP  F F  AL +  GL+D+  G+ +H  +V      ++FV
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 212  ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
              AL+D+Y+K   +  AR +F +M   D VS+  MI+ YA N    E+L  F  ++ +  
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 272  DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
              ++    ++L    N   L+ G   H+  I T    ++ VA +++DMY+KCG  + A+ 
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 332  IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
            +F   +    V W+AMI++Y   G+  +A++LF +M +A +     TF  +L A +    
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 392  LSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALI 449
            L  GK     +     ++   S  A ++D+  ++G L +A+   + MP E +   W +L+
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095

Query: 450  SACAQNGDAQATLKSFE-----DMVQSGYQ 474
             AC  + +     K  +     D V +GY 
Sbjct: 1096 GACRIHNNLDLAEKIADHLFHLDPVHAGYH 1125



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 161/676 (23%), Positives = 284/676 (42%), Gaps = 113/676 (16%)

Query: 6    TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            +VST  LI  Y+K      A +LF  +  +  VSW  L+ GY+Q     ++  +F +M +
Sbjct: 343  SVST-ALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS 401

Query: 66   DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
            DG   PD V    +L+  SE     + + +H  +++ G+NS + +  SL++ Y K   L 
Sbjct: 402  DG-IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLG 460

Query: 126  LARRVFKEMPQKD------------------------------------SVSFNALITGF 149
             A ++FK M  +D                                    +V+F ++++  
Sbjct: 461  DAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSAC 520

Query: 150  AKEGLNEEAIKLFVEM----------QHLGF------------KPSDFTFAAALSAGVGL 187
            +  GL EE +K+F  M          +H G             K  D      + AG  +
Sbjct: 521  SHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHV 580

Query: 188  ADIALG--RQVHAFVVKTNFVENVFVANA--------LLDLYS---KHDCVVEAR----- 229
                LG  R  H   +     +N+F  +         L ++Y+   K D V E R     
Sbjct: 581  WGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKE 640

Query: 230  ----KLFGE-MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ----------------- 267
                K+FG+ M EV G  ++ + +   ++   ++  +L R+L+                 
Sbjct: 641  RGLKKMFGQSMVEVRGGVHSFLAS-DRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLH 699

Query: 268  --------FTRFDRSQFPFSTLLSVVANKLD--LQIGRQIHTQTIVTTAISEVKVANSLV 317
                    + R   ++  + T+ S             ++ H +        + ++     
Sbjct: 700  DTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFA 759

Query: 318  DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
             MY    R + A  +F ++ +  +  W  MI  +   G    +L L+ +M    +  D+ 
Sbjct: 760  IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKF 819

Query: 378  TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
             F   L++ A L+ L  GK +H  ++  G  +++F  +AL+DMYAK G ++ A   F +M
Sbjct: 820  AFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKM 879

Query: 438  PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
              R++VSW ++IS  A NG    TL  F+ M  SG  P+ VS+LSVL AC + G + +G 
Sbjct: 880  AVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG- 938

Query: 498  QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            ++F+S   +           +++D+  + G  D A  L  +   + D + WS++I S  I
Sbjct: 939  EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGI 997

Query: 558  HKNLEFAKKAADQLFK 573
            H +   A    DQ+ K
Sbjct: 998  HGHGRKAIDLFDQMVK 1013



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 168/348 (48%), Gaps = 5/348 (1%)

Query: 16   YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
            YV    +  A  +F  + +  +  W ++I G++   +F  + +L+  M  + G  PD   
Sbjct: 762  YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKM-MEKGLKPDKFA 820

Query: 76   FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
            F   L  C+          +H  ++  G ++ L +  +LVD Y K   ++ AR VF +M 
Sbjct: 821  FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880

Query: 136  QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             +D VS+ ++I+G+A  G N E +  F  M+  G  P+  +  + L A   L  +  G  
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 196  VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
             H++V++T F  ++ VA A++D+YSK   +  AR LF E    D V ++ MI  Y  +  
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 256  YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN- 314
             ++++ LF ++       S   F+ +LS  ++   L+ G+ ++ Q +    +   K++N 
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNY 1059

Query: 315  -SLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
              +VD+  + G+  EA ++  N+        W +++ A     NL+ A
Sbjct: 1060 ACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 1107



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 1/172 (0%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+  Y K G++  AR +F+ M  R  VSWT +I GY+      E    F  MR+ G   P
Sbjct: 859  LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG-VIP 917

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            + V+  ++L  C       +    H+ +I+ G+   +++  +++D Y K   LDLAR +F
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             E   KD V ++A+I  +   G   +AI LF +M   G +PS  TF   LSA
Sbjct: 978  DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N      LI  Y K G+L  A +LF  M+ R  V W+ +I  Y    +  EA ++F  
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQV 95
           M  +    P+ VTF ++LS CS      E +++
Sbjct: 500 MVKNSTVRPNNVTFLSILSACSHAGLVEEGLKI 532


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/652 (34%), Positives = 367/652 (56%), Gaps = 33/652 (5%)

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLA 188
           VF ++P   +   N L+   ++    E+ I L+  ++ +  F    F+F + L A   ++
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
               G ++H    K  FV++ F+   L+ +Y+    +++AR LF +M   D V++N++I 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  N  Y ++L+LF +++ +          T+LS   +  +L  GR IH          
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSH----IST----------------------- 341
           +  +  +L++MYA CG  + A++I+  LS     +ST                       
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 342 ----VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
               V W+AMIS Y +    +EAL LF EM +     DQ T  S++ A + + +L+    
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +H++V RSGF   +   +AL+DMYAK G+L  A + F+ MP +N++SW+++I+A A +G+
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           A + +K F  M +   +P+ V+ + VL AC H GL+EEG + F+SM  ++ + P +EHY 
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            MVD+ CR+    +A +L+  MPF P+ I+W S++++C++H   E  + AA +L ++E  
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            D A  V +SNIYA   +W  V  ++K+M  +G+ K  A S +E+ ++VH+F   D  H 
Sbjct: 556 HDGA-LVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHK 614

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEG 697
           Q++EI  K++ ++ ++K  GYKP TS  L D +EE K E + +HSE+LA+ + LI+    
Sbjct: 615 QSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNE 674

Query: 698 SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S I ++KNLR C DCH+ +KL+SK+   EI VRD +RFHH   G CSCRD+W
Sbjct: 675 SCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 226/481 (46%), Gaps = 42/481 (8%)

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           L+ ++R       D  +F +LL   S+    N  +++H    K G+     I   L+  Y
Sbjct: 107 LYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMY 166

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
              R +  AR +F +M   D+V++N +I G+ + G  ++A++LF +M+    KP      
Sbjct: 167 ASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILC 226

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFV-------------------------------E 207
             LSA     +++ GR +H FV    +                                +
Sbjct: 227 TVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK 286

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           ++ V+ A+L  Y+K   V +AR +F +M E D V ++ MI+ YA ++Q +E+LKLF E+ 
Sbjct: 287 HLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEML 346

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
             R    Q    +++S  ++   L     IHT    +     + V N+L+DMYAKCG   
Sbjct: 347 QKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLV 406

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           +A+E+F N+   + + W++MI+A+   GN + A+ LF  M   NI  +  TF  +L A  
Sbjct: 407 KAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG 466

Query: 388 ELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSW 445
               +  G++L S +I   G          ++D+Y ++  L+ AI+  + MP   N++ W
Sbjct: 467 HAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIW 526

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC-------SHCGLIEEGLQ 498
            +L+SAC  +G+A+  L  F        +PD    L VLS         +  GLI + + 
Sbjct: 527 GSLMSACQVHGEAE--LGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMS 584

Query: 499 Y 499
           Y
Sbjct: 585 Y 585



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           VST ML SGY K G +  AR +F+ M++R  V W+ +I GY++ +Q +EA KLF +M   
Sbjct: 290 VSTAML-SGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM-LQ 347

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
             S PD +T  +++S CS      +   +H  + + G+   L + N+L+D Y K   L  
Sbjct: 348 KRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVK 407

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR VF+ MP+K+ +S++++I  FA  G  + AIKLF  M+ +  +P+  TF   L A   
Sbjct: 408 AREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGH 467

Query: 187 LADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
              +  G ++ + ++  + +         ++DLY + + + +A +L   MP
Sbjct: 468 AGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMP 518



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 176/391 (45%), Gaps = 65/391 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M + + V+ NM+I GY ++G                                + +A +LF
Sbjct: 182 MCHPDAVAWNMIIDGYCQNG-------------------------------HYDDALRLF 210

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPD------TANE----------------LIQVHA- 97
            DMR+     PD V   T+LS C          T +E                LI ++A 
Sbjct: 211 EDMRS-SDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYAN 269

Query: 98  ----DIIKFGYNSI----LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
               D+ +  Y+ +    LI+  +++  Y K+  +  AR +F +M ++D V ++A+I+G+
Sbjct: 270 CGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGY 329

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+    +EA+KLF EM      P   T  + +SA   +  +A    +H +V ++ F   +
Sbjct: 330 AESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            V NAL+D+Y+K   +V+AR++F  MP  + +S++ MI  +A +     ++KLFR ++  
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA-NSLVDMYAKCGRFEE 328
             + +   F  +L    +   ++ G ++ +  I    IS  +     +VD+Y +     +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509

Query: 329 AKEIFANLSHISTV-PWTAMISAYVQKGNLE 358
           A E+   +     V  W +++SA    G  E
Sbjct: 510 AIELIETMPFAPNVIIWGSLMSACQVHGEAE 540


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/674 (34%), Positives = 372/674 (55%), Gaps = 37/674 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC--LDLARRVFKEMP 135
           +LL  C    +  +L Q+H+  IK G +S  +  N ++   C      ++ A +VF  +P
Sbjct: 12  SLLEKCK---SMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIP 68

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
                 +N +I G++K    E  + +++ M     KP  FTF  +L        +  G++
Sbjct: 69  HPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKE 128

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +    VK  F  N+FV  A + ++S    V  A K+F      + V++N+M++ Y   +Q
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQ 188

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
           +K S  L                  +LS  +   DL+ G+  H    +   I E      
Sbjct: 189 FKISKMLL-----------------VLSACSKLKDLEWGK--HIFKYINGGIVE------ 223

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
              M+A CG  +EA+ +F N+     V WTAMI  Y++  +   AL LF EM  +N+  D
Sbjct: 224 --HMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPD 281

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + T  SIL A A L +L LG+ + + + ++   ++ F G+AL+DMY K G+++ A + FK
Sbjct: 282 EFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFK 341

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           EM +++  +W  +I   A NG  +  L  F +M+++   PD ++ + VL AC    ++++
Sbjct: 342 EMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDK 397

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G  +F +MT ++ ++P   HY  MVD+L   GC +EA +++  MP +P+ I+W S + +C
Sbjct: 398 GKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGAC 457

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
           R+HKN++ A  AA Q+ ++E   + A YV + NIYA + +WE++ QV+K M ERG++K  
Sbjct: 458 RVHKNVQLADMAAKQILELEP-ENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTP 516

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             S +EL   V+ F A D+ HPQ+ EI  K+EN+MQ + K GY PDTS    D  EE K 
Sbjct: 517 GCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKE 576

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
            +L  HSE+LAIA+ALI++  G  I ++KNLR C DCH   KL+S+   RE+ V+D +RF
Sbjct: 577 TALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRF 636

Query: 736 HHFKDGFCSCRDFW 749
           HHF+ G CSC +FW
Sbjct: 637 HHFRHGSCSCNNFW 650



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 200/444 (45%), Gaps = 34/444 (7%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           +SGN+  A ++F+++   +   W  +I GYS+ +       +++ M T     PD  TF 
Sbjct: 53  ESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTS-NIKPDRFTFP 111

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
             L G +         ++    +K G++S L +  + +  +     +DLA +VF      
Sbjct: 112 FSLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDAC 171

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           + V++N +++G+ +       +K         FK S       LSA   L D+  G+ + 
Sbjct: 172 EVVTWNIMLSGYNR-------VK--------QFKISKMLL--VLSACSKLKDLEWGKHIF 214

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
            + +    VE++F A   +D         EA+ +F  M   D VS+  MI  Y     + 
Sbjct: 215 KY-INGGIVEHMFAACGEMD---------EAQGVFDNMKTRDVVSWTAMIDGYLRMNHFI 264

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
            +L LFRE+Q +     +F   ++L   A    L++G  + T     +  ++  V N+LV
Sbjct: 265 GALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALV 324

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
           DMY KCG   +AK++F  +       WT MI      G+ EEAL +F  M  A+++ D+ 
Sbjct: 325 DMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEI 384

Query: 378 TFASILRASAELASLSLGKQLHS-FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           T+  +L A      +  GK   +   ++ G    V     ++D+    G L++A++    
Sbjct: 385 TYIGVLCACM----VDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVN 440

Query: 437 MPER-NIVSWNALISACAQNGDAQ 459
           MP + N + W + + AC  + + Q
Sbjct: 441 MPVKPNSIVWGSPLGACRVHKNVQ 464



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 1/168 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           +   G +  A+ +F++M  R  VSWT +I GY + N F  A  LF +M+      PD  T
Sbjct: 226 FAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMS-NVKPDEFT 284

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
             ++L  C+          V   I K    +   + N+LVD Y K   +  A++VFKEM 
Sbjct: 285 MVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMY 344

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           QKD  ++  +I G A  G  EEA+ +F  M      P + T+   L A
Sbjct: 345 QKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCA 392



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K GN+  A+++F  M  +   +WT +I G +      EA  +F +M  +   
Sbjct: 321 NALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNM-IEASV 379

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD +T+  +L  C      +    +    ++ G    +     +VD    + CL+ A  
Sbjct: 380 TPDEITYIGVLCACMVDKGKSFFTNM---TMQHGIKPTVTHYGCMVDLLGCVGCLEEALE 436

Query: 130 VFKEMPQK 137
           V   MP K
Sbjct: 437 VIVNMPVK 444


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/676 (32%), Positives = 371/676 (54%), Gaps = 3/676 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YV  G+L   R +F+ +++     W +L+  Y++   +RE+  LF  M+  G    
Sbjct: 98  LVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGD 157

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            Y TF  +L G +      E  +VH  ++K G+ S   + NSL+ +Y K   ++ AR +F
Sbjct: 158 SY-TFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILF 216

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            E+  +D VS+N++I+G    G +   ++ F++M +LG      T    L A   + ++ 
Sbjct: 217 DELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLT 276

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           LGR +HA+ VK  F   V   N LLD+YSK   +  A ++F +M E   VS+  +I  + 
Sbjct: 277 LGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHV 336

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
               + E++ LF E+Q        +  ++++   A    L  GR++H         S + 
Sbjct: 337 REGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLP 396

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V+N+L++MYAKCG  EEA  IF+ L   + V W  MI  Y Q     EAL LF++M +  
Sbjct: 397 VSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQ 455

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  T A +L A A LA+L  G+++H  ++R G+ S++    AL+DMY K G L  A 
Sbjct: 456 LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQ 515

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           Q F  +P+++++ W  +I+    +G  +  + +FE M  +G +P+  S  S+L AC+H G
Sbjct: 516 QLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSG 575

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG + F+SM  +  + PK EHYA MVD+L RSG    A K +  MP +PD  +W ++
Sbjct: 576 LLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGAL 635

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           ++ CRIH ++E A+K A+ +F++E   +   YV ++N+YA A +WE V ++++ + + G+
Sbjct: 636 LSGCRIHHDVELAEKVAEHIFELEP-ENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGL 694

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +     SW+E++ K ++F A D  HPQ   I   +  L  +M + GY      AL + D+
Sbjct: 695 KNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADD 754

Query: 672 EIKVESLKYHSERLAI 687
            +K   L  HSE+LA+
Sbjct: 755 RLKEVLLCAHSEKLAM 770



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/548 (29%), Positives = 270/548 (49%), Gaps = 20/548 (3%)

Query: 30  NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTA 89
           N  VD+ A      I  + +    R A KL    +    S+ +  T+ ++L  C+E  + 
Sbjct: 22  NVTVDKNAK-----ICKFCEMGDLRNAMKLLSRSQR---SELELNTYCSVLQLCAELKSL 73

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDSVSFNALIT 147
            +  +VH+ I   G     ++   LV  Y  + C DL   RR+F  +       +N L++
Sbjct: 74  EDGKRVHSIISSNGMAIDEVLGAKLVFMY--VNCGDLVKGRRIFDGILNDKIFLWNLLMS 131

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
            +AK G   E++ LF +MQ LG +   +TF   L      A +   ++VH +V+K  F  
Sbjct: 132 EYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGS 191

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
              V N+L+  Y K   V  AR LF E+ + D VS+N MI+    N   +  L+ F ++ 
Sbjct: 192 YNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQML 251

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
               D        +L   AN  +L +GR +H   +       V   N+L+DMY+KCG   
Sbjct: 252 NLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLN 311

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
            A E+F  +   + V WT++I+A+V++G   EA+ LF EM    +  D     S++ A A
Sbjct: 312 GANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA 371

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
              SL  G+++H+ + ++   SN+   +AL++MYAK GS+++A   F ++P +NIVSWN 
Sbjct: 372 CSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNT 431

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I   +QN      L+ F DM Q   +PD V++  VL AC+    +E+G +    + +K 
Sbjct: 432 MIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKG 490

Query: 508 KLRPKKEHYA-SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
                  H A ++VD+  + G    A++L   +P + D I+W+ +I    +H    F K+
Sbjct: 491 YFSDL--HVACALVDMYVKCGLLVLAQQLFDMIP-KKDMILWTVMIAGYGMHG---FGKE 544

Query: 567 AADQLFKM 574
           A     KM
Sbjct: 545 AISTFEKM 552



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 233/464 (50%), Gaps = 4/464 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N LI+ Y K G + +AR LF+ + DR  VSW  +I G +     R   + F+ M  + G
Sbjct: 196 VNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQM-LNLG 254

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            D D  T   +L  C+          +HA  +K G++  ++  N+L+D Y K   L+ A 
Sbjct: 255 VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGAN 314

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF +M +   VS+ ++I    +EGL+ EAI LF EMQ  G +P  +   + + A     
Sbjct: 315 EVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSN 374

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GR+VH  + K N   N+ V+NAL+++Y+K   + EA  +F ++P  + VS+N MI 
Sbjct: 375 SLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIG 434

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y+ N    E+L+LF ++Q  +        + +L   A    L+ GR+IH   +     S
Sbjct: 435 GYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFS 493

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ VA +LVDMY KCG    A+++F  +     + WT MI+ Y   G  +EA++ F +M 
Sbjct: 494 DLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMR 553

Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            A I  ++++F SIL A      L  G K   S          +   + ++D+  +SG+L
Sbjct: 554 VAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNL 613

Query: 428 KDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ 470
             A +  + MP + +   W AL+S C  + D +   K  E + +
Sbjct: 614 SRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE 657



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 2/179 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   +N L++ Y K G++  A  +F+ +  +  VSW  +IGGYSQ +   EA +LF+DM+
Sbjct: 394 NLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ 453

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
                 PD VT A +L  C+      +  ++H  I++ GY S L +  +LVD Y K   L
Sbjct: 454 KQ--LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLL 511

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            LA+++F  +P+KD + +  +I G+   G  +EAI  F +M+  G +P + +F + L A
Sbjct: 512 VLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYA 570


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/537 (39%), Positives = 323/537 (60%), Gaps = 1/537 (0%)

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           N L+  Y K+  +  ARKLF EMP  +  ++N M+     +   +ESL  F  ++     
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             ++   +L    A   D+  GRQ+H   + +    ++ V +SL  MY +CG   + +  
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
              L  ++ V     IS   Q G+ E AL  F  M  A + A+  TF S + + ++LA+L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
           + G+Q+H+  I++G    V   ++L+ MY++ G L D+ +   E    ++V  +A+ISA 
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
             +G  Q  +  F+ M+ +G +P+ V+ L++L ACSH GL +EG+  F  MT+ Y L+P 
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
            +HY  +VD+L RSGC +EAE L+  MP +PD ++W +++++C+  K  + A++ A+++ 
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVI 363

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
           +++   D+A YV +SNI A + +WE VS+V++ MRE+ VRK    SWVELK ++H F   
Sbjct: 364 ELDP-HDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 422

Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI 692
           DE H +  EI   +E +M  +++ GY PD S   HD ++E K  SL +HSE+LAIAFA +
Sbjct: 423 DESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 482

Query: 693 NTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           + PEG PI VMKNLR C DCH AIKL+SK+ GREI VRD SRFHHFKDG CSC D+W
Sbjct: 483 SLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 2/343 (0%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           N L+  Y K   L+ AR++F EMP ++  ++NA++ G    GLNEE++  F  M+  G +
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P ++   +      GL D+  GRQVHA+VV++    ++ V ++L  +Y +   + +    
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
              +P ++ VS N  I+    N   + +L+ F  ++    + +   F + ++  ++   L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
             G+QIH   I T     V V  SLV MY++CG   +++ +    S    V  +AMISAY
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSN 410
              G+ ++A+ LF +M  A    ++ TF ++L A +       G      + ++ G   +
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           V   + ++D+  +SG L +A      MP + + V W  L+SAC
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC 346



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 3/346 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +S N+LI GYVK+G+L TAR+LF+ M  R   +W  ++ G +      E+   F  MR +
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           G   PD     +L   C+         QVHA +++ G +  + + +SL   Y +   L  
Sbjct: 61  G-MQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRD 119

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
                + +P  + VS N  I+G  + G  E A++ F  M+  G + +  TF +A+++   
Sbjct: 120 GEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 179

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           LA +A G+Q+HA  +KT   + V V  +L+ +YS+  C+ ++ ++  E    D V  + M
Sbjct: 180 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 239

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ Y ++   ++++ LF+++     + ++  F TLL   ++      G         T  
Sbjct: 240 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 299

Query: 307 IS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
           +   VK    +VD+  + G   EA+++  ++      V W  ++SA
Sbjct: 300 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 37/270 (13%)

Query: 344 WTAMISAYVQKGNL-------------------------------EEALNLFIEMCRANI 372
           W  +I  YV+ G+L                               EE+L  F  M R  +
Sbjct: 3   WNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D+    S+ R  A L  +  G+Q+H++V+RSG   ++  GS+L  MY + G L+D   
Sbjct: 63  QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
             + +P  NIVS N  IS   QNGDA+  L+ F  M  +G + ++V+ +S +++CS    
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + +G Q  +++  K  +        S+V +  R GC  ++E++  +     D ++ S++I
Sbjct: 183 LAQG-QQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYS-GTDLVLCSAMI 240

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           ++   H +    +KA   LFK      A P
Sbjct: 241 SAYGFHGH---GQKAVG-LFKQMMAAGAEP 266


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/622 (36%), Positives = 358/622 (57%), Gaps = 5/622 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           NQ  VS+  LIS Y K   +  AR LF+ M +R  VSW  +I GYSQ+    EA  LF  
Sbjct: 74  NQLFVSSG-LISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCS 132

Query: 63  MRTDGGSDPDYV---TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           M     +    V   T AT+L  C     +     VH   +K G++S L +  S V  YC
Sbjct: 133 MINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYC 192

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   LD+A   F ++  KD V++N +ITG+A+    EEAI+LF +M+  GFKP+D TF  
Sbjct: 193 KCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCC 252

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L A   ++D A+GR  HA V+K     +VFVA AL+D+YSK   + +  + FGEM + +
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRN 312

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            VS+N +IT Y+   +Y+E+L+++ +LQ    +   F F  L S  +    +  G Q+H 
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
            ++     S+V V NS+V+ Y+KCG  + A E F +++  ++V W  +IS + Q G  E+
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEK 432

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL  F +M +     D+ + +S+++A +  A++  G+ LH+ V++SG    ++ GSA++D
Sbjct: 433 ALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVID 492

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+K G ++DA + F  MPE+N+VSWN++I+  AQNG  +  L  F++M  SG  P +V+
Sbjct: 493 MYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVT 552

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            + +L ACSH GL+EEG  ++N M   Y + P  EH   MVD+L R+G  +EAE  +   
Sbjct: 553 FVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSS 612

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
            F  +  +W S++++C +HKN +   +AA     +E    ++ Y A+SNIYA    W  V
Sbjct: 613 SFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEP-HYSSSYTALSNIYASKELWSEV 671

Query: 600 SQVKKAMRERGVRKVTAYSWVE 621
           S+++  M++ GV K    SW+E
Sbjct: 672 SRIRDLMKDMGVEKEPGCSWIE 693



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 275/526 (52%), Gaps = 7/526 (1%)

Query: 32  MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M++   V WT  I   +++    +A   F+ M    G +P+ +T++  +S C++    + 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQM-LRAGIEPNAITYSATISACAQSTRPSL 59

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
              +H  I+K G+++ L + + L+  Y K   +  AR +F +MP++D VS+N++I G+++
Sbjct: 60  ATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQ 119

Query: 152 EGLNEEAIKLFVEM----QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
            GLNEEA  LF  M    ++     SDFT A  L A  GL    +G+ VH + VK  F  
Sbjct: 120 RGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           ++FV+ + + +Y K   +  A   F ++   D V++N MIT YA N   +E+++LF +++
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
              F  +   F  +L       D  +GR  H + +      +V VA +LVDMY+K    E
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299

Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
           + +  F  +S  + V + A+I+ Y   G  EEAL ++ ++    +  D  TF  +  + +
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359

Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
             ++++ G Q+H   ++ G  S+V  G+++++ Y+K G    A++ F+ +   N V W  
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +IS  AQNG+ +  L  F  M +   + D  S  SV+ A S    +E+G ++ ++   K 
Sbjct: 420 IISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQG-RHLHAHVMKS 478

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
            L       ++++D+  + G  ++A+K+ + MP E + + W+S+I 
Sbjct: 479 GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMIT 523



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 240/472 (50%), Gaps = 9/472 (1%)

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           M + + V + + IT  A+ GL ++A+  F++M   G +P+  T++A +SA       +L 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
             +H  ++K  F   +FV++ L+ +YSKHD + EAR LF +MPE D VS+N MI  Y+  
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 254 EQYKESLKLFREL----QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              +E+  LF  +    +  +   S F  +T+L         +IG+ +H   +     S+
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+ S V MY KCG  + A   F  + +   V W  MI+ Y Q    EEA+ LF +M  
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                +  TF  +L+AS  ++  ++G+  H+ V++ G   +VF  +AL+DMY+K   ++D
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
             + F EM +RN+VS+NALI+  +  G  +  L+ +  +   G +PDS + + + S+CS 
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              + EG Q  +  + K+ L        S+V+   + G  D A +    +   P+ + W+
Sbjct: 361 SSTVAEGAQ-VHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWA 418

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            +I+     +N E  +KA  Q  KM K  D     + S++      W +V Q
Sbjct: 419 GIISG--FAQNGE-GEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQ 467


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/645 (34%), Positives = 363/645 (56%), Gaps = 49/645 (7%)

Query: 106 SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVE 164
           S ++  N  + S+ +   L+ AR VF++M  + +V++N +++G+ K  G  +EA +LF +
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           +     +P   ++                                   N +L  Y +   
Sbjct: 131 IP----EPDSVSY-----------------------------------NIMLVCYLRSYG 151

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           V  A   F +MP  D  S+N +I+ +A N Q +++  LF  +     +++   +S ++S 
Sbjct: 152 VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISG 207

Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
                DL+   +++        +  V V  +++  Y K G+ E A+ IF  ++  + V W
Sbjct: 208 YVEHGDLEAAEELYKNV----GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            +MI+ YV+    E+ L +F  M  + +  +  + +S+L   + L++L LG+Q+H  V +
Sbjct: 264 NSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSK 323

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           S    +  + ++L+ MY K G L  A + F EMP +++++WNA+IS  AQ+G  +  L  
Sbjct: 324 SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHL 383

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F+ M     +PD ++ ++V+ AC+H G ++ G+QYF SM +++ +  K  HY  ++D+L 
Sbjct: 384 FDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLG 443

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 584
           R+G  DEA  L+ +MPF P   ++ +++ +CRIHKNL+ A+ AA  L  ++    A  YV
Sbjct: 444 RAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDP-TSATGYV 502

Query: 585 AMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRR 644
            ++NIYA   +W+ V++V+K M+E  V K+  YSW+E+KS  H F ++D LHP+   I +
Sbjct: 503 QLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHK 562

Query: 645 KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           K+  L  +MK  GY PD   ALHD +EE K + L +HSE+LAIAF L+ T  G+PI V K
Sbjct: 563 KLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFK 622

Query: 705 NLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           NLR C DCH AIK IS I  REI VRD++RFHHF++GFCSC D+W
Sbjct: 623 NLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 216/452 (47%), Gaps = 53/452 (11%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-KNQFREAFKLFVDM 63
           + VS N  I+ +V++ +L +AR +F  M  RT V+W  ++ GY++   + +EA +LF   
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF--- 128

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
             D   +PD V++                             +I+++C      Y +   
Sbjct: 129 --DKIPEPDSVSY-----------------------------NIMLVC------YLRSYG 151

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A   F +MP KD  S+N LI+GFA+ G  ++A  LF  M     + +  +++A +S 
Sbjct: 152 VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSWSAMISG 207

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
            V   D+    +++    K   +++V V  A+L  Y K   V  A ++F  M   + V++
Sbjct: 208 YVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  Y  N + ++ LK+F+ +  +R   +    S++L   +N   L +GRQ+H Q + 
Sbjct: 264 NSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH-QLVS 322

Query: 304 TTAISEVKVA-NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            + +S+   A  SL+ MY KCG  + A ++F  +     + W AMIS Y Q G   +AL+
Sbjct: 323 KSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALH 382

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMY 421
           LF +M    +  D  TF +++ A      + LG Q   S     G  +     + ++D+ 
Sbjct: 383 LFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLL 442

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++G L +A+   KEMP   +   +  L+ AC
Sbjct: 443 GRAGRLDEAVSLIKEMPFTPHAAIYGTLLGAC 474



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 186/382 (48%), Gaps = 26/382 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  ++VS N+++  Y++S  +  A   FN M  +   SW  LI G++Q  Q ++AF LF
Sbjct: 131 IPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLF 190

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M    G     V+++ ++SG  E        +++ ++   G  S+ ++  +++  Y K
Sbjct: 191 SVMPEKNG-----VSWSAMISGYVEHGDLEAAEELYKNV---GMKSV-VVETAMLTGYMK 241

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++LA R+F+ M  K+ V++N++I G+ +    E+ +K+F  M     +P+  + ++ 
Sbjct: 242 FGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSV 301

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L     L+ + LGRQ+H  V K+   ++     +L+ +Y K   +  A KLF EMP  D 
Sbjct: 302 LLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDV 361

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +++N MI+ YA +   +++L LF +++          F  ++    +   + +G Q    
Sbjct: 362 ITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKS 421

Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                 I    V  + ++D+  + GR +EA      +S I  +P+T   + Y   G L  
Sbjct: 422 MKKEFGIEAKPVHYTCVIDLLGRAGRLDEA------VSLIKEMPFTPHAAIY---GTLLG 472

Query: 360 ALNLFIEMCRANISADQATFAS 381
           A       CR + + D A FA+
Sbjct: 473 A-------CRIHKNLDLAEFAA 487



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 148/356 (41%), Gaps = 86/356 (24%)

Query: 295 RQIH-------TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
           R+IH       T  +     S+V   N  +  + +    E A+ +F  +S  +TV W  M
Sbjct: 51  RRIHLVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTM 110

Query: 348 ISAYVQ-KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           +S Y +  G ++EA  LF ++   +  +        LR+    A+L+   ++        
Sbjct: 111 LSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMP------- 163

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT----- 461
            + ++ S + L+  +A++G ++ A   F  MPE+N VSW+A+IS   ++GD +A      
Sbjct: 164 -VKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYK 222

Query: 462 ---LKS--FEDMVQSGYQ-----------------PDSVSLLSVLSACSHCGLIEEGLQY 499
              +KS   E  + +GY                   + V+  S+++        E+GL+ 
Sbjct: 223 NVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKV 282

Query: 500 FNSMTQKYKLRP---------------------KKEHY--------------ASMVDILC 524
           F +M +  ++RP                     ++ H                S++ + C
Sbjct: 283 FKTMIES-RVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           + G  D A KL  +MP   D I W+++I+    H     A + A  LF  +K+R+ 
Sbjct: 342 KCGDLDSAWKLFLEMP-RKDVITWNAMISGYAQHG----AGRKALHLF--DKMRNG 390


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/590 (36%), Positives = 344/590 (58%), Gaps = 34/590 (5%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
            +++HA +VK+   +   + N LLD Y K + + +A  LF EMP+ D VS+  ++T Y  
Sbjct: 21  AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80

Query: 253 NEQYKESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +   ++L +F  +  T R     F ++TLL   A+   L++G+Q+H + +++  + +  
Sbjct: 81  AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV 140

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF------- 364
           V +SLVDMYAKCG    A+ +F ++   ++V WTAM+S Y + G  +EA+ LF       
Sbjct: 141 VKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRN 200

Query: 365 ------------------------IEMCRANIS-ADQATFASILRASAELASLSLGKQLH 399
                                   IEM R  +   D    +S++ A A LA L LGKQ+H
Sbjct: 201 LYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIH 260

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
             VI SG+ S +F  +AL+DMYAK   +  A   F  M  R++VSW ++I   AQ+G A+
Sbjct: 261 GLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAK 320

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             L  ++ MV +  +P+ V+ + ++ ACSH GL+ +G + F +M + Y++ P  + +   
Sbjct: 321 EALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCF 380

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           +D+L RSG  +EAE L+  MP +PDE  W++++++C+ H N E   + AD+L  +  + +
Sbjct: 381 LDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLN-MHE 439

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
            + YV +SN+YA AG+WE +S+V+K M +  V++   YS ++L  +  VF A +  HP  
Sbjct: 440 PSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMK 499

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
           +EI   ++ L  EM+K GY PDTS  LHD +E+ K   L +HSER A+A+ L+    G+ 
Sbjct: 500 DEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTV 559

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I ++KNLR C DCH  +KL S I  +EI VRD++R+HHFKDG CSC DFW
Sbjct: 560 IRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 219/448 (48%), Gaps = 39/448 (8%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P Y+    L +    P  A    ++HA I+K G N    + N+L+D+Y K   L  A  +
Sbjct: 3   PSYLHRLKLCTKHQAPLNAK---KIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYL 59

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLAD 189
           F EMPQ+D VS+ +++T + +  L  + + +F  M      +P  F +A  L A   L  
Sbjct: 60  FDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCS 119

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+QVHA  V + FV++  V ++L+D+Y+K      AR +F  +     VS+  M++ 
Sbjct: 120 LRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSG 179

Query: 250 YAWNEQYKESLKLF-----REL---------------------QFTRFDR------SQFP 277
           YA +    E+++LF     R L                      F    R          
Sbjct: 180 YARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLV 239

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
            S+++   AN   L +G+QIH   I +   S + ++N+LVDMYAKC     A+ +F  + 
Sbjct: 240 LSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRML 299

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
           H   V WT++I    Q G  +EAL+L+ +M  A I  ++ TF  ++ A +    +S G++
Sbjct: 300 HRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRK 359

Query: 398 LHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
           L   +I    +S      +  LD+ ++SG L +A    K MP + +  +W AL+SAC  +
Sbjct: 360 LFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHH 419

Query: 456 GDAQATLKSFEDMVQ-SGYQPDSVSLLS 482
           G+ +  ++  + ++  + ++P +  LLS
Sbjct: 420 GNTEMGVRIADRLLSLNMHEPSTYVLLS 447



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 184/395 (46%), Gaps = 34/395 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           NQ     N L+  Y K   L  A  LF+ M  R  VSW  ++  Y+Q     +   +F  
Sbjct: 34  NQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHY 93

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M T     PD+  +ATLL  C+   +     QVHA  +   +    ++ +SLVD Y K  
Sbjct: 94  MFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCG 153

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKL--------------------- 161
              +AR VF  +  K SVS+ A+++G+A+ GL +EA++L                     
Sbjct: 154 LPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQ 213

Query: 162 ----------FVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                     F+EM+  G    D    ++ + A   LA + LG+Q+H  V+ + +   +F
Sbjct: 214 SGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLF 273

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           ++NAL+D+Y+K   ++ AR +F  M   D VS+  +I   A + + KE+L L+ ++    
Sbjct: 274 ISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAE 333

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEA 329
              ++  F  L+   ++   +  GR++    I    IS  +++    +D+ ++ G   EA
Sbjct: 334 IKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEA 393

Query: 330 KEIFANLSHISTVP-WTAMISAYVQKGNLEEALNL 363
           +++   + H    P W A++SA    GN E  + +
Sbjct: 394 EDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRI 428


>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
 gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
 gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 610

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/589 (37%), Positives = 342/589 (58%), Gaps = 34/589 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +HA ++K     +     AL+  Y+K   + +A  LF E P  D   Y+ ++T  + +
Sbjct: 23  RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 82

Query: 254 EQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + +L + R  L         F  S++ SV A     ++GRQ+H   +V+    +  V
Sbjct: 83  ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVV 142

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-------- 364
            +SLVDMY KCG  ++ +++F ++S  ++V WTA++S Y   G  EEAL LF        
Sbjct: 143 KSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNL 202

Query: 365 -----------------------IEMCRANISADQATFASI-LRASAELASLSLGKQLHS 400
                                  +EM R  +  D A   SI +  SA+LA+  LG+QLH 
Sbjct: 203 FAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHG 262

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             +R GF+SN+  G+AL+DMY+K   +  A + F+ +  R+++SW  ++   AQ+G A+ 
Sbjct: 263 STMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEE 322

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  ++ MV +G +P+ V+ + ++ ACSH GL+++G Q F SM  +Y + P+ +HY   +
Sbjct: 323 ALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYL 382

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG   EAE+LM  MP+EPDE  W +++++C  +K+ E   + +D+L ++ + +D+
Sbjct: 383 DLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLEL-RPKDS 441

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           + Y+ +SN+YAV G+W+SV++V+K M    +RK   YSW+E   +  +F A +       
Sbjct: 442 STYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVRE 501

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E ++ EM+K GY PDTS  +HD +E  K   L  HSERLA+AF LI +P GS I
Sbjct: 502 EIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVI 561

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V+KNLR C DCH  +KLIS+IT R+I VRDSSRFHHF+ G CSC +FW
Sbjct: 562 RVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 610



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 43/415 (10%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA I+K G         +LV +Y K R L  A  +F E P++D   +++L+T  +    
Sbjct: 25  MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 84

Query: 155 NEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
            E A+ +   M       P  F  ++  S    L    LGRQ+HA  V + +  +  V +
Sbjct: 85  PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 144

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+D+Y K     + RK+F  M   + V +  +++ YA N + +E+L+LFR +      R
Sbjct: 145 SLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMP----GR 200

Query: 274 SQFPFSTLLS---------------------------------VVANKLDLQ---IGRQI 297
           + F ++ L+S                                 V+    DL    +GRQ+
Sbjct: 201 NLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQL 260

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H  T+    +S + V N+L+DMY+KC     A+E+F  ++    + WT M+    Q G  
Sbjct: 261 HGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRA 320

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSA 416
           EEAL L+  M  A    ++ TF  ++ A +    +  G+QL  S     G    +   + 
Sbjct: 321 EEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTC 380

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            LD+ ++SG L +A +    MP E +  +W AL+SAC +  DA+  ++  + +++
Sbjct: 381 YLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLE 435



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 34/386 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y KS  L  A  LF+    R    ++ L+   S       A  +   M +     P
Sbjct: 44  LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 103

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+   +++ S  +   +     Q+HA  +   YN   ++ +SLVD YCK    D  R+VF
Sbjct: 104 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 163

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEE-------------------------------AIK 160
             M  K+SV + AL++G+A  G +EE                               A++
Sbjct: 164 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 223

Query: 161 LFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           LFVEM+  G +  D F  +  +     LA   LGRQ+H   ++  F+ N+ V NAL+D+Y
Sbjct: 224 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 283

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   ++ AR++F  +   D +S+  M+   A + + +E+L L+  +       ++  F 
Sbjct: 284 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 343

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            L+   ++   +Q GRQ+         I+  ++     +D+ ++ G   EA+E+   + +
Sbjct: 344 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 403

Query: 339 -ISTVPWTAMISAYVQKGNLEEALNL 363
                 W A++SA  +  + E  + +
Sbjct: 404 EPDEATWGALLSACTKYKDAEMCIRI 429



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 2/250 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N+V    L+SGY  +G    A +LF SM  R   +WT LI G     +   A +LF
Sbjct: 166 MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELF 225

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V+MR DG    D    + ++ G ++        Q+H   ++ G+ S +I+ N+L+D Y K
Sbjct: 226 VEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK 285

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF+ +  +D +S+  ++ G A+ G  EEA+ L+  M   G KP++ TF   
Sbjct: 286 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 345

Query: 181 LSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EV 238
           + A      +  GRQ+  +   +      +      LDL S+   ++EA +L   MP E 
Sbjct: 346 IYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEP 405

Query: 239 DGVSYNVMIT 248
           D  ++  +++
Sbjct: 406 DEATWGALLS 415


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/660 (34%), Positives = 380/660 (57%), Gaps = 5/660 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+      LI  Y K   +  AR LF+ +  +T+ +WT +I GYS++ + + + KLF  M
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + +G   PD    +++LS C          Q+H  +++ G    + + N  +D Y K   
Sbjct: 234 K-EGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHK 292

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           + L R++F  M  K+ VS+  +I G  +   + +A+ LFVEM  +G+ P  F   + L++
Sbjct: 293 VQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +  GRQVHA+ +K N   + FV N L+D+Y+K D + +ARK+F  M  +D VSY
Sbjct: 353 CGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSY 412

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  Y+  ++  E+L LFRE++ +    +   F +LL V A+   L++  QIH   I+
Sbjct: 413 NAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHG-LII 471

Query: 304 TTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
              +S  + A S L+D+Y+KC R  +A+ +F  +     V WTAM S Y Q+   EE+L 
Sbjct: 472 KYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLK 531

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L+  +  + +  ++ TFA+++ A++ +ASL  G+Q H+ VI+ GF  + F  + L+DMYA
Sbjct: 532 LYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYA 591

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           KSGS+++A + F     ++   WN++I+  AQ+G+A+  L+ FEDM+  G +P+ V+ + 
Sbjct: 592 KSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVG 651

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH GL++ G  +F+SM+Q + + P  EHY  MV +L R+G   EA++ + +MP +
Sbjct: 652 VLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIK 710

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
              ++W S++++CR+  N+E    AA+         D+  YV +SNI+A  G W +V ++
Sbjct: 711 QAAVVWRSLLSACRVSGNVELGTYAAEMAISCNP-ADSGSYVLLSNIFASKGMWVNVRRL 769

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           ++ M   GV K    SW+E+ +++H F A D  H  +  I   ++NL+ ++K  GY  +T
Sbjct: 770 REKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANT 829



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/572 (29%), Positives = 303/572 (52%), Gaps = 7/572 (1%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N L+  Y K   +  A +LF++M  +  V+W+ ++  Y+  +   EA  LFV       
Sbjct: 77  VNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCN 136

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+    A+++  C++    N  +Q+H  ++K GY   + +C SL+D Y K  C+D AR
Sbjct: 137 EKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDAR 196

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F  +  K S ++  +I G++K+G ++ ++KLF +M+     P  +  ++ LSA + L 
Sbjct: 197 LLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLK 256

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  G+Q+H +V+++  V +V + N  +D Y K   V   RKLF  M + + VS+  +I 
Sbjct: 257 FLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIA 316

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N  ++++L LF E+    ++   F  +++L+   + + L+ GRQ+H   I     +
Sbjct: 317 GCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDN 376

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V N L+DMYAKC    +A+++F  ++ I  V + AMI  Y ++  L EAL+LF EM 
Sbjct: 377 DDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMR 436

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
            +  S     F S+L  SA L  L L  Q+H  +I+ G   + F+GSAL+D+Y+K   + 
Sbjct: 437 LSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVG 496

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F+E+ +++IV W A+ S   Q  + + +LK ++ +  S  +P+  +  +V++A S
Sbjct: 497 DARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAAS 556

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           +   +  G Q+ N   Q  K+    + +   ++VD+  +SG  +EA K      ++ D  
Sbjct: 557 NIASLRHGQQFHN---QVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK-DTA 612

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
            W+S+I +   H   E A +  + +  ME L+
Sbjct: 613 CWNSMIATYAQHGEAEKALQVFEDMI-MEGLK 643



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 268/526 (50%), Gaps = 26/526 (4%)

Query: 94  QVHADIIKFGYNSI-LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           ++H+ I+ FG++   + + N+L+ +Y K+  ++ A ++F  M  K+ V+++++++ +   
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118

Query: 153 GLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               EA+ LFV+ M+    KP+++  A+ + A      +    Q+H  VVK  +V++V+V
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             +L+D Y+KH C+ +AR LF  +      ++  +I  Y+   + + SLKLF +++    
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
              ++  S++LS       L+ G+QIH   + +  + +V + N  +D Y KC + +  ++
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  +   + V WT +I+  +Q     +AL+LF+EM R   + D     S+L +   L +
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           L  G+Q+H++ I+    ++ F  + L+DMYAK  SL DA + F  M   ++VS+NA+I  
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDS---VSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
            ++       L  F +M  S   P     VSLL V ++  H  L  +     + +  KY 
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ----IHGLIIKYG 474

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN----------SCRIH 558
           +   +   ++++D+  +     +A  +  ++  + D ++W+++ +          S +++
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ-DKDIVVWTAMFSGYTQQSENEESLKLY 533

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
           K L+ ++       K  +   AA   A SNI ++    +  +QV K
Sbjct: 534 KCLQMSR------LKPNEFTFAAVITAASNIASLRHGQQFHNQVIK 573



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 6/313 (1%)

Query: 190 IALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           I   +++H+ +V   F + ++F+ N LL  YSK + V  A KLF  M   + V+++ M++
Sbjct: 54  IPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVS 113

Query: 249 CYAWNEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            Y  +    E+L LF  +QF R      +++  ++++        L    QIH   +   
Sbjct: 114 MYTHHSHCLEALMLF--VQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGG 171

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            + +V V  SL+D Y K    ++A+ +F  L   ++  WT +I+ Y ++G  + +L LF 
Sbjct: 172 YVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFD 231

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +M   ++  D+   +S+L A   L  L  GKQ+H +V+RSG + +V   +  +D Y K  
Sbjct: 232 QMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCH 291

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            ++   + F  M ++N+VSW  +I+ C QN   +  L  F +M + G+ PD+    SVL+
Sbjct: 292 KVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLN 351

Query: 486 ACSHCGLIEEGLQ 498
           +C     +E+G Q
Sbjct: 352 SCGSLVALEKGRQ 364



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 48/330 (14%)

Query: 295 RQIHTQTIVTT-AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
           ++IH++ +V      ++ + N+L+  Y+K      A ++F  +SH + V W++M+S Y  
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 354 KGNLEEALNLFIEMCRA-NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
             +  EAL LF++  R+ N   ++   AS++RA  +   L+   Q+H  V++ G++ +V+
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
             ++L+D Y K   + DA   F  +  +   +W  +I+  ++ G +Q +LK F+ M +  
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237

Query: 473 YQPDSVSLLSVLSAC-----------SHCGLIEEGLQYFNSMTQKY--------KLRPKK 513
             PD   L SVLSAC            HC ++  G+    SM   +        K++  +
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297

Query: 514 EHYASMVD------ILCRSGCFD-----EAEKL---MAQMPFEPDEIMWSSVINSCRIHK 559
           + +  MVD          +GC       +A  L   MA+M + PD    +SV+NSC    
Sbjct: 298 KLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC---- 353

Query: 560 NLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
                      L  +EK R    Y    NI
Sbjct: 354 ---------GSLVALEKGRQVHAYAIKVNI 374


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/681 (33%), Positives = 384/681 (56%), Gaps = 8/681 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V+   L+  Y     L  A  +F  M +R +V W+ +I GY + ++F E  KL+  
Sbjct: 202 DSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKV 261

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCK 120
           M  D G      TFA+    C+         Q+HA  +K  FGY++I  +  + +D Y K
Sbjct: 262 M-LDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI--VGTATLDMYAK 318

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR+VF   P     S NALI G+A++    EA+++F  +Q       + + + A
Sbjct: 319 CDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGA 378

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   +     G Q+H   VK     N+ VAN +LD+Y+K   ++EA  +F +M   D 
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDA 438

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  +  NE  +E+L LF  +  +  +   + F +++   A K  L  G ++H +
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +    +  V ++++DMY KCG   EA++I   L   +TV W ++IS +  +   E A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L+ F  M +  +  D  T+A++L   A LA++ LGKQ+H  +++    S+V+  S ++DM
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K G+++D+   F++ P+R+ V+W+A+I A A +G  +  +K FE+M     +P+    
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +SVL AC+H G +++GL YF  M   Y L P+ EHY+ MVD+L RSG  +EA +L+  MP
Sbjct: 679 ISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMP 738

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FE D+++W +++  CR+  N+E A+KAA+ L +++  +D++ YV +SN+YA+AG W  V+
Sbjct: 739 FEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDP-QDSSAYVLLSNVYAIAGMWGEVA 797

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  M+   ++K    SW++++ +VH F   D+ HP++ EI ++   L+ EMK +GY P
Sbjct: 798 KIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVP 857

Query: 661 DTSCALHDE--DEEIKVESLK 679
           +    L DE  DE+   E  K
Sbjct: 858 EIDGFLLDEEVDEQDSYEGHK 878



 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 317/584 (54%), Gaps = 11/584 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +S N +I GY   GN+  A+ LF+SM +R  VSW  ++  Y Q    R++ ++F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR       DY TFA +L  C+  +     +QVH   I+ G++S ++   +LVD Y  
Sbjct: 159 TKMRLLE-IQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD A  +F EMP+++SV ++A+I G+ +     E +KL+  M   G   S  TFA+A
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +  GL+   LG Q+HA+ +KTNF  +  V  A LD+Y+K D +V+ARK+F   P    
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            S+N +I  YA  +Q  E+L++FR LQ +  D  +   S  L+  +       G Q+H  
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +       + VAN+++DMYAKCG   EA  IF ++     V W A+I+A+ Q  ++EE 
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L LF+ M R+ +  D  TF S+++A A   +L+ G ++H  VI+SG   + F GSA++DM
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G L +A +  + + ER  VSWN++IS  +     +  L  F  M+Q G  PD+ + 
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCRSGCFDEAEKLMAQ 538
            +VL  C++   +E G Q      Q  KL+   + Y  +++VD+  + G   ++  +  +
Sbjct: 578 ATVLDICANLATVELGKQIHG---QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK 634

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            P + D + WS++I +   H   E A K    LF+  +L++  P
Sbjct: 635 AP-KRDYVTWSAMICAYAYHGLGEDAIK----LFEEMQLQNVKP 673



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 265/549 (48%), Gaps = 33/549 (6%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +TF+ +   CS     N   Q HA I   G+   + + N L+  YCK   L+ A  VF +
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 134 MPQKDSVSFNALITGFA-------------------------------KEGLNEEAIKLF 162
           MPQ+D +S+N +I G+A                               + G + ++I++F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            +M+ L  +    TFA  L A  G+ D  LG QVH   ++  F  +V    AL+D+YS  
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             +  A  +F EMPE + V ++ +I  Y  N+++ E LKL++ +       SQ  F++  
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A     ++G Q+H   + T    +  V  + +DMYAKC R  +A+++F    + +  
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
              A+I  Y ++  + EAL +F  + ++ +  D+ + +  L A + +     G QLH   
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++ G   N+   + +LDMYAK G+L +A   F +M  ++ VSWNA+I+A  QN   + TL
Sbjct: 399 VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++S  +PD  +  SV+ AC+    +  G++    +  K  +       ++++D+
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI-KSGMGLDWFVGSAIIDM 517

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            C+ G   EAEK+  ++  E   + W+S+I+     K  E A     ++ ++  + D   
Sbjct: 518 YCKCGMLVEAEKIHERLE-ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576

Query: 583 YVAMSNIYA 591
           Y  + +I A
Sbjct: 577 YATVLDICA 585



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 215/510 (42%), Gaps = 71/510 (13%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------------- 221
            TF+        L  I  G+Q HA +  T FV  VFV+N LL  Y K             
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98

Query: 222 ---HDCVVE---------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
               D +                 A+ LF  MPE D VS+N M++CY  N  +++S+++F
Sbjct: 99  MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
            +++          F+ +L       D  +G Q+H   I     S+V    +LVDMY+ C
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
            + + A  IF  +   ++V W+A+I+ YV+     E L L+  M    +   QATFAS  
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R+ A L++  LG QLH++ +++ F  +   G+A LDMYAK   + DA + F   P     
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           S NALI   A+       L+ F  + +S    D +SL   L+ACS      EG+Q  + +
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGL 397

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEA-----------------------------EK 534
             K  L        +++D+  + G   EA                             E 
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457

Query: 535 L-----MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
           L     M +   EPD+  + SV+ +C   K L +  +   ++ K     D     A+ ++
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           Y   G      ++ + + ER     T  SW
Sbjct: 518 YCKCGMLVEAEKIHERLEER-----TTVSW 542


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 249/748 (33%), Positives = 397/748 (53%), Gaps = 15/748 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y +  +   A  L + M  R AVSW  +I   +Q   F  +   F  M  DG 
Sbjct: 50  SNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDG- 108

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S PD V F +L+     P T  E   V     K G++   ++  +L+  Y +   LD A+
Sbjct: 109 SVPDAVVFLSLIKA---PGTIQEGEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAK 165

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
             F  + ++  VS+NALIT +++    E+++++F EM   G  P+  T     SA  G+A
Sbjct: 166 DAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIA 225

Query: 189 D--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
                 G  +HA  + +  +    VAN++++L+ +   +  A ++F ++ + D  S+N M
Sbjct: 226 AKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTM 285

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I  +A N    E+L L+  +   R D     F  +L       DL+ G  IH        
Sbjct: 286 IAAFAKNGHVFEALDLYGRMTI-RPD--GVTFVNVLEACDCPDDLERGESIHRDARAHGY 342

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++ VA +LV MY +CGR + A E+FA + H   +   A+I+A+ Q G  + +L  F +
Sbjct: 343 DSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQ 402

Query: 367 MCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGF---MSNVFSGSALLDMYA 422
           M +  I   + T  ++L A A   + +   + LH ++          ++   +AL++MYA
Sbjct: 403 MLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYA 462

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G L  A   F   P+ N+ +WNA+++  AQ+G A   ++   +M  +G  PD +S  +
Sbjct: 463 KCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTA 522

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
            LSA SH   +E+G + F ++++ Y L P  EHY ++VD+L R+G  +EAE  +  M   
Sbjct: 523 ALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIA 582

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D   W +++ +CRIHK+ + A +AA+ +  ++     A Y  +SN+Y+ AG+W+   ++
Sbjct: 583 ADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDP-SHGASYTVLSNVYSAAGRWDEAEEI 641

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK-KEGYKPD 661
           ++ M E G RK    SW+E+K++VH F   D  HP+T EI  +++ L   +K +E Y PD
Sbjct: 642 RRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVPD 701

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
               LHD ++E +   L +HSE+LA+ F LI T EGS I ++KNLR C DCH  +KL SK
Sbjct: 702 VGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTSK 761

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
            T REI VRD  RFHHF  G CSC D W
Sbjct: 762 NTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 194/394 (49%), Gaps = 10/394 (2%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H  +I+ GY   L + N L+  Y ++     A  +   MP++++VS+NA+I   A+ G
Sbjct: 33  KIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAG 92

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               ++  F  M   G  P    F + + A      I  G  V  F  K+ F  +  V  
Sbjct: 93  DFPRSLLFFQRMLQDGSVPDAVVFLSLIKAP---GTIQEGEIVQDFAKKSGFDRSFVVGT 149

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+ +Y +   +  A+  F  + E   VS+N +IT Y+  ++ ++SL++FRE+       
Sbjct: 150 ALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAP 209

Query: 274 SQFPFSTLLSVVANKLDLQI---GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           +      + S VA  +  +I   G  IH  +I +  IS   VANS+++++ + G    A 
Sbjct: 210 NAVTIICIASAVAG-IAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRAN 268

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           EIF  +       W  MI+A+ + G++ EAL+L+  M    I  D  TF ++L A     
Sbjct: 269 EIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGVTFVNVLEACDCPD 325

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L  G+ +H      G+ S++   +AL+ MY + G L  A + F  +    +++ NA+I+
Sbjct: 326 DLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIA 385

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           A AQ G A  +L  F  M+Q G +P   +L++VL
Sbjct: 386 AHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 156/307 (50%), Gaps = 10/307 (3%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H  V+++ + +++F++N LL +Y++ +   +A  L   MP  + VS+N +I   A 
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQ 90

Query: 253 NEQYKESLKLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              +  SL  F R LQ    D S       LS++     +Q G  +      +       
Sbjct: 91  AGDFPRSLLFFQRMLQ----DGSVPDAVVFLSLIKAPGTIQEGEIVQDFAKKSGFDRSFV 146

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  +L+ MY +CGR + AK+ F  +     V W A+I+ Y +    E++L +F EM    
Sbjct: 147 VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQG 206

Query: 372 ISADQATFASILRASAELAS--LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           I+ +  T   I  A A +A+   + G  +H+  I SG +S     +++++++ + G++  
Sbjct: 207 IAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISR 266

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+++ +R++ SWN +I+A A+NG     L  +  M     +PD V+ ++VL AC  
Sbjct: 267 ANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGVTFVNVLEACDC 323

Query: 490 CGLIEEG 496
              +E G
Sbjct: 324 PDDLERG 330



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 9/330 (2%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N +I+ + + GN++ A E+F  +  R   SW  +I  +++     EA  L+  M  
Sbjct: 248 TTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTI 307

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                PD VTF  +L  C  PD       +H D    GY+S LI+  +LV  Y +   LD
Sbjct: 308 ----RPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLD 363

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL-SAG 184
            A  VF  +     ++ NA+I   A+ G  + ++  F +M  LG +PS FT  A L +  
Sbjct: 364 RAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACA 423

Query: 185 VGLADIALGRQVHAFVVKTNF---VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
              A  + GR +H ++ +        ++ V NAL+++Y+K   +  AR +F   P+ +  
Sbjct: 424 TSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVS 483

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HTQ 300
           ++N ++  YA +     +++L  E+Q          F+  LS  ++   ++ G +I +  
Sbjct: 484 TWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAI 543

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           +     I  V+   ++VD+  + G  EEA+
Sbjct: 544 SRDYGLIPSVEHYGAVVDLLGRAGWLEEAE 573



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 161/371 (43%), Gaps = 35/371 (9%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           +  L  +V     L  GR+IH + I +     + ++N L+ MYA+     +A+ +   + 
Sbjct: 15  WRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMP 74

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + V W A+I A  Q G+   +L  F  M +     D   F S+++A     ++  G+ 
Sbjct: 75  RRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAP---GTIQEGEI 131

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +  F  +SGF  +   G+AL+ MY + G L  A   F  + ER +VSWNALI+  ++  +
Sbjct: 132 VQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDE 191

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACS-------------HCGLIEEGL------- 497
            + +L+ F +M+  G  P++V+++ + SA +             H   I+ GL       
Sbjct: 192 KEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVA 251

Query: 498 -QYFNSMTQKYKLRPKKE-----------HYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
               N   +   +    E            + +M+    ++G   EA  L  +M   PD 
Sbjct: 252 NSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIRPDG 311

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           + + +V+ +C    +LE  +             D     A+ ++Y   G+ +  ++V  A
Sbjct: 312 VTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAA 371

Query: 606 MRERGVRKVTA 616
           ++  GV  + A
Sbjct: 372 IQHPGVITLNA 382



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 5/175 (2%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           ++  + R   E  SL  G+++H  VI SG+  ++F  + LL MYA+  S +DA      M
Sbjct: 14  SWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM 73

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P RN VSWNA+I A AQ GD   +L  F+ M+Q G  PD+V  LS++ A    G I+EG 
Sbjct: 74  PRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEG- 129

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +      +K           +++ +  R G  D A+    ++  E   + W+++I
Sbjct: 130 EIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ-ERGVVSWNALI 183



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 4/237 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + +    L+S Y + G L  A E+F ++     ++   +I  ++Q  +   +   F  
Sbjct: 343 DSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQ 402

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH---ADIIKFGYNSILIICNSLVDSYC 119
           M   G     +   A L +  +    A+    +H   A+         +++ N+LV+ Y 
Sbjct: 403 MLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYA 462

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   LD AR +F   PQ +  ++NA++ G+A+ G  + A++L  EMQ  G  P   +F A
Sbjct: 463 KCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTA 522

Query: 180 ALSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           ALSA      +  G ++ +A       + +V    A++DL  +   + EA      M
Sbjct: 523 ALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSM 579


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/651 (33%), Positives = 368/651 (56%), Gaps = 8/651 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+++   VK+G+L  AR+LF+ M+ R  +SWT +I GY       EA  LF  M  + G 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D    +  L  C    + +    +H   +K  + + + + ++LVD Y KI  +D    
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VFKEMP ++ VS+ A+I G  + G N+EA+  F +M         +TF++AL A      
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  GR++H   +K  F    FVAN L  +Y+K   +    +LF  M + D VS+  +I  
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
                Q + ++K FR ++ T    ++F F+ ++S  A    ++ G Q+H   I    +  
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + VANS++ MY+KC + + A  +F  LS    + W+ MIS Y Q G  EEA +    M R
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                ++  FAS+L     +A L  GKQLH+ V+  G   N    SAL++MY+K GS+K+
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKE 424

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F E    NIVSW A+I+  A++G +Q  +  F+ + + G +PDSV+ ++VL+ACSH
Sbjct: 425 ASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSH 484

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL++ G  YFNS+++ +++ P K+HY  M+D+LCR+G  ++AE ++  MPF+ D+++WS
Sbjct: 485 AGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWS 544

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CRIH +++  K+AA+++ +++    A  ++ ++N+YA  G+W+  ++V+K M+ +
Sbjct: 545 TLLRACRIHGDVDCGKRAAEKILQLDP-NCAVTHITLANMYAAKGKWKEAAEVRKMMKSK 603

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL-------MQEM 653
           GV K   +SW++ K +V  F + D  HP+   I   ++ L       MQEM
Sbjct: 604 GVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEMHMQEM 654



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 25/156 (16%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QNT+  + LI+ Y K G++  A ++F+       VSWT +I GY++    +EA  LF  +
Sbjct: 404 QNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKL 463

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN------SILIICNS---- 113
               G  PD VTF  +L+ CS           HA ++  G++       +  IC S    
Sbjct: 464 -PKVGLRPDSVTFIAVLAACS-----------HAGLVDLGFHYFNSLSKVHQICPSKDHY 511

Query: 114 --LVDSYCKIRCLDLARRVFKEMP-QKDSVSFNALI 146
             ++D  C+   L+ A  + + MP Q+D V ++ L+
Sbjct: 512 GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/710 (32%), Positives = 393/710 (55%), Gaps = 43/710 (6%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFG-----YNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +LS   +  ++ +L +VHA +++ G     +++  +   S + S+     LD AR +F +
Sbjct: 28  ILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSF---STLDYARNLFDQ 84

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIAL 192
           +PQ +  ++N LI  +A      ++  +F+++       P+ FTF   + A   L    +
Sbjct: 85  IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRV 144

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G  VH   +K +F  ++++ N+L+  Y     +  A +LF  +   D VS+N MI+ +A 
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQ 204

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
               +++L+LF +++      +      +LS  A KLDL+ GR + +         ++ +
Sbjct: 205 GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTL 264

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM------------------------- 347
            N+++DMY KCG  ++A+++F  +       WT M                         
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324

Query: 348 ------ISAYVQKGNLEEALNLFIEMCRANIS-ADQATFASILRASAELASLSLGKQLHS 400
                 ISAY Q G  +EAL +F E+  + I+  D+ T  S L A A+L ++ LG  +H 
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           ++ R G + N    S+L+DMYAK GSL+ A++ F  + ER++  W+A+I+    +G  +A
Sbjct: 385 YIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            +  F +M ++  +P+SV+  +VL ACSH GL++EG  +F+ M   Y + P+ +HYA MV
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMV 504

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           DIL R+G  +EA +L+ +M   P   +W +++ +C +H N+E  + A+DQL K+E  R+ 
Sbjct: 505 DILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEP-RNH 563

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
              V +SNIYA  G+WE VS+++K MR+  ++K    S +E    VH F   D  HP ++
Sbjct: 564 GAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSS 623

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            I  K+E +  ++K  GY+P+ S  L   E++++K ++L  HSE+LAIAF L+      P
Sbjct: 624 NIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQP 683

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I V+KNLR C DCHA  KL+S++  R+I +RD  RFHHF+DG CSC D+W
Sbjct: 684 IRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 225/466 (48%), Gaps = 34/466 (7%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L  AR LF+ +      +W  LI  Y+  +   ++F +F+D+       P+  TF  ++ 
Sbjct: 75  LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             SE   +     VH   IK  +   L I NSLV  Y     L +A R+FK +  KD VS
Sbjct: 135 AASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVS 194

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N++I+ FA+    E+A++LF++M+     P+  T    LSA     D+  GR V +++ 
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 254

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE---------VDG------------ 240
           +     ++ + NA+LD+Y+K   V +A+KLF EMPE         +DG            
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARL 314

Query: 241 ----------VSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKL 289
                      ++NV+I+ Y  N + KE+L +F ELQ ++  +  +    + LS  A   
Sbjct: 315 VFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG 374

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            + +G  IH        +    + +SLVDMYAKCG  E+A E+F ++       W+AMI+
Sbjct: 375 AIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIA 434

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFM 408
                G  + A++LF EM  A +  +  TF ++L A +    +  G+   H      G +
Sbjct: 435 GLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVV 494

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACA 453
             +   + ++D+  ++G L++A++   EM      S W AL+ AC+
Sbjct: 495 PEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACS 540



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 180/386 (46%), Gaps = 41/386 (10%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G+L+ A  LF  +  +  VSW  +I  ++Q N   +A +LF+ M  +   
Sbjct: 165 NSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVM 224

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT   +LS C++         V + I + G    L +CN+++D Y K   +D A++
Sbjct: 225 -PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQK 283

Query: 130 VFKEMPQKDSVSFNALITGFAK-------------------------------EGLNEEA 158
           +F EMP++D  S+  ++ G+AK                                G  +EA
Sbjct: 284 LFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEA 343

Query: 159 IKLFVEMQHLGF-KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
           + +F E+Q     KP + T  + LSA   L  I LG  +H ++ +   V N  + ++L+D
Sbjct: 344 LAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVD 403

Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           +Y+K   + +A ++F  + E D   ++ MI     + + K ++ LF E+Q  +   +   
Sbjct: 404 MYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVT 463

Query: 278 FSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F+ +L   ++   +  GR   H    V   + E+K    +VD+  + G  EEA E+   +
Sbjct: 464 FTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMEL---I 520

Query: 337 SHISTVP----WTAMISAYVQKGNLE 358
           + +ST P    W A++ A     N+E
Sbjct: 521 NEMSTTPSASVWGALLGACSLHMNVE 546



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 144/339 (42%), Gaps = 48/339 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  S  +++ GY K G+   AR +FN+M  +   +W +LI  Y Q  + +EA  +F
Sbjct: 288 MPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +++    + PD VT  + LS C++    +    +H  I + G      + +SLVD Y K
Sbjct: 348 NELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAK 407

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A  VF  + ++D   ++A+I G    G  + AI LF EMQ    KP+  TF   
Sbjct: 408 CGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467

Query: 181 LSA--GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           L A    GL D                                     E R  F EM  V
Sbjct: 468 LCACSHAGLVD-------------------------------------EGRVFFHEMEPV 490

Query: 239 DGV-----SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            GV      Y  M+         +E+++L  E+  T    S   +  LL   +  +++++
Sbjct: 491 YGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTT---PSASVWGALLGACSLHMNVEL 547

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           G     Q +     +   +   L ++YAK GR+E+  E+
Sbjct: 548 GELASDQLLKLEPRNHGAIV-LLSNIYAKTGRWEKVSEL 585


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/609 (37%), Positives = 342/609 (56%), Gaps = 35/609 (5%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N ++  +A  G + EAI L++ MQ +G   ++FT+   L           G  VH  VV+
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           T F  ++FV  AL+D+Y+K   + +A ++F  M   D V +  MIT Y   E+  ++L L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
           FR++Q   F                     +G +I       TAIS       L D    
Sbjct: 221 FRKMQEEGF---------------------LGDEI-------TAISVASAVGQLGDGRMA 252

Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
             R   A+ +F  +   + + W +M+S Y Q G   +AL+LF +M  +    +  T   +
Sbjct: 253 ISR---ARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 309

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK--EMPER 440
           + A + L S  LG++LH+FVI S    +    +A++DMY K G L  A++ F   E+ ER
Sbjct: 310 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 369

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++ SWN LIS    +G  +  L+ F  M   G +P+ ++  S+LSACSH GLI+EG + F
Sbjct: 370 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 429

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
             MT K  +RP+ +HYA MVD+L R+G  +EA +L+ ++P  P + +W +++ +CRIH N
Sbjct: 430 ADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 488

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
            E  + AA+ LF++E       YV MSNIYA + +W+ V  V++ M+ RG++K  A+S +
Sbjct: 489 TELGEIAANNLFQLEP-EHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 547

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           E  ++VH F   D+  P   E+ RK+E+L  EMK  GY PD SC LHD + E K   L Y
Sbjct: 548 EFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNY 607

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSE+LA+AF ++   +G PI V KNLR C+DCH A K IS I GR+I VRD +RFHHF+ 
Sbjct: 608 HSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQG 667

Query: 741 GFCSCRDFW 749
           G CSC D+W
Sbjct: 668 GRCSCGDYW 676



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 205/459 (44%), Gaps = 43/459 (9%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVS--------WTILIGGYSQKNQFREAFKLFVDM 63
           LI  Y K G+L +AR LF+                    ++  Y+   +  EA  L++ M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G    ++ T+  +L  C+    A     VH  +++ G+ S L +  +LVD Y K   
Sbjct: 124 QRMGVGVNNF-TYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGE 182

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  A  VF  M  +D V + A+IT + +     +A+ LF +MQ  GF   + T   A+S 
Sbjct: 183 IGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEIT---AISV 239

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              +  +  GR                              +  AR +F  M E +G+S+
Sbjct: 240 ASAVGQLGDGRMA----------------------------ISRARLVFDRMEERNGISW 271

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N M++ Y  N +  ++L LF ++Q +  D +      ++S  +      +GR++H   I 
Sbjct: 272 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 331

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFAN--LSHISTVPWTAMISAYVQKGNLEEAL 361
           +    +  + N+++DMY KCG  + A E+F N  L       W  +IS Y   G+ +EAL
Sbjct: 332 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 391

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF  M    +  +  TF SIL A +    +  G++  + + +      +   + ++DM 
Sbjct: 392 ELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDML 451

Query: 422 AKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQ 459
            ++G L +A +  K++P R +   W AL+ AC  +G+ +
Sbjct: 452 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 490



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 34/238 (14%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N +S N ++SGY ++G    A  LFN M                   Q  E     
Sbjct: 263 MEERNGISWNSMLSGYTQNGRPTDALSLFNQM-------------------QASEC---- 299

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                    DP+ VT   ++S CS   + +   ++H  +I    +    + N+++D Y K
Sbjct: 300 ---------DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 350

Query: 121 IRCLDLARRVFK--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
              LD A  +F   E+ ++D  S+N LI+G+   G  +EA++LF  MQ  G +P+D TF 
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + LSA      I  GR+  A + K +    +     ++D+  +   + EA +L  ++P
Sbjct: 411 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 468


>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/589 (37%), Positives = 342/589 (58%), Gaps = 34/589 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +HA ++K     +     AL+  Y+K   + +A  LF E P  D   Y+ ++T  + +
Sbjct: 105 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 164

Query: 254 EQYKESLKLFR-ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              + +L + R  L         F  S++ SV A     ++GRQ+H   +V+    +  V
Sbjct: 165 ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVV 224

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-------- 364
            +SLVDMY KCG  ++ +++F ++S  ++V WTA++S Y   G  EEAL LF        
Sbjct: 225 KSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNL 284

Query: 365 -----------------------IEMCRANISADQATFASI-LRASAELASLSLGKQLHS 400
                                  +EM R  +  D A   SI +  SA+LA+  LG+QLH 
Sbjct: 285 FAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHG 344

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             +R GF+SN+  G+AL+DMY+K   +  A + F+ +  R+++SW  ++   AQ+G A+ 
Sbjct: 345 STMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEE 404

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  ++ MV +G +P+ V+ + ++ ACSH GL+++G Q F SM  +Y + P+ +HY   +
Sbjct: 405 ALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYL 464

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG   EAE+LM  MP+EPDE  W +++++C  +K+ E   + +D+L ++ + +D+
Sbjct: 465 DLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLEL-RPKDS 523

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           + Y+ +SN+YAV G+W+SV++V+K M    +RK   YSW+E   +  +F A +       
Sbjct: 524 STYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVRE 583

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E ++ EM+K GY PDTS  +HD +E  K   L  HSERLA+AF LI +P GS I
Sbjct: 584 EIMVFLEEMVLEMRKRGYVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVI 643

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V+KNLR C DCH  +KLIS+IT R+I VRDSSRFHHF+ G CSC +FW
Sbjct: 644 RVVKNLRVCVDCHTVMKLISEITHRKIVVRDSSRFHHFEGGKCSCSEFW 692



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 43/415 (10%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA I+K G         +LV +Y K R L  A  +F E P++D   +++L+T  +    
Sbjct: 107 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 166

Query: 155 NEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
            E A+ +   M       P  F  ++  S    L    LGRQ+HA  V + +  +  V +
Sbjct: 167 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 226

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+D+Y K     + RK+F  M   + V +  +++ YA N + +E+L+LFR +      R
Sbjct: 227 SLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMP----GR 282

Query: 274 SQFPFSTLLS---------------------------------VVANKLDLQ---IGRQI 297
           + F ++ L+S                                 V+    DL    +GRQ+
Sbjct: 283 NLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQL 342

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H  T+    +S + V N+L+DMY+KC     A+E+F  ++    + WT M+    Q G  
Sbjct: 343 HGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRA 402

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSA 416
           EEAL L+  M  A    ++ TF  ++ A +    +  G+QL  S     G    +   + 
Sbjct: 403 EEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTC 462

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
            LD+ ++SG L +A +    MP E +  +W AL+SAC +  DA+  ++  + +++
Sbjct: 463 YLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLE 517



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 173/386 (44%), Gaps = 34/386 (8%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y KS  L  A  LF+    R    ++ L+   S       A  +   M +     P
Sbjct: 126 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 185

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+   +++ S  +   +     Q+HA  +   YN   ++ +SLVD YCK    D  R+VF
Sbjct: 186 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 245

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEE-------------------------------AIK 160
             M  K+SV + AL++G+A  G +EE                               A++
Sbjct: 246 DSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVE 305

Query: 161 LFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           LFVEM+  G +  D F  +  +     LA   LGRQ+H   ++  F+ N+ V NAL+D+Y
Sbjct: 306 LFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMY 365

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   ++ AR++F  +   D +S+  M+   A + + +E+L L+  +       ++  F 
Sbjct: 366 SKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 425

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            L+   ++   +Q GRQ+         I+  ++     +D+ ++ G   EA+E+   + +
Sbjct: 426 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 485

Query: 339 -ISTVPWTAMISAYVQKGNLEEALNL 363
                 W A++SA  +  + E  + +
Sbjct: 486 EPDEATWGALLSACTKYKDAEMCIRI 511



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 2/250 (0%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N+V    L+SGY  +G    A +LF SM  R   +WT LI G     +   A +LF
Sbjct: 248 MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELF 307

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V+MR DG    D    + ++ G ++        Q+H   ++ G+ S +I+ N+L+D Y K
Sbjct: 308 VEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSK 367

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  AR VF+ +  +D +S+  ++ G A+ G  EEA+ L+  M   G KP++ TF   
Sbjct: 368 CSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGL 427

Query: 181 LSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EV 238
           + A      +  GRQ+  +   +      +      LDL S+   ++EA +L   MP E 
Sbjct: 428 IYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEP 487

Query: 239 DGVSYNVMIT 248
           D  ++  +++
Sbjct: 488 DEATWGALLS 497


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/658 (33%), Positives = 373/658 (56%), Gaps = 4/658 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N ++S Y K G+L  AR +F+SM  +  VSWT +I GYS+  +   A  L+V M 
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQM- 190

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD+ TF +++  CS  D      Q+HA ++K  + + LI  N+L+  Y K   +
Sbjct: 191 LRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQM 250

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSA 183
             A  VF  +  KD +S+ ++I GF++ G   EA+  F EM     ++P++F F +A SA
Sbjct: 251 ADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA 310

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L +   GRQ+H   +K     ++F   +L D+Y+K   +  AR +F  + + D V++
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  +A     KES   F +++ T    +     +LL   +  + L  G Q+H+  + 
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK 430

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEALN 362
                ++ V NSL+ MY+KC    +A ++F ++ +    V W  +++A +Q+    E L 
Sbjct: 431 MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLR 490

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L   M  + I  D  T  ++L +S ++AS  +G Q+H F+++SG   ++   +AL++MY 
Sbjct: 491 LTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYT 550

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GSL+ A + F  +   +I+SW++LI   AQ G  +   + F  M   G +P+ ++ + 
Sbjct: 551 KCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVG 610

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L+ACSH G++EEGL+ + +M + Y++ P KEH + MVD+L R+GC D AE  + QMPF 
Sbjct: 611 ILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFV 670

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W +++ +C++H NLE  K+AA+ + K++   ++A  V + NI+A +G W+  +++
Sbjct: 671 PDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP-SNSAAVVMLCNIHASSGHWKDFARL 729

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           + +MR   V KV   SW+E+K KVHVF A D LHP+  +I   +E LM ++  +G  P
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDP 787



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 263/506 (51%), Gaps = 4/506 (0%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           +KN  REA K F   +    S    VT+  L++ CS   +     ++H  ++   Y   +
Sbjct: 74  KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDM 133

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           I+ N ++  Y K   L  AR +F  MP K+ VS+ ++I+G+++ G  + AI L+V+M   
Sbjct: 134 ILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G  P  FTF + + +  GL D  L RQ+HA V+K+ F  ++   NAL+ +Y+K   + +A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVAN 287
             +F  +   D +S+  MI  ++      E+L  FRE L  + +  ++F F +  S  + 
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            L+   GRQIH   I     S++    SL DMYAKCG  E A+ +F ++     V W A+
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAI 373

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+ +    N +E+ + F +M    +  +  T  S+L A +E   L+ G Q+HS++++ GF
Sbjct: 374 IAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF 433

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFE 466
             ++   ++LL MY+K  +L DA+Q F+++  + +IVSWN L++AC Q   A   L+  +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M  S  +PD V+L +VL +       E G Q  +    K  L        +++++  + 
Sbjct: 494 LMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKC 552

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G  + A K+   +   PD I WSS+I
Sbjct: 553 GSLECARKMFDSIG-NPDIISWSSLI 577


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 340/601 (56%), Gaps = 38/601 (6%)

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA--RKLFGEMPEVDGVSY 243
           G   I   +QVHA + +    +  FV   LL   +K D  ++   R +F ++   +   +
Sbjct: 48  GCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLW 107

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             +I  YA    + ES+ L+  ++        F F+ LL   +  LD+ +GRQ+HTQTI+
Sbjct: 108 TALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTIL 167

Query: 304 TTAI-SEVKVANSLVDMYAKCG-------------------------------RFEEAKE 331
                S++ V N+L+DMY KCG                                 E A E
Sbjct: 168 IGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASE 227

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F  L     V WTAM++ Y Q     EAL +F  M  A +  D+ T   ++ A A+L +
Sbjct: 228 LFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGA 287

Query: 392 LSLGKQLHSFVIRSGF--MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
                 +     +SGF   SNV  GSAL+DMYAK GS++DA + F+ M ERN+ S++++I
Sbjct: 288 AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              A +G A A ++ F++M+++  +P+ V+ + VL+ACSH G++E+G Q F  M + + +
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P ++HYA MVD+L R+G  +EA  L+  MP  P   +W +++ +CRIH N + A+ AA 
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSK-VHV 628
            LF++E       Y+ +SNIYA AG+W+ VS+V+K MR +G++K    SWVE K   +H 
Sbjct: 468 HLFELEP-NGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHE 526

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F A D  HP++ EI++ +E+L+  +K  GY+P+ S   +D  +E K   L  HSE+LA+A
Sbjct: 527 FFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALA 586

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F L+ T  G  I ++KNLR C DCH+ +   S+ITGREI VRD+ RFHHF+DG CSC +F
Sbjct: 587 FGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNF 646

Query: 749 W 749
           W
Sbjct: 647 W 647



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 51/425 (12%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC-LD-LARRVFKE 133
             ++L GC+     N++ QVHA I + G      +   L+ +  K+   +D   R VF++
Sbjct: 42  LVSVLHGCTH---INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           +   +   + ALI G+A +G   E++ L+  M+  G  P  FTF A L A     D+ LG
Sbjct: 99  VEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158

Query: 194 RQVHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM----------------- 235
           RQVH   ++   F  +++V N L+D+Y K  C+    ++F EM                 
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAK 218

Query: 236 --------------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
                         P  D V++  M+T YA N + +E+L++F  +Q       +     +
Sbjct: 219 VGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGV 278

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTA-------ISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           +S  A     Q+G   +   +   A        S V V ++L+DMYAKCG  E+A ++F 
Sbjct: 279 ISACA-----QLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFE 333

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   +   +++MI  +   G    A+ LF EM +  I  ++ TF  +L A +    +  
Sbjct: 334 RMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQ 393

Query: 395 GKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G+QL + +    G   +    + ++D+  ++G L++A+   K MP   +   W AL+ AC
Sbjct: 394 GQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGAC 453

Query: 453 AQNGD 457
             +G+
Sbjct: 454 RIHGN 458



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 161/364 (44%), Gaps = 51/364 (14%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           WT LI GY+ +  F E+  L+  MR   G  P   TF  LL  CS     N   QVH   
Sbjct: 107 WTALIRGYALQGPFMESVLLYNSMRRQ-GIGPVSFTFTALLKACSAALDVNLGRQVHTQT 165

Query: 100 IKF-GYNSILIICNSLVDSYCKIRCLDLARRVFKEM------------------------ 134
           I   G+ S L + N+L+D Y K  CL    RVF EM                        
Sbjct: 166 ILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAA 225

Query: 135 -------PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
                  P KD V++ A++TG+A+     EA+++F  MQ  G K  + T    +SA   L
Sbjct: 226 SELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQL 285

Query: 188 ADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
                   V     ++ F    NV V +AL+D+Y+K   V +A K+F  M E +  SY+ 
Sbjct: 286 GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSS 345

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT--QTIV 303
           MI  +A +     +++LF E+  T    ++  F  +L+  ++   ++ G+Q+    +   
Sbjct: 346 MIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECH 405

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMISAYVQKGN 356
             A SE   A  +VD+  + GR EEA      L+ +  +P       W A++ A    GN
Sbjct: 406 GVAPSEDHYA-CMVDLLGRAGRLEEA------LNLVKMMPMNPHGGVWGALLGACRIHGN 458

Query: 357 LEEA 360
            + A
Sbjct: 459 PDMA 462



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 128/241 (53%), Gaps = 8/241 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M +++ +S   LI  Y K GN+  A ELF+ +  +  V+WT ++ GY+Q  + REA ++F
Sbjct: 201 MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVF 260

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTAN--ELIQVHADIIKFGYNSILIICNSLVDSY 118
             M+   G   D VT   ++S C++   A     ++  A+   FG  S +++ ++L+D Y
Sbjct: 261 ERMQA-AGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMY 319

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   ++ A +VF+ M +++  S++++I GFA  GL   A++LF EM     KP+  TF 
Sbjct: 320 AKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFI 379

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFV---ENVFVANALLDLYSKHDCVVEARKLFGEM 235
             L+A      +  G+Q+ A + + + V   E+ +    ++DL  +   + EA  L   M
Sbjct: 380 GVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYA--CMVDLLGRAGRLEEALNLVKMM 437

Query: 236 P 236
           P
Sbjct: 438 P 438


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/647 (34%), Positives = 366/647 (56%), Gaps = 6/647 (0%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           LF+ MV R  VSW  +I GY     + +A +LFV M  D     D VT    +  C+E  
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE-VKFDCVTMLVAVQACAELG 269

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
           +     Q+H   IKF +   L I N+L++ Y     L+ + ++F+ +P +D+  +N++I+
Sbjct: 270 SLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 329

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL-GRQVHAFVVKTNFV 206
            +A  G +EEA+ LF+ MQ  G K  + T    LS    LA   L G+ +HA V+K+   
Sbjct: 330 AYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 389

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
            +  + NALL +Y++ +CV   +K+F  M  VD +S+N MI   A N    ++ +LF  +
Sbjct: 390 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 449

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
           + +    + +   ++L+   +   L  GR IH   +  +      +  +L DMY  CG  
Sbjct: 450 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
             A+++F        + W AMI++YV+     +AL LF  M  +    +  T  ++L + 
Sbjct: 510 ATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSF 568

Query: 387 AELASLSLGKQLHSFVIRSGFMS--NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
             LA+L  G+ LH++V R GF    ++   +A + MYA+ GSL+ A   FK +P+RNI+S
Sbjct: 569 THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS 628

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WNA+I+    NG     + +F  M++ G++P+ V+ +SVLSACSH G IE GLQ F+SM 
Sbjct: 629 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMV 688

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
           Q + + P+  HY+ +VD+L R GC DEA + +  MP EPD  +W ++++SCR + + + A
Sbjct: 689 QDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQA 748

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           K   ++L K+E + +A  YV +SN+YA AG W  V +++  ++E+G+RK    SW+ +K+
Sbjct: 749 KTIFEKLDKLEPM-NAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKN 807

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           +VH F+A D  HPQ+++I  K+  L+  M++ GY PD     H+ED+
Sbjct: 808 QVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHEEDD 854



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 264/542 (48%), Gaps = 11/542 (2%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  AR +F++M DR  V W  ++ GY     + EA  L  +M  +    P+  T
Sbjct: 98  YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRE-NLRPNSRT 156

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCK--IRCLDLARRVFK 132
              LL  C           VH   ++ G ++S   +  +L+  Y +  +R L L   +F 
Sbjct: 157 MVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL---LFD 213

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
            M  ++ VS+NA+I+G+   G   +A++LFV+M     K    T   A+ A   L  + L
Sbjct: 214 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKL 273

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G+Q+H   +K  FVE++++ NALL++YS +  +  + +LF  +P  D   +N MI+ YA 
Sbjct: 274 GKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 333

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVK 311
              ++E++ LF  +Q     + +     +LS+       L  G+ +H   I +    +  
Sbjct: 334 FGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 393

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+L+ MY +    E  ++IF  +  +  + W  MI A  +     +A  LF  M  + 
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 453

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  +  T  SIL A  ++  L  G+ +H +V++     N    +AL DMY   G    A 
Sbjct: 454 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 513

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+  P+R+++SWNA+I++  +N  A   L  F  M+ S  +P+SV++++VLS+ +H  
Sbjct: 514 DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLA 572

Query: 492 LIEEGLQYFNSMTQK-YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
            + +G      +T++ + L        + + +  R G    AE +   +P + + I W++
Sbjct: 573 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNA 631

Query: 551 VI 552
           +I
Sbjct: 632 MI 633



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 244/492 (49%), Gaps = 11/492 (2%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+  T   +L  C+  +       +H  I        + +  ++VD YCK   ++ A
Sbjct: 48  GVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDA 107

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  M  +D V +NA++ G+   G  EEA+ L  EM     +P+  T  A L A  G 
Sbjct: 108 RCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGA 167

Query: 188 ADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +++ LGR VH + ++   F  N  VA AL+  Y + D  V    LF  M   + VS+N M
Sbjct: 168 SELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAM 226

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV---ANKLDLQIGRQIHTQTIV 303
           I+ Y     Y ++L+LF ++     D  +F   T+L  V   A    L++G+QIH   I 
Sbjct: 227 ISGYYDVGDYFKALELFVQML---VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK 283

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              + ++ + N+L++MY+  G  E + ++F ++ +     W +MISAY   G  EEA++L
Sbjct: 284 FEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDL 343

Query: 364 FIEMCRANISADQATFASILRASAELAS-LSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           FI M    +  D+ T   +L    ELAS L  GK LH+ VI+SG   +   G+ALL MY 
Sbjct: 344 FIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYT 403

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +   ++   + F  M   +I+SWN +I A A+N       + FE M +S  +P+S +++S
Sbjct: 404 ELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIIS 463

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L+AC     ++ G +  +    K+ +   +    ++ D+    G    A  L    P +
Sbjct: 464 ILAACEDVTCLDFG-RSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP-D 521

Query: 543 PDEIMWSSVINS 554
            D I W+++I S
Sbjct: 522 RDLISWNAMIAS 533



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 231/467 (49%), Gaps = 13/467 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y  +G+L ++ +LF S+ +R A  W  +I  Y+      EA  LF+ M+++ G 
Sbjct: 294 NALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSE-GV 352

Query: 70  DPDYVTFATLLSGCSEPDTANELIQ---VHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
             D  T   +LS C E   A+ L++   +HA +IK G      + N+L+  Y ++ C++ 
Sbjct: 353 KKDERTVVIMLSMCEE--LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVES 410

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            +++F  M   D +S+N +I   A+  L  +A +LF  M+    KP+ +T  + L+A   
Sbjct: 411 VQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACED 470

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +  +  GR +H +V+K +   N  +  AL D+Y        AR LF   P+ D +S+N M
Sbjct: 471 VTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAM 530

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH---TQTIV 303
           I  Y  N Q  ++L LF  +  +  + +      +LS   +   L  G+ +H   T+   
Sbjct: 531 IASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 589

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           +  + ++ +AN+ + MYA+CG  + A+ IF  L   + + W AMI+ Y   G   +A+  
Sbjct: 590 SLGL-DLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLA 648

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
           F +M       +  TF S+L A +    + +G QL HS V        +   S ++D+ A
Sbjct: 649 FSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLA 708

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDM 468
           + G + +A +    MP E +   W AL+S+C    DA+     FE +
Sbjct: 709 RGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 11/421 (2%)

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           KD   +N++I   A    ++  +  + +M+ LG  P++ T    L A      +  G+ +
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
           H  +  T+ +++V V  A++D Y K   V +AR +F  M + D V +N M+  Y     Y
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANS 315
           +E++ L RE+       +      LL       +L++GR +H   +      S   VA +
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195

Query: 316 LVDMYAKCGRFEE--AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           L+  Y    RF+      +F  +   + V W AMIS Y   G+  +AL LF++M    + 
Sbjct: 196 LIGFYL---RFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK 252

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
            D  T    ++A AEL SL LGKQ+H   I+  F+ +++  +ALL+MY+ +GSL+ + Q 
Sbjct: 253 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 312

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC--G 491
           F+ +P R+   WN++ISA A  G  +  +  F  M   G + D  +++ +LS C     G
Sbjct: 313 FESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASG 372

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++   +  ++   K  +R       +++ +     C +  +K+  +M    D I W+++
Sbjct: 373 LLKG--KSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMK-GVDIISWNTM 429

Query: 552 I 552
           I
Sbjct: 430 I 430


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 337/573 (58%), Gaps = 2/573 (0%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + AA++A +    +  GRQVHA ++   +   VF+   L+ +Y +   + +AR +   MP
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E   VS+  MI+ Y+  E++ E+L LF ++       +++  +T+L+  +    +  G+Q
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H+  + T   S + V +SL+DMYAK    +EA+ +F  L     V  TA+IS Y QKG 
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEAL+LF ++    +  +  TF +++ A + LASL  GKQ+H+ ++R      V   ++
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY+K G L  + + F  M ER++VSWNA++    ++G     +  F+D+     +PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPD 311

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
           SV+LL+VLS CSH GL++EGL  F+++ ++        HY  ++D+L RSG  ++A  L+
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MPFE    +W S++ +CR+H N+   +  A +L +ME   +A  YV +SNIYA AG W
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEP-ENAGNYVILSNIYAAAGMW 430

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +V+K M E+ V K    SW+ L   +H F +++  HP   +I  KI+ +  ++K  
Sbjct: 431 KDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAA 490

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           G+ PD SC LHD D+E K   L  HSE+LAI F L+NTP G  I VMKNLR C DCH   
Sbjct: 491 GFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFA 550

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K +SK+  REI++RD +RFH    G C+C D+W
Sbjct: 551 KFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 205/388 (52%), Gaps = 5/388 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+   +  +   ++ C E     E  QVHA +I   Y   + +   LV  Y +   LD A
Sbjct: 5   GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R V   MP++  VS+  +I+G+++   + EA+ LF++M   G  P+++T A  L++  G 
Sbjct: 65  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             I  G+QVH+ +VKTNF  ++FV ++LLD+Y+K + + EAR++F  +PE D VS   +I
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+L LFR+L       +   F+TL++ ++    L  G+Q+H   +     
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 244

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V + NSL+DMY+KCG+   ++ +F N+   S V W AM+  Y + G   E ++LF ++
Sbjct: 245 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 304

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSG 425
               +  D  T  ++L   +    +  G  +   V++  S  +     G  ++D+  +SG
Sbjct: 305 -HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSG 362

Query: 426 SLKDAIQTFKEMPERNIVS-WNALISAC 452
            L+ A+   + MP  +  S W +L+ AC
Sbjct: 363 RLEKALNLIENMPFESTPSIWGSLLGAC 390



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 232/486 (47%), Gaps = 62/486 (12%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ YV+ G L  AR + + M +R+ VSWT +I GYSQ  +  EA  LF+ M    G  P
Sbjct: 51  LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKM-LRAGCIP 109

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T AT+L+ CS P +  +  QVH+ ++K  + S + + +SL+D Y K   +  ARRVF
Sbjct: 110 NEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVF 169

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +P++D VS  A+I+G+A++GL+EEA+ LF ++   G + +  TF   ++A  GLA + 
Sbjct: 170 DTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD 229

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+QVHA +++      V + N+L+D+YSK   ++ +R++F  M E   VS+N M+  Y 
Sbjct: 230 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 289

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT--TAISE 309
            +    E + LF++L              +LS  ++   +  G  I   T+V   +A+  
Sbjct: 290 RHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIF-DTVVKEQSALLH 347

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMC 368
                 ++D+  + GR E+A  +  N+   ST   W +++ A                 C
Sbjct: 348 TGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA-----------------C 390

Query: 369 R--ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           R  AN+   +     +L    E A         ++VI S             ++YA +G 
Sbjct: 391 RVHANVHVGELVAQKLLEMEPENAG--------NYVILS-------------NIYAAAGM 429

Query: 427 LKDAIQTFKEMPERNIV-----SWNALISAC----------AQNGDAQATLKS-FEDMVQ 470
            KD  +  K M E+ +      SW  L                  D  A +K  F D+  
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 489

Query: 471 SGYQPD 476
           +G+ PD
Sbjct: 490 AGFVPD 495



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M     SA    + + + A  E  +L  G+Q+H+ +I + +   VF G+ L+ MY + G+
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L DA      MPER++VSW  +IS  +Q       L  F  M+++G  P+  +L +VL++
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS    I +G Q  +S+  K          +S++D+  +S    EA ++   +P E D +
Sbjct: 121 CSGPQSIYQGKQ-VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP-ERDVV 178

Query: 547 MWSSVINSCRIHKNLEFAKKAADQ 570
             +++I+         +A+K  D+
Sbjct: 179 SCTAIISG--------YAQKGLDE 194



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  +R +F++M++R+ VSW  ++ GY +     E   LF D+  +   
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE--V 308

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIK 101
            PD VT   +LSGCS     +E + +   ++K
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 340


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 337/573 (58%), Gaps = 2/573 (0%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           + AA++A +    +  GRQVHA ++   +   VF+   L+ +Y +   + +AR +   MP
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E   VS+  MI+ Y+  E++ E+L LF ++       +++  +T+L+  +    +  G+Q
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           +H+  + T   S + V +SL+DMYAK    +EA+ +F  L     V  TA+IS Y QKG 
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
            EEAL+LF ++    +  +  TF +++ A + LASL  GKQ+H+ ++R      V   ++
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+DMY+K G L  + + F  M ER++VSWNA++    ++G     +  F+D+     +PD
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPD 343

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
           SV+LL+VLS CSH GL++EGL  F+++ ++        HY  ++D+L RSG  ++A  L+
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 403

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
             MPFE    +W S++ +CR+H N+   +  A +L +ME   +A  YV +SNIYA AG W
Sbjct: 404 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEP-ENAGNYVILSNIYAAAGMW 462

Query: 597 ESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE 656
           + V +V+K M E+ V K    SW+ L   +H F +++  HP   +I  KI+ +  ++K  
Sbjct: 463 KDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAA 522

Query: 657 GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAI 716
           G+ PD SC LHD D+E K   L  HSE+LAI F L+NTP G  I VMKNLR C DCH   
Sbjct: 523 GFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFA 582

Query: 717 KLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           K +SK+  REI++RD +RFH    G C+C D+W
Sbjct: 583 KFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 206/388 (53%), Gaps = 5/388 (1%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+   +  +   ++ C E     E  QVHA +I   Y   + +   LV  Y +   LD A
Sbjct: 37  GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 96

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R V   MP++  VS+  +I+G+++   + EA+ LF++M   G  P+++T A  L++  G 
Sbjct: 97  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 156

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             I  G+QVH+ +VKTNF  ++FV ++LLD+Y+K + + EAR++F  +PE D VS   +I
Sbjct: 157 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 216

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + YA     +E+L LFR+L       +   F+TL++ ++    L  G+Q+H   +     
Sbjct: 217 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 276

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             V + NSL+DMY+KCG+   ++ +F N+   S V W AM+  Y + G   E ++LF ++
Sbjct: 277 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 336

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSG 425
            +  +  D  T  ++L   +    +  G  +   V++  S  +     G  ++D+  +SG
Sbjct: 337 HK-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG-CIIDLLGRSG 394

Query: 426 SLKDAIQTFKEMPERNIVS-WNALISAC 452
            L+ A+   + MP  +  S W +L+ AC
Sbjct: 395 RLEKALNLIENMPFESTPSIWGSLLGAC 422



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 232/486 (47%), Gaps = 62/486 (12%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ YV+ G L  AR + + M +R+ VSWT +I GYSQ  +  EA  LF+ M    G  P
Sbjct: 83  LVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKM-LRAGCIP 141

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T AT+L+ CS P +  +  QVH+ ++K  + S + + +SL+D Y K   +  ARRVF
Sbjct: 142 NEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVF 201

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             +P++D VS  A+I+G+A++GL+EEA+ LF ++   G + +  TF   ++A  GLA + 
Sbjct: 202 DTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLD 261

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+QVHA +++      V + N+L+D+YSK   ++ +R++F  M E   VS+N M+  Y 
Sbjct: 262 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYG 321

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT--TAISE 309
            +    E + LF++L              +LS  ++   +  G  I   T+V   +A+  
Sbjct: 322 RHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIF-DTVVKEQSALLH 379

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMC 368
                 ++D+  + GR E+A  +  N+   ST   W +++ A                 C
Sbjct: 380 TGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA-----------------C 422

Query: 369 R--ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           R  AN+   +     +L    E A         ++VI S             ++YA +G 
Sbjct: 423 RVHANVHVGELVAQKLLEMEPENAG--------NYVILS-------------NIYAAAGM 461

Query: 427 LKDAIQTFKEMPERNIV-----SWNALISAC----------AQNGDAQATLKS-FEDMVQ 470
            KD  +  K M E+ +      SW  L                  D  A +K  F D+  
Sbjct: 462 WKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKA 521

Query: 471 SGYQPD 476
           +G+ PD
Sbjct: 522 AGFVPD 527



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M     SA    + + + A  E  +L  G+Q+H+ +I + +   VF G+ L+ MY + G+
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L DA      MPER++VSW  +IS  +Q       L  F  M+++G  P+  +L +VL++
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS    I +G Q  +S+  K          +S++D+  +S    EA ++   +P E D +
Sbjct: 153 CSGPQSIYQGKQ-VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP-ERDVV 210

Query: 547 MWSSVINSCRIHKNLEFAKKAADQ 570
             +++I+         +A+K  D+
Sbjct: 211 SCTAIISG--------YAQKGLDE 226



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G L  +R +F++M++R+ VSW  ++ GY +     E   LF D+  +   
Sbjct: 283 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE--V 340

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIK 101
            PD VT   +LSGCS     +E + +   ++K
Sbjct: 341 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK 372


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/563 (38%), Positives = 329/563 (58%), Gaps = 8/563 (1%)

Query: 192 LGRQVHAFVVKTNFVENV---FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           LGR  HA ++KT  ++N    F+ N L+++YSK D    A+ L    P    V++  +I 
Sbjct: 24  LGRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIA 81

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
               N ++  +L  F  ++      + F F        +     +G+Q+H   +    IS
Sbjct: 82  GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +V V  S  DMY+K G  EEA+++F  +   +   W A +S  V +G  ++AL  FIE  
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEAR 201

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  I       +S+L A A L+ L +GK +H+  +++  + N+F GSAL+DMY K GS++
Sbjct: 202 KEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIE 261

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ--PDSVSLLSVLSA 486
           DA + F EMPERN+V+WNA+I   A  G A   +  F++M    ++  P+ V+ + VLSA
Sbjct: 262 DAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSA 321

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CS  G +  G++ F SM  +Y + P  EHYA +VD+L R+G  ++A + + +MP  P   
Sbjct: 322 CSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVS 381

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +W +++ + ++    E  K AAD LF+++ L D+  +V +SN++A AG+WE  + V+K M
Sbjct: 382 VWGALLGASKMFGKSELGKVAADNLFELDPL-DSGNHVLLSNMFAAAGRWEEATLVRKEM 440

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCAL 666
           ++ G++K    SW+   + VHVF A D  H + +EI+  +  L  EM+  GY PDTS AL
Sbjct: 441 KDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFAL 500

Query: 667 HDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
            D +EE K   + YHSE++A+AF LI+ P G PI + KNLR C DCH+AIK IS I GRE
Sbjct: 501 FDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGRE 560

Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
           I VRD++ FH F+D  CSCRD+W
Sbjct: 561 IIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 5/369 (1%)

Query: 96  HADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           HA IIK   N +   I N LV+ Y K+   + A+ +    P +  V++ ALI G  + G 
Sbjct: 29  HAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR 88

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
              A+  F  M+    +P+DFTF  A  A   L    +G+QVHA  VK   + +VFV  +
Sbjct: 89  FTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCS 148

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
             D+YSK     EARK+F EMPE +  ++N  ++      +Y ++L  F E +    + +
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPT 208

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F  S++LS  A    L++G+ +HT  +    +  + V ++LVDMY KCG  E+A+  F 
Sbjct: 209 DFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFD 268

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRAN-ISADQATFASILRASAELASL 392
            +   + V W AMI  Y  +G  + A+ LF EM C ++ ++ +  TF  +L A +   S+
Sbjct: 269 EMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSV 328

Query: 393 SLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALIS 450
           ++G ++  S   R G        + ++D+  ++G ++ A Q  K+MP R  VS W AL+ 
Sbjct: 329 NVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 388

Query: 451 ACAQNGDAQ 459
           A    G ++
Sbjct: 389 ASKMFGKSE 397



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 215/492 (43%), Gaps = 65/492 (13%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K     +A+ L +   +R+ V+WT LI G  Q  +F  A   F +MR D   
Sbjct: 46  NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-I 104

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+  TF           +     QVHA  +K G  S + +  S  D Y K    + AR+
Sbjct: 105 QPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARK 164

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F EMP+++  ++NA ++    EG  ++A+  F+E +  G +P+DF  ++ LSA  GL+ 
Sbjct: 165 MFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSV 224

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + +G+ VH   VK   V N+FV +AL+D+Y K   + +A + F EMPE + V++N MI  
Sbjct: 225 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGG 284

Query: 250 YAWNEQYKESLKLFRELQFT--RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           YA   Q   ++ LF E+     R   +   F  +LS  +    + +G +I         I
Sbjct: 285 YAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGI 344

Query: 308 SE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE----EAL 361
               +    +VD+  + G  E+A +    +    TV  W A++ A    G  E     A 
Sbjct: 345 EPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAAD 404

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
           NLF                       EL  L  G  +         +SN         M+
Sbjct: 405 NLF-----------------------ELDPLDSGNHV--------LLSN---------MF 424

Query: 422 AKSGSLKDAIQTFKEMPERNI-----VSW----------NALISACAQNGDAQATLKSFE 466
           A +G  ++A    KEM +  I      SW           A  ++  +N + QA L    
Sbjct: 425 AAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLR 484

Query: 467 -DMVQSGYQPDS 477
            +M  +GY PD+
Sbjct: 485 GEMEAAGYIPDT 496



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 23/211 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM------VDRTAVSWTILIGGYSQKNQFR 54
           MP +N V+ N +I GY   G    A  LF+ M      V    V++  ++   S+     
Sbjct: 270 MPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVN 329

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
              ++F  MR   G +P    +A ++        A  + Q +  I K      + +  +L
Sbjct: 330 VGMEIFESMRGRYGIEPGAEHYACVVDLLGR---AGMVEQAYQFIKKMPIRPTVSVWGAL 386

Query: 115 VDS---YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
           + +   + K     +A     E+   DS +   L   FA  G  EEA  +  EM+ +G K
Sbjct: 387 LGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIK 446

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
                       G G + I  G  VH F  K
Sbjct: 447 -----------KGAGCSWITAGNAVHVFQAK 466


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/600 (35%), Positives = 349/600 (58%), Gaps = 42/600 (7%)

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALL----DLYSKHDCVVEARKLFGEMPEVDGVSY 243
           +D+   + +HA++++T+ + +VF A+ L+    D  S    +  A ++F ++   +   +
Sbjct: 28  SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIF 87

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRF--DRSQFPFSTLLSVVANKLD-LQIGRQIHTQ 300
           N MI  ++ ++   ++   + + Q      D   FPF   L     KL  + +G Q H  
Sbjct: 88  NAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPF---LVKSCTKLHCISMGSQAHGH 144

Query: 301 TIVTTAISEVKVANSLVDMYA-------------------------------KCGRFEEA 329
            I      +V V NSLV MYA                               KCG  E A
Sbjct: 145 IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESA 204

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +++F  +   + V W+ MIS Y Q  + ++A+ LF  +    + A++    S++ + A L
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            +L LG++ H +V+++G   N+  G+AL+DMYA+ GS+  A+  F+++PER+ +SW ALI
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI 324

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +  A +G ++ +LK F  MV++G  P  ++  +VLSACSH GL+E G Q F SM + +++
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P+ EHY  MVD+L R+G  +EAE+ + +MP +P+  +W +++ +CRIHKN E  ++   
Sbjct: 385 EPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGK 444

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            L ++   + +  YV +SNIYA A +WE V+++++ M+ +G++K   +S +EL  +VH F
Sbjct: 445 ILIQLLP-QHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKF 503

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
           T  D  HP+ ++I R  E ++  ++  GY+ +T+ AL D DEE K  +L  HSE+LAIAF
Sbjct: 504 TIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAF 563

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ++ +  G+PI ++KNLR C DCH A KLISK+ GRE+ VRD +RFHHF+ G CSC D+W
Sbjct: 564 GMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 41/420 (9%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           +I+ H     F  + ++  C   VD       +D A R+F ++   +   FNA+I G + 
Sbjct: 40  MIRTHIICDVFAASRLIAFC---VDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSG 96

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               ++A   +V+ Q  G  P + TF   + +   L  I++G Q H  ++K  F ++V+V
Sbjct: 97  SKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYV 156

Query: 212 ANALLDLYSK-----------------------------HDC--VVEARKLFGEMPEVDG 240
            N+L+ +Y+                              + C  V  ARKLF +MPE + 
Sbjct: 157 QNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNL 216

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V+++ MI+ YA N  + ++++LF+ LQ      ++    +++S  A+   L++G + H  
Sbjct: 217 VTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDY 276

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +       + +  +LVDMYA+CG  ++A  +F +L    T+ WTA+I+     G  E +
Sbjct: 277 VVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERS 336

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG-SALLD 419
           L  F  M  A ++    TF ++L A +    +  G Q+   + R   +         ++D
Sbjct: 337 LKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVD 396

Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ-----SGY 473
           +  ++G L++A +   +MP + N   W AL+ AC  + +A+   +  + ++Q     SGY
Sbjct: 397 LLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGY 456



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 125/233 (53%), Gaps = 2/233 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + VS   +I G+ K G++ +AR+LF+ M ++  V+W+ +I GY+Q N F +A +LF  ++
Sbjct: 184 DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ 243

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
           + G    + V   +++S C+         + H  ++K G    LI+  +LVD Y +   +
Sbjct: 244 SQGVRANETV-MVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSI 302

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D A  VF+++P++D++S+ ALI G A  G +E ++K F  M   G  P D TF A LSA 
Sbjct: 303 DKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSAC 362

Query: 185 VGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
                +  G Q+   + + + VE  +     ++DL  +   + EA +   +MP
Sbjct: 363 SHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMP 415



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 164/359 (45%), Gaps = 34/359 (9%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  +F+ + +     +  +I G+S      +AF  +V  +  G   PD +TF  L+  C+
Sbjct: 72  ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQG-LLPDNLTFPFLVKSCT 130

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI----------------------- 121
           +    +   Q H  IIK G+   + + NSLV  Y                          
Sbjct: 131 KLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTS 190

Query: 122 ------RCLDL--ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
                 +C D+  AR++F +MP+K+ V+++ +I+G+A+    ++A++LF  +Q  G + +
Sbjct: 191 MIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRAN 250

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           +    + +S+   L  + LG + H +VVK     N+ +  AL+D+Y++   + +A  +F 
Sbjct: 251 ETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFE 310

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
           ++PE D +S+  +I   A +   + SLK F  +           F+ +LS  ++   ++ 
Sbjct: 311 DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVER 370

Query: 294 GRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISA 350
           G QI         +   ++    +VD+  + G+ EEA+     +      P W A++ A
Sbjct: 371 GFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGA 429


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/625 (34%), Positives = 355/625 (56%), Gaps = 3/625 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAGV 185
           A  VF    + D +++N+++  F    +   A++ + EM       P  FTF + L    
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L +  +G+ +H  VVK     ++++   LL++Y+    +  AR LF  M   + V +  
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI+ Y  N    E+L L+++++   F   +   +TL+S  A   DL +G ++H+      
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
                 + ++LV+MYAKCG  + A+++F  LS      W+A+I  YV+     EAL LF 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 366 EMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           E+   +N+  ++ T  +++ A A+L  L  G+ +H ++ R+    +V   ++L+DM++K 
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  A + F  M  ++++SWN++++  A +G  +  L  F  M  +  QPD ++ + VL
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACSH GL++EG + F  +   Y +R K EHY  MVD+LCR+G   EA + +  MP +PD
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W S++ +CR++ NLE  ++AA  L K+E   D   Y+ +SNIYA    W  V +V++
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGV-YILLSNIYAKRKMWNEVKKVRE 509

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M E+G++K    S V + +  H F A D  HP+  EI   +  + +++K  GY  DTS 
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSE 569

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            L + D+  K ES+  HSE+LA+ + L+ +  G  I+++KNLR C+DCH  IKL+SKI  
Sbjct: 570 VLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQ 629

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           R+IT+RD +RFHHFKDG CSCRD+W
Sbjct: 630 RQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 229/451 (50%), Gaps = 7/451 (1%)

Query: 8   STNMLISGYVKSGNLAT--ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           S N LI+  +  G+L    A  +F    +   ++W  ++  +   N  R A + + +M  
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
              + PD  TF +LL GC+          +H  ++K+  +S L I  +L++ Y     L 
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F+ M  ++ V + ++I+G+ K     EA+ L+ +M+  GF P + T A  +SA  
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L D+ +G ++H+ + + +      + +AL+++Y+K   +  AR++F ++ + D  +++ 
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSA 251

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +I  Y  N +  E+L+LFRE+      R ++     ++S  A   DL+ GR +H     T
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                V + NSL+DM++KCG  + AK IF ++S+   + W +M++ +   G   EAL  F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQF 371

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYA 422
             M   ++  D+ TF  +L A +    +  GK+L  + I + +   + S     ++D+  
Sbjct: 372 RLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLC 430

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++G L +A +  + MP + +   W +++ AC
Sbjct: 431 RAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/750 (33%), Positives = 399/750 (53%), Gaps = 19/750 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N L+  Y +  +   A  L + M  R A+SW  +I   +Q   F  +   F  M  DG 
Sbjct: 50  SNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDG- 108

Query: 69  SDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           S PD V F +L+     P T    E++Q  A+  K G++   ++  +L+  Y +   LD 
Sbjct: 109 SLPDAVVFLSLIKA---PRTIQEGEIVQEFAE--KSGFDRSFVVGTALIGMYGRCGRLDR 163

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+  F  + ++  VS+NALIT +++    E+++++F EM   G  P+  T     SA  G
Sbjct: 164 AKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAG 223

Query: 187 LAD--IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
           +A      G  +H+  + +  +    VAN++++L+ +   +  A  +F +M   D  S+N
Sbjct: 224 IAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWN 283

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ +A N     +L L+  +   R D     F  +L       DL+ G  IH      
Sbjct: 284 TMISAFAQNGHSSGALDLYGRMTI-RPD--GVTFVNVLEACDCPDDLERGESIHRDVRAH 340

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S++ VA +LV MY +CGR + A E+FA + H   +   A+I+A+ Q G  + +L  F
Sbjct: 341 GYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHF 400

Query: 365 IEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGF---MSNVFSGSALLDM 420
            +M +  I   + T  ++L A A   + +   + LH ++          ++   +AL++M
Sbjct: 401 RQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNM 460

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           YAK G L  A   F   P+ N+ +WNA+++  AQ+G A   ++   +M  +G  PD +S 
Sbjct: 461 YAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISF 520

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
            + LSA SH   +E+G + F ++++ Y L P  EHY ++VD+L R+G  +EAE  +  M 
Sbjct: 521 TAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMA 580

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
              D   W +++ +CRIHK+ + A +AA+ +  ++     A Y  +SN+Y+ AG+W+   
Sbjct: 581 IAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDP-SHGASYTVLSNVYSAAGRWDEAE 639

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK-KEGYK 659
           ++++ M E G RK    SW+E+K++VH F   D  HP+T EI  +++ L   +K +E Y 
Sbjct: 640 EIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYV 699

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD    LHD ++E +   L +HSE+LA+ F LI T EGS I ++KNLR C DCH  +KL 
Sbjct: 700 PDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLT 759

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           SK T REI VRD  RFHHF  G CSC D W
Sbjct: 760 SKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 195/394 (49%), Gaps = 10/394 (2%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++H  +I+ GY   L + N L+  Y ++     A  +   MP+++++S+NA+I   A+ G
Sbjct: 33  KIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAG 92

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               ++  F  M   G  P    F + + A   + +   G  V  F  K+ F  +  V  
Sbjct: 93  DFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIVQEFAEKSGFDRSFVVGT 149

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL+ +Y +   +  A+  F  + E   VS+N +IT Y+  ++ ++SL++FRE+       
Sbjct: 150 ALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAP 209

Query: 274 SQFPFSTLLSVVANKLDLQI---GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           +      + S VA  +  +I   G  IH+ +I +  IS   VANS+++++ + G    A 
Sbjct: 210 NAVTIICIASAVAG-IAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRAN 268

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +IF  +       W  MISA+ Q G+   AL+L+  M    I  D  TF ++L A     
Sbjct: 269 DIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM---TIRPDGVTFVNVLEACDCPD 325

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
            L  G+ +H  V   G+ S++   +AL+ MY + G L  A + F  +    +++ NA+I+
Sbjct: 326 DLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIA 385

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           A AQ G A  +L  F  M+Q G +P   +L++VL
Sbjct: 386 AHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVL 419



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 155/307 (50%), Gaps = 10/307 (3%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H  V+++ + +++F++N LL +Y++ +   +A  L   MP  + +S+N +I   A 
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQ 90

Query: 253 NEQYKESLKLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              +  SL  F R LQ    D S       LS++     +Q G  +      +       
Sbjct: 91  AGDFPRSLLFFQRMLQ----DGSLPDAVVFLSLIKAPRTIQEGEIVQEFAEKSGFDRSFV 146

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V  +L+ MY +CGR + AK+ F  +     V W A+I+ Y +    E++L +F EM    
Sbjct: 147 VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQG 206

Query: 372 ISADQATFASILRASAELAS--LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           I+ +  T   I  A A +A+   + G  +HS  I SG +S     +++++++ + G++  
Sbjct: 207 IAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITR 266

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A   F++M  R++ SWN +ISA AQNG +   L  +  M     +PD V+ ++VL AC  
Sbjct: 267 ANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACDC 323

Query: 490 CGLIEEG 496
              +E G
Sbjct: 324 PDDLERG 330



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 9/330 (2%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           T   N +I+ + + GN+  A ++F  M  R   SW  +I  ++Q      A  L+  M  
Sbjct: 248 TTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTI 307

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
                PD VTF  +L  C  PD       +H D+   GY+S LI+  +LV  Y +   LD
Sbjct: 308 ----RPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLD 363

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL-SAG 184
            A  VF  +     ++ NA+I   A+ G  + ++  F +M  LG +PS FT  A L +  
Sbjct: 364 RAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACA 423

Query: 185 VGLADIALGRQVHAFVVKTNF---VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
              A  + GR +H ++ +        ++ V NAL+++Y+K   +  AR +F   P+ +  
Sbjct: 424 TSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVS 483

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HTQ 300
           ++N ++  YA +     +++L  E+Q          F+  LS  ++   ++ G +I +  
Sbjct: 484 TWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAI 543

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           +     I  V+   ++VD+  + G  EEA+
Sbjct: 544 SRDYGLIPSVEHYGAVVDLLGRAGWLEEAE 573



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 165/371 (44%), Gaps = 35/371 (9%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
           +  L  +V     L+ GR+IH + I +     + ++N L+ MYA+     +A+ +   + 
Sbjct: 15  WRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMP 74

Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
             + + W A+I A  Q G+   +L  F  M +     D   F S+++A     ++  G+ 
Sbjct: 75  RRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAP---RTIQEGEI 131

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
           +  F  +SGF  +   G+AL+ MY + G L  A   F  + ER +VSWNALI+  ++  +
Sbjct: 132 VQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDE 191

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACS-------------HCGLIEEGLQYFNS-- 502
            + +L+ F +M+  G  P++V+++ + SA +             H   I+ GL    +  
Sbjct: 192 KEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVA 251

Query: 503 ------------MTQKYKLRPKKEH-----YASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
                       +T+   +  K +      + +M+    ++G    A  L  +M   PD 
Sbjct: 252 NSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIRPDG 311

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           + + +V+ +C    +LE  +     +       D     A+ ++Y   G+ +  ++V  A
Sbjct: 312 VTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAA 371

Query: 606 MRERGVRKVTA 616
           ++  GV  + A
Sbjct: 372 IQHPGVITLNA 382



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 5/175 (2%)

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           ++  + R   E  SL  G+++H  VI SG+  ++F  + LL MYA+  S +DA      M
Sbjct: 14  SWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRM 73

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
           P RN +SWNA+I A AQ GD   +L  F+ M+Q G  PD+V  LS++ A      I+EG 
Sbjct: 74  PRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPR---TIQEG- 129

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +      +K           +++ +  R G  D A+    ++  E   + W+++I
Sbjct: 130 EIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQ-ERGVVSWNALI 183



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 4/237 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + +    L+S Y + G L  A E+F ++     ++   +I  ++Q  +   +   F  
Sbjct: 343 DSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQ 402

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH---ADIIKFGYNSILIICNSLVDSYC 119
           M   G     +   A L +  +    A+    +H   A+         +++ N+LV+ Y 
Sbjct: 403 MLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYA 462

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   LD AR +F   PQ +  ++NA++ G+A+ G    A++L  EMQ  G  P   +F A
Sbjct: 463 KCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTA 522

Query: 180 ALSAGVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           ALSA      +  G ++ +A       + +V    A++DL  +   + EA      M
Sbjct: 523 ALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSM 579


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/653 (35%), Positives = 377/653 (57%), Gaps = 4/653 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAF--KLFVDMRTDG 67
           N LI+ Y K  +L  A+ +F+ + ++  +SW  LI GYSQ+     +F  +LF  MR D 
Sbjct: 47  NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
              P+  TF+ + +  S   +     Q HA  IK      + + +SL++ YCK   L  A
Sbjct: 107 -ILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEA 165

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  MP+++ V++  +I+G+A + L  EA ++F  M+      ++F F + LSA    
Sbjct: 166 REVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVP 225

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  G+Q+H   VKT  +  + + NAL+ +Y+K   + ++ ++F    + + ++++ MI
Sbjct: 226 EFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMI 285

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           T YA +    ++LKLF  + F   + S+F    +L+  ++   ++ G+Q+H   +     
Sbjct: 286 TGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFE 345

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S++ +  +LVDMYAK G  E+A++ F  L     V WT+MI+ YVQ G  E+AL+L+  M
Sbjct: 346 SQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRM 405

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  ++ T AS+L+A + LA+   G+Q+H+  I+ G    V  GSAL  MYAK G+L
Sbjct: 406 QMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNL 465

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           ++    F+ MPER+I+SWNA+IS  +QNG  +  L+ FE+M Q   +PD V+ ++VLSAC
Sbjct: 466 EEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSAC 525

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++ G  YF  M  ++ L PK EHYA MVD+L R+G   EA++ +     +    +
Sbjct: 526 SHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCL 585

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W  ++ +CR ++N E    A ++L ++   ++++ YV +S IY   G+ E V +V+  M+
Sbjct: 586 WRILLGACRNYRNYELGAYAGEKLMELGS-QESSAYVLLSGIYTALGRPEDVERVRSMMK 644

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
            RGV K    SW+ELKS VHVF   D++HP   EIR +I  L ++MK EGY+P
Sbjct: 645 VRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQP 697



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 279/491 (56%), Gaps = 9/491 (1%)

Query: 95  VHADIIKFGYNSILI-ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +HA IIK   +S  I + NSL++ Y K   L  A+ VF  +  KD +S+N LI G++++G
Sbjct: 29  LHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQG 88

Query: 154 LNEEA--IKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               +  ++LF  M+     P+  TF+   +A   L+ I  G+Q HA  +K     +VFV
Sbjct: 89  PTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFV 148

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            ++LL++Y K   + EAR++F  MPE + V++  MI+ YA      E+ ++F  ++    
Sbjct: 149 GSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEE 208

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
           D ++F F+++LS +A    +  G+QIH   + T  +  + + N+LV MYAKCG  +++ +
Sbjct: 209 DVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQ 268

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F   +  +++ W+AMI+ Y Q G+  +AL LF  M  A I+  + T   +L A ++  +
Sbjct: 269 VFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACA 328

Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
           +  GKQ+H+++++ GF S ++  +AL+DMYAKSG  +DA + F  + + ++V W ++I+ 
Sbjct: 329 VEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAG 388

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
             QNG+ +  L  +  M   G  P+ +++ SVL ACS+    ++G Q  ++ T KY L  
Sbjct: 389 YVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQ-IHARTIKYGLGL 447

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
           +    +++  +  + G  +E   +  +MP E D I W+++I+   + +N  + K+A  +L
Sbjct: 448 EVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISWNAMISG--LSQN-GYGKEAL-EL 502

Query: 572 FKMEKLRDAAP 582
           F+  + +D  P
Sbjct: 503 FEEMRQQDTKP 513



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 37/353 (10%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTI-VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
           F++L+     K  LQ GR +H Q I + ++ S + +ANSL++ YAKC    +AK +F  +
Sbjct: 11  FNSLVQFTHQK-SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRI 69

Query: 337 SHISTVPWTAMISAYVQKGNLEEA--LNLFIEMCRANISADQATFASILRASAELASLSL 394
            +   + W  +I+ Y Q+G    +  + LF  M   NI  +  TF+ I  A++ L+S+  
Sbjct: 70  HNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFF 129

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+Q H+  I+     +VF GS+LL+MY K+G L +A + F  MPERN V+W  +IS  A 
Sbjct: 130 GQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAI 189

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQYFNSM 503
              A    + FE M +     +  +  SVLSA +           HC  ++ GL  F S+
Sbjct: 190 QRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSI 249

Query: 504 -----------------TQKYKLRPKKEH--YASMVDILCRSGCFDEAEKLMAQMPF--- 541
                             Q +++   K    +++M+    +SG   +A KL ++M F   
Sbjct: 250 LNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGI 309

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            P E     V+N+C     +E  K+  + L K+          A+ ++YA +G
Sbjct: 310 NPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSG 362


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/593 (36%), Positives = 337/593 (56%), Gaps = 38/593 (6%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL--FGEMPEVDGVSYNVMITCYA 251
           +QVHA +++    +  +V   L+ + +K D  + +  L  FG++   +   +  MI  YA
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEV 310
                 ES   +  ++        F FS L       L++ +G+Q+H QTI+     S++
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 311 KVANSLVDMYAKCG-------------------------------RFEEAKEIFANLSHI 339
            V NS++D+Y KCG                                 E A  +F +L   
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
             V WTAM++ Y Q G  +EAL  F +M    +  D+ T A ++ A A+L ++     + 
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298

Query: 400 SFVIRSGF--MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
               RSGF    NV  GSAL+DMY+K GS  +A + F+ M ERN+ S++++I   A +G 
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGR 358

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           A + L+ F DM+++  +P+ V+ + +LSACSH GL+E+G Q F  M + + + P  +HYA
Sbjct: 359 AHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYA 418

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            MVD+L R+GC +EA  L+  MP EP+  +W +++ +CRIH N + A+ AA++LFK+E  
Sbjct: 419 CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP- 477

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS-KVHVFTANDELH 636
                Y+ +SNIYA AG+WE VS+++K +RE+G +K    SW E K+ ++H F A D  H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
           P+++EIR+ ++ L++ ++  GYKP+   A +D  ++ K   L  HSE+LA+A+ L+ T  
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G  I +MKN+R C DCH  +   S+ITGREI VRD+ RFHHF +G CSC +FW
Sbjct: 598 GDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 193/411 (46%), Gaps = 48/411 (11%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL--DLARRVFKEMPQKDSVSFNALIT 147
           +++ QVHA II+ G +    +   L+    K+          VF ++   +   + A+I 
Sbjct: 56  SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 115

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA-FVVKTNFV 206
           G+A +GL  E+   +  M+  G  P  FTF+A   A     ++ LG+QVHA  ++   F 
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEM------------------------------- 235
            +++V N+++DLY K   +  ARK+F EM                               
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
           P  D V++  M+T YA N + KE+L+ F+++Q    +  +   + ++S  A     Q+G 
Sbjct: 236 PSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA-----QLGA 290

Query: 296 QIHTQTIVTTA-------ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             H   I   A          V V ++L+DMY+KCG  +EA ++F  +   +   +++MI
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGF 407
             Y   G    AL LF +M +  I  ++ TF  IL A +    +  G+QL + + +  G 
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
             +    + ++D+  ++G L++A+   K MP E N   W AL+ AC  +G+
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 163/360 (45%), Gaps = 51/360 (14%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           WT +I GY+ +    E+   +  MR D G  P   TF+ L   C      +   QVHA  
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168

Query: 100 IKF-GYNSILIICNSLVDSYCKIRCLDLARRVFKEM------------------------ 134
           I   G+ S L + NS++D Y K   L  AR+VF EM                        
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228

Query: 135 -------PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
                  P KD V++ A++TG+A+ G  +EA++ F +MQ +G +  + T A  +SA   L
Sbjct: 229 SGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288

Query: 188 ADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             +     +     ++ F    NV V +AL+D+YSK     EA K+F  M E +  SY+ 
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT--QTIV 303
           MI  YA + +   +L+LF ++  T    ++  F  +LS  ++   ++ GRQ+    +   
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFF 408

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMISAYVQKGN 356
             A S    A  +VD+  + G  EEA ++      + T+P       W A++ A    GN
Sbjct: 409 GVAPSPDHYA-CMVDLLGRAGCLEEALDL------VKTMPMEPNGGVWGALLGACRIHGN 461



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 15/256 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   LI  Y K G++ +A  LF+ +  +  V+WT ++ GY+Q  + +EA + F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYF 263

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-------FGYNSILIICNS 113
             M+ D G + D VT A ++S C++          HA+ I+       FG +  +++ ++
Sbjct: 264 QKMQ-DVGMETDEVTLAGVISACAQLGAVK-----HANWIRDIAERSGFGPSGNVVVGSA 317

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           L+D Y K    D A +VF+ M +++  S++++I G+A  G    A++LF +M     +P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLF 232
             TF   LSA      +  GRQ+ A + K   V       A ++DL  +  C+ EA  L 
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV 437

Query: 233 GEMP-EVDGVSYNVMI 247
             MP E +G  +  ++
Sbjct: 438 KTMPMEPNGGVWGALL 453


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/480 (42%), Positives = 301/480 (62%), Gaps = 5/480 (1%)

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC----GRFEEA 329
           ++F +  +L   A   +L +G+ +H   +      EV V N+LV MY  C    G  E A
Sbjct: 9   NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFA 68

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +++F  +    +V W+AMI  YV+ G   +A+NLF EM    +  D+ T  S+L A   L
Sbjct: 69  RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            +L LGK + S+V +     NV   +AL+DM+AK G +  A   F+ M ERNIVSW ++I
Sbjct: 129 GALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVI 188

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              A +G     +  FE+MV+SG  PD V  + +LSACSH GL+++G +YF+SM + + +
Sbjct: 189 GGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSI 248

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            PK EHY  MVD+LCR+G   EA K + +MP +P+ ++W ++IN+CR H  L+  +K   
Sbjct: 249 VPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITR 308

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           QL + E + ++  YV +SNIYA    WE  +++++AM  +G++K+   + +EL ++++ F
Sbjct: 309 QLIRNEPMHESN-YVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEF 367

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
            A D+ H Q+ EI   ++ + +EMK+ GY P T+  L D D+E K ++L  HSE+LAIAF
Sbjct: 368 VAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAF 427

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           AL+NTP G+ I ++KNLR C DCH+A K ISKI  REI VRD +RFHHFK+G CSCRDFW
Sbjct: 428 ALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 158/307 (51%), Gaps = 8/307 (2%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY----SKHDCVVE 227
           P+ FT+   L A  G+ ++ LG+ VH  V+K  F + V V N L+ +Y         +  
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           ARK+F EM + D VS++ MI  Y    +  +++ LFRE+Q       +    ++LS    
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L++G+ + +          V+++N+L+DM+AKCG  ++A  +F ++   + V WT++
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I      G   EA+ +F EM R+ ++ D   F  +L A +    +  GK+     +R  F
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD-SMRKDF 246

Query: 408 --MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKS 464
             +  +     ++DM  ++G +K+A++  +EMP + N V W  LI+AC  +G+ +   K 
Sbjct: 247 SIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKI 306

Query: 465 FEDMVQS 471
              ++++
Sbjct: 307 TRQLIRN 313



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 200/433 (46%), Gaps = 58/433 (13%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC----LDL 126
           P+  T+  +L  C+     N    VH  ++KFG+   + + N+LV  YC  R     ++ 
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR+VF EM + DSVS++A+I G+ + G + +AI LF EMQ  G  P + T  + LSA  G
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L  + LG+ V ++V K    +NV ++NAL+D+++K   V +A  LF  M E + VS+  +
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I   A + +  E++ +F E+  +        F  LLS  ++                   
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSH------------------- 228

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
                  + LVD   +   F+  ++ F+ +  I    +  M+    + G ++EAL    E
Sbjct: 229 -------SGLVDKGKR--YFDSMRKDFSIVPKIEH--YGCMVDMLCRAGLVKEALKFVQE 277

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG--------FMSNVFSGSALL 418
           M    I  +   + +++ A      L LG+++   +IR+          +SN++   A +
Sbjct: 278 M---PIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIY---AKM 331

Query: 419 DMYAKSGSLKDA--IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV------- 469
             + K   +++A  ++  K++P   ++  +  I        + A  K   +MV       
Sbjct: 332 SDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEM 391

Query: 470 -QSGYQPDSVSLL 481
            ++GY P +  +L
Sbjct: 392 KRAGYMPTTTEVL 404



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 150/347 (43%), Gaps = 38/347 (10%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           QNT+  +M        G +  AR++F+ M    +VSW+ +IGGY +  +  +A  LF +M
Sbjct: 48  QNTL-VHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREM 106

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           +  G   PD +T  ++LS C+          V + + K      + + N+L+D + K   
Sbjct: 107 QIKGVC-PDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGD 165

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A  +F+ M +++ VS+ ++I G A  G   EA+ +F EM   G  P D  F   LSA
Sbjct: 166 VDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSA 225

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 +  G++                                 RK F  +P+++   Y
Sbjct: 226 CSHSGLVDKGKRYFD----------------------------SMRKDFSIVPKIE--HY 255

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
             M+         KE+LK  +E+     D +   + TL++      +L++G +I  Q I 
Sbjct: 256 GCMVDMLCRAGLVKEALKFVQEMP---IDPNPVVWRTLINACRAHGELKLGEKITRQLIR 312

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEI--FANLSHISTVPWTAMI 348
              + E      L ++YAK   +E+   I    ++  +  +P + MI
Sbjct: 313 NEPMHESNYV-LLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMI 358


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/664 (33%), Positives = 368/664 (55%), Gaps = 43/664 (6%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALS 182
           LD A +VF ++P+ +  ++N LI  FA      + + +F++M H   + P+ +TF   + 
Sbjct: 80  LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   ++ +  G+ +H  V+K +F  ++F++N+L+  YS    +  A  +F ++ E D VS
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR----QIH 298
           +N MI+ +      +E+L+LF+ ++      ++     +LS  A ++DL+ GR     I 
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
              I    I    ++N+++DMY KCG  E+A+ +F  +     V WT MI  Y + G+ +
Sbjct: 260 RNGIDINLI----LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315

Query: 359 EALNLFIEMCRANISA--------------------------------DQATFASILRAS 386
            A  +F  M R +I+A                                ++ T AS L A 
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A+L ++ LG  +H ++ + G   N    ++L+DMY+K G L+ A++ F  +  R++  W+
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           A+I+  A +G  +A +  F  M ++  +P++V+  ++L ACSH GL++EG  +FN M   
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           Y + P  +HYA MVDIL R+GC +EA +L+ +MP  P   +W +++ +CRI+ N+E A+ 
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEM 555

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
           A  +L + +     A YV +SNIYA AG+W+ VS++++ M+  G+ K    S +E+   +
Sbjct: 556 ACSRLLETDSNNHGA-YVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGII 614

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH-DEDEEIKVESLKYHSERL 685
           H F   D  HP + EI  K++ ++  +K  GY  D S  L   E+E +K  +L  HSE+L
Sbjct: 615 HEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKL 674

Query: 686 AIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           AIA+ LI      PI ++KNLR C DCH+  KLISK+  R+I +RD  RFHHF  G CSC
Sbjct: 675 AIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSC 734

Query: 746 RDFW 749
            D+W
Sbjct: 735 MDYW 738



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 226/476 (47%), Gaps = 40/476 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           +L  A ++F+ +      +W  LI  ++   +  +   +F+ M  +    P+  TF  ++
Sbjct: 79  SLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVI 138

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSV 140
              +E  +      +H  ++K  + S L I NSL+  Y  +  LD A  VF ++ +KD V
Sbjct: 139 KAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198

Query: 141 SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFV 200
           S+N++I+GF + G  EEA++LF  M+    +P+  T    LSA     D+  GR    ++
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258

Query: 201 VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY---------- 250
            +     N+ ++NA+LD+Y K   + +AR+LF +M E D VS+  MI  Y          
Sbjct: 259 ERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAAR 318

Query: 251 ------------AWNE---------QYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANK 288
                       AWN          + KE+L +FRELQ  +  + ++   ++ L+  A  
Sbjct: 319 RVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL 378

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             + +G  IH             +  SL+DMY+KCG  E+A E+F ++       W+AMI
Sbjct: 379 GAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMI 438

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           +     G+   A++LF +M    +  +  TF ++L A +    +  G+    F  +   +
Sbjct: 439 AGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRL---FFNQMRPV 495

Query: 409 SNVFSGS----ALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
             V  GS     ++D+  ++G L++A++  ++MP     S W AL+ AC   G+ +
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVE 551



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 207/437 (47%), Gaps = 52/437 (11%)

Query: 194 RQVHAFVVKTNF------VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           +Q+HA +++T           +F A AL    S    +  A K+F ++P  +  ++N +I
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFDQIPRPNLYTWNTLI 102

Query: 248 TCYAWNEQYKESLKLFREL--QFTRFDRS-QFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             +A + +  + L +F ++  +  RF  S  FPF  ++        L  G+ IH   +  
Sbjct: 103 RAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPF--VIKAATEVSSLLAGQAIHGMVMKA 160

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
           +  S++ ++NSL+  Y+  G  + A  +F+ +     V W +MIS +VQ G+ EEAL LF
Sbjct: 161 SFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF 220

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M   N   ++ T   +L A A+   L  G+    ++ R+G   N+   +A+LDMY K 
Sbjct: 221 KRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKC 280

Query: 425 GSLKDAIQTFKEMPERNIVS-------------------------------WNALISACA 453
           GSL+DA + F +M E++IVS                               WNALIS+  
Sbjct: 281 GSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQ 340

Query: 454 QNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
           QNG  +  L  F ++ +    +P+ V+L S L+AC+  G ++ G  + +   +K  ++  
Sbjct: 341 QNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG-GWIHVYIKKQGIKLN 399

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
                S++D+  + G  ++A ++   +    D  +WS++I    +H +    + A D   
Sbjct: 400 FHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGH---GRAAIDLFS 455

Query: 573 KMEKLRDAAPYVAMSNI 589
           KM++ +     V  +N+
Sbjct: 456 KMQETKVKPNAVTFTNL 472



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 186/386 (48%), Gaps = 35/386 (9%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI  Y   G+L +A  +F+ +V++  VSW  +I G+ Q     EA +LF  M+ +  
Sbjct: 169 SNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME-N 227

Query: 69  SDPDYVTFATLLSGCSE------PDTANELIQVHA-DIIKFGYNSIL---IICNSL---- 114
           + P+ VT   +LS C++         A + I+ +  DI     N++L   + C SL    
Sbjct: 228 ARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDAR 287

Query: 115 -----------------VDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE 157
                            +D Y K+   D ARRVF  MP++D  ++NALI+ + + G  +E
Sbjct: 288 RLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKE 347

Query: 158 AIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
           A+ +F E+Q +   KP++ T A+ L+A   L  + LG  +H ++ K     N  +  +L+
Sbjct: 348 ALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLI 407

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+YSK   + +A ++F  +   D   ++ MI   A +   + ++ LF ++Q T+   +  
Sbjct: 408 DMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAV 467

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQT-IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
            F+ LL   ++   +  GR    Q   V   +   K    +VD+  + G  EEA E+   
Sbjct: 468 TFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEK 527

Query: 336 LSHISTVP-WTAMISAYVQKGNLEEA 360
           +  + +   W A++ A    GN+E A
Sbjct: 528 MPIVPSASVWGALLGACRIYGNVELA 553



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 7/246 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   +I GY K G+   AR +F+ M      +W  LI  Y Q  + +EA  +F
Sbjct: 293 MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +++ +  + P+ VT A+ L+ C++    +    +H  I K G      I  SL+D Y K
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A  VF  + ++D   ++A+I G A  G    AI LF +MQ    KP+  TF   
Sbjct: 413 CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNL 472

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVAN----ALLDLYSKHDCVVEARKLFGEMP 236
           L A      +  GR    F  +   V  V   +     ++D+  +  C+ EA +L  +MP
Sbjct: 473 LCACSHSGLVDEGR---LFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMP 529

Query: 237 EVDGVS 242
            V   S
Sbjct: 530 IVPSAS 535


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/593 (36%), Positives = 337/593 (56%), Gaps = 38/593 (6%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL--FGEMPEVDGVSYNVMITCYA 251
           +QVHA +++    +  +V   L+ + +K D  + +  L  FG++   +   +  MI  YA
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEV 310
                 ES   +  ++        F FS L       L++ +G+Q+H QTI+     S++
Sbjct: 119 LQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDL 178

Query: 311 KVANSLVDMYAKCG-------------------------------RFEEAKEIFANLSHI 339
            V NS++D+Y KCG                                 E A  +F +L   
Sbjct: 179 YVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
             V WTAM++ Y Q G  +EAL  F +M    +  D+ T A ++ A A+L ++     + 
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298

Query: 400 SFVIRSGF--MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
               RSGF    NV  GSAL+DMY+K GS  +A + F+ M ERN+ S++++I   A +G 
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGR 358

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
           A + L+ F DM+++  +P+ V+ + +LSACSH GL+E+G Q F  M + + + P  +HYA
Sbjct: 359 AHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYA 418

Query: 518 SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL 577
            MVD+L R+GC +EA  L+  MP EP+  +W +++ +CRIH N + A+ AA++LFK+E  
Sbjct: 419 CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP- 477

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS-KVHVFTANDELH 636
                Y+ +SNIYA AG+WE VS+++K +RE+G +K    SW E K+ ++H F A D  H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537

Query: 637 PQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE 696
           P+++EIR+ ++ L++ ++  GYKP+   A +D  ++ K   L  HSE+LA+A+ L+ T  
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597

Query: 697 GSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           G  I +MKN+R C DCH  +   S+ITGREI VRD+ RFHHF +G CSC +FW
Sbjct: 598 GDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 48/411 (11%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL--DLARRVFKEMPQKDSVSFNALIT 147
           +++ QVHA II+ G +    +   L+    K+          VF ++   +   + A+I 
Sbjct: 56  SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIR 115

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA-FVVKTNFV 206
           G+A +GL  E+   +  M+  G  P  FTF+A   A     ++ LG+QVHA  ++   F 
Sbjct: 116 GYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFA 175

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN---------------------- 244
            +++V N+++DLY K   +  ARK+F EM E D VS+                       
Sbjct: 176 SDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDL 235

Query: 245 ---------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
                     M+T YA N + KE+L+ F+++Q    +  +   + ++S  A     Q+G 
Sbjct: 236 PLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA-----QLGA 290

Query: 296 QIHTQTIVTTA-------ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
             H   I   A          V V ++L+DMY+KCG  +EA ++F  +   +   +++MI
Sbjct: 291 VKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGF 407
             Y   G    AL LF +M +  I  ++ TF  IL A +    +  G+QL + + +  G 
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
             +    + ++D+  ++G L++A+   K MP E N   W AL+ AC  +G+
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 163/360 (45%), Gaps = 51/360 (14%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           WT +I GY+ +    E+   +  MR D G  P   TF+ L   C      +   QVHA  
Sbjct: 110 WTAMIRGYALQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168

Query: 100 IKF-GYNSILIICNSLVDSYCKIRCLDLARRVFKEM------------------------ 134
           I   G+ S L + NS++D Y K   L  AR+VF EM                        
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228

Query: 135 -------PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
                  P KD V++ A++TG+A+ G  +EA++ F +MQ +G +  + T A  +SA   L
Sbjct: 229 SGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288

Query: 188 ADIALGRQVHAFVVKTNFVE--NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             +     +     ++ F    NV V +AL+D+YSK     EA K+F  M E +  SY+ 
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT--QTIV 303
           MI  YA + +   +L+LF ++  T    ++  F  +LS  ++   ++ GRQ+    +   
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFF 408

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMISAYVQKGN 356
             A S    A  +VD+  + G  EEA ++      + T+P       W A++ A    GN
Sbjct: 409 GVAPSPDHYA-CMVDLLGRAGCLEEALDL------VKTMPMEPNGGVWGALLGACRIHGN 461



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 15/256 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   LI  Y K G++ +A  LF+ +  +  V+WT ++ GY+Q  + +EA + F
Sbjct: 204 MSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYF 263

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-------FGYNSILIICNS 113
             M+ D G + D VT A ++S C++          HA+ I+       FG +  +++ ++
Sbjct: 264 QKMQ-DVGMETDEVTLAGVISACAQLGAVK-----HANWIRDIAERSGFGPSGNVVVGSA 317

Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           L+D Y K    D A +VF+ M +++  S++++I G+A  G    A++LF +M     +P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLF 232
             TF   LSA      +  GRQ+ A + K   V       A ++DL  +  C+ EA  L 
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV 437

Query: 233 GEMP-EVDGVSYNVMI 247
             MP E +G  +  ++
Sbjct: 438 KTMPMEPNGGVWGALL 453


>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
          Length = 608

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/589 (35%), Positives = 342/589 (58%), Gaps = 34/589 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R+VHA ++K    +       L+  Y++   + +AR+ F + P  D   Y+ ++   + +
Sbjct: 21  RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHS 80

Query: 254 EQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
              +  L L R  L         F  ++L S       L++GRQ+H     +   ++  V
Sbjct: 81  SDPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVV 140

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY--------------------- 351
            +SL+DMY KCG  ++A+++F ++   ++V WTA+IS Y                     
Sbjct: 141 KSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL 200

Query: 352 ----------VQKGNLEEALNLFIEMCRANISADQA-TFASILRASAELASLSLGKQLHS 400
                     V+ GN   A+ LF+EM R +I    A   A+++  +A+LA+L LG+QLH 
Sbjct: 201 FTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHG 260

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           FV+R GF+S++  G+AL+DMY+K   +  A + F+ +  R+++SW  ++   AQ+G A+ 
Sbjct: 261 FVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEE 320

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
               +  M+ +G +P+ V+ + ++ ACSH GL+++G Q F+SM ++Y ++P  +HY   +
Sbjct: 321 VFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYL 380

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG   EAEKL+  MP+EPDE  W +++++C+ H + +   + AD L ++ + +D 
Sbjct: 381 DLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLEL-RPKDP 439

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           + Y+ +SN+YAV  +W+SV++V+K M E  +RKV  YSWVE   +  +F A +       
Sbjct: 440 STYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGE 499

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   +E L+ EM+K GY PDTS  +HD +E  K + L  HSERLA+AF ++ +P GS I
Sbjct: 500 EITCFLEELVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVI 559

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            V+KNLR C DCH  +K IS I  R+I VRD+SRFHHF+DG CSC +FW
Sbjct: 560 RVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 194/425 (45%), Gaps = 36/425 (8%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +VHA ++K G   +      LV +Y +   L  ARR F + P++D   ++AL+   +   
Sbjct: 22  RVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSS 81

Query: 154 LNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
             E  + L   M      +P  F  A+  SA   L  + LGRQ+HA    + +  +  V 
Sbjct: 82  DPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVK 141

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ----- 267
           ++L+D+Y K     +ARK+F  +   + V +  +I+ YA N    E+L LF+ +      
Sbjct: 142 SSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLF 201

Query: 268 ---------------------FTRFDRSQ------FPFSTLLSVVANKLDLQIGRQIHTQ 300
                                F    R        F  +T++   A+   L +GRQ+H  
Sbjct: 202 TWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGF 261

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +    +S + V N+LVDMY+KC     A+E+F  ++    + WT ++    Q G  EE 
Sbjct: 262 VMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEV 321

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
             L+  M  A +  ++ TF  ++ A +    +  G+QL   + R  G    V   +  LD
Sbjct: 322 FALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLD 381

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDS 477
           + ++SG L +A +    MP E +  +W AL+SAC ++ D Q  L+  +++++     P +
Sbjct: 382 LLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPST 441

Query: 478 VSLLS 482
             LLS
Sbjct: 442 YILLS 446



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 34/374 (9%)

Query: 11  MLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD 70
           +L+S Y +S  L  AR  F+    R    ++ L+   S  +       L   M +D    
Sbjct: 41  LLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALR 100

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           PD+   A+L S      +     Q+HA      Y++  ++ +SL+D YCK      AR+V
Sbjct: 101 PDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKV 160

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLF---------------------------- 162
           F  +  K+SV + ALI+G+A  G   EA+ LF                            
Sbjct: 161 FDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAM 220

Query: 163 ---VEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL 218
              VEM+    +  D F  A  +     LA + LGRQ+H FV++  F+ ++ V NAL+D+
Sbjct: 221 GLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDM 280

Query: 219 YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
           YSK   +  AR++F  +   D +S+  ++   A + + +E   L+  +       ++  F
Sbjct: 281 YSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTF 340

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS 337
             L+   ++   +Q GRQ+         +   V+     +D+ ++ G   EA+++   + 
Sbjct: 341 VGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMP 400

Query: 338 H-ISTVPWTAMISA 350
           +      W A++SA
Sbjct: 401 YEPDEATWGALLSA 414



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 2/247 (0%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+V    LISGY  +G    A +LF SM      +WT LI G+ +   +  A  LFV+M
Sbjct: 167 KNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEM 226

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R D     D    AT++ G ++        Q+H  +++ G+ S +I+ N+LVD Y K   
Sbjct: 227 RRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSD 286

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +  AR VF+ +  +D +S+  ++ G A+ G  EE   L+  M   G KP++ TF   + A
Sbjct: 287 IHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYA 346

Query: 184 GVGLADIALGRQV-HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGV 241
                 +  GRQ+  +   +      V      LDL S+   + EA KL   MP E D  
Sbjct: 347 CSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEA 406

Query: 242 SYNVMIT 248
           ++  +++
Sbjct: 407 TWGALLS 413


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/566 (38%), Positives = 331/566 (58%), Gaps = 12/566 (2%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF--------GEMPEVDGVSYNVM 246
           Q+HAF++KT    N  +        S  + +  A               P  D   +N +
Sbjct: 36  QIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTL 95

Query: 247 ITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           I  Y+     K  S   +R +       ++F F  +L   A    L++G+ +H   +   
Sbjct: 96  IRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFG 155

Query: 306 AISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
              +V V N+L+ MY   G   FE A+++F +   + TV W+AMI+ +V+ G    A++L
Sbjct: 156 FEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDL 215

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F EM    +  D+ T  S+L A A+L +L LGK + S+V +     +V   +AL+DM+AK
Sbjct: 216 FREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAK 275

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G++  AI+ F++M  R IVSW ++I+  A +G     +  F++MV++G  PD V+ + V
Sbjct: 276 CGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGV 335

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
           LSACSH GL+++G  YF SM + + + PK EHY  MVD+LCR G   EA + + +MPFEP
Sbjct: 336 LSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEP 395

Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
           ++I+W ++I +C     L+  +  + +L K E + ++  YV +SNIYA   QWE  ++V+
Sbjct: 396 NQIIWRTIITACHATGELKLGESISKELIKSEPMHESN-YVLLSNIYAKLRQWEKKTKVR 454

Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
           + M  RG++KV   + +E+ ++++ F A D+ H Q  EI   ++ + +E+KK GY P TS
Sbjct: 455 EMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTS 514

Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
             L D DEE K ++L  HSE+LAIAFAL+NTP G+ I ++KNLR C DCH+A K ISK+ 
Sbjct: 515 QVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVY 574

Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
            REI VRD +RFHHFK+G CSCRDFW
Sbjct: 575 NREIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 197/413 (47%), Gaps = 21/413 (5%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF--- 131
           T  TLL+  S  +T ++L Q+HA I+K G  +  +I      +   +  +  A       
Sbjct: 19  TILTLLN--SHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPP 76

Query: 132 -----KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVE-MQHLGFKPSDFTFAAALSAGV 185
                   P  D+  FN LI  +++   ++    LF   M   G  P+ FTF   L    
Sbjct: 77  SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCA 136

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-----ARKLFGEMPEVDG 240
           G+  + LG+ VH  VVK  F E+V V N L+ +Y    C+ E     A K+F + P++D 
Sbjct: 137 GIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC---CLGEDGFEFAEKVFDDSPKMDT 193

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V+++ MI  +        ++ LFRE+Q       +    ++LS  A+   L++G+ + + 
Sbjct: 194 VTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESY 253

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
                    V++ N+L+DM+AKCG  ++A ++F  +   + V WT++I+     G   +A
Sbjct: 254 VEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDA 313

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
           ++LF EM    I+ D   F  +L A +    +  G+     + R+   +  V     ++D
Sbjct: 314 VSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVD 373

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
           +  + G +K+A +  ++MP E N + W  +I+AC   G+ +      +++++S
Sbjct: 374 LLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKS 426



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 160/329 (48%), Gaps = 10/329 (3%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           A  +  LI  YSQ    +    LF       G  P+  TF  +L GC+   +      VH
Sbjct: 89  AFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVH 148

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRCL-----DLARRVFKEMPQKDSVSFNALITGFAK 151
             ++KFG+   + + N+L+  YC   CL     + A +VF + P+ D+V+++A+I GF +
Sbjct: 149 GCVVKFGFEEDVHVLNTLIHMYC---CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVR 205

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            G +  A+ LF EMQ +G  P + T  + LSA   L  + LG+ V ++V K N  ++V +
Sbjct: 206 LGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVEL 265

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            NAL+D+++K   V +A KLF +M     VS+  +I   A + +  +++ LF E+     
Sbjct: 266 CNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGI 325

Query: 272 DRSQFPFSTLLSVVANKLDLQIGR-QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
                 F  +LS  ++   +  GR    +     + + +V+    +VD+  + G  +EA 
Sbjct: 326 TPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAF 385

Query: 331 EIFANLS-HISTVPWTAMISAYVQKGNLE 358
           E    +    + + W  +I+A    G L+
Sbjct: 386 EFVQKMPFEPNQIIWRTIITACHATGELK 414



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 44/199 (22%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  + K GN+  A +LF  M  RT VSWT +I G +   +  +A  LF +M  + G 
Sbjct: 267 NALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEM-VENGI 325

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD V F  +LS CS           H+ ++                        D  R 
Sbjct: 326 TPDDVAFIGVLSACS-----------HSGLV------------------------DKGRY 350

Query: 130 VFKEMPQKDSV-----SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            F  M +  S+      +  ++    + G  +EA +    +Q + F+P+   +   ++A 
Sbjct: 351 YFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEF---VQKMPFEPNQIIWRTIITAC 407

Query: 185 VGLADIALGRQVHAFVVKT 203
               ++ LG  +   ++K+
Sbjct: 408 HATGELKLGESISKELIKS 426


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/632 (35%), Positives = 365/632 (57%), Gaps = 41/632 (6%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+   FA LL  C    +A     VHA I+   ++  + I N L+D Y K  CLD AR++
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 131 FKEMPQK-------------------------------DSVSFNALITGFAKEGLNEEAI 159
           F  MPQ+                               D  S+N++++GFA+    EE++
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
           + FV+M    F  ++++F +ALSA  GL D+ +G QVHA V K+ +  +V++ +AL+D+Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           SK   V  A ++F  M E + V++N +ITCY  N    E+L++F  +  +  +  +   +
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
           +++S  A+   L+ G QIH + + T     ++ + N+LVDMYAKC +  EA+ +F  +S 
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + V  T+M+S Y +  +++ A  +F +M + N+ +  A  A   +      +L L + L
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372

Query: 399 HS-------FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
                    +   +   S++F G++L+DMY K GS++D  + F++M ER+ VSWNA+I  
Sbjct: 373 KRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 432

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
            AQNG     L+ F  M+  G +PD V+++ VL ACSH GL+EEG  YF SM +++ L P
Sbjct: 433 YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIP 491

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQL 571
            K+HY  MVD+L R+GC +EA+ L+  MP  PD ++W S++ +C++H N+E  K AA++L
Sbjct: 492 LKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKL 551

Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTA 631
            +++   ++ PYV +SN+YA  G+W  V +V+K MR++GV K    SW+E++S+VHVF  
Sbjct: 552 LEIDPW-NSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLV 610

Query: 632 NDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
            D+ HP   +I   ++ L ++MK+ GY PD +
Sbjct: 611 KDKSHPHRKQIYSVLKMLTEQMKRVGYIPDAN 642



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 242/503 (48%), Gaps = 58/503 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +NT + N LIS   KSG L  A  LF SM +    SW  ++ G++Q ++F E+ + F
Sbjct: 76  MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V M  +     +Y +F + LS C+     N   QVHA + K  Y++ + + ++L+D Y K
Sbjct: 136 VKMHREDFLLNEY-SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +  A  VF  M +++ V++N+LIT + + G   EA+++FV M   G +P + T A+ 
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254

Query: 181 LSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARK--------- 230
           +SA   L  +  G Q+HA VVKTN F +++ + NAL+D+Y+K   V EAR+         
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 231 ----------------------LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                                 +F +M + + VS+N +I  Y  N + +E+L+LFR L+ 
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                + + F  LL                         S++ V NSL+DMY KCG  E+
Sbjct: 375 ESIWPTHYTFGNLLK------------------------SDIFVGNSLIDMYMKCGSIED 410

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
              +F  +     V W A+I  Y Q G   EAL +F +M       D  T   +L A + 
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSH 470

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
              +  G+     +   G +      + ++D+  ++G L +A    + MP   + V W +
Sbjct: 471 AGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 530

Query: 448 LISACAQNGDAQATLKSFEDMVQ 470
           L++AC  +G+ +    + E +++
Sbjct: 531 LLAACKVHGNIEMGKHAAEKLLE 553


>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
 gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g52630
 gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
          Length = 588

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/559 (39%), Positives = 347/559 (62%), Gaps = 6/559 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+H +VVK+       VAN L++ YSK     ++R+ F + P+    +++ +I+C+A 
Sbjct: 34  GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93

Query: 253 NEQYKESLKLFRELQFT--RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           NE    SL+  +++     R D    P +T    + ++ D  IGR +H  ++ T   ++V
Sbjct: 94  NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD--IGRSVHCLSMKTGYDADV 151

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V +SLVDMYAKCG    A+++F  +   + V W+ M+  Y Q G  EEAL LF E    
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N++ +  +F+S++   A    L LG+Q+H   I+S F S+ F GS+L+ +Y+K G  + A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            Q F E+P +N+  WNA++ A AQ+   Q  ++ F+ M  SG +P+ ++ L+VL+ACSH 
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL++EG  YF+ M +  ++ P  +HYAS+VD+L R+G   EA +++  MP +P E +W +
Sbjct: 332 GLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ SC +HKN E A  AAD++F++  +  +  ++++SN YA  G++E  ++ +K +R+RG
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPV-SSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
            +K T  SWVE ++KVH F A +  H ++ EI  K+  L +EM+K GY  DTS  L + D
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            + K ++++YHSERLAIAF LI  P   PI VMKNLR C DCH AIK +S  T R I VR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFH F+DG CSC D+W
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 209/382 (54%), Gaps = 1/382 (0%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +Y     LL   +   +  + +Q+H  ++K G + I ++ N+L++ Y K +    +RR F
Sbjct: 14  NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           ++ PQK S +++++I+ FA+  L   +++   +M     +P D    +A  +   L+   
Sbjct: 74  EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +GR VH   +KT +  +VFV ++L+D+Y+K   +V ARK+F EMP+ + V+++ M+  YA
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              + +E+L LF+E  F     + + FS+++SV AN   L++GRQIH  +I ++  S   
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V +SLV +Y+KCG  E A ++F  +   +   W AM+ AY Q  + ++ + LF  M  + 
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  +  TF ++L A +    +  G+     +  S         ++L+DM  ++G L++A+
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373

Query: 432 QTFKEMPERNIVS-WNALISAC 452
           +    MP     S W AL+++C
Sbjct: 374 EVITNMPIDPTESVWGALLTSC 395



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 3/180 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y K G +  AR++F+ M  R  V+W+ ++ GY+Q  +  EA  LF +   +  +  
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           DY +F++++S C+         Q+H   IK  ++S   + +SLV  Y K    + A +VF
Sbjct: 217 DY-SFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
            E+P K+   +NA++  +A+    ++ I+LF  M+  G KP+  TF   L+A    GL D
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L +SA   S   G QLH +V++SG        + L++ Y+KS    D+ + F++ P+++
Sbjct: 21  LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
             +W+++IS  AQN     +L+  + M+    +PD   L S   +C+     + G +  +
Sbjct: 81  STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG-RSVH 139

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            ++ K          +S+VD+  + G    A K+  +MP + + + WS ++
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMM 189



 Score = 43.1 bits (100), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G    A ++FN +  +    W  ++  Y+Q +  ++  +LF  M+  G   P
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKP 316

Query: 72  DYVTFATLLSGCSEPDTANE 91
           +++TF  +L+ CS     +E
Sbjct: 317 NFITFLNVLNACSHAGLVDE 336


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/582 (36%), Positives = 342/582 (58%), Gaps = 41/582 (7%)

Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE--EAIKLFVEMQHLG 169
           N+L+ +Y ++   D AR +F+ +P  D  S+NA++   A+ G     +A++    M    
Sbjct: 87  NALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADD 146

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
           F  + ++FA+ALSA     D+  G QVH  V ++   ++V +  AL+D+Y+K +  V+AR
Sbjct: 147 FVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDAR 206

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           ++F  MPE + VS+N +ITCY  N    E+L LF E+  T F   +   S+++S  A   
Sbjct: 207 RVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLA 266

Query: 290 DLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGR----------------------- 325
             + GRQ+H   +    +  ++ + N+LVDMYAKCGR                       
Sbjct: 267 AEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSIL 326

Query: 326 --------FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
                    E+A+ +F+ +   + + W  +I+AY Q G  EEA+ LF+++ R +I     
Sbjct: 327 AGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHY 386

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFM------SNVFSGSALLDMYAKSGSLKDAI 431
           T+ ++L A   +A L LG+Q H  V++ GF       S+VF G++L+DMY K+GS+ D  
Sbjct: 387 TYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 446

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F+ M  R+ VSWNA+I   AQNG A+  L  FE M+ S   PDSV+++ VLSAC H G
Sbjct: 447 KVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG ++F+ MT+ + + P ++HY  MVD+L R+G   EAE+L+  MP EPD ++W+S+
Sbjct: 507 LVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASL 566

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+HKN+E  ++ A +LF+++   ++ PYV +SN+YA  G+W  V +V+++M++RGV
Sbjct: 567 LGACRLHKNVELGERTAGRLFELDP-ENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGV 625

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
            K    SW+E+ SK++VF A D  HP  NEI   +  +  EM
Sbjct: 626 SKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 249/499 (49%), Gaps = 53/499 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ--KNQFREAFK 58
           +P +NT S N L+S Y + G    AR LF ++ D    S+  ++   ++  +    +A +
Sbjct: 78  IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALR 137

Query: 59  LFVDMRTDGGSDPDYV----TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
               M  D     D+V    +FA+ LS C+         QVH  + +  +   + I  +L
Sbjct: 138 FLAAMHAD-----DFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTAL 192

Query: 115 VDSYCKI-RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
           VD Y K  R +D ARRVF  MP+++ VS+N+LIT + + G   EA+ LFVEM   GF P 
Sbjct: 193 VDMYAKCERPVD-ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPD 251

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLF 232
           + T ++ +SA  GLA    GRQVHA +VK + + +++ + NAL+D+Y+K     EAR +F
Sbjct: 252 EVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311

Query: 233 GEMP-------------------------------EVDGVSYNVMITCYAWNEQYKESLK 261
             MP                               E + +++NV+I  YA N + +E+++
Sbjct: 312 DSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT------TAISEVKVANS 315
           LF +L+      + + +  +L+   N   LQ+G+Q H   +           S+V V NS
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNS 431

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMY K G  ++  ++F  ++    V W AMI  Y Q G  ++AL+LF  M  +N + D
Sbjct: 432 LVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPD 491

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
             T   +L A      +  G++   F+    G   +    + ++D+  ++G LK+A +  
Sbjct: 492 SVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELI 551

Query: 435 KEMP-ERNIVSWNALISAC 452
           K+MP E + V W +L+ AC
Sbjct: 552 KDMPTEPDSVLWASLLGAC 570



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 71/429 (16%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R  H  V+K+      F+ N L+  Y++   + EAR++F  +P  +  SYN +++ YA  
Sbjct: 37  RAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARL 96

Query: 254 EQYKESLKLFRELQ-------------FTRFDRSQ--------------------FPFST 280
            +  E+  LF  +                R  R                      + F++
Sbjct: 97  GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFAS 156

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
            LS  A + DL+ G Q+H     +    +V +  +LVDMYAKC R  +A+ +F  +   +
Sbjct: 157 ALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W ++I+ Y Q G + EAL LF+EM       D+ T +S++ A A LA+   G+Q+H+
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHA 276

Query: 401 FVI-RSGFMSNVFSGSALLDMYAKSG-------------------------------SLK 428
            ++ R     ++   +AL+DMYAK G                               +++
Sbjct: 277 HMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVE 336

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F +M E+N+++WN LI+A AQNG+ +  ++ F  + +    P   +  +VL+AC 
Sbjct: 337 DAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACG 396

Query: 489 HCGLIEEGLQYFNSMTQ---KYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEP 543
           +  +++ G Q    + +   ++   P+ + +   S+VD+  ++G  D+  K+  +M    
Sbjct: 397 NIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR- 455

Query: 544 DEIMWSSVI 552
           D + W+++I
Sbjct: 456 DNVSWNAMI 464



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 141/301 (46%), Gaps = 36/301 (11%)

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           R+  P + LL    +   L   R  H   + +    E  + N+LV  YA+ GR  EA+ +
Sbjct: 18  RASSPLADLLRSAPS---LPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRV 74

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLF-----IEMCRAN---------------- 371
           F  +   +T  + A++SAY + G  +EA  LF      + C  N                
Sbjct: 75  FDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGD 134

Query: 372 -------ISADQ-----ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
                  + AD       +FAS L A A    L  G+Q+H  V RS    +V  G+AL+D
Sbjct: 135 ALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVD 194

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK     DA + F  MPERN+VSWN+LI+   QNG     L  F +M+ +G+ PD V+
Sbjct: 195 MYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVT 254

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
           L SV+SAC+      EG Q    M ++ +LR       ++VD+  + G   EA  +   M
Sbjct: 255 LSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314

Query: 540 P 540
           P
Sbjct: 315 P 315


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/730 (32%), Positives = 381/730 (52%), Gaps = 69/730 (9%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG- 67
           TN LI  Y+K  +L  A ++F+ M  R  VSW  ++ GY+ +     A KLF  M   G 
Sbjct: 80  TNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGC 139

Query: 68  -------------GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG----------- 103
                        G+  D  TFA +L  CS  +     IQ+H   +K G           
Sbjct: 140 GVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSAL 199

Query: 104 ------------------------------------------YNSILIICNSLVDSYCKI 121
                                                     + + ++I  + +D Y K 
Sbjct: 200 LDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKC 259

Query: 122 RCL-DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             L D + ++F  +P  +  S+NA+I G+A+     EA+ +F  +Q  G    + + + A
Sbjct: 260 NNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGA 319

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             A   +     G QVH   +K+    N+ VANA+LD+Y K   +VEA  +F EM   D 
Sbjct: 320 XRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 379

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  +  N   +++L LF  +  +  +  +F + ++L   A    L  G +IH +
Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 439

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +    +  V  +L+DMY+KCG  E+A+++   L+  + V W A+IS +  +   EEA
Sbjct: 440 IIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 499

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
              F +M    +  D  T+A+IL   A L ++ LGKQ+H+ +I+    S+ +  S L+DM
Sbjct: 500 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 559

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K G+++D    F++ P R+ V+WNA++   AQ+G  +  LK FE M     +P+  + 
Sbjct: 560 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 619

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           L+VL AC H GL+E+GL YF+SM   Y L P+ EHY+ +VDI+ RSG   +A +L+  MP
Sbjct: 620 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 679

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FE D ++W ++++ C+IH N+E A+KAA  + ++E   D+A YV +SNIYA AG W  V+
Sbjct: 680 FEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEP-EDSAAYVLLSNIYANAGMWNEVT 738

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++K MR  G++K    SW+E+KS+VH F   D+ HP++ EI   ++ L  EMK  GY P
Sbjct: 739 KLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMP 798

Query: 661 DTSCALHDED 670
           DT   L+D++
Sbjct: 799 DTDFILNDDE 808



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/580 (27%), Positives = 271/580 (46%), Gaps = 81/580 (13%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ +   CS+        Q HA +I   +   + + N L+  Y K   L  A +VF  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG---FKPSDF------------TFAA 179
           PQ+D+VS+NA++ G+A  G    A KLF  M   G    +  DF            TFA 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE------ARKLFG 233
            L +   L D   G Q+H   VK  F  +V   +ALLD+Y+K  C V+        +LF 
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK--CCVQNDDLRGGLELFK 221

Query: 234 EM--------------------------------------------------PEVDGVSY 243
           EM                                                  P  +  SY
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTI 302
           N +I  YA +++  E+L +FR LQ +     +   S      A  K DL+ G Q+H  ++
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSM 340

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +   S + VAN+++DMY KCG   EA  +F  +     V W A+I+A+ Q GN E+ L+
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF+ M ++ +  D+ T+ S+L+A A   +L+ G ++H+ +I+S    + F G AL+DMY+
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYS 460

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G ++ A +    + E+ +VSWNA+IS  +    ++   K+F  M++ G  PD+ +  +
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L  C++   +E G Q    + +K +L+      +++VD+  + G   + + +  + P  
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-N 578

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            D + W++++     H   E A K    +F+  +L +  P
Sbjct: 579 RDFVTWNAMVCGYAQHGLGEEALK----IFEYMQLENVKP 614



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 180/360 (50%), Gaps = 7/360 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N ++  Y K G L  A  +F  MV R AVSW  +I  + Q     +   LFV M 
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWM- 405

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIR 122
              G +PD  T+ ++L  C+     N  +++H  IIK   G +S + I  +L+D Y K  
Sbjct: 406 LQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCG 463

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A ++   + ++  VS+NA+I+GF+ +  +EEA K F +M  +G  P +FT+A  L 
Sbjct: 464 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 523

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
               L  + LG+Q+HA ++K     + ++++ L+D+YSK   + + + +F + P  D V+
Sbjct: 524 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVT 583

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N M+  YA +   +E+LK+F  +Q      +   F  +L    +   ++ G       +
Sbjct: 584 WNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSML 643

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
               +  +++  + +VD+  + G+  +A E+   +      V W  ++S     GN+E A
Sbjct: 644 SNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/682 (34%), Positives = 353/682 (51%), Gaps = 71/682 (10%)

Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
           K  +S    I  F+K       I++F  M   G  P        +     L+ +  G+Q+
Sbjct: 37  KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96

Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-------------------- 236
           H F + +    +  V ++LL +Y + D + +AR +F ++P                    
Sbjct: 97  HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156

Query: 237 ---------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
                          E++ VS+N MI+ +  +  Y +++ +F+ +            S++
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSV 216

Query: 282 LSVVANKLDLQI-GRQIHTQTIVTTAISEVKVANSLVDMYAKC----------------- 323
           L  V + LD+ + G QIH   I      +  V ++L+DMY KC                 
Sbjct: 217 LPAVGD-LDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVD 275

Query: 324 --------------GRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEM 367
                         G  + A E+F       ++ V WT+MI++  Q G   EAL LF EM
Sbjct: 276 VGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM 335

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               +  +  T   +L A   +A+L  GK  H F +R+G  ++V+ GSAL+DMYAK G +
Sbjct: 336 QIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRM 395

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
             +   F  MP RN+VSWN+L++  A +G     +  FE M + G +PD VS   VLSAC
Sbjct: 396 LASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSAC 455

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           +  GL EEG  YF+SM++ + +  + EHY+ MV +L RSG  +EA  ++ QMPFEPD  +
Sbjct: 456 TQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCV 515

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W ++++SCR+H  ++  + AA ++F++E  R+   Y+ +SNIYA    W  V  V+  MR
Sbjct: 516 WGALLSSCRVHNRVDLGEIAAKRVFELEP-RNPGNYILLSNIYASKAMWVEVDMVRDMMR 574

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            RG++K   YSW+E+K+KVH+  A D  HPQ  +I  K+  L  EMKK GY P T   L 
Sbjct: 575 SRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQ 634

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D +E+ K + L  HSE+LA+   L+NT  G P+ V+KNLR C DCHA IK IS    REI
Sbjct: 635 DVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREI 694

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD++RFH FK G CSC D+W
Sbjct: 695 FVRDTNRFHQFKGGVCSCGDYW 716



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 211/489 (43%), Gaps = 73/489 (14%)

Query: 35  RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
           +T +S    I  +S+ N F    ++F  M T G   PD     T++  C+         Q
Sbjct: 37  KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQG-IVPDSRVLPTVIKTCAALSALQTGKQ 95

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK----------------- 137
           +H   +  G     ++ +SL+  Y +   L  AR VF ++PQ                  
Sbjct: 96  MHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGR 155

Query: 138 ------------------DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
                             + VS+N +I+GF + G   +A+ +F  M   G KP   + ++
Sbjct: 156 VKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSS 215

Query: 180 ALSAGVGLADIAL-GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            L A VG  D+ L G Q+H +V+K     + FV +AL+D+Y K  C  E   +F EM EV
Sbjct: 216 VLPA-VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEV 274

Query: 239 DGVSYNVMITCYAWN----------EQYK-----------------------ESLKLFRE 265
           D  + N ++T  + N          +Q+K                       E+L+LFRE
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +Q      +      LL    N   L  G+  H  ++     ++V V ++L+DMYAKCGR
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGR 394

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
              ++  F  + + + V W ++++ Y   G   EA+N+F  M R     D  +F  +L A
Sbjct: 395 MLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSA 454

Query: 386 SAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIV 443
             +      G      + R+ G  + +   S ++ +  +SG L++A    K+MP E +  
Sbjct: 455 CTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSC 514

Query: 444 SWNALISAC 452
            W AL+S+C
Sbjct: 515 VWGALLSSC 523



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 42/390 (10%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
           +P    V+++ LIS + + G +   +ELF       V+   VSW  +I G+++   + +A
Sbjct: 135 LPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDA 194

Query: 57  FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
             +F +M  + G  PD  + +++L    + D     IQ+H  +IK G      + ++L+D
Sbjct: 195 VLMFQNMHLE-GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALID 253

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL---------------------- 154
            Y K  C      VF EM + D  + NAL+TG ++ GL                      
Sbjct: 254 MYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWT 313

Query: 155 -----------NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
                      + EA++LF EMQ  G KP+  T    L A   +A +  G+  H F ++ 
Sbjct: 314 SMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRN 373

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
               +V+V +AL+D+Y+K   ++ +R  F  MP  + VS+N ++  YA + +  E++ +F
Sbjct: 374 GIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIF 433

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN--SLVDMYA 321
             +Q          F+ +LS        + G   +  ++      E ++ +   +V +  
Sbjct: 434 ELMQRCGQKPDHVSFTCVLSACTQGGLTEEG-WFYFDSMSRNHGVEARMEHYSCMVTLLG 492

Query: 322 KCGRFEEAKEIFANLS-HISTVPWTAMISA 350
           + GR EEA  +   +     +  W A++S+
Sbjct: 493 RSGRLEEAYAMIKQMPFEPDSCVWGALLSS 522


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/660 (33%), Positives = 361/660 (54%), Gaps = 44/660 (6%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCK--IRCLDLARRVFKEMPQKDSVSFNALITGF 149
           L Q+HA +++ G+     +  +L+  Y        D A +VF  +P  +   +N +I G 
Sbjct: 49  LTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            +     +AI  +  M  +  +P+ FT+     A      +  GRQ+H  VVK     +V
Sbjct: 109 LENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDV 167

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            + +A + +Y+    + +ARK+F    E D V +N MI  Y      + +  LF      
Sbjct: 168 HIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLF------ 220

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               +Q P                             +  +   N +++  AK G   +A
Sbjct: 221 ----AQMP-----------------------------VKNIGSWNVMINGLAKGGNLGDA 247

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +++F  +S    + W++M+  Y+  G  +EAL +F +M R      +   +S+L A + +
Sbjct: 248 RKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            ++  G+ +H+++ R+    +   G+ALLDMYAK G L    + F+EM ER I +WNA+I
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              A +G A+  L+ F  + +   +P+ ++L+ VL+AC+H G +++GL+ F +M + Y +
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P+ EHY  MVD+L RSG F EAE L+  MP +P+  +W +++ +CRIH N + A++   
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGK 487

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            L ++E  +++  YV +SNIYA  G+++ VS+++K M+ RG++ V   S V+L   VH F
Sbjct: 488 ILLELEP-QNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEF 546

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D  HPQ  EI RK++ + + ++  G+ PDTS  L D DEE K  ++ YHSE+LAIAF
Sbjct: 547 KMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAF 606

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            LINT  G  I ++KNLR C DCH+A KLIS+I  REI VRD  R+HHFK+G CSC+DFW
Sbjct: 607 GLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 177/403 (43%), Gaps = 65/403 (16%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           N   A ++F+S+ +     W I+I G  + N+  +A   +  M  D  + P+  T+ TL 
Sbjct: 82  NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID--ARPNKFTYPTLF 139

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSIL-----------------------------IIC 111
             CS      E  Q+H  ++K G  S +                             ++C
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVC 199

Query: 112 -NSLVDSYCKIRCLDL-------------------------------ARRVFKEMPQKDS 139
            N+++D Y K   L+                                AR++F EM ++D 
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           +S+++++ G+   G  +EA+++F +MQ    +P  F  ++ L+A   +  I  GR VHA+
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           + + +   +  +  ALLD+Y+K   +    ++F EM E +  ++N MI   A + + +++
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HTQTIVTTAISEVKVANSLVD 318
           L+LF +LQ  R   +      +L+  A+   +  G +I  T         E++    +VD
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439

Query: 319 MYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           +  + G F EA+++  ++    +   W A++ A    GN + A
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 8/240 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  S N++I+G  K GNL  AR+LF+ M +R  +SW+ ++ GY    +++EA ++F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +  + P     +++L+ CS     ++   VHA + +       ++  +L+D Y K
Sbjct: 283 QQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD+   VF+EM +++  ++NA+I G A  G  E+A++LF ++Q    KP+  T    
Sbjct: 342 CGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGV 401

Query: 181 LS--AGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           L+  A  G  D  L   + +  F      +E+      ++DL  +     EA  L   MP
Sbjct: 402 LTACAHAGFVDKGLRIFQTMREFYGVDPELEHY---GCMVDLLGRSGLFSEAEDLINSMP 458



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 162/343 (47%), Gaps = 18/343 (5%)

Query: 274 SQFPFSTLLSVVANK--LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC--GRFEEA 329
           S+ P  T+L +  +K    LQ   Q+H   + +    +  V+ +L+  YA      F+ A
Sbjct: 27  SKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFA 86

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F+++ + +   W  +I   ++   L +A+  +  M   +   ++ T+ ++ +A +  
Sbjct: 87  LKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVA 145

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            ++  G+Q+H  V++ G  S+V   SA + MYA  G L+DA + F    E ++V WN +I
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMI 204

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
               + G  +A    F  M        +V    +++  +  G + +  + F+ M+++ ++
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFDEMSERDEI 260

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKK 566
                 ++SMVD    +G + EA ++  QM  E   P   + SSV+ +C     ++  + 
Sbjct: 261 S-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
               L +     DA    A+ ++YA  G+ +   +V + M+ER
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER 358


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/747 (31%), Positives = 404/747 (54%), Gaps = 9/747 (1%)

Query: 4    QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
            Q  +  N LIS Y + G+LA AR++F+++      +W  +I GY +     EAF+LF  M
Sbjct: 335  QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAM 393

Query: 64   RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
               G   PD  T+A+LL+ C++    +   ++H+ I   G+ + L +  +L+  Y K   
Sbjct: 394  EQKG-FQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGS 452

Query: 124  LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             + AR+VF +MP+++ +S+NA I+   +  L +EA + F +M+     P   TF   L++
Sbjct: 453  PEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNS 512

Query: 184  GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                 D+  GR +H  + +   + N  VANAL+ +Y +   + +AR++F  +   D  S+
Sbjct: 513  CTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSW 572

Query: 244  NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
            N MI     +     +  LFR+ +       ++ F  +L  VAN  DL  GR IH     
Sbjct: 573  NAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEK 632

Query: 304  TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 +++V  +L+ MY+KCG   +A+ +F+ +     V W AM++AY      ++AL L
Sbjct: 633  GGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKL 692

Query: 364  FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
            F +M    ++ D +T+++ L A A L ++  GK++H+ +  +G  ++    ++L++MY++
Sbjct: 693  FQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSR 752

Query: 424  SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
             G L  A Q F++M  R+I SWNALI+   QNG     L+ +E M+++   P+  +  S+
Sbjct: 753  CGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSI 812

Query: 484  LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
            LS+ +  G  E+   +  S+ +++ + P ++HYA MV  L R+G   EAE+ + ++  E 
Sbjct: 813  LSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAES 872

Query: 544  DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
              +MW S++ +CRIH N+E A+ A + L   +     A    + +IYA AG+WE VS +K
Sbjct: 873  AALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLK 932

Query: 604  KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
              M+E G+  + + + +E+ S+ H F AN  L PQ   ++ KIE L+++M   G+  D  
Sbjct: 933  TTMQEAGLVALKSCT-IEVNSEFHNFIAN-HLSPQIG-VQCKIEELVRKMTDRGFSLDPQ 989

Query: 664  CALHDEDEEIKVESLKYH-SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
             A +D  E+   E L +   E LA+A+ L +T  G  I  + + R     H  +K IS+ 
Sbjct: 990  YASNDSREK---ECLFFQCPELLAVAYGLEHTASGVSIRCVTDSRVTDPSHEMLKFISRA 1046

Query: 723  TGREITVRDSSRFHHFKDGFCSCRDFW 749
              R I VRD + FH F+DG CSC D+W
Sbjct: 1047 YDRGILVRDPNCFHIFEDGICSCGDYW 1073



 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/592 (31%), Positives = 321/592 (54%), Gaps = 5/592 (0%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
            VST  LI+ Y K G+L  AR++FN M +R  VSWT +I GY Q    REA  LF  +  
Sbjct: 237 NVST-ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKL-I 294

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
             G  P+ V+FA++L  C+ P+   E +++HA I + G    +++ N+L+  Y +   L 
Sbjct: 295 RSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLA 354

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR+VF  +   +  ++NA+I G+  EGL EEA +LF  M+  GF+P  FT+A+ L+   
Sbjct: 355 NARQVFDNLRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICA 413

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
             AD+  G+++H+ +  T +  ++ VA AL+ +Y+K     EARK+F +MPE + +S+N 
Sbjct: 414 DRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNA 473

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
            I+C   ++  KE+ + F++++    +     F TLL+   +  DL+ GR IH +     
Sbjct: 474 FISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWG 533

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
            +S   VAN+L+ MY +CG   +A+E+F  +       W AMI+A VQ G    A +LF 
Sbjct: 534 MLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFR 593

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           +        D+ TF ++LRA A L  L  G+ +H  V + GF  ++   + L+ MY+K G
Sbjct: 594 KYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCG 653

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           SL+DA   F  + E+++V WNA+++A A +   Q  LK F+ M   G  PDS +  + L+
Sbjct: 654 SLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALN 713

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           AC+    +E G +  ++  ++  +        S++++  R GC   A+++  +M    D 
Sbjct: 714 ACARLTAVEHG-KKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKM-LSRDI 771

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
             W+++I     +     A +  + + +   + + A + ++ + YA  G+ E
Sbjct: 772 NSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEE 823



 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/641 (29%), Positives = 334/641 (52%), Gaps = 35/641 (5%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            NMLIS Y K G++  A  +F +M D+  VSW  +I GY+   + +EA  LF  M+ +G 
Sbjct: 138 NNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREG- 196

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  TF ++LS C  P       Q+H+ I K GY S + +  +L++ YCK   L+LAR
Sbjct: 197 LKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELAR 256

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           +VF EM +++ VS+ A+I+G+ + G + EA+ LF ++   G +P+  +FA+ L A     
Sbjct: 257 KVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN 316

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D+  G ++HA++ +    + V V NAL+ +YS+   +  AR++F  +  ++  ++N MI 
Sbjct: 317 DLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIA 376

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y      +E+ +LFR ++   F   +F +++LL++ A++ DL  G+++H+Q   T   +
Sbjct: 377 GYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQT 435

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           ++ VA +L+ MYAKCG  EEA+++F  +   + + W A IS   +    +EA   F +M 
Sbjct: 436 DLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMR 495

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           R +++ D  TF ++L +      L  G+ +H  + + G +SN    +AL+ MY + G+L 
Sbjct: 496 RDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLA 555

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA + F  +  R++ SWNA+I+A  Q+G   +    F      G + D  + ++VL A +
Sbjct: 556 DAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVA 615

Query: 489 HC----------GLIEEG-----LQYFNSMTQKY----KLRPKKEHYASMV--DILCRSG 527
           +           GL+E+G     ++   ++ + Y     LR  +  ++++   D++C + 
Sbjct: 616 NLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNA 675

Query: 528 CF---------DEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
                       +A KL  QM  E   PD   +S+ +N+C     +E  KK   QL +  
Sbjct: 676 MLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAG 735

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
              D     ++  +Y+  G   S  QV + M  R +    A
Sbjct: 736 METDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNA 776



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 261/477 (54%), Gaps = 3/477 (0%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           +A  L  C    +  E  +VH  +    +   + + N L+  Y K   ++ A  VF+ M 
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME 162

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            KD VS+NA+I+G+A  G ++EA  LF +MQ  G KP+  TF + LSA      +  G Q
Sbjct: 163 DKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQ 222

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H+ + K  +  +V V+ AL+++Y K   +  ARK+F EM E + VS+  MI+ Y  +  
Sbjct: 223 IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 282

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
            +E+L LFR+L  +    ++  F+++L    N  DL  G ++H          EV V N+
Sbjct: 283 SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNA 342

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+ MY++CG    A+++F NL  ++   W AMI+ Y  +G +EEA  LF  M +     D
Sbjct: 343 LISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQPD 401

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           + T+AS+L   A+ A L  GK+LHS +  +G+ +++   +AL+ MYAK GS ++A + F 
Sbjct: 402 KFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFN 461

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           +MPERN++SWNA IS C ++   +   ++F+ M +    PD ++ +++L++C+    +E 
Sbjct: 462 QMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLER 521

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G +Y +    ++ +        +++ +  R G   +A ++  ++    D   W+++I
Sbjct: 522 G-RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIR-RRDLGSWNAMI 576



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 216/406 (53%), Gaps = 7/406 (1%)

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A  L   V    +A G++VH  +    F  ++++ N L+ +YSK   + +A  +F  M 
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME 162

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + D VS+N MI+ YA + + +E+  LF ++Q      +Q  F ++LS   + + L+ G Q
Sbjct: 163 DKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQ 222

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           IH++       S+V V+ +L++MY KCG  E A+++F  +   + V WTAMIS YVQ G+
Sbjct: 223 IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 282

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA 416
             EAL LF ++ R+ I  ++ +FASIL A      L  G +LH+++ ++G    V  G+A
Sbjct: 283 SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNA 342

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
           L+ MY++ GSL +A Q F  +   N  +WNA+I+   + G  +   + F  M Q G+QPD
Sbjct: 343 LISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPD 401

Query: 477 SVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLM 536
             +  S+L+ C+    ++ G +  +S       +       +++ +  + G  +EA K+ 
Sbjct: 402 KFTYASLLAICADRADLDRGKE-LHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460

Query: 537 AQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            QMP E + I W++ I+ C  H       K A Q FK  +  D  P
Sbjct: 461 NQMP-ERNVISWNAFISCCCRHD----LGKEAFQAFKQMRRDDVNP 501



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 2/186 (1%)

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           +  + A+   +A  L+      SL+ GK++H  +  + F  +++  + L+ MY+K GS++
Sbjct: 93  KRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIE 152

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F+ M ++++VSWNA+IS  A +G  Q     F  M + G +P+  + +S+LSAC 
Sbjct: 153 DANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQ 212

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
               +E G Q  +S   K           +++++ C+ G  + A K+  +M  E + + W
Sbjct: 213 SPIALEFGEQ-IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSW 270

Query: 549 SSVINS 554
           +++I+ 
Sbjct: 271 TAMISG 276


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/561 (38%), Positives = 330/561 (58%), Gaps = 7/561 (1%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVV---EARKLFGEMPEVDGVSYNVMITCY 250
           +Q+ AF +KT+   ++ V    ++  S +        A  LF ++P+ D V +N M   Y
Sbjct: 37  KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A  +    +  LF ++ F+      + F +LL   A+   L+ GRQ+H   I       V
Sbjct: 97  ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L++MY  C   + A+ +F  +     V + AMI+ Y +     EAL+LF E+   
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQAR 216

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           N+     T  S+L + A L +L LGK +H +V ++GF   V   +AL+DMYAK GSL DA
Sbjct: 217 NLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDA 276

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           +  F+ M  R+  +W+A+I A A +G     +  F++M ++G +PD ++ L +L ACSH 
Sbjct: 277 VCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHT 336

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+EEG +YF  M  KY + P  +HY  MVD+L R+G  +EA + +  +P  P  I+W +
Sbjct: 337 GLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRT 396

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++++C  H N+E  K+  +Q+F+++       Y+ +SN+ A AG+WE V+ V+K M ERG
Sbjct: 397 LLSACGSHGNVELGKRVIEQIFELDD-SHGGDYIILSNLCARAGRWEDVNYVRKLMNERG 455

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD-- 668
           V K+   S VE+ + VH F + D +H  + ++ + ++ L++E+K  GY P+TS   H   
Sbjct: 456 VVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADM 515

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
           EDEE +V +L+YHSE+LAI F L+NTP G+ I V+KNLR C DCH+A KLIS I  R+I 
Sbjct: 516 EDEEKEV-TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQII 574

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           +RD  RFHHFKDG CSC D+W
Sbjct: 575 LRDVQRFHHFKDGKCSCEDYW 595



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 5/337 (1%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  LF+ +     V +  +  GY++ +    AF LF  +   G    DY TF +LL  C+
Sbjct: 74  AHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDY-TFPSLLKACA 132

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                 E  Q+H   IK G +  + +C +L++ Y     +D ARRVF ++ +   V++NA
Sbjct: 133 SCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA 192

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +ITG+A+     EA+ LF E+Q    KP+D T  + LS+   L  + LG+ +H +V K  
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F   V V  AL+D+Y+K   + +A  +F  M   D  +++ MI  YA +    +++ LF+
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAISEVKVANSLVDMYAKC 323
           E++    +  +  F  LL   ++   ++ G +  +        I  +K    +VD+  + 
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRA 372

Query: 324 GRFEEAKEIFANLSHISTVP--WTAMISAYVQKGNLE 358
           GR EEA E    L  I   P  W  ++SA    GN+E
Sbjct: 373 GRLEEAYEFIVGLP-IRPTPILWRTLLSACGSHGNVE 408



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 34/185 (18%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y K G+L  A  +F +M  R   +W+ +I  Y+      +A  LF +MR   G++P
Sbjct: 263 LIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMR-KAGTEP 321

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D +TF  LL  CS           H  +++ G+         + D Y  I  +       
Sbjct: 322 DEITFLGLLYACS-----------HTGLVEEGFEYFY----GMRDKYGVIPGIK------ 360

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
                     +  ++    + G  EEA +  V    L  +P+   +   LSA     ++ 
Sbjct: 361 ---------HYGCMVDLLGRAGRLEEAYEFIVG---LPIRPTPILWRTLLSACGSHGNVE 408

Query: 192 LGRQV 196
           LG++V
Sbjct: 409 LGKRV 413


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/555 (39%), Positives = 325/555 (58%), Gaps = 25/555 (4%)

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           N    N L+  Y ++  + EARK+F +MPE + VS+  MI  Y      +E L    EL 
Sbjct: 24  NTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYV-----QEGLIEEAELL 78

Query: 268 FTRF-DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
           F R  +R+   ++ +L  +     +   RQ+         + +V  + +++D     GR 
Sbjct: 79  FWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM----PVKDVVASTNMIDGLCSEGRL 134

Query: 327 EEAKEIFANLSHISTVPWTAMISA-------------YVQKGNLEEALNLFIEMCRANIS 373
            EA+EIF  +   + V WT+MIS              Y +KG   EAL LF  M R  + 
Sbjct: 135 IEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVR 194

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
               +  S+L     LASL  G+Q+HS ++RS F  +++  S L+ MY K G L  A + 
Sbjct: 195 PSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRV 254

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLI 493
           F     ++IV WN++I+  AQ+G  +  L+ F DM  S   PD ++ + VLSACS+ G +
Sbjct: 255 FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKV 314

Query: 494 EEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVIN 553
           +EGL+ F SM  KY++ PK EHYA MVD+L R+G  +EA  L+  MP E D I+W +++ 
Sbjct: 315 KEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLG 374

Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
           +CR HKNL+ A+ AA +L ++E   +A PY+ +SN+Y+   +W+ V +++K MR + +RK
Sbjct: 375 ACRTHKNLDLAEIAAKKLLQLEP-NNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRK 433

Query: 614 VTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
               SW+E+  KVH+F+      HP+   I +K+  L   +++ GY PD S  +HD DEE
Sbjct: 434 SPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEE 493

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            KV SL+ HSE+LA+A+ L+  PEG PI VMKNLR C D H+ IKLI+++TGREI +RD+
Sbjct: 494 EKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDT 553

Query: 733 SRFHHFKDGFCSCRD 747
           +RFHHFKDG CSC D
Sbjct: 554 NRFHHFKDGLCSCSD 568



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 194/376 (51%), Gaps = 26/376 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP  NT+S N L+SGYV++G ++ AR++F+ M +R  VSWT +I GY Q+    EA  LF
Sbjct: 20  MPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLF 79

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++  +L G  E    +E  Q+  D++       ++   +++D  C 
Sbjct: 80  WRM-----PERNVVSWTVMLGGLIEDGRVDEARQLF-DMMPV---KDVVASTNMIDGLCS 130

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITG-------------FAKEGLNEEAIKLFVEMQH 167
              L  AR +F EMPQ++ V++ ++I+G             + ++G   EA+ LF  MQ 
Sbjct: 131 EGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQR 190

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G +PS  +  + LS    LA +  GRQVH+ +V++ F  +++V++ L+ +Y K   +V 
Sbjct: 191 EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVT 250

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A+++F      D V +N +I  YA +   +++L++F ++  +     +  F  +LS  + 
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLS-HISTVPW 344
              ++ G +I  +++ +    + K  +   +VD+  + G+  EA  +  N+      + W
Sbjct: 311 TGKVKEGLEIF-ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 369

Query: 345 TAMISAYVQKGNLEEA 360
            A++ A     NL+ A
Sbjct: 370 GALLGACRTHKNLDLA 385



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 42/366 (11%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG-V 185
           AR++F +MP+ +++S+N L++G+ + G+  EA K+F +M               +  G +
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72

Query: 186 GLADIALGRQVHAFVVK-----TNFVENVFV--ANALLDLYSKHDCV------------- 225
             A++   R     VV         +E+  V  A  L D+    D V             
Sbjct: 73  EEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEG 132

Query: 226 --VEARKLFGEMPEVDGVSYNVMITCY----AWNEQYK---------ESLKLFRELQFTR 270
             +EAR++F EMP+ + V++  MI+       W+   K         E+L LF  +Q   
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG 192

Query: 271 FDRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
             R  FP   ++LSV  +   L  GRQ+H+Q + +    ++ V++ L+ MY KCG    A
Sbjct: 193 V-RPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTA 251

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           K +F   S    V W ++I+ Y Q G  E+AL +F +M  ++I+ D+ TF  +L A +  
Sbjct: 252 KRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYT 311

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWN 446
             +  G ++    ++S +  +  +   + ++D+  ++G L +A+   + MP E + + W 
Sbjct: 312 GKVKEGLEIFE-SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 370

Query: 447 ALISAC 452
           AL+ AC
Sbjct: 371 ALLGAC 376



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 143/329 (43%), Gaps = 44/329 (13%)

Query: 320 YAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATF 379
           Y +  R  EA+++F  +   +T+ W  ++S YVQ G + EA  +F +M   N+ +  A  
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63

Query: 380 ASILRAS----AELASLSLG-KQLHSFVIRSGFM------------------SNVFSGSA 416
              ++      AEL    +  + + S+ +  G +                   +V + + 
Sbjct: 64  RGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTN 123

Query: 417 LLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED--------- 467
           ++D     G L +A + F EMP+RN+V+W ++IS    +G     +K +E          
Sbjct: 124 MIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALA 183

Query: 468 ----MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ-KYKLRPKKEHYASMVDI 522
               M + G +P   S++SVLS C     ++ G Q  + + + ++ +    + Y S V I
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI----DIYVSSVLI 239

Query: 523 LCRSGCFD--EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
                C D   A+++  +     D +MW+S+I     H   E A +    +F      D 
Sbjct: 240 TMYIKCGDLVTAKRVFDRFS-SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDE 298

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRER 609
             ++ + +  +  G+ +   ++ ++M+ +
Sbjct: 299 ITFIGVLSACSYTGKVKEGLEIFESMKSK 327


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/672 (33%), Positives = 380/672 (56%), Gaps = 10/672 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+ + L+  Y K   L  A  +F  M +R  V W+ +I GY Q ++F E  KLF DM 
Sbjct: 172 DVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM- 230

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIR 122
              G      T+A++   C+         Q+H   +K  F Y+SI  I  + +D Y K  
Sbjct: 231 LKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSI--IGTATLDMYAKCE 288

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ--HLGFKPSDFTFAAA 180
            +  A +VF  +P     S+NA+I G+A++    +A+ +F  +Q  +LGF   + + + A
Sbjct: 289 RMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGF--DEISLSGA 346

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L+A   +     G Q+H   VK     N+ VAN +LD+Y K   ++EA  +F EM   D 
Sbjct: 347 LTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDA 406

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           VS+N +I  +  NE+  ++L LF  +  +  +   F + +++   A +  L  G +IH +
Sbjct: 407 VSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGR 466

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +    +  V ++LVDMY KCG   EA++I A L   +TV W ++IS +  +   E A
Sbjct: 467 IIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
              F +M    I  D  T+A++L   A +A++ LGKQ+H+ +++    S+V+  S L+DM
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM 586

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y+K G+++D+   F++ P+R+ V+W+A+I A A +G  +  +  FE+M     +P+    
Sbjct: 587 YSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIF 646

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           +SVL AC+H G +++GL YF  M   Y L P+ EHY+ MVD+L RSG  +EA KL+  MP
Sbjct: 647 ISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMP 706

Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
           FE D+++W +++++C++  N+E A+KA + L +++  +D++ YV ++N+YA+ G W  V+
Sbjct: 707 FEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDP-QDSSAYVLLANVYAIVGMWGEVA 765

Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +++  M+   ++K    SW+E++ +VH F   D+ HP++ EI  +   L+ EMK  GY P
Sbjct: 766 KMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVP 825

Query: 661 DTSCALHDEDEE 672
           D    L +E EE
Sbjct: 826 DIDFMLDEEMEE 837



 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/585 (31%), Positives = 314/585 (53%), Gaps = 13/585 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +S N LI GY   GN+  A+ LF+SM +R  VSW  L+  Y      R++ ++F
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V MR+      DY TFA +L  CS  +     +QVH   I+ G+ + ++  ++LVD Y K
Sbjct: 127 VRMRSLK-IPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD A RVF+EMP+++ V ++A+I G+ +     E +KLF +M  +G   S  T+A+ 
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +  GL+   LG Q+H   +K++F  +  +  A LD+Y+K + + +A K+F  +P    
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS---TLLSVVANKLDLQIGRQI 297
            SYN +I  YA  +Q  ++L +F+ LQ       +   S   T  SV+   L+   G Q+
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE---GIQL 362

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +       + VAN+++DMY KCG   EA  IF  +     V W A+I+A+ Q   +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            + L+LF+ M R+ +  D  T+ S+++A A   +L+ G ++H  +I+SG   + F GSAL
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSAL 482

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMY K G L +A +    + E+  VSWN++IS  +    ++   + F  M++ G  PD+
Sbjct: 483 VDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
            +  +VL  C++   IE G Q  ++   K +L       +++VD+  + G   ++  +  
Sbjct: 543 YTYATVLDVCANMATIELGKQ-IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFE 601

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           + P + D + WS++I +   H      +KA + LF+  +L +  P
Sbjct: 602 KAP-KRDYVTWSAMICAYAYHG---LGEKAIN-LFEEMQLLNVKP 641



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 277/556 (49%), Gaps = 47/556 (8%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           +TF+ +L  CS     N   QVH  +I  G+   + + N L+  YCK   ++ A +VF  
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 134 MPQKDSVSFNALITGFA-------------------------------KEGLNEEAIKLF 162
           MPQ+D +S+N LI G+A                                 G+N ++I++F
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 163 VEMQHLGFKPSDF-TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
           V M+ L   P D+ TFA  L A  G+ D  LG QVH   ++  F  +V   +AL+D+YSK
Sbjct: 127 VRMRSLKI-PHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
              + +A ++F EMPE + V ++ +I  Y  N+++ E LKLF+++       SQ  ++++
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
               A     ++G Q+H   + +    +  +  + +DMYAKC R  +A ++F  L +   
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
             + A+I  Y ++    +AL++F  + R N+  D+ + +  L A + +     G QLH  
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGL 365

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            ++ G   N+   + +LDMY K G+L +A   F+EM  R+ VSWNA+I+A  QN +   T
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH------ 515
           L  F  M++S  +PD  +  SV+ AC+       G Q  N  T+ +    K         
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACA-------GQQALNYGTEIHGRIIKSGMGLDWFV 478

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
            +++VD+  + G   EAEK+ A++  E   + W+S+I+     K  E A++   Q+ +M 
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537

Query: 576 KLRDAAPYVAMSNIYA 591
            + D   Y  + ++ A
Sbjct: 538 IIPDNYTYATVLDVCA 553


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/625 (34%), Positives = 354/625 (56%), Gaps = 3/625 (0%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAGV 185
           A  VF      D +++N+++  F    +   A++ + EM       P  FTF + L    
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L +  +G+ +H  VVK     ++++   LL++Y+    +  AR LF  M   + V +  
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           MI+ Y  N    E+L L+++++   F   +   +TL+S  A   DL +G ++H+      
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
                 + ++LV+MYAKCG  + A+++F  LS      W+A+I  YV+     EAL LF 
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 366 EMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
           E+   +N+  ++ T  +++ A A+L  L  G+ +H ++ R+    +V   ++L+DM++K 
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G +  A + F  M  ++++SWN++++  A +G  +  L  F  M  +  QPD ++ + VL
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACSH GL++EG + F  +   Y +R K EHY  MVD+LCR+G   EA + +  MP +PD
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +W S++ +CR++ NLE  ++AA  L ++E   D   Y+ +SNIYA    W  V +V++
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGV-YILLSNIYARRKMWNEVKKVRE 509

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M E+G++K    S V + +  H F A D  HP+  EI   +  + +++K  GY  DTS 
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSE 569

Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
            L + D+  K ES+  HSE+LA+ + L+ +  G  I+++KNLR C+DCH  IKL+SKI  
Sbjct: 570 VLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQ 629

Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
           R+IT+RD +RFHHFKDG CSCRD+W
Sbjct: 630 RQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 227/451 (50%), Gaps = 7/451 (1%)

Query: 8   STNMLISGYVKSGNLAT--ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           S N LI+  +  G+L    A  +F        ++W  ++  +   N  R A + + +M  
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
              + PD  TF +LL GC+          +H  ++K+  +S L I  +L++ Y     L 
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            AR +F+ M  ++ V + ++I+G+ K     EA+ L+ +M+  GF P + T A  +SA  
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L D+ +G ++H+ + + +      + +AL+++Y+K   +  AR++F ++ + D  +++ 
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSA 251

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
           +I  Y  N +  E+L+LFRE+      R ++     ++S  A   DL+ GR +H     T
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                V + NSL+DM++KCG  + AK IF ++S+   + W +M++     G   EAL  F
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQF 371

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYA 422
             M   ++  D+ TF  +L A +    +  GK+L  + I + +   + S     ++D+  
Sbjct: 372 HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLC 430

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++G L +A +  + MP + +   W +++ AC
Sbjct: 431 RAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/695 (33%), Positives = 368/695 (52%), Gaps = 37/695 (5%)

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYC--KIRCLDLARRVFKEMPQKDSVSFNALITG 148
           +L Q+HA +++          + L+ +Y      CL  A+ VF ++PQ +   +N LI G
Sbjct: 87  QLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRG 146

Query: 149 FAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           +A      ++  +F+ M H   + P+ FTF     A   L  + LG  +H  V+K +   
Sbjct: 147 YASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSS 206

Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
           ++F+ N+L++ Y        A ++F  MP  D VS+N MI  +A      ++L LF+E++
Sbjct: 207 DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 266

Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
                 +     ++LS  A K+DL+ GR I +          + + N+++DMY KCG   
Sbjct: 267 MKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCIN 326

Query: 328 EAKEIFANLS-------------------------------HISTVPWTAMISAYVQKGN 356
           +AK++F  +S                               H  T  W A+ISAY Q G 
Sbjct: 327 DAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGK 386

Query: 357 LEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
              AL+LF EM    +   D+ T    L ASA+L ++  G  +H ++ +     N    +
Sbjct: 387 PRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLAT 446

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
           +LLDMYAK G+L  A++ F  +  +++  W+A+I A A  G  +A L  F  M+++  +P
Sbjct: 447 SLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKP 506

Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
           ++V+  ++L AC+H GL+ EG Q F  M   Y + P+ +HY  +VDI  R+G  ++A   
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASF 566

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           + +MP  P   +W +++ +C  H N+E A+ A   L ++E     A +V +SNIYA AG 
Sbjct: 567 IEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGA-FVLLSNIYAKAGD 625

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
           WE VS ++K MR+  V+K    S +++   VH F   D  HP + +I  K++ + ++ K 
Sbjct: 626 WEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKP 685

Query: 656 EGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHA 714
            GYKPD S  L   E++ +  +SL  HSE+LAIAF LI+T    PI ++KN+R C DCHA
Sbjct: 686 IGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHA 745

Query: 715 AIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
             KL+S++  R+I +RD  RFHHF+ G CSC D+W
Sbjct: 746 FAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 225/483 (46%), Gaps = 34/483 (7%)

Query: 22  LATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           L  A+ +FN +       W  LI GY+  +   ++F +F+ M       P+  TF  L  
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 181

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
             S     +    +H  +IK   +S L I NSL++ Y      DLA RVF  MP KD VS
Sbjct: 182 AASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVS 241

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +NA+I  FA  GL ++A+ LF EM+    KP+  T  + LSA     D+  GR + +++ 
Sbjct: 242 WNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIE 301

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS------------------- 242
              F E++ + NA+LD+Y K  C+ +A+ LF +M E D VS                   
Sbjct: 302 NNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHC 361

Query: 243 ------------YNVMITCYAWNEQYKESLKLFRELQFTRFDRS-QFPFSTLLSVVANKL 289
                       +N +I+ Y  N + + +L LF E+Q ++  +  +      L   A   
Sbjct: 362 IFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLG 421

Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
            +  G  IH             +A SL+DMYAKCG   +A E+F  +       W+AMI 
Sbjct: 422 AIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIG 481

Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFM 408
           A    G  + AL+LF  M  A I  +  TF +IL A      ++ G+QL        G +
Sbjct: 482 ALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIV 541

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
             +     ++D++ ++G L+ A    ++MP       W AL+ AC+++G+ +    ++++
Sbjct: 542 PQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQN 601

Query: 468 MVQ 470
           +++
Sbjct: 602 LLE 604



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 83/183 (45%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   ++ G+ K GN   A  +F++M  +   +W  LI  Y Q  + R A  LF
Sbjct: 335 MSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLF 394

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+    + PD VT    L   ++    +    +H  I K   N    +  SL+D Y K
Sbjct: 395 HEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAK 454

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L+ A  VF  + +KD   ++A+I   A  G  + A+ LF  M     KP+  TF   
Sbjct: 455 CGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNI 514

Query: 181 LSA 183
           L A
Sbjct: 515 LCA 517



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N      L+  Y K GNL  A E+F+++  +    W+ +IG  +   Q + A  LF  
Sbjct: 439 NLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSS 498

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M  +    P+ VTF  +L  C+     NE  Q+   +   +G    +     +VD + + 
Sbjct: 499 M-LEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRA 557

Query: 122 RCLDLARRVFKEMPQKDSVS-FNALITGFAKEG---LNEEAIKLFVEMQ 166
             L+ A    ++MP   + + + AL+   ++ G   L E A +  +E++
Sbjct: 558 GLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELE 606


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/590 (36%), Positives = 343/590 (58%), Gaps = 37/590 (6%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H+ ++K  F ++  ++N LLD+Y K   + +A +LF EMP  D VS+  ++T +    
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 255 QYKESLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
             + +L +   + FT        F F+ ++   ++   L++G+Q+H + +++    +  V
Sbjct: 84  IPRRTLSMLNTM-FTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVV 142

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI------- 365
            +SL+DMY KCG+ +EA+ +F ++   ++V WT+MIS Y + G   EA++LF+       
Sbjct: 143 KSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNL 202

Query: 366 ------------------------EMCRANIS-ADQATFASILRASAELASLSLGKQLHS 400
                                   EM R  I   D    +S++   A LA L LGKQ+H 
Sbjct: 203 FSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG 262

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            VI  GF S +F  +AL+DMYAK   +  A   F  MP ++++SW ++I   AQ+G A+ 
Sbjct: 263 LVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEE 322

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  +++MV S  +P+ V+ + +L ACSH GL+  G + F SMT  Y + P  +HY  ++
Sbjct: 323 ALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLL 382

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG  DEAE L+ ++PF+PDE  W+S++++C  H NLE   + AD++  + K  D 
Sbjct: 383 DLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDL-KPEDP 441

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQT 639
           + Y+ +SN+YA A  W SVS+V+K M    VRK   YS ++      VF A +   HP  
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
           NEI   +++L  EM+K GY P+TS  L+D +++ K + L +HSERLA+A+ L+    G+ 
Sbjct: 502 NEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTI 561

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I ++KNLR C DCH  +K IS I  REI VRD++R+HHFK+G CSC DFW
Sbjct: 562 IRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 211/423 (49%), Gaps = 35/423 (8%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F   L  C+   +A+   ++H+ IIK G++   ++ N+L+D Y K   +  A ++F EMP
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGR 194
            +D VS+ +++T   K  +    + +   M  H G +P  F FA  + A   L  + LG+
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           QVHA  + + F ++  V ++L+D+Y+K     EAR +F  +   + VS+  MI+ YA + 
Sbjct: 126 QVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 255 QYKESLKLF-----REL------------------QFTRFDRSQ---------FPFSTLL 282
           +  E++ LF     R L                   F+ F+  +            S+++
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              AN   L++G+QIH   I     S + ++N+LVDMYAKC     AK+IF  +     +
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSF 401
            WT++I    Q G  EEAL L+ EM  + I  ++ TF  +L A +    +S G++L  S 
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQA 460
                   ++   + LLD+ ++SG L +A     ++P + +  +W +L+SAC ++ + + 
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425

Query: 461 TLK 463
            ++
Sbjct: 426 GVR 428



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 34/395 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++++ +N L+  Y K G +  A +LF+ M +R  VSW  ++  +++    R    +   
Sbjct: 35  DKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M T  G  PD+  FA ++  CS         QVHA  +   +    ++ +SL+D Y K  
Sbjct: 95  MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCG 154

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV------------------- 163
             D AR VF  +  K+SVS+ ++I+G+A+ G   EA+ LF+                   
Sbjct: 155 QPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQ 214

Query: 164 ------------EMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                       EM+  G    D    ++ +     LA + LG+Q+H  V+   F   +F
Sbjct: 215 SGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           ++NAL+D+Y+K   ++ A+ +F  MP  D +S+  +I   A + + +E+L L+ E+  +R
Sbjct: 275 ISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSR 334

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEA 329
              ++  F  LL   ++   +  GR++        +I+  ++    L+D+ ++ G  +EA
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 330 KEIFANLSHISTVP-WTAMISAYVQKGNLEEALNL 363
           + +   +      P W +++SA ++  NLE  + +
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/658 (33%), Positives = 372/658 (56%), Gaps = 4/658 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + +  N ++S Y K G+L  AR +F+SM  +  VSWT +I GYS+  +   A  L+V M 
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQM- 190

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  PD+ TF +++  CS  D      Q+HA ++K  + + LI  N+L+  Y K   +
Sbjct: 191 LRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQM 250

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSA 183
             A  VF  +  KD +S+ ++I GF++ G   EA+  F EM     ++P++F F +A SA
Sbjct: 251 ADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA 310

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L +   GRQ+H   +K     ++F   +L D+Y+K   +  AR +F  + + D V++
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  +A     KES   F +++ T    +     +LL   +  + L  G Q+H+  + 
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK 430

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEALN 362
                ++ V NSL+ MY+KC    +A ++F ++ +    V W  +++A +Q+    E L 
Sbjct: 431 MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLR 490

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           L   M  + I  D  T  ++L +S ++AS  +G Q+H F+++SG   ++   +AL++MY 
Sbjct: 491 LTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYT 550

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GSL+ A + F  +   +I+SW++LI   AQ G  +   + F  M   G +P+ ++ + 
Sbjct: 551 KCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVG 610

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           +L+ACSH G++EEGL+ + +M + Y++ P KEH + MVD+L R+GC D AE  + QMPF 
Sbjct: 611 ILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFV 670

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           PD ++W +++ +C++H NLE  K+AA+ + K++   ++A  V + NI+A +G W+  +++
Sbjct: 671 PDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP-SNSAAVVMLCNIHASSGHWKDFARL 729

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           + +MR   V KV   SW+E+K KVHVF A D LHP+  +I   +E LM ++  +   P
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDSCDP 787



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 263/506 (51%), Gaps = 4/506 (0%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           +KN  REA K F   +    S    VT+  L++ CS   +     ++H  ++   Y   +
Sbjct: 74  KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDM 133

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
           I+ N ++  Y K   L  AR +F  MP K+ VS+ ++I+G+++ G  + AI L+V+M   
Sbjct: 134 ILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G  P  FTF + + +  GL D  L RQ+HA V+K+ F  ++   NAL+ +Y+K   + +A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVAN 287
             +F  +   D +S+  MI  ++      E+L  FRE L  + +  ++F F +  S  + 
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            L+   GRQIH   I     S++    SL DMYAKCG  E A+ +F ++     V W A+
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAI 373

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+ +    N +E+ + F +M    +  +  T  S+L A +E   L+ G Q+HS++++ GF
Sbjct: 374 IAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF 433

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFE 466
             ++   ++LL MY+K  +L DA+Q F+++  + +IVSWN L++AC Q   A   L+  +
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTK 493

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M  S  +PD V+L +VL +       E G Q  +    K  L        +++++  + 
Sbjct: 494 LMFASRIKPDHVTLTNVLVSSGQIASYEVGSQ-IHCFIMKSGLNLDISVSNALINMYTKC 552

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVI 552
           G  + A K+   +   PD I WSS+I
Sbjct: 553 GSLECARKMFDSIG-NPDIISWSSLI 577


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/613 (36%), Positives = 354/613 (57%), Gaps = 11/613 (1%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N LI    K+G  ++A+ L     +    P+  T    + +      ++    VH  +V 
Sbjct: 42  NHLIQSLCKQGNLKQALYLLSHESN----PTQQTCELLILSAARRNSLSDALDVHQLLVD 97

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
             F ++ F+A  L++++S+ D V  ARK+F +  +     +N +    A   +  + L+L
Sbjct: 98  GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157

Query: 263 FRELQFTRFDRSQFPFSTLL-SVVANKLD---LQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +  +        +F ++ LL + VA++     LQ G++IH   +     + V V  +L+D
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC--RANISADQ 376
           MYA+ G    A  +F  +   + V W+AMI+ Y + G   EAL LF EM     +   + 
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T  S+L+A A  A+L  GK +H++++R G  S +   SAL+ MYA+ G L+     F  
Sbjct: 278 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDR 337

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M ++++V WN+LIS+   +G  +  +K FE+M+  G+ P  +S +SVL ACSH GL+EEG
Sbjct: 338 MHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEG 397

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
            + F SM +++ ++P  EHYA MVD+L R+   DEA K++  +  EP   +W S++ +CR
Sbjct: 398 KKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACR 457

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IH ++E A++A+ +LFK+E   +A  YV +++IYA A  W+ V +VKK +  R ++KV  
Sbjct: 458 IHCHVELAERASKRLFKLEP-TNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPG 516

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            SW+E++ K++ FT+ DE +PQ  ++   + NL  EMK+ GY P T   L+D D+E K  
Sbjct: 517 RSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKER 576

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            +  HSE+LA+AF LINT +G  I + KNLR C DCH+  K ISK   REI VRD +RFH
Sbjct: 577 IVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFH 636

Query: 737 HFKDGFCSCRDFW 749
           HFKDG CSC D+W
Sbjct: 637 HFKDGVCSCGDYW 649



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 195/392 (49%), Gaps = 8/392 (2%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           S+P   T   L+   +  ++ ++ + VH  ++  G++    +   L++ + ++  +D AR
Sbjct: 65  SNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNAR 124

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG-- 186
           +VF +  ++    +NAL    A  G   + ++L+  M  +G     FT+   L A V   
Sbjct: 125 KVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASE 184

Query: 187 --LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             ++ +  G+++HA +++  +  +V V   L+D+Y++  CV  A  +F EMP  + VS++
Sbjct: 185 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 244

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
            MI CYA N +  E+L+LFRE+     D   +     ++L   A    L+ G+ IH   +
Sbjct: 245 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 304

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                S + V ++L+ MYA+CG+ E  + IF  +     V W ++IS+Y   G   +A+ 
Sbjct: 305 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 364

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMY 421
           +F EM     S    +F S+L A +    +  GK+L  S V   G   +V   + ++D+ 
Sbjct: 365 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 424

Query: 422 AKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
            ++  L +A +  +++  E     W +L+ AC
Sbjct: 425 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGAC 456



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 13/358 (3%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI+ + +   +  AR++F+    RT   W  L    +   +  +  +L+  
Sbjct: 101 DQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPR 160

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSY 118
           M   G S  D  T+  LL  C   +     +Q    +HA I++ GY + + +  +L+D Y
Sbjct: 161 MNMMGVSS-DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMY 219

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ---HLGFKPSDF 175
            +  C+  A  VF EMP K+ VS++A+I  +AK G   EA++LF EM    H    P+  
Sbjct: 220 ARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV-PNSV 278

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T  + L A    A +  G+ +HA++++      + V +AL+ +Y++   +   + +F  M
Sbjct: 279 TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 338

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
            + D V +N +I+ Y  +   ++++K+F E+    F  S   F ++L   ++   ++ G+
Sbjct: 339 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK 398

Query: 296 QIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP--WTAMISA 350
           ++    +    I   V+    +VD+  +  R +EA +I  +L  I   P  W +++ A
Sbjct: 399 KLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL-RIEPGPKVWGSLLGA 455


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/628 (36%), Positives = 371/628 (59%), Gaps = 50/628 (7%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNE-EAIKLFVEMQHLGFKPSDFTFAAALS 182
           +D A RVF  M  K+++++N+L+ G +K+     EA +LF E+     +P  F++     
Sbjct: 77  IDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSY----- 127

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
                                         N +L  Y ++    +A+  F  MP  D  S
Sbjct: 128 ------------------------------NIMLSCYVRNVNFEKAQSFFDRMPFKDAAS 157

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MIT YA   + +++    REL ++  ++++  ++ ++S      DL+      +   
Sbjct: 158 WNTMITGYARRGEMEKA----RELFYSMMEKNEVSWNAMISGYIECGDLEKA----SHFF 209

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL 361
               +  V    +++  Y K  + E A+ +F +++ + + V W AMIS YV+    E+ L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF  M    I  + +  +S L   +EL++L LG+Q+H  V +S   ++V + ++L+ MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
            K G L DA + F+ M ++++V+WNA+IS  AQ+G+A   L  F +M+ +  +PD ++ +
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
           +VL AC+H GL+  G+ YF SM + YK+ P+ +HY  MVD+L R+G  +EA KL+  MPF
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449

Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
            P   ++ +++ +CR+HKN+E A+ AA++L ++   ++AA YV ++NIYA   +WE V++
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS-QNAAGYVQLANIYASKNRWEDVAR 508

Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           V+K M+E  V KV  YSW+E+++KVH F ++D +HP+ + I +K++ L ++MK  GYKP+
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPE 568

Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
              ALH+ +EE K + L +HSE+LA+AF  I  P+GS I V KNLR C DCH AIK IS+
Sbjct: 569 LEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISE 628

Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I  REI VRD++RFHHFKDG CSC D+W
Sbjct: 629 IEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 219/451 (48%), Gaps = 58/451 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P  +T S N+++S YV++ N   A+  F+ M  + A SW  +I GY+++ +  +A +LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178

Query: 61  VDMRTDGGSDPDYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
             M      + + V++  ++SG   C + + A+   +V A +        ++   +++  
Sbjct: 179 YSM-----MEKNEVSWNAMISGYIECGDLEKASHFFKV-APV------RGVVAWTAMITG 226

Query: 118 YCKIRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
           Y K + ++LA  +FK+M   K+ V++NA+I+G+ +    E+ +KLF  M   G +P+   
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
            ++AL     L+ + LGRQ+H  V K+    +V    +L+ +Y K   + +A KLF  M 
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           + D V++N MI+ YA +    ++L LFRE+   +       F  +L    +   + IG  
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG-M 405

Query: 297 IHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
            + +++V     E +  +   +VD+  + G+ EEA      L  I ++P+    + +   
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA------LKLIRSMPFRPHAAVF--- 456

Query: 355 GNLEEALNLFIEMCRANISADQATFAS--ILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           G L  A       CR + + + A FA+  +L+ +++ A              +G++    
Sbjct: 457 GTLLGA-------CRVHKNVELAEFAAEKLLQLNSQNA--------------AGYVQ--- 492

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
               L ++YA     +D  +  K M E N+V
Sbjct: 493 ----LANIYASKNRWEDVARVRKRMKESNVV 519



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 19/211 (9%)

Query: 402 VIRSGFMS------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           ++RS +++       +F  + ++    +SG +  A++ F  M  +N ++WN+L+   +++
Sbjct: 46  LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
                      D +    +PD+ S   +LS        E+   +F+ M  K         
Sbjct: 106 PSRMMEAHQLFDEIP---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-----DAAS 157

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
           + +M+    R G  ++A +L   M  E +E+ W+++I+      +LE     A   FK+ 
Sbjct: 158 WNTMITGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLE----KASHFFKVA 212

Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            +R    + AM   Y  A + E    + K M
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/559 (39%), Positives = 328/559 (58%), Gaps = 4/559 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+H  V+K  F     V + L++ YSK +    + KLF   P     +++ +I+ +A 
Sbjct: 26  GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQ 85

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N+    +L+ FR +             T    VA    L +   +H  ++ T    +V V
Sbjct: 86  NDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFV 145

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN- 371
            +SLVD YAKCG    A+++F  + H + V W+ MI  Y Q G  EEALNLF      + 
Sbjct: 146 GSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY 205

Query: 372 -ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            I  +  T +S+LR  +      LGKQ+H    ++ F S+ F  S+L+ +Y+K G ++  
Sbjct: 206 DIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGG 265

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F+E+  RN+  WNA++ ACAQ+     T + FE+M + G +P+ ++ L +L ACSH 
Sbjct: 266 YKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHA 325

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+E+G   F  M +++ + P  +HYA++VD+L R+G  +EA  ++ +MP +P E +W +
Sbjct: 326 GLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGA 384

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++  CRIH N E A   AD++F+M  +  +   V +SN YA AG+WE  ++ +K MR++G
Sbjct: 385 LLTGCRIHGNTELASFVADKVFEMGAV-SSGIQVLLSNAYAAAGRWEEAARARKMMRDQG 443

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           ++K T  SWVE  ++VH F A D  H +T EI  K+E L +EM K GY  DTS  L + D
Sbjct: 444 IKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVD 503

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
            + K ++++YHSERLAIAF LI  P   PI VMKNLR C DCH AIK ISK TGR I VR
Sbjct: 504 GDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVR 563

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D++RFH F+DG C+C D+W
Sbjct: 564 DNNRFHRFEDGKCTCGDYW 582



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 191/376 (50%), Gaps = 5/376 (1%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +Q+H  +IK G+ +I ++C+ L++ Y K      + ++F   P K + +++++I+ FA+ 
Sbjct: 27  LQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQN 86

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
            L   A++ F  M   G  P D T   A  +   L+ + L   +HA  +KT    +VFV 
Sbjct: 87  DLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVG 146

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           ++L+D Y+K   V  ARK+F EMP  + VS++ MI  Y+     +E+L LF+      +D
Sbjct: 147 SSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYD 206

Query: 273 --RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              + F  S++L V +     ++G+Q+H     T+  S   VA+SL+ +Y+KCG  E   
Sbjct: 207 IRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGY 266

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F  +   +   W AM+ A  Q  +      LF EM R  +  +  TF  +L A +   
Sbjct: 267 KVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAG 326

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALI 449
            +  G+     +   G        + L+D+  ++G L++A+   KEMP +   S W AL+
Sbjct: 327 LVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALL 386

Query: 450 SACAQNGDAQATLKSF 465
           + C  +G+ +  L SF
Sbjct: 387 TGCRIHGNTE--LASF 400



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 170/352 (48%), Gaps = 4/352 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K+    ++ +LF+S   ++A +W+ +I  ++Q +    A + F  M   G   P
Sbjct: 48  LINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHG-LLP 106

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T  T     +   +    + +HA  +K  ++  + + +SLVD+Y K   ++LAR+VF
Sbjct: 107 DDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVF 166

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGLAD 189
            EMP K+ VS++ +I G+++ GL+EEA+ LF     Q    + +DFT ++ L        
Sbjct: 167 DEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTL 226

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             LG+QVH    KT+F  + FVA++L+ LYSK   V    K+F E+   +   +N M+  
Sbjct: 227 FELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIA 286

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
            A +     + +LF E++      +   F  LL   ++   ++ G               
Sbjct: 287 CAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPG 346

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            +   +LVD+  + G+ EEA  +   +    T   W A+++     GN E A
Sbjct: 347 SQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELA 398



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 12/167 (7%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G QLH  VI+ GF +       L++ Y+K+     +++ F   P ++  +W+++IS
Sbjct: 22  SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
           + AQN      L+ F  M++ G  PD  +L +   +      +        +++      
Sbjct: 82  SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKS------VAALSSLPLALSLHALSL 135

Query: 511 PKKEHY-----ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
               H+     +S+VD   + G  + A K+  +MP + + + WS +I
Sbjct: 136 KTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHK-NVVSWSGMI 181


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 361/660 (54%), Gaps = 44/660 (6%)

Query: 92  LIQVHADIIKFGYNSILIICNSLVDSYCK--IRCLDLARRVFKEMPQKDSVSFNALITGF 149
           L Q+H  +++ G+     +  +L+  Y        D A +VF  +P  +   +N +I G 
Sbjct: 49  LTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            +     +AI  +  M  +  +P+ FT+     A      +  GRQ+H  VVK     +V
Sbjct: 109 LENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDV 167

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            + +A + +Y+    + +ARK+F    E D V +N MI  Y      + +  LF      
Sbjct: 168 HIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLF------ 220

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
               +Q P                             +  +   N +++  AK G   +A
Sbjct: 221 ----AQMP-----------------------------VKNIGSWNVMINGLAKGGNLGDA 247

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
           +++F  +S    + W++M+  Y+  G  +EAL +F +M R      +   +S+L A + +
Sbjct: 248 RKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            ++  G+ +H+++ R+    +   G+ALLDMYAK G L    + F+EM ER I +WNA+I
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              A +G A+  L+ F  + +   +P+ ++L+ VL+AC+H G +++GL+ F +M + Y +
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P+ EHY  MVD+L RSG F EAE L+  MP +P+  +W +++ +CRIH N + A++   
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGK 487

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
            L ++E  +++  YV +SNIYA  G+++ VS+++K M++RG++ V   S V+L   VH F
Sbjct: 488 ILLELEP-QNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEF 546

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D  HPQ  EI RK++ + + ++  G+ PDTS  L D DEE K  ++ YHSE+LAIAF
Sbjct: 547 KMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAF 606

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            LINT  G  I ++KNLR C DCH+A KLIS+I  REI VRD  R+HHFK+G CSC+DFW
Sbjct: 607 GLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 177/403 (43%), Gaps = 65/403 (16%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           N   A ++F+S+ +     W I+I G  + N+  +A   +  M  D  + P+  T+ TL 
Sbjct: 82  NFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID--ARPNKFTYPTLF 139

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSIL-----------------------------IIC 111
             CS      E  Q+H  ++K G  S +                             ++C
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVC 199

Query: 112 -NSLVDSYCKIRCLDL-------------------------------ARRVFKEMPQKDS 139
            N+++D Y K   L+                                AR++F EM ++D 
Sbjct: 200 WNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE 259

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           +S+++++ G+   G  +EA+++F +MQ    +P  F  ++ L+A   +  I  GR VHA+
Sbjct: 260 ISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           + + +   +  +  ALLD+Y+K   +    ++F EM E +  ++N MI   A + + +++
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-HTQTIVTTAISEVKVANSLVD 318
           L+LF +LQ  R   +      +L+  A+   +  G +I  T         E++    +VD
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439

Query: 319 MYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           +  + G F EA+++  ++    +   W A++ A    GN + A
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLA 482



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 8/240 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N  S N++I+G  K GNL  AR+LF+ M +R  +SW+ ++ GY    +++EA ++F
Sbjct: 223 MPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIF 282

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +  + P     +++L+ CS     ++   VHA + +       ++  +L+D Y K
Sbjct: 283 QQMQRE-ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAK 341

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD+   VF+EM +++  ++NA+I G A  G  E+A++LF ++Q    KP+  T    
Sbjct: 342 CGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGV 401

Query: 181 LS--AGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           L+  A  G  D  L   + +  F      +E+      ++DL  +     EA  L   MP
Sbjct: 402 LTACAHAGFVDKGLRIFQTMREFYGVDPELEHY---GCMVDLLGRSGLFSEAEDLINSMP 458



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 162/343 (47%), Gaps = 18/343 (5%)

Query: 274 SQFPFSTLLSVVANK--LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC--GRFEEA 329
           S+ P  T+L +  +K    LQ   Q+H   + +    +  V+ +L+  YA      F+ A
Sbjct: 27  SKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFA 86

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
            ++F+++ + +   W  +I   ++   L +A+  +  M   +   ++ T+ ++ +A +  
Sbjct: 87  LKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVA 145

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            ++  G+Q+H  V++ G  S+V   SA + MYA  G L+DA + F    E ++V WN +I
Sbjct: 146 QAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMI 204

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
               + G  +A    F  M        +V    +++  +  G + +  + F+ M+++ ++
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFDEMSERDEI 260

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKK 566
                 ++SMVD    +G + EA ++  QM  E   P   + SSV+ +C     ++  + 
Sbjct: 261 S-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
               L +     DA    A+ ++YA  G+ +   +V + M+ER
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER 358


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 364/674 (54%), Gaps = 50/674 (7%)

Query: 79  LLSGCSEPDTANELIQVHADII-----KFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           LL  C+   +  +L ++ A II         N I +    +  S+  +R   L    F  
Sbjct: 27  LLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLS 86

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLADIA 191
            P  +  ++NAL+  F++       I  F     L     P ++TF + L A  GLA + 
Sbjct: 87  FP--NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G++VH FV K     N+FV N+L+DLY K  C   A+KLF EM   D VS+N +I+ Y 
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
           ++    ++  +F  +     +++   +ST++S                            
Sbjct: 205 FSGMVDKARMVFDGM----MEKNLVSWSTMIS---------------------------- 232

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRA 370
                   YA+ G  EEA+++F N+   + V W AMI+ Y Q     +A+ LF +M    
Sbjct: 233 -------GYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEG 285

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            ++ +  T  S+L A A L +L LGK +H F+ R+     +F G+AL DMYAK G + +A
Sbjct: 286 GLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEA 345

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F EM ER+++SW+ +I   A  G A      F +M++ G +P+ +S + +L+AC+H 
Sbjct: 346 KGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHA 405

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+++GL+YF+ M Q Y + PK EHY  +VD+L R+G  D+AE L+  MP +P+ I+W +
Sbjct: 406 GLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGA 465

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++  CRI+K+ E  ++   ++ +++    +   V ++N+YA  G+ +  +  +  MR+  
Sbjct: 466 LLGGCRIYKDAERGERVVWRILELDS-NHSGSLVYLANVYASMGRLDDAASCRLRMRDNK 524

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
             K    SW+E+ + V+ F   D  HPQ+  I   I  L  +MK  GYKP T   +H+ D
Sbjct: 525 SMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNID 584

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K ++L  HSE+LA+AF LINT EG+ I ++KNLR C DCH AIK+ISKI  REI VR
Sbjct: 585 EEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVR 644

Query: 731 DSSRFHHFKDGFCS 744
           D SRFHHFKDG CS
Sbjct: 645 DRSRFHHFKDGKCS 658



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 200/445 (44%), Gaps = 44/445 (9%)

Query: 20  GNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVD-MRTDGGSDPDYVTFA 77
           GNL  +  +FN  +    + ++  L+  +SQ N +      F + +      +PD  TF 
Sbjct: 72  GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           ++L  C+      E  +VH  + K+G  S L + NSLVD Y K+ C  +A+++F EM  +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
           D VS+N LI+G+   G+ ++A  +F  M                                
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMME------------------------------ 221

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
                    +N+   + ++  Y++   + EAR+LF  MP  + VS+N MI  YA NE+Y 
Sbjct: 222 ---------KNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYA 272

Query: 258 ESLKLFRELQFT-RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
           ++++LFR++Q       +     ++LS  A+   L +G+ IH           + + N+L
Sbjct: 273 DAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNAL 332

Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
            DMYAKCG   EAK +F  +     + W+ +I      G   EA N F EM    +  + 
Sbjct: 333 ADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPND 392

Query: 377 ATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
            +F  +L A      +  G +    + +  G    +     ++D+ +++G L  A     
Sbjct: 393 ISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLIN 452

Query: 436 EMP-ERNIVSWNALISACAQNGDAQ 459
            MP + N++ W AL+  C    DA+
Sbjct: 453 SMPMQPNVIVWGALLGGCRIYKDAE 477



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 167/349 (47%), Gaps = 43/349 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N L+  Y K G    A++LF+ MV R  VSW  LI GY       +A  +F    
Sbjct: 161 NLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVF---- 216

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            DG  + + V+++T++SG                                   Y ++  L
Sbjct: 217 -DGMMEKNLVSWSTMISG-----------------------------------YARVGNL 240

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSA 183
           + AR++F+ MP ++ VS+NA+I G+A+     +AI+LF +MQH  G  P+D T  + LSA
Sbjct: 241 EEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSA 300

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  + LG+ +H F+ +      +F+ NAL D+Y+K  CV+EA+ +F EM E D +S+
Sbjct: 301 CAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISW 360

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           +++I   A      E+   F E+     + +   F  LL+   +   +  G +       
Sbjct: 361 SIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ 420

Query: 304 TTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
              I+ +++    +VD+ ++ GR ++A+ +  ++    + + W A++  
Sbjct: 421 VYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 469



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 21/369 (5%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  +N VS + +ISGY + GNL  AR+LF +M  R  VSW  +I GY+Q  ++ +A +LF
Sbjct: 219 MMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELF 278

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M+ +GG  P+ VT  ++LS C+     +    +H  I +      L + N+L D Y K
Sbjct: 279 RQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAK 338

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+  A+ VF EM ++D +S++ +I G A  G   EA   F EM   G +P+D +F   
Sbjct: 339 CGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL 398

Query: 181 LSA--GVGLADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           L+A    GL D  L       QV+    K            ++DL S+   + +A  L  
Sbjct: 399 LTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY------GCVVDLLSRAGRLDQAESLIN 452

Query: 234 EMP-EVDGVSYNVMI-TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
            MP + + + +  ++  C  + +  +    ++R L+          +   +     +LD 
Sbjct: 453 SMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDD 512

Query: 292 QIG---RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMI 348
                 R    +++ T   S +++ NS+ + +       ++  I+   S I  + W   +
Sbjct: 513 AASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIY---SMIRELKWKMKV 569

Query: 349 SAYVQKGNL 357
           + Y  K +L
Sbjct: 570 AGYKPKTDL 578


>gi|242047556|ref|XP_002461524.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
 gi|241924901|gb|EER98045.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
          Length = 867

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 260/792 (32%), Positives = 411/792 (51%), Gaps = 55/792 (6%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD---MR 64
           ++N ++  Y+++G LA AR++F+ M  R A S++ LI G+++      A         MR
Sbjct: 77  ASNAVMCAYLRAGRLADARDVFDRMPARDAASYSALISGHARLGGGGAAAAAAELLGRMR 136

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P   TF  LL+ C+         QVHA + K G+ S L++ N+L+  Y K    
Sbjct: 137 LADGLLPTEYTFVGLLTACARRGNPRLGTQVHALVAKSGHASSLLVANALLGMYVKCGRF 196

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALSA 183
             A R F  M ++D  S+NA++ G  + G +EEA +LF EM+  G   +D FT +A L+A
Sbjct: 197 GDALRAFDGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEMRASGNVRADRFTLSALLAA 256

Query: 184 -GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE--------------- 227
            G G      G  VHA  +K+    ++ V NAL+  Y++H   V+               
Sbjct: 257 AGEGFGQ-PQGEAVHALSLKSGLETDLSVGNALIGFYAEHGASVDDVVSVFQRMPVKDVI 315

Query: 228 -----------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKE----------SL 260
                            A  +F  MP+ + V+YN ++T +  N++              L
Sbjct: 316 SWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCQNKEGVRVTFAKKAGFRGL 375

Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
            LFR++     + S    + +L+  A   D +   Q+H   I    +S   +  +L+DM 
Sbjct: 376 GLFRQMVEAGLEISDVTVTGVLNACAIAADRKASEQVHAFVIKCGCVSSPWIDAALIDMC 435

Query: 321 AKCGRFEEAKEIFANLSHIST--VPWTAMISAYVQKGNLEEALNLFIEMCRANISA--DQ 376
            KCGR  +A  +F    H  +  + W +++ A V+ G  E+AL+ F++M R++     D+
Sbjct: 436 IKCGRSGDAHLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALSTFLQMFRSSGVEFIDE 495

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
               ++L     L    LGKQ+HSF  +SG +     G+A++ MY K G LKDA   F+ 
Sbjct: 496 FMLTAVLGVCGSLGFAELGKQMHSFTAKSGLLCARGVGNAIISMYGKCGELKDAGSFFEG 555

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL--IE 494
           M  R++VSWNA+I+A   +      LK + +M +   +PDS++ L V+SACSH      +
Sbjct: 556 MTCRDLVSWNAMITAHLLHHQGDEILKIWSEMERLMVRPDSITFLLVISACSHTSSDSTQ 615

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +    F +M   Y + P  EHYA+ V +L   G FD+AE+L+  MP +P  ++W S+++S
Sbjct: 616 KCRDLFLTMPSTYGIEPAMEHYAAFVYVLGCWGHFDDAEQLIGGMPLKPGALVWRSLLDS 675

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           C  H N+   ++A   L  +E  +D + YV  SN+ + + +W S    +  MRE+G+RK+
Sbjct: 676 CSKHSNMAVRRRAMKHLLALEP-QDPSTYVLTSNLLSESARWHSSENRRLEMREKGMRKI 734

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
            A SW    + VH F A D  HPQ+ +I   ++ L+ E  K GY+PDT+  LHD +E  K
Sbjct: 735 PARSWTFHGNMVHSFFARDRTHPQSRDIYAGLDVLILECIKAGYEPDTTFVLHDVEEYQK 794

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
              L YHS +LA  + L+    G  + V+KN+R C DCH+ ++  S  TG+ I+VRDSS 
Sbjct: 795 RHFLMYHSVKLASMYGLLMAGPGQTVRVVKNIRMCGDCHSFLEHASAATGKVISVRDSSG 854

Query: 735 FHHFKDGFCSCR 746
           FH F++G CSCR
Sbjct: 855 FHIFREGKCSCR 866



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 123/255 (48%), Gaps = 8/255 (3%)

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
           A  + + +N+++  Y + GR  +A+++F  +       ++A+IS + + G    A     
Sbjct: 71  ASPDARASNAVMCAYLRAGRLADARDVFDRMPARDAASYSALISGHARLGGGGAAAAAAE 130

Query: 366 EMCRANIS----ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            + R  ++      + TF  +L A A   +  LG Q+H+ V +SG  S++   +ALL MY
Sbjct: 131 LLGRMRLADGLLPTEYTFVGLLTACARRGNPRLGTQVHALVAKSGHASSLLVANALLGMY 190

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSL 480
            K G   DA++ F  M  R++ SWNA+++   + G  +   + F +M  SG  + D  +L
Sbjct: 191 VKCGRFGDALRAFDGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEMRASGNVRADRFTL 250

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC-FDEAEKLMAQM 539
            ++L+A    G  +   +  ++++ K  L        +++      G   D+   +  +M
Sbjct: 251 SALLAAAGE-GFGQPQGEAVHALSLKSGLETDLSVGNALIGFYAEHGASVDDVVSVFQRM 309

Query: 540 PFEPDEIMWSSVINS 554
           P + D I W+ ++N 
Sbjct: 310 PVK-DVISWTGLLNG 323


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 340/587 (57%), Gaps = 32/587 (5%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           +Q+HA ++KTN   +    + +  + + +     A+ +F  +   +   +N  +  +A  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
           +   +++ LF  L+        +  S +L   +  LD++ G+ +H         S + + 
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 314 NSLVDMYAKCGRF-------------------------------EEAKEIFANLSHISTV 342
           N +V +YA CG                                 E A ++FA +   +  
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            WT+MI  Y Q G  +EA++LF+EM  A +  ++ T  ++L A A++ +L LG+++H F 
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
            RSG+  N+   + L+DMY K G L+DA + F  M ER +VSW+A+I+  A +G A+  L
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M+ +G +P++V+ + +L ACSH G++E+G +YF SMT+ Y + P+ EHY  MVD+
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDL 391

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             R+G   EA + +  MP  P+ ++W +++  C++HKN++ A++A   L K++ L D   
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGY- 450

Query: 583 YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEI 642
           YV +SNIYA AG+WE V++V+K MR+RGV+K   +S + ++  V+ F A D+ HPQT EI
Sbjct: 451 YVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEI 510

Query: 643 RRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILV 702
            +  E L+Q MK +GY P+TS  L D +E+ K + L  HSE+LA+ F LI T  G+ I +
Sbjct: 511 FQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRI 570

Query: 703 MKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           MKNLR C DCHAA+K+IS ++ REI VRD +RFH FK+G CSC D+W
Sbjct: 571 MKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 37/397 (9%)

Query: 91  ELIQVHADIIKFGYNSILI-ICNSLVDSYCKIRC-LDLARRVFKEMPQKDSVSFNALITG 148
           EL Q+HA ++K   NS L  +  S V S C        A+ +F+ +   +   +N  +  
Sbjct: 30  ELKQLHAHLLK--TNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRS 87

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           FA+     +AI LF  ++     P  +T +  L A   L D+  G+ VH +V K     N
Sbjct: 88  FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT-------------------- 248
           +F+ N ++ LY+    +  ARK+F +MP+ D +++N+MI                     
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207

Query: 249 -----------CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
                       YA   + KE++ LF E++      ++     +L   A+  +L +GR+I
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H  +  +     ++V N+L+DMY KCG  E+A  IF N+   + V W+AMI+     G  
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSA 416
           E+AL LF +M    +  +  TF  IL A + +  +  G++  + + R  G +  +     
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++D+++++G L++A +    MP   N V W AL+  C
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 7/251 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ ++ N++I+  VK G+   A +LF  M +R   SWT +IGGY+Q  + +EA  LF
Sbjct: 174 MPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLF 233

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSY 118
           ++M  D G  P+ VT   +L  C+  D  N ++  ++H    + GY   + +CN+L+D Y
Sbjct: 234 LEME-DAGLLPNEVTVVAVLVACA--DMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMY 290

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K  CL+ A R+F  M ++  VS++A+I G A  G  E+A+ LF +M + G KP+  TF 
Sbjct: 291 VKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFI 350

Query: 179 AALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP- 236
             L A   +  +  GR+  A + +    V  +     ++DL+S+   + EA +    MP 
Sbjct: 351 GILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPI 410

Query: 237 EVDGVSYNVMI 247
             +GV +  ++
Sbjct: 411 APNGVVWGALL 421



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 180/369 (48%), Gaps = 37/369 (10%)

Query: 27  ELFNSMVDRTAVS-WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSE 85
           +L   ++D + V+ W   +  +++ +   +A  LF  +R    S PD+ T + +L  CS 
Sbjct: 67  KLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDIS-PDHYTCSFVLKACSR 125

Query: 86  P-DTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFN- 143
             D  N  I VH  + K G  S + + N +V  Y     + +AR+VF +MPQ+D +++N 
Sbjct: 126 LLDVRNGKI-VHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNI 184

Query: 144 ------------------------------ALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
                                         ++I G+A+ G ++EAI LF+EM+  G  P+
Sbjct: 185 MIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPN 244

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           + T  A L A   + ++ LGR++H F  ++ + +N+ V N L+D+Y K  C+ +A ++F 
Sbjct: 245 EVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFD 304

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            M E   VS++ MI   A + + +++L LF ++  T    +   F  +L   ++   ++ 
Sbjct: 305 NMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEK 364

Query: 294 GRQ-IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAY 351
           GR+   + T     +  ++    +VD++++ G  +EA E   N+    + V W A++   
Sbjct: 365 GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424

Query: 352 VQKGNLEEA 360
               N++ A
Sbjct: 425 KVHKNIKLA 433


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 296/469 (63%), Gaps = 3/469 (0%)

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
           SV+   L +    ++H Q + T       V  +L+D Y K G+ EEA ++F+ +     V
Sbjct: 5   SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 64

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL-ASLSLGKQLHSF 401
            W+AM++ Y Q G  E A+ +F E+ +  I  ++ TF+SIL   A   AS+  GKQ H F
Sbjct: 65  AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 124

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            I+S   S++   SALL MYAK G+++ A + FK   E+++VSWN++IS  AQ+G A   
Sbjct: 125 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 184

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
           L  F++M +   + D V+ + V +AC+H GL+EEG +YF+ M +  K+ P KEH + MVD
Sbjct: 185 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 244

Query: 522 ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
           +  R+G  ++A K++  MP      +W +++ +CR+HK  E  + AA+++  M K  D+A
Sbjct: 245 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM-KPEDSA 303

Query: 582 PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
            YV +SN+YA +G W+  ++V+K M ER V+K   YSW+E+K+K + F A D  HP  ++
Sbjct: 304 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 363

Query: 642 IRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPIL 701
           I  K+E+L   +K  GY+PDTS  L D D+E K   L  HSERLAIAF LI TP+GSP+L
Sbjct: 364 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 423

Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHF-KDGFCSCRDFW 749
           ++KNLR C DCH  IKLI+KI  REI VRDS+RFHHF  DG CSC DFW
Sbjct: 424 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 147/282 (52%), Gaps = 7/282 (2%)

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           +FT++  L+A      +    +VHA VVKTN+  +  V  ALLD Y K   V EA K+F 
Sbjct: 1   EFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQ 292
            + + D V+++ M+  YA   + + ++K+F EL       ++F FS++L+V  A    + 
Sbjct: 57  GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
            G+Q H   I +   S + V+++L+ MYAK G  E A+E+F        V W +MIS Y 
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           Q G   +AL++F EM +  +  D  TF  +  A      +  G++    ++R   ++   
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236

Query: 413 S-GSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISAC 452
              S ++D+Y+++G L+ A++  + MP       W  +++AC
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 278



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 59/409 (14%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           +VHA ++K  Y     +  +L+D+Y K+  ++ A +VF  +  KD V+++A++ G+A+ G
Sbjct: 18  EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL-ADIALGRQVHAFVVKTNFVENVFVA 212
             E AIK+F E+   G KP++FTF++ L+      A +  G+Q H F +K+    ++ V+
Sbjct: 78  ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           +ALL +Y+K   +  A ++F    E D VS+N MI+ YA + Q  ++L +F+E++  +  
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 197

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKE 331
                F  + +   +   ++ G +     +    I+  K  NS +VD+Y++ G+ E+A +
Sbjct: 198 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 257

Query: 332 IFANLSH-ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +  N+ +   +  W  +++A                 CR +   +      + R +AE  
Sbjct: 258 VIENMPNPAGSTIWRTILAA-----------------CRVHKKTE------LGRLAAEKI 294

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI-----VSW 445
                +   ++V+             L +MYA+SG  ++  +  K M ERN+      SW
Sbjct: 295 IAMKPEDSAAYVL-------------LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSW 341

Query: 446 ----NALISACAQNGDAQATLK-----SFEDMVQS----GYQPDSVSLL 481
               N   S  A  GD    LK       ED+       GY+PD+  +L
Sbjct: 342 IEVKNKTYSFLA--GDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVL 388



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 4/238 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +TV T  L+  YVK G +  A ++F+ + D+  V+W+ ++ GY+Q  +   A K+F ++ 
Sbjct: 32  STVGT-ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL- 89

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           T GG  P+  TF+++L+ C+  + +  +  Q H   IK   +S L + ++L+  Y K   
Sbjct: 90  TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 149

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ A  VFK   +KD VS+N++I+G+A+ G   +A+ +F EM+    K    TF    +A
Sbjct: 150 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 209

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANA-LLDLYSKHDCVVEARKLFGEMPEVDG 240
                 +  G +    +V+   +      N+ ++DLYS+   + +A K+   MP   G
Sbjct: 210 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 267


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/583 (36%), Positives = 342/583 (58%), Gaps = 5/583 (0%)

Query: 170 FKP---SDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
           F P   + + + + L + +    +  G+Q+HA         N  +A  L+ LY+  + ++
Sbjct: 40  FPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLL 99

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            AR LF ++P+ +   +NV+I  YAWN  +  ++ L+ ++         F    +L   +
Sbjct: 100 NARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS 159

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               +  GR IH   I +    ++ V  +L+DMYAKCG   +A  +F  +     V W +
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNS 219

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           M++AY Q G+ +E+++L  EM    +   +AT  +++ +SA++A L  G+++H F  R G
Sbjct: 220 MLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHG 279

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           F SN    +AL+DMYAK GS+K A+  F+ + E+ +VSWNA+I+  A +G A   L  F+
Sbjct: 280 FQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFD 339

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M +   +PD ++ + VL+ACS   L++EG   +N M + Y + P  +HY  M+D+L   
Sbjct: 340 KMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC 398

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
           G  DEA  L+  M  +PD  +W +++NSC+IH N+E A+ A ++L ++E   D+  YV +
Sbjct: 399 GQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEP-DDSGNYVIL 457

Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
           +N+YA +G+WE V ++++ M ++ ++K  A SW+E+K+KV+ F A D  H  ++ I  ++
Sbjct: 458 ANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAEL 517

Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
           + L   M + GY PDT    HD +E+ K   +  HSERLAIAF LI+T  G+ +L+ KNL
Sbjct: 518 KRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNL 577

Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           R C DCH AIK ISKI  REITVRD +R+H FK G CSC D W
Sbjct: 578 RICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 203/407 (49%), Gaps = 13/407 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFG--YNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           + +LL  C +    N   Q+HA     G  YN  L     LV  Y     L  AR +F +
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDL--ATKLVHLYAVSNSLLNARNLFDK 107

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           +P+++   +N LI G+A  G ++ AI L+ +M   G +P +FT    L A   L+ I  G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R +H +V+K+ +  ++FV  AL+D+Y+K  CV++A ++F ++   D V +N M+  YA N
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
               ES+ L RE+       ++    T++S  A+   L  GR+IH         S  KV 
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK 287

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +L+DMYAKCG  + A  +F  L     V W A+I+ Y   G    AL+LF +M R    
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKEDR 346

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            D  TF  +L A +    L  G+ L++ ++R  G    V   + ++D+    G L +A  
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406

Query: 433 TFKEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
             + M   P+  +  W AL+++C  +G+ +    + E +++   +PD
Sbjct: 407 LIRNMSVKPDSGV--WGALLNSCKIHGNVELAELALEKLIE--LEPD 449



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 6/352 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y  S +L  AR LF+ +  +    W +LI GY+       A  L+  M  D G  P
Sbjct: 88  LVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKM-LDYGLRP 146

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T   +L  CS      E   +H  +IK G+   L +  +L+D Y K  C+  A RVF
Sbjct: 147 DNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVF 206

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            ++  +D+V +N+++  +A+ G  +E+I L  EM   G +P++ T    +S+   +A + 
Sbjct: 207 DKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLP 266

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            GR++H F  +  F  N  V  AL+D+Y+K   V  A  LF  + E   VS+N +IT YA
Sbjct: 267 YGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYA 326

Query: 252 WNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE- 309
            +     +L LF +++  + DR     F  +L+  +    L  GR ++   +    I+  
Sbjct: 327 MHGLAVGALDLFDKMR--KEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPT 384

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           V+    ++D+   CG+ +EA ++  N+S    +  W A++++    GN+E A
Sbjct: 385 VQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELA 436


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/667 (33%), Positives = 367/667 (55%), Gaps = 49/667 (7%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRC-----LDLARRVFKEMPQKDSVSFNA 144
           + L Q HA I++ G+     I  SLV SY  +        + + RVF  + + +   +N 
Sbjct: 48  HHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNC 107

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +I    +     +AI L+ EM    F+P+ +T+ A L A      +A G QVHA +VK  
Sbjct: 108 MIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHG 167

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLF 263
              +  + ++ + +Y+    +VEAR++  +   EVD V +N MI  Y    + + + +LF
Sbjct: 168 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 227

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
             +     DRS                                   +   N+++  +++C
Sbjct: 228 EGMP----DRSM----------------------------------ISTWNAMISGFSRC 249

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G  E A+E F  +     + W+AMI  Y+Q+G   EAL +F +M +  I   +    S+L
Sbjct: 250 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 309

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A A L +L  G+ +H++  R+    +   G++L+DMYAK G +  A + F++M  + + 
Sbjct: 310 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 369

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SWNA+I   A +G A+  +  F  M      P+ ++ + VL+AC+H GL+++GL  FNSM
Sbjct: 370 SWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSM 426

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            ++Y + P+ EHY  +VD+L R+G   EAEK+++ +P EP   +W +++ +CR H N+E 
Sbjct: 427 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 486

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL- 622
            ++    L ++E  +++  Y  +SNIYA AG+WE V +V+K M+ERG++     S ++L 
Sbjct: 487 GERVGKILLELEP-QNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLG 545

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
           + +VH F   D  HPQ  +I + ++ + + ++ EGY+PD S  L D DEE K  ++  HS
Sbjct: 546 RGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHS 605

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E+LAI F LINT  G+ I ++KNLR C DCH+A KLIS++  REI VRD  R+HHF++G 
Sbjct: 606 EKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGA 665

Query: 743 CSCRDFW 749
           CSC+DFW
Sbjct: 666 CSCKDFW 672



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 53/357 (14%)

Query: 1   MPNQNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           MP+++ +ST N +ISG+ + G +  ARE F+ M +R  +SW+ +I GY Q+  F EA ++
Sbjct: 230 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 289

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M+ +    P      ++LS C+     ++   +H    +       ++  SLVD Y 
Sbjct: 290 FHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 348

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   +DLA  VF++M  K+  S+NA+I G A  G  E+AI LF +M      P++ TF  
Sbjct: 349 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVG 405

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            L+A      +  G  +   + K   VE  +     ++DL  +   + EA K+   +P  
Sbjct: 406 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPT- 464

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
                                            + +   +  LL       ++++G +  
Sbjct: 465 ---------------------------------EPTPAVWGALLGACRKHGNVELGER-- 489

Query: 299 TQTIVTTAISEVKVANS-----LVDMYAKCGRFEEAKEIFANLSH--ISTVPWTAMI 348
               V   + E++  NS     L ++YAK GR+EE  E+   +    I T P T++I
Sbjct: 490 ----VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 542



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 155/314 (49%), Gaps = 23/314 (7%)

Query: 56  AFKLFVDMRT---DGGSDPDYVTFATLLSGC---SEPDTANELIQVHADIIKFGYNSILI 109
           +F   V+ R    D G + D V +  ++ G     E + A EL +   D       S++ 
Sbjct: 184 SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPD------RSMIS 237

Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
             N+++  + +   +++AR  F EM ++D +S++A+I G+ +EG   EA+++F +MQ   
Sbjct: 238 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 297

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            +P  F   + LSA   L  +  GR +H +  + +   +  +  +L+D+Y+K   +  A 
Sbjct: 298 IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAW 357

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           ++F +M   +  S+N MI   A + + ++++ LF ++     + ++  F  +L+  A+  
Sbjct: 358 EVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGG 414

Query: 290 DLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----W 344
            +Q G  I         +  +++    +VD+  + G   EA+++   +S I T P    W
Sbjct: 415 LVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV---VSSIPTEPTPAVW 471

Query: 345 TAMISAYVQKGNLE 358
            A++ A  + GN+E
Sbjct: 472 GALLGACRKHGNVE 485


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/560 (37%), Positives = 322/560 (57%), Gaps = 6/560 (1%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV---DGVSYNVMITCYA 251
           Q+H  ++K  F  N  V        S  D +  A  L   + +    D   ++ +I  YA
Sbjct: 25  QLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYA 84

Query: 252 WNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
            + Q K +   +  L        +++ F  +L   A   DL +G+ +H   +      ++
Sbjct: 85  ESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDI 144

Query: 311 KVANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            V N++V MY  C G  E A+++F  +  +  V WTAMI  Y + G    A+ LF +M  
Sbjct: 145 FVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQI 204

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
           A +  D  T  S+L A  +L +L LGK + S++ +   +  V   +AL+DM+AK G +  
Sbjct: 205 AGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDK 264

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A+  F+ M +R IVSW ++I   A +G     +  FE+M  SG  P+ ++ + +LSACSH
Sbjct: 265 ALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSH 324

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+E G QYF+ MT+++ + PK EHY  MVD+L R+G   EA + + +MP EP+ I+W 
Sbjct: 325 SGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWR 384

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           ++I++CR+H  L+  +  + QL + E + ++  YV +SNIY     WE  S+++ AM ++
Sbjct: 385 TLISACRVHGELKLGESISKQLIRNEPMHESN-YVLLSNIYGKMLDWEKKSKIRVAMGKK 443

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           G++KV   + +EL +++H F   D  H Q NEI + +  + +EMK+ GY P T+    D 
Sbjct: 444 GIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDI 503

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           DEE K ++L  HSE+LAIAFAL+NTP GSPI + KNLR C DCH+A K ISKI  REI +
Sbjct: 504 DEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVM 563

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD SRFHHF+DG CSC DFW
Sbjct: 564 RDRSRFHHFRDGQCSCGDFW 583



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 197/386 (51%), Gaps = 10/386 (2%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV---FKEMP 135
           +L  C   +T  +L Q+H  IIK G+ +  ++      +   +  +  A  +    ++  
Sbjct: 13  ILQAC---NTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDAR 69

Query: 136 QKDSVSFNALITGFAKEGLNEE-AIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
             D+  F+ +I  +A+   ++  AI  +  M   G  P+ + F   L A  GL D+ LG+
Sbjct: 70  VYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGK 129

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWN 253
            VH  +VK  F +++FV N ++ +Y      +E ARKLF EMP++D V++  MI  YA  
Sbjct: 130 AVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARL 189

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            Q   ++ LFR++Q            ++LS   +   L++G+ I +       +  V+++
Sbjct: 190 GQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS 249

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
           N+LVDM+AKCG  ++A  +F N+S  + V WT++I      G   EA++LF EM  + + 
Sbjct: 250 NALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMV 309

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            +   F  +L A +    +  G+Q  S + R  G +  +     ++D+ +++G + +A++
Sbjct: 310 PEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALE 369

Query: 433 TFKEMP-ERNIVSWNALISACAQNGD 457
             + MP E N + W  LISAC  +G+
Sbjct: 370 FVERMPIEPNPIIWRTLISACRVHGE 395



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 166/328 (50%), Gaps = 9/328 (2%)

Query: 37  AVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVH 96
           A  ++ +I  Y++ +Q +     + ++    G  P+   F  +L  C+     N    VH
Sbjct: 73  AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVH 132

Query: 97  ADIIKFGYNSILIICNSLVDSYCKIRC----LDLARRVFKEMPQKDSVSFNALITGFAKE 152
             ++KFG++  + + N++V  YC   C    ++ AR++F EMP+ D V++ A+I G+A+ 
Sbjct: 133 GSLVKFGFDDDIFVQNTMVHMYC---CCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARL 189

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
           G +  A+ LF +MQ  G  P D T  + LSA   L  + LG+ + +++ K   ++ V ++
Sbjct: 190 GQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS 249

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           NAL+D+++K   V +A  LF  M +   VS+  +I   A + +  E++ LF E++ +   
Sbjct: 250 NALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMV 309

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKE 331
                F  LLS  ++   ++ GRQ  ++      I  +++    +VD+ ++ G   EA E
Sbjct: 310 PEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALE 369

Query: 332 IFANLS-HISTVPWTAMISAYVQKGNLE 358
               +    + + W  +ISA    G L+
Sbjct: 370 FVERMPIEPNPIIWRTLISACRVHGELK 397



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 3/232 (1%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFAT 78
           SG +  AR+LF+ M     V+WT +IGGY++  Q   A  LF  M+   G  PD VT  +
Sbjct: 158 SGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQI-AGVCPDDVTMVS 216

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           +LS C++         + + I K      + + N+LVD + K   +D A  +F+ M ++ 
Sbjct: 217 VLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRT 276

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+ ++I G A  G   EA+ LF EM+  G  P D  F   LSA      +  GRQ  +
Sbjct: 277 IVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFS 336

Query: 199 FVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMIT 248
            + +    V  +     ++DL S+   V EA +    MP E + + +  +I+
Sbjct: 337 EMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLIS 388


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/658 (34%), Positives = 377/658 (57%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G +  AR +F+ +  R  + W +++ GY +   F  A   F +MRT   S  
Sbjct: 153 LIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSY-SMV 211

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VT+  +LS C+         Q+H  +I  G+     + N+LV  Y K   L  AR++F
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MPQ D+V++N LI G+ + G  +EA  LF  M   G KP   TFA+ L + +    + 
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 331

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             ++VH+++V+     +V++ +AL+D+Y K   V  ARK+F +   VD      MI+ Y 
Sbjct: 332 HCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYV 391

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +    +++  FR L       +    +++L   A    L+ G+++H   +     + V 
Sbjct: 392 LHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVN 451

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V +++ DMYAKCGR + A E F  +S   +V W +MIS++ Q G  E A++LF +M  + 
Sbjct: 452 VGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSG 511

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + +S L A+A L +L  GK++H +VIR+ F S+ F  S L+DMY+K G+L  A 
Sbjct: 512 AKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAW 571

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M  +N VSWN++I+A   +G  +  L  + +M+++G  PD V+ L ++SAC H G
Sbjct: 572 CVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAG 631

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L++EG+ YF+ MT++Y +  + EHYA MVD+  R+G   EA   +  MPF PD  +W ++
Sbjct: 632 LVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTL 691

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E AK A+  L +++  +++  YV +SN++A AG+W SV +V+  M+E+GV
Sbjct: 692 LGACRLHGNVELAKLASRHLLELDP-KNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGV 750

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           +K+  YSW+++    H+F+A D  HP++ EI   +++L+ E++K+GY P     LH +
Sbjct: 751 QKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPLHPQ 808



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 226/463 (48%), Gaps = 1/463 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YV  G    A  LF  +  R A+ W  +I G      F  A   +  M     S PD  T
Sbjct: 56  YVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS-PDKYT 114

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  ++  C   +     + VH      G++  L   ++L+  Y     +  ARRVF E+P
Sbjct: 115 FPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELP 174

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D++ +N ++ G+ K G  + AI  F EM+      +  T+   LS      +   G Q
Sbjct: 175 LRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQ 234

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H  V+ + F  +  VAN L+ +YSK   ++ ARKLF  MP+ D V++N +I  Y  N  
Sbjct: 235 LHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGF 294

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             E+  LF  +           F++ L  +     L+  +++H+  +      +V + ++
Sbjct: 295 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSA 354

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y K G  E A++IF     +     TAMIS YV  G   +A+N F  + +  +  +
Sbjct: 355 LIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTN 414

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             T AS+L A A +A+L  GK+LH  +++    + V  GSA+ DMYAK G L  A + F+
Sbjct: 415 SLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFR 474

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            M +R+ V WN++IS+ +QNG  +  +  F  M  SG + DSV
Sbjct: 475 RMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 226/452 (50%), Gaps = 3/452 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K GNL  AR+LFN+M     V+W  LI GY Q     EA  LF  M    G 
Sbjct: 252 NTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAM-ISAGV 310

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VTFA+ L    E  +     +VH+ I++      + + ++L+D Y K   +++AR+
Sbjct: 311 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARK 370

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F++    D     A+I+G+   GLN +AI  F  +   G   +  T A+ L A   +A 
Sbjct: 371 IFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAA 430

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+++H  ++K      V V +A+ D+Y+K   +  A + F  M + D V +N MI+ 
Sbjct: 431 LKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISS 490

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           ++ N + + ++ LFR++  +         S+ LS  AN   L  G+++H   I     S+
Sbjct: 491 FSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSD 550

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             VA++L+DMY+KCG    A  +F  +   + V W ++I+AY   G   E L+L+ EM R
Sbjct: 551 TFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLR 610

Query: 370 ANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           A I  D  TF  I+ A      +  G    H      G  + +   + ++D+Y ++G + 
Sbjct: 611 AGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVH 670

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +A  T K MP   +   W  L+ AC  +G+ +
Sbjct: 671 EAFDTIKSMPFTPDAGVWGTLLGACRLHGNVE 702



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 238/477 (49%), Gaps = 2/477 (0%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           +L   CS+     +  QVH  +I  G   +    + ++  Y        A  +F E+  +
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVH 197
            ++ +N +I G    G  + A+  + +M      P  +TF   + A  GL ++ L   VH
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 198 AFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
                  F  ++F  +AL+ LY+ +  + +AR++F E+P  D + +NVM+  Y  +  + 
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
            ++  F E++ +    +   ++ +LS+ A + +   G Q+H   I +    + +VAN+LV
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLV 255

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
            MY+KCG    A+++F  +    TV W  +I+ YVQ G  +EA  LF  M  A +  D  
Sbjct: 256 AMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 315

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TFAS L +  E  SL   K++HS+++R     +V+  SAL+D+Y K G ++ A + F++ 
Sbjct: 316 TFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQN 375

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
              ++    A+IS    +G     + +F  ++Q G   +S+++ SVL AC+    ++ G 
Sbjct: 376 ILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGK 435

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           +    + +K +L       +++ D+  + G  D A +   +M  + D + W+S+I+S
Sbjct: 436 ELHCHILKK-RLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMISS 490



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 2/160 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + +T   + LI  Y K GNLA A  +FN M  +  VSW  +I  Y      RE   L+ +
Sbjct: 548 SSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHE 607

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKI 121
           M    G  PD+VTF  ++S C      +E I   H    ++G  + +     +VD Y + 
Sbjct: 608 M-LRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRA 666

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKL 161
             +  A    K MP          + G  +   N E  KL
Sbjct: 667 GRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKL 706


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/674 (33%), Positives = 375/674 (55%), Gaps = 9/674 (1%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQK 137
           LLS C+   T   L ++HA +I     S   I+ + L  +Y +   L  A       P  
Sbjct: 9   LLSSCAALRT---LTRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65

Query: 138 DSV--SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            S   ++NAL+   ++     EA+++F  +     +P   TF  ALSA   L D+A G  
Sbjct: 66  PSSIPAWNALLAAHSRGASPHEALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEV 124

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           V        +  ++FV +++L+LY+K   + +A K+F  M + D V+++ M+T +    Q
Sbjct: 125 VTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQ 184

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             ++++++  ++    +  +     ++   A   D ++G  +H   +      +V ++ S
Sbjct: 185 PVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTS 244

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           LVDMYAK G F++A+ +F  + H + V W+A+IS   Q GN +EAL LF  M  + +  +
Sbjct: 245 LVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPN 304

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
                  L A ++L  L LGK +H F++R+  +  +  G+A++DMY+K GSL  A   F 
Sbjct: 305 SGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMV-GTAVIDMYSKCGSLSSAQMLFD 363

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
           ++  R+++SWN +I+ C  +G  +  L  F++M ++  +PD  +  S+LSA SH GL+EE
Sbjct: 364 KVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEE 423

Query: 496 GLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
           G  +FN M  +Y + P ++H   +VD+L RSG  +EA  L+A +  +P   +  ++++ C
Sbjct: 424 GKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGC 483

Query: 556 RIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVT 615
             +  LE  +  A+++ +++   D      +SN+YA A  W  V +V+K M++ G +K  
Sbjct: 484 LNNNKLELGESTAEKILELQP-GDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAP 542

Query: 616 AYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKV 675
             S +E++  +H F   D+ HPQ  +I + +  L  EM+K GY P T    HD +E +K 
Sbjct: 543 GCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKE 602

Query: 676 ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRF 735
           + L  HSERLA AF L+NT  G+ ++V+KNLR C DCH AIK +SKI  REI VRD+ RF
Sbjct: 603 QLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRF 662

Query: 736 HHFKDGFCSCRDFW 749
           HHFKDG CSC D+W
Sbjct: 663 HHFKDGACSCGDYW 676



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 179/345 (51%), Gaps = 4/345 (1%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G +  A ++F+ M  R  V+W+ ++ G+    Q  +A ++++ MR DG  + D V 
Sbjct: 148 YAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDG-LEADEVV 206

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
              ++  C+    A     VH  +++      ++I  SLVD Y K    D ARRVF+ MP
Sbjct: 207 IVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMP 266

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            ++ VS++ALI+  A+ G  +EA+ LF  MQ  G  P+      AL A   L  + LG+ 
Sbjct: 267 HRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKS 326

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +H F+++T  ++ + V  A++D+YSK   +  A+ LF ++   D +S+NVMI C   + +
Sbjct: 327 IHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGR 385

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV-KVAN 314
            +++L LF+E++          F++LLS +++   ++ G+      +    I    K   
Sbjct: 386 GRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLV 445

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
            +VD+ A+ G  EEA  + A+L    T+    A++S  +    LE
Sbjct: 446 CIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLE 490



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 2/179 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V +  L+  Y K+G    AR +F  M  R  VSW+ LI   +Q     EA  LF  M+
Sbjct: 238 DVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQ 297

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+       L  CS+         +H  I++       ++  +++D Y K   L
Sbjct: 298 VS-GLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSL 355

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             A+ +F ++  +D +S+N +I      G   +A+ LF EM+    +P   TFA+ LSA
Sbjct: 356 SSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSA 414



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +I  Y K G+L++A+ LF+ +V R  +SW ++I       + R+A  LF +M+ +    P
Sbjct: 345 VIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRN-EVRP 403

Query: 72  DYVTFATLLSGCSEPDTANE 91
           D+ TFA+LLS  S      E
Sbjct: 404 DHATFASLLSALSHSGLVEE 423


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/680 (33%), Positives = 390/680 (57%), Gaps = 13/680 (1%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ LL  C +  + + +  + A ++K G+  + +  + LVD+  K   +  AR++F  M
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGF-PVELSGSKLVDASLKCGEIGYARQLFDGM 107

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
           P++  V++N++I  + K   ++EA++++  M      P ++T ++   A    +D++L +
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKA---FSDLSLEK 164

Query: 195 QV---HAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           +    H   V     V NVFV +AL+D+Y K     EA+ +   + E D V    +I  Y
Sbjct: 165 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 224

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           +   +  E++K F+ +   +   +++ ++++L    N  D+  G+ IH   + +   S +
Sbjct: 225 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 284

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
               SL+ MY +C   +++  +F  + + + V WT++IS  VQ G  E AL  F +M R 
Sbjct: 285 ASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRD 344

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           ++  +  T +S LR  + LA    G+Q+H  V + GF  + ++GS L+++Y K G    A
Sbjct: 345 SVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMA 404

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  + E +++S N +I + AQNG  +  L+ FE M+  G QP+ V++LSVL AC++ 
Sbjct: 405 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNS 464

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+EEG + F+S  +K K+    +HYA MVD+L R+G  +EAE L+ ++   PD ++W +
Sbjct: 465 GLVEEGCELFDSF-RKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWRT 522

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++++C++H+ +E A++   ++ ++    D    + +SN+YA  G+W+ V ++K  M+E  
Sbjct: 523 LLSACKVHRKVEMAERITRKILEIAP-GDEGTLILLSNLYASTGKWKRVIEMKSKMKEMK 581

Query: 611 VRKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           ++K  A SWVE+  + H F A D   HP + +I   +E L+++ K  GY  D SC   D 
Sbjct: 582 LKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDM 641

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +E  K  SL  HSE+LAIAFA+     GS I ++KNLR C DCH+ IK++S+I  REI  
Sbjct: 642 EETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRIIKREIIC 700

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RDS RFHHF+DG CSC D+W
Sbjct: 701 RDSKRFHHFRDGSCSCGDYW 720



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 216/448 (48%), Gaps = 4/448 (0%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +S + L+   +K G +  AR+LF+ M +R  V+W  +I  Y +  + +EA +++  M ++
Sbjct: 82  LSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISN 141

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLD 125
               PD  T +++    S+     E  + H   +  G   S + + ++LVD Y K     
Sbjct: 142 -NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 200

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A+ V   + +KD V   ALI G++++G + EA+K F  M     +P+++T+A+ L +  
Sbjct: 201 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 260

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L DI  G+ +H  +VK+ F   +    +LL +Y +   V ++  +F  +   + V++  
Sbjct: 261 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTS 320

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+    N + + +L  FR++       + F  S+ L   +N    + GRQ+H   +   
Sbjct: 321 LISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHG-IVSKY 379

Query: 306 AISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                K A S L+++Y KCG  + A+ +F  LS +  +    MI +Y Q G   EAL LF
Sbjct: 380 GFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELF 439

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M    +  +  T  S+L A      +  G +L     +   M      + ++DM  ++
Sbjct: 440 ERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRA 499

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISAC 452
           G L++A     E+   ++V W  L+SAC
Sbjct: 500 GRLEEAEMLITEVTNPDLVLWRTLLSAC 527



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 163/346 (47%), Gaps = 1/346 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + L+  YVK G    A+ + + + ++  V  T LI GYSQK +  EA K F  M 
Sbjct: 182 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 241

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +    P+  T+A++L  C           +H  ++K G+ S L    SL+  Y +   +
Sbjct: 242 VEK-VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 300

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D +  VFK +   + V++ +LI+G  + G  E A+  F +M     KP+ FT ++AL   
Sbjct: 301 DDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGC 360

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA    GRQVH  V K  F  + +  + L++LY K  C   AR +F  + EVD +S N
Sbjct: 361 SNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLN 420

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  YA N   +E+L+LF  +       +     ++L    N   ++ G ++       
Sbjct: 421 TMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD 480

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
             +        +VDM  + GR EEA+ +   +++   V W  ++SA
Sbjct: 481 KIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSA 526


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/665 (33%), Positives = 386/665 (58%), Gaps = 3/665 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T   N+LI+   KS  +  AR +F+ M  +  ++W+ ++  YSQ+    EA  +FVD++
Sbjct: 83  DTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ 142

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
              G  P+    A+++  C++     +  Q+H  +++ G++  + +  SL+D Y K   +
Sbjct: 143 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 202

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           + AR VF ++ +K +V++  +I G+ K G +  +++LF +M+     P  +  ++ LSA 
Sbjct: 203 EEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC 262

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             L  +  G+Q+HA+V++     +V V N L+D Y+K + V   RKLF +M   + +S+ 
Sbjct: 263 SMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWT 322

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI+ Y  N    E++KLF E+    +    F  +++L+   ++  L+ GRQ+H  TI  
Sbjct: 323 TMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKA 382

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              S+  V N L+DMYAK     +AK++F  ++  + + + AMI  Y  +  L EAL LF
Sbjct: 383 NLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELF 442

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            EM       ++ TFA+++ A++ LASL  G+Q H+ +++ G     F  +AL+DMYAK 
Sbjct: 443 HEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC 502

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           GS+++A + F     R++V WN++IS  AQ+G+A+  L  F +M++ G QP+ V+ ++VL
Sbjct: 503 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVL 562

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           SACSH G +E+GL +FNSM   + ++P  EHYA +V +L RSG   EA++ + +MP EP 
Sbjct: 563 SACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPA 621

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
            I+W S++++CRI  N+E  K AA+     +  +D+  Y+ +SNI+A  G W  V +V+ 
Sbjct: 622 AIVWRSLLSACRIAGNVELGKYAAEMAISTDP-KDSGSYILLSNIFASKGMWADVKKVRD 680

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            M    V K    SW+E+ +KV+VF A D  H +  +I   ++ L+Q +K  GY PD + 
Sbjct: 681 RMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA-DIGSVLDILIQHIKGAGYVPDATA 739

Query: 665 ALHDE 669
            L ++
Sbjct: 740 LLMND 744



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/462 (32%), Positives = 256/462 (55%), Gaps = 10/462 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI  Y K+GN+  AR +F+ + ++TAV+WT +I GY++  +   + +LF  
Sbjct: 183 DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 242

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR +    PD    +++LS CS  +      Q+HA +++ G    + + N L+D Y K  
Sbjct: 243 MR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 301

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +   R++F +M  K+ +S+  +I+G+ +   + EA+KLF EM  LG+KP  F   + L+
Sbjct: 302 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 361

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +      +  GRQVHA+ +K N   + FV N L+D+Y+K + +++A+K+F  M E + +S
Sbjct: 362 SCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 421

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           YN MI  Y+  E+  E+L+LF E++      ++F F+ L++  +N   L+ G+Q H Q +
Sbjct: 422 YNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLV 481

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
                    V N+LVDMYAKCG  EEA+++F +      V W +MIS + Q G  EEAL 
Sbjct: 482 KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 541

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS----ALL 418
           +F EM +  I  +  TF ++L A +    +  G  L+ F    GF   +  G+     ++
Sbjct: 542 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG--LNHFNSMPGF--GIKPGTEHYACVV 597

Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            +  +SG L +A +  ++MP E   + W +L+SAC   G+ +
Sbjct: 598 SLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVE 639



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 273/528 (51%), Gaps = 3/528 (0%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P    FA LL      +       +H  II  G  S   + N L++   K   +D AR V
Sbjct: 47  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLAD 189
           F +MP K+ ++++++++ ++++G +EEA+ +FV++Q   G  P++F  A+ + A   L  
Sbjct: 107 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 166

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G Q+H FVV++ F ++V+V  +L+D YSK+  + EAR +F ++ E   V++  +I  
Sbjct: 167 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 226

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           Y    +   SL+LF +++ T     ++  S++LS  +    L+ G+QIH   +      +
Sbjct: 227 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 286

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V V N L+D Y KC R +  +++F  +   + + WT MIS Y+Q     EA+ LF EM R
Sbjct: 287 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 346

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                D     S+L +     +L  G+Q+H++ I++   S+ F  + L+DMYAKS  L D
Sbjct: 347 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 406

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F  M E+N++S+NA+I   +        L+ F +M     +P+  +  ++++A S+
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASN 466

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
              +  G Q+ N +  K  L        ++VD+  + G  +EA K+     +  D + W+
Sbjct: 467 LASLRHGQQFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWR-DVVCWN 524

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           S+I++   H   E A     ++ K     +   +VA+ +  + AG+ E
Sbjct: 525 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVE 572



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 248/534 (46%), Gaps = 56/534 (10%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           +Q    +P    FA  L   +    I   + +H  ++ +    + F+AN L+++ SK D 
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLS 283
           V  AR +F +MP  + ++++ M++ Y+     +E+L +F +LQ    +  ++F  ++++ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
                  ++ G Q+H   + +    +V V  SL+D Y+K G  EEA+ +F  LS  + V 
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WT +I+ Y + G    +L LF +M   N+  D+   +S+L A + L  L  GKQ+H++V+
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
           R G   +V   + L+D Y K   +K   + F +M  +NI+SW  +IS   QN      +K
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 339

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
            F +M + G++PD  +  SVL++C     +E+G Q  ++ T K  L   +     ++D+ 
Sbjct: 340 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ-VHAYTIKANLESDEFVKNGLIDMY 398

Query: 524 CRSGCFDEAEKLMAQMPFE----------------------------------PDEIMWS 549
            +S    +A+K+   M  +                                  P+E  ++
Sbjct: 399 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFA 458

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV--AMSNIYAVAGQWESVSQVKKAMR 607
           ++I +     +L   ++  +QL KM    D  P+V  A+ ++YA  G   S+ + +K   
Sbjct: 459 ALITAASNLASLRHGQQFHNQLVKMG--LDFCPFVTNALVDMYAKCG---SIEEARKMFN 513

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
               R V    W  + S           H Q  E    +  + +EM KEG +P+
Sbjct: 514 SSIWRDVVC--WNSMIST----------HAQHGEAEEAL-GMFREMMKEGIQPN 554



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 32/183 (17%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  QN +S N +I GY     L+ A ELF+ M  R             QK          
Sbjct: 414 MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL------------QK---------- 451

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
                     P+  TFA L++  S   +     Q H  ++K G +    + N+LVD Y K
Sbjct: 452 ----------PNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 501

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ AR++F     +D V +N++I+  A+ G  EEA+ +F EM   G +P+  TF A 
Sbjct: 502 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 561

Query: 181 LSA 183
           LSA
Sbjct: 562 LSA 564


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 375/735 (51%), Gaps = 72/735 (9%)

Query: 86  PDTANELIQVHADIIKFGY----NSILIICNSLVDSYCKIRCLDL--ARRVFKEMPQKDS 139
           P +  +  ++HA ++  G      S   + NSLV+ +     L L  A  +F  MP    
Sbjct: 9   PRSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTF 68

Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVGLADIALGRQVHA 198
           +   AL   F      E  + L+  M+  G     FTF         G A + L + +HA
Sbjct: 69  LFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHA 128

Query: 199 FVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV------------ 245
              +T     V  V+N ++ +Y +     +AR+ F ++P  D V++              
Sbjct: 129 ACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLD 188

Query: 246 -------------------MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
                              +I+ Y+   +  E++  F  +     +  +     LLS  A
Sbjct: 189 DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACA 248

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF------------- 333
              DL  GR +H        +   K+  +L+DMYAKCG    A E+F             
Sbjct: 249 QLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWN 308

Query: 334 ------ANLSHIST-------------VPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
                   L H+               V + ++I+ Y+  G L EAL LF++M R ++ A
Sbjct: 309 AMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRA 368

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           D  T  S+L A A L +L  G+ LH+ + +     +++ G+ALLDMY K G +++A   F
Sbjct: 369 DNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVF 428

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + M  R++ +W+A+I+  A NG  +A L+ F  M   G+QP+SV+ +++L+ACSH  L++
Sbjct: 429 QAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLD 488

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG  YF  M   + +RP  EHY  M+D+L RSG  DEA  L+  MP +P+ ++W+S++++
Sbjct: 489 EGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSA 548

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR+HK+   A+ AA+ L K+E   DA  YV + NIY  + QWE  SQ+++ M ERGV+K 
Sbjct: 549 CRVHKDANLARNAAEHLLKLEPDEDAV-YVQLYNIYIDSRQWEDASQIRRLMEERGVKKA 607

Query: 615 TAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIK 674
             YS + +  +VH F   D  HPQ  EI   +E + + +K  GY P TS    D DEE K
Sbjct: 608 AGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEK 667

Query: 675 VESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
             +L  HSE++AIAF LI+     P+ ++KNLR C DCH+AIKLIS+I  REI VRD SR
Sbjct: 668 EHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSR 727

Query: 735 FHHFKDGFCSCRDFW 749
           FHHF+DG CSC DFW
Sbjct: 728 FHHFRDGTCSCNDFW 742



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 211/460 (45%), Gaps = 58/460 (12%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++ V+   +ISG  K G L  A  L      R  +SWT LI GYS+  +  EA   F
Sbjct: 166 IPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCF 225

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSE----------------------PDTANELIQVHA- 97
             M +D G +PD VT   LLS C++                            LI ++A 
Sbjct: 226 NSMLSD-GIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAK 284

Query: 98  --DIIK-------FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITG 148
             DI +        G        N+++D YCK+  +D+AR +F +M  +D V+FN+LITG
Sbjct: 285 CGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITG 344

Query: 149 FAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
           +   G   EA+ LF++M+    +  +FT  + L+A   L  +  GR +HA + +     +
Sbjct: 345 YIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVD 404

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +++  ALLD+Y K   V EA  +F  M   D  +++ MI   A+N   K +L+ F  ++ 
Sbjct: 405 IYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKV 464

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKCGRFE 327
             F  +   +  +L+  ++   L  GR    +  +   I   ++    ++D+  + G  +
Sbjct: 465 DGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLD 524

Query: 328 EAKEIFANLS-HISTVPWTAMISA-YVQK-GNL-----EEALNL-------FIEMCRANI 372
           EA ++   +    + V W +++SA  V K  NL     E  L L       ++++    I
Sbjct: 525 EAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYI 584

Query: 373 SADQATFASILR---------ASAELASLSLGKQLHSFVI 403
            + Q   AS +R          +A  +S+++  Q+H F++
Sbjct: 585 DSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIV 624


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/702 (32%), Positives = 385/702 (54%), Gaps = 41/702 (5%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMP 135
           +LL  C   +T  E+ Q+H+  IK G +S  +    ++   C     D+  AR+VF E+P
Sbjct: 40  SLLETC---NTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP 96

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q     +N +I G+++   +E  + L+  M     KP  FTF   L        +  G+ 
Sbjct: 97  QPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKV 156

Query: 196 VHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           +    V   F++ N+FV    + L+S    V  ARK+F      + V++NV+++ Y   +
Sbjct: 157 LLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFK 216

Query: 255 QYKESLKLFRELQ--FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVK 311
           +Y+ES +LF E++        +      +LS  +   DL  G+ I+ + I    +   + 
Sbjct: 217 RYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLI 276

Query: 312 VANSLVDMYAKCGRFEEAKEIF------------------ANLSHIST------------ 341
           + N+L+DM+A CG  + A+ +F                  AN   I              
Sbjct: 277 LENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD 336

Query: 342 -VPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V WTAMI  Y++    +E L LF +M  +N+  D+ T  SIL A A L +L LG+   +
Sbjct: 337 YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKT 396

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           ++ ++   ++ F G+AL+DMY K G+++ A + F EM +++  +W A+I   A NG  + 
Sbjct: 397 YIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEE 456

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  F  M+++   PD ++ + V+ AC+H GL+ +G  +F++M  ++ ++P   HY  MV
Sbjct: 457 ALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMV 516

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L R+G   EA +++  MP +P+ I+W S++ +CR+HKN++ A+ AA+++ ++E   + 
Sbjct: 517 DLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEP-ENG 575

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           A YV + NIYA   +W+++  V+K M ERG++K+   S +E+   V+ F A D+ HPQ+ 
Sbjct: 576 AVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSK 635

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI  K+EN+ Q++   GY PDTS    D  EE K  +L  HSE+LAIA+ALI++ +G  I
Sbjct: 636 EIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTI 695

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
            ++KNLR C DCH    ++SK+  RE+ VRD +RFHHF+ G 
Sbjct: 696 RIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 248/513 (48%), Gaps = 48/513 (9%)

Query: 18  KSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           +SG++  AR++F+ +   +   W  +I GYS+ N       L+  M       PD  TF 
Sbjct: 81  ESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVH-NIKPDGFTFP 139

Query: 78  TLLSGCSEPDTA---NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
            LL G ++ D A    +++  HA I  F  +S L +    +  +     ++ AR++F   
Sbjct: 140 FLLKGFTK-DMALKYGKVLLNHAVIHGF-LDSNLFVQKGFIHLFSLCGLVNYARKIFDMG 197

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL--GFKPSDFTFAAALSAGVGLADIAL 192
              + V++N +++G+ +    EE+ +LF+EM+       P+  T    LSA   L D+  
Sbjct: 198 DGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVG 257

Query: 193 GRQVHAFVVKTNFVE-NVFVANALLDLYSK------------------------------ 221
           G+ ++   +K   VE N+ + NAL+D+++                               
Sbjct: 258 GKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFA 317

Query: 222 HDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
           + C ++ ARK F +MPE D VS+  MI  Y    ++KE L LFR++Q +     +F   +
Sbjct: 318 NTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVS 377

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L+  A+   L++G    T        ++  + N+L+DMY KCG  E+AK+IF  +    
Sbjct: 378 ILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKD 437

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
              WTAMI      G+ EEAL +F  M  A+++ D+ T+  ++ A   +  ++ GK   S
Sbjct: 438 KFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFS 497

Query: 401 -FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDA 458
              ++ G   N+     ++D+  ++G LK+A++    MP + N + W +L+ AC  + + 
Sbjct: 498 NMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNV 557

Query: 459 QATLKSFEDMVQSGYQPDS----VSLLSVLSAC 487
           Q    +  ++++   +P++    V L ++ +AC
Sbjct: 558 QLAEMAANEILE--LEPENGAVYVLLCNIYAAC 588



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 220/500 (44%), Gaps = 69/500 (13%)

Query: 20  GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS-DPDYVTFAT 78
           G +  AR++F+       V+W +++ GY++  ++ E+ +LF++M        P+ VT   
Sbjct: 185 GLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVL 244

Query: 79  LLSGCS---------------------EPDTA--NELIQVHA-----DIIKFGYNSI--- 107
           +LS CS                     EP+    N LI + A     D  +  ++ +   
Sbjct: 245 MLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTR 304

Query: 108 -LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
            +I   S+V  +     +DLAR+ F +MP++D VS+ A+I G+ +    +E + LF +MQ
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
               KP +FT  + L+A   L  + LG     ++ K     + F+ NAL+D+Y K   V 
Sbjct: 365 MSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVE 424

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           +A+K+F EM + D  ++  MI   A N   +E+L +F  +        +  +  ++    
Sbjct: 425 KAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACT 484

Query: 287 NKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPW 344
           +   +  G+   +   V   I   +     +VD+  + G  +EA E+  N+    +++ W
Sbjct: 485 HVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVW 544

Query: 345 TAMISAYVQKGNL---EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
            +++ A     N+   E A N  +E+   N  A      +I  A  +       K LH+ 
Sbjct: 545 GSLLGACRVHKNVQLAEMAANEILELEPEN-GAVYVLLCNIYAACKKW------KNLHN- 596

Query: 402 VIRSGFMS---NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
            +R   M        G +L++M   +G + + +   K  P               Q+ + 
Sbjct: 597 -VRKMMMERGIKKIPGCSLMEM---NGIVYEFVAGDKSHP---------------QSKEI 637

Query: 459 QATLKSF-EDMVQSGYQPDS 477
            A L++  +D+  +GY PD+
Sbjct: 638 YAKLENMKQDLSNAGYSPDT 657



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ +S   +++G+  +  +  AR+ F+ M +R  VSWT +I GY + N+F+E   LF
Sbjct: 301 MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDT--ANELIQVHADIIKFGYNSILIICNSLVDSY 118
            DM+      PD  T  ++L+ C+        E  + + D  K   ++   I N+L+D Y
Sbjct: 361 RDMQMS-NVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDT--FIGNALIDMY 417

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   ++ A+++F EM +KD  ++ A+I G A  G  EEA+ +F  M      P + T+ 
Sbjct: 418 FKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYI 477

Query: 179 AALSAGVGLADIALGRQVHA-FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
             + A   +  +A G+   +   V+     N+     ++DL  +   + EA ++   MP
Sbjct: 478 GVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMP 536


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/562 (37%), Positives = 340/562 (60%), Gaps = 9/562 (1%)

Query: 195 QVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           Q+H   +++  F  + + A+ALL +Y      ++AR+ F E+P+ + V    M + Y  N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLL--SVVANKLDLQIGRQIHTQTIVTTAISEVK 311
                SL+LFR +  +         + L+  S  A   D  +   +H             
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 312 VANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           V N+++D YAK G    E A+++F  +     V W +MI+ Y Q G   EA+ L+ +M  
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292

Query: 370 --ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  +    +++L A A   ++  GK++H+ V+R G   NV+ G++++DMY+K G +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           + A + F+++ E+NI+SW+A+I+    +G  Q  L+ F +M +SG +P+ ++ +SVL+AC
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++EG  ++N+M Q++ +    EHY  MVD+L R+GC DEA  L+ +M  +PD  +
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++++CRIHKN+E A+ +  +LF+++   ++  YV +SNIYA A  W+ V +++  ++
Sbjct: 473 WGALLSACRIHKNVELAEMSVKRLFELDA-SNSGYYVLLSNIYAEARMWKDVERIRLLVK 531

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            R + K   YS  ELK K+++F   D+ HPQ  EI   +E L++ M++ GY P+T   LH
Sbjct: 532 TRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLH 591

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D DEE K  +L+ HSE+LA+AFAL+N+   S I ++KNLR C+DCH A+K I+KIT REI
Sbjct: 592 DLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREI 651

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            +RD  RFHHFKDG CSCRD+W
Sbjct: 652 IIRDLQRFHHFKDGLCSCRDYW 673



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 8/360 (2%)

Query: 8   STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTD 66
           S + L+  Y        AR  F+ + D   V  T +  GY + N    + +LF  M  +D
Sbjct: 131 SASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASD 190

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK--IRCL 124
             S  D        S  +          +HA I K G+     + N+++DSY K   R L
Sbjct: 191 SASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDL 250

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALS 182
           ++AR+VF  M ++D VS+N++I  +A+ G++ EAI L+ +M ++G   K +    +A L 
Sbjct: 251 EVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLL 309

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A      I  G+++H  VV+    ENV+V  +++D+YSK   V  A + F ++ E + +S
Sbjct: 310 ACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILS 369

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ MIT Y  + + +E+L++F E++ +    +   F ++L+  ++   L  GR  +    
Sbjct: 370 WSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMK 429

Query: 303 VTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
               I + V+    +VD+  + G  +EA  +   +        W A++SA     N+E A
Sbjct: 430 QEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELA 489



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)

Query: 4   QNTVSTNMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +N    N ++  Y K G  +L  AR++F++M +R  VSW  +I  Y+Q     EA  L+ 
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 288

Query: 62  DM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M    GG   + V  + +L  C+         ++H  +++ G    + +  S+VD Y K
Sbjct: 289 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 348

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +++A R F+++ +K+ +S++A+ITG+   G  +EA+++F EM+  G +P+  TF + 
Sbjct: 349 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 408

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
           L+A      +  GR  +  + +   +E  V     ++DL  +  C+ EA  L  EM
Sbjct: 409 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 464



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      ++  Y K G +  A   F  + ++  +SW+ +I GY    + +EA ++F +M
Sbjct: 334 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 393

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  G   P+Y+TF ++L+ CS     +E     +A   +FG  + +     +VD   +  
Sbjct: 394 KRSG-LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAG 452

Query: 123 CLDLARRVFKEMPQK-DSVSFNALIT 147
           CLD A  + KEM  K D+  + AL++
Sbjct: 453 CLDEAYSLIKEMKVKPDAAIWGALLS 478


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/632 (34%), Positives = 352/632 (55%), Gaps = 16/632 (2%)

Query: 128 RRVFKEMPQKDSVSFNALITGFAK---EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           RR  + +        + L++ F++   +G    A+ L  ++   G +    +    +   
Sbjct: 17  RRSRRRLHSGSHSHPHPLVSIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLC 76

Query: 185 VGLADIALGRQVHAFV------VKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
           V    +  GR +H  V             ++FV+N+L+ +Y+K   + +A +LFG MP+ 
Sbjct: 77  VRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQR 136

Query: 239 DGVSYNVMITCYA-WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           + VS+  ++   A    + KE+L+   E++      + + FS++L        L     +
Sbjct: 137 NVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLA---AM 193

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   I     S+V V +SL+D Y K G  +  + +F  +     V W ++I+ + Q G+ 
Sbjct: 194 HADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDG 253

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
             A+ LF+ M  +   A+Q T  S+LRA   +  L +G+Q+H+ V++  +  ++   +AL
Sbjct: 254 VGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNAL 311

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           LDMY K G L DA   F  M +R+++SW+ +IS  AQNG +   LK F+ M   G  P++
Sbjct: 312 LDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNN 371

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++++ VL ACSH GL+E+G  YF SM + + ++P++EH   MVD+L R+G  DEA K + 
Sbjct: 372 ITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIG 431

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +M FEPD ++W +++ +CR+HKN   A  AA ++ K+E   D    + +SNIYA   QW 
Sbjct: 432 EMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEP-EDQGARILLSNIYADLRQWS 490

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
           +  +  K MR++GV+K    SW+EL   VHVF A +  HP ++ I +++  L++  K  G
Sbjct: 491 NAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLG 550

Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
           Y P T   L D   E K + LKYHSE+LAIAF  +N+ EG P+ +MKNLR C DCHA  K
Sbjct: 551 YVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAK 610

Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           L+SK  G+ I +RD  RFHHF+ G CSC D+W
Sbjct: 611 LVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 9/345 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQ-KNQFREAFKLFVDMRTDG 67
           +N L+S Y K G L  A ELF  M  R  VSWT ++   +    + +EA +  V+MR DG
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            +   Y TF+++L  C  P     L  +HADIIK G +S + + +SL+D+Y K+  LD  
Sbjct: 170 VAANSY-TFSSVLGACGTPGV---LAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSG 225

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF EM   D V +N++I GFA+ G    A++LF+ M+  GF  +  T  + L A  G+
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGM 285

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             + +GRQVHA V+K +   ++ + NALLD+Y K  C+++A  LF  M + D +S++ MI
Sbjct: 286 VMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMI 343

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  A N +  E+LK+F  ++      +      +L   ++   ++ G            I
Sbjct: 344 SGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGI 403

Query: 308 S-EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             E +  N +VD+  + G+ +EA +    +     +V W  ++ A
Sbjct: 404 QPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGA 448



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 198/428 (46%), Gaps = 29/428 (6%)

Query: 53  FREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI------IKFGYNS 106
           F  A  L  D+    G   D V+   L+  C    T  +   +H  +           + 
Sbjct: 47  FTAALALLPDIAA-AGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHG 105

Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEM 165
            L + NSLV  Y K   LD A  +F  MPQ++ VS+  ++   A   G  +EA++  VEM
Sbjct: 106 SLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEM 165

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
           +  G   + +TF++ L A      +A    +HA ++K     +VFV ++L+D Y K   +
Sbjct: 166 RRDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDL 222

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
              R +F EM   D V +N +I  +A +     +++LF  ++ + F  +Q   +++L   
Sbjct: 223 DSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRAC 282

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
              + L++GRQ+H    V     ++ + N+L+DMY KCG   +A  +F+ +     + W+
Sbjct: 283 TGMVMLEVGRQVHAH--VLKYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWS 340

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            MIS   Q G   EAL +F  M     + +  T   +L A +    +  G   H F  RS
Sbjct: 341 TMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDG--WHYF--RS 396

Query: 406 GFMSNVFS-------GSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
             M  +F         + ++D+  ++G L +A++   EM  E + V W  L+ AC  +  
Sbjct: 397 --MDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMH-- 452

Query: 458 AQATLKSF 465
             ATL S+
Sbjct: 453 KNATLASY 460



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ +  N L+  Y K G L  A  LF+ M DR  +SW+ +I G +Q  +  EA K+F  
Sbjct: 302 DRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDL 361

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M+ +G + P+ +T   +L  CS      +       + K FG       CN +VD   + 
Sbjct: 362 MKAEGPT-PNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRA 420

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALI 146
             LD A +   EM  + DSV +  L+
Sbjct: 421 GKLDEAMKFIGEMKFEPDSVIWRTLL 446


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 348/613 (56%), Gaps = 11/613 (1%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           N LI    K G  ++AI L     +    P+  TF   + +      ++ G  VH  +V 
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCCEPN----PTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
           + F ++ F+A  L+++Y +   +  ARK+F E  E     +N +    A     KE L L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDL 166

Query: 263 FRELQFTRFDRSQFPFSTLL-SVVANKLD---LQIGRQIHTQTIVTTAISEVKVANSLVD 318
           + ++ +      +F ++ +L + V ++L    LQ G++IH   +     + + V  +L+D
Sbjct: 167 YVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLD 226

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRANISA-DQ 376
           +YAK G    A  +F  +   + V W+AMI+ + +     +AL LF + M  A+ S  + 
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNS 286

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
            T  ++L+A A LA+L  GK +H +++R G  S +   +AL+ MY + G +    + F  
Sbjct: 287 VTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDN 346

Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
           M  R++VSWN+LIS    +G  +  ++ FE+M+  G  P  +S ++VL ACSH GL+EEG
Sbjct: 347 MKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEG 406

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
              F SM  KY++ P  EHYA MVD+L R+   DEA KL+  M FEP   +W S++ SCR
Sbjct: 407 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCR 466

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
           IH N+E A++A+  LF++E  R+A  YV +++IYA A  W     V K +  RG++K+  
Sbjct: 467 IHCNVELAERASTLLFELEP-RNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPG 525

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            SW+E+K KV+ F + DE +PQ  EI   +  L  EMK +GY P T+  L+D DEE K  
Sbjct: 526 CSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKER 585

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
            +  HSE+LA+AF LINT +G  I + KNLR C DCHA  K ISK   REI VRD +RFH
Sbjct: 586 IVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFH 645

Query: 737 HFKDGFCSCRDFW 749
           HFKDG CSC D+W
Sbjct: 646 HFKDGVCSCGDYW 658



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 192/391 (49%), Gaps = 8/391 (2%)

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           +P   TF  L+  C++ ++ ++ + VH  ++  G++    +   L++ Y ++  +D AR+
Sbjct: 75  NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARK 134

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV---- 185
           VF E  ++    +NAL    A  G  +E + L+V+M  +G     FT+   L A V    
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL 194

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            ++ +  G+++HA +++  +  N+ V   LLD+Y+K   V  A  +F  MP  + VS++ 
Sbjct: 195 SVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           MI C+A NE   ++L+LF+ +     D   +      +L   A    L+ G+ IH   + 
Sbjct: 255 MIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILR 314

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
               S + V N+L+ MY +CG     + +F N+ +   V W ++IS Y   G  ++A+ +
Sbjct: 315 RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYA 422
           F  M     S    +F ++L A +    +  GK L  S + +      +   + ++D+  
Sbjct: 375 FENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           ++  L +AI+  ++M  E     W +L+ +C
Sbjct: 435 RANRLDEAIKLIEDMHFEPGPTVWGSLLGSC 465



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 174/367 (47%), Gaps = 11/367 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+      LI+ Y + G++  AR++F+   +RT   W  L    +     +E   L+V 
Sbjct: 110 DQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQ 169

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ----VHADIIKFGYNSILIICNSLVDSY 118
           M    G   D  T+  +L  C   + +   +Q    +HA I++ GY + + +  +L+D Y
Sbjct: 170 MNWI-GIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVY 228

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFT 176
            K   +  A  VF  MP K+ VS++A+I  FAK  +  +A++LF  M        P+  T
Sbjct: 229 AKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVT 288

Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
               L A  GLA +  G+ +H ++++      + V NAL+ +Y +   ++  +++F  M 
Sbjct: 289 MVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMK 348

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
             D VS+N +I+ Y  +   K+++++F  +       S   F T+L   ++   ++ G+ 
Sbjct: 349 NRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKI 408

Query: 297 IHTQTIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP--WTAMISAYVQ 353
           +    +    I   ++    +VD+  +  R +EA ++  ++ H    P  W +++ +   
Sbjct: 409 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM-HFEPGPTVWGSLLGSCRI 467

Query: 354 KGNLEEA 360
             N+E A
Sbjct: 468 HCNVELA 474


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/579 (37%), Positives = 326/579 (56%), Gaps = 2/579 (0%)

Query: 172 PSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           PS  TF  AL +   L   +  G Q+HA  +K     N  V  +LL LY++   +  A++
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F EMP    VS+  +IT Y      +E++ + R           F    +L+  A   D
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L  G  +            V VA + VD+Y KCG   +A+E+F  +     V W AM+  
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y   G+  EAL+LF+ M    +  D    A  L A   L +L LG+Q    V    F+ N
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
              G+AL+DMYAK GS  +A   F++M +++I+ WNA+I      G  +        M +
Sbjct: 308 PVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEK 367

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           SG + +  + + +L +C+H GLI++G +YF++MT+ Y + P+ EHY  +VD+L R+G   
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQ 427

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA +L+  MP   + ++  +++  C+IH+N E A+    QL ++E   ++  YV +SNIY
Sbjct: 428 EAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPW-NSGNYVMLSNIY 486

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           +  G+WE  ++++  M+E+GV KV A SWVE + KVH F   D+ HP +++I +K++ L 
Sbjct: 487 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 546

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
            EMK  GY+P T   + D ++E K  +L +HSE+LAIAF L+ T  G  I V KNLR C+
Sbjct: 547 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCS 606

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH AIKLIS+IT REI VRD++RFH F+DG CSC D+W
Sbjct: 607 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 183/395 (46%), Gaps = 7/395 (1%)

Query: 70  DPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P ++TF   L   S    P  A E  Q+HA  +K   ++   +  SL+  Y +   L  
Sbjct: 67  NPSHLTFPIALKSASRLPHPLRAGE--QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHR 124

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+RVF EMP   +VS+ ALIT +   G   EA+ +       G +P  FT    L+A   
Sbjct: 125 AQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 184

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +AD+A G  V     +    ++VFVA A +DLY K   + +AR++F +M + D V++  M
Sbjct: 185 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 244

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N   +E+L LF  +Q        +  +  LS       L +GRQ          
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 304

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +    +  +L+DMYAKCG   EA  +F  +     + W AMI      G+ + A  L  +
Sbjct: 305 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 364

Query: 367 MCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M ++ +  +  TF  +L +      +  G++  H+          +     ++D+ +++G
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 424

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            L++A Q   +MP   N V   AL+  C  + +A+
Sbjct: 425 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAE 459



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 15/366 (4%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y + G L  A+ +F+ M   + VSWT LI  Y      REA  +  +   + G  P
Sbjct: 112 LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRP 170

Query: 72  DYVTFATLLSGCSE-PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T   +L+ C+   D A  E +   A+  + G    + +  + VD Y K   +  AR 
Sbjct: 171 DSFTAVRVLTACARVADLATGETVWRAAE--QEGIAQSVFVATAAVDLYVKCGEMAKARE 228

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KD+V++ A++ G+A  G   EA+ LF+ MQ  G +P  +  A ALSA   L  
Sbjct: 229 VFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGA 288

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ    V    F++N  +  AL+D+Y+K     EA  +F +M + D + +N MI  
Sbjct: 289 LDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 348

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
                  K +  L  +++ +    +   F  LL    +   +Q GR+  H  T +     
Sbjct: 349 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG-----NLEEALNL 363
            ++    +VD+ ++ G  +EA ++  ++     +P  A+I   +  G     N E A ++
Sbjct: 409 RIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGGCKIHRNAELAEHV 464

Query: 364 FIEMCR 369
             ++ R
Sbjct: 465 LTQLIR 470


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/579 (37%), Positives = 326/579 (56%), Gaps = 2/579 (0%)

Query: 172 PSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           PS  TF  AL +   L   +  G Q+HA  +K     N  V  +LL LY++   +  A++
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F EMP    VS+  +IT Y      +E++ + R           F    +L+  A   D
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L  G  +            V VA + VD+Y KCG   +A+E+F  +     V W AM+  
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y   G+  EAL+LF+ M    +  D    A  L A   L +L LG+Q    V    F+ N
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 354

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
              G+AL+DMYAK GS  +A   F++M +++I+ WNA+I      G  +        M +
Sbjct: 355 PVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEK 414

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           SG + +  + + +L +C+H GLI++G +YF++MT+ Y + P+ EHY  +VD+L R+G   
Sbjct: 415 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQ 474

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA +L+  MP   + ++  +++  C+IH+N E A+    QL ++E   ++  YV +SNIY
Sbjct: 475 EAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPW-NSGNYVMLSNIY 533

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           +  G+WE  ++++  M+E+GV KV A SWVE + KVH F   D+ HP +++I +K++ L 
Sbjct: 534 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 593

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
            EMK  GY+P T   + D ++E K  +L +HSE+LAIAF L+ T  G  I V KNLR C+
Sbjct: 594 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCS 653

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH AIKLIS+IT REI VRD++RFH F+DG CSC D+W
Sbjct: 654 DCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 183/395 (46%), Gaps = 7/395 (1%)

Query: 70  DPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P ++TF   L   S    P  A E  Q+HA  +K   ++   +  SL+  Y +   L  
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGE--QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHR 171

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+RVF EMP   +VS+ ALIT +   G   EA+ +       G +P  FT    L+A   
Sbjct: 172 AQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 231

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +AD+A G  V     +    ++VFVA A +DLY K   + +AR++F +M + D V++  M
Sbjct: 232 VADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAM 291

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N   +E+L LF  +Q        +  +  LS       L +GRQ          
Sbjct: 292 VGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 351

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +    +  +L+DMYAKCG   EA  +F  +     + W AMI      G+ + A  L  +
Sbjct: 352 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 411

Query: 367 MCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M ++ +  +  TF  +L +      +  G++  H+          +     ++D+ +++G
Sbjct: 412 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 471

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
            L++A Q   +MP   N V   AL+  C  + +A+
Sbjct: 472 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAE 506



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 15/366 (4%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L++ Y + G L  A+ +F+ M   + VSWT LI  Y      REA  +  +   + G  P
Sbjct: 159 LLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRP 217

Query: 72  DYVTFATLLSGCSE-PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T   +L+ C+   D A  E +   A+  + G    + +  + VD Y K   +  AR 
Sbjct: 218 DSFTAVRVLTACARVADLATGETVWRAAE--QEGIAQSVFVATAAVDLYVKCGEMAKARE 275

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KD+V++ A++ G+A  G   EA+ LF+ MQ  G +P  +  A ALSA   L  
Sbjct: 276 VFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGA 335

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ    V    F++N  +  AL+D+Y+K     EA  +F +M + D + +N MI  
Sbjct: 336 LDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILG 395

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
                  K +  L  +++ +    +   F  LL    +   +Q GR+  H  T +     
Sbjct: 396 LGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 455

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG-----NLEEALNL 363
            ++    +VD+ ++ G  +EA ++  ++     +P  A+I   +  G     N E A ++
Sbjct: 456 RIEHYGCIVDLLSRAGLLQEAHQLIDDMP----MPANAVILGALLGGCKIHRNAELAEHV 511

Query: 364 FIEMCR 369
             ++ R
Sbjct: 512 LTQLIR 517


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/541 (37%), Positives = 331/541 (61%), Gaps = 6/541 (1%)

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +F+ N L+++Y K + + +A +LF +MP+ + +S+  MI+ Y+  + ++++L+L   +  
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                + + +S++L       D+   R +H   I     S+V V ++L+D++AK G  E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  +     + W ++I  + Q    + AL LF  M RA   A+QAT  S+LRA   
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           LA L LG Q H  +++  +  ++   +AL+DMY K GSL+DA++ F +M ER++++W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           IS  AQNG +Q  LK FE M  SG +P+ ++++ VL ACSH GL+E+G  YF SM + Y 
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P +EHY  M+D+L ++G  D+A KL+ +M  EPD + W +++ +CR+ +N+  A+ AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            ++  ++   DA  Y  +SNIYA + +W+SV +++  MR+RG++K    SW+E+  ++H 
Sbjct: 451 KKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D  HPQ  E+ +K+  L+  +   GY P+T+  L D + E   +SL++HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F L+  P    I + KNLR C DCH   KL SK+  R I +RD  R+HHF+DG CSC D+
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629

Query: 749 W 749
           W
Sbjct: 630 W 630



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 197/390 (50%), Gaps = 21/390 (5%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T++ L+  C      +E   +   +   G+  ++ + N L++ Y K   L+ A ++F
Sbjct: 60  DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MPQ++ +S+  +I+ ++K  ++++A++L V M     +P+ +T+++ L +  G++D+ 
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             R +H  ++K     +VFV +AL+D+++K     +A  +F EM   D + +N +I  +A
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N +   +L+LF+ ++   F   Q   +++L        L++G Q H    +     ++ 
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH--IVKYDQDLI 294

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+LVDMY KCG  E+A  +F  +     + W+ MIS   Q G  +EAL LF  M  + 
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354

Query: 372 ISADQATFASILRASAELASLSLG-------KQLHSF-VIRSGFMSNVFSGSALLDMYAK 423
              +  T   +L A +    L  G       K+L+    +R  +         ++D+  K
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY-------GCMIDLLGK 407

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +G L DA++   EM  E + V+W  L+ AC
Sbjct: 408 AGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 37/460 (8%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N+LI+ YVK   L  A +LF+ M  R  +SWT +I  YS+    ++A +L V M  D  
Sbjct: 99  VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN- 157

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T++++L  C   +  +++  +H  IIK G  S + + ++L+D + K+   + A 
Sbjct: 158 VRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF EM   D++ +N++I GFA+   ++ A++LF  M+  GF     T  + L A  GLA
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LG Q H  +VK  + +++ + NAL+D+Y K   + +A ++F +M E D ++++ MI+
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             A N   +E+LKLF  ++ +    +      +L   ++   L+ G            I 
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 309 EVKVA-NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALNL 363
            V+     ++D+  K G+ ++A ++   +      V W  ++ A   + N+   E A   
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452

Query: 364 FIEM---------CRANISADQATFASI-----------LRASAELASLSLGKQLHSFVI 403
            I +           +NI A+   + S+           ++     + + + KQ+H+F+I
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                    S   ++++  K   L   +     +PE N V
Sbjct: 513 GDN------SHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 151/355 (42%), Gaps = 51/355 (14%)

Query: 340 STVPWTAMISAYVQ---KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
           S+   T ++S + +   + +L  A+     +    + AD AT++ +++      ++  G 
Sbjct: 22  SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN 81

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            +   +  +G    +F  + L++MY K   L DA Q F +MP+RN++SW  +ISA ++  
Sbjct: 82  LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQ----YFNSMT 504
             Q  L+    M++   +P+  +  SVL +C+        HCG+I+EGL+      +++ 
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALI 201

Query: 505 QKYKLRPKKEHYASMVDILC------------------RSGCFDEAEKLMAQMPFEPDEI 546
             +    + E   S+ D +                   RS    E  K M +  F  ++ 
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
             +SV+ +C     LE   +A   + K ++  D     A+ ++Y   G  E   +V   M
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQM 319

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           +ER V      +W  + S +             N   ++   L + MK  G KP+
Sbjct: 320 KERDV-----ITWSTMISGL-----------AQNGYSQEALKLFERMKSSGTKPN 358



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 42/312 (13%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N L+  Y K G+L  A  +FN M +R  ++W+ +I G +Q    +EA KLF  
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M++  G+ P+Y+T   +L  CS      +       + K +G + +      ++D   K 
Sbjct: 350 MKS-SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD---FTF 177
             LD A ++  EM  + D+V++  L+ G  +   N   +  +   + +   P D   +T 
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRN-MVLAEYAAKKVIALDPEDAGTYTL 466

Query: 178 AAALSA------------------GV----GLADIALGRQVHAFVVKTNFVENVFVANAL 215
            + + A                  G+    G + I + +Q+HAF++  N    +      
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI------ 520

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           +++  K + ++      G +PE + V  ++        EQ ++SL+   E     F    
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLE------GEQMEDSLRHHSEKLALAFGLMT 574

Query: 276 FPFSTLLSVVAN 287
            P   ++ +  N
Sbjct: 575 LPIEKVIRIRKN 586


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/542 (39%), Positives = 329/542 (60%), Gaps = 1/542 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
            +  H  +++ +   +V + N L++ YSK   V  AR++F  M E   VS+N MI  Y  
Sbjct: 72  AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 131

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N    E+L +F E++   F  S+F  S++LS      D    +++H  ++ T     + V
Sbjct: 132 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 191

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +L+D+YAKCG  ++A ++F ++   S+V W++M++ YVQ  N EEAL L+    R ++
Sbjct: 192 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 251

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             +Q T +S++ A + LA+L  GKQ+H+ + +SGF SNVF  S+ +DMYAK GSL+++  
Sbjct: 252 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 311

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F E+ E+N+  WN +IS  A++   +  +  FE M Q G  P+ V+  S+LS C H GL
Sbjct: 312 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 371

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           +EEG ++F  M   Y L P   HY+ MVDIL R+G   EA +L+  +PF+P   +W S++
Sbjct: 372 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 431

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            SCR++KNLE A+ AA++LF++E   +A  +V +SNIYA   QWE +++ +K +R+  V+
Sbjct: 432 ASCRVYKNLELAEVAAEKLFELEP-ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 490

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           KV   SW+++K KVH F+  +  HP+  EI   ++NL+ + +K GYKP     LHD +  
Sbjct: 491 KVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIG 550

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            K E L  HSE+LA+ F L+  PE SP+ +MKNLR C DCH  +K  S  T R I VRD 
Sbjct: 551 KKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDV 610

Query: 733 SR 734
           +R
Sbjct: 611 NR 612



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 200/376 (53%), Gaps = 2/376 (0%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           +L  C+      E    H  II+      + + N L+++Y K   ++LAR+VF  M ++ 
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
            VS+N +I  + +  +  EA+ +F+EM++ GFK S+FT ++ LSA     D    +++H 
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
             VKT    N++V  ALLDLY+K   + +A ++F  M +   V+++ M+  Y  N+ Y+E
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L L+R  Q    +++QF  S+++   +N   L  G+Q+H     +   S V VA+S VD
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           MYAKCG   E+  IF+ +   +   W  +IS + +    +E + LF +M +  +  ++ T
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358

Query: 379 FASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           F+S+L        +  G++    +  + G   NV   S ++D+  ++G L +A +  K +
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418

Query: 438 PERNIVS-WNALISAC 452
           P     S W +L+++C
Sbjct: 419 PFDPTASIWGSLLASC 434



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 194/353 (54%), Gaps = 3/353 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N+LI+ Y K G +  AR++F+ M++R+ VSW  +IG Y++     EA  +F++MR +G  
Sbjct: 92  NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 151

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             ++ T +++LS C     A E  ++H   +K   +  L +  +L+D Y K   +  A +
Sbjct: 152 FSEF-TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 210

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF+ M  K SV++++++ G+ +    EEA+ L+   Q +  + + FT ++ + A   LA 
Sbjct: 211 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 270

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           +  G+Q+HA + K+ F  NVFVA++ +D+Y+K   + E+  +F E+ E +   +N +I+ 
Sbjct: 271 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 330

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A + + KE + LF ++Q      ++  FS+LLSV  +   ++ GR+       T  +S 
Sbjct: 331 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 390

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
             V  S +VD+  + G   EA E+  ++    T   W +++++     NLE A
Sbjct: 391 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 443



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 158/320 (49%), Gaps = 15/320 (4%)

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +L + A    +   +  H + I      +V + N L++ Y+KCG  E A+++F  +   S
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
            V W  MI  Y +     EAL++F+EM        + T +S+L A          K+LH 
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
             +++    N++ G+ALLD+YAK G +KDA+Q F+ M +++ V+W+++++   QN + + 
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  +    +   + +  +L SV+ ACS+   + EG Q  +++  K          +S V
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAV 297

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ--LFKMEKLR 578
           D+  + G   E+  + +++  E +  +W+++I+         FAK A  +  +   EK++
Sbjct: 298 DMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISG--------FAKHARPKEVMILFEKMQ 348

Query: 579 DAAPY---VAMSNIYAVAGQ 595
               +   V  S++ +V G 
Sbjct: 349 QDGMHPNEVTFSSLLSVCGH 368



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 69/253 (27%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           Y K G+L  +  +F+ + ++    W  +I G+++  + +E   LF  M+ D G  P+ VT
Sbjct: 300 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVT 358

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F++LLS C            H  +++ G                  R   L R  +   P
Sbjct: 359 FSSLLSVCG-----------HTGLVEEGR-----------------RFFKLMRTTYGLSP 390

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
             + V ++ ++    + GL  EA +L   ++ + F P+   + + L++     ++ L   
Sbjct: 391 --NVVHYSCMVDILGRAGLLSEAYEL---IKSIPFDPTASIWGSLLASCRVYKNLELAE- 444

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
                                         V A KLF   PE  G ++ ++   YA N+Q
Sbjct: 445 ------------------------------VAAEKLFELEPENAG-NHVLLSNIYAANKQ 473

Query: 256 YKE---SLKLFRE 265
           ++E   S KL R+
Sbjct: 474 WEEIAKSRKLLRD 486


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/738 (31%), Positives = 393/738 (53%), Gaps = 65/738 (8%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N  S N +ISG+  SG +  A +LF  M +R +VSW  ++ GY    +     K      
Sbjct: 69  NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIK------ 122

Query: 65  TDGGSDPDYVTFATLLSGCSEP-----DTANEL----IQVHADIIKFGY-------NSIL 108
                   Y+  A  L G +E      DT  E     + +    + F         N  L
Sbjct: 123 --ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSL 180

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
              NS++  Y K   +  A  +F +MP++D+VS+N +I+  ++ G   E +  F+EM + 
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           GF+P+  T+A+ LSA   + D+  G  +HA +V+     +V+    L+D+Y+K   +  A
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 300

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK 288
           R++F  + E + VS+  +I   A     +E+L LF +++       QF  +T+L V  ++
Sbjct: 301 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360

Query: 289 LDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC------------------------- 323
            D+ IG Q+H  TI     S V VAN+LV MYAKC                         
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMI 420

Query: 324 ------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
                 G  E+A+E F  +   + + W +M++ Y+Q+G  EE L ++I+M R  +  D  
Sbjct: 421 TAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWI 480

Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
           TF++ + A A+LA L LG Q+ +   + GF SNV   ++++ MY++ G +++A + F  +
Sbjct: 481 TFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 540

Query: 438 PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
             +N+VSWNA+++  AQNG  +  ++ FE M+  G  PD +S +SVLS CSH G + EG 
Sbjct: 541 VMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQ 600

Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
            YF SMT+ + + P  EH+  MVD+L R+G  ++A+ L+ QMPF+P+  +W +++ +CRI
Sbjct: 601 YYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRI 660

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
           H N + A+ A   L +++       Y  ++NIY+ +G+ + V+ V+K MR++GVRK    
Sbjct: 661 HGNTKLAELAVKNLLELDA-EGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGC 719

Query: 618 SWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVES 677
           SW+E+ ++VHVFT +D  HPQ  ++ R +E +++++++     +   +           S
Sbjct: 720 SWIEVDNRVHVFTVDDTNHPQIKDVHRMLEEIIKKIEEIKNYANVMNS---------GRS 770

Query: 678 LKYHSERLAIAFALINTP 695
             YHSE+LA+   LI+ P
Sbjct: 771 HNYHSEKLAVPLRLISLP 788



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 251/521 (48%), Gaps = 47/521 (9%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           PN +    N +I GY K G++  A ELF  M +R  VSW  +I   SQ     E    F+
Sbjct: 176 PNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFL 235

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +M    G  P+ +T+A++LS C+          +HA I++      +     L+D Y K 
Sbjct: 236 EMWNQ-GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKC 294

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             L+ AR+VF  + + ++VS+ +LI G A+ G  EEA+ LF +M+ +      FT A  L
Sbjct: 295 GRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVL 354

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC----------------- 224
              +   DI++G Q+HA  +      +V VANAL+ +Y+K  C                 
Sbjct: 355 GVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAK--CGDVWKANHAFELMPIRD 412

Query: 225 ----------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
                           V +AR+ F +MPE + +S+N M+  Y     ++E LK++ ++  
Sbjct: 413 IISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLR 472

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                    FST +S  A+   L +G QI  Q       S V VANS+V MY++CG+ EE
Sbjct: 473 EGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEE 532

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A+++F+++   + V W AM++ Y Q G   + + +F +M       DQ ++ S+L   + 
Sbjct: 533 AQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSH 592

Query: 389 LASLSLGKQLH-SFVIRSGF--MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVS 444
              +S G+    S     G   MS  F    ++D+  ++G L+ A     +MP + N   
Sbjct: 593 SGFVSEGQYYFLSMTKDHGISPMSEHF--VCMVDLLGRAGQLEQAKNLINQMPFKPNAAI 650

Query: 445 WNALISACAQNGD---AQATLKSFEDMVQSGYQPDSVSLLS 482
           W AL++AC  +G+   A+  +K+  ++   G  P S  LL+
Sbjct: 651 WGALLAACRIHGNTKLAELAVKNLLELDAEG--PGSYCLLA 689



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 207/480 (43%), Gaps = 50/480 (10%)

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV-------------------- 226
           L  I + R++HA ++      ++F+ N LL++YS    +                     
Sbjct: 17  LRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTM 76

Query: 227 -----------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD--- 272
                      EA KLF +MPE D VS+N M++ Y  N + + ++K    L + +     
Sbjct: 77  ISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQL 136

Query: 273 ---RSQFPFSTLLSVVANKLDLQI--GRQIHTQTIVT-TAISEVKVANSLVDMYAKCGRF 326
                +F F     V  + LD+ I  G     Q +   T    +   NS++  Y+K G  
Sbjct: 137 HGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSV 196

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           ++A E+FA +    TV W  MIS   Q G   E LN F+EM       +  T+AS+L A 
Sbjct: 197 KKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSAC 256

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
             +  L  G  LH+ ++R     +V++G  L+DMYAK G L+ A Q F  + E N VSW 
Sbjct: 257 TSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWT 316

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           +LI   AQ G  +  L  F  M +     D  +L +VL  C     I  G Q  ++ T  
Sbjct: 317 SLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ-LHAHTIT 375

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
             L        ++V +  + G   +A      MP   D I W+++I +     ++E A++
Sbjct: 376 RGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEKARE 434

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
             D++ +    R+   + +M   Y   G WE   +V   M   GV+      W+   + +
Sbjct: 435 YFDKMPE----RNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT----DWITFSTSI 486



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 130/239 (54%), Gaps = 6/239 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +S   +I+ + ++G++  ARE F+ M +R  +SW  ++  Y Q+  + E  K++
Sbjct: 408 MPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVY 467

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           + M  + G   D++TF+T +S C++        Q+ A   K G++S + + NS+V  Y +
Sbjct: 468 IQMLRE-GVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSR 526

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+++F  +  K+ VS+NA++ G+A+ G   + I++F +M ++G  P   ++ + 
Sbjct: 527 CGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSV 586

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENV---FVANALLDLYSKHDCVVEARKLFGEMP 236
           LS       ++ G+     + K + +  +   FV   ++DL  +   + +A+ L  +MP
Sbjct: 587 LSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFV--CMVDLLGRAGQLEQAKNLINQMP 643



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 21/228 (9%)

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
           F   ++  A L S+ + ++LH+ +I  G  S++F  + LL+MY+  G + DA + F  + 
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
             N+ SWN +IS  A +G  +   K FE M +     DSVS  S++S   H G +E  ++
Sbjct: 67  FPNVYSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIK 122

Query: 499 YFNSM------------TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
              S+             +K+          S++D+  + G  D A+K+  + P  P   
Sbjct: 123 ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTP-NPSLF 181

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            W+S+I     + ++   KKA +   KM + RD   +  M +I +  G
Sbjct: 182 CWNSMIYGYSKYGSV---KKALELFAKMPE-RDTVSWNTMISILSQHG 225


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/661 (32%), Positives = 368/661 (55%), Gaps = 2/661 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + N      LI+ Y K G +  A  +F+++  RT V+W  +I GY+Q      A +LF  
Sbjct: 152 DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M  +G   PD    A+ +S CS         Q+H    +    +   + N L+D YCK  
Sbjct: 212 MGIEG-VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCS 270

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L  AR++F  M  ++ VS+  +I+G+ +   N EAI +F  M   G++P  F   + L+
Sbjct: 271 RLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILN 330

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   LA I  GRQ+HA V+K +   + +V NAL+D+Y+K + + EAR +F  + E D +S
Sbjct: 331 SCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAIS 390

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           YN MI  Y+ N    E++ +F+ ++F     S   F +LL V +++L +++ +QIH   I
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLII 450

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +    ++  A++L+D+Y+KC    +AK +F  L +   V W +MI  + Q    EEA+ 
Sbjct: 451 KSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIK 510

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF ++  + ++ ++ TF +++  ++ LAS+  G+Q H+++I++G  ++    +AL+DMYA
Sbjct: 511 LFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYA 570

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G +K+    F+     +++ WN++I+  AQ+G A+  L+ F  M ++  +P+ V+ + 
Sbjct: 571 KCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVG 630

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSAC+H G + EGL +FNSM   Y + P  EHYAS+V++  RSG    A++ + +MP +
Sbjct: 631 VLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIK 690

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P   +W S++++C +  N E  + AA+     +   D+ PYV +SNIYA  G W  V  +
Sbjct: 691 PAAAVWRSLLSACHLFGNAEIGRYAAEMALLADP-TDSGPYVLLSNIYASKGLWADVHNL 749

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           ++ M   G  K T  SW+E+  +VH F      HP+   I   ++ L   +K  GY PDT
Sbjct: 750 RQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVPDT 809

Query: 663 S 663
           S
Sbjct: 810 S 810



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 195/731 (26%), Positives = 335/731 (45%), Gaps = 79/731 (10%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           TN+L+ GY   G L  AR LF+ M  R  VSW  +I  Y+Q  +   A  LFV  +    
Sbjct: 56  TNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASC 115

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+    A++L  C++    +   QVH   +K   ++ + +  +L++ Y K+ C+D A 
Sbjct: 116 EVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAM 175

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF  +P +  V++N +ITG+A+ G    A++LF  M   G +P  F  A+A+SA   L 
Sbjct: 176 LVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALG 235

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            +  GRQ+H +  ++    +  V N L+DLY K   +  ARKLF  M   + VS+  MI+
Sbjct: 236 FLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMIS 295

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            Y  N    E++ +F  +    +    F  +++L+   +   +  GRQIH   I     +
Sbjct: 296 GYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEA 355

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           +  V N+L+DMYAKC    EA+ +F  L+    + + AMI  Y +  +L EA+N+F  M 
Sbjct: 356 DEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMR 415

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             ++     TF S+L  S+   ++ L KQ+H  +I+SG   ++++ SAL+D+Y+K   + 
Sbjct: 416 FFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVN 475

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA   F  +  +++V WN++I   AQN   +  +K F  ++ SG  P+  + +++++  S
Sbjct: 476 DAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVAS 535

Query: 489 -----------------------------------HCGLIEEGLQYFNSMTQKYKLRPKK 513
                                               CG I+EG   F S   +  +    
Sbjct: 536 TLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVIC--- 592

Query: 514 EHYASMVDILCRSGCFDEAE---KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
             + SM+    + G  +EA    +LM +   EP+ + +  V+++C    +  F  +  + 
Sbjct: 593 --WNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSAC---AHAGFVGEGLNH 647

Query: 571 LFKMEKLRDAAP----YVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
              M+   D  P    Y ++ N++  +G+  +     K   ER   K  A  W  L S  
Sbjct: 648 FNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAA----KEFIERMPIKPAAAVWRSLLSAC 703

Query: 627 HVFTANDELHPQTNEIR------------------------RKIENLMQEMKKEGYKPDT 662
           H+F  N E+     E+                           + NL Q+M   G   +T
Sbjct: 704 HLF-GNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKET 762

Query: 663 SCALHDEDEEI 673
            C+  +  +E+
Sbjct: 763 GCSWIEVTKEV 773



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 249/496 (50%), Gaps = 3/496 (0%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA     G    L + N L+  Y  +  L  AR +F  MP ++ VS+ ++I+ + + G 
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 155 NEEAIKLFVEMQHLGFK-PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
           ++ AI LFV  Q    + P++F  A+ L A      ++LG QVH   VK +   NV+V  
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           AL++LY+K  C+ EA  +F  +P    V++N +IT YA       +L+LF  +       
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +F  ++ +S  +    L+ GRQIH     +   ++  V N L+D+Y KC R   A+++F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
             + + + V WT MIS Y+Q     EA+ +F  M +A    D     SIL +   LA++ 
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 394 LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACA 453
            G+Q+H+ VI++   ++ +  +AL+DMYAK   L +A   F  + E + +S+NA+I   +
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399

Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK 513
           +N D    +  F+ M     +P  ++ +S+L   S    IE   Q  + +  K       
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQ-IHGLIIKSGTSLDL 458

Query: 514 EHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
              ++++D+  +    ++A+ +   + ++ D ++W+S+I     ++  E A K  +QL  
Sbjct: 459 YAASALIDVYSKCSLVNDAKTVFNMLHYK-DMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517

Query: 574 MEKLRDAAPYVAMSNI 589
                +   +VA+  +
Sbjct: 518 SGMAPNEFTFVALVTV 533



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 3/371 (0%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           L   +HA       ++++F+ N LL  YS    + +AR LF  MP  + VS+  +I+ Y 
Sbjct: 36  LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYT 95

Query: 252 WNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
            + +   ++ LF   Q    +  ++F  +++L        + +G Q+H   +     + V
Sbjct: 96  QHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANV 155

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  +L+++YAK G  +EA  +F  L   + V W  +I+ Y Q G    AL LF  M   
Sbjct: 156 YVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIE 215

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D+   AS + A + L  L  G+Q+H +  RS   ++    + L+D+Y K   L  A
Sbjct: 216 GVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAA 275

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F  M  RN+VSW  +IS   QN      +  F +M Q+G+QPD  +  S+L++C   
Sbjct: 276 RKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSL 335

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
             I +G Q  ++   K  L   +    +++D+  +     EA  +   +  E D I +++
Sbjct: 336 AAIWQGRQ-IHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALA-EDDAISYNA 393

Query: 551 VINSCRIHKNL 561
           +I     +++L
Sbjct: 394 MIEGYSKNRDL 404


>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 767

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/721 (33%), Positives = 382/721 (52%), Gaps = 56/721 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++  + N +I  Y  S  LA A +LF S   +  +SW  LI GY +     EAF LF
Sbjct: 55  MPERDEFTWNTMIVAYSNSRRLADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAFNLF 114

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M++DG   P+  T  ++L  C+         Q+H   IK G++  + + N L+  Y +
Sbjct: 115 WEMQSDG-IKPNEYTLGSVLRMCTSLLLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 173

Query: 121 IRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
            + +  A  +F  M  +K++V++ +++TG+++ G   +AI+ F +++  G + + +TF +
Sbjct: 174 CKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRDGNQSNQYTFPS 233

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L+A   ++   +G QVH  +VK+ F  N++V +AL+D+Y+K   +  AR L   M   D
Sbjct: 234 VLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALIDMYAKCRDLESARALLEGMEVDD 293

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIH 298
            VS+N MI         +E+L +F  +         F   ++L+  A+ + +++I    H
Sbjct: 294 VVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFTIPSILNCFASSRTEMKIASSAH 353

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
                      VK    L  +    G  + A ++F  +     + WTA+++     G  E
Sbjct: 354 CLI--------VKPGMRLTSL----GIMDSALKVFEGMIEKDVISWTALVTGNTHNGFYE 401

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF  M    I  DQ   AS+L ASAEL  L  G+Q+H   I+SGF S++   ++L+
Sbjct: 402 EALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 461

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
            MY K GSL+DA   F  M  R++++W  +I                             
Sbjct: 462 TMYTKCGSLEDANVIFNSMEIRDLITWTCII----------------------------- 492

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
                       GLIEE  +YF+SM   Y + P  EHYA M+D+  RSG F +AE+L+ Q
Sbjct: 493 -----------VGLIEEAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKAEELLHQ 541

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           M  EPD  +W +++ + R H N+E  ++AA  L K+E   +A PYV +SN+Y+ AG+ + 
Sbjct: 542 MEVEPDATVWKAILAASRKHGNIENGERAAKTLMKLEP-NNAVPYVLLSNMYSAAGRQDE 600

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            + V++ M+ R + K    SWVE K KVH F + D  HP+  EI  K++ +M  +K+ GY
Sbjct: 601 AANVRRLMKSRNINKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 660

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
             D S ALHD D+E K   L YHSE+LA+AF L+  P G+PI ++KNLR C DCH+A+KL
Sbjct: 661 LADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKL 720

Query: 719 I 719
           +
Sbjct: 721 L 721



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 212/457 (46%), Gaps = 64/457 (14%)

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY--------------------- 250
           +N LL   SK   V EAR++F +MPE D  ++N MI  Y                     
Sbjct: 32  SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLADAEQLFRSNPVKNT 91

Query: 251 -AWNEQYK---------ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            +WN             E+  LF E+Q      +++   ++L +  + L L  G QIH  
Sbjct: 92  ISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGH 151

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEE 359
           TI T    +V V N L+ MYA+C R  EA+ +F  ++   + V WT+M++ Y Q G   +
Sbjct: 152 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFK 211

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           A+  F ++ R    ++Q TF S+L A A +++  +G Q+H  +++SGF +N++  SAL+D
Sbjct: 212 AIECFRDLRRDGNQSNQYTFPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALID 271

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MYAK   L+ A    + M   ++VSWN++I  C + G  +  L  F  M +   + D  +
Sbjct: 272 MYAKCRDLESARALLEGMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFT 331

Query: 480 LLSVL------------SACSHC------------GLIEEGLQYFNSMTQKYKLRPKKEH 515
           + S+L            ++ +HC            G+++  L+ F  M +K  +      
Sbjct: 332 IPSILNCFASSRTEMKIASSAHCLIVKPGMRLTSLGIMDSALKVFEGMIEKDVIS----- 386

Query: 516 YASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           + ++V     +G ++EA KL   M      PD+I+ +SV+++      LEF ++      
Sbjct: 387 WTALVTGNTHNGFYEEALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYI 446

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           K       +   ++  +Y   G  E  + +  +M  R
Sbjct: 447 KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 483



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 37/186 (19%)

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN---------------- 441
           +HS   R+   SN+     LL   +KSG + +A Q F +MPER+                
Sbjct: 21  IHSHADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRR 75

Query: 442 ---------------IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
                           +SWNALIS   ++G        F +M   G +P+  +L SVL  
Sbjct: 76  LADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 135

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C+   L+  G Q  +  T K            ++ +  +     EAE L   M  E + +
Sbjct: 136 CTSLLLLLRGEQ-IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFDTMAGEKNNV 194

Query: 547 MWSSVI 552
            W+S++
Sbjct: 195 TWTSML 200


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/591 (36%), Positives = 327/591 (55%), Gaps = 39/591 (6%)

Query: 195 QVHAFVVKTNFVENVFVANALLDL--YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           Q+HA  + T    + FVA+ +L     S H  +  AR LF  + + D    N +I  YA+
Sbjct: 53  QIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAF 112

Query: 253 NEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +    +++  + E+  +     D   FP   LL   +    L++G  IH+        SE
Sbjct: 113 SPNPIDAVVFYSEMTESSVVFPDVHTFPL--LLKACSEIPSLRLGEAIHSHVFKLGWSSE 170

Query: 310 VKVANSLVDMYA-------------------------------KCGRFEEAKEIFANLSH 338
           V V+N LV MYA                               KCG F+ A+ +F  +  
Sbjct: 171 VSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPD 230

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
              V W+ MI+ YVQ+   +E L LF +M    I  +++   + L A A L ++  G+ +
Sbjct: 231 RDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWI 290

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
             ++ R      V  G+AL+DMY+K GS++ A++ F +M E+N+++W+A+I+  A NG  
Sbjct: 291 ERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQG 350

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L  F  M   G +P+ V+ + +L+ACSH  L++EG  +F+SMT  Y L+P   H+  
Sbjct: 351 KDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCC 410

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           MVD+  R+G  D+A+ ++  MPF+P+  +W +++N+CRIH + E  ++   +L +++   
Sbjct: 411 MVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDP-N 469

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
               YV +SNIYA  G+W+ V+++++ MRER V K    S+++L   +H F A D  HPQ
Sbjct: 470 HGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQ 529

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
              I  K+  + QE+K  GYKPDT   L D DEE K  +L +HSE+LAIAF LI T  G+
Sbjct: 530 LEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGT 589

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            I + KNLR C DCH+A KLISKI  REI VRD  RFHHF+DG CSC DFW
Sbjct: 590 TIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 184/426 (43%), Gaps = 38/426 (8%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR---CLDLA 127
           P  +    +L   S   T  +L Q+HA  I  G  S   + + ++ S+  +     +  A
Sbjct: 30  PQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRIL-SFAALSPHGSIPYA 88

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK-PSDFTFAAALSAGVG 186
           R +F  + + D    N LI  +A      +A+  + EM       P   TF   L A   
Sbjct: 89  RFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSE 148

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYS-------------------------- 220
           +  + LG  +H+ V K  +   V V+N L+ +Y+                          
Sbjct: 149 IPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIM 208

Query: 221 -----KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
                K      AR++F  MP+ D VS++VMI  Y    ++KE L LF+++   + + ++
Sbjct: 209 IGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNE 268

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
                 LS  A+   ++ G+ I            V++  +L+DMY+KCG  E A E+F  
Sbjct: 269 SVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHK 328

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   + + W+AMI+     G  ++ALNLF +M    +  ++ TF  IL A +    +  G
Sbjct: 329 MKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEG 388

Query: 396 KQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACA 453
               HS     G   N      ++D+Y ++G L  A    K MP + N   W AL++AC 
Sbjct: 389 CSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACR 448

Query: 454 QNGDAQ 459
            +GD +
Sbjct: 449 IHGDTE 454



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 172/397 (43%), Gaps = 44/397 (11%)

Query: 6   TVSTNMLISGYVKS-----------GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFR 54
           T++T +    +V S           G++  AR LF  +          LI  Y+      
Sbjct: 58  TITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPI 117

Query: 55  EAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSL 114
           +A   + +M       PD  TF  LL  CSE  +      +H+ + K G++S + + N L
Sbjct: 118 DAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFL 177

Query: 115 VD-------------------------------SYCKIRCLDLARRVFKEMPQKDSVSFN 143
           V                                 Y K      ARR+F+ MP +D VS++
Sbjct: 178 VQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWS 237

Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
            +I G+ +E   +E + LF +M     +P++     ALSA   L  +  G+ +  ++ + 
Sbjct: 238 VMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERK 297

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
           N    V +  AL+D+YSK   V  A ++F +M E + ++++ MI   A N Q K++L LF
Sbjct: 298 NVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLF 357

Query: 264 RELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
            +++      ++  F  +L+  ++ KL  +     H+ T +            +VD+Y +
Sbjct: 358 SQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGR 417

Query: 323 CGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            G  ++A+ +  ++    ++  W A+++A    G+ E
Sbjct: 418 AGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTE 454



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 2/236 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  +  S N++I GY+K G   +AR +F +M DR  VSW+++I GY Q+++F+E   LF 
Sbjct: 198 PECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQ 257

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           DM  +   +P+       LS C+      +   +   + +      + +  +L+D Y K 
Sbjct: 258 DMMGE-KIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC 316

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             ++ A  VF +M +K+ ++++A+I G A  G  ++A+ LF +M+  G KP++ TF   L
Sbjct: 317 GSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGIL 376

Query: 182 SAGVGLADIALGRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A      +  G    H+         N      ++DLY +   + +A+ +   MP
Sbjct: 377 NACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMP 432


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/590 (36%), Positives = 343/590 (58%), Gaps = 37/590 (6%)

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           ++H+ ++K  F ++  ++N LLD+Y K   + +A +LF EMP  D VS+  ++T +    
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 255 QYKESLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
             + +L +   + FT        F F+ ++   ++   L++G+Q+H + +++    +  V
Sbjct: 84  IPRRTLSMLNTM-FTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVV 142

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI------- 365
            +SL+DMY KCG+ ++A+ +F ++   ++V WT+MIS Y + G   EA++LF+       
Sbjct: 143 KSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNL 202

Query: 366 ------------------------EMCRANIS-ADQATFASILRASAELASLSLGKQLHS 400
                                   EM R  I   D    +S++   A LA L LGKQ+H 
Sbjct: 203 FSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG 262

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            VI  GF S +F  +AL+DMYAK   +  A   F  MP ++++SW ++I   AQ+G A+ 
Sbjct: 263 LVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEE 322

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L  +++MV S  +P+ V+ + +L ACSH GL+  G + F SMT  Y + P  +HY  ++
Sbjct: 323 ALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLL 382

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG  DEAE L+ ++PF+PDE  W+S++++C  H NLE   + AD++  + K  D 
Sbjct: 383 DLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDL-KPEDP 441

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDEL-HPQT 639
           + Y+ +SN+YA A  W SVS+V+K M    VRK   YS ++      VF A +   HP  
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
           NEI   +++L  EM+K GY P+TS  L+D +++ K + L +HSERLA+A+ L+    G+ 
Sbjct: 502 NEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTI 561

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I ++KNLR C DCH  +K IS I  REI VRD++R+HHFK+G CSC DFW
Sbjct: 562 IRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 211/423 (49%), Gaps = 35/423 (8%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F   L  C+   +A+   ++H+ IIK G++   ++ N+L+D Y K   +  A ++F EMP
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGR 194
            +D VS+ +++T   K  +    + +   M  H G +P  F FA  + A   L  + LG+
Sbjct: 66  NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125

Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
           QVHA  + + F ++  V ++L+D+Y+K     +AR +F  +   + VS+  MI+ YA + 
Sbjct: 126 QVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSG 185

Query: 255 QYKESLKLF-----REL------------------QFTRFDRSQ---------FPFSTLL 282
           +  E++ LF     R L                   F+ F+  +            S+++
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              AN   L++G+QIH   I     S + ++N+LVDMYAKC     AK+IF  +     +
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSF 401
            WT++I    Q G  EEAL L+ EM  + I  ++ TF  +L A +    +S G++L  S 
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQA 460
                   ++   + LLD+ ++SG L +A     ++P + +  +W +L+SAC ++ + + 
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425

Query: 461 TLK 463
            ++
Sbjct: 426 GVR 428



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 34/395 (8%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++++ +N L+  Y K G +  A +LF+ M +R  VSW  ++  +++    R    +   
Sbjct: 35  DKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M T  G  PD+  FA ++  CS         QVHA  +   +    ++ +SL+D Y K  
Sbjct: 95  MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCG 154

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFV------------------- 163
             D AR VF  +  K+SVS+ ++I+G+A+ G   EA+ LF+                   
Sbjct: 155 QPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQ 214

Query: 164 ------------EMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
                       EM+  G    D    ++ +     LA + LG+Q+H  V+   F   +F
Sbjct: 215 SGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
           ++NAL+D+Y+K   ++ A+ +F  MP  D +S+  +I   A + + +E+L L+ E+  +R
Sbjct: 275 ISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSR 334

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEA 329
              ++  F  LL   ++   +  GR++        +I+  ++    L+D+ ++ G  +EA
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394

Query: 330 KEIFANLSHISTVP-WTAMISAYVQKGNLEEALNL 363
           + +   +      P W +++SA ++  NLE  + +
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/729 (33%), Positives = 397/729 (54%), Gaps = 62/729 (8%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           LFNS ++     +T ++  YS      +   ++  M+   G  PD   +  L+       
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQ-GCGVRPDAFVYPILIKSAGTGG 114

Query: 88  TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNAL 145
                I  HA ++K G+ S   + N+++D Y ++  +  AR+VF E+P  ++    +NA+
Sbjct: 115 -----IGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++G+ K     +A  LF  M                                        
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPE-------------------------------------- 191

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             NV    A++  Y+K   +  AR+ F  MPE   VS+N M++ YA N   +E+L+LF E
Sbjct: 192 -RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLD----LQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           +     +  +  + T++S  +++ D      + R +H + I         V  +L+DMYA
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCF----VRTALLDMYA 306

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-ISADQATFA 380
           K G  + A+++F  +   + V W +MI+ Y Q G    A+ LF EM  A  ++ D+ T  
Sbjct: 307 KFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 366

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           S++ A   L +L LG  +  F+  +    ++   +A++ MY++ GS++DA + F+EM  R
Sbjct: 367 SVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR 426

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
           ++VS+N LIS  A +G     +     M + G +PD V+ + VL+ACSH GL+EEG + F
Sbjct: 427 DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF 486

Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
            S+       P  +HYA MVD+L R G  ++A++ M +MP EP   ++ S++N+ RIHK 
Sbjct: 487 ESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQ 541

Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
           +E  + AA++LF++E   ++  ++ +SNIYA AG+W+ V ++++AM++ GV+K T +SWV
Sbjct: 542 VELGELAANKLFELEP-DNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 600

Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
           E   K+H F   D  H ++++I + +  L ++M++ GY  D SC L D +EE K E +  
Sbjct: 601 EYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGT 660

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSE+LAI +AL+ +  G+ I V+KNLR C DCH AIK+ISK+ GR I VRD++RFH F D
Sbjct: 661 HSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFND 720

Query: 741 GFCSCRDFW 749
           G CSC+D+W
Sbjct: 721 GLCSCKDYW 729



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 179/335 (53%), Gaps = 14/335 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP +N ++   +++GY K  +L  AR  F+ M +R+ VSW  ++ GY+Q     EA +LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLF 248

Query: 61  VDMRTDGGSDPDYVTFATLLSGCS---EPDTANELIQ-VHADIIKFGYNSILIICNSLVD 116
            +M  + G +PD  T+ T++S CS   +P  A  L++ +H   I+        +  +L+D
Sbjct: 249 DEM-VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLN----CFVRTALLD 303

Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDF 175
            Y K   LD AR++F  MP ++ V++N++I G+A+ G +  AI+LF EM       P + 
Sbjct: 304 MYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 363

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T  + +SA   L  + LG  V  F+ +     ++   NA++ +YS+   + +A+++F EM
Sbjct: 364 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 423

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
              D VSYN +I+ +A +    E++ L   ++    +  +  F  +L+  ++   L+ GR
Sbjct: 424 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 483

Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
           ++  ++I   AI        +VD+  + G  E+AK
Sbjct: 484 KVF-ESIKDPAIDHYA---CMVDLLGRVGELEDAK 514


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/591 (37%), Positives = 336/591 (56%), Gaps = 34/591 (5%)

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +G+++H  ++KT   +   ++N L+++Y K   + +A  LF ++P  D +S+  ++T   
Sbjct: 21  IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANN 80

Query: 252 WNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
                  +L +F  + +        + F+ L+   A    ++ G+Q+H   IV+    + 
Sbjct: 81  QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY------------------- 351
            V +SLVDMYAKCG  +  + +F ++S  +++ WTAMIS Y                   
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200

Query: 352 ------------VQKGNLEEALNLFIEMCRANIS-ADQATFASILRASAELASLSLGKQL 398
                       VQ GN  ++  LF+EM    I   D    +SI+ ASA LA L LGKQ+
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
           H  VI  G+ S++F  +AL+DMYAK   +  A + F  M +R+IVSW ++I   AQ+G A
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320

Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
           +  L  +  M+ +G +P+ V+ + ++ ACSH GL+ +G  +FNSM + Y + P  +HY  
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380

Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
           ++D+L RSG  +EAE L+  MPF+PDE  W++++++C  H+N     + AD L  + K  
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSL-KPE 439

Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
           D + Y+ +SNIYA A  WESVS+V++ M    V+K   YS + L  +  VF A +  HP 
Sbjct: 440 DPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPA 499

Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
             EI   +E L  EMKK GY PDTS  LHD +++ K   L +HSERLA+A+ L+    G 
Sbjct: 500 KEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGM 559

Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            + ++KNLR C DCH  +K IS I  REI VRD++R+HHFKDG CSC +FW
Sbjct: 560 VLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 201/415 (48%), Gaps = 35/415 (8%)

Query: 73  YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
           Y      L  C+   +     ++H  IIK G +    + N+L++ Y K   +  A  +F 
Sbjct: 3   YSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFN 62

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIA 191
           ++P +D +S+ +++T   +  L    + +F  M +  G +P  + FA  + A   L  + 
Sbjct: 63  QLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMK 122

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSK----------HDCV---------------- 225
            G+QVHA  + +   ++  V ++L+D+Y+K           D +                
Sbjct: 123 QGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYA 182

Query: 226 -----VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD-RSQFPFS 279
                ++A +LF +MP  + +S+  +I+    +  + +S  LF E++    D    F  S
Sbjct: 183 QSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILS 242

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           +++   AN   L +G+QIH   I+    S + V+N+LVDMYAKC     AK+IF  +   
Sbjct: 243 SIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
             V WT++I    Q G  EEAL+L+  M    +  ++ TF  ++ A + +  +S G+   
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFF 362

Query: 400 SFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           + +I+  G   ++   + LLD+ ++SG L++A    K MP + +  +W AL+SAC
Sbjct: 363 NSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSAC 417



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 204/450 (45%), Gaps = 46/450 (10%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y K G +  A  LFN +  R  +SW  ++   +Q N       +F  M    G
Sbjct: 41  SNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDG 100

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD+  FA L+  C+      +  QVHA  I    +   ++ +SLVD Y K    D+ R
Sbjct: 101 LQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGR 160

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIK---------------------------- 160
            VF  +  K+S+S+ A+I+G+A+ G   +AI+                            
Sbjct: 161 VVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVD 220

Query: 161 ---LFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
              LF+EM+  G    D F  ++ + A   LA + LG+Q+H  V+   +  ++FV+NAL+
Sbjct: 221 SFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALV 280

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           D+Y+K   V+ A+K+FG M + D VS+  +I   A +   +E+L L+  +  T    ++ 
Sbjct: 281 DMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEV 340

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFAN 335
            F  L+   ++   +  GR      I    I+  ++    L+D+ ++ G  EEA+ +   
Sbjct: 341 TFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKA 400

Query: 336 LS-HISTVPWTAMISAYVQKGNL-------EEALNLFIE-----MCRANISADQATFASI 382
           +        W A++SA     N        +  L+L  E     +  +NI A  A + S+
Sbjct: 401 MPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESV 460

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVF 412
            +    +A++ + K+     I  G  S VF
Sbjct: 461 SKVRRLMAAMEVKKEPGYSCIVLGKESQVF 490



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 1/235 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           ++N++S   +ISGY +SG    A +LF  M  +  +SWT LI G  Q   + ++F LF++
Sbjct: 168 SKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFME 227

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           MR+ G    D    ++++   +         Q+H  +I  GY S L + N+LVD Y K  
Sbjct: 228 MRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCS 287

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A+++F  M Q+D VS+ ++I G A+ GL EEA+ L+  M   G KP++ TF   + 
Sbjct: 288 DVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIY 347

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
           A   +  ++ GR     ++K   +         LLDL S+   + EA  L   MP
Sbjct: 348 ACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMP 402



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 15/240 (6%)

Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
           L+A A   S  +GK+LH  +I++G        + L++MY K G ++DA+  F ++P R+ 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 443 VSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           +SW ++++A  Q      TL  F  M  Q G QPD      ++ AC+  G +++G Q   
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQ--- 126

Query: 502 SMTQKYKLRPKKEH---YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRI 557
            +   + + P  +     +S+VD+  + G  D    +   +    + I W+++I+   + 
Sbjct: 127 -VHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSIS-SKNSISWTAMISGYAQS 184

Query: 558 HKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAY 617
            + L+     A QLF+   +++   + A+ +    +G W     +   MR +G+  V  +
Sbjct: 185 GRKLD-----AIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPF 239


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/608 (35%), Positives = 342/608 (56%), Gaps = 6/608 (0%)

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N L++  ++ G    A+++F  +     +P+  TF   L+A   L D+     V     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPS-SARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
              +  +VFV +ALL LYS+   + EA ++F  MP  D V+++ M+  +    +  E+L 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
           ++  ++       +     ++    +  + +IG  +H + +      +V    SLV MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           K G  + A ++F  + + + V W+A+IS + Q G   EAL+LF E+    +        S
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
            L A A +  L LGK +H F++R         G+A+LDMY+K GSL+ A + F ++  R+
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           +V WNA+I+ C  +G     L  F+++ ++G +PD  +  S+LSA SH GL+EEG  +F+
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            M +++ + P ++HY  +VD+L RSG  +EA  ++A M  EP   +W  +++ C  +K L
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           E  +  A ++ ++    D      +SN+YA A +W+ V +++K M++ G +KV  YS +E
Sbjct: 494 ELGETIAKKILELRP-EDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIE 552

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           +K   H F   D+ HPQ  EI + +  L  EM+K GY P T    HD DE+   + L YH
Sbjct: 553 VKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDED---QLLSYH 609

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           SERLAIAF L+NT  G+ ++++KNLR C DCH AIK ISKI  REI VRD+ RFHHFKDG
Sbjct: 610 SERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDG 669

Query: 742 FCSCRDFW 749
            CSC D+W
Sbjct: 670 ACSCGDYW 677



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 214/448 (47%), Gaps = 7/448 (1%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  L+  +S+      A ++F  + +   + P+  TF   L+ C+     +    V    
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSS--ARPNSTTFTLTLTACARLGDLDAAESVRVRA 133

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
              GY   + +C++L+  Y +   ++ A RVF  MP+KD V+++ ++ GF   G   EA+
Sbjct: 134 FAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            ++  M+  G    +      + A +   +  +G  VH  +++     +V    +L+ +Y
Sbjct: 194 AMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMY 253

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS 279
           +K+  +  A ++F  MP  + V+++ +I+ +A N +  E+L LFRELQ        +   
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALV 313

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
           + L   A+   L++G+ IH   I+     +  +  +++DMY+KCG  E A+++F  LS  
Sbjct: 314 SALLACASVGFLKLGKSIHG-FILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR 372

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
             V W A+I+     G   +AL LF E+    I  D ATFAS+L A +    +  GK   
Sbjct: 373 DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWF 432

Query: 400 SFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM-PERNIVSWNALISACAQNGD 457
             +I+  G          ++D+ A+SG +++A      M  E  I  W  L+S C  N  
Sbjct: 433 DRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKK 492

Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            +      + +++   +P+ + +L+++S
Sbjct: 493 LELGETIAKKILE--LRPEDIGVLALVS 518



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 35/360 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ V+ + +++G+V +G                                  EA  ++
Sbjct: 168 MPRKDRVAWSTMVAGFVTAGRPV-------------------------------EALAMY 196

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             MR  G SD D V    ++  C     A     VH  +++      ++   SLV  Y K
Sbjct: 197 SRMREHGVSD-DEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAK 255

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              LD+A +VF+ MP ++ V+++ALI+GFA+ G   EA+ LF E+Q  G +P  +   +A
Sbjct: 256 NGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSA 315

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   +  + LG+ +H F+++        +  A+LD+YSK   +  ARKLF ++   D 
Sbjct: 316 LLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 374

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           V +N +I C   +    ++L LF+EL  T        F++LLS +++   ++ G+    +
Sbjct: 375 VLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 434

Query: 301 TIVTTAISEV-KVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
            I    I    K    +VD+ A+ G  EEA ++ A++    T+  W  ++S  +    LE
Sbjct: 435 MIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLE 494


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/679 (34%), Positives = 385/679 (56%), Gaps = 13/679 (1%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F+ LL  C +  + + +  + A ++K G+ +  I  + LVD+  K   +D AR+VF  M 
Sbjct: 68  FSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMS 126

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           ++  V++N+LI    K   ++EA++++  M      P ++T ++   A    +D++L ++
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA---FSDLSLEKE 183

Query: 196 V---HAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
               H   V     V NVFV +AL+D+Y K     EA+ +   + E D V    +I  Y+
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
              +  E++K F+ +   +   +++ ++++L    N  D+  G+ IH   + +   S + 
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
              SL+ MY +C   +++  +F  + + + V WT++IS  VQ G  E AL  F +M R +
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  +  T +S LR  + LA    G+Q+H  V + GF  + ++GS L+D+Y K G    A 
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  + E +++S N +I + AQNG  +  L  FE M+  G QP+ V++LSVL AC++  
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG + F+S  +K K+    +HYA MVD+L R+G  +EAE L  ++   PD ++W ++
Sbjct: 484 LVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTL 541

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +++C++H+ +E A++   ++ ++E   D    + MSN+YA  G+W  V ++K  M++  +
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEP-GDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKL 600

Query: 612 RKVTAYSWVELKSKVHVFTANDEL-HPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           +K  A SWVE+  + H F A D   HP + +I   +E L+++ K  GY  D SC   D +
Sbjct: 601 KKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDME 660

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           E  K  SL  HSE+LAIAFA+     GS I ++KNLR C DCH+ IK++S++  REI  R
Sbjct: 661 ETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICR 719

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           DS RFHHF+DG CSC D+W
Sbjct: 720 DSKRFHHFRDGSCSCGDYW 738



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 220/449 (48%), Gaps = 6/449 (1%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           +S + L+   +K G++  AR++F+ M +R  V+W  LI    +  + +EA +++  M T+
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN-SILIICNSLVDSYCKIRCLD 125
               PD  T +++    S+     E  + H   +  G   S + + ++LVD Y K     
Sbjct: 160 -NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
            A+ V   + +KD V   ALI G++++G + EA+K F  M     +P+++T+A+ L +  
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
            L DI  G+ +H  +VK+ F   +    +LL +Y +   V ++ ++F  +   + VS+  
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I+    N + + +L  FR++       + F  S+ L   +N    + GRQIH   IVT 
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH--GIVTK 396

Query: 306 -AISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 K A S L+D+Y KCG  + A+ +F  LS +  +    MI +Y Q G   EAL+L
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F  M    +  +  T  S+L A      +  G +L     +   M      + ++D+  +
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGR 516

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISAC 452
           +G L++A     E+   ++V W  L+SAC
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLLSAC 545



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 162/346 (46%), Gaps = 1/346 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    + L+  YVK G    A+ + + + ++  V  T LI GYSQK +  EA K F  M 
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +    P+  T+A++L  C           +H  ++K G+ S L    SL+  Y +   +
Sbjct: 260 VEK-VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
           D + RVFK +   + VS+ +LI+G  + G  E A+  F +M     KP+ FT ++AL   
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
             LA    GRQ+H  V K  F  + +  + L+DLY K  C   AR +F  + EVD +S N
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            MI  YA N   +E+L LF  +       +     ++L    N   ++ G ++       
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
             +        +VD+  + GR EEA+ +   + +   V W  ++SA
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/557 (38%), Positives = 329/557 (59%), Gaps = 19/557 (3%)

Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLF---GEMPEVDGVSYNVMITCYAWNEQYKESL 260
           N + N  +   L+ L+S    V EAR++F   GE  ++    +  M   Y+ N   KE+L
Sbjct: 104 NLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEAL 163

Query: 261 KLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
            L+ E+  QF +     F FS  L   ++  DLQ GR +H Q +  T   +  V N+L+ 
Sbjct: 164 LLYYEMVCQFGQL--GNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLR 221

Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
           +Y++ G F+EA  +F  + H + V W ++I+  V+K  + EA+  F  M    +     T
Sbjct: 222 LYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVT 281

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             +IL   A + +L  GK++H+ +++S    +    ++L+DMYAK G++    + F  M 
Sbjct: 282 LTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQ 341

Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ 498
            +++ SWN LI+  A NG     ++SF++M+ SG+ PD ++ +++LS CSH GL ++G +
Sbjct: 342 GKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCR 401

Query: 499 YFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            F  M   Y + P  EHYA +VD+L R+G   EA +++  MPF+P   +W S++NSCR+H
Sbjct: 402 LFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLH 461

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYS 618
            N+  A+  A +LF++E   +A  YV +SNIYA AG WESV  V++ M +RG+ K    S
Sbjct: 462 GNVPLAEAVAKRLFELEP-NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCS 520

Query: 619 WVELKSKVHVFTANDELHPQTNEIRRKIE------NLMQEMKKEGYKPDTSCALHDEDEE 672
           W+++KSK+H F A       +NE R  +E       LM+ M++ GY PDT   LHD  EE
Sbjct: 521 WLQIKSKIHTFVAGG-----SNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEE 575

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
           ++   +  HSERLA  FALINT  G PI + KNLR C DCH+ +K +SK+TGR I +RD+
Sbjct: 576 MRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDT 635

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHFKDG CSC+D+W
Sbjct: 636 NRFHHFKDGVCSCKDYW 652



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 11/352 (3%)

Query: 114 LVDSYCKIRCLDLARRVFKE------MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           L+  +   R +D ARRVF++      +P+   V   A+  G+++ G  +EA+ L+ EM  
Sbjct: 115 LITLFSVCRRVDEARRVFEDGGEDVDLPESVWV---AMGIGYSRNGYPKEALLLYYEMVC 171

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
              +  +F F+ AL A   L D+  GR VHA V+K     +  V NALL LYS+  C  E
Sbjct: 172 QFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDE 231

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
           A ++F  MP  + VS+N +I      +   E+++ FR +Q      S    +T+L V A 
Sbjct: 232 ALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCAR 291

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
              L  G++IH   + +TA  +  V NSLVDMYAKCG  +  + +F  +       W  +
Sbjct: 292 VTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTL 351

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSG 406
           I+ Y   G + EA+  F EM  +  S D  TF ++L   +       G +L   + +  G
Sbjct: 352 ITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYG 411

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGD 457
               V   + L+D+  ++G +K+A++  K MP +   S W +L+++C  +G+
Sbjct: 412 ISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGN 463



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 163/341 (47%), Gaps = 6/341 (1%)

Query: 25  ARELFNSM---VDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
           AR +F      VD     W  +  GYS+    +EA  L+ +M    G   ++  F+  L 
Sbjct: 128 ARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNF-AFSMALK 186

Query: 82  GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVS 141
            CS+         VHA ++K   +   ++ N+L+  Y +  C D A RVF  MP ++ VS
Sbjct: 187 ACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVS 246

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
           +N+LI G  K+    EAI+ F  MQ  G   S  T    L     +  +  G+++HA +V
Sbjct: 247 WNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIV 306

Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           K+    +  V N+L+D+Y+K   +   R++F  M   D  S+N +IT YA N +  E+++
Sbjct: 307 KSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAME 366

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMY 320
            F+E+  + F      F  LLS  ++      G ++     +   IS  V+    LVD+ 
Sbjct: 367 SFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVL 426

Query: 321 AKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
            + GR +EA EI  N+    T   W +++++    GN+  A
Sbjct: 427 GRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 467



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y K G +   R +FN M  +   SW  LI GY+   +  EA + F +M   G S
Sbjct: 318 NSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFS 377

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADI-IKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            PD +TF  LLSGCS    A++  ++   + + +G +  +     LVD   +   +  A 
Sbjct: 378 -PDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEAL 436

Query: 129 RVFKEMPQKDSVSF 142
            + K MP K + S 
Sbjct: 437 EIVKNMPFKPTGSI 450


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/584 (36%), Positives = 333/584 (57%), Gaps = 38/584 (6%)

Query: 200 VVKTNFVENVFVANALLDLYSKHDC--VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK 257
           +++T    + F A+ ++   + HD   +  AR +F ++P     + N +I  Y      +
Sbjct: 1   MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60

Query: 258 ESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
           +++  ++ +     D  +F F +L        +   G+Q+H  +      S+  + N+L+
Sbjct: 61  QAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLM 117

Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY-------------------------- 351
           +MY+ CG    A+++F  + + S V W  MI AY                          
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177

Query: 352 ------VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
                 V+  + EEAL+LF EM  + +  D+ T AS+L A   L +L LGK LH ++ + 
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
               +V  G+AL+DMYAK GS++ A++ F+EMPE+++++W ALI   A  G     L+ F
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            +M  S  +PD+++ + VL+ACSH GL+ EG+ YFNSM  KY ++P  EHY  MVD+L R
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G   EAE L+  MP  PD  +   ++++CRIH NL  A++AA QL +++  ++   YV 
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDP-KNGGTYVL 416

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SNIY+    WE+  ++++ M ER ++K    S +E+   VH F   D  HPQ++EI   
Sbjct: 417 LSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYET 476

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           ++++M+ +K  GY PD S  L D DE+ K   L  HSE+LAIAF L++T  G+PI V+KN
Sbjct: 477 LDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKN 536

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C+DCH+A+K IS++  REI VRD +RFHHF  G CSCRDFW
Sbjct: 537 LRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 39/382 (10%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL-S 182
           L  AR VF ++P   + + N++I G+  + L  +AI  +  M   G  P  FTF +   S
Sbjct: 28  LPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS 87

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
            GV    +  G+Q+H    K  F  + ++ N L+++YS   C+V ARK+F +M     VS
Sbjct: 88  CGV----LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVS 143

Query: 243 YNVMITCYA-----------------------WN---------EQYKESLKLFRELQFTR 270
           +  MI  YA                       WN           Y+E+L LF E+Q + 
Sbjct: 144 WATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 203

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               +   ++LL    +   L++G+ +H          +V +  +LVDMYAKCG  E A 
Sbjct: 204 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 263

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
            +F  +     + WTA+I      G   +AL LF EM  + +  D  TF  +L A +   
Sbjct: 264 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 323

Query: 391 SLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
            ++ G    +S   + G   ++     ++DM  ++G + +A    + MP   +      L
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383

Query: 449 ISACAQNGDAQATLKSFEDMVQ 470
           +SAC  +G+     ++ + +++
Sbjct: 384 LSACRIHGNLVVAERAAQQLIE 405



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 170/386 (44%), Gaps = 41/386 (10%)

Query: 19  SGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFAT 78
           SG+L  AR +FN + + T  +   +I GY+ KN  R+A  LF  +    G DPD  TF +
Sbjct: 25  SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPS 83

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           L   C       E  Q+H    K G+ S   I N+L++ Y    CL  AR+VF +M  K 
Sbjct: 84  LFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 140

Query: 139 SVSFNALITGFAKEGLNEEAIKLFV--------------------------------EMQ 166
            VS+  +I  +A+  L  EAIKLF                                 EMQ
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200

Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
             G K    T A+ L A   L  + LG+ +H ++ K     +V +  AL+D+Y+K   + 
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            A ++F EMPE D +++  +I   A   Q  ++L+LF E+Q +        F  +L+  +
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320

Query: 287 NKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST-VPW 344
           +   +  G            I   ++    +VDM  + GR  EA+++  N+         
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 380

Query: 345 TAMISAYVQKGNL---EEALNLFIEM 367
             ++SA    GNL   E A    IE+
Sbjct: 381 VGLLSACRIHGNLVVAERAAQQLIEL 406



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 34/260 (13%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG- 68
           N L++ Y   G L +AR++F+ MV+++ VSW  +IG Y+Q +   EA KLF  M      
Sbjct: 114 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNL 173

Query: 69  -----------SDPDY-------------------VTFATLLSGCSEPDTANELIQVHAD 98
                       D DY                   VT A+LL  C+          +H  
Sbjct: 174 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 233

Query: 99  IIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
           I K      + +  +LVD Y K   ++ A RVF+EMP+KD +++ ALI G A  G   +A
Sbjct: 234 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 293

Query: 159 IKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVANALL 216
           ++LF EMQ    KP   TF   L+A    GL +  +    ++   K     ++     ++
Sbjct: 294 LELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA-YFNSMPNKYGIQPSIEHYGCMV 352

Query: 217 DLYSKHDCVVEARKLFGEMP 236
           D+  +   + EA  L   MP
Sbjct: 353 DMLGRAGRIAEAEDLIQNMP 372


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/560 (38%), Positives = 330/560 (58%), Gaps = 5/560 (0%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVV---EARKLFGEMPEVDGVSYNVMITCY 250
           +Q+ A+ +KTN   ++ V   L++  + +        A  LF ++ + D + +N+M   Y
Sbjct: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGY 105

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           A +     +  LF EL  +      + FS+LL   A+   L+ G  +H   +       +
Sbjct: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            +  +L++MYA+C     A+ +F  +     V + A+I+ Y +     EAL+LF E+  +
Sbjct: 166 YICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
           NI     T  S++ + A L +L LGK +H +V + GF   V   +AL+DM+AK GSL DA
Sbjct: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDA 285

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
           I  F+ M  R+  +W+A+I A A +GD    +  FE+M + G +PD ++ L +L ACSH 
Sbjct: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHA 345

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           GL+E+G  YF SM++ Y + P  +HY  MVD+L R+G  DEA   + ++  +   I+W +
Sbjct: 346 GLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRT 405

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++++C  H N+E AK+  +++F+++       YV +SN+YA  G+WE V+ ++K M++RG
Sbjct: 406 LLSACSTHGNVEMAKRVIERIFELDDAH-GGDYVILSNLYARVGRWEDVNHLRKLMKDRG 464

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH-DE 669
           V KV   S VE+ + VH F + D +H  + E+RR ++ LM+E+K  GY PDTS   H D 
Sbjct: 465 VVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADM 524

Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
           +EE K   L+YHSE+LA+AF L+NTP G+ I V KNLR C DCH A KLIS I GR+I +
Sbjct: 525 EEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVI 584

Query: 730 RDSSRFHHFKDGFCSCRDFW 749
           RD  RFH F+DG CSC DFW
Sbjct: 585 RDVQRFHRFEDGKCSCGDFW 604



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 198/399 (49%), Gaps = 10/399 (2%)

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR----CLDLARRVFKE 133
           +LLS C+   + NEL Q+ A  IK    S + +   L++ +C +      +D A  +F +
Sbjct: 34  SLLSKCT---SLNELKQIQAYTIKTNLQSDISVLTKLIN-FCTLNPTTSYMDHAHHLFDQ 89

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           +  KD + FN +  G+A+      A  LF E+   G  P D+TF++ L A      +  G
Sbjct: 90  ILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG 149

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
             +H F VK     N+++   L+++Y++ + +  AR +F EM +   VSYN +IT YA +
Sbjct: 150 MGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 209

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            Q  E+L LFRELQ +  + +     +++   A    L +G+ IH           VKV 
Sbjct: 210 SQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVN 269

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +L+DM+AKCG   +A  IF  +    T  W+AMI A+   G+  +A+++F EM R  + 
Sbjct: 270 TALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVR 329

Query: 374 ADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            D+ TF  +L A +    +  G+   +S     G    +     ++D+  ++G L +A  
Sbjct: 330 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYN 389

Query: 433 TFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
              ++  +   + W  L+SAC+ +G+ +   +  E + +
Sbjct: 390 FVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFE 428



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 171/339 (50%), Gaps = 5/339 (1%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           A  LF+ ++D+  + + I+  GY++ N    AF LF ++   G    DY TF++LL  C+
Sbjct: 83  AHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDY-TFSSLLKACA 141

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
                 E + +H   +K G N  + IC +L++ Y +   ++ AR VF EM Q   VS+NA
Sbjct: 142 SSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNA 201

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +ITG+A+     EA+ LF E+Q    +P+D T  + + +   L  + LG+ +H +V K  
Sbjct: 202 IITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKG 261

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
           F + V V  AL+D+++K   + +A  +F  M   D  +++ MI  +A +    +++ +F 
Sbjct: 262 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFE 321

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE-VKVANSLVDMYAKC 323
           E++       +  F  LL   ++   ++ GR        T  I+  +K    +VD+  + 
Sbjct: 322 EMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRA 381

Query: 324 GRFEEAKEIFANLSHISTVP--WTAMISAYVQKGNLEEA 360
           G  +EA   F +   I   P  W  ++SA    GN+E A
Sbjct: 382 GHLDEAYN-FVDKLEIKATPILWRTLLSACSTHGNVEMA 419



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  + K G+L  A  +F  M  R   +W+ +I  ++      +A  +F +M+ + G  P
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRE-GVRP 330

Query: 72  DYVTFATLLSGCSE 85
           D +TF  LL  CS 
Sbjct: 331 DEITFLGLLYACSH 344


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/558 (36%), Positives = 336/558 (60%), Gaps = 8/558 (1%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA V+K+    + F+ + L+ +Y K     +A++LF EMP  D VS+N +++  +    
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 256 YKESLKLFRELQFTRFDRSQFPFS-TLLSVVANKLD---LQIGRQIHTQTIVTTAISEVK 311
               L  F  +   R +  + P   TLLSVV+   D   L  G+ +H   +      + K
Sbjct: 144 LGACLNAFCRM---RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAK 200

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL++MY K G  + A ++F  +   S V W +M+  +   G  E+ ++LF  M RA 
Sbjct: 201 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 260

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ DQAT  ++LRA  +       + +H+++ R GF +++   +ALL++YAK G L  + 
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 320

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+E+ +R+ ++W A+++  A +   +  +K F+ MV+ G + D V+   +LSACSH G
Sbjct: 321 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 380

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG +YF  M++ Y++ P+ +HY+ MVD+L RSG  ++A +L+  MP EP   +W ++
Sbjct: 381 LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGAL 440

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR++ N+E  K+ A+QL  ++   D   Y+ +SNIY+ AG W   S+V+  M+ER +
Sbjct: 441 LGACRVYGNVELGKEVAEQLLSLDP-SDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            +    S++E  +K+H F   D+LHP+++EI  K+E L++++++ G  P T   LHD DE
Sbjct: 500 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDE 559

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E+KV+ +  HSE+LAIAF L+ T  G P+++ KNLR C DCH+  K  S +  R I +RD
Sbjct: 560 EVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRD 619

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S RFHHF DG CSCRD+W
Sbjct: 620 SKRFHHFADGLCSCRDYW 637



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 179/352 (50%), Gaps = 8/352 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G    A+ LF+ M ++  VSW  L+ G S +         F  MRT+ G  P
Sbjct: 103 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 162

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VT  +++S C++    +E   +H  ++K G +    + NSL++ Y K+  LD A ++F
Sbjct: 163 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 222

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +EMP +  VS+N+++      G  E+ + LF  M+  G  P   T  A L A     D  
Sbjct: 223 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA---CTDTG 279

Query: 192 LGRQ---VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           LGRQ   +HA++ +  F  ++ +A ALL+LY+K   +  +  +F E+ + D +++  M+ 
Sbjct: 280 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLA 339

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAI 307
            YA +   +E++KLF  +     +     F+ LLS  ++   ++ G++     + V    
Sbjct: 340 GYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVE 399

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             +   + +VD+  + GR E+A E+  ++    S+  W A++ A    GN+E
Sbjct: 400 PRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 451



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 21/377 (5%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA +IK    S   I + LV  Y K+   + A+R+F EMP KD VS+N+L++G +  G 
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 155 NEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               +  F  M+   G +P++ T  + +SA   +  +  G+ +H  VVK        V N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+++Y K   +  A +LF EMP    VS+N M+  +  N   ++ + LF  ++    + 
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 274 SQFPFSTLLSVVANKLDLQIGRQ---IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            Q   +T+++++    D  +GRQ   IH         +++ +A +L+++YAK GR   ++
Sbjct: 264 DQ---ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 320

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +IF  +     + WTAM++ Y       EA+ LF  M +  +  D  TF  +L A +   
Sbjct: 321 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 380

Query: 391 SLSLGKQLHSFVIRSGFMSNVF-------SGSALLDMYAKSGSLKDAIQTFKEMP-ERNI 442
            +  GK+          MS V+         S ++D+  +SG L+DA +  K MP E + 
Sbjct: 381 LVEEGKKYFE------IMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 434

Query: 443 VSWNALISACAQNGDAQ 459
             W AL+ AC   G+ +
Sbjct: 435 GVWGALLGACRVYGNVE 451



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 119/224 (53%), Gaps = 13/224 (5%)

Query: 366 EMCRANISADQATFA------SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
            +C AN+      F       S++ A +   S+S    +H+ VI+S   S+ F G  L+ 
Sbjct: 46  RICNANLFQLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVS 105

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSV 478
           MY K G  +DA + F EMP +++VSWN+L+S  +  G   A L +F  M  +SG QP+ V
Sbjct: 106 MYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 165

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           +LLSV+SAC+  G ++EG +  + +  K  +  K +   S++++  + G  D A +L  +
Sbjct: 166 TLLSVVSACADMGALDEG-KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEE 224

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           MP     + W+S++    IH +  +A+K  D LF + K     P
Sbjct: 225 MPVR-SLVSWNSMV---VIHNHNGYAEKGMD-LFNLMKRAGINP 263



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 2/229 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N LI+ Y K G L  A +LF  M  R+ VSW  ++  ++      +   LF  M+   G
Sbjct: 202 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AG 260

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +PD  T   LL  C++     +   +HA I + G+N+ +II  +L++ Y K+  L+ + 
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 320

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F+E+  +D +++ A++ G+A      EAIKLF  M   G +    TF   LSA     
Sbjct: 321 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 380

Query: 189 DIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +  G++    + +   VE  +   + ++DL  +   + +A +L   MP
Sbjct: 381 LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 429



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 42/237 (17%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N + +    L++ Y K G L  + ++F  + DR  ++WT ++ GY+     REA KLF D
Sbjct: 297 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF-D 355

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +    G + D+VTF  LLS CS           H+ +++ G                  +
Sbjct: 356 LMVKEGVEVDHVTFTHLLSACS-----------HSGLVEEGK-----------------K 387

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             ++   V++  P+ D   ++ ++    + G  E+A +L   M     +PS   + A L 
Sbjct: 388 YFEIMSEVYRVEPRLD--HYSCMVDLLGRSGRLEDAYELIKSMP---MEPSSGVWGALLG 442

Query: 183 AGVGLADIALGRQVHAFVVKTN--------FVENVFVANALLDLYSKHDCVVEARKL 231
           A     ++ LG++V   ++  +         + N++ A  L    SK   +++ R+L
Sbjct: 443 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/626 (35%), Positives = 362/626 (57%), Gaps = 3/626 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L+  Y   G L   + +F+ M++R  VSW  +IG +S    + EA  LF +M    G 
Sbjct: 46  NTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGF 105

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ V+  ++L  C+  +      Q+H  ++K G +S + + N+LVD Y K   +  +RR
Sbjct: 106 RPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRR 165

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF E+ +++ VS+NA+IT  A    N++A+++F  M   G KP+  TF++ L   V L  
Sbjct: 166 VFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKL 225

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              G+++H F ++     ++FVANAL+D+Y+K    ++A  +F ++ E + VS+N M+  
Sbjct: 226 FDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVAN 285

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           +A N     ++ L R++Q      +   F+ +L   A    L+ G++IH + I T +  +
Sbjct: 286 FAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVD 345

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
           + V+N+L DMYAKCG    A+ +F  +S    V +  +I  Y Q  N  E+L LF+EM  
Sbjct: 346 LFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGI 404

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D  ++  ++ A A LA+L  GK++H   +R    +++F  +ALLD Y K G +  
Sbjct: 405 KGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDL 464

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           A + F+++P R+  SWN++I      G+    +  FE M + G + DSVS ++VLSACSH
Sbjct: 465 AGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSH 524

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+EEG +YF  M Q   ++P + HYA MVD+L R+G  +EA KL+  +P EPD  +W 
Sbjct: 525 GGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWG 583

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           +++ +CRIH  +E A  AA+ LFK+ K + +  Y  +SN+YA AG+W+  +QV+K M+ R
Sbjct: 584 ALLGACRIHGYIELAHWAAEHLFKL-KPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSR 642

Query: 610 GVRKVTAYSWVELKSKVHVFTANDEL 635
           G +K    SWV++ ++VH F A + +
Sbjct: 643 GAKKNPGCSWVQIDNQVHAFVAGERM 668



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/486 (32%), Positives = 264/486 (54%), Gaps = 4/486 (0%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G   D  TF  +L  C++  +  +  ++H  + K G++S + + N+L+  Y     L   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVG 186
           +RVF EM ++D VS+N++I  F+  G   EAI LF EM    GF+P+  +  + L    G
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L D   GRQ+H +VVKT     V V NAL+D+Y K   V ++R++F E+ E +GVS+N +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT  A+ E+ +++L++FR +       +   FS++L V+        G++IH  ++    
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            S++ VAN+L+DMYAK GR  +A  +F  +   + V W AM++ + Q      A++L  +
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M       +  TF ++L A A +  L  GK++H+  IR+G   ++F  +AL DMYAK G 
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGC 361

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           L  A + FK +  R+ VS+N LI   +Q  +   +L+ F +M   G + D VS + V+SA
Sbjct: 362 LNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISA 420

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C++   +++G +      +K+ L        +++D   + G  D A K+  Q+P   D  
Sbjct: 421 CANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-SRDTA 478

Query: 547 MWSSVI 552
            W+S+I
Sbjct: 479 SWNSMI 484



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 196/386 (50%), Gaps = 36/386 (9%)

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
           +G +  D TF   L A      +  GR++H  V K  F  +VFV N LL  Y     + +
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVA 286
            +++F EM E D VS+N +I  ++ +  Y E++ LF E+   + F  +     ++L V A
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
              D   GRQIH   + T   S+V V N+LVD+Y KCG  ++++ +F  +S  + V W A
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 347 MIS--AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           +I+  AY+++   ++AL +F  M    +  +  TF+S+L    EL     GK++H F +R
Sbjct: 181 IITSLAYLERN--QDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
            G  S++F  +AL+DMYAKSG    A   F ++ E+NIVSWNA+++  AQN    A +  
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA------- 517
              M   G  P+SV+  +VL AC+  G                 LRP KE +A       
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGF----------------LRPGKEIHARAIRTGS 342

Query: 518 --------SMVDILCRSGCFDEAEKL 535
                   ++ D+  + GC + A ++
Sbjct: 343 SVDLFVSNALTDMYAKCGCLNLARRV 368



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 105/187 (56%), Gaps = 7/187 (3%)

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D  TF  +L+A A+  S+  G+++H  V + GF S+VF G+ LL  Y   G LKD 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSH 489
            + F EM ER++VSWN++I   + +G     +  F +M ++SG++P+ VS++SVL  C+ 
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 490 CGLIEEGL--QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
              +E+G+  +  +    K  L  +     ++VD+  + G   ++ ++  ++  E + + 
Sbjct: 122 ---LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS-ERNGVS 177

Query: 548 WSSVINS 554
           W+++I S
Sbjct: 178 WNAIITS 184


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/613 (35%), Positives = 334/613 (54%), Gaps = 36/613 (5%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
           P   ++A       GL  + LG QVHA ++         V + ++  Y+    +  +  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
           F  + E   + +N MI  YA     + ++  +  +    F    F F  +L      L +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS--HIST-------- 341
            +G+ +H   +      ++ VA SL+ +Y KCG   +A ++F N++   +S+        
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247

Query: 342 ---------------------VPWTAMISAYVQKGNLEEALNLFIEMCR--ANISADQAT 378
                                V WT MIS Y Q G  ++AL+LF EM +  + +  +  T
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307

Query: 379 FASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
             S+L A A+L++L  G+Q+H    R G  SN     AL  MYAK GSL DA   F ++ 
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLN 367

Query: 439 --ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
             E+N+++WN +I+A A  G     + +F +M+Q+G QPD ++   +LS CSH GL++ G
Sbjct: 368 RNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG 427

Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
           L+YFN M+  Y + P+ EHYA + D+L R+G   EA KL+ +MP      +W S++ +CR
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487

Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
            H+NLE A+ AA +LF +E   +   YV +SN+YA AG+W+ V +++  ++ +G +K   
Sbjct: 488 KHRNLEMAETAARKLFVLEP-ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPG 546

Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
            SW+E+  K H+F   D  HPQ  EI   +E L ++MK  GY PDTS  LHD  EE K  
Sbjct: 547 CSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEF 606

Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
           +L  HSE+LA+AF ++NTP  + + V KNLR C DCH A+  IS+I GRE+ VRD +RFH
Sbjct: 607 NLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFH 666

Query: 737 HFKDGFCSCRDFW 749
           HFK G CSC D+W
Sbjct: 667 HFKGGCCSCGDYW 679



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 180/401 (44%), Gaps = 41/401 (10%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           QVHA ++  G     ++ + +V  Y     +D +  VF  + +  S+ FN++I  +A+ G
Sbjct: 91  QVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYG 150

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
             E  +  +  M   GF    FTF   L + V L  + +G+ VH  +++     +++VA 
Sbjct: 151 FAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVAT 210

Query: 214 ALLDL-------------------------------YSKHDCVVEARKLFGEMPEVDGVS 242
           +L+ L                               Y+K  C+  A  +F  MP  + VS
Sbjct: 211 SLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVS 270

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVV---ANKLDLQIGRQIH 298
           +  MI+ Y+ +   +++L LF E+   + D    P + T++SV+   A    L+ GRQIH
Sbjct: 271 WTTMISGYSQSGLAQQALSLFDEM--VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKGN 356
                    S   V  +L  MYAKCG   +A+  F   N +  + + W  MI+AY   G+
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGS 415
             +A++ F EM +A I  D  TF  +L   +    + +G K  +           V   +
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQN 455
            + D+  ++G L +A +   EMP     S W +L++AC ++
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 489



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 10/249 (4%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++  S N L++GY KSG +  A  +F  M  R  VSWT +I GYSQ    ++A  LF
Sbjct: 232 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 291

Query: 61  VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
            +M + D G  P++VT  ++L  C++  T     Q+H    + G NS   +  +L   Y 
Sbjct: 292 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 351

Query: 120 KIRCLDLARRVFKEM--PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
           K   L  AR  F ++   +K+ +++N +IT +A  G   +A+  F EM   G +P D TF
Sbjct: 352 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 411

Query: 178 AAALS--AGVGLADIALGRQVHAFVVKTNFVENVFVAN--ALLDLYSKHDCVVEARKLFG 233
              LS  +  GL D+ L    H   + T +  N  V +   + DL  +   + EA KL G
Sbjct: 412 TGLLSGCSHSGLVDVGLKYFNH---MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG 468

Query: 234 EMPEVDGVS 242
           EMP   G S
Sbjct: 469 EMPMPAGPS 477



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 179/387 (46%), Gaps = 40/387 (10%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           +++ Y  SG++ ++  +FN + + +++ +  +I  Y++          +  M + G +  
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTG- 169

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGY-------NSILII---C---------- 111
           DY TF  +L    E  +      VH  I++ G         S++I+   C          
Sbjct: 170 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 229

Query: 112 -----------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
                      N+L+  Y K  C+D A  +F+ MP ++ VS+  +I+G+++ GL ++A+ 
Sbjct: 230 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289

Query: 161 LFVEM--QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDL 218
           LF EM  +  G +P+  T  + L A   L+ +  GRQ+H    +     N  V  AL  +
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349

Query: 219 YSKHDCVVEARKLFGEM--PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
           Y+K   +V+AR  F ++   E + +++N MIT YA      +++  FRE+          
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFAN 335
            F+ LLS  ++   + +G +       T +I+  V+    + D+  + GR  EA ++   
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 469

Query: 336 LSHISTVP--WTAMISAYVQKGNLEEA 360
           +  +   P  W ++++A  +  NLE A
Sbjct: 470 MP-MPAGPSIWGSLLAACRKHRNLEMA 495


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 229/648 (35%), Positives = 363/648 (56%), Gaps = 38/648 (5%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  VF+ +P+ + + +N +  G A       A+KL+V M  LG  P+ FTF   L +
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                    G+Q+H  V+K  F  +++V  +L+ +Y+++  + +A+K+F      D VSY
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 244 NVMITCYA----------------------WNE---------QYKESLKLFRELQFTRFD 272
             +IT YA                      WN           YK++L+LF+E+  T   
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             +   +T++S  A    +++GRQ+H+        S +K+ N+L+D+Y+KCG  E A E+
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
              LS+   + W  +I  Y      +EAL LF EM R+  + +  T  SIL A A L ++
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 393 SLGKQLHSFV---IRSGFMSNVFS-GSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNA 447
            +G+ +H ++   ++   ++N  S  ++L+DMYAK G +  A Q        R++ +WNA
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           +I   A +G A A    F  M ++G +PD ++ + +LSACSH G+++ G   F SM Q Y
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444

Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
            + PK EHY  M+D+L  SG F EAE+++  MP EPD ++W S++ +C+IH NLE  +  
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504

Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV-RKVTAYSWVELKSKV 626
           A +L K+E   +   YV +SNIYA AG+W  V +++  + ++G+ +KV   S +E+ S V
Sbjct: 505 AKKLIKIEP-ENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVV 563

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
           H F   D+LHPQ  EI   +E +   +++ G+ PDTS  L + +EE K  +L++HSE+LA
Sbjct: 564 HEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 623

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSR 734
           IAF LI+T  G+ + ++KNLR C +CH A KLISKI  REI  RD +R
Sbjct: 624 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 228/479 (47%), Gaps = 43/479 (8%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
            L  A  +F ++ +   + W I+  G++  +    A KL+V M    G  P++ TF  LL
Sbjct: 24  GLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM-ISLGLLPNFFTFPFLL 82

Query: 81  SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
             C++  T  E  Q+H  ++K G++  L +  SL+  Y +   L+ A++VF         
Sbjct: 83  KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142

Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
                                  E+P KD VS+NA+I+G+A+ G  ++A++LF EM    
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202

Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
            KP + T A  +SA      I LGRQVH+++    F  N+ + NAL+DLYSK   V  A 
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262

Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
           +L   +   D +S+N +I  Y     YKE+L LF+E+  +    +     ++L   A+  
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322

Query: 290 DLQIGRQIHT------QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF-ANLSHISTV 342
            + IGR IH       + +V T  S ++   SL+DMYAKCG  + A ++  ++  + S  
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRT--SLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSF 401
            W AMI  +   G    A ++F  M +  I  D  TF  +L A +    L LG+ +  S 
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 440

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
                    +     ++D+   SG  K+A +    MP E + V W +L+ AC  +G+ +
Sbjct: 441 RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 499


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/584 (38%), Positives = 342/584 (58%), Gaps = 7/584 (1%)

Query: 172 PSDFT---FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           PS +    +A  L + V    +  GRQ+HA ++ +    +  +A  L+DLY+    V  A
Sbjct: 63  PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122

Query: 229 RKLFGEMPEVDGV-SYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVA 286
           R++F EMP    V  +NV+I  YA +   + +++L+R  L +       F +  +L   A
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
             LDL  GR++H + + T   ++V V   L+DMYAKCG  +EA  +F + +      W +
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MI+A  Q G   EAL L   M    I+   AT  S + A+A  ++L  G++LH +  R G
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           F S     ++LLDMYAKSG +  A   F+++  R ++SWNA+I     +G A    + F 
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 467 DM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
            M  ++   PD ++ + VLSAC+H G+++E  + F+ M   Y ++P  +HY  +VD+L  
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           SG F EA  ++  M  +PD  +W +++N C+IHKN+E A+ A  +L ++E   DA  YV 
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEP-EDAGNYVL 481

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SNIYA +G+WE  ++V+K M  RG++K+ A SW+ELK K H F   D  HP++++I  +
Sbjct: 482 LSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEE 541

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +E L   + + GY PDT+   H+ +++ K   +  HSERLAIAF LI+TP  + +LV KN
Sbjct: 542 LERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKN 601

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCH  IKLIS+I  REI +RD +R+HHF +G CSC+D W
Sbjct: 602 LRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 191/406 (47%), Gaps = 9/406 (2%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           ++  +AT+L  C          Q+HA ++  G     ++   LVD Y     + LARRVF
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 132 KEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLAD 189
            EMP + +V  +N LI  +A++G  E AI+L+  M   G  KP +FT+   L A   L D
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           ++ GR+VH  V++TN+  +VFV   L+D+Y+K  C+ EA  +F +    D   +N MI  
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              N +  E+L L R +       +     + +S  A    L  GR++H         S+
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-C 368
            K+  SL+DMYAK G    A  +F  L H   + W AMI  +   G+ + A  LF  M  
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSL 427
            A +  D  TF  +L A      +   K++   ++        V   + L+D+   SG  
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 428 KDAIQTFKEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           K+A    K M   P+  I  W AL++ C  + + +    + + +++
Sbjct: 427 KEASDVIKGMLVKPDSGI--WGALLNGCKIHKNVELAELALQKLIE 470



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 62/500 (12%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDM 63
           + V    L+  Y   G+++ AR +F+ M ++  V  W +LI  Y++      A +L+  M
Sbjct: 102 DAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAM 161

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
              G   PD  T+  +L  C+     +   +VH  +++  + + + +C  L+D Y K  C
Sbjct: 162 LAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGC 221

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           +D A  VF +   +D+  +N++I    + G   EA+ L   M   G  P+  T  +A+SA
Sbjct: 222 MDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISA 281

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
               + +  GR++H +  +  F     +  +LLD+Y+K   V+ A  LF ++   + +S+
Sbjct: 282 AAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISW 341

Query: 244 NVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           N MI  +  +     + +LF  ++   +       F  +LS   +   +Q  +++    +
Sbjct: 342 NAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMV 401

Query: 303 VTTAISE-VKVANSLVDMYAKCGRFEEAKEIFAN-LSHISTVPWTAMISAYVQKGNLEEA 360
              +I   V+    LVD+    GRF+EA ++    L    +  W A+++           
Sbjct: 402 TVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNG---------- 451

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG---FMSNVFSGSAL 417
                  C+             +  + ELA L+L K +      +G    +SN+      
Sbjct: 452 -------CK-------------IHKNVELAELALQKLIELEPEDAGNYVLLSNI------ 485

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNI-----VSWNALI----------SACAQNGDAQATL 462
              YA+SG  ++A +  K M  R +      SW  L           ++  ++ D    L
Sbjct: 486 ---YAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEEL 542

Query: 463 KSFEDMV-QSGYQPDSVSLL 481
           +  E ++ Q+GY PD+  + 
Sbjct: 543 ERLEGLISQTGYVPDTTPVF 562


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/630 (34%), Positives = 355/630 (56%), Gaps = 39/630 (6%)

Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSA----GVGLADIALGRQVHAFVVKTNFVENVFV 211
           E+A+  +  M   G +P  +TF A L A      G    A  R VHA VV+     N  V
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           A++L+  Y+       AR L GE      V++N +I+ +    ++ ES   F ++     
Sbjct: 61  ASSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 272 DRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC------- 323
             +   + ++LS       D+ +G Q+H + + +  + +++V N+LVDMYA+C       
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178

Query: 324 ------------------------GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
                                   G+ +EA+++F  +    TV WTAMI  YV      E
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           AL +F EM  +N+SAD+ T  S++ A A+L +L +G+ +  ++ R G   + F G+AL+D
Sbjct: 239 ALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALID 298

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           MY+K GS++ A+  FK M  R+  +W A+I   A NG  +  ++ F  M++    PD V+
Sbjct: 299 MYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVT 358

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            + VL+AC+H GL+++G ++F SM + Y + P   HY  ++D+L R+G   EA   + QM
Sbjct: 359 FIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQM 418

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           P  P+  +W +++ +CR+H N E  +  A++L +++   ++  Y+ +SNIYA   +WE V
Sbjct: 419 PMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDP-ENSMVYILLSNIYAKCNRWEDV 477

Query: 600 SQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYK 659
            +++ A+ E+G++K    S +E+   +H F A D+ HP + EI  K+E+++ ++   GY 
Sbjct: 478 RRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYF 537

Query: 660 PDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
           PD +    +  E+ K + L +HSE+LAIAFAL+++   + I ++KNLR C DCH AIKLI
Sbjct: 538 PDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLI 597

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S++ GRE+ VRD +RFHHF+ GFCSC+D+W
Sbjct: 598 SRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 205/437 (46%), Gaps = 54/437 (12%)

Query: 68  GSDPDYVTFATLL---------SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
           G  PD  TF  LL         SG + P  A     VHA +++ G      + +SLV +Y
Sbjct: 14  GGRPDAYTFPALLKAVARAAGGSGSAAPARA-----VHAHVVRLGMGRNAHVASSLVAAY 68

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
                   AR +  E      V++NALI+G  + G   E+   FV+M   G  P+  T+ 
Sbjct: 69  TAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYV 126

Query: 179 AALSA-GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC------------- 224
           + LSA G G  D+ LG QVH  VV +  + ++ V NAL+D+Y+  +C             
Sbjct: 127 SVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYA--ECADMGSAWKVFDGM 184

Query: 225 --------------------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
                               V EAR LF  MPE D VS+  MI  Y W  +++E+L++FR
Sbjct: 185 QVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFR 244

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
           E+Q++     +F   ++++  A    L++G  +           +  V N+L+DMY+KCG
Sbjct: 245 EMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCG 304

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E A ++F  + H     WTA+I      G  EEA+ +F  M R + + D+ TF  +L 
Sbjct: 305 SIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLT 364

Query: 385 ASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNI 442
           A      +  G++    +I +     NV     ++D+  ++G + +A+ T  +MP   N 
Sbjct: 365 ACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNS 424

Query: 443 VSWNALISACAQNGDAQ 459
             W  L++AC  +G+++
Sbjct: 425 TIWGTLLAACRVHGNSE 441



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 37/358 (10%)

Query: 36  TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELI-- 93
           T V+W  LI G+++  +F E+   FVDM    G+ P  VT+ ++LS C +  T + L+  
Sbjct: 86  TPVAWNALISGHNRGGRFGESCGSFVDM-ARAGAAPTPVTYVSVLSACGK-GTRDVLLGM 143

Query: 94  QVHADIIKFGYNSILIICNSLVDSYC-------------------------------KIR 122
           QVH  ++  G    L + N+LVD Y                                ++ 
Sbjct: 144 QVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLG 203

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR +F  MP++D+VS+ A+I G+       EA+++F EMQ+      +FT  + ++
Sbjct: 204 QVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVIT 263

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  + +G  V  ++ +     + FV NAL+D+YSK   +  A  +F  M   D  +
Sbjct: 264 ACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFT 323

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I   A N   +E++++F  +        +  F  +L+   +   +  GR+     I
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLE 358
               I+  V     ++D+  + G+  EA +    +    ++  W  +++A    GN E
Sbjct: 384 EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 47/338 (13%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   L+SG  + G +  AR+LF+ M +R  VSWT +I GY    +FREA ++F
Sbjct: 184 MQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMF 243

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+    S  D  T  ++++ C++         V   + + G      + N+L+D Y K
Sbjct: 244 REMQYSNVS-ADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 302

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A  VFK M  +D  ++ A+I G A  G  EEAI++F  M  +   P + TF   
Sbjct: 303 CGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGV 362

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L+A      +  GR+    +++  N   NV     ++DL  +   + EA     +MP   
Sbjct: 363 LTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMP--- 419

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            ++ N  I                              + TLL+      + +IG     
Sbjct: 420 -MTPNSTI------------------------------WGTLLAACRVHGNSEIGE---- 444

Query: 300 QTIVTTAISEVKVANSLV-----DMYAKCGRFEEAKEI 332
             +V   + E+   NS+V     ++YAKC R+E+ + +
Sbjct: 445 --LVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRL 480


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/558 (36%), Positives = 336/558 (60%), Gaps = 8/558 (1%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA V+K+    + F+ + L+ +Y K     +A++LF EMP  D VS+N +++  +    
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 256 YKESLKLFRELQFTRFDRSQFPFS-TLLSVVANKLD---LQIGRQIHTQTIVTTAISEVK 311
               L  F  +   R +  + P   TLLSVV+   D   L  G+ +H   +      + K
Sbjct: 201 LGACLNAFCRM---RTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAK 257

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL++MY K G  + A ++F  +   S V W +M+  +   G  E+ ++LF  M RA 
Sbjct: 258 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 317

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I+ DQAT  ++LRA  +       + +H+++ R GF +++   +ALL++YAK G L  + 
Sbjct: 318 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 377

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+E+ +R+ ++W A+++  A +   +  +K F+ MV+ G + D V+   +LSACSH G
Sbjct: 378 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 437

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+EEG +YF  M++ Y++ P+ +HY+ MVD+L RSG  ++A +L+  MP EP   +W ++
Sbjct: 438 LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGAL 497

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR++ N+E  K+ A+QL  ++   D   Y+ +SNIY+ AG W   S+V+  M+ER +
Sbjct: 498 LGACRVYGNVELGKEVAEQLLSLDP-SDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 556

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
            +    S++E  +K+H F   D+LHP+++EI  K+E L++++++ G  P T   LHD DE
Sbjct: 557 TRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDE 616

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E+KV+ +  HSE+LAIAF L+ T  G P+++ KNLR C DCH+  K  S +  R I +RD
Sbjct: 617 EVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRD 676

Query: 732 SSRFHHFKDGFCSCRDFW 749
           S RFHHF DG CSCRD+W
Sbjct: 677 SKRFHHFADGLCSCRDYW 694



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 179/352 (50%), Gaps = 8/352 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G    A+ LF+ M ++  VSW  L+ G S +         F  MRT+ G  P
Sbjct: 160 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 219

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VT  +++S C++    +E   +H  ++K G +    + NSL++ Y K+  LD A ++F
Sbjct: 220 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 279

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +EMP +  VS+N+++      G  E+ + LF  M+  G  P   T  A L A     D  
Sbjct: 280 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA---CTDTG 336

Query: 192 LGRQ---VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           LGRQ   +HA++ +  F  ++ +A ALL+LY+K   +  +  +F E+ + D +++  M+ 
Sbjct: 337 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLA 396

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAI 307
            YA +   +E++KLF  +     +     F+ LLS  ++   ++ G++     + V    
Sbjct: 397 GYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVE 456

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             +   + +VD+  + GR E+A E+  ++    S+  W A++ A    GN+E
Sbjct: 457 PRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 508



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 21/377 (5%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA +IK    S   I + LV  Y K+   + A+R+F EMP KD VS+N+L++G +  G 
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 155 NEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               +  F  M+   G +P++ T  + +SA   +  +  G+ +H  VVK        V N
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+++Y K   +  A +LF EMP    VS+N M+  +  N   ++ + LF  ++    + 
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 274 SQFPFSTLLSVVANKLDLQIGRQ---IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            Q   +T+++++    D  +GRQ   IH         +++ +A +L+++YAK GR   ++
Sbjct: 321 DQ---ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 377

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +IF  +     + WTAM++ Y       EA+ LF  M +  +  D  TF  +L A +   
Sbjct: 378 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 437

Query: 391 SLSLGKQLHSFVIRSGFMSNVFS-------GSALLDMYAKSGSLKDAIQTFKEMP-ERNI 442
            +  GK+          MS V+         S ++D+  +SG L+DA +  K MP E + 
Sbjct: 438 LVEEGKKYFE------IMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 491

Query: 443 VSWNALISACAQNGDAQ 459
             W AL+ AC   G+ +
Sbjct: 492 GVWGALLGACRVYGNVE 508



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 113/203 (55%), Gaps = 7/203 (3%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           S++ A +   S+S    +H+ VI+S   S+ F G  L+ MY K G  +DA + F EMP +
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++VSWN+L+S  +  G   A L +F  M  +SG QP+ V+LLSV+SAC+  G ++EG + 
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG-KS 242

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            + +  K  +  K +   S++++  + G  D A +L  +MP     + W+S++    IH 
Sbjct: 243 LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMV---VIHN 298

Query: 560 NLEFAKKAADQLFKMEKLRDAAP 582
           +  +A+K  D LF + K     P
Sbjct: 299 HNGYAEKGMD-LFNLMKRAGINP 320



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 2/229 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N LI+ Y K G L  A +LF  M  R+ VSW  ++  ++      +   LF  M+   G
Sbjct: 259 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AG 317

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +PD  T   LL  C++     +   +HA I + G+N+ +II  +L++ Y K+  L+ + 
Sbjct: 318 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 377

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F+E+  +D +++ A++ G+A      EAIKLF  M   G +    TF   LSA     
Sbjct: 378 DIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 437

Query: 189 DIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +  G++    + +   VE  +   + ++DL  +   + +A +L   MP
Sbjct: 438 LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 486



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 42/237 (17%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N + +    L++ Y K G L  + ++F  + DR  ++WT ++ GY+     REA KLF D
Sbjct: 354 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF-D 412

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +    G + D+VTF  LLS CS           H+ +++ G                  +
Sbjct: 413 LMVKEGVEVDHVTFTHLLSACS-----------HSGLVEEGK-----------------K 444

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             ++   V++  P+ D   ++ ++    + G  E+A +L   M     +PS   + A L 
Sbjct: 445 YFEIMSEVYRVEPRLD--HYSCMVDLLGRSGRLEDAYELIKSMP---MEPSSGVWGALLG 499

Query: 183 AGVGLADIALGRQVHAFVVKTN--------FVENVFVANALLDLYSKHDCVVEARKL 231
           A     ++ LG++V   ++  +         + N++ A  L    SK   +++ R+L
Sbjct: 500 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 556


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/557 (35%), Positives = 334/557 (59%), Gaps = 1/557 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR++H ++         F++N L+D+Y K   +VEA+++F  M   +  S+ +++  +  
Sbjct: 60  GRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQ 119

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           + +  E+++LF  +        +      +        L  GR+IH+        S++  
Sbjct: 120 SGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVT 179

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           AN++++MY KCG   EA  +F  +   + + W+ MI+A+ Q    +EAL  F  M +  +
Sbjct: 180 ANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGM 239

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D+ T+ S+L A   + +L LGK LH  ++ +G  +++  G+ L++MY K GS  DA  
Sbjct: 240 ELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARD 299

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F  M E+N+VSWNA+++A  QNG ++  L  F+ M   G +P+ ++ +++L  CSH G 
Sbjct: 300 VFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGK 359

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            ++ + +F  M Q + + P++ H+  ++D+L RSG  +EAE+L+  MP   D ++W+S++
Sbjct: 360 FKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            +C  HK+ + A +AA++ F+ E  R AA Y+ +SN+YA   +W+  ++V+K M + GVR
Sbjct: 420 CACVTHKDEDRAARAAEEAFQREP-RCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVR 478

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           K    SW+E+  +VH F A D +HP  + I + ++ LM EM+ +GY+PD    +H  +EE
Sbjct: 479 KQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEE 538

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
            K E L YHSE+LA+AF + +TP  +P+ ++KNLR C+DCH+AIK IS + GR ITVRDS
Sbjct: 539 EKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDS 598

Query: 733 SRFHHFKDGFCSCRDFW 749
           +RFHHF  G CSC D+W
Sbjct: 599 NRFHHFDRGECSCGDYW 615



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 195/426 (45%), Gaps = 10/426 (2%)

Query: 31  SMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTAN 90
           S V R    W   +      +  REA  L       GG+         L+  C+      
Sbjct: 3   SSVRRAITKWLSPVLECGGVDAIREAVDLLEQSGAAGGTG----DLEQLIRRCAGAKALE 58

Query: 91  ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
           E  ++H  +     +    + N LVD Y K   L  A+RVF  M  K+  S+  L+ GF 
Sbjct: 59  EGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFV 118

Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
           + G   EAI+LF  M   G  P        + +      ++ GR++H+         ++ 
Sbjct: 119 QSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLV 178

Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
            ANA++++Y K   + EA  +F  MPE + +S++ MI  +  NE   E+L  F+ +Q   
Sbjct: 179 TANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEG 238

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            +  +  + ++L    +   L++G+ +H + +     + + V N+LV+MY KCG  ++A+
Sbjct: 239 MELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDAR 298

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           ++F ++   + V W AM++AY Q G   EAL LF  M    +  +  TF +IL   +   
Sbjct: 299 DVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSH-- 356

Query: 391 SLSLGKQLHSFV-IRS--GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWN 446
           S      +  FV +R   G          L+DM  +SG L++A +  + MP   + V W 
Sbjct: 357 SGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWT 416

Query: 447 ALISAC 452
           +L+ AC
Sbjct: 417 SLLCAC 422



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 193/424 (45%), Gaps = 36/424 (8%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N+L+  Y K G+L  A+ +F++M  +   SWT+L+ G+ Q  +  EA +LF  M  + G
Sbjct: 79  SNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQE-G 137

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD V     +  C      ++  ++H+     G +S L+  N++++ Y K   +  A 
Sbjct: 138 ELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAF 197

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF  MP+K+ +S++ +I  F +  L +EA+  F  MQ  G +    T+ + L A   + 
Sbjct: 198 AVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVG 257

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LG+ +H  +V      ++ V N L+++Y K     +AR +F  M E + VS+N M+ 
Sbjct: 258 ALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLA 317

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTA 306
            Y  N + +E+L LF  +       +   F T+L   ++  K    +   +  +      
Sbjct: 318 AYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGIT 377

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMI----------------- 348
             EV     L+DM  + G+ EEA+E+   +      V WT+++                 
Sbjct: 378 PREVHFG-CLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAE 436

Query: 349 ----------SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
                     +AY+   NL  AL  + E  +     +QA     +R  A  + + + KQ+
Sbjct: 437 EAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAG----VRKQAGRSWIEIDKQV 492

Query: 399 HSFV 402
           H FV
Sbjct: 493 HEFV 496



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 49/262 (18%)

Query: 345 TAMISAYVQKGNLE---EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSF 401
           T  +S  ++ G ++   EA++L  +   A  + D      ++R  A   +L  G+++H +
Sbjct: 10  TKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRIHRW 66

Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
           +         F  + L+DMY K GSL +A + F  M  +N+ SW  L++   Q+G     
Sbjct: 67  MDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEA 126

Query: 462 LKSFEDMVQSGYQPDSVSLLSVLSAC---------------------------------- 487
           ++ F  M Q G  PD V+LL  + +C                                  
Sbjct: 127 IQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINM 186

Query: 488 -SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE---KLMAQMPFEP 543
              CG I E    F  M +K  +      +++M+   C++   DEA    KLM Q   E 
Sbjct: 187 YGKCGSIGEAFAVFTRMPEKNVI-----SWSTMIAAFCQNELADEALLFFKLMQQEGMEL 241

Query: 544 DEIMWSSVINSCRIHKNLEFAK 565
           D I + SV+++      LE  K
Sbjct: 242 DRITYVSVLDAYTSVGALELGK 263


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/584 (36%), Positives = 333/584 (57%), Gaps = 14/584 (2%)

Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFV-----VKTNFVENVFVANALLDLYSKHDCVV 226
           P   T    L    G AD   GR +H  V     +  +    +FV+N+L  +Y+K   + 
Sbjct: 64  PVSLTRLVKLCVRHGTAD--HGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLD 121

Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVV 285
           +A ++F  MP  + V++  ++   A  +  K E+L+    ++      + + FS++L   
Sbjct: 122 DALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGAC 181

Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
                L     +H  T+     S+V V +SL+D Y K G  +  + +F  +     V W 
Sbjct: 182 TTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWN 238

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
           ++I+ + Q G+   A+ LF+ M  A  S++Q T  S+LRA   +  L  G+Q+H+ V++ 
Sbjct: 239 SIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK- 297

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
            +  ++   +ALLDMY K GSL+DA   F  MP+R+++SW+ ++S  AQNG +   L+ F
Sbjct: 298 -YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVF 356

Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
           + M   G  P+ V+++ VL ACSH GL+E+G  YF SM + + ++P++EH+  MVD+L R
Sbjct: 357 DLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGR 416

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
           +G  DEA + +  M  EPD ++W +++ +CR+HKN   A  AA ++ K+E   D    V 
Sbjct: 417 AGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEP-DDQGARVL 475

Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
           +SN YA   QW    +  KAMR+RG+RK    SW+EL+ +VHVF A D  HP ++ I ++
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKN 705
           +  L+  +K  GY P T   L D   E K + LKYHSE++AI F  ++  +G PI +MKN
Sbjct: 536 LNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKN 595

Query: 706 LRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LR C DCHA  KL+SK  GR I +RD  RFHHF+DG CSC D+W
Sbjct: 596 LRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 181/345 (52%), Gaps = 9/345 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGY-SQKNQFREAFKLFVDMRTDG 67
           +N L S Y K G L  A  +F+ M  R  V+WT ++    S   + +EA +  V MR DG
Sbjct: 107 SNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDG 166

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
            + P+  TF+++L  C+ P     L  VHA  +K G +S + + +SL+D+Y K+  LD  
Sbjct: 167 VA-PNAYTFSSVLGACTTP---GMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGG 222

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           RRVF EM  +D V +N++I GFA+ G    AI+LF+ M+  GF  +  T  + L A  G+
Sbjct: 223 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGM 282

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             +  GRQVHA V+K  +  ++ + NALLD+Y K   + +A  LF  MP+ D +S++ M+
Sbjct: 283 VMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMV 340

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           +  A N +  E+L++F  ++      +      +L   ++   ++ G            I
Sbjct: 341 SGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGI 400

Query: 308 -SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             E +  N +VD+  + G+ +EA E    +S    +V W  ++ A
Sbjct: 401 QPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGA 445



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 195/423 (46%), Gaps = 17/423 (4%)

Query: 72  DYVTFATLLSGCSEPDTANE------LIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D V+   L+  C    TA+        ++ H  +   G    L + NSL   Y K   LD
Sbjct: 63  DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGG-LFVSNSLASMYAKFGLLD 121

Query: 126 LARRVFKEMPQKDSVSFNALITGFAK-EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
            A R+F  MP ++ V++  ++   A  +G  +EA++  V M+  G  P+ +TF++ L A 
Sbjct: 122 DALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA- 180

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
                  +   VHA  VK     +VFV ++L+D Y K   +   R++F EM   D V +N
Sbjct: 181 --CTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWN 238

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
            +I  +A +     +++LF  ++   F  +Q   +++L      + L+ GRQ+H    V 
Sbjct: 239 SIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAH--VL 296

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               ++ + N+L+DMY KCG  E+A  +F  +     + W+ M+S   Q G   EAL +F
Sbjct: 297 KYDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVF 356

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAK 423
             M    ++ +  T   +L A +    +  G      + R  G        + ++D+  +
Sbjct: 357 DLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGR 416

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           +G L +A++    M  E + V W  L+ AC  + +A     +  ++++   +PD      
Sbjct: 417 AGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILK--LEPDDQGARV 474

Query: 483 VLS 485
           +LS
Sbjct: 475 LLS 477



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 34/181 (18%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++ +  N L+  Y K G+L  A  LF+ M  R  +SW+ ++ G +Q  +  EA ++F D
Sbjct: 299 DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVF-D 357

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +    G  P++VT   +L  CS           HA +++ G++    +            
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACS-----------HAGLVEDGWHYFRSM------------ 394

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
                +R+F   P+++    N ++    + G  +EA++    M     +P    +   L 
Sbjct: 395 -----KRLFGIQPERE--HHNCMVDLLGRAGKLDEAVEFIHGMS---LEPDSVIWRTLLG 444

Query: 183 A 183
           A
Sbjct: 445 A 445


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/788 (29%), Positives = 403/788 (51%), Gaps = 76/788 (9%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + N +T   +  +  Y +  +L  A +LF+ M  R  ++W  ++    +   + +A +LF
Sbjct: 18  LDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELF 77

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+  G    D  T   LL  CS  +   E  Q+H  +++ G  S + +CNSL+  Y +
Sbjct: 78  REMQFSGAKAYD-STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSR 136

Query: 121 IRCLDLARRVFKEMPQK-----------------------------------DSVSFNAL 145
              L+L+R+VF  M  +                                   D V++N+L
Sbjct: 137 NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL 196

Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
           ++G+A +GL+++AI +   MQ  G KPS  + ++ L A      + LG+ +H ++++   
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256

Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
             +V+V   L+D+Y K   +  AR +F  M   + V++N +++  ++    K++  L   
Sbjct: 257 WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR 316

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           ++                                + I   AI+     NSL   YA  G+
Sbjct: 317 ME-------------------------------KEGIKPDAIT----WNSLASGYATLGK 341

Query: 326 FEEAKEIFANLSHISTVP----WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
            E+A ++   +      P    WTA+ S   + GN   AL +FI+M    +  + AT ++
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           +L+    L+ L  GK++H F +R   + + +  +AL+DMY KSG L+ AI+ F  +  ++
Sbjct: 402 LLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKS 461

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           + SWN ++   A  G  +  + +F  M+++G +PD+++  SVLS C + GL++EG +YF+
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD 521

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNL 561
            M  +Y + P  EH + MVD+L RSG  DEA   +  M  +PD  +W + ++SC+IH++L
Sbjct: 522 LMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDL 581

Query: 562 EFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVE 621
           E A+ A  +L  +E   ++A Y+ M N+Y+   +WE V +++  MR   VR    +SW++
Sbjct: 582 ELAEIAWKRLQVLEP-HNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQ 640

Query: 622 LKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYH 681
           +   VH+F A  + HP   +I  ++  L+ EMKK GY PDTSC   D  +  K + L  H
Sbjct: 641 IDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGH 700

Query: 682 SERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDG 741
           +E+LA+ + LI     +PI V+KN   C+D H   K +S +  REI +++ +R HHF+DG
Sbjct: 701 TEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDG 760

Query: 742 FCSCRDFW 749
            CSC D W
Sbjct: 761 KCSCNDSW 768



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 216/463 (46%), Gaps = 48/463 (10%)

Query: 192 LGRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
           LG  +H  ++K      +  V +A +  Y +   +  A KLF EMP+ D +++N ++   
Sbjct: 5   LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             +  ++++++LFRE+QF+           LL V +NK     GRQIH   +     S V
Sbjct: 65  LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + NSL+ MY++ G+ E ++++F ++   +   W +++S+Y + G +++A+ L  EM   
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184

Query: 371 NISADQATF-----------------------------------ASILRASAELASLSLG 395
            +  D  T+                                   +S+L+A AE   L LG
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS----A 451
           K +H +++R+    +V+  + L+DMY K+G L  A   F  M  +NIV+WN+L+S    A
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
           C    DA+A +   E   + G +PD+++  S+ S  +  G  E+ L     M +K  + P
Sbjct: 305 CLLK-DAEALMIRME---KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAP 359

Query: 512 KKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAA 568
               + ++     ++G F  A K+  +M  E   P+    S+++        L   K+  
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
               +   + DA    A+ ++Y  +G  +S  ++   ++ + +
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL 462


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/601 (36%), Positives = 340/601 (56%), Gaps = 38/601 (6%)

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL--FGEMPEVDGVSY 243
           G  ++   +QVHA ++     ++ +V   L+   +K +  V+   L  F ++   +   Y
Sbjct: 55  GCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLY 114

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N +I  Y   E+ KES + +  ++        F F+ L      K+D+ +GRQIH QTI+
Sbjct: 115 NALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTIL 174

Query: 304 TTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE---- 358
                E + V NS++DMY KCG  E  +++F  + +   + WT +ISAYV+ GN+E    
Sbjct: 175 VGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGE 234

Query: 359 ---------------------------EALNLFIEMCRANISADQATFASILRASAELAS 391
                                      EA+  F +M    +  D+ T   ++ A A+L +
Sbjct: 235 LFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGA 294

Query: 392 LSLGKQLHSFVIRSGFMS--NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
                 +     +S F    +V  GSAL+DMY+K GS+ DA + F+ M ERN+ S++++I
Sbjct: 295 AKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMI 354

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
              A +G     +K F++MV++  +P+ V+ + VL+ACSH G++E+G Q F  M + Y +
Sbjct: 355 LGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGI 414

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
           +P  +HY  MVD+L R+G   EA +L+  MP EP   +W +++ +CRIHK+ + A  AA+
Sbjct: 415 KPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAAN 474

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL-KSKVHV 628
            LF++E       Y+ ++NIYA  G+W  VS V+K MR RG+RK  A+SW+E  K  VH 
Sbjct: 475 HLFELEPY-CIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHE 533

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F + D  HP++ EI++ +E+L+  ++ +GY+P  S   +D ++E K   L  HSE+LA+A
Sbjct: 534 FFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALA 593

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F LI+T  GS I ++KNLR C DCH+ I   S+ITGREI VRD  RFHHF DG CSC +F
Sbjct: 594 FGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNF 653

Query: 749 W 749
           W
Sbjct: 654 W 654



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 4/239 (1%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MPN++ +S   LIS YVKSGN+ +A ELF+ +  +  V+WT+++ G++Q  + REA   F
Sbjct: 208 MPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFF 267

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTAN--ELIQVHADIIKFGYNSILIICNSLVDSY 118
             M+ + G + D +T   ++S C++   A   + I+  A+  +FG    +++ ++L+D Y
Sbjct: 268 EKMQ-EFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMY 326

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  A RVF+ M +++  S++++I GFA  G   +A+KLF EM     KP+  TF 
Sbjct: 327 SKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFI 386

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
             L+A      +  G Q+   + K   ++ +      ++DL  +   + EA +L   MP
Sbjct: 387 GVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMP 445



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 49/365 (13%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPD 87
           +FN +       +  LI GY  + + +E+ + +  MR +G   P   TF  L   C    
Sbjct: 102 IFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEG-VVPVSFTFTALFKACGAKM 160

Query: 88  TANELIQVHAD-IIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI 146
                 Q+H   I+  G+   L + NS++D Y K   L+  R+VF EMP +D +S+  LI
Sbjct: 161 DVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELI 220

Query: 147 -------------------------------TGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
                                          +GFA+     EAI  F +MQ  G +  + 
Sbjct: 221 SAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEI 280

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFG 233
           T    +SA   L        +     K+ F    +V V +AL+D+YSK   V +A ++F 
Sbjct: 281 TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQI 293
            M E +  SY+ MI  +A + +  +++KLF E+  T    ++  F  +L+  ++   ++ 
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400

Query: 294 GRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WT 345
           G QI         I         +VD+  + GR +EA E+      + T+P       W 
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHEL------VKTMPIEPHGGVWG 454

Query: 346 AMISA 350
           A++ A
Sbjct: 455 ALLGA 459


>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
          Length = 703

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/526 (39%), Positives = 331/526 (62%), Gaps = 8/526 (1%)

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR---SQFPFSTLLSV 284
           AR+LF  MP+ D  +++ +++ YA + Q + +L L+R +Q    +    ++F  S+ L+ 
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSALAA 173

Query: 285 VANKLDLQIGRQIHTQTI---VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
            A     + GR++H   +   +  A  +  + ++L DMYAKCGR ++A+ +F  +     
Sbjct: 174 AAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDA 233

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCRA-NISADQATFASILRASAELASLSLGKQLHS 400
           V WTAM+  Y   G   E   LF+ M R   +  ++ T+A +LRA AE A  S G+Q+H 
Sbjct: 234 VSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHG 293

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
            + +SG   + F+ SALL MY+K G +  A++ F+ M + ++VSW A+IS  AQNG  + 
Sbjct: 294 RMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEE 353

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            L+ F+  ++SG +PD V+ + VLSAC+H GL+++GL+ F+S+ ++Y +    +HYA ++
Sbjct: 354 ALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVI 413

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDA 580
           D+L RSG F+ AEK++  M  +P++ +W+S++  CRIHKN+  A++AA+ LF++E   + 
Sbjct: 414 DLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEP-ENP 472

Query: 581 APYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTN 640
           A YV ++NIYA  G ++ V  V++ M  +G+ K+ A SW+E+  +VHVF   D+ HP+ +
Sbjct: 473 ATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKAD 532

Query: 641 EIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPI 700
           EI   ++ L  +M +EGY  D    LHD ++E K + + YHSERLA+AF +I +PEGSPI
Sbjct: 533 EIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPI 592

Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
            V KNLR C DCHAAIKLIS+I  R+I VRDS+       G+ S R
Sbjct: 593 KVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNSLKEQDIGYHSER 638



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 5   NTVSTNMLISGYVKSG-NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +  S N LIS   +S  +L +ARELF+ M  R   +W+ L+ GY++  Q   A  L+  M
Sbjct: 93  DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRM 152

Query: 64  RTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI---LIICNSLVDSY 118
           + + G+D   +  T ++ L+  +         ++H  +++ G ++     ++ ++L D Y
Sbjct: 153 QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMY 212

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTF 177
            K   +D ARRVF  MP +D+VS+ A++  +   G   E  +LF+ M +  G +P++FT+
Sbjct: 213 AKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTY 272

Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
           A  L A    A  + GRQVH  + K+   ++ F  +ALL +YSK   +  A ++F  M +
Sbjct: 273 AGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAK 332

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN----KLDLQI 293
            D VS+  +I+ YA N Q +E+L+ F     +        F  +LS  A+       L+I
Sbjct: 333 PDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEI 392

Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              I  Q  +            ++D+ ++ G+FE A+++  N++
Sbjct: 393 FHSIKEQYCIEHTADHYAC---VIDLLSRSGQFERAEKMIGNMA 433



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 24/140 (17%)

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE--------DMVQSGYQPDSV 478
           L  A + F  MP+R+  +W+AL+S  A++G  +A L  +         D   + +   S 
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 479 SLLSVLSACS------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
              +  + C       HC ++  G+                  ++++ D+  + G  D+A
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGG---------DAVLWSALADMYAKCGRVDDA 221

Query: 533 EKLMAQMPFEPDEIMWSSVI 552
            ++  +MP   D + W++++
Sbjct: 222 RRVFDRMPVR-DAVSWTAMV 240


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/658 (34%), Positives = 377/658 (57%), Gaps = 2/658 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI  Y  +G +  AR +F+ +  R  + W +++ GY +   F  A   F  MRT   S  
Sbjct: 186 LIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSY-SMV 244

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VT+  +LS C+         QVH  +I  G+     + N+LV  Y K   L  AR++F
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
             MPQ D+V++N LI G+ + G  +EA  LF  M   G KP   TFA+ L + +    + 
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 364

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             ++VH+++V+     +V++ +AL+D+Y K   V  ARK+F +   VD      MI+ Y 
Sbjct: 365 HCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYV 424

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            +    +++  FR L       +    +++L   A    L++G+++H   +     + V 
Sbjct: 425 LHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVN 484

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V +++ DMYAKCGR + A E F  +S   ++ W +MIS++ Q G  E A++LF +M  + 
Sbjct: 485 VGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSG 544

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
              D  + +S L ++A L +L  GK++H +VIR+ F S+ F  SAL+DMY+K G L  A 
Sbjct: 545 AKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALAR 604

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F  M  +N VSWN++I+A   +G A+  L  F +M+++G  PD V+ L ++SAC H G
Sbjct: 605 CVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAG 664

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+ EG+ YF+ MT++Y +  + EHYA MVD+  R+G   EA   +  MPF PD  +W ++
Sbjct: 665 LVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTL 724

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E AK A+  L +++  +++  YV +SN++A AG+W SV +V++ M+E+GV
Sbjct: 725 LGACRLHGNVELAKLASRHLLELDP-KNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
           +K+  YSW+++    H+F+A +  HP++ EI   + +L+ E++K+GY P     LH +
Sbjct: 784 QKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQPYLPLHPQ 841



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 230/452 (50%), Gaps = 3/452 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K GNL  AR+LFN+M     V+W  LI GY Q     EA  LF  M    G 
Sbjct: 285 NTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAM-ISAGV 343

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD VTFA+ L    E  +     +VH+ I++      + + ++L+D Y K   +++AR+
Sbjct: 344 KPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARK 403

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F++    D     A+I+G+   GLN +AI  F  +   G  P+  T A+ L A   LA 
Sbjct: 404 IFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAA 463

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LG+++H  ++K      V V +A+ D+Y+K   +  A + F  M E D + +N MI+ 
Sbjct: 464 LKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISS 523

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           ++ N + + ++ LFR++  +         S+ LS  AN   L  G+++H   I     S+
Sbjct: 524 FSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSD 583

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             VA++L+DMY+KCG+   A+ +F  ++  + V W ++I+AY   G   E L+LF EM R
Sbjct: 584 TFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLR 643

Query: 370 ANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           A +  D  TF  I+ A      +  G    H      G  + +   + ++D+Y ++G L 
Sbjct: 644 AGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLH 703

Query: 429 DAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +A    K MP   +   W  L+ AC  +G+ +
Sbjct: 704 EAFDAIKSMPFTPDAGVWGTLLGACRLHGNVE 735



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 225/461 (48%), Gaps = 1/461 (0%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YV  G ++    LF  +    A+ W  +I G      F  A   +  M     S PD  T
Sbjct: 89  YVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVS-PDKYT 147

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           F  ++  C   +     + VH      G++  L + ++L+  Y     +  ARRVF E+P
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
           Q+D++ +N ++ G+ K G    A+  F  M+      +  T+   LS         LG Q
Sbjct: 208 QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQ 267

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           VH  V+ + F  +  VAN L+ +YSK   + +ARKLF  MP+ D V++N +I  Y  N  
Sbjct: 268 VHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGF 327

Query: 256 YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANS 315
             E+  LF  +           F++ L  +     L+  +++H+  +      +V + ++
Sbjct: 328 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSA 387

Query: 316 LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISAD 375
           L+D+Y K G  E A++IF   + +     TAMIS YV  G   +A+N F  + +  +  +
Sbjct: 388 LIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPN 447

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
             T AS+L A A LA+L LGK+LH  +++    + V  GSA+ DMYAK G L  A + F+
Sbjct: 448 SLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFR 507

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
            M E + + WN++IS+ +QNG  +  +  F  M  SG + D
Sbjct: 508 RMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 254/514 (49%), Gaps = 14/514 (2%)

Query: 53  FREAFKLFVDMRTDGGS----------DPDYVT--FATLLSGCSEPDTANELIQVHADII 100
           FR AF     M T G S            DY+T    +L   CS+     +  QVH  II
Sbjct: 12  FRLAFSRSKLMHTAGTSICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQII 71

Query: 101 KFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK 160
             G + +  + + ++  Y     +     +F  +   +++ +N +I G    G  + A+ 
Sbjct: 72  VGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALL 131

Query: 161 LFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYS 220
            + +M      P  +TF   + A  GL ++ L   VH       F  ++FV +AL+ LY+
Sbjct: 132 FYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYA 191

Query: 221 KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
            +  + +AR++F E+P+ D + +NVM+  Y  +  +  ++  F  ++ +    +   ++ 
Sbjct: 192 DNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTC 251

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
           +LS+ A +    +G Q+H   I +    + +VAN+LV MY+KCG   +A+++F  +    
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311

Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
           TV W  +I+ YVQ G  +EA  LF  M  A +  D  TFAS L +  E  SL   K++HS
Sbjct: 312 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 371

Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
           +++R     +V+  SAL+D+Y K G ++ A + F++    ++    A+IS    +G    
Sbjct: 372 YIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNID 431

Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
            + +F  ++Q G  P+S+++ SVL AC+    ++ G +    + +K +L       +++ 
Sbjct: 432 AINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKK-QLENIVNVGSAIT 490

Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           D+  + G  D A +   +M  E D I W+S+I+S
Sbjct: 491 DMYAKCGRLDLAYEFFRRMS-ETDSICWNSMISS 523



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 2/160 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + +T   + LI  Y K G LA AR +FN M  +  VSW  +I  Y      RE   LF +
Sbjct: 581 SSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHE 640

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSLVDSYCKI 121
           M    G  PD+VTF  ++S C       E I   H    ++G  + +     +VD Y + 
Sbjct: 641 M-LRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRA 699

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKL 161
             L  A    K MP          + G  +   N E  KL
Sbjct: 700 GRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKL 739


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/735 (32%), Positives = 379/735 (51%), Gaps = 72/735 (9%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
            R +FN + +     W ++I  Y Q N    AF L+  M ++     +Y T+  L+  CS
Sbjct: 31  TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNY-TYPLLIQACS 89

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNA 144
              +  E  QVH  ++K G++S + + N+L++ +     +  A RVF E    DSVS+N+
Sbjct: 90  IRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNS 149

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           ++ G+ + G  EEA  ++ +M                                       
Sbjct: 150 ILAGYIEIGNVEEAKHIYHQMPE------------------------------------- 172

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
              ++  +N+++ L+     VVEA KLF EM E D V+++ +I C+  NE Y+E+++ F 
Sbjct: 173 --RSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 230

Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
            +        +    + LS  AN L + +G+ IH+ ++     S + + N+L+ MY+KCG
Sbjct: 231 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 290

Query: 325 R-------FEEA------------------------KEIFANLSHISTVPWTAMISAYVQ 353
                   F+EA                        K IF ++     V W++MIS Y Q
Sbjct: 291 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 350

Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
               +E L LF EM  +    D+ T  S++ A A LA+L  GK +H+++ R+G   NV  
Sbjct: 351 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVIL 410

Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGY 473
           G+ L+DMY K G ++ A++ F  M E+ I +WNALI   A NG  +++L  F +M +   
Sbjct: 411 GTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHV 470

Query: 474 QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAE 533
            P+ ++ + VL AC H GL++EG  +F SM   +K++P  +HY  MVD+L R+G   EAE
Sbjct: 471 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 530

Query: 534 KLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVA 593
           +L+ +MP  PD   W +++ +C+ H + E  ++   +L +++   D   +V +SNIYA  
Sbjct: 531 ELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGF-HVLLSNIYASK 589

Query: 594 GQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEM 653
           G+W+ V +++  M +  V K+   S +E    +H F A D+ HP  + I   +  +  ++
Sbjct: 590 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 649

Query: 654 KKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCH 713
           K EGY PD +  L D DEE K  +L  HSE+LAIAF LIN    +PI +MKNLR C DCH
Sbjct: 650 KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH 709

Query: 714 AAIKLISKITGREIT 728
            A KLISK   R+I 
Sbjct: 710 TAAKLISKAFCRKIV 724



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 228/509 (44%), Gaps = 75/509 (14%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI+ +    N+  A  +FN      +VSW  ++ GY +     EA  ++  M      
Sbjct: 117 NTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM------ 170

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
                           P+ +  +I  ++ I+ FG          LV   CK+        
Sbjct: 171 ----------------PERS--IIASNSMIVLFGM-------RGLVVEACKL-------- 197

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F EM +KD V+++ALI  F +  + EEAI+ FV M  +G    +    +ALSA   L  
Sbjct: 198 -FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT- 248
           + +G+ +H+  +K      + + NAL+ +YSK   ++ ARKLF E   +D +S+N MI+ 
Sbjct: 257 VNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISG 316

Query: 249 ---C---------------------------YAWNEQYKESLKLFRELQFTRFDRSQFPF 278
              C                           YA N+ + E+L LF+E+Q + F   +   
Sbjct: 317 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 376

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            +++S  A    L+ G+ +H           V +  +L+DMY KCG  E A E+F  +  
Sbjct: 377 VSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIE 436

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK-Q 397
                W A+I      G +E +L++F  M + +++ ++ TF  +L A   +  +  G+  
Sbjct: 437 KGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHH 496

Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
            +S +       NV     ++D+  ++G L++A +    MP   ++ +W AL+ AC ++G
Sbjct: 497 FYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHG 556

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           D++   +    +++   QPD      +LS
Sbjct: 557 DSEMGRRVGRKLIE--LQPDHDGFHVLLS 583



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 34/391 (8%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ +++N +I  +   G +  A +LF+ M+++  V+W+ LI  + Q   + EA + F
Sbjct: 170 MPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTF 229

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI------------- 107
           V M    G   D V   + LS C+     N    +H+  +K G  S              
Sbjct: 230 VGMHKI-GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 288

Query: 108 ------------------LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
                             LI  NS++  Y K   +D A+ +F  MP+KD VS++++I+G+
Sbjct: 289 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 348

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
           A+  L +E + LF EMQ  GFKP + T  + +SA   LA +  G+ VHA++ +     NV
Sbjct: 349 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 408

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            +   L+D+Y K  CV  A ++F  M E    ++N +I   A N   + SL +F  ++  
Sbjct: 409 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 468

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLVDMYAKCGRFEE 328
               ++  F  +L    +   +  G+      I    I   VK    +VD+  + G+ +E
Sbjct: 469 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 528

Query: 329 AKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           A+E+   +     V  W A++ A  + G+ E
Sbjct: 529 AEELLNRMPMTPDVATWGALLGACKKHGDSE 559



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 26/182 (14%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +    LI  Y+K G + TA E+F  M+++   +W  LI G +       +  +F +M+
Sbjct: 407 NVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 466

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE-------LIQVH---ADIIKFGYNSILIICNSL 114
                 P+ +TF  +L  C      +E       +I  H    ++  +G          +
Sbjct: 467 -KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYG---------CM 516

Query: 115 VDSYCKIRCLDLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKL---FVEMQ--HL 168
           VD   +   L  A  +   MP   D  ++ AL+    K G +E   ++    +E+Q  H 
Sbjct: 517 VDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 576

Query: 169 GF 170
           GF
Sbjct: 577 GF 578


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/643 (33%), Positives = 362/643 (56%), Gaps = 5/643 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N  +   VK+G+L  AR +F+ M  +  +SWT LI GY   N   EA  LF +MR + G
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 69  --SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
              DP  ++ A    G +      EL+  H   +K G  + + + ++L+D Y K   +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELL--HGYAVKTGLVNSVFVGSALLDMYTKNGKIFE 169

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            RRVF EMP ++ VS+ A+ITG  + G N+EA+  F EM     +   +TFA AL A   
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              +  GR++HA  +K  F  + FVAN L  +Y+K   +     LF +M   D VS+  +
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT      Q + +++ F  ++ +    +++ F+ ++S  AN   ++ G Q+H   +    
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            + + V NS++ MYAKCG+   +  IF  ++    V W+ +I+ Y Q G++ EA  L   
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSW 409

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M        +   AS+L A   +A L  GKQLH++V+  G        SAL++MY K GS
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGS 469

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +++A + F      +IVSW A+I+  A++G ++  +  FE + + G +PDSV+ + VLSA
Sbjct: 470 IEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL++ G +YFN+M++KY++ P KEHY  M+D+LCR+G   +AE ++  MPF  D++
Sbjct: 530 CSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV 589

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WS+++ +CR+H ++E  ++ A+++ ++E    A  ++ ++NIYA  G+W   + ++K M
Sbjct: 590 VWSTLLRACRVHGDVERGRRTAERILQLEP-NCAGTHITLANIYASKGKWREAADIRKLM 648

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           + +GV K   +SW+++K  V  F A D  HPQ  +I   ++ L
Sbjct: 649 KSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 63/414 (15%)

Query: 289 LDLQIGRQIH---TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +DLQ+  + +   +Q I   + +++  +N  +    K G    A+ +F  +S    + WT
Sbjct: 25  IDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWT 84

Query: 346 AMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            +IS YV   +  EAL LF  M   + +  D    +   +A    + ++ G+ LH + ++
Sbjct: 85  TLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVK 144

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           +G +++VF GSALLDMY K+G + +  + F EMP RN+VSW A+I+   + G  +  L  
Sbjct: 145 TGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS-----------------------------------H 489
           F +M +S  + DS +    L AC+                                    
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK 264

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG---CFDEAEKLMAQMPFEPDEI 546
           CG +E GL  F  M+ +  +      + +++  L + G   C  +A   M +    P+E 
Sbjct: 265 CGKLEYGLTLFEKMSMRDVVS-----WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            +++VI+ C     +E+ ++    +  +      +   ++  +YA  GQ  S S +   M
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
             R +      SW  + +           + Q   +    E L+  M+ EG KP
Sbjct: 380 TRRDI-----VSWSTIIAG----------YSQGGHVSEAFE-LLSWMRMEGPKP 417


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/643 (33%), Positives = 361/643 (56%), Gaps = 5/643 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N  +   VK+G+L  AR +F+ M  +  +SWT LI GY   N   EA  LF +MR + G
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 69  --SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
              DP  ++ A    G +      EL+  H   +K G  + + + ++L+D Y K   +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELL--HGYAVKTGLVNSVFVGSALLDMYTKNGKIFE 169

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
            RRVF EMP ++ VS+ A+ITG  + G N+EA+  F EM     +   +TFA AL A   
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
              +  GR++HA  +K  F  + FVAN L  +Y+K   +     LF +M   D VS+  +
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           IT      Q + +++ F  ++ +    +++ F+ ++S  AN   ++ G Q+H   +    
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
            + + V NS++ MYAKCG+   +  IF  ++    V W+ +I+ Y Q G++ EA  L   
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSW 409

Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
           M        +   AS+L A   +A L  GKQLH++V+  G        SAL++MY K GS
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGS 469

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           +++A + F      +IVSW A+I+  A++G ++  +  FE + + G +PDSV+ + VLSA
Sbjct: 470 IEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSA 529

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           CSH GL++ G  YFN+M++KY++ P KEHY  M+D+LCR+G   +AE ++  MPF  D++
Sbjct: 530 CSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV 589

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +WS+++ +CR+H ++E  ++ A+++ ++E    A  ++ ++NIYA  G+W   + ++K M
Sbjct: 590 VWSTLLRACRVHGDVERGRRTAERILQLEP-NCAGTHITLANIYASKGKWREAADIRKLM 648

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           + +GV K   +SW+++K  V  F A D  HPQ  +I   ++ L
Sbjct: 649 KSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLL 691



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 63/414 (15%)

Query: 289 LDLQIGRQIH---TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
           +DLQ+  + +   +Q I   + +++  +N  +    K G    A+ +F  +S    + WT
Sbjct: 25  IDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWT 84

Query: 346 AMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
            +IS YV   +  EAL LF  M   + +  D    +   +A    + ++ G+ LH + ++
Sbjct: 85  TLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVK 144

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           +G +++VF GSALLDMY K+G + +  + F EMP RN+VSW A+I+   + G  +  L  
Sbjct: 145 TGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204

Query: 465 FEDMVQSGYQPDSVSLLSVLSACS-----------------------------------H 489
           F +M +S  + DS +    L AC+                                    
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK 264

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG---CFDEAEKLMAQMPFEPDEI 546
           CG +E GL  F  M+ +  +      + +++  L + G   C  +A   M +    P+E 
Sbjct: 265 CGKLEYGLTLFEKMSMRDVVS-----WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEY 319

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
            +++VI+ C     +E+ ++    +  +      +   ++  +YA  GQ  S S +   M
Sbjct: 320 TFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379

Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
             R +      SW  + +           + Q   +    E L+  M+ EG KP
Sbjct: 380 TRRDI-----VSWSTIIAG----------YXQGGHVSEAFE-LLSWMRMEGPKP 417


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/742 (32%), Positives = 383/742 (51%), Gaps = 62/742 (8%)

Query: 67   GGSDPDYVTFATL-----LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            G +  +Y  F TL     L+      T+  L Q+HA +   G +        L++SY +I
Sbjct: 334  GEASAEYACFFTLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQI 393

Query: 122  RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAA 180
               + ++RVF   P+ DS  +  LI  +   G  EEA+ L+ EM +    + S+F F + 
Sbjct: 394  GIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSV 453

Query: 181  LSAGVGLADIALG----------------------------------------------- 193
            L A  G  D+++G                                               
Sbjct: 454  LKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLG 513

Query: 194  -----RQVHAFVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
                 R VH FV++      + F+  AL++LY+    + +  K+F  + E   +S+N +I
Sbjct: 514  RVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLI 573

Query: 248  TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
            + +  N Q +E+L LF ++Q        +  ++ LS        Q+G QIH   I T   
Sbjct: 574  SIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF 633

Query: 308  SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            ++  V N+L+DMYAKCG    A ++F  +   S V W +MI  + Q G   EA+ LF +M
Sbjct: 634  NDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM 692

Query: 368  CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
                +  D+ TF S+++A + L  L  GK +H  +I  G   + +  +AL DMY+K G L
Sbjct: 693  YMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGEL 752

Query: 428  KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
            + A   F  M ER+IVSW+ +I+    +G   AT+  F  M+ SG +P+ ++ + +LSAC
Sbjct: 753  QMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 812

Query: 488  SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
            SH G +EEG  YFNSM++ + + PK +H+A MVD+L R+G  + A +++  +PF  +  +
Sbjct: 813  SHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 871

Query: 548  WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            W +++N CRIHK ++  K     L  ++   D   Y  +SNIYA  G W+   +V+  M+
Sbjct: 872  WGALLNGCRIHKRIDIIKSIEKNLLDVDTA-DTGYYTLLSNIYAEEGTWDKFGKVRSMMK 930

Query: 608  ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
             +G+RKV  YS +E+  K++ F   D  H QT +I R +EN    +  + Y  +   ++ 
Sbjct: 931  SKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIV 990

Query: 668  DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
               +  K  ++  HSE+LAIAF +INT  G+ + + KNLR C DCH+  K+ SKITGREI
Sbjct: 991  GTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREI 1050

Query: 728  TVRDSSRFHHFKDGFCSCRDFW 749
             +RD +RFH F++G CSC D+W
Sbjct: 1051 IMRDLNRFHCFRNGSCSCNDYW 1072



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 231/478 (48%), Gaps = 32/478 (6%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMV--DRTAVSWTIL--------------IG 45
           P  ++    +LI  YV  G    A  L++ MV  D+T +S  +               +G
Sbjct: 407 PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 466

Query: 46  GYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDT--------ANELIQVHA 97
           G  +  Q  E   +F  M ++   +PD VT  ++   CSE  +          E   VH 
Sbjct: 467 G--KNGQASEGLDMFSQMISEA-VEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHG 523

Query: 98  DIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNE 156
            +I+   +  L  +  +L++ Y     L    +VF+ + +K  +S+N LI+ F + G  E
Sbjct: 524 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 583

Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANAL 215
           EA+ LFV+MQ  G  P  ++ A++LSA   ++   LG Q+H +++KT NF  N FV NAL
Sbjct: 584 EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF--NDFVQNAL 641

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           +D+Y+K   V  A K+F ++ E   V++N MI  ++ N    E++ LF ++        +
Sbjct: 642 IDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDK 701

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             F +++   ++   L+ G+ +H + I+     +  +  +L DMY+KCG  + A  +F  
Sbjct: 702 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 761

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +S  S V W+ MI+ Y   G +   ++LF +M  + I  +  TF  IL A +   ++  G
Sbjct: 762 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 821

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           K   + +   G        + ++D+ +++G L  A Q    +P   N   W AL++ C
Sbjct: 822 KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 879


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 402/714 (56%), Gaps = 18/714 (2%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMV---DRTAVSWTILIGGYSQKNQFREAFKLFV 61
           ++V  N LIS Y KSG+ A A ++F +M     R  VSW+ ++  Y    +  +A K+FV
Sbjct: 96  DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCK 120
           +    G    DY  +  ++  CS  D           ++K G + S + +  SL+D + K
Sbjct: 156 EFLELGLVPNDYC-YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214

Query: 121 IR-CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
                + A +VF +M + + V++  +IT   + G   EAI+ F++M   GF+   FT ++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMP 236
             SA   L +++LG+Q+H++ +++  V++V    +L+D+Y+K      V + RK+F  M 
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332

Query: 237 EVDGVSYNVMITCYAWN-EQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           +   +S+  +IT Y  N     E++ LF E+      + + F FS+      N  D ++G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           +Q+  Q       S   VANS++ M+ K  R E+A+  F +LS  + V +   +    + 
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
            N E+A  L  E+    +     TFAS+L   A + S+  G+Q+HS V++ G   N    
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512

Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
           +AL+ MY+K GS+  A + F  M  RN++SW ++I+  A++G A   L++F  M++ G +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572

Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
           P+ V+ +++LSACSH GL+ EG ++FNSM + +K++PK EHYA MVD+LCR+G   +A +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632

Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            +  MPF+ D ++W + + +CR+H N E  K AA ++ +++   + A Y+ +SNIYA AG
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP-NEPAAYIQLSNIYACAG 691

Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           +WE  +++++ M+ER + K    SW+E+  K+H F   D  HP  ++I  +++ L+ E+K
Sbjct: 692 KWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751

Query: 655 KEGYKPDTSCALHD----EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMK 704
           + GY PDT   LH      DE  K   L  HSE++A+AF LI+T +  P+ +++
Sbjct: 752 RCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQ 805



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/568 (27%), Positives = 285/568 (50%), Gaps = 18/568 (3%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           LI  +      R A      M  DG    D VTF++LL  C           VHA +I+F
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEM---PQKDSVSFNALITGFAKEGLNEEAI 159
                 ++ NSL+  Y K      A  VF+ M    ++D VS++A++  +   G   +AI
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDL 218
           K+FVE   LG  P+D+ + A + A      + +GR    F++KT +F  +V V  +L+D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 219 YSKHDCVVE-ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
           + K +   E A K+F +M E++ V++ +MIT        +E+++ F ++  + F+  +F 
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC---GRFEEAKEIFA 334
            S++ S  A   +L +G+Q+H+  I +  + +V+   SLVDMYAKC   G  ++ +++F 
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329

Query: 335 NLSHISTVPWTAMISAYVQKGNL-EEALNLFIEM-CRANISADQATFASILRASAELASL 392
            +   S + WTA+I+ Y++  NL  EA+NLF EM  + ++  +  TF+S  +A   L+  
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389

Query: 393 SLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISAC 452
            +GKQ+     + G  SN    ++++ M+ KS  ++DA + F+ + E+N+VS+N  +   
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449

Query: 453 AQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPK 512
            +N + +   K   ++ +      + +  S+LS  ++ G I +G Q  +S   K  L   
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCN 508

Query: 513 KEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH----KNLEFAKKAA 568
           +    +++ +  + G  D A ++   M    + I W+S+I     H    + LE   +  
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMI 567

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQW 596
           ++  K  ++   A   A S++  V+  W
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGW 595



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 291/644 (45%), Gaps = 107/644 (16%)

Query: 165 MQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
           M   G +P D  TF++ L + +   D  LG+ VHA +++ +   +  + N+L+ LYSK  
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 224 CVVEARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
              +A  +F  M      D VS++ M+ CY  N +  +++K+F E        + + ++ 
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC-GRFEEAKEIFANLSH 338
           ++   +N   + +GR      + T    S+V V  SL+DM+ K    FE A ++F  +S 
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
           ++ V WT MI+  +Q G   EA+  F++M  +   +D+ T +S+  A AEL +LSLGKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 399 HSFVIRSGFMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           HS+ IRSG + +V    +L+DMYAK    GS+ D  + F  M + +++SW ALI+   +N
Sbjct: 292 HSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 456 GD-AQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHC----------------GL----- 492
            + A   +  F +M+  G+ +P+  +  S   AC +                 GL     
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 493 --------------IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
                         +E+  + F S+++K  +      Y + +D  CR+  F++A KL+++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLV-----SYNTFLDGTCRNLNFEQAFKLLSE 464

Query: 539 MP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
           +           ++S+++      ++   ++   Q+ K+    +     A+ ++Y+  G 
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524

Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKV--HVFTANDELHPQTNEIRRKIENLMQEM 653
            ++ S+V   M  R V      SW  + +    H F              R +E   Q M
Sbjct: 525 IDTASRVFNFMENRNV-----ISWTSMITGFAKHGFAI------------RVLETFNQ-M 566

Query: 654 KKEGYKPD--------TSCALHD-------------EDEEIKVESLKY--------HSER 684
            +EG KP+        ++C+                ED +IK +   Y         +  
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626

Query: 685 LAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           L  AF  INT P  + +LV +        H+  +L  K+  R+I
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL-GKLAARKI 669



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 188/445 (42%), Gaps = 68/445 (15%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M + + +S   LI+GY+K+ NLAT                              EA  LF
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLAT------------------------------EAINLF 360

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M T G  +P++ TF++    C          QV     K G  S   + NS++  + K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A+R F+ + +K+ VS+N  + G  +    E+A KL  E+       S FTFA+ 
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LS    +  I  G Q+H+ VVK     N  V NAL+ +YSK   +  A ++F  M   + 
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S+  MIT +A +      L+ F ++       ++  +  +LS  ++   +  G + H  
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR-HFN 599

Query: 301 TIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
           ++      + K+ +   +VD+  + G   +A E       I+T+P+ A +  +       
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF------INTMPFQADVLVW------- 646

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
                F+  CR + + +    A+  R   EL        +                  L 
Sbjct: 647 ---RTFLGACRVHSNTELGKLAA--RKILELDPNEPAAYIQ-----------------LS 684

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIV 443
           ++YA +G  +++ +  ++M ERN+V
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLV 709



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 121/263 (46%), Gaps = 9/263 (3%)

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRS 405
           +I  ++  G+L  A++    M R  I   D  TF+S+L++        LGK +H+ +I  
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 406 GFMSNVFSGSALLDMYAKSGS---LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
               +    ++L+ +Y+KSG     +D  +T +   +R++VSW+A+++    NG     +
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
           K F + ++ G  P+     +V+ ACS+   +  G      + +            S++D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 523 LCRS-GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
             +    F+ A K+  +M  E + + W+ +I  C     + F ++A      M      +
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFES 267

Query: 582 PYVAMSNIYAVAGQWESVSQVKK 604
               +S++++   + E++S  K+
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQ 290


>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/603 (37%), Positives = 342/603 (56%), Gaps = 43/603 (7%)

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY- 243
           +G  +  + +++HA ++K+    +      L+D Y K   + +A KLF  +P+ D V++ 
Sbjct: 19  LGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWA 78

Query: 244 NVMITCYAWNEQYKE---SLKLFRELQFTRFDRSQFPFSTLLSVVAN--KLDLQIGRQIH 298
            V+  C   N  +K    SL +  E          F FS+L+   AN   + +++G+Q+H
Sbjct: 79  TVLSACNLSNLPHKAFSISLPILHE----GLQPDHFVFSSLIKACANLGSVHVKLGKQLH 134

Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY------- 351
            + +++    +  V +SLVDMYAK    +  + +F ++  +S++ WTAMIS Y       
Sbjct: 135 ARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKL 194

Query: 352 ------------------------VQKGNLEEALNLFIEMCRANIS-ADQATFASILRAS 386
                                   VQ GN  +AL LF+EM R  +S AD    +S++ A 
Sbjct: 195 EALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGAC 254

Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
           A  A   LGKQ+H  VI  G+ S +F  +AL+DMYAK   +  A   F EM  +++VSW 
Sbjct: 255 ANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWT 314

Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
           ++I   AQ+G A+  L  ++DMV +G +P+ V+ + ++ ACSH GL+ +G   F SM + 
Sbjct: 315 SIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVED 374

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
           + +RP  +HY  ++D+  RSG  DEAE L+  MP +PDE  W++++++C+ H N + A +
Sbjct: 375 FGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVR 434

Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
            AD L  + K  D + Y+ +SNIYA AG WE+VS V+K M  + V+KV  YS V+L  + 
Sbjct: 435 IADHLLDL-KPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREF 493

Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
            VF A +   P  +EI   +  L  EM++ GY PDTS  L D D++ K   L +HSERLA
Sbjct: 494 QVFHAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLA 553

Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
           +A+ L+    G+ I ++KNLR C DCH  +KLIS IT REI VRD  R+HHFKDG CSC 
Sbjct: 554 LAYGLLKAVPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCN 613

Query: 747 DFW 749
           DFW
Sbjct: 614 DFW 616



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 215/430 (50%), Gaps = 37/430 (8%)

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
           ++HA IIK G N       +L+D+Y K   L  A ++F  +PQ+D V++  +++      
Sbjct: 29  KLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSN 88

Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFV 211
           L  +A  + + + H G +P  F F++ + A   +G   + LG+Q+HA  + + F E+  V
Sbjct: 89  LPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVV 148

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
            ++L+D+Y+K +     R +F  + E+  +S+  MI+ YA + +  E+L+LFRE  F   
Sbjct: 149 KSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNL 208

Query: 272 ----------------DRSQFPF----------------STLLSVVANKLDLQIGRQIHT 299
                           + + + F                S+++   AN    ++G+Q+H 
Sbjct: 209 YAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHC 268

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
             I     S + ++N+LVDMYAKC     AK IF  +     V WT++I    Q G  EE
Sbjct: 269 VVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEE 328

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALL 418
           AL L+ +M  A +  ++ TF  ++ A + +  +S G+ L  S V   G   ++   + LL
Sbjct: 329 ALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLL 388

Query: 419 DMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPD 476
           D++++SG L +A    + MP + +  +W AL+SAC  +G+ +  ++  + ++      P 
Sbjct: 389 DLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPS 448

Query: 477 SVSLLSVLSA 486
           S  LLS + A
Sbjct: 449 SYILLSNIYA 458



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 122/233 (52%), Gaps = 1/233 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +++S   +ISGY +SG    A ELF     +   +WT LI G  Q     +A  LFV+MR
Sbjct: 176 SSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMR 235

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            +G S  D +  ++++  C+         QVH  +I  GY S L I N+LVD Y K   +
Sbjct: 236 REGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDV 295

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A+ +F EM +KD VS+ ++I G A+ GL EEA+ L+ +M   G KP++ TF   + A 
Sbjct: 296 VAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYAC 355

Query: 185 VGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
             +  ++ GR +   +V+      ++     LLDL+S+   + EA  L   MP
Sbjct: 356 SHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMP 408



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 184/397 (46%), Gaps = 37/397 (9%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +      LI  Y K G L  A +LF+++  +  V+W  ++   +  N   +AF + + 
Sbjct: 40  NHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLP 99

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCK 120
           +  + G  PD+  F++L+  C+   + +  +  Q+HA  +   +    ++ +SLVD Y K
Sbjct: 100 ILHE-GLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAK 158

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIK-------------------- 160
               D  R VF  + +  S+S+ A+I+G+A+ G   EA++                    
Sbjct: 159 FELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGL 218

Query: 161 -----------LFVEMQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
                      LFVEM+  G   +D    ++ + A    A   LG+QVH  V+   +   
Sbjct: 219 VQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESC 278

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +F++NAL+D+Y+K   VV A+ +F EM   D VS+  +I   A +   +E+L L+ ++  
Sbjct: 279 LFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVL 338

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFE 327
                ++  F  L+   ++   +  GR +    +    I   ++    L+D++++ G  +
Sbjct: 339 AGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLD 398

Query: 328 EAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNL 363
           EA+ +   +      P W A++SA    GN + A+ +
Sbjct: 399 EAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRI 435



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 17/240 (7%)

Query: 381 SILRASAELASLS-----LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           ++L   ++L SL      + K+LH+ +I+SG   +      L+D Y K G LKDA++ F 
Sbjct: 8   TVLALKSQLFSLGRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFD 67

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE 495
            +P+++ V+W  ++SAC  +            ++  G QPD     S++ AC++ G +  
Sbjct: 68  ALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHV 127

Query: 496 GLQYFNSMTQKYKLRPKKEH---YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
            L     +  ++ L P  E     +S+VD+  +    D    +   + FE   I W+++I
Sbjct: 128 KLG--KQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSI-FELSSISWTAMI 184

Query: 553 NS-CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           +   R  + LE     A +LF+    ++   + A+ +    +G       +   MR  GV
Sbjct: 185 SGYARSGRKLE-----ALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGV 239


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/561 (37%), Positives = 337/561 (60%), Gaps = 14/561 (2%)

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
           +HA V+K+    + F+ + L+ +Y K     +A++LF EMP  D VS+N +++  +    
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 256 YKESLKLFRELQFTRFDRSQFPFS-TLLSVV---ANKLDLQIGRQIHTQTIVTTAISEVK 311
               L  F  +   R +  + P   TLLSVV   A    L  G+ +H   +      + K
Sbjct: 221 LGACLNAFCRM---RTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAK 277

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           V NSL++MY K G  + A ++F  +   S V W +M+  +   G  E+ ++LF  M RA 
Sbjct: 278 VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 337

Query: 372 ISADQATFASILRASAELASLSLGKQ---LHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
           I+ DQAT  ++LRA  +     LG+Q   +H+++ R GF +++   +ALL++YAK G L 
Sbjct: 338 INPDQATMVALLRACTDTG---LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLN 394

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            +   F+E+ +R+ ++W A+++  A +   +  +K F+ MV+ G + D V+   +LSACS
Sbjct: 395 ASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACS 454

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H GL+EEG +YF  M++ Y++ P+ +HY+ MVD+L RSG  ++A +L+  MP EP   +W
Sbjct: 455 HSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVW 514

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CR++ N+E  K+ A+QL  ++   D   Y+ +SNIY+ AG W   S+V+  M+E
Sbjct: 515 GALLGACRVYGNVELGKEVAEQLLSLDP-SDHRNYIMLSNIYSAAGLWRXASKVRXLMKE 573

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
           R + +    S++E  +K+H F   D+LHP+++EI  K+E L++++ + G  P T   LHD
Sbjct: 574 RRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHD 633

Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
            DEE+KV+ +  HSE+LAIAF L+ T  G P+++ KNLR C DCH+  K  S +  R I 
Sbjct: 634 IDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTII 693

Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
           +RDS RFHHF DG CSCRD+W
Sbjct: 694 IRDSKRFHHFADGLCSCRDYW 714



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 178/352 (50%), Gaps = 8/352 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G    A+ LF+ M +R  VSW  L+ G S +         F  MRT+ G  P
Sbjct: 180 LVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 239

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           + VT  +++S C+     +E   +H  ++K G +    + NSL++ Y K+  LD A ++F
Sbjct: 240 NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 299

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           +EMP +  VS+N+++      G  E+ + LF  M+  G  P   T  A L A     D  
Sbjct: 300 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRA---CTDTG 356

Query: 192 LGRQ---VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           LGRQ   +HA++ +  F  ++ +A ALL+LY+K   +  +  +F E+ + D +++  M+ 
Sbjct: 357 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLA 416

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAI 307
            YA +   +E++KLF  +     +     F+ LLS  ++   ++ G++     + V    
Sbjct: 417 GYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVE 476

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
             +   + +VD+  + GR E+A E+  ++    S+  W A++ A    GN+E
Sbjct: 477 PRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVE 528



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 21/377 (5%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +HA +IK    S   I + LV  Y K+   + A+R+F EMP +D VS+N+L++G +  G 
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 155 NEEAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
               +  F  M+   G +P++ T  + +SA   +  +  G+ +H  VVK        V N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
           +L+++Y K   +  A +LF EMP    VS+N M+  +  N   ++ + LF  ++    + 
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 274 SQFPFSTLLSVVANKLDLQIGRQ---IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
            Q   +T+++++    D  +GRQ   IH         +++ +A +L+++YAK GR   ++
Sbjct: 341 DQ---ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 397

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           +IF  +    T+ WTAM++ Y       EA+ LF  M +  +  D  TF  +L A +   
Sbjct: 398 DIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 457

Query: 391 SLSLGKQLHSFVIRSGFMSNVF-------SGSALLDMYAKSGSLKDAIQTFKEMP-ERNI 442
            +  GK+          MS V+         S ++D+  +SG L+DA +  K MP E + 
Sbjct: 458 LVEEGKKYFE------IMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 511

Query: 443 VSWNALISACAQNGDAQ 459
             W AL+ AC   G+ +
Sbjct: 512 GVWGALLGACRVYGNVE 528



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 113/203 (55%), Gaps = 7/203 (3%)

Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
           S++ A +   S+S    +H+ VI+S   S+ F G  L+ MY K G  +DA + F EMP R
Sbjct: 144 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR 203

Query: 441 NIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
           ++VSWN+L+S  +  G   A L +F  M  +SG QP+ V+LLSV+SAC+  G ++EG + 
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG-KS 262

Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHK 559
            + +  K  +  K +   S++++  + G  D A +L  +MP     + W+S++    IH 
Sbjct: 263 LHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMV---VIHN 318

Query: 560 NLEFAKKAADQLFKMEKLRDAAP 582
           +  +A+K  D LF + K     P
Sbjct: 319 HNGYAEKGMD-LFNLMKRAGINP 340



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 2/229 (0%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N LI+ Y K G L  A +LF  M  R+ VSW  ++  ++      +   LF  M+   G
Sbjct: 279 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR-AG 337

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
            +PD  T   LL  C++     +   +HA I + G+N+ +II  +L++ Y K+  L+ + 
Sbjct: 338 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASE 397

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            +F+E+  +D++++ A++ G+A      EAIKLF  M   G +    TF   LSA     
Sbjct: 398 DIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSG 457

Query: 189 DIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
            +  G++    + +   VE  +   + ++DL  +   + +A +L   MP
Sbjct: 458 LVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 506



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 42/237 (17%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N + +    L++ Y K G L  + ++F  + DR  ++WT ++ GY+     REA KLF D
Sbjct: 374 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF-D 432

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +    G + D+VTF  LLS CS           H+ +++ G                  +
Sbjct: 433 LMVKEGVEVDHVTFTHLLSACS-----------HSGLVEEGK-----------------K 464

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
             ++   V++  P+ D   ++ ++    + G  E+A +L   M     +PS   + A L 
Sbjct: 465 YFEIMSEVYRVEPRLD--HYSCMVDLLGRSGRLEDAYELIKSMP---MEPSSGVWGALLG 519

Query: 183 AGVGLADIALGRQVHAFVVKTN--------FVENVFVANALLDLYSKHDCVVEARKL 231
           A     ++ LG++V   ++  +         + N++ A  L    SK   +++ R+L
Sbjct: 520 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRL 576


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/541 (36%), Positives = 330/541 (60%), Gaps = 6/541 (1%)

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +F+ N L+++Y K + + +A +LF +MP+ + +S+  MI+ Y+  + ++++L+L   +  
Sbjct: 96  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                + + +S++L       D+   R +H   I     S+V V ++L+D++AK G  E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  +     + W ++I  + Q    + AL LF  M RA   A+QAT  S+LRA   
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           LA L LG Q H  +++  +  ++   +AL+DMY K GSL+DA++ F +M ER++++W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           IS  AQNG +Q  LK FE M  SG +P+ ++++ VL ACSH GL+E+G  YF SM + Y 
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P +EHY  M+D+L ++G  D+A KL+ +M  EPD + W +++ +CR+ +N+  A+ AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            ++  ++   DA  Y  +SNIYA + +W+SV +++  MR+RG++K    SW+E+  ++H 
Sbjct: 451 KKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   D  HPQ  E+ +K+  L+  +   GY P+T+  L D + E   +SL++HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
           F L+  P    I + KNLR C DCH   KL SK+  R I +R   R+HHF+DG CSC D+
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDY 629

Query: 749 W 749
           W
Sbjct: 630 W 630



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 197/390 (50%), Gaps = 21/390 (5%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T++ L+  C      +E   +   +   G+  ++ + N L++ Y K   L+ A ++F
Sbjct: 60  DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MPQ++ +S+  +I+ ++K  ++++A++L V M     +P+ +T+++ L +  G++D+ 
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             R +H  ++K     +VFV +AL+D+++K     +A  +F EM   D + +N +I  +A
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N +   +L+LF+ ++   F   Q   +++L        L++G Q H    +     ++ 
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH--IVKYDQDLI 294

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+LVDMY KCG  E+A  +F  +     + W+ MIS   Q G  +EAL LF  M  + 
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354

Query: 372 ISADQATFASILRASAELASLSLG-------KQLHSF-VIRSGFMSNVFSGSALLDMYAK 423
              +  T   +L A +    L  G       K+L+    +R  +         ++D+  K
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY-------GCMIDLLGK 407

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           +G L DA++   EM  E + V+W  L+ AC
Sbjct: 408 AGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 37/460 (8%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N+LI+ YVK   L  A +LF+ M  R  +SWT +I  YS+    ++A +L V M  D  
Sbjct: 99  VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN- 157

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T++++L  C   +  +++  +H  IIK G  S + + ++L+D + K+   + A 
Sbjct: 158 VRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF EM   D++ +N++I GFA+   ++ A++LF  M+  GF     T  + L A  GLA
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LG Q H  +VK  + +++ + NAL+D+Y K   + +A ++F +M E D ++++ MI+
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             A N   +E+LKLF  ++ +    +      +L   ++   L+ G            I 
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392

Query: 309 EVKVA-NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALNL 363
            V+     ++D+  K G+ ++A ++   +      V W  ++ A   + N+   E A   
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452

Query: 364 FIEM---------CRANISADQATFASI-----------LRASAELASLSLGKQLHSFVI 403
            I +           +NI A+   + S+           ++     + + + KQ+H+F+I
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
                    S   ++++  K   L   +     +PE N V
Sbjct: 513 GDN------SHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 48/318 (15%)

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           AD AT++ +++      ++  G  +   +  +G    +F  + L++MY K   L DA Q 
Sbjct: 59  ADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQL 118

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS----- 488
           F +MP+RN++SW  +ISA ++    Q  L+    M++   +P+  +  SVL +C+     
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178

Query: 489 ---HCGLIEEGLQ----YFNSMTQKYKLRPKKEHYASMVDILC----------------- 524
              HCG+I+EGL+      +++   +    + E   S+ D +                  
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238

Query: 525 -RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            RS    E  K M +  F  ++   +SV+ +C     LE   +A   + K ++  D    
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILN 296

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            A+ ++Y   G  E   +V   M+ER V      +W  + S +             N   
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDV-----ITWSTMISGL-----------AQNGYS 340

Query: 644 RKIENLMQEMKKEGYKPD 661
           ++   L + MK  G KP+
Sbjct: 341 QEALKLFERMKSSGTKPN 358



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 42/312 (13%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N L+  Y K G+L  A  +FN M +R  ++W+ +I G +Q    +EA KLF  
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           M++  G+ P+Y+T   +L  CS      +       + K +G + +      ++D   K 
Sbjct: 350 MKS-SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD---FTF 177
             LD A ++  EM  + D+V++  L+ G  +   N   +  +   + +   P D   +T 
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRN-MVLAEYAAKKVIALDPEDAGTYTL 466

Query: 178 AAALSA------------------GV----GLADIALGRQVHAFVVKTNFVENVFVANAL 215
            + + A                  G+    G + I + +Q+HAF++  N    +      
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI------ 520

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           +++  K + ++      G +PE + V  ++        EQ ++SL+   E     F    
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLE------GEQMEDSLRHHSEKLALAFGLMT 574

Query: 276 FPFSTLLSVVAN 287
            P   ++ +  N
Sbjct: 575 LPIEKVIRIRKN 586


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/810 (29%), Positives = 413/810 (50%), Gaps = 94/810 (11%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           T+ +++  +   NL  A ++ +   +  ++ W  L+    ++   +E  + +  M T G 
Sbjct: 70  TSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQG- 128

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
              D  TF  L+  C +        +VH  I+K G+     + N+L+  Y K   L    
Sbjct: 129 VLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVC 188

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F++M  +D +S+N +I+ +  +G+  EA+ LF EM   G  P + T  + +S    L 
Sbjct: 189 QLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLK 248

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSK-------H-----------DCVV---- 226
           D+ +G+++H ++V         + N L+D+YSK       H           D V+    
Sbjct: 249 DLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTL 308

Query: 227 -----------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
                      +AR+LF +M E   VS+  M++ Y     Y ESL+LF++++F      +
Sbjct: 309 VSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDE 368

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA------ 329
               T+LS   +  D  +GR +H   +    + +  + N+L+D+YAKCG+ +EA      
Sbjct: 369 VALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQ 428

Query: 330 -------------------------KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
                                    ++ F  +     V W  M++AYV+     E+  +F
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
            +M  +N+  D+ T  S+L + A++ +L+ G  ++ ++ ++    +   G+AL+DMY K 
Sbjct: 489 CKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKC 548

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
           G ++ A + F ++ E+N+  W A+++A A  G A   +  + +M + G +PD V+ +++L
Sbjct: 549 GCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALL 608

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
           +ACSH GL++EG +YFN +   Y + P   HY  MVD+L R G  +E  K + +MP EPD
Sbjct: 609 AACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPD 668

Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
             +WSS++ +CR H N+E A++A  QL +++   + A +V +SNIYA AG+W+ VS+V+ 
Sbjct: 669 VSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGA-HVLLSNIYADAGRWDDVSKVRT 727

Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
            + E GV K   ++ +E    VH F A+               NL+          D  C
Sbjct: 728 KLHETGVPKQPGFTMIEQNGVVHEFVAS---------------NLVS--------ADILC 764

Query: 665 ALHDEDEEIKV-----ESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLI 719
            L D +  + V     ++   HSERLA+AF LIN  E SPI V+ ++R C DCH+ +KLI
Sbjct: 765 MLQDIERRLLVKQELSDTTSQHSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLI 824

Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           S+   REI +RD+ RFH F DG CSC+D+W
Sbjct: 825 SQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 264/568 (46%), Gaps = 73/568 (12%)

Query: 79  LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
           LL  CS      E   +HA +I         I + ++     +  LD A ++     + +
Sbjct: 41  LLKSCS---NIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           S+ +N L+    KEG  +E ++ +  M   G      TF   + A     D+ LG +VH 
Sbjct: 98  SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
            ++K  F  N  + N L+ LYSK   + E  +LF +M   D +S+N MI+CY     Y+E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217

Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
           +L LF E+  +     +    +L+S  A   DL++G+++H   +         + N LVD
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVD 277

Query: 319 MYAKCGRFEE---------------------------------AKEIFANLSHISTVPWT 345
           MY+KCG+ +E                                 A+++F  ++  S V WT
Sbjct: 278 MYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWT 337

Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
            M+S YVQ G   E+L LF +M   N+  D+    ++L A   L    LG+ +H+F++  
Sbjct: 338 TMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY 397

Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM---------------------------- 437
           G + + F G+ALLD+YAK G L +A++TF+++                            
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFF 457

Query: 438 ---PERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
              PE++IVSWN +++A  ++     + + F  M  S  +PD  +L+S+LS+C+  G + 
Sbjct: 458 NKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALN 517

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            G+ + N   +K ++        +++D+  + GC + A ++  Q+  E +  +W++++ +
Sbjct: 518 HGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             +      A +A D   +ME+ R   P
Sbjct: 576 YAMEGQ---ALEAIDLYLEMEE-RGVKP 599



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 245/539 (45%), Gaps = 79/539 (14%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N    N L+  Y K G L    +LF  M  R  +SW  +I  Y  K  +REA  LF +M
Sbjct: 166 RNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM 225

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILI---ICNSLVDSYCK 120
               G  PD +T  +L+S C++        ++H  I+    N + I   + N LVD Y K
Sbjct: 226 LV-SGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVD---NKLWIRGSLLNCLVDMYSK 281

Query: 121 I-----------RC----------------------LDLARRVFKEMPQKDSVSFNALIT 147
                       RC                      +D AR++F +M ++  VS+  +++
Sbjct: 282 CGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMS 341

Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
           G+ + G   E+++LF +M+     P +      LSA V L D  LGR VHAF+V    + 
Sbjct: 342 GYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLV 401

Query: 208 NVFVANALLDLYSK-------------------------------HDCVVEARKLFGEMP 236
           + F+ NALLDLY+K                                  V +AR  F ++P
Sbjct: 402 DGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIP 461

Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
           E D VS+N M+  Y  ++ + ES ++F ++Q +     +    +LLS  A    L  G  
Sbjct: 462 EKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIW 521

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
           ++          +  +  +L+DMY KCG  E A EIF  +   +   WTAM++AY  +G 
Sbjct: 522 VNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQ 581

Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLG----KQLHSFVIRSGFMSNVF 412
             EA++L++EM    +  D  TF ++L A +    +  G     +L SF      +  + 
Sbjct: 582 ALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFY---NIIPTIH 638

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
               ++D+  + G L++ ++  + MP E ++  W++L+ AC  + + +   ++F+ +++
Sbjct: 639 HYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 8/240 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P ++  S N ++ G+ +SG +  AR+ FN + ++  VSW  ++  Y + + F E+F++F
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M++     PD  T  +LLS C++    N  I V+  I K       ++  +L+D Y K
Sbjct: 489 CKMQS-SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGK 547

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
             C+++A  +F ++ +K+   + A++  +A EG   EAI L++EM+  G KP   TF A 
Sbjct: 548 CGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIAL 607

Query: 181 LSAGV--GLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           L+A    GL D       ++ +F    N +  +     ++DL  +   + E  K    MP
Sbjct: 608 LAACSHGGLVDEGYKYFNKLRSFY---NIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 188/463 (40%), Gaps = 77/463 (16%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   ++SGYV+                          GGY     + E+ +LF
Sbjct: 328 MNERSLVSWTTMMSGYVQ--------------------------GGY-----YCESLELF 356

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-------NSIL----- 108
             MR +    PD V   T+LS C   +  +    VHA I+ +G        N++L     
Sbjct: 357 QQMRFE-NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAK 415

Query: 109 -------------IIC------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
                        + C      NS++D +C+   +D AR  F ++P+KD VS+N ++  +
Sbjct: 416 CGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAY 475

Query: 150 AKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
            K  L  E+ ++F +MQ    KP   T  + LS+   +  +  G  V+ ++ K     + 
Sbjct: 476 VKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDA 535

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
            +  AL+D+Y K  CV  A ++F ++ E +   +  M+  YA   Q  E++ L+ E++  
Sbjct: 536 MLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEER 595

Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT-IVTTAISEVKVANSLVDMYAKCGRFEE 328
                   F  LL+  ++   +  G +   +       I  +     +VD+  + G  EE
Sbjct: 596 GVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEE 655

Query: 329 AKEIFANLSHISTVP-WTAMISAYVQKGNLEEALNLFIEMCR------------ANISAD 375
             +    +     V  W++++ A     N+E A   F ++              +NI AD
Sbjct: 656 TVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYAD 715

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
              +  + +   +L    + KQ    +I    + + F  S L+
Sbjct: 716 AGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLV 758


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/646 (34%), Positives = 374/646 (57%), Gaps = 6/646 (0%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           LI+ Y K      AR++F+++  +  + W  ++G YSQ        +LF+DM    G  P
Sbjct: 258 LINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDM-ISCGIHP 316

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T+ ++LS C+  +      Q+H+ IIK  + S L + N+L+D Y K   L  A + F
Sbjct: 317 DEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHF 376

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           + M  +D +S+NA+I G+ +E +   A  LF  M   G  P + + A+ LSA   +  + 
Sbjct: 377 EHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLE 436

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
            G+Q H   VK     N+F  ++L+D+YSK   + +A K +  MPE   VS N +I  YA
Sbjct: 437 AGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYA 496

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             +  KES+ L  E+Q      S+  F++L+ V      + +G QIH   +    +   +
Sbjct: 497 L-KNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSE 555

Query: 312 -VANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            +  SL+ MY    R  +A  +F+  S + S V WTA+IS ++Q    + ALNL+ EM  
Sbjct: 556 FLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRD 615

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
            NIS DQATF ++L+A A L+SL  G+++HS +  +GF  +  + SAL+DMYAK G +K 
Sbjct: 616 NNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKS 675

Query: 430 AIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           ++Q F+E+  +++++SWN++I   A+NG A+  LK F++M QS   PD V+ L VL+ACS
Sbjct: 676 SVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACS 735

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H G + EG Q F+ M   Y + P+ +HYA MVD+L R G   EAE+ + ++  EP+ ++W
Sbjct: 736 HAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIW 795

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
           ++++ +CRIH + +  ++AA +L ++E  + ++PYV +SN+YA +G W+    +++ M +
Sbjct: 796 ANLLGACRIHGDEKRGQRAAKKLIELEP-QSSSPYVLLSNMYAASGNWDEARSLRRTMIK 854

Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
           + ++K+   SW+ +  + ++F A D  H   +EI + +++L   +K
Sbjct: 855 KDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIK 900



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/630 (27%), Positives = 299/630 (47%), Gaps = 77/630 (12%)

Query: 12  LISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           LI  Y K  +L  AR +F S        VSWT LI GY Q     EA  +F  MR    +
Sbjct: 88  LIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNS--A 145

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD V   T+L                                   ++Y  +  LD A +
Sbjct: 146 VPDQVALVTVL-----------------------------------NAYISLGKLDDACQ 170

Query: 130 VFKEMPQ--KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           +F++MP   ++ V++N +I+G AK    EEA+  F +M   G K S  T A+ LSA   L
Sbjct: 171 LFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASL 230

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           A +  G  VHA  +K  F  +++VA++L+++Y K     +AR++F  + + + + +N M+
Sbjct: 231 AALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAML 290

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             Y+ N      ++LF ++        +F ++++LS  A    L++GRQ+H+  I     
Sbjct: 291 GVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFT 350

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           S + V N+L+DMYAK G  +EA + F ++++   + W A+I  YVQ+     A +LF  M
Sbjct: 351 SNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRM 410

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
               I  D+ + ASIL A   +  L  G+Q H   ++ G  +N+F+GS+L+DMY+K G +
Sbjct: 411 ILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDI 470

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           KDA +T+  MPER++VS NALI+  A   + + ++    +M   G +P  ++  S++  C
Sbjct: 471 KDAHKTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVC 529

Query: 488 S-----------HCGLIEEGL-------------QYFNS--------MTQKYKLRPKKEH 515
                       HC +++ GL              Y +S        +  ++        
Sbjct: 530 KGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVM 589

Query: 516 YASMVDILCRSGCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
           + +++    ++ C D A  L  +M      PD+  + +V+ +C +  +L   ++    +F
Sbjct: 590 WTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIF 649

Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
                 D     A+ ++YA  G  +S  QV
Sbjct: 650 HTGFDLDELTSSALVDMYAKCGDVKSSVQV 679



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/479 (31%), Positives = 241/479 (50%), Gaps = 41/479 (8%)

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           + G  PD  TFA  LS C++    +    VH+ +IK G  S      +L+  Y K   L 
Sbjct: 40  NSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLT 99

Query: 126 LARRVFKE--MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
            AR +F     P   +VS+ ALI+G+ + GL  EA+ +F +M++    P        L+ 
Sbjct: 100 CARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLN- 157

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV--DGV 241
               A I+LG+                     LD         +A +LF +MP    + V
Sbjct: 158 ----AYISLGK---------------------LD---------DACQLFQQMPIPIRNVV 183

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++NVMI+ +A    Y+E+L  F ++       S+   +++LS +A+   L  G  +H   
Sbjct: 184 AWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHA 243

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I     S + VA+SL++MY KC   ++A+++F  +S  + + W AM+  Y Q G L   +
Sbjct: 244 IKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVM 303

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
            LF++M    I  D+ T+ SIL   A    L +G+QLHS +I+  F SN+F  +AL+DMY
Sbjct: 304 ELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMY 363

Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
           AK+G+LK+A + F+ M  R+ +SWNA+I    Q          F  M+  G  PD VSL 
Sbjct: 364 AKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLA 423

Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
           S+LSAC +  ++E G Q F+ ++ K  L       +S++D+  + G   +A K  + MP
Sbjct: 424 SILSACGNIKVLEAG-QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 242/486 (49%), Gaps = 9/486 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N    N LI  Y K+G L  A + F  M  R  +SW  +I GY Q+     AF LF  M 
Sbjct: 352 NLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMI 411

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G  PD V+ A++LS C          Q H   +K G  + L   +SL+D Y K   +
Sbjct: 412 LD-GIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDI 470

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             A + +  MP++  VS NALI G+A +   +E+I L  EMQ LG KPS+ TFA+ +   
Sbjct: 471 KDAHKTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVC 529

Query: 185 VGLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VS 242
            G A + LG Q+H  +VK   +  + F+  +LL +Y     + +A  LF E   +   V 
Sbjct: 530 KGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVM 589

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I+ +  NE    +L L+RE++       Q  F T+L   A    L  GR+IH+   
Sbjct: 590 WTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIF 649

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEEAL 361
            T    +   +++LVDMYAKCG  + + ++F  L +    + W +MI  + + G  + AL
Sbjct: 650 HTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCAL 709

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDM 420
            +F EM ++ I+ D  TF  +L A +    +  G+Q+   ++   G    V   + ++D+
Sbjct: 710 KVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDL 769

Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
             + G LK+A +   ++  E N + W  L+ AC  +GD +   ++ + +++   +P S S
Sbjct: 770 LGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE--LEPQSSS 827

Query: 480 LLSVLS 485
              +LS
Sbjct: 828 PYVLLS 833



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 192/402 (47%), Gaps = 42/402 (10%)

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
           +E  ++ +    + G  P  FTFA  LSA   L ++ LGR VH+ V+K+      F   A
Sbjct: 28  SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGA 87

Query: 215 LLDLYSKHDCVVEARKLFGE--MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           L+ LY+K + +  AR +F     P +  VS+  +I+ Y       E+L +F +++     
Sbjct: 88  LIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR----- 142

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
            S  P    L  V N                                Y   G+ ++A ++
Sbjct: 143 NSAVPDQVALVTVLNA-------------------------------YISLGKLDDACQL 171

Query: 333 FANLSHI--STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
           F  +     + V W  MIS + +  + EEAL  F +M +  + + ++T AS+L A A LA
Sbjct: 172 FQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLA 231

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L+ G  +H+  I+ GF S+++  S+L++MY K     DA Q F  + ++N++ WNA++ 
Sbjct: 232 ALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLG 291

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             +QNG     ++ F DM+  G  PD  +  S+LS C+    +E G Q  +++ +K +  
Sbjct: 292 VYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKK-RFT 350

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
                  +++D+  ++G   EA K    M +  D I W+++I
Sbjct: 351 SNLFVNNALIDMYAKAGALKEAGKHFEHMTYR-DHISWNAII 391


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/609 (36%), Positives = 346/609 (56%), Gaps = 58/609 (9%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDL--YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
           +Q+HA ++KT  + +   A  LL     S H  +  ARK+F  M   +  SYN +I   +
Sbjct: 28  KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 87

Query: 252 WNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH----------TQ 300
            +    ++L +F E+ +    + + F F ++         L+ GRQ+H           +
Sbjct: 88  ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 147

Query: 301 TIVTTAI------------------------------------SEVKVANSLVDMYAKCG 324
            +V+  +                                     +V + N ++D Y + G
Sbjct: 148 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIG 207

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E A+ +F  +   S V W  MI+ Y Q G+ +EA+ +F EM  A +  +  T  S+L 
Sbjct: 208 ELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLP 267

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A + L +L LGK +H + +R+    +   GSAL+DMYAK GS++ A+Q F+ +P+RN+V+
Sbjct: 268 AMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVT 327

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           W+ +I+  A +G A+ TL  FEDM ++G  P  V+ + +LSACSH GL+ EG  +F+ M 
Sbjct: 328 WSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMV 387

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
           +   L P+ EHY  MVD+L R+G  +E+E+L+  MP +PD+++W +++ +C++H N+E  
Sbjct: 388 RVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMG 447

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           K+ A+ L ++    D+  YVA+SNIYA  G WE V++V+  M+E  VRK    SW+EL  
Sbjct: 448 KRVAEHLMELAP-HDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDG 506

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKE----GYKPDTSCALHDEDEEIKVESLKY 680
            +H F   D+ HP++    +KI +++QEM +     GY+P+T+  L + DEE K  SL Y
Sbjct: 507 VIHEFLVEDDSHPKS----KKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNY 562

Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
           HSE++AIAF LI+T   +P+ + KNLR C DCH++IKLISKI  R+I VRD  RFHHF +
Sbjct: 563 HSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVN 622

Query: 741 GFCSCRDFW 749
           G CSC D+W
Sbjct: 623 GSCSCMDYW 631



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 199/434 (45%), Gaps = 51/434 (11%)

Query: 88  TANELIQVHADIIKFGYNSILIICNSLV--DSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
           T  +L Q+HA +IK       +    L+   +    R LD AR++F+ M + +  S+N L
Sbjct: 23  TMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTL 82

Query: 146 ITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           I   ++     +A+ +F+EM +    +P+ FTF +   A      +  GRQVH   VK  
Sbjct: 83  IRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFG 142

Query: 205 ---------------------------FVENVFVA-------------------NALLDL 218
                                      F   VFV                    N ++D 
Sbjct: 143 LDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDG 202

Query: 219 YSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
           Y +   +  AR LF EMP+   VS+NVMI  YA +  +KE++++FRE+Q      +    
Sbjct: 203 YVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTL 262

Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
            ++L  ++    L++G+ +H   +      +  + ++L+DMYAKCG  E+A ++F  L  
Sbjct: 263 VSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPK 322

Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
            + V W+ +I+     G  ++ L+ F +M RA +     T+  +L A +    ++ G+  
Sbjct: 323 RNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWF 382

Query: 399 HSFVIR-SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNG 456
              ++R SG    +     ++D+  ++G L+++ +    MP + + V W AL+ AC  +G
Sbjct: 383 FDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHG 442

Query: 457 DAQATLKSFEDMVQ 470
           + +   +  E +++
Sbjct: 443 NVEMGKRVAEHLME 456



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 180/386 (46%), Gaps = 48/386 (12%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           +L  AR++F SM      S+  LI   S+ N   +A  +F++M  D   +P+  TF ++ 
Sbjct: 60  DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVF 119

Query: 81  SGCSEPDTANELIQVHADIIKFGYNS---------------------------------- 106
             C   +   E  QVH   +KFG +S                                  
Sbjct: 120 KACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC 179

Query: 107 ------------ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
                        +++ N ++D Y +I  L++AR +F EMPQ+  VS+N +I G+A+ G 
Sbjct: 180 DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGH 239

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
            +EA+++F EMQ     P+  T  + L A   L  + LG+ VH + V+ N   +  + +A
Sbjct: 240 FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 299

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L+D+Y+K   + +A ++F  +P+ + V+++ +I   A + + K++L  F +++      S
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIF 333
              +  LLS  ++   +  GR      +  + +   ++    +VD+  + G  EE++E+ 
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419

Query: 334 ANLS-HISTVPWTAMISAYVQKGNLE 358
            N+      V W A++ A    GN+E
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVE 445



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 1/205 (0%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           + + V  N++I GYV+ G L  AR LF+ M  R+ VSW ++I GY+Q   F+EA ++F +
Sbjct: 190 DGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFRE 249

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M+      P+YVT  ++L   S          VH   ++       ++ ++L+D Y K  
Sbjct: 250 MQM-AEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCG 308

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            ++ A +VF+ +P+++ V+++ +I G A  G  ++ +  F +M+  G  PSD T+   LS
Sbjct: 309 SIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLS 368

Query: 183 AGVGLADIALGRQVHAFVVKTNFVE 207
           A      +  GR     +V+ + +E
Sbjct: 369 ACSHAGLVNEGRWFFDHMVRVSGLE 393


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/691 (34%), Positives = 353/691 (51%), Gaps = 66/691 (9%)

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  A  +F  MP    +   AL   F      +  I L+  M  +   P  FTF      
Sbjct: 53  LRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKC 112

Query: 184 -GVGLADIALGRQVHAFVVKTNFVENV-FVANALLDLYS--------------------- 220
              G A + LGR +HA   +T     V  +A+ ++ +Y+                     
Sbjct: 113 CARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVV 172

Query: 221 ----------KHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
                     K   + +AR+L    P  + V++  +I+ Y+   +  E++  F  +    
Sbjct: 173 AWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDG 232

Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
               +     +LS      DL  G  +H        +   K+  +L+DMYAKCG    A+
Sbjct: 233 IAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAR 292

Query: 331 EIFANLSH-ISTVPWTAMI-------------------------------SAYVQKGNLE 358
           E+F  L       PW AMI                               + Y+  G L 
Sbjct: 293 EVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLR 352

Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
           EAL LF +M R  + AD  T   +L ASA L +L  G+ LH+ + +     +V+ G+ALL
Sbjct: 353 EALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALL 412

Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSV 478
           DMY K G +++A+  FK+M  R++ +W+A+I   A NG  +A L+ F  M   G+  +SV
Sbjct: 413 DMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSV 472

Query: 479 SLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
           + ++VL+ACSH  L++EG  YF+ M   + +RP+ EHY  M+D+L RSG  DEA  L+  
Sbjct: 473 TYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQT 532

Query: 539 MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWES 598
           MP +P+ ++W+S++++CR+HKN++ A+ AA  L K+E   DA  YV M NIY  + QWE 
Sbjct: 533 MPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAV-YVQMYNIYIDSRQWED 591

Query: 599 VSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGY 658
            S++++ M +RGV+K   YS + +  +VH F   D  HPQ  EI   +E + + +K  GY
Sbjct: 592 ASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGY 651

Query: 659 KPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKL 718
            P TS    D DEE K ++L  HSE+LAIAF L++     P+ ++KNLR C DCH+AIKL
Sbjct: 652 SPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKL 711

Query: 719 ISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           IS++  REI VRD SRFHHF+ G CSC DFW
Sbjct: 712 ISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 205/457 (44%), Gaps = 58/457 (12%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ V+   +ISG  K G L  AR L      R  V+WT LI GYS+  +  EA   F  M
Sbjct: 169 KDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSM 228

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVH----------ADIIKFGYNSILIIC-- 111
            +DG + PD VT   +LS C +    N    +H          +D +      +   C  
Sbjct: 229 LSDGIA-PDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGD 287

Query: 112 --------------------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
                               N+++D YCK+  +D+AR +F +M   D ++FN+LITG+  
Sbjct: 288 TGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIH 347

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            G   EA+ LF +M+  G    +FT    L+A   L  +  GR +HA + +     +V++
Sbjct: 348 GGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYL 407

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             ALLD+Y K   V EA   F +M   D  +++ MI   A+N   K +L+ F  ++   F
Sbjct: 408 GTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGF 467

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAK 330
             +   +  +L+  ++   L  GR    +  +   I  +++    ++D+  + G  +EA 
Sbjct: 468 HANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAM 527

Query: 331 EIFANLS-HISTVPWTAMISAYVQKGNLEEALN--------------LFIEMCRANISAD 375
           ++   +    + V W +++SA     N++ A N              ++++M    I + 
Sbjct: 528 DLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSR 587

Query: 376 QATFASILR---------ASAELASLSLGKQLHSFVI 403
           Q   AS +R          +A  +S+++  Q+H F++
Sbjct: 588 QWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIV 624



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 182/420 (43%), Gaps = 44/420 (10%)

Query: 76  FATLLSGCSEPDTANELIQVHADI-------IKFGYNSI--LIICNSLVDSYCKIRCLDL 126
           F TLL   + P  A+ +I ++A++         F   S+  ++   +++    K+  LD 
Sbjct: 131 FRTLLPS-AVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDD 189

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+    P ++ V++  LI+G+++ G   EA+  F  M   G  P + T    LSA   
Sbjct: 190 ARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQ 249

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD----------------------- 223
           L D+  G  +H  V     + +  +  AL+D+Y+K                         
Sbjct: 250 LKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNA 309

Query: 224 -----CVVE----ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
                C V     AR LF +M + D +++N +IT Y    + +E+L LF +++       
Sbjct: 310 MIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGAD 369

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
            F    LL+  A+   L  GR +H          +V +  +L+DMY KCGR EEA   F 
Sbjct: 370 NFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFK 429

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +S      W+AMI      G  + AL  F  M      A+  T+ ++L A +    L  
Sbjct: 430 QMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDE 489

Query: 395 GK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G+       +       +     ++D+  +SG L +A+   + MP + N V W +++SAC
Sbjct: 490 GRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSAC 549


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/612 (35%), Positives = 342/612 (55%), Gaps = 35/612 (5%)

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAAALSAGVGL 187
           V    P + +V FN L+ G     L+ +A+ LF  M+  G    P  +T+  AL +    
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
             + LGRQ+H+   +     NVFVA++ + +Y++     +A ++F EM   D VS+N MI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
           + +A    +  ++ +FREL               +++   K D        T   +  ++
Sbjct: 196 SGFAHAGLFGRAMDVFREL---------------VALQCPKPDAG------TMASILPSM 234

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
            + +V     D+    G F+E +  F  L     + W AM++ Y       EA+ LF+ M
Sbjct: 235 GKARVE----DIALLKGVFDEMR--FKGL-----ISWNAMLAVYTNNEMHVEAVELFMRM 283

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
            +  I  D  T A++L +  E+++LSLGK++H  + R    S++   +AL+DMYA  G L
Sbjct: 284 QKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCL 343

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K+A   F  M  R++VSW ++ISA  ++G  +  +  FE M   G +PDS++ +++L+AC
Sbjct: 344 KEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAAC 403

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL++ G  YF SMT ++ + PK EHYA MVD+L R+GC  EA   +  MP +P+E +
Sbjct: 404 SHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERV 463

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +CRIH N++    AAD L ++   +    YV +SNIYA AG+W  VS V+  M 
Sbjct: 464 WGALLGACRIHSNMDIGLLAADSLLRLAP-KQTGYYVLLSNIYARAGRWADVSMVRSVME 522

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            +G++K+   S  EL  +VH F   D  HPQ+  I +K+  L++ +++ GY P+    LH
Sbjct: 523 SKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLH 582

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           D +EE K   L  HSE+LAIAF LINT  G+PI +  NLR C+DCH A KLIS I GREI
Sbjct: 583 DVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREI 642

Query: 728 TVRDSSRFHHFK 739
            ++D +R H+ K
Sbjct: 643 ILKDVNRIHYMK 654



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 216/454 (47%), Gaps = 40/454 (8%)

Query: 28  LFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD-PDYVTFATLLSGCSEP 86
           + ++  DRT V + +L+ G +  +  R+A  LF  MR  G +  PD+ T+   L  C+  
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 87  DTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI 146
           D      Q+H+   + G +  + + +S +  Y +    D A ++F+EM  +D VS+NA+I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
           +GFA  GL   A+ +F E+  L     D    A++   +G A                 V
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKAR----------------V 239

Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
           E++    ALL            + +F EM     +S+N M+  Y  NE + E+++LF  +
Sbjct: 240 EDI----ALL------------KGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRM 283

Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
           Q    +      +T+L        L +G++IH         S + + N+L+DMYA CG  
Sbjct: 284 QKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCL 343

Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
           +EA+++F ++     V WT++ISAY + G+  EA++LF +MC   +  D   F +IL A 
Sbjct: 344 KEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAAC 403

Query: 387 AELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVS 444
           +    L +GK   +S          +   + ++D+  ++G +++A      MP + N   
Sbjct: 404 SHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERV 463

Query: 445 WNALISACAQNGDAQATLKSFEDMV-----QSGY 473
           W AL+ AC  + +    L + + ++     Q+GY
Sbjct: 464 WGALLGACRIHSNMDIGLLAADSLLRLAPKQTGY 497



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 2/236 (0%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+  T+++ +   G  +  ++A  + +F+ M  +  +SW  ++  Y+      EA +LF+
Sbjct: 222 PDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFM 281

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            M+ D G +PD VT AT+L  C E    +   ++H  I +    S +++ N+L+D Y   
Sbjct: 282 RMQKD-GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANC 340

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
            CL  AR VF  M  +D VS+ ++I+ + + G   EAI LF +M   G +P    F A L
Sbjct: 341 GCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAIL 400

Query: 182 SAGVGLADIALGRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +A      + +G+   ++   + +    +     ++DL  +  C+ EA      MP
Sbjct: 401 AACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMP 456


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 252/803 (31%), Positives = 403/803 (50%), Gaps = 127/803 (15%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  Y ++G +  AR +F+ M +R   SWT ++  Y     + E  KLF  M  +G   P
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRP 188

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D+  F  +   CSE         V+  ++  G+     +  S++D + K   +D+ARR F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248

Query: 132 KEMPQK-----------------------------------DSVSFNALITGFAKEGLNE 156
           +E+  K                                   D V++NA+I+G+A+ G  E
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308

Query: 157 EAIKLFVEMQHL------------------------------------GFKPSDFTFAAA 180
           EA K F+EM  L                                    G KP+  T A+A
Sbjct: 309 EASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASA 368

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           +SA   L+ +  GR++H + +K   ++ ++ V N+L+D Y+K   V  AR+ FG + + D
Sbjct: 369 VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD 428

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQF--------------TRF-------------- 271
            VS+N M+  YA    ++E+++L  E++F              T F              
Sbjct: 429 LVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQ 488

Query: 272 -------DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
                  D +    S  L+      +L++G++IH   +         V ++L+ MY+ C 
Sbjct: 489 RMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCD 548

Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR 384
             E A  +F+ LS    V W ++ISA  Q G    AL+L  EM  +N+  +  T  S L 
Sbjct: 549 SLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 608

Query: 385 ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
           A ++LA+L  GK++H F+IR G  +  F  ++L+DMY + GS++ + + F  MP+R++VS
Sbjct: 609 ACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS 668

Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
           WN +IS    +G     +  F+     G +P+ ++  ++LSACSH GLIEEG +YF  M 
Sbjct: 669 WNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMK 728

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
            +Y + P  E YA MVD+L R+G F+E  + + +MPFEP+  +W S++ +CRIH N + A
Sbjct: 729 TEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 788

Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
           + AA  LF++E  + +  YV M+NIY+ AG+WE  ++++  M+ERGV K    SW+E+K 
Sbjct: 789 EYAARYLFELEP-QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847

Query: 625 KVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSER 684
           K+H F   D  HP           LM+++  +  K D      DEDE  K  SL  HSE+
Sbjct: 848 KLHSFVVGDTSHP-----------LMEQISGKDGKLDV-----DEDE--KEFSLCGHSEK 889

Query: 685 LAIAFALINTPEGSPILVMKNLR 707
           +A+AF LI+T  G+P+ ++KNLR
Sbjct: 890 IALAFGLISTTXGTPLRIIKNLR 912



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 244/534 (45%), Gaps = 88/534 (16%)

Query: 69  SDPDYVT--FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           ++PD     +A++L  C +        QVHA ++  G +    + + L++ YC+  C++ 
Sbjct: 83  TNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED 142

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+F +M +++  S+ A++  +   G  EE IKLF  M + G +P  F F     A   
Sbjct: 143 ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 202

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           L +  +G+ V+ +++   F  N  V  ++LD++ K   +  AR+ F E+   D   +N+M
Sbjct: 203 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 262

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           ++ Y    ++K++LK   +++ +     Q  +                            
Sbjct: 263 VSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------------- 294

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI-----STVPWTAMISAYVQKGNLEEAL 361
                  N+++  YA+ G+FEEA + F  +  +     + V WTA+I+   Q G   EAL
Sbjct: 295 -------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347

Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM-SNVFSGSALLDM 420
           ++F +M    +  +  T AS + A   L+ L  G+++H + I+   + S++  G++L+D 
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDY 407

Query: 421 YAKS-------------------------------GSLKDAIQTFKEMP----ERNIVSW 445
           YAK                                GS ++AI+   EM     E +I++W
Sbjct: 408 YAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITW 467

Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
           N L++   Q GD +A L+ F+ M   G  P++ ++   L+AC     ++ G +       
Sbjct: 468 NGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE-----IH 522

Query: 506 KYKLRPKKEHYASMVDILCR--SGC--FDEAEKLMAQMPFEPDEIMWSSVINSC 555
            Y LR   E    +   L    SGC   + A  + +++    D ++W+S+I++C
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISAC 575



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 214/475 (45%), Gaps = 31/475 (6%)

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEA--------RKLFGEMPEVDGVSYNVMITCY 250
           F + +NF       + L  L +++ C+V +        RKL      + G S    +   
Sbjct: 8   FALNSNFAIQPKGTSPLQTLPTRNCCIVASTNTKTQNLRKLTNARQRITGFSGGGSV--- 64

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N     +  L   +  T  D     ++++L       +L++G Q+H Q +V       
Sbjct: 65  HRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            + + L+++Y + G  E+A+ +F  +S  +   WTA++  Y   G+ EE + LF  M   
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D   F  + +A +EL +  +GK ++ +++  GF  N     ++LDM+ K G +  A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
            + F+E+  +++  WN ++S     G+ +  LK   DM  SG +PD V+  +++S  +  
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQS 304

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIM 547
           G  EE  +YF  M      +P    + +++    ++G   EA  +  +M  E   P+ I 
Sbjct: 305 GQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
            +S +++C     L   ++      K+E+L D+   V  S    +   +     V+ A R
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEEL-DSDLLVGNS----LVDYYAKCRSVEVARR 419

Query: 608 ERG-VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
           + G +++    SW  + +   +  +++E           IE L+ EMK +G +PD
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEE----------AIE-LLSEMKFQGIEPD 463



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 206/447 (46%), Gaps = 49/447 (10%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + VS N +++GY   G+   A EL + M    ++   ++W  L+ G++Q    + A + F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M + G  DP+  T +  L+ C +        ++H  +++        + ++L+  Y  
Sbjct: 488 QRMHSMG-MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSG 546

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              L++A  VF E+  +D V +N++I+  A+ G +  A+ L  EM     + +  T  +A
Sbjct: 547 CDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSA 606

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   LA +  G+++H F+++       F+ N+L+D+Y +   + ++R++F  MP+ D 
Sbjct: 607 LPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL 666

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG----RQ 296
           VS+NVMI+ Y  +    +++ LF+  +      +   F+ LLS  ++   ++ G    + 
Sbjct: 667 VSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM 726

Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
           + T+  +  A+ +      +VD+ ++ G+F E  E    +    +   W +++ A     
Sbjct: 727 MKTEYAMDPAVEQYAC---MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA----- 778

Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
                       CR + + D A +A+  R   EL   S G  +         M+N+    
Sbjct: 779 ------------CRIHCNPDLAEYAA--RYLFELEPQSSGNYV--------LMANI---- 812

Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNI 442
                Y+ +G  +DA +    M ER +
Sbjct: 813 -----YSAAGRWEDAAKIRCLMKERGV 834


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/579 (37%), Positives = 323/579 (55%), Gaps = 2/579 (0%)

Query: 172 PSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
           PS  T   AL +   L   +  G Q+HA  +K     N  V  +LL LY+K   +  A++
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           +F EMP    V +  +IT Y      +E++ + R           F    +L+  A   D
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L  G  +            V VA + VD+Y KCG   +A+E+F  + H   V W AM+  
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           Y   G+  EAL+LF+ M    +  D    A  L A   L +L LG+Q    V    F+ N
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
              G+AL+DMYAK GS  +A   F++M +++I+ WNA+I      G  +        M +
Sbjct: 308 PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 367

Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
           SG + +  + + +L +C+H GLI++G +YF++MT+ Y + P+ EHY  MVD+L R+G   
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 427

Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
           EA +L+  MP   + ++  +++  C+IH+N E A+    QL  +E   ++  YV +SNIY
Sbjct: 428 EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPW-NSGNYVMLSNIY 486

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
           +  G+WE  ++++  M+ +GV KV A SWVE + KVH F   D+ HP +++I +K++ L 
Sbjct: 487 SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 546

Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
            EMK  GY+P T   + D ++E K  +L +HSE+LAIAF L+ T  G  I V KNLR C+
Sbjct: 547 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 606

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH AIKL+S+IT REI VRD++RFH F+DG CSC D+W
Sbjct: 607 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 7/388 (1%)

Query: 70  DPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P ++T    L   S    P  A E  Q+HA  +K   ++   +  SL+  Y K   L  
Sbjct: 67  NPSHLTIPIALKSASRLPHPLRAGE--QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHR 124

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+RVF EMP   +V + ALIT +   G   EA+ +       G +P  FT    L+A   
Sbjct: 125 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 184

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +AD+A G  V     +    ++VFVA A +DLY K   + +AR++F +M   D V++  M
Sbjct: 185 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 244

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N   +E+L LF  +Q        +  +  LS       L +GRQ          
Sbjct: 245 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 304

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +    +  +L+DMYAKCG   EA  +F  +     + W AMI      G+ + A  L  +
Sbjct: 305 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 364

Query: 367 MCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M ++ +  +  TF  +L +      +  G++  H+          +     ++D+ +++G
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 424

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L++A Q   +MP   N V   AL+  C
Sbjct: 425 LLQEAHQLVDDMPMPANAVILGALLGGC 452



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 10/347 (2%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G L  A+ +F+ M   + V WT LI  Y      REA  +  +   + G  P
Sbjct: 112 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRP 170

Query: 72  DYVTFATLLSGCSE-PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T   +L+ C+   D A  E +   A+  + G    + +  + VD Y K   +  AR 
Sbjct: 171 DSFTAVRVLTACARIADLATGETVWRAAE--QEGVAQSVFVATAAVDLYVKCGEMAKARE 228

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KD+V++ A++ G+A  G   EA+ LF+ MQ  G KP  +  A ALSA   L  
Sbjct: 229 VFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGA 288

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ    V    F++N  +  AL+D+Y+K    VEA  +F +M + D + +N MI  
Sbjct: 289 LDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 348

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
                  K +  L  +++ +    +   F  LL    +   +Q GR+  H  T +     
Sbjct: 349 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 408

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
            ++    +VD+ ++ G  +EA ++  ++     +P  A+I   +  G
Sbjct: 409 RIEHYGCMVDLLSRAGLLQEAHQLVDDMP----MPANAVILGALLGG 451


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/653 (33%), Positives = 367/653 (56%), Gaps = 4/653 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N +++ Y K  +L  A+++F++M +R  VSWT +I GYSQ  Q   A + +  M    G 
Sbjct: 102 NHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQM-LQSGV 160

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            PD  TF +++  CS         Q+HA ++K  + + +I  N+L+  Y K   +  A  
Sbjct: 161 MPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALD 220

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLA 188
           VF  M  +D +S+ ++I GF++ G   EA+  F EM H G + P++F F +  SA   L 
Sbjct: 221 VFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLL 280

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
               GRQ+H   +K     +VF   +L D+Y+K   +  AR +F ++   D V++N +I 
Sbjct: 281 QPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIA 340

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
            +A+    KE++  F +++       +    +LL    +  +L  G Q+H          
Sbjct: 341 GFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDL 400

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +V V N+L+ MYAKC    +A   F  +  +   V W A+++A ++    EE   L   M
Sbjct: 401 DVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLM 460

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
           C +    D  T  ++L ASAE  S+ +G Q+H + +++G   +    + L+D+YAK GSL
Sbjct: 461 CISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSL 520

Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
           K A + F  M   ++VSW++LI   AQ G  +  LK F+ M +   +P+ V+ + VL+AC
Sbjct: 521 KTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC 580

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+EEG + + +M +++ + P +EH + MVD+L R+GC +EAE  + QM F+PD ++
Sbjct: 581 SHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVV 640

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++ +C+ H N++  K+AA+ + K++   ++A +V + NIYA  G WE V++++  M+
Sbjct: 641 WKTLLAACKTHGNVDVGKRAAENILKIDP-SNSAAHVLLCNIYASKGNWEDVARLRSLMK 699

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
           +RGVRKV   SW+E+K ++HVF   D LHP+ N+I   +E L+ +M   GY P
Sbjct: 700 QRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 752



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 275/536 (51%), Gaps = 8/536 (1%)

Query: 49  QKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSIL 108
           ++  F EA K F  ++   G      T+A L+S CS   +     ++H  ++K   +  L
Sbjct: 39  KQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDL 98

Query: 109 IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL 168
            + N +++ Y K + L  A++VF  MP+++ VS+ ++I G+++ G    A++ + +M   
Sbjct: 99  TLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQS 158

Query: 169 GFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEA 228
           G  P  FTF + + A   L DI LGRQ+HA V+K+ F  ++   NAL+ +Y+K + +++A
Sbjct: 159 GVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDA 218

Query: 229 RKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE-LQFTRFDRSQFPFSTLLSVVAN 287
             +F  M   D +S+  MI  ++      E+L  F+E L    +  ++F F ++ S  ++
Sbjct: 219 LDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSS 278

Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
            L  + GRQ+H  +I      +V    SL DMYAKCG    A+ +F  +     V W A+
Sbjct: 279 LLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAI 338

Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
           I+ +   G+ +EA+  F +M    +  D+ T  S+L A    + L  G Q+H ++ + G 
Sbjct: 339 IAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGL 398

Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFE 466
             +V   + LL MYAK   L+DAI  F+EM    ++VSWNA+++AC ++  A+   +  +
Sbjct: 399 DLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLK 458

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M  S ++PD ++L +VL A +    IE G Q  +    K  L         ++D+  + 
Sbjct: 459 LMCISQHRPDYITLTNVLGASAETVSIEIGNQ-VHCYALKTGLNCDTSVTNGLIDLYAKC 517

Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
           G    A K+   M   PD + WSS+I     +    + ++A  +LFK  +  D  P
Sbjct: 518 GSLKTAHKIFDSM-INPDVVSWSSLILG---YAQFGYGEEAL-KLFKTMRRLDVKP 568



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 238/469 (50%), Gaps = 3/469 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + ++ N LIS Y KS  +  A ++F+ M  R  +SW  +I G+SQ     EA   F +M 
Sbjct: 198 HIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEML 257

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   P+   F ++ S CS         Q+H   IKFG    +    SL D Y K   L
Sbjct: 258 HQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLL 317

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
             AR VF ++ + D V++NA+I GFA  G  +EAI  F +M+H G  P + T  + L A 
Sbjct: 318 SCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCAC 377

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSY 243
              +++  G QVH ++ K     +V V N LL +Y+K   + +A   F EM    D VS+
Sbjct: 378 TSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSW 437

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N ++T    ++Q +E  +L + +  ++        + +L   A  + ++IG Q+H   + 
Sbjct: 438 NAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALK 497

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
           T    +  V N L+D+YAKCG  + A +IF ++ +   V W+++I  Y Q G  EEAL L
Sbjct: 498 TGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKL 557

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYA 422
           F  M R ++  +  TF  +L A + +  +  G +L+  + +  G        S ++D+ A
Sbjct: 558 FKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLA 617

Query: 423 KSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           ++G L +A     +M  + +IV W  L++AC  +G+     ++ E++++
Sbjct: 618 RAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILK 666



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 168/313 (53%), Gaps = 4/313 (1%)

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           S N  IT     + + E++K F  LQ  T F  +   ++ L+S  +    L+ G++IH  
Sbjct: 29  SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            + + +  ++ + N +++MY KC   ++A+++F  +   + V WT++I+ Y Q G    A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           L  + +M ++ +  DQ TF SI++A + L  + LG+QLH+ V++S F +++ + +AL+ M
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVS 479
           Y KS  + DA+  F  M  R+++SW ++I+  +Q G     L  F++M+  G Y P+   
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFI 268

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             SV SACS     E G Q  + M+ K+ L        S+ D+  + G    A  +  Q+
Sbjct: 269 FGSVFSACSSLLQPEYGRQ-LHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQI 327

Query: 540 PFEPDEIMWSSVI 552
              PD + W+++I
Sbjct: 328 G-RPDLVAWNAII 339



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 3/153 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N +T  TN LI  Y K G+L TA ++F+SM++   VSW+ LI GY+Q     EA KLF  
Sbjct: 501 NCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKT 560

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
           MR      P++VTF  +L+ CS      E  +++  + K FG       C+ +VD   + 
Sbjct: 561 MRRL-DVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARA 619

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEG 153
            CL+ A     +M    D V +  L+      G
Sbjct: 620 GCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 652


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/615 (37%), Positives = 355/615 (57%), Gaps = 37/615 (6%)

Query: 43  LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
           L+    ++ + REA  +  DM  + G  P   T+ +LL GC    +  +   +HA +I+ 
Sbjct: 35  LVKSLCKQGRLREALHILQDM-VENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93

Query: 103 GYNSILI-ICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKL 161
            +    I + N LV  Y K+  L  ARRVF EMP K+ VS+ A+I  +A+    +EA+  
Sbjct: 94  QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153

Query: 162 FVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK 221
           F EMQ +G +P+ FTFA+ L A     D+ +  + H  +VK  F  NVFV N L+D+Y+K
Sbjct: 154 FYEMQDVGIQPNHFTFASILPA---CTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAK 210

Query: 222 HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL 281
             C+  AR+LF +MP+ D VS+N MI  Y  N   +++LKLF+E+      R    ++T+
Sbjct: 211 RGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTM 266

Query: 282 LSVVANKLDLQ----IGRQIHTQTIVT--TAIS------EVKVA---------------N 314
           ++  A   D++    +  ++  Q +V+  T I+       VK A               N
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWN 326

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           +++  +A+ G+ EEA ++F  +   + V W AMI+ Y Q G  E AL LF +M   ++  
Sbjct: 327 AVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKP 386

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           +  TFA +L A A LA L  G + H  VIRSGF S+V  G+ L+ MYAK GS++DA + F
Sbjct: 387 NTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVF 446

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
             M +++  S +A+I   A NG ++ +L+ FE M  +G +PD V+ + VLSAC H GL++
Sbjct: 447 DRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVD 506

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG QYF+ MT+ Y + P  EHY  M+D+L R+GCFDEA  L+ +MP +PD  MW S++++
Sbjct: 507 EGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSA 566

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKV 614
           CR H N++  +K A  L  +   ++ APYV +SNIYA AG+W+ +  V+  M++R V+K 
Sbjct: 567 CRTHNNIDLGEKVAQHLIALNP-QNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKK 625

Query: 615 TAYSWVELKSKVHVF 629
              SW+ +K +VH F
Sbjct: 626 LGCSWIVIKKQVHAF 640



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 254/515 (49%), Gaps = 38/515 (7%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           Q+    N L+S YVK G+L  AR +F+ M  +  VSWT +I  Y++    +EA   F +M
Sbjct: 98  QDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEM 157

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           + D G  P++ TFA++L  C++ +   E    H +I+K G+ S + + N LVD Y K  C
Sbjct: 158 Q-DVGIQPNHFTFASILPACTDLEVLGEF---HDEIVKGGFESNVFVGNGLVDMYAKRGC 213

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           ++ AR +F +MPQ+D VS+NA+I G+ + GL E+A+KLF E+     K    T+   ++ 
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTMMAG 269

Query: 184 GVGLADIALGRQVHAFVVKTNFV---------------------------ENVFVANALL 216
                D+    ++   + + N V                            NV   NA++
Sbjct: 270 YAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVI 329

Query: 217 DLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
             ++++  V EA KLF  MPE + VS+N MI  Y+ N Q + +LKLF ++Q      +  
Sbjct: 330 SGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTE 389

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            F+ +L   A    L+ G + H   I +   S+V V N+LV MYAKCG  E+A+++F  +
Sbjct: 390 TFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRM 449

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
               +   +AMI  Y   G  +E+L LF +M    +  D+ TF  +L A      +  G+
Sbjct: 450 RQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGR 509

Query: 397 QLHSFVIRSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQ 454
           Q    + R   ++        ++D+  ++G   +A     +MP + +   W +L+SAC  
Sbjct: 510 QYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRT 569

Query: 455 NGDAQATLKSFEDMVQSGYQ-PDSVSLLSVLSACS 488
           + +     K  + ++    Q P    LLS + A +
Sbjct: 570 HNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAA 604



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 237/456 (51%), Gaps = 24/456 (5%)

Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
           + L+    K+G   EA+ +  +M   G  P   T+ + L   +    +   + +HA +++
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 203 TNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
           T F  +++ + N L+ +Y K   +VEAR++F EMP  + VS+  MI  YA +E  +E+L 
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
            F E+Q      + F F+++L       DL++  + H + +     S V V N LVDMYA
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYA 209

Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
           K G  E A+E+F  +     V W AMI+ YVQ G +E+AL LF E+ + ++     T+ +
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITWNT 265

Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
           ++   A+   +    +L   +       N+ S + ++  Y ++GS+K+A + F+ MPERN
Sbjct: 266 MMAGYAQCGDVENAVELFEKMPE----QNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERN 321

Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
           ++SWNA+IS  AQNG  +  LK F+ M +     + VS  ++++  S  G  E  L+ F 
Sbjct: 322 VISWNAVISGFAQNGQVEEALKLFKTMPEC----NVVSWNAMIAGYSQNGQAENALKLFG 377

Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFD---EAEKLMAQMPFEPDEIMWSSVINSCRIH 558
            M Q   ++P  E +A ++         +   EA +++ +  F+ D ++ ++++      
Sbjct: 378 QM-QMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKC 436

Query: 559 KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
            ++E A+K  D++    + +D+A   AM   YA+ G
Sbjct: 437 GSIEDARKVFDRM----RQQDSASLSAMIVGYAING 468



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 194/366 (53%), Gaps = 23/366 (6%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP ++ VS N +I+GYV++G +  A +LF  +  R  ++W  ++ GY+Q      A +LF
Sbjct: 224 MPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELF 283

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M      + + V++ T+++G  +  +  E  +    + +      +I  N+++  + +
Sbjct: 284 EKM-----PEQNLVSWNTMIAGYVQNGSVKEAFK----LFQIMPERNVISWNAVISGFAQ 334

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A ++FK MP+ + VS+NA+I G+++ G  E A+KLF +MQ +  KP+  TFA  
Sbjct: 335 NGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIV 394

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           L A   LA +  G + H  V+++ F  +V V N L+ +Y+K   + +ARK+F  M + D 
Sbjct: 395 LPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDS 454

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ---I 297
            S + MI  YA N   KESL+LF ++QFT     +  F  +LS   +   +  GRQ   I
Sbjct: 455 ASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDI 514

Query: 298 HTQTI-VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYV 352
            T+   +T A+        ++D+  + G F+EA ++   ++ +   P    W +++SA  
Sbjct: 515 MTRFYHITPAMEHY---GCMIDLLGRAGCFDEANDL---INKMPIKPDADMWGSLLSACR 568

Query: 353 QKGNLE 358
              N++
Sbjct: 569 THNNID 574


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/579 (35%), Positives = 338/579 (58%), Gaps = 4/579 (0%)

Query: 174 DFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG 233
           D   ++ ++A      I L R +H  VVK+    + F+ + L+  Y +    V A KLF 
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90

Query: 234 EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR--FDRSQFPFSTLLSVVANKLDL 291
           EMPE D VS+N +I+ Y+      +  ++   +  +   F  ++  F +++S        
Sbjct: 91  EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150

Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
           + GR IH   +    + EVKV N+ ++ Y K G    + ++F +LS  + V W  MI  +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210

Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
           +Q G  E+ L  F    R     DQATF ++LR+  ++  + L + +H  ++  GF  N 
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
              +ALLD+Y+K G L+D+   F E+   + ++W A+++A A +G  +  +K FE MV  
Sbjct: 271 CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G  PD V+   +L+ACSH GL+EEG  YF +M+++Y++ P+ +HY+ MVD+L RSG   +
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A  L+ +MP EP   +W +++ +CR++K+ +   KAA++LF++E  RD   YV +SNIY+
Sbjct: 391 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEP-RDGRNYVMLSNIYS 449

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
            +G W+  S+++  M+++G+ + +  S++E  +K+H F   D  HP++ +I++K++ + +
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 509

Query: 652 EMKKE-GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
           +MK E GYK  T   LHD  E++K E +  HSE++A+AF L+      PI++ KNLR C 
Sbjct: 510 KMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICG 569

Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           DCH   K IS I  R I +RDS RFHHF DG CSC D+W
Sbjct: 570 DCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 202/421 (47%), Gaps = 7/421 (1%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           +H  ++K        I + LV  Y ++     A ++F EMP++D VS+N+LI+G++  G 
Sbjct: 53  LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112

Query: 155 NEEAIKLFVEM--QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
             +  ++   M    +GF+P++ TF + +SA V       GR +H  V+K   +E V V 
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           NA ++ Y K   +  + KLF ++   + VS+N MI  +  N   ++ L  F   +    +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
             Q  F  +L    +   +++ + IH   +         +  +L+D+Y+K GR E++  +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASL 392
           F  ++   ++ WTAM++AY   G   +A+  F  M    IS D  TF  +L A +    +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352

Query: 393 SLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALIS 450
             GK    +   R      +   S ++D+  +SG L+DA    KEMP E +   W AL+ 
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQP-DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           AC    D Q   K+ E + +   +P D  + + + +  S  GL ++  +  N M QK  +
Sbjct: 413 ACRVYKDTQLGTKAAERLFE--LEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470

Query: 510 R 510
           R
Sbjct: 471 R 471



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 168/344 (48%), Gaps = 3/344 (0%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR-TDGG 68
           + L+  Y++ G+   A +LF+ M +R  VSW  LI GYS +    + F++   M  ++ G
Sbjct: 70  DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+ VTF +++S C    +  E   +H  ++KFG    + + N+ ++ Y K   L  + 
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F+++  K+ VS+N +I    + GL E+ +  F   + +G +P   TF A L +   + 
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + L + +H  ++   F  N  +  ALLDLYSK   + ++  +F E+   D +++  M+ 
Sbjct: 250 VVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAI 307
            YA +   ++++K F  +           F+ LL+  ++   ++ G+    T +      
Sbjct: 310 AYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRID 369

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             +   + +VD+  + G  ++A  +   +    S+  W A++ A
Sbjct: 370 PRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 2/145 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N   T  L+  Y K G L  +  +F+ +    +++WT ++  Y+     R+A K F ++ 
Sbjct: 269 NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF-ELM 327

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRC 123
              G  PD+VTF  LL+ CS      E       + K +  +  L   + +VD   +   
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387

Query: 124 LDLARRVFKEMPQKDSVSFNALITG 148
           L  A  + KEMP + S      + G
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALLG 412


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/657 (32%), Positives = 378/657 (57%), Gaps = 10/657 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++     +LI  Y+K GN+  AR +F+++ +++ V+WT +I G  +  +   + +LF  
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  D    PD    +T+LS CS         Q+HA I+++G      + N L+DSY K  
Sbjct: 240 LMEDN-VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A ++F  MP K+ +S+  L++G+ +  L++EA++LF  M   G KP  +  ++ L+
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L  +  G QVHA+ +K N   + +V N+L+D+Y+K DC+ +ARK+F      D V 
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418

Query: 243 YNVMITCYA-----WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           +N MI  Y+     W  +  E+L +FR+++F     S   F +LL   A+   L + +QI
Sbjct: 419 FNAMIEGYSRLGTQW--ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H          ++   ++L+D+Y+ C   ++++ +F  +     V W +M + YVQ+   
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           EEALNLF+E+  +    D+ TFA+++ A+  LAS+ LG++ H  +++ G   N +  +AL
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           LDMYAK GS +DA + F     R++V WN++IS+ A +G+ +  L+  E M+  G +P+ 
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++ + VLSACSH GL+E+GL+ F  M  ++ + P+ EHY  MV +L R+G  ++A +L+ 
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MP +P  I+W S+++ C    N+E A+ AA+    +   +D+  +  +SNIYA  G W 
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAI-LSDPKDSGSFTMLSNIYASKGMWT 774

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
              +V++ M+  GV K    SW+ +  +VH+F + D+ H + N+I   +++L+ +++
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 165/575 (28%), Positives = 294/575 (51%), Gaps = 10/575 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T  +N+LI+ Y ++G +  AR++F  M +R  VSW+ ++   +    + E+  +F++  
Sbjct: 78  DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE--LIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
                 P+    ++ +  CS  D      + Q+ + ++K G++  + +   L+D Y K  
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR VF  +P+K +V++  +I+G  K G +  +++LF ++      P  +  +  LS
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  G+Q+HA +++     +  + N L+D Y K   V+ A KLF  MP  + +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +++ Y  N  +KE+++LF  +         +  S++L+  A+   L  G Q+H  TI
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN---LEE 359
                ++  V NSL+DMYAKC    +A+++F   +    V + AMI  Y + G    L E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           ALN+F +M    I     TF S+LRASA L SL L KQ+H  + + G   ++F+GSAL+D
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           +Y+    LKD+   F EM  +++V WN++ +   Q  + +  L  F ++  S  +PD  +
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
             ++++A  +   ++ G Q F+    K  L        +++D+  + G  ++A K     
Sbjct: 558 FANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
               D + W+SVI+S   H      KKA   L KM
Sbjct: 617 A-SRDVVCWNSVISSYANHGE---GKKALQMLEKM 647



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 260/534 (48%), Gaps = 19/534 (3%)

Query: 76  FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
           FA LL   +  D  +    VH  II +G      + N L++ Y +   +  AR+VF++MP
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTFAAALSAGVGLADIALGR 194
           +++ VS++ +++     G+ EE++ +F+E        P+++  ++ + A  GL     GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGR 164

Query: 195 ----QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT-C 249
               Q+ +F+VK+ F  +V+V   L+D Y K   +  AR +F  +PE   V++  MI+ C
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
                 Y  SL+LF +L         +  ST+LS  +    L+ G+QIH   +      +
Sbjct: 225 VKMGRSYV-SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             + N L+D Y KCGR   A ++F  + + + + WT ++S Y Q    +EA+ LF  M +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D    +SIL + A L +L  G Q+H++ I++   ++ +  ++L+DMYAK   L D
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403

Query: 430 AIQTFKEMPERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           A + F      ++V +NA+I   ++ G   +    L  F DM     +P  ++ +S+L A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463

Query: 487 CSHCGLIEEGL-QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
            +   L   GL +  + +  KY L       ++++D+     C  ++  +  +M  + D 
Sbjct: 464 SA--SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DL 520

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
           ++W+S+          E   +A +   +++  R+       +N+   AG   SV
Sbjct: 521 VIWNSMFAGYVQQSENE---EALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 158/320 (49%), Gaps = 8/320 (2%)

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           R +  F+ LL + A+   L     +H Q IV     +  ++N L+++Y++ G    A+++
Sbjct: 42  RGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI-SADQATFASILRASAELAS 391
           F  +   + V W+ M+SA    G  EE+L +F+E  R    S ++   +S ++A + L  
Sbjct: 102 FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG 161

Query: 392 LS--LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
               +  QL SF+++SGF  +V+ G+ L+D Y K G++  A   F  +PE++ V+W  +I
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           S C + G +  +L+ F  +++    PD   L +VLSACS    +E G Q  ++   +Y L
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGL 280

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
                    ++D   + G    A KL   MP   + I W+++++    +K     K+A +
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG---YKQNALHKEAME 336

Query: 570 QLFKMEKLRDAAPYVAMSNI 589
               M K        A S+I
Sbjct: 337 LFTSMSKFGLKPDMYACSSI 356


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/578 (36%), Positives = 344/578 (59%), Gaps = 22/578 (3%)

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANA---------LLDLYSKHDCVVEARKLFGEMP 236
           G++ I   RQ+HAF ++      V +++A         L+ L S    +  A K+F ++ 
Sbjct: 26  GVSSITKLRQIHAFSIR----HGVSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFSKIE 80

Query: 237 E-VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLDLQ 292
           + ++   +N +I  YA       +  L+RE++ +     D   +PF  L+  V    D++
Sbjct: 81  KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPF--LIKAVTTMADVR 138

Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
           +G  IH+  I +   S + V NSL+ +YA CG    A ++F  +     V W ++I+ + 
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
           + G  EEAL L+ EM    I  D  T  S+L A A++ +L+LGK++H ++I+ G   N+ 
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258

Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS- 471
           S + LLD+YA+ G +++A   F EM ++N VSW +LI   A NG  +  ++ F+ M  + 
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
           G  P  ++ + +L ACSHCG+++EG +YF  M ++YK+ P+ EH+  MVD+L R+G   +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
           A + +  MP +P+ ++W +++ +C +H + + A+ A  Q+ ++E    +  YV +SN+YA
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEP-NHSGDYVLLSNMYA 437

Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
              +W  V +++K M   GV+KV  +S VE+ ++VH F   D+ HPQ++ I  K++ +  
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497

Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
            ++ EGY P  S    D +EE K  ++ YHSE++AIAF LI+TPE SPI V+KNLR C D
Sbjct: 498 RLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 557

Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           CH AIKL+SK+  REI VRD SRFHHFK+G CSC+D+W
Sbjct: 558 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 177/351 (50%), Gaps = 11/351 (3%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  LI GY++      AF L+ +MR  G  +PD  T+  L+   +          +H+ +
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           I+ G+ S++ + NSL+  Y     +  A +VF +MP+KD V++N++I GFA+ G  EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            L+ EM   G KP  FT  + LSA   +  + LG++VH +++K     N+  +N LLDLY
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPF 278
           ++   V EA+ LF EM + + VS+  +I   A N   KE+++LF+ ++ T      +  F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 279 STLLSVVAN----KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
             +L   ++    K   +  R++  +  +   I        +VD+ A+ G+ ++A E   
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF---GCMVDLLARAGQVKKAYEYIK 384

Query: 335 NLS-HISTVPWTAMISAYVQKG--NLEEALNLFIEMCRANISADQATFASI 382
           ++    + V W  ++ A    G  +L E   + I     N S D    +++
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +N  S+N+L+  Y + G +  A+ LF+ MVD+ +VSWT LI G +     +EA +LF  
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M +  G  P  +TF  +L  CS      E
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKE 342


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/475 (41%), Positives = 299/475 (62%), Gaps = 6/475 (1%)

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
           F +ST+L+        ++    H Q I    +    V  +L+D Y K G  +EA ++F  
Sbjct: 11  FTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQR 66

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA-SAELASLSL 394
           +     V W+AMI  Y Q G+ E A+ +F++M +  I  ++ TF+ I+ A +A  A +  
Sbjct: 67  IEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQ 126

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           GKQLH++ I+S F + +   SALL MY+K G ++ A + FK   ER++VSWN++IS  AQ
Sbjct: 127 GKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQ 186

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           +G  +  L+ FE+M +   + D V+ + V+SAC+H GL  EG +YF+ M + + + P+ E
Sbjct: 187 HGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRME 246

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY+ MVD+  R+G   +A +++ +MPF     +W +++ +  IH+NLE  K AAD+L  +
Sbjct: 247 HYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISL 306

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           +  ++ A YV ++N+YA  G W+  ++V+K M E+ V+KV  YSW+E+K+K + F A D 
Sbjct: 307 QP-QNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDV 365

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP +N+I  K+E L  ++K  GY+PDTS    D DEE K   L  HSERLAIAF LI T
Sbjct: 366 SHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGT 425

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           P G+P+ ++KNLR C DCH+ IKLIS + GR+I VRDS+RFHHFK G CSC D+W
Sbjct: 426 PPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 11/292 (3%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           M   G KP+DFT++  L+A  G++      ++HA  +K N+V++  V  ALLD Y K   
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPF----EMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 225 VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
           V EA K+F  + E D V+++ MI  YA     + ++++F ++   +   +++ FS +++ 
Sbjct: 57  VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116

Query: 285 -VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             A    ++ G+Q+H  +I +   + + V+++L+ MY+K G  E A E+F        V 
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVS 176

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           W ++IS Y Q G   +AL +F EM R N+  D  TF  ++ A       + G++    ++
Sbjct: 177 WNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMV 236

Query: 404 RSGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMP---ERNIVSWNALISA 451
           +   +       S ++D+Y ++G L  A++   EMP     N+  W  L++A
Sbjct: 237 KDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANV--WRTLLAA 286



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 159/294 (54%), Gaps = 7/294 (2%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G  P+  T++T+L+  ++P  +    ++HA  IK  Y     +  +L+D+Y K   +D A
Sbjct: 5   GIKPNDFTYSTILT--AQPGVSP--FEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEA 60

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVG 186
            +VF+ + +KD V+++A+I G+A+ G  E A+++FV+M     KP+++TF+  ++A    
Sbjct: 61  SKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAP 120

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            A +  G+Q+HA+ +K+ F   + V++ALL +YSK   +  A ++F    E D VS+N +
Sbjct: 121 TAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSI 180

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           I+ YA +   +++L++F E+Q    +     F  ++S   +      G++     +    
Sbjct: 181 ISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHH 240

Query: 307 I-SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
           I   ++  + +VD+Y + G   +A EI   +   ++   W  +++A     NLE
Sbjct: 241 IEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLE 294



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 128/229 (55%), Gaps = 7/229 (3%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+  YVK GN+  A ++F  + ++  V+W+ +I GY+Q      A ++FV M  +    P
Sbjct: 47  LLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKE-KIKP 105

Query: 72  DYVTFATLLSGCSEPDTANEL-IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           +  TF+ +++ C+ P    E   Q+HA  IK  +N+ L + ++L+  Y K   ++ A  V
Sbjct: 106 NEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEV 165

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLA 188
           FK   ++D VS+N++I+G+A+ G   +A+++F EMQ    +    TF   +SA    GLA
Sbjct: 166 FKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLA 225

Query: 189 DIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
           +   G++    +VK + +E  +   + ++DLY +   +V+A ++  EMP
Sbjct: 226 N--EGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMP 272



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N     ++ L++ Y K G++ +A E+F    +R  VSW  +I GY+Q    R+A ++F +
Sbjct: 140 NNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEE 199

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN--SILIICNSLVDSYCK 120
           M+     + D VTF  ++S C+    ANE  Q + DI+   ++    +   + +VD Y +
Sbjct: 200 MQRQ-NLEMDGVTFIGVISACTHTGLANEG-QRYFDIMVKDHHIEPRMEHYSCMVDLYGR 257

Query: 121 IRCLDLARRVFKEMP 135
              L  A  +  EMP
Sbjct: 258 AGMLVKAMEIINEMP 272


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/559 (36%), Positives = 330/559 (59%), Gaps = 3/559 (0%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE--VDGVSYNVMITCY 250
           G++VH+ +VK  +  +  +AN L+++Y K   + EAR +F ++ E   D +S+N +I  Y
Sbjct: 43  GKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAY 102

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
             N   KE+L LF+ +       +Q      +   A+    + GR +H   +     S+ 
Sbjct: 103 TQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDT 162

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
            V  SLV+M+ KC   + A+ +F +L   + V W  M++ Y Q    ++A+ +F  M   
Sbjct: 163 MVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLE 222

Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
            +  D  TF +I+ A A LA+ + G+ +H  +  SG   +V  G+A++  Y K G L +A
Sbjct: 223 GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNA 282

Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
              F  + ++N V+W+A+++A AQNG     ++ + +MVQ G + + ++ L +L ACSH 
Sbjct: 283 RAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHA 342

Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
           G   +G+ YF SM + + + P  EHY +++D+L RSG    +E L+  MP+EPD   W +
Sbjct: 343 GRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLA 402

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
           ++ +CR+H +++   + A+ +++++   D+ PY+ +SN+Y+  G+ +   + +KAMR RG
Sbjct: 403 LLGACRMHGDVDRGARIAELIYELDP-EDSGPYILLSNLYSSTGRMDEARRTRKAMRLRG 461

Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
           + K    S +E+K +VH F A  +LHPQ   I  +IE L   +K+ GY  D    L D +
Sbjct: 462 ITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVE 521

Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
           EE K + L YHSERLAIAF LI+TP G+ + ++KNLR C DCHAA+K ISK+ GR+I VR
Sbjct: 522 EEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVR 581

Query: 731 DSSRFHHFKDGFCSCRDFW 749
           D+ RFHHF++G CSC D+W
Sbjct: 582 DAIRFHHFENGACSCGDYW 600



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 4/387 (1%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           T+  LL  C++     E  +VH+ ++K GY S  +I N L++ Y K   +  AR VF ++
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 135 PQK--DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
            +K  D +S+N +I  + + GL +EA+ LF  M   G   +  T   A+ A   L     
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           GR VHA  V      +  V  +L++++ K   V  AR +F  +P  + V++N M+  Y+ 
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
           N Q K+++++FR +           F T++   A       GR +H     +    +V +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
             +++  Y KCGR + A+ IF +L   +TV W+A+++AY Q G   EA+ L+ EM +  +
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDAI 431
             +  TF  +L A +       G      +IR   +  VF     L+D+  +SG L+ + 
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385

Query: 432 QTFKEMP-ERNIVSWNALISACAQNGD 457
                MP E +  +W AL+ AC  +GD
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGD 412



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 173/360 (48%), Gaps = 15/360 (4%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTA--VSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
           N+LI  Y K G +A AR +F+ + ++ A  +SW  +IG Y+Q    +EA  LF  M  +G
Sbjct: 63  NLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEG 122

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
               + VT    +  C+   +  E   VHA  +     S  ++  SLV+ + K + +D A
Sbjct: 123 -VIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAA 181

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           R VF  +P+K+ V++N ++  +++    ++AI++F  M   G +P   TF   + A   L
Sbjct: 182 RAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAAL 241

Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
           A    GR VH  +  +    +V +  A++  Y K   +  AR +F  + + + V+++ ++
Sbjct: 242 AAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAIL 301

Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
             YA N    E+++L+ E+     + +   F  LL   ++      GR +       + I
Sbjct: 302 AAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHA-----GRSMDGVDYFVSMI 356

Query: 308 SEVKVAN------SLVDMYAKCGRFEEAKEIFANLSH-ISTVPWTAMISAYVQKGNLEEA 360
            +  V        +L+D+  + G+ + ++++  ++ +   +  W A++ A    G+++  
Sbjct: 357 RDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRG 416



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 1/179 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T+    L++ + K  N+  AR +F+S+  +  V+W  ++  YSQ  Q ++A ++F  M 
Sbjct: 161 DTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMD 220

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            + G  PD VTF T++  C+      E   VH DI   G    + +  +++  Y K   L
Sbjct: 221 LE-GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRL 279

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           D AR +F  + +K++V+++A++  +A+ G   EAI+L+ EM   G + +  TF   L A
Sbjct: 280 DNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFA 338



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
           +T+  +L+  A+  +L  GK++HS +++ G+ S+    + L++MY K G + +A   F +
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 437 MPERN--IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIE 494
           + E+N  ++SWN +I A  QNG  +  L  F+ M   G   + V+L++ + AC+     E
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
           EG +  +++    +L        S+V++  +    D A  +   +P   + + W++++  
Sbjct: 145 EG-RIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP-RKNLVTWNNMVAV 202

Query: 555 CRIHKNLEFAKKAADQLFKMEKLRDAAP 582
                +  +  K A Q+F+   L    P
Sbjct: 203 ----YSQNWQCKKAIQVFRFMDLEGVQP 226


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/670 (32%), Positives = 373/670 (55%), Gaps = 6/670 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           + V+ + L+  Y K   L  A  +F  M +R  V W+ +I GY Q ++F E  KLF DM 
Sbjct: 172 DVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM- 230

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKIR 122
              G      T+A++   C+         Q+H   +K  F Y+SI  I  + +D Y K  
Sbjct: 231 LKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSI--IGTATLDMYAKCD 288

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A +VF  +P     S+NA+I G+A++    +A+++F  +Q       + + + AL+
Sbjct: 289 RMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALT 348

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   +     G Q+H   VK     N+ VAN +LD+Y K   +VEA  +F +M   D VS
Sbjct: 349 ACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVS 408

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N +I  +  NE+  ++L LF  +  +  +   F + +++   A +  L  G +IH + +
Sbjct: 409 WNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIV 468

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +    +  V ++LVDMY KCG   EA++I   L   +TV W ++IS +  +   E A  
Sbjct: 469 KSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQR 528

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
            F +M    +  D  T+A++L   A +A++ LGKQ+H+ +++    S+V+  S L+DMY+
Sbjct: 529 YFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYS 588

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G+++D+   F++ P+R+ V+W+A+I A A +G  +  +K FE+M     +P+    +S
Sbjct: 589 KCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFIS 648

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL AC+H G +++GL YF  M   Y L P  EHY+ MVD+L RS   +EA KL+  M FE
Sbjct: 649 VLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFE 708

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
            D+++W +++++C++  N+E A+KA + L +++  +D++ YV ++N+YA  G W  V+++
Sbjct: 709 ADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDP-QDSSAYVLLANVYANVGMWGEVAKI 767

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           +  M+   ++K    SW+E++ +VH F   D+ HP++ EI  +   L+ EMK  GY PD 
Sbjct: 768 RSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDI 827

Query: 663 SCALHDEDEE 672
              L +E EE
Sbjct: 828 DSMLDEEVEE 837



 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/587 (31%), Positives = 319/587 (54%), Gaps = 17/587 (2%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++ +S N +I GY + GN+  A+ LF++M +R  VSW  L+  Y      R++ ++F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V MR+      DY TF+ +L  CS  +     +QVH   I+ G+ + ++  ++LVD Y K
Sbjct: 127 VRMRSLK-IPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            + LD A R+F+EMP+++ V ++A+I G+ +     E +KLF +M  +G   S  T+A+ 
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +  GL+   LG Q+H   +K++F  +  +  A LD+Y+K D + +A K+F  +P    
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFS---TLLSVVANKLDLQIGRQI 297
            SYN +I  YA  +Q  ++L++F+ LQ T     +   S   T  SV+   L+   G Q+
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE---GIQL 362

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H   +       + VAN+++DMY KCG   EA  IF ++     V W A+I+A+ Q   +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
            + L+LF+ M R+ +  D  T+ S+++A A   +L+ G ++H  +++SG   + F GSAL
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           +DMY K G L +A +    + E+  VSWN++IS  +    ++   + F  M++ G  PD+
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDN 542

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY--ASMVDILCRSGCFDEAEKL 535
            +  +VL  C++   IE G Q      Q  KL    + Y  +++VD+  + G   ++  +
Sbjct: 543 FTYATVLDVCANMATIELGKQIH---AQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599

Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             + P + D + WS++I +   H + E A K    LF+  +L +  P
Sbjct: 600 FEKTP-KRDYVTWSAMICAYAYHGHGEQAIK----LFEEMQLLNVKP 641



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 271/549 (49%), Gaps = 35/549 (6%)

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF+ +L  CS     N   Q HA +I   +   + + N LV  YCK   ++ A +VF  M
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 135 PQKDSVSFNALITGFAK-------------------------------EGLNEEAIKLFV 163
           P +D +S+N +I G+A+                                G+N ++I++FV
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 164 EMQHLGFKPSDF-TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            M+ L   P D+ TF+  L A  G+ D  LG QVH   ++  F  +V   +AL+D+YSK 
Sbjct: 128 RMRSLKI-PHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             +  A ++F EMPE + V ++ +I  Y  N+++ E LKLF+++       SQ  ++++ 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
              A     ++G Q+H   + +    +  +  + +DMYAKC R  +A ++F  L +    
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV 402
            + A+I  Y ++    +AL +F  + R  +S D+ + +  L A + +     G QLH   
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366

Query: 403 IRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
           ++ G   N+   + +LDMY K G+L +A   F +M  R+ VSWNA+I+A  QN +   TL
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
             F  M++S  +PD  +  SV+ AC+    +  G++    +  K  +       +++VD+
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIV-KSGMGLDWFVGSALVDM 485

Query: 523 LCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
             + G   EAEK+  ++  E   + W+S+I+     K  E A++   Q+ +M  + D   
Sbjct: 486 YGKCGMLMEAEKIHDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFT 544

Query: 583 YVAMSNIYA 591
           Y  + ++ A
Sbjct: 545 YATVLDVCA 553



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 225/510 (44%), Gaps = 71/510 (13%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK------------- 221
           FTF+  L     L  +  G+Q HA ++ T+FV  ++VAN L+  Y K             
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 222 --HDCVVE----------------ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
             H  V+                 A+ LF  MPE D VS+N +++CY  N   ++S+++F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
             ++  +       FS +L   +   D  +G Q+H   I     ++V   ++LVDMY+KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
            + + A  IF  +   + V W+A+I+ YVQ     E L LF +M +  +   Q+T+AS+ 
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R+ A L++  LG QLH   ++S F  +   G+A LDMYAK   + DA + F  +P     
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           S+NA+I   A+       L+ F+ + ++    D +SL   L+ACS      EG+Q  + +
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGL 365

Query: 504 TQKYKLRPKKEHYASMVDILCRSGC-------FDEAEKL--------------------- 535
             K  L        +++D+  + G        FD+ E+                      
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 536 ------MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
                 M +   EPD+  + SV+ +C   + L +  +   ++ K     D     A+ ++
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSW 619
           Y   G      ++   + E+     T  SW
Sbjct: 486 YGKCGMLMEAEKIHDRLEEK-----TTVSW 510



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 44/325 (13%)

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
           +F FS +L   +N   L  G+Q H Q IVT+ +  + VAN LV  Y K      A ++F 
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 335 NLSHISTVPWTAMISAYVQKGNL-------------------------------EEALNL 363
            + H   + W  MI  Y + GN+                                +++ +
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F+ M    I  D ATF+ +L+A + +    LG Q+H   I+ GF ++V +GSAL+DMY+K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
              L  A + F+EMPERN+V W+A+I+   QN      LK F+DM++ G      +  SV
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH-YASMV-----DILCRSGCFDEAEKLMA 537
             +C+       GL  F   TQ +    K +  Y S++     D+  +     +A K+  
Sbjct: 246 FRSCA-------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLE 562
            +P  P +   + ++   R  + L+
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLK 323


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/627 (36%), Positives = 343/627 (54%), Gaps = 51/627 (8%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAK-EGLNE--EAIKLFVEMQHLGFKPSDFTFAAALSA 183
           A   F     K + ++N L+ G+AK  GL    +A +LF  + H    P   ++   LS 
Sbjct: 31  AEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPH----PDTVSYNTLLSC 86

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                DI   R+V +    T  V++V   N ++   SK+    EA  +F  MP  + VS+
Sbjct: 87  HFACGDIDGARRVFS----TMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSW 142

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N M+   A +     +  LFR                                  T  I+
Sbjct: 143 NAMVAALACSGDMGAAEDLFRNAPEK-----------------------------TDAIL 173

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            TA         +V  Y   G  ++A E F  +   + V W A+++ YV+    ++AL +
Sbjct: 174 WTA---------MVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRV 224

Query: 364 FIEMCRANI-SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M   +I   + +T +S+L   + L++L  G+Q+H + ++     NV  G++LL MY 
Sbjct: 225 FKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYC 284

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G L DA + F EM  ++IV+WNA+IS  AQ+G     +K FE M   G  PD ++LL+
Sbjct: 285 KCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLA 344

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+AC H GL + G+Q F +M + YK+ P+ +HY+ MVD+LCR+G  + A  ++  MPFE
Sbjct: 345 VLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFE 404

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P    + +++ +CR++KNLEFA+ AA +L + +  ++A  YV ++NIYAVA +W  VS+V
Sbjct: 405 PHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDP-QNAGAYVQLANIYAVANKWADVSRV 463

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           ++ M++  V K   YSW+E+K   H F +ND LHPQ   I  K++ L   MK  GY PD 
Sbjct: 464 RRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDL 523

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
             ALHD ++ +K + L  HSE+LAIAF LI+T  G  + + KNLR C DCH A KLISKI
Sbjct: 524 DFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKI 583

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             REI +RD++RFHHF+ G CSC D+W
Sbjct: 584 EDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 199/449 (44%), Gaps = 59/449 (13%)

Query: 13  ISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKN---QFREAFKLFVDMRTDGGS 69
           ++  V+ G+LA A E F S   +T  ++  L+ GY++ +   +  +A +LF     D   
Sbjct: 19  VAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLF-----DSIP 73

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--A 127
            PD V++ TLLS                                     C   C D+  A
Sbjct: 74  HPDTVSYNTLLS-------------------------------------CHFACGDIDGA 96

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA-ALSAGVG 186
           RRVF  MP KD  S+N +++G +K G +EEA  +F  M        +   AA A S  +G
Sbjct: 97  RRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMG 156

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            A+  L R       KT+ +    +  A++  Y     V +A + FG MP  + VS+N +
Sbjct: 157 AAE-DLFRNAPE---KTDAI----LWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAV 208

Query: 247 ITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +  Y  N +  ++L++F+ + + +    +    S++L   +N   L  GRQ+H   +   
Sbjct: 209 VAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLP 268

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
               V V  SL+ MY KCG   +A ++F  +S    V W AMIS Y Q G   +A+ LF 
Sbjct: 269 LSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFE 328

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKS 424
           +M    +  D  T  ++L A         G Q    +  +      +   S ++D+  ++
Sbjct: 329 KMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRA 388

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISAC 452
           G L+ A+     MP E +  ++  L++AC
Sbjct: 389 GLLERAVNMIHSMPFEPHPSAYGTLLTAC 417



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 16/264 (6%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++SGY+ +GN+  A E F +M  R  VSW  ++ GY + ++  +A ++F  M  D    P
Sbjct: 177 MVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQP 236

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T +++L GCS         QVH   +K   +  + +  SL+  YCK   L+ A +VF
Sbjct: 237 NASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVF 296

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV--GLAD 189
            EM  KD V++NA+I+G+A+ G   +AIKLF +M+  G  P   T  A L+A +  GL D
Sbjct: 297 DEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCD 356

Query: 190 IALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMI 247
              G Q    + +   +E  +   + ++DL  +   +  A  +   MP E    +Y  ++
Sbjct: 357 --FGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLL 414

Query: 248 TCYAWNEQYKESLKLFRELQFTRF 271
           T          + ++++ L+F  F
Sbjct: 415 T----------ACRVYKNLEFAEF 428



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 170/370 (45%), Gaps = 43/370 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           +P+ +TVS N L+S +   G++  AR +F++M  +   SW  ++ G S+     EA  +F
Sbjct: 72  IPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMF 131

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M        + +  A   SG  +   A +L +   +       +  I+  ++V  Y  
Sbjct: 132 RIMPVRNAVSWNAMVAALACSG--DMGAAEDLFRNAPE------KTDAILWTAMVSGYMD 183

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAA 179
              +  A   F  MP ++ VS+NA++ G+ K    ++A+++F  M +    +P+  T ++
Sbjct: 184 TGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSS 243

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
            L     L+ +  GRQVH + +K     NV V  +LL +Y K   + +A K+F EM   D
Sbjct: 244 VLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKD 303

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIH 298
            V++N MI+ YA +    +++KLF +++    D    P + TLL+V+           IH
Sbjct: 304 IVAWNAMISGYAQHGGGMQAIKLFEKMK----DEGVVPDWITLLAVLT--------ACIH 351

Query: 299 TQTIVTTAISEVKVANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           T                L D   +C    +EA +I   + H     ++ M+    + G L
Sbjct: 352 T---------------GLCDFGIQCFETMQEAYKIEPQIDH-----YSCMVDLLCRAGLL 391

Query: 358 EEALNLFIEM 367
           E A+N+   M
Sbjct: 392 ERAVNMIHSM 401



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 35/178 (19%)

Query: 6   TVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRT 65
           TV T++L S Y K G+L  A ++F+ M  +  V+W  +I GY+Q     +A KLF  M+ 
Sbjct: 274 TVGTSLL-SMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMK- 331

Query: 66  DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
           D G  PD++T   +L+ C           +H  +  FG                 I+C +
Sbjct: 332 DEGVVPDWITLLAVLTAC-----------IHTGLCDFG-----------------IQCFE 363

Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
             +  +K  PQ D   ++ ++    + GL E A+ +   M    F+P    +   L+A
Sbjct: 364 TMQEAYKIEPQID--HYSCMVDLLCRAGLLERAVNMIHSMP---FEPHPSAYGTLLTA 416



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 49/223 (21%)

Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
           T  ++A V++G+L  A   F        +      A   +AS  L  L+  ++L   +  
Sbjct: 16  TVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASG-LIRLADARRLFDSIPH 74

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
                +  S + LL  +   G +  A + F  MP +++ SWN ++S  ++NG ++     
Sbjct: 75  P----DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAM 130

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F              ++ V +A S                           + +MV  L 
Sbjct: 131 FR-------------IMPVRNAVS---------------------------WNAMVAALA 150

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVI----NSCRIHKNLEF 563
            SG    AE L    P + D I+W++++    ++  + K +EF
Sbjct: 151 CSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEF 193


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 242/744 (32%), Positives = 381/744 (51%), Gaps = 88/744 (11%)

Query: 86  PDTANELIQVHADIIKFGY-----NSILIICNSLVDSYCKIRCLD-------LARRVFKE 133
           P T  +  ++HA +   G+      S   + NSLV+      CL+        A  +F  
Sbjct: 9   PRTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVN------CLEPHPLHLRYALHLFDR 62

Query: 134 MPQKDSVSFNALITGFAKEGLN-EEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---D 189
           MP   +  F+  +   ++ G +      LF  M+  G +P  FTF          +    
Sbjct: 63  MP-PSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHS 121

Query: 190 IALGRQVHAFVVKTNFVENV-FVANALLDLYSKHDCVVEARKLFGEM------------- 235
           + L   +HA  ++T       FV+N+L+ +Y +     +AR+ F E+             
Sbjct: 122 LLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLIS 181

Query: 236 ------------------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
                             P  D +S+  +I  Y+   + +E++  F+ +        +  
Sbjct: 182 GLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVT 241

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
              +LS  A   DL++GR +H         +   +  +L+DMYAKCG F  A+++F  L 
Sbjct: 242 VIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALG 301

Query: 338 -------------------HIST-------------VPWTAMISAYVQKGNLEEALNLFI 365
                              H+               + + +M++ Y+  G L EAL LF+
Sbjct: 302 RGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFM 361

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG 425
            M R ++  D  T  ++L A A L +L  G+ LH+ + +    ++++ G+ALLDMY K G
Sbjct: 362 SMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCG 421

Query: 426 SLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
            + +A   F+ M +R++ +W A+I+  A NG  +A L+ F  M   G+QP+SVS ++VL+
Sbjct: 422 RVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLT 481

Query: 486 ACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDE 545
           ACSH  L+ EG  YF+ M   Y + P+ EHY  M+D+L RSG  DEA  L+  MP +P+ 
Sbjct: 482 ACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNA 541

Query: 546 IMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKA 605
           ++W+S++++CR+HK+++ A+ AA+ L K+E   D   YV + NIY  + QWE+ S+++  
Sbjct: 542 VIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGV-YVQLYNIYIDSRQWENASKIRML 600

Query: 606 MRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
           M ER V+K   YS + +  +VH F  +D+ HP+  EI   +E +   +K  GY P TS  
Sbjct: 601 MEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQI 660

Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
             D DEE K ++L  HSE+LAIAF LIN     P+ + KNLR C DCH+AIKLIS++  R
Sbjct: 661 TVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNR 720

Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
           EI VRD SRFHHF++G CSC DFW
Sbjct: 721 EIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 206/501 (41%), Gaps = 70/501 (13%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
           +L  A  LF+ M   T +  T L       +     F LF  MR   G  PD  TF  L 
Sbjct: 52  HLRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRR-AGVRPDGFTFHFLF 110

Query: 81  SGCSEPDTANELI---QVHADIIKFGYNSIL-IICNSLVDSYCKIRCLDLARRVFKEMPQ 136
              S     + L+    +HA  ++    S    + NSL+  Y ++     ARR F E+  
Sbjct: 111 KCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHV 170

Query: 137 KDSVSFNALITGFAKEGL-------------------------------NEEAIKLFVEM 165
           KD+V++  LI+G AK G+                                 EA+  F  M
Sbjct: 171 KDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTM 230

Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV--ENVFVA----------- 212
              G  P + T  A LSA   L D+ LGR +H  V +      EN+ VA           
Sbjct: 231 LSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDF 290

Query: 213 -------------------NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
                              NA++D Y KH  V  AR LF EM   D +++N M+T Y  +
Sbjct: 291 GHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHS 350

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
            Q +E+L LF  ++        F    LL+  A+   LQ GR +H         +++ + 
Sbjct: 351 GQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLG 410

Query: 314 NSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANIS 373
            +L+DMY KCGR +EA  +F  +       WTAMI+     G  + AL  F +M      
Sbjct: 411 TALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470

Query: 374 ADQATFASILRASAELASLSLGK-QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
            +  ++ ++L A +    L+ G+       I       +     ++D+  +SG L +A+ 
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 530

Query: 433 TFKEMP-ERNIVSWNALISAC 452
             K MP + N V W +++SAC
Sbjct: 531 LVKTMPIQPNAVIWASILSAC 551



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 216/473 (45%), Gaps = 58/473 (12%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ V+  MLISG  K G L   + L +    R  +SWT LI  YS+ N+ REA   F  M
Sbjct: 171 KDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTM 230

Query: 64  RTDGGSDPDYVTFATLLSGCSE-------------------PDTAN---ELIQVHADIIK 101
            + G + PD VT   +LS C++                   P + N    LI ++A    
Sbjct: 231 LSHGIA-PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGD 289

Query: 102 FGYNSILIIC----------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK 151
           FG+   +             N+++D YCK   +D+AR +F EM  +D ++FN+++TG+  
Sbjct: 290 FGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIH 349

Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
            G   EA+ LF+ M+    +  +FT    L+A   L  +  GR +HA + +     ++++
Sbjct: 350 SGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYL 409

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             ALLD+Y K   V EA  +F  M + D  ++  MI   A+N   K +L+ F +++   F
Sbjct: 410 GTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAK 330
             +   +  +L+  ++   L  GR    +  +   I  +++    ++D+  + G  +EA 
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 529

Query: 331 EIFANLS-HISTVPWTAMISAYVQKGNLEEAL--------------NLFIEMCRANISAD 375
           ++   +    + V W +++SA     +++ A                +++++    I + 
Sbjct: 530 DLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSR 589

Query: 376 QATFASILR---------ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           Q   AS +R          +A  +S+++  Q+H FV+       +    A+L+
Sbjct: 590 QWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLE 642


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/557 (36%), Positives = 323/557 (57%), Gaps = 6/557 (1%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R++HA V K+    + F+ + L+  Y+K     +A KLF +MP  D VS+N +I+   ++
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS--GFS 116

Query: 254 EQYKESLKLFRELQF-TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
                SL  F  ++F      ++    +++S  +  LD   G+ IH   I      EVKV
Sbjct: 117 RCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALD--AGKYIHGFGIKVGGTLEVKV 174

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
           ANSL++MY K G    A  +F  +   +TV W ++I+A V  G   E ++ F +M R  I
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234

Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
             D+ T  ++L+A   L    L + +H  +  +GF + +   +ALLD YAK G L  +  
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294

Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
            F E+   + V+W A+++  A +G  +  +K FE M   G +PD V+   +LSACSH GL
Sbjct: 295 VFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGL 354

Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + EG  YFN M++ Y + P+ +HY+ MVD+L R G  ++A +++  MP EP+  +W +++
Sbjct: 355 VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414

Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
            +CR+H N+E  K+ A+ L  ME L D   Y+ +SN+Y+ +  W+  ++V+  ++ERG++
Sbjct: 415 GACRVHGNIELGKEVAEHLINMEPL-DPRNYIMLSNMYSASRSWKDAAKVRALLKERGLK 473

Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
           +   YS +E  +K H F   D  HP+T +I  K+E L+ +++K GY   T   L D +EE
Sbjct: 474 RTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEE 533

Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
           +K + +  HSE+LAIAF L+ + EG  +++ KNLR C DCH+  KLIS I  R I +RD 
Sbjct: 534 VKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDP 593

Query: 733 SRFHHFKDGFCSCRDFW 749
            RFHHF DGFCSC D+W
Sbjct: 594 KRFHHFSDGFCSCADYW 610



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 198/405 (48%), Gaps = 12/405 (2%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRV 130
           P+ +  A L++  S P  +N   ++HA + K        I + LV  Y K+   + A ++
Sbjct: 38  PEAIVSALLIAVNSCPSISN-CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKL 96

Query: 131 FKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADI 190
           F +MP KD VS+N+LI+GF++  L+      +     +  KP++ T  + +SA  G  D 
Sbjct: 97  FDDMPHKDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDA 155

Query: 191 ALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCY 250
             G+ +H F +K      V VAN+L+++Y K   +  A +LF  +P+ + VS+N +I   
Sbjct: 156 --GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQ 213

Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR---QIHTQTIVTTAI 307
             N   +E +  F +++    ++ +    T+L+++   L L +G+    IH     T   
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDE---GTILALLQACLHLGVGKLAESIHGLMFCTGFG 270

Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
           +++ +A +L+D YAK GR   +  +F  +     V WTAM++ Y   G   EA+ LF  M
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESM 330

Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKSGS 426
               +  D  TF  +L A +    ++ GK   + +    G    V   S ++D+  + G 
Sbjct: 331 ANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGL 390

Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           L DA +  + MP E N   W AL+ AC  +G+ +   +  E ++ 
Sbjct: 391 LNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLIN 435



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 6/351 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           + L++ Y K G    A +LF+ M  +  VSW  LI G+S+      +   F  M+ +   
Sbjct: 78  DQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSV 135

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT  +++S CS    A + I  H   IK G    + + NSL++ Y K   L  A R
Sbjct: 136 KPNEVTILSMISACSGALDAGKYI--HGFGIKVGGTLEVKVANSLINMYGKSGDLTSACR 193

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ +P  ++VS+N++I      G   E I  F +M+ LG +  + T  A L A + L  
Sbjct: 194 LFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   +H  +  T F   + +A ALLD Y+K   +  +  +F E+   D V++  M+  
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
           YA +   +E++KLF  +     +     F+ LLS  ++   +  G+   +  + V     
Sbjct: 314 YAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEP 373

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            V   + +VD+  +CG   +A E+  N+    +   W A++ A    GN+E
Sbjct: 374 RVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 20/208 (9%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           +A  +++L A     S+S  +++H+ V +S    + F G  L+  Y K G  +DA++ F 
Sbjct: 39  EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIE 494
           +MP +++VSWN+LIS  ++      +L +F  M  +   +P+ V++LS++SACS  G ++
Sbjct: 99  DMPHKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALD 154

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI-- 552
            G +Y +    K     + +   S++++  +SG    A +L   +P +P+ + W+S+I  
Sbjct: 155 AG-KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212

Query: 553 ---NSCRIHKNLEFAKKAADQLFKMEKL 577
              N C        A++  D   KM +L
Sbjct: 213 QVTNGC--------AREGIDYFNKMRRL 232


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/657 (32%), Positives = 377/657 (57%), Gaps = 10/657 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +++     +LI  Y+K GN+  AR +F+++ +++ V+WT +I G  +  +   + +LF  
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  +G   PD    +T+LS CS         Q+HA I+++G+     + N L+DSY K  
Sbjct: 240 L-MEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCG 298

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +  A ++F  MP K+ +S+  L++G+ +  L++EA++LF  M   G KP  F  ++ L+
Sbjct: 299 RVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILT 358

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           +   L  +  G QVHA+ +K N   + +V N+L+D+Y+K DC+ EARK+F      D V 
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVL 418

Query: 243 YNVMITCYA-----WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
           +N MI  Y+     W  +  ++L +F +++F     S   F +LL   A+   L + +QI
Sbjct: 419 FNAMIEGYSRLGTQW--ELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
           H          ++   ++L+ +Y+ C   ++++ +F  +     V W +M S YVQ+   
Sbjct: 477 HGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSEN 536

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
           EEALNLF+E+  +    D+ TF  ++ A+  LASL LG++ H  +++ G   N +  +AL
Sbjct: 537 EEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNAL 596

Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
           LDMYAK GS +DA + F     R++V WN++IS+ A +G+ +  L+  E M+  G +P+ 
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNY 656

Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
           ++ + VLSACSH GL+E+GL+ F  M  ++ + P+ EHY  MV +L R+G  +EA +L+ 
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEARELIE 715

Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
           +MP +P  I+W S+++ C    N+E A+ AA+    +   +D+  +  +SNIYA  G W 
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAI-LSDPKDSGSFTLLSNIYASKGMWT 774

Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
              +V++ M+  GV K    SW+E+  +VH+F + D+ H + N+I   +++L+ +++
Sbjct: 775 DAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 295/575 (51%), Gaps = 10/575 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           +T  +N+L++ Y ++G +  AR++F  M +R  V+W+ ++   +    + E+  +F+D  
Sbjct: 78  DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANE--LIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
               + P+    ++ +  CS  D +    + Q+ + ++K  ++  + +   L+D Y K  
Sbjct: 138 RTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEG 197

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR VF  +P+K +V++  +I+G  K G +  +++LF ++      P  +  +  LS
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLS 257

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  G+Q+HA +++    ++  + N L+D Y K   V  A KLF  MP  + +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIIS 317

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +++ Y  N  +KE+++LF  +         F  S++L+  A+   L+ G Q+H  TI
Sbjct: 318 WTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTI 377

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN---LEE 359
                ++  V NSL+DMYAKC    EA+++F   +    V + AMI  Y + G    L +
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHD 437

Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
           ALN+F +M    I     TF S+LRASA L SL L KQ+H  + + G   ++F+GSAL+ 
Sbjct: 438 ALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIA 497

Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVS 479
           +Y+    LKD+   F EM  +++V WN++ S   Q  + +  L  F ++  S  +PD  +
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFT 557

Query: 480 LLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQM 539
            + +++A  +   ++ G Q F+    K  L        +++D+  + G  ++A K     
Sbjct: 558 FVDMVTAAGNLASLQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616

Query: 540 PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
               D + W+SVI+S   H      +KA   L KM
Sbjct: 617 A-SRDVVCWNSVISSYANHGE---GRKALQMLEKM 647



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 236/470 (50%), Gaps = 16/470 (3%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VH  II  G      + N L++ Y +   +  AR+VF++MP+++ V+++ +++     G 
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 155 NEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGR----QVHAFVVKTNFVENV 209
            EE++ +F++  +     P+++  ++ + A  GL     GR    Q+ +F+VK+ F  +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD--GSGRWMVFQLQSFLVKSRFDRDV 183

Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT-CYAWNEQYKESLKLFRELQF 268
           +V   L+D Y K   +  AR +F  +PE   V++  MI+ C      Y  SL+LF +L  
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV-SLQLFYQLME 242

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                  +  ST+LS  +    L+ G+QIH   +      +  + N L+D Y KCGR   
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A ++F  + + + + WT ++S Y Q    +EA+ LF  M +  +  D    +SIL + A 
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCAS 362

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           L +L  G Q+H++ I++   ++ +  ++L+DMYAK   L +A + F      ++V +NA+
Sbjct: 363 LHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAM 422

Query: 449 ISACAQNG---DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL-QYFNSMT 504
           I   ++ G   +    L  F DM     +P  ++ +S+L A +   L   GL +  + + 
Sbjct: 423 IEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA--SLTSLGLSKQIHGLM 480

Query: 505 QKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
            K+ L       ++++ +     C  ++  +  +M  + D ++W+S+ + 
Sbjct: 481 FKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFSG 529



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 161/324 (49%), Gaps = 16/324 (4%)

Query: 273 RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           R +  F+ LL + A    L     +H Q IV+    +  ++N L+++Y++ G    A+++
Sbjct: 42  RGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKV 101

Query: 333 FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI-SADQATFASILRASAEL-- 389
           F  +   + V W+ M+SA    G  EE+L +F++  R    S ++   +S ++A + L  
Sbjct: 102 FEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDG 161

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           +   +  QL SF+++S F  +V+ G+ L+D Y K G++  A   F  +PE++ V+W  +I
Sbjct: 162 SGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMI 221

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           S C + G +  +L+ F  +++    PD   L +VLSACS    +E G Q        + L
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQ-----IHAHIL 276

Query: 510 RPKKEHYASMVDILCRS----GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
           R   E  AS++++L  S    G    A KL   MP   + I W+++++    +K     K
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKNIISWTTLLSG---YKQNSLHK 332

Query: 566 KAADQLFKMEKLRDAAPYVAMSNI 589
           +A +    M K        A S+I
Sbjct: 333 EAMELFTSMPKFGLKPDMFACSSI 356


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/580 (36%), Positives = 345/580 (59%), Gaps = 26/580 (4%)

Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH-----------DCVVEARKLFGE 234
           G++ +   RQ+HAF ++      V +++A L    KH             +  A K+F +
Sbjct: 26  GVSSLTKLRQIHAFSIRNG----VSISDAEL---GKHLIFYLVSLPSPPPMSYAHKVFSK 78

Query: 235 MPE-VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF---DRSQFPFSTLLSVVANKLD 290
           + + ++   +N +I  YA       ++ L+RE++ + F   D   +PF  LL  V    D
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPF--LLKAVGKMAD 136

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           +++G  IH+  I +   S + V NSL+ +YA CG    A ++F  +     V W ++I+ 
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 196

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
           + + G  EEAL L+ EM    I  D  T  S+L A A++ +L+LGK+ H ++I+ G   N
Sbjct: 197 FAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN 256

Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-V 469
           + S + LLD+YA+ G +++A   F EM ++N VSW +LI   A NG  +  ++ F++M  
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMES 316

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           + G  P  ++ + +L ACSHCG+++EG +YF  M+++YK+ P+ EH+  MVD+L R+G  
Sbjct: 317 KEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQV 376

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
            +A + + +MP +P+ ++W +++ +C +H + + A+ A  ++ ++E    +  YV +SN+
Sbjct: 377 KKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEP-NHSGDYVLLSNM 435

Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
           YA   +W  V +++K M   GVRKV  +S VE+ ++VH F   D+ HPQ + I  K++ +
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEM 495

Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
              ++ EGY P  S    D +EE K  +L YHSE++AIAF LI+TPE  PI V+KNL+ C
Sbjct: 496 TDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVC 555

Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIKL+SK+  REI VRD SRFHHFK+G CSC+D+W
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 182/351 (51%), Gaps = 27/351 (7%)

Query: 124 LDLARRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLGF-KPSDFTFAAAL 181
           +  A +VF ++ +  +V  +N LI G+A+ G +  A+ L+ EM+  GF +P   T+   L
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
            A   +AD+ LG  +H+ V+++ F   ++V N+LL LY+    V  A K+F +MPE D V
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           ++N +I  +A N + +E+L L+ E+         F   +LLS  A    L +G++ H   
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYM 248

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           I       +  +N L+D+YA+CGR EEAK +F  +   ++V WT++I      G  +EA+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAI 308

Query: 362 NLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF-----MSNVFS-- 413
            LF  M  +  +   + TF  IL A +           H  +++ GF     MS  +   
Sbjct: 309 ELFKNMESKEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMSEEYKIE 357

Query: 414 -----GSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDA 458
                   ++D+ A++G +K A +   +MP + N+V W  L+ AC  +GD+
Sbjct: 358 PRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDS 408



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 173/351 (49%), Gaps = 11/351 (3%)

Query: 40  WTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADI 99
           W  LI GY++      A  L+ +MR  G  +PD  T+  LL    +         +H+ +
Sbjct: 88  WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147

Query: 100 IKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAI 159
           I+ G+ S++ + NSL+  Y     +  A +VF +MP+KD V++N++I GFA+ G  EEA+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 160 KLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY 219
            L+ EM   G KP  FT  + LSA   +  + LG++ H +++K     N+  +N LLDLY
Sbjct: 208 ALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 220 SKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPF 278
           ++   V EA+ LF EM + + VS+  +I   A N   KE+++LF+ ++        +  F
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITF 327

Query: 279 STLLSVVAN----KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
             +L   ++    K   +  R++  +  +   I        +VD+ A+ G+ ++A E   
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHF---GCMVDLLARAGQVKKAYEYIL 384

Query: 335 NLS-HISTVPWTAMISAYVQKG--NLEEALNLFIEMCRANISADQATFASI 382
            +    + V W  ++ A    G  +L E   + I     N S D    +++
Sbjct: 385 KMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNM 435



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
            +N  S+N+L+  Y + G +  A+ LF+ MVD+ +VSWT LI G +     +EA +LF +
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKN 313

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANE 91
           M +  G  P  +TF  +L  CS      E
Sbjct: 314 MESKEGLLPCEITFVGILYACSHCGMVKE 342


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/667 (33%), Positives = 366/667 (54%), Gaps = 49/667 (7%)

Query: 90  NELIQVHADIIKFGYNSILIICNSLVDSYCKIRC-----LDLARRVFKEMPQKDSVSFNA 144
           + L Q HA I++ G+     I  SLV SY  +        + + RVF  + + +   +N 
Sbjct: 49  HHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNC 108

Query: 145 LITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
           +I    +     +AI L+ EM     +P+ +T+ A L A      +A G QVHA +VK  
Sbjct: 109 MIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHG 168

Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLF 263
              +  + ++ + +Y+    +VEAR++  +   EVD V +N MI  Y    + + + +LF
Sbjct: 169 LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELF 228

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
             +     DRS                                   +   N+++  +++C
Sbjct: 229 EGMP----DRSM----------------------------------ISTWNAMISGFSRC 250

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
           G  E A+E F  +     + W+AMI  Y+Q+G   EAL +F +M +  I   +    S+L
Sbjct: 251 GMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVL 310

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
            A A L +L  G+ +H++  R+    +   G++L+DMYAK G +  A + F++M  + + 
Sbjct: 311 SACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
           SWNA+I   A +G A+  +  F  M      P+ ++ + VL+AC+H GL+++GL  FNSM
Sbjct: 371 SWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSM 427

Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
            ++Y + P+ EHY  +VD+L R+G   EAEK+++ +P EP   +W +++ +CR H N+E 
Sbjct: 428 RKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVEL 487

Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL- 622
            ++    L ++E  +++  Y  +SNIYA AG+WE V +V+K M+ERG++     S ++L 
Sbjct: 488 GERVGKILLELEP-QNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLG 546

Query: 623 KSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHS 682
           + +VH F   D  HPQ  +I + ++ + + ++ EGY+PD S  L D DEE K  ++  HS
Sbjct: 547 RGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHS 606

Query: 683 ERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGF 742
           E+LAI F LINT  G+ I ++KNLR C DCH+A KLIS++  REI VRD  R+HHF++G 
Sbjct: 607 EKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGA 666

Query: 743 CSCRDFW 749
           CSC+DFW
Sbjct: 667 CSCKDFW 673



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 159/357 (44%), Gaps = 53/357 (14%)

Query: 1   MPNQNTVST-NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKL 59
           MP+++ +ST N +ISG+ + G +  ARE F+ M +R  +SW+ +I GY Q+  F EA ++
Sbjct: 231 MPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEI 290

Query: 60  FVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC 119
           F  M+ +    P      ++LS C+     ++   +H    +       ++  SLVD Y 
Sbjct: 291 FHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYA 349

Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
           K   +DLA  VF++M  K+  S+NA+I G A  G  E+AI LF +M      P++ TF  
Sbjct: 350 KCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVG 406

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
            L+A      +  G  +   + K   VE  +     ++DL  +   + EA K+   +P  
Sbjct: 407 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPT- 465

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
                                            + +   +  LL       ++++G +  
Sbjct: 466 ---------------------------------EPTPAVWGALLGACRKHGNVELGER-- 490

Query: 299 TQTIVTTAISEVKVANS-----LVDMYAKCGRFEEAKEIFANLSH--ISTVPWTAMI 348
               V   + E++  NS     L ++YAK GR+EE  E+   +    I T P T++I
Sbjct: 491 ----VGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 543



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 180/421 (42%), Gaps = 83/421 (19%)

Query: 7   VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
           VSTN  +S         ++  +F+ +       W  +I    + N+  +A  L+ +M   
Sbjct: 80  VSTNRYLS-------FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVV- 131

Query: 67  GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNS-------------------- 106
             S P+  T+  +L  CS+     E +QVHA ++K G                       
Sbjct: 132 AHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191

Query: 107 -----------ILIIC-NSLVDSYCKI------------------------------RC- 123
                      +  +C N+++D Y +                               RC 
Sbjct: 192 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCG 251

Query: 124 -LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +++AR  F EM ++D +S++A+I G+ +EG   EA+++F +MQ    +P  F   + LS
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 311

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  +  GR +H +  + +   +  +  +L+D+Y+K   +  A ++F +M   +  S
Sbjct: 312 ACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSS 371

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +N MI   A + + ++++ LF ++       ++  F  +L+  A+   +Q G  I     
Sbjct: 372 WNAMIGGLAMHGRAEDAIDLFSKMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMR 428

Query: 303 VTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISAYVQKGNL 357
               +  +++    +VD+  + G   EA+++   +S I T P    W A++ A  + GN+
Sbjct: 429 KEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV---VSSIPTEPTPAVWGALLGACRKHGNV 485

Query: 358 E 358
           E
Sbjct: 486 E 486


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/663 (33%), Positives = 367/663 (55%), Gaps = 7/663 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR--TDGGS 69
           L+  Y K  +L  A   F+ M +R +VSW   I G  Q  Q+    +LFV M+    G S
Sbjct: 177 LVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVS 236

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P Y   A++   C+     +   Q+HA  IK  +++  ++  ++VD Y K   L  ARR
Sbjct: 237 QPAY---ASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARR 293

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F  +P     + NA++ G  + GL  EA++LF  M   G      + +   SA   +  
Sbjct: 294 AFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKG 353

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
              G QVH   +K+ F  +V V NA+LDLY K   +VEA  +F EM + D VS+N +I  
Sbjct: 354 YLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAA 413

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
              NE Y++++    E+     +   F + ++L   A    L+ G  +H + I +    +
Sbjct: 414 LEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLD 473

Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             V++++VDMY KCG   EA+++   +     V W ++IS +      EEA   F EM  
Sbjct: 474 AFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLD 533

Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
             +  D  T+A++L   A LA++ LGKQ+H  +I+   + + +  S L+DMYAK G++ D
Sbjct: 534 IGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPD 593

Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           ++  F++  + + VSWNA+I   A +G     L+ FE M Q+   P+  + ++VL ACSH
Sbjct: 594 SLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSH 653

Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
            GL+++G +YF  MT +YKL P+ EH+A MVDIL RS    EA K +  MP E D ++W 
Sbjct: 654 VGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWK 713

Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           ++++ C+I +++E A+ AA  + +++   D++ Y+ +SN+YA +G+W  VS+ ++ MR+ 
Sbjct: 714 TLLSICKIRQDVEVAETAASNVLRLDP-DDSSVYILLSNVYAESGKWVDVSRTRRLMRQG 772

Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
            ++K    SW+E++S++H F A D++HP++ E+   + NL+ EMK  GY+P  S    + 
Sbjct: 773 RLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP-ASALFAEV 831

Query: 670 DEE 672
           DEE
Sbjct: 832 DEE 834



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 283/566 (50%), Gaps = 19/566 (3%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           MP+++TVS N +++ Y  +G+   A  LF +M D   VSW  L+ GY Q+  FR++  L 
Sbjct: 65  MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
           V+M   G + PD  T A LL  C   +     +Q+HA  +K G    +   ++LVD Y K
Sbjct: 125 VEMARRGVA-PDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
            R L+ A R F  M +++SVS+ A I G  +       ++LFV+MQ LG   S   +A+ 
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
             +   +  ++  RQ+HA  +K  F  +  V  A++D+Y+K D +V+AR+ F  +P    
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
            + N M+          E+L+LF+ +  +         S + S  A       G Q+H  
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            I +    +V V N+++D+Y KC    EA  +F  +    +V W A+I+A  Q    E+ 
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
           +    EM R  +  D  T+ S+L+A A L SL  G  +H   I+SG   + F  S ++DM
Sbjct: 424 IAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDM 483

Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
           Y K G + +A +    +  + +VSWN++IS  + N  ++   K F +M+  G +PD  + 
Sbjct: 484 YCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTY 543

Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS-MVDILCRSG-------CFDEA 532
            +VL  C++   IE G Q    + ++  L    E+ +S +VD+  + G        F++A
Sbjct: 544 ATVLDTCANLATIELGKQIHGQIIKQEML--GDEYISSTLVDMYAKCGNMPDSLLMFEKA 601

Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIH 558
           +KL        D + W+++I    +H
Sbjct: 602 QKL--------DFVSWNAMICGYALH 619



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 257/564 (45%), Gaps = 66/564 (11%)

Query: 96  HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS---------------- 139
           HA ++  G+     + N L+  Y +      AR VF  MP +D+                
Sbjct: 27  HARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDT 86

Query: 140 ---------------VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
                          VS+NAL++G+ + G+  +++ L VEM   G  P   T A  L A 
Sbjct: 87  GAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKAC 146

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            GL D+ALG Q+HA  VKT    +V   +AL+D+Y K   + +A + F  M E + VS+ 
Sbjct: 147 GGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWG 206

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
             I     NEQY   L+LF ++Q      SQ  ++++    A    L   RQ+H   I  
Sbjct: 207 AAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKN 266

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
              ++  V  ++VD+YAK     +A+  F +L + +     AM+   V+ G   EAL LF
Sbjct: 267 KFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLF 326

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
             M R+ I  D  + + +  A AE+     G Q+H   I+SGF  +V   +A+LD+Y K 
Sbjct: 327 QFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKC 386

Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
            +L +A   F+EM +R+ VSWNA+I+A  QN   + T+    +M++ G +PD  +  SVL
Sbjct: 387 KALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVL 446

Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL--------- 535
            AC+    +E G    +    K  L       +++VD+ C+ G   EA+KL         
Sbjct: 447 KACAGLQSLEYG-SVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQEL 505

Query: 536 -------------------------MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
                                    M  +  +PD   +++V+++C     +E  K+   Q
Sbjct: 506 VSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQ 565

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAG 594
           + K E L D      + ++YA  G
Sbjct: 566 IIKQEMLGDEYISSTLVDMYAKCG 589



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 243/551 (44%), Gaps = 80/551 (14%)

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           F+    L AG G + +A G+  HA ++ + F+   FV+N LL +Y++      AR +F  
Sbjct: 5   FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64

Query: 235 MPEVDGVSYNVMITCYA----------------------WNE---------QYKESLKLF 263
           MP  D VS+N M+T YA                      WN           +++S+ L 
Sbjct: 65  MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124

Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC 323
            E+        +   + LL       DL +G QIH   + T    +V+  ++LVDMY KC
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKC 184

Query: 324 GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
              E+A   F  +   ++V W A I+  VQ       L LF++M R  +   Q  +AS+ 
Sbjct: 185 RSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVF 244

Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
           R+ A +  LS  +QLH+  I++ F ++   G+A++D+YAK+ SL DA + F  +P   + 
Sbjct: 245 RSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ 304

Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS-----------HCGL 492
           + NA++    + G     L+ F+ M +SG   D VSL  V SAC+           HC  
Sbjct: 305 ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLA 364

Query: 493 IEEGLQY--------------FNSMTQKYKLRPKKEH-----YASMVDILCRSGCFDEAE 533
           I+ G                   ++ + Y +  + E      + +++  L ++ C+++  
Sbjct: 365 IKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 424

Query: 534 KLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
             + +M     EPD+  + SV+ +C   ++LE+      +  K     DA     + ++Y
Sbjct: 425 AYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMY 484

Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
              G    +++ +K     G +++   SW  + S          L+ Q+ E ++      
Sbjct: 485 CKCGM---ITEAQKLHDRIGGQELV--SWNSIISGF-------SLNKQSEEAQK----FF 528

Query: 651 QEMKKEGYKPD 661
            EM   G KPD
Sbjct: 529 SEMLDIGVKPD 539



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 35/212 (16%)

Query: 377 ATFASI--LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTF 434
           ATF+ +  L A A  ++L+ G+  H+ ++ SGFM   F  + LL MYA+ G    A   F
Sbjct: 3   ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62

Query: 435 KEMPERNIVSWNALISACAQNGDAQATLKSFE---------------------------- 466
             MP R+ VSWN +++A A  GD  A    F                             
Sbjct: 63  DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122

Query: 467 ---DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
              +M + G  PD  +L  +L AC     +  G+Q  +++  K  L       +++VD+ 
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQ-IHAVAVKTGLEMDVRAGSALVDMY 181

Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSC 555
            +    ++A +    M  E + + W + I  C
Sbjct: 182 GKCRSLEDALRFFHGMG-ERNSVSWGAAIAGC 212


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/663 (35%), Positives = 380/663 (57%), Gaps = 13/663 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQK-----NQFREAFKLFV--D 62
           N LI  Y K G+L  A+ +F ++  +  VS+  LI G S       N   E F+  +  +
Sbjct: 47  NNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANN 106

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  D  + P   T A L  GC+      +  QVH   IK      + + +SLV+ YCK+ 
Sbjct: 107 ILPDAHTFPGVFTAAALNLGCN-----FDARQVHVLGIKTASIDDVFVGSSLVNFYCKVG 161

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
           C+  AR++F  MP+++ VS+  +I+G+A + + +EA+ +F  M+ +    ++F F + LS
Sbjct: 162 CVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLS 221

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A V    +  G+QVH  VVK   +E V V NAL+ +Y+K   +  +  LF    + + ++
Sbjct: 222 ALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAIT 281

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           ++ +IT Y+      ++LKLF ++ +  F  S+F    +L   ++   ++ G+Q H   +
Sbjct: 282 WSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLL 341

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
            +   +++  A +LVDMYAK G   +A++ F  L     V WT++I+ YVQ G  EEAL+
Sbjct: 342 KSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALS 401

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           ++  M    I  ++ T AS+L+A + LA+L  GKQ+H+  I+ G    +   SAL  MYA
Sbjct: 402 MYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYA 461

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K GSL++ +  F+ M +R+IVSWNA+IS  +QNG  +  L+ FE+M   G +PD ++ ++
Sbjct: 462 KCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVT 521

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VLSACSH G+++ G  YFN M  ++ L P+ EHYA MVD+L R+G  +EA++ +     +
Sbjct: 522 VLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIID 581

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
               +W  ++ +CR H N E    A ++L ++   R+++ YV +S+IY   G+   V +V
Sbjct: 582 HGMCLWRILLPACRNHCNYELGAYAGEKLMELGS-RESSAYVLLSSIYTAMGRLADVVRV 640

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           ++ M+ RGVRK T  SW+ELKS VHVF   D++HPQ  EI+  I  L + MK +GY+P  
Sbjct: 641 RRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRPGH 700

Query: 663 SCA 665
             A
Sbjct: 701 ESA 703



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 275/520 (52%), Gaps = 18/520 (3%)

Query: 71  PDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NSILIICNSLVDSYCKIRCLDLARR 129
           P   +F  LL   ++  +  +   +HA IIK  Y +S   + N+L+  Y K   L  A+ 
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEE--AIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
           VF+ +  K+ VS+N LI G +  G       ++LF  M      P   TF    +A    
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA---- 120

Query: 188 ADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A + LG     RQVH   +KT  +++VFV ++L++ Y K  CV EARKLF  MPE + VS
Sbjct: 121 AALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVS 180

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  MI+ YA  +  KE+L +F  ++    + ++F F+++LS +     +  G+Q+H   +
Sbjct: 181 WTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVV 240

Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALN 362
               +  V V N+LV MYAKCG    +  +F   S  + + W+A+I+ Y Q G+  +AL 
Sbjct: 241 KNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALK 300

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           LF +M  A     + T   +L+A +++A++  GKQ H ++++SG+ + +++ +AL+DMYA
Sbjct: 301 LFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYA 360

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G   DA + F  + E ++V W ++I+   QNG  +  L  +  M      P+ +++ S
Sbjct: 361 KFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMAS 420

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL ACS+   +E+G Q  ++ T KY L P+    +++  +  + G  +E   +  +M  +
Sbjct: 421 VLKACSNLAALEQGKQ-IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQ 478

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
            D + W+++I+    + +     + A +LF+  +L    P
Sbjct: 479 RDIVSWNAMISGLSQNGH----GREALELFEEMRLEGTKP 514



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 157/359 (43%), Gaps = 47/359 (13%)

Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEAKEIFANL 336
           F  LL   A++  L+ G+ +H   I    +S    +AN+L+  YAKCG    AK +F NL
Sbjct: 10  FYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENL 69

Query: 337 SHISTVPWTAMISAYVQKGNLEE--ALNLFIEMCRANISADQATFASILRASAELASLSL 394
            H + V +  +I      G+      L LF  M   NI  D  TF  +  A    A+L+L
Sbjct: 70  KHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA----AALNL 125

Query: 395 G-----KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
           G     +Q+H   I++  + +VF GS+L++ Y K G + +A + F  MPERN+VSW  +I
Sbjct: 126 GCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMI 185

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA--CS---------HCGLIEEGLQ 498
           S  A    A+  L  F  M       +     SVLSA  C          HC +++ G+ 
Sbjct: 186 SGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVL 245

Query: 499 YF----NSMTQKYKLRPKKEHYASMVDILC----------------RSGCFDEAEKLMAQ 538
            F    N++   Y  +    +Y+ M+  +C                ++G   +A KL ++
Sbjct: 246 EFVSVLNALVTMYA-KCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSK 304

Query: 539 M---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
           M    F P E     V+ +C     +E  K+    L K           A+ ++YA  G
Sbjct: 305 MHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFG 363


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/579 (37%), Positives = 323/579 (55%), Gaps = 2/579 (0%)

Query: 172  PSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            PS  T   AL +   L   +  G Q+HA  +K     N  V  +LL LY+K   +  A++
Sbjct: 523  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582

Query: 231  LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
            +F EMP    V +  +IT Y      +E++ + R           F    +L+  A   D
Sbjct: 583  VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642

Query: 291  LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
            L  G  +            V VA + VD+Y KCG   +A+E+F  + H   V W AM+  
Sbjct: 643  LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702

Query: 351  YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
            Y   G+  EAL+LF+ M    +  D    A  L A   L +L LG+Q    V    F+ N
Sbjct: 703  YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 762

Query: 411  VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
               G+AL+DMYAK GS  +A   F++M +++I+ WNA+I      G  +        M +
Sbjct: 763  PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 822

Query: 471  SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            SG + +  + + +L +C+H GLI++G +YF++MT+ Y + P+ EHY  MVD+L R+G   
Sbjct: 823  SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 882

Query: 531  EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
            EA +L+  MP   + ++  +++  C+IH+N E A+    QL  +E   ++  YV +SNIY
Sbjct: 883  EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPW-NSGNYVMLSNIY 941

Query: 591  AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
            +  G+WE  ++++  M+ +GV KV A SWVE + KVH F   D+ HP +++I +K++ L 
Sbjct: 942  SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 1001

Query: 651  QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
             EMK  GY+P T   + D ++E K  +L +HSE+LAIAF L+ T  G  I V KNLR C+
Sbjct: 1002 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 1061

Query: 711  DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIKL+S+IT REI VRD++RFH F+DG CSC D+W
Sbjct: 1062 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 7/388 (1%)

Query: 70  DPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P ++T    L   S    P  A E  Q+HA  +K   ++   +  SL+  Y K   L  
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGE--QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHR 579

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+RVF EMP   +V + ALIT +   G   EA+ +       G +P  FT    L+A   
Sbjct: 580 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 639

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +AD+A G  V     +    ++VFVA A +DLY K   + +AR++F +M   D V++  M
Sbjct: 640 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 699

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N   +E+L LF  +Q        +  +  LS       L +GRQ          
Sbjct: 700 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 759

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +    +  +L+DMYAKCG   EA  +F  +     + W AMI      G+ + A  L  +
Sbjct: 760 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 819

Query: 367 MCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M ++ +  +  TF  +L +      +  G++  H+          +     ++D+ +++G
Sbjct: 820 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 879

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L++A Q   +MP   N V   AL+  C
Sbjct: 880 LLQEAHQLVDDMPMPANAVILGALLGGC 907



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 6/328 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G L  A+ +F+ M   + V WT LI  Y      REA  +  +   + G  P
Sbjct: 567 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRP 625

Query: 72  DYVTFATLLSGCSE-PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T   +L+ C+   D A  E +   A+  + G    + +  + VD Y K   +  AR 
Sbjct: 626 DSFTAVRVLTACARIADLATGETVWRAAE--QEGVAQSVFVATAAVDLYVKCGEMAKARE 683

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KD+V++ A++ G+A  G   EA+ LF+ MQ  G KP  +  A ALSA   L  
Sbjct: 684 VFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGA 743

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ    V    F++N  +  AL+D+Y+K    VEA  +F +M + D + +N MI  
Sbjct: 744 LDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 803

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
                  K +  L  +++ +    +   F  LL    +   +Q GR+  H  T +     
Sbjct: 804 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 863

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++    +VD+ ++ G  +EA ++  ++
Sbjct: 864 RIEHYGCMVDLLSRAGLLQEAHQLVDDM 891



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YVK G +A ARE+F+ M  + AV+W  ++GGY+     REA  LF+ M+ + G  PD   
Sbjct: 672 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE-GMKPDCYA 730

Query: 76  FATLLSGCSE---PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
            A  LS C+     D   + I++  D  +F  N +L    +L+D Y K      A  VF+
Sbjct: 731 VAGALSACTRLGALDLGRQAIRM-VDWDEFLDNPVL--GTALIDMYAKCGSTVEAWVVFQ 787

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           +M +KD + +NA+I G    G  + A  L  +M+  G K +D TF   L +      I  
Sbjct: 788 QMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQD 847

Query: 193 GRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           GR+  H      +    +     ++DL S+   + EA +L  +MP
Sbjct: 848 GRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 892


>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Glycine max]
          Length = 630

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/618 (38%), Positives = 363/618 (58%), Gaps = 13/618 (2%)

Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
           + ++N  +   +K+    EA+ L+  M    F P+ FTF   L +   L+      Q+HA
Sbjct: 19  TTAWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHA 78

Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
            V++T    + +  ++L++ Y+K      ARK+F EMP    + YN MI+ Y++N +   
Sbjct: 79  HVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPN-PTICYNAMISGYSFNSKPLH 137

Query: 259 SLKLFRELQFTRFDRSQFPFS----TLLSVVAN---KLDLQIGRQIHTQTIVTTAISEVK 311
           ++ LFR+++    D      +    TLLS+V+       L IG  +H   +    ++++ 
Sbjct: 138 AVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLA 197

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VANSLV MY KCG  E A+++F  +     + W AMIS Y Q G+    L ++ EM  + 
Sbjct: 198 VANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSG 257

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +SAD  T   ++ A A L +  +G+++   + R GF  N F  +AL++MYA+ G+L  A 
Sbjct: 258 VSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAR 317

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
           + F    E+++VSW A+I     +G  +  L+ F++MV+S  +PD    +SVLSACSH G
Sbjct: 318 EVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAG 377

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L + GL+YF  M +KY L+P  EHY+ +VD+L R+G  +EA  L+  M  +PD  +W ++
Sbjct: 378 LTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGAL 437

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +C+IHKN E A+ A   + ++E   +   YV +SNIY  A   E VS+V+  MRER +
Sbjct: 438 LGACKIHKNAEIAELAFQHVVELEPT-NIGYYVLLSNIYTDANNLEGVSRVRVMMRERKL 496

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           RK   YS+VE K K+++F + D  HPQT +I R ++ L + + KE + P+  C      E
Sbjct: 497 RKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDEL-ESLVKEVHPPNEKC--QGRSE 553

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E+ + +   HSE+LAIAFAL+NT  G+ I VMKNLR C DCH  IKL+SKI  R+  VRD
Sbjct: 554 ELLIGT-GVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVRD 612

Query: 732 SSRFHHFKDGFCSCRDFW 749
           ++RFHHF+DG CSC+D+W
Sbjct: 613 ATRFHHFRDGICSCKDYW 630



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 228/483 (47%), Gaps = 17/483 (3%)

Query: 39  SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHAD 98
           +W   +   S++ Q+REA  L+  M       P+  TF  LL  C+         Q+HA 
Sbjct: 21  AWNNQLRQLSKQRQYREALTLYRHM-LRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAH 79

Query: 99  IIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEA 158
           +I+ G        +SL+++Y K      AR+VF EMP   ++ +NA+I+G++       A
Sbjct: 80  VIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNP-TICYNAMISGYSFNSKPLHA 138

Query: 159 IKLFVEMQH-------LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
           + LF +M+        +    +  T  + +S       + +G  +H   V+  FV ++ V
Sbjct: 139 VCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAV 198

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
           AN+L+ +Y K   V  ARK+F EM   D +++N MI+ YA N   +  L+++ E++ +  
Sbjct: 199 ANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGV 258

Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
                    ++S  AN     IGR++  +           + N+LV+MYA+CG    A+E
Sbjct: 259 SADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRARE 318

Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
           +F      S V WTA+I  Y   G+ E AL LF EM  + +  D+  F S+L A +    
Sbjct: 319 VFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGL 378

Query: 392 LSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNA 447
              G +    + R  G        S ++D+  ++G L++A+   K M   P+  +  W A
Sbjct: 379 TDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAV--WGA 436

Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
           L+ AC  + +A+    +F+ +V+   +P ++    +LS         EG+     M ++ 
Sbjct: 437 LLGACKIHKNAEIAELAFQHVVE--LEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRER 494

Query: 508 KLR 510
           KLR
Sbjct: 495 KLR 497



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 200/434 (46%), Gaps = 24/434 (5%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+  T S+  LI+ Y K      AR++F+ M + T + +  +I GYS  ++   A  LF 
Sbjct: 87  PDPYTRSS--LINTYAKCSLHHHARKVFDEMPNPT-ICYNAMISGYSFNSKPLHAVCLFR 143

Query: 62  DMRTD--GGSDPDY----VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV 115
            MR +   G D D     VT  +L+SGCS        + +H   ++FG+ + L + NSLV
Sbjct: 144 KMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANSLV 203

Query: 116 DSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDF 175
             Y K   ++LAR+VF EM  +D +++NA+I+G+A+ G     ++++ EM+  G      
Sbjct: 204 TMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADAV 263

Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
           T    +SA   L    +GR+V   + +  F  N F+ NAL+++Y++   +  AR++F   
Sbjct: 264 TLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVFDRS 323

Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
            E   VS+  +I  Y  +   + +L+LF E+  +     +  F ++LS  ++      G 
Sbjct: 324 GEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGL 383

Query: 296 QIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
           +   +      +       S +VD+  + GR EEA  +  ++        W A++ A   
Sbjct: 384 EYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKI 443

Query: 354 KGNLE------------EALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HS 400
             N E            E  N+   +  +NI  D      + R    +    L K   +S
Sbjct: 444 HKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKLRKDPGYS 503

Query: 401 FVIRSGFMSNVFSG 414
           +V   G M+  +SG
Sbjct: 504 YVEYKGKMNLFYSG 517


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/537 (37%), Positives = 328/537 (61%), Gaps = 6/537 (1%)

Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
           +F+ N L+++Y K + + +A +LF +MP+ + +S+  MI+ Y+  + ++++L+L   +  
Sbjct: 48  MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107

Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
                + + +S++L       D+   R +H   I     S+V V ++L+D++AK G  E+
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPED 164

Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
           A  +F  +     + W ++I  + Q    + AL LF  M RA   A+QAT  S+LRA   
Sbjct: 165 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 224

Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
           LA L LG Q H  +++  +  ++   +AL+DMY K GSL+DA + F +M ER++++W+ +
Sbjct: 225 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
           IS  AQNG +Q  LK FE M  SG +P+ ++++ VL ACSH GL+E+G  YF SM + Y 
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 342

Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
           + P +EHY  M+D+L ++G  D+A KL+ +M  EPD + W +++ +CR+ +N+  A+ AA
Sbjct: 343 INPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 402

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
            ++  ++   DA  Y  +SNIYA + +W+SV +++K MR+ G++K    SW+E+  ++H 
Sbjct: 403 KKVIALDP-EDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHA 461

Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
           F   DE HPQ  E+ +K+  L+  +   GY P+T+  L D + E   +SL++HSE+LA+A
Sbjct: 462 FIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 521

Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSC 745
           F L+  P    I + KNLR C DCH   KL SK+  R I +RD  R+HHF+DG CSC
Sbjct: 522 FGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 194/383 (50%), Gaps = 7/383 (1%)

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           D  T++ L+  C      +E   +   +   G+  ++ + N L++ Y K   L+ A ++F
Sbjct: 12  DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            +MPQ++ +S+  +I+ ++K  ++++A++L V M   G +P+ +T+++ L A  G++D+ 
Sbjct: 72  DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV- 130

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             R +H  ++K     +V+V +AL+D+++K     +A  +F EM   D + +N +I  +A
Sbjct: 131 --RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188

Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
            N +   +L+LF+ ++   F   Q   +++L        L++G Q H   +      ++ 
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLI 246

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           + N+LVDMY KCG  E+A+ +F  +     + W+ MIS   Q G  +EAL LF  M  + 
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG 306

Query: 372 ISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
              +  T   +L A +    L  G     S     G          ++D+  K+G L DA
Sbjct: 307 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDA 366

Query: 431 IQTFKEMP-ERNIVSWNALISAC 452
           ++   EM  E + V+W  L+ AC
Sbjct: 367 VKLLNEMECEPDAVTWRTLLGAC 389



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 180/344 (52%), Gaps = 8/344 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
            N+LI+ YVK   L  A +LF+ M  R  +SWT +I  YS+    ++A +L V M  DG 
Sbjct: 51  VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDG- 109

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             P+  T++++L  C   +  +++  +H  IIK G  S + + ++L+D + K+   + A 
Sbjct: 110 VRPNVYTYSSVLRAC---NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDAL 166

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
            VF EM   D++ +N++I GFA+   ++ A++LF  M+  GF     T  + L A  GLA
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 226

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
            + LG Q H  +VK  + +++ + NAL+D+Y K   + +AR++F +M E D ++++ MI+
Sbjct: 227 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMIS 284

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
             A N   +E+LKLF  ++ +    +      +L   ++   L+ G            I+
Sbjct: 285 GLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIN 344

Query: 309 EVKVA-NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
             +     ++D+  K G+ ++A ++   +      V W  ++ A
Sbjct: 345 PGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 48/318 (15%)

Query: 374 ADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           AD AT++ +++      ++  G  +   +  +G    +F  + L++MY K   L DA Q 
Sbjct: 11  ADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQL 70

Query: 434 FKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS----- 488
           F +MP+RN++SW  +ISA ++    Q  L+    M++ G +P+  +  SVL AC+     
Sbjct: 71  FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV 130

Query: 489 ---HCGLIEEGLQ---YFNS-MTQKYKLRPKKEHYASMVDILC----------------- 524
              HCG+I+EGL+   Y  S +   +    + E   S+ D +                  
Sbjct: 131 RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 190

Query: 525 -RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
            RS    E  K M +  F  ++   +SV+ +C     LE   +A   + K ++  D    
Sbjct: 191 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILN 248

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            A+ ++Y   G  E   +V   M+ER V      +W  + S +             N   
Sbjct: 249 NALVDMYCKCGSLEDARRVFNQMKERDV-----ITWSTMISGL-----------AQNGYS 292

Query: 644 RKIENLMQEMKKEGYKPD 661
           ++   L + MK  G KP+
Sbjct: 293 QEALKLFELMKSSGTKPN 310



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 34/181 (18%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           +Q+ +  N L+  Y K G+L  AR +FN M +R  ++W+ +I G +Q    +EA KLF  
Sbjct: 242 DQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           M++  G+ P+Y+T   +L  CS           HA +++              D +   R
Sbjct: 302 MKSS-GTKPNYITIVGVLFACS-----------HAGLLE--------------DGWYYFR 335

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +   ++++   P ++   +  +I    K G  ++A+KL  EM+    +P   T+   L 
Sbjct: 336 SM---KKLYGINPGRE--HYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLG 387

Query: 183 A 183
           A
Sbjct: 388 A 388


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/579 (37%), Positives = 323/579 (55%), Gaps = 2/579 (0%)

Query: 172  PSDFTFAAALSAGVGLA-DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
            PS  T   AL +   L   +  G Q+HA  +K     N  V  +LL LY+K   +  A++
Sbjct: 547  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606

Query: 231  LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
            +F EMP    V +  +IT Y      +E++ + R           F    +L+  A   D
Sbjct: 607  VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666

Query: 291  LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
            L  G  +            V VA + VD+Y KCG   +A+E+F  + H   V W AM+  
Sbjct: 667  LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726

Query: 351  YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
            Y   G+  EAL+LF+ M    +  D    A  L A   L +L LG+Q    V    F+ N
Sbjct: 727  YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 786

Query: 411  VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
               G+AL+DMYAK GS  +A   F++M +++I+ WNA+I      G  +        M +
Sbjct: 787  PVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 846

Query: 471  SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
            SG + +  + + +L +C+H GLI++G +YF++MT+ Y + P+ EHY  MVD+L R+G   
Sbjct: 847  SGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQ 906

Query: 531  EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
            EA +L+  MP   + ++  +++  C+IH+N E A+    QL  +E   ++  YV +SNIY
Sbjct: 907  EAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPW-NSGNYVMLSNIY 965

Query: 591  AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
            +  G+WE  ++++  M+ +GV KV A SWVE + KVH F   D+ HP +++I +K++ L 
Sbjct: 966  SNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELG 1025

Query: 651  QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
             EMK  GY+P T   + D ++E K  +L +HSE+LAIAF L+ T  G  I V KNLR C+
Sbjct: 1026 LEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCS 1085

Query: 711  DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            DCH AIKL+S+IT REI VRD++RFH F+DG CSC D+W
Sbjct: 1086 DCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 7/388 (1%)

Query: 70  DPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           +P ++T    L   S    P  A E  Q+HA  +K   ++   +  SL+  Y K   L  
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGE--QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHR 603

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           A+RVF EMP   +V + ALIT +   G   EA+ +       G +P  FT    L+A   
Sbjct: 604 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 663

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
           +AD+A G  V     +    ++VFVA A +DLY K   + +AR++F +M   D V++  M
Sbjct: 664 IADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAM 723

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
           +  YA N   +E+L LF  +Q        +  +  LS       L +GRQ          
Sbjct: 724 VGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEF 783

Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
           +    +  +L+DMYAKCG   EA  +F  +     + W AMI      G+ + A  L  +
Sbjct: 784 LDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQ 843

Query: 367 MCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAKSG 425
           M ++ +  +  TF  +L +      +  G++  H+          +     ++D+ +++G
Sbjct: 844 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAG 903

Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISAC 452
            L++A Q   +MP   N V   AL+  C
Sbjct: 904 LLQEAHQLVDDMPMPANAVILGALLGGC 931



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 6/328 (1%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           L+S Y K G L  A+ +F+ M   + V WT LI  Y      REA  +  +   + G  P
Sbjct: 591 LLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRP 649

Query: 72  DYVTFATLLSGCSE-PDTA-NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D  T   +L+ C+   D A  E +   A+  + G    + +  + VD Y K   +  AR 
Sbjct: 650 DSFTAVRVLTACARIADLATGETVWRAAE--QEGVAQSVFVATAAVDLYVKCGEMAKARE 707

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           VF +M  KD+V++ A++ G+A  G   EA+ LF+ MQ  G KP  +  A ALSA   L  
Sbjct: 708 VFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGA 767

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + LGRQ    V    F++N  +  AL+D+Y+K    VEA  +F +M + D + +N MI  
Sbjct: 768 LDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILG 827

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
                  K +  L  +++ +    +   F  LL    +   +Q GR+  H  T +     
Sbjct: 828 LGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISP 887

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANL 336
            ++    +VD+ ++ G  +EA ++  ++
Sbjct: 888 RIEHYGCMVDLLSRAGLLQEAHQLVDDM 915



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 16  YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
           YVK G +A ARE+F+ M  + AV+W  ++GGY+     REA  LF+ M+ + G  PD   
Sbjct: 696 YVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE-GMKPDCYA 754

Query: 76  FATLLSGCSE---PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
            A  LS C+     D   + I++  D  +F  N +L    +L+D Y K      A  VF+
Sbjct: 755 VAGALSACTRLGALDLGRQAIRM-VDWDEFLDNPVL--GTALIDMYAKCGSTVEAWVVFQ 811

Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
           +M +KD + +NA+I G    G  + A  L  +M+  G K +D TF   L +      I  
Sbjct: 812 QMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQD 871

Query: 193 GRQ-VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           GR+  H      +    +     ++DL S+   + EA +L  +MP
Sbjct: 872 GRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMP 916


>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 701

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/600 (35%), Positives = 349/600 (58%), Gaps = 10/600 (1%)

Query: 157 EAIKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANAL 215
           EA +LF  ++    FK    T+ A + A + L  I   ++V+ F++   F    ++ N +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYMMNRI 164

Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
           L ++ K   +++AR+LF EMPE +  SYN +I+ +     Y+E+ +LF+ +     D   
Sbjct: 165 LLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDCET 224

Query: 276 FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFAN 335
             F+ +L   A    + +G+Q+H   +    +    V+  L+DMY+KCG  E+A+  F +
Sbjct: 225 HTFAVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFES 284

Query: 336 LSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG 395
           +   +TV W  +++ Y   G  EEAL L  EM  + +S DQ T + ++R S  LA L L 
Sbjct: 285 MPEKTTVAWNNIVAGYALHGYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAKLELT 344

Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
           KQ H+ +IRSGF S + + +AL+D Y+K G +  A   F ++P +NI+SWNAL+   A +
Sbjct: 345 KQAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404

Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
           G     ++ FE M+ +   P+ V+ L+VLSAC++ GL E+G + F SM++ + ++P+  H
Sbjct: 405 GRGTDAVRLFERMIAAKVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464

Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM- 574
           YA M+++L R G  DEA   + + P +    MW++++N+CR+  NLE  +  A++L+ M 
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQGNLELGRVVAEKLYGMG 524

Query: 575 -EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAND 633
            EKL +   YV + N+Y   G+    + V + +  +G+  + A +WVE+  + H F + D
Sbjct: 525 PEKLGN---YVVLYNMYNSMGKTAEAAGVLETLESKGLSMIPACTWVEVGDQTHSFLSGD 581

Query: 634 ELHPQTNEIRR----KIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
                   ++R    K++ LM+E+ + GY  +    L D DE+ +    +YHSE+LAIA+
Sbjct: 582 RFDSYNETVKREVYQKVDELMEEIYEYGYLAEEKNLLPDVDEKEEERVGRYHSEKLAIAY 641

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            L+NTPE +P+ + +N R C DCH  ++ IS +TGRE+ VRD+SRFHHFK+G CSC  +W
Sbjct: 642 GLMNTPEWNPLQITQNHRICKDCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 203/411 (49%), Gaps = 2/411 (0%)

Query: 51  NQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILII 110
           N+FREAF+LF  +           T+  L+  C    +   + +V+  II  G+     +
Sbjct: 101 NRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYM 160

Query: 111 CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF 170
            N ++  + K   +  ARR+F EMP+++  S+N++I+GF   G  EEA +LF  M     
Sbjct: 161 MNRILLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELS 220

Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
                TFA  L A  GL  + +G+Q+H   +K   V+N FV+  L+D+YSK   + +AR 
Sbjct: 221 DCETHTFAVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
            F  MPE   V++N ++  YA +   +E+L L  E++ +     QF  S ++ +      
Sbjct: 281 AFESMPEKTTVAWNNIVAGYALHGYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAK 340

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
           L++ +Q H   I +   SE+    +LVD Y+K GR + A+ +F  L   + + W A++  
Sbjct: 341 LELTKQAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400

Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH-SFVIRSGFMS 409
           Y   G   +A+ LF  M  A ++ +  TF ++L A A       G ++  S     G   
Sbjct: 401 YANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
                + ++++  + G L +AI   +  P +  V+ W AL++AC   G+ +
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQGNLE 511



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 209/455 (45%), Gaps = 28/455 (6%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N ++  +VK G +  AR LF+ M +R   S+  +I G+     + EAF+LF  M  +  S
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEEL-S 220

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
           D +  TFA +L   +   +     Q+H   +K G      +   L+D Y K   ++ AR 
Sbjct: 221 DCETHTFAVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
            F+ MP+K +V++N ++ G+A  G +EEA+ L  EM+  G     FT +  +     LA 
Sbjct: 281 AFESMPEKTTVAWNNIVAGYALHGYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAK 340

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
           + L +Q HA ++++ F   +    AL+D YSK   V  AR +F ++P  + +S+N ++  
Sbjct: 341 LELTKQAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
           YA + +  ++++LF  +   +   +   F  +LS  A     + G +I         I  
Sbjct: 401 YANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460

Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE--------- 358
             +  + ++++  + G  +EA          +TV  W A+++A   +GNLE         
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQGNLELGRVVAEKL 520

Query: 359 -----EALNLFIEMCRANISADQATFASILRASAELASLSL---------GKQLHSFVIR 404
                E L  ++ +     S  +   A+ +  + E   LS+         G Q HSF+  
Sbjct: 521 YGMGPEKLGNYVVLYNMYNSMGKTAEAAGVLETLESKGLSMIPACTWVEVGDQTHSFL-- 578

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPE 439
           SG   + ++ +   ++Y K   L + I  +  + E
Sbjct: 579 SGDRFDSYNETVKREVYQKVDELMEEIYEYGYLAE 613



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 1/179 (0%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           NT  +  LI  Y K G++  AR  F SM ++T V+W  ++ GY+      EA  L  +MR
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYALHGYSEEALCLLYEMR 317

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
            D G   D  T + ++   +         Q HA +I+ G+ S ++   +LVD Y K   +
Sbjct: 318 -DSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVANTALVDFYSKWGRV 376

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           D AR VF ++P+K+ +S+NAL+ G+A  G   +A++LF  M      P+  TF A LSA
Sbjct: 377 DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSA 435


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/530 (38%), Positives = 324/530 (61%), Gaps = 8/530 (1%)

Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL--S 283
           ++AR+ F E+P+ + V    M + Y  N     SL+LFR +  +         + L+  S
Sbjct: 1   MDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFS 60

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHIST 341
             A   D  +   +H             V N+++D YAK G    E A+++F  +     
Sbjct: 61  ASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DV 119

Query: 342 VPWTAMISAYVQKGNLEEALNLFIEMCR--ANISADQATFASILRASAELASLSLGKQLH 399
           V W +MI+ Y Q G   EA+ L+ +M      I  +    +++L A A   ++  GK +H
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179

Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
           + V+R G   NV+ G++++DMY+K G ++ A + F+++ E+NI+SW+A+I+    +G  Q
Sbjct: 180 NQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQ 239

Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
             L+ F +M +SG +P+ ++ +SVL+ACSH GL++EG  ++N+M Q++ +    EHY  M
Sbjct: 240 EALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCM 299

Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRD 579
           VD+L R+GC DEA  L+ +M  +PD  +W +++++CRIHKN+E A+ +  +LF+++   +
Sbjct: 300 VDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDA-SN 358

Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQT 639
           +  YV +SNIYA AG W+ V +++  ++ R + K   YS  ELK K+++F   D+ HPQ 
Sbjct: 359 SGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQH 418

Query: 640 NEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSP 699
            EI   +E L++ M++ GY P+T   LHD DEE K  +L+ HSE+LA+AFAL+N+   S 
Sbjct: 419 IEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSV 478

Query: 700 ILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           I ++KNLR C+DCH A+K I+KIT REI +RD  RFHHFKDG CSCRD+W
Sbjct: 479 IHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 8/343 (2%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM-RTDGGSDPDYVTFATLLSGC 83
           AR  F+ + D   V  T +  GY + N    + +LF  M  +D  S  D        S  
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 84  SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK--IRCLDLARRVFKEMPQKDSVS 141
           +          +HA I K G+     + N+++DSY K   R L++AR+VF  M ++D VS
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 121

Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAGVGLADIALGRQVHAF 199
           +N++I  +A+ G++ EAI L+ +M ++G   K +    +A L A      I  G+ +H  
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181

Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKES 259
           VV+    ENV+V  +++D+YSK   V  A + F ++ E + +S++ MIT Y  + + +E+
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 260 LKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVD 318
           L++F E++ +    +   F ++L+  ++   L  GR  +        I + V+    +VD
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301

Query: 319 MYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
           +  + G  +EA  +   +        W A++SA     N+E A
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELA 344



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 5/236 (2%)

Query: 4   QNTVSTNMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           +N    N ++  Y K G  +L  AR++F++M +R  VSW  +I  Y+Q     EA  L+ 
Sbjct: 85  RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 143

Query: 62  DM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            M    GG   + V  + +L  C+          +H  +++ G    + +  S+VD Y K
Sbjct: 144 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSK 203

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +++A R F+++ +K+ +S++A+ITG+   G  +EA+++F EM+  G +P+  TF + 
Sbjct: 204 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 263

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEM 235
           L+A      +  GR  +  + +   +E  V     ++DL  +  C+ EA  L  EM
Sbjct: 264 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEM 319



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N      ++  Y K G +  A   F  + ++  +SW+ +I GY    + +EA ++F +M
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 248

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANE-LIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
           +  G   P+Y+TF ++L+ CS     +E     +A   +FG  + +     +VD   +  
Sbjct: 249 KRSG-LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAG 307

Query: 123 CLDLARRVFKEMPQK-DSVSFNALIT 147
           CLD A  + KEM  K D+  + AL++
Sbjct: 308 CLDEAYSLIKEMKVKPDAAIWGALLS 333


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 325/558 (58%), Gaps = 8/558 (1%)

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
           R++HA V K+    + F+ + L+  Y+K     +A KLF +MP  D VS+N +I+   ++
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLIS--GFS 116

Query: 254 EQYKESLKLFRELQFTRFDRSQFPFS-TLLSVV-ANKLDLQIGRQIHTQTIVTTAISEVK 311
                SL  F  +   +F+ S  P   T+LS++ A    L  G+ IH   I      EVK
Sbjct: 117 RCLHMSLTAFYTM---KFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVK 173

Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
           VANSL++MY K G    A  +F  +   +TV W ++I+A V  G   E ++ F +M R  
Sbjct: 174 VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLG 233

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           I  D+ T  ++L+A   L    L + +H  +  +GF + +   +ALLD YAK G L  + 
Sbjct: 234 IEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASY 293

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F E+   + V+W A+++  A +G  +  +K FE M   G +PD V+   +LSACSH G
Sbjct: 294 GVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353

Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
           L+ EG  YFN M++ Y + P+ +HY+ MVD+L R G  ++A +++  MP EP+  +W ++
Sbjct: 354 LVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGAL 413

Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
           + +CR+H N+E  K+ A+ L  ME L D   Y+ +SN+Y+ +  W+  ++V+  ++ERG+
Sbjct: 414 LGACRVHGNIELGKEVAEHLINMEPL-DPRNYIMLSNMYSASRSWKDAAKVRALLKERGL 472

Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
           ++   YS +E  +K H F   D  HP+T +I  K+E L+ +++K GY   T   L D +E
Sbjct: 473 KRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEE 532

Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
           E+K + +  HSE+LAIAF L+ + EG  +++ KNLR C DCH+  KLIS I  R I +RD
Sbjct: 533 EVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRD 592

Query: 732 SSRFHHFKDGFCSCRDFW 749
             RFHHF DGFCSC D+W
Sbjct: 593 PKRFHHFSDGFCSCADYW 610



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 199/407 (48%), Gaps = 12/407 (2%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           + P+ +  A L++  S P  +N   ++HA + K        I + LV  Y K+   + A 
Sbjct: 36  ATPEAIVSALLIAVNSCPSISN-CREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAL 94

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           ++F +MP KD VS+N+LI+GF++  L+      +     +  KP++ T  + +SA  G  
Sbjct: 95  KLFDDMPHKDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGAL 153

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           D   G+ +H F +K      V VAN+L+++Y K   +  A +LF  +P+ + VS+N +I 
Sbjct: 154 DA--GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIA 211

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR---QIHTQTIVTT 305
               N   +E +  F +++    ++ +    T+L+++   L L +G+    IH     T 
Sbjct: 212 AQVTNGCAREGIDYFNKMRRLGIEQDE---GTILALLQACLHLGVGKLAESIHGLMFCTG 268

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFI 365
             +++ +A +L+D YAK GR   +  +F  +     V WTAM++ Y   G   EA+ LF 
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFE 328

Query: 366 EMCRANISADQATFASILRASAELASLSLGKQLHSFVIR-SGFMSNVFSGSALLDMYAKS 424
            M    +  D  TF  +L A +    ++ GK   + +    G    V   S ++D+  + 
Sbjct: 329 SMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC 388

Query: 425 GSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
           G L DA +  + MP E N   W AL+ AC  +G+ +   +  E ++ 
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLIN 435



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 166/351 (47%), Gaps = 6/351 (1%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           + L++ Y K G    A +LF+ M  +  VSW  LI G+S+      +   F  M+ +   
Sbjct: 78  DQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSV 135

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
            P+ VT  +++S C+    A + I  H   IK G    + + NSL++ Y K   L  A R
Sbjct: 136 KPNEVTILSMISACNGALDAGKYI--HGFGIKVGGTLEVKVANSLINMYGKSGDLTSACR 193

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
           +F+ +P  ++VS+N++I      G   E I  F +M+ LG +  + T  A L A + L  
Sbjct: 194 LFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
             L   +H  +  T F   + +A ALLD Y+K   +  +  +F E+   D V++  M+  
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313

Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTIVTTAIS 308
           YA +   +E++KLF  +     +     F+ LLS  ++   +  G+   +  + V     
Sbjct: 314 YAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEP 373

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
            V   + +VD+  +CG   +A E+  N+    +   W A++ A    GN+E
Sbjct: 374 RVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIE 424



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 110/208 (52%), Gaps = 20/208 (9%)

Query: 376 QATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFK 435
           +A  +++L A     S+S  +++H+ V +S    + F G  L+  Y K G  +DA++ F 
Sbjct: 39  EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 436 EMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIE 494
           +MP +++VSWN+LIS  ++      +L +F  M  +   +P+ V++LS++SAC+  G ++
Sbjct: 99  DMPHKDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALD 154

Query: 495 EGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI-- 552
            G +Y +    K     + +   S++++  +SG    A +L   +P +P+ + W+S+I  
Sbjct: 155 AG-KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAA 212

Query: 553 ---NSCRIHKNLEFAKKAADQLFKMEKL 577
              N C        A++  D   KM +L
Sbjct: 213 QVTNGC--------AREGIDYFNKMRRL 232


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/654 (33%), Positives = 362/654 (55%), Gaps = 32/654 (4%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           AR+VF  + Q+++ S++ L+  + +  + +EA++++ EM         +T ++ L+A   
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF---GEMPEV----- 238
           L D+  GR V     +  F ++V VA +L+ L++K  C+ EA  +F   G M ++     
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 239 ----------------------DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
                                 D VS+N MI  Y      K++  LF  +         +
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
            FS++L   A+   L+ GR +H +        +  + N+L+ MY +CG  E A+  F ++
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
                  W  M++AY Q    ++AL L+  M     + D+ TF+S++ + A L +L  GK
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300

Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
            +H      GF  +V  G+AL++MYAK GSL DA ++F  +  +++VSW+A+I+A AQ+G
Sbjct: 301 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 360

Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
            A+  L+    M   G   + V+  SVL ACSH G + EG+ YF  ++Q + +   +E+ 
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 420

Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
              +D+L R+G   EAE ++  MPF+   +   +++  C++H ++   K    ++  +E 
Sbjct: 421 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEP 480

Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
             +   YV ++N+YA AG+W+ V+++++ MR++GV++ T  S +E + K++ F+  D  +
Sbjct: 481 -ENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSN 539

Query: 637 PQTNEIRRKIENLMQEMK-KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
           P+  EIR ++E L   MK +EGY PDT    HD  ++ K E LK+HSE++A+ F LI +P
Sbjct: 540 PRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSP 599

Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            GS + ++KNLR C+DCH   KL SKITGR I VRD +RFHHF+ G CSC D+W
Sbjct: 600 PGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 37/469 (7%)

Query: 25  ARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCS 84
           AR++F+ +  R A SW+IL+  Y Q   ++EA +++ +M  +  S  D  T +++L+ C+
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEIS-IDAYTLSSVLAACT 59

Query: 85  EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ-------- 136
           +     E   V     + G+   +++  SL+  + K  CL+ A  VF+ M          
Sbjct: 60  KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119

Query: 137 ----------------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD 174
                                 KD VS+NA+I  +   G +++A  LF  M  LG  P  
Sbjct: 120 AMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDI 179

Query: 175 FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE 234
           +TF++ L A      +  GR +H  +    F  +  + N L+ +Y++   +  AR+ F  
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239

Query: 235 MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
           + + +  ++N M+  YA  ++ K++L L++ +    F   +F FS+++   A+   L+ G
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 299

Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
           + IH  +       +V +  +LV+MYAKCG   +AK+ F  +S+   V W+AMI+A  Q 
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 359

Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS---GFMSNV 411
           G+ EEAL L   M    I+ ++ T +S+L A +    L  G  +  F+  S   G   + 
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEG--IDYFMGLSQDFGIERDE 417

Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQ 459
            +    +D+  ++G LK+A      MP + + V+   L+  C  +GD +
Sbjct: 418 ENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVR 466



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 168/352 (47%), Gaps = 14/352 (3%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           ++ +S   +I  Y   G+L  ++ LF +M  +  VSW  +I  Y+     ++AF LF  M
Sbjct: 113 RDIISVTAMIGAYC--GSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRM 170

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
            T G + PD  TF+++L  C+ P    +   +H  I   G++    + N+L+  Y +   
Sbjct: 171 CTLGHT-PDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGS 229

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L+ ARR F  + +K+  ++N ++  +A+    ++A+ L+  M   GF P  FTF++ + +
Sbjct: 230 LESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDS 289

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              L  +  G+ +H       F ++V +  AL+++Y+K   + +A+K F  +   D VS+
Sbjct: 290 CASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSW 349

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH---TQ 300
           + MI   A +   +E+L+L   +      +++   S++L   ++   L  G       +Q
Sbjct: 350 SAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQ 409

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
                   E  V    +D+  + G  +EA+ +      + T+P+     A V
Sbjct: 410 DFGIERDEENTVG--FIDLLGRAGWLKEAEHV------LHTMPFKVSFVALV 453


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/653 (35%), Positives = 384/653 (58%), Gaps = 19/653 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N L++ Y K+G    A  +F ++ +   VSW  ++ G+ + +   +A    + M   G +
Sbjct: 117 NSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSD---DALNFALRMNFTGVA 173

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D VT  T+L+ CS+ +      Q+H+ I+K G +  + + N+L+  Y +   L  ARR
Sbjct: 174 -FDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARR 232

Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNE-EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
           VF EM  KD VS+NA+++G+A+EG +  EAI +F+EM   G K    +F  A+SA     
Sbjct: 233 VFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGK 292

Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
           +  LGRQ+H+  VK  +  +V V N L+  YSK + + +A+ +F  + + + VS+  MI+
Sbjct: 293 EFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS 352

Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
                   +++  LF E++      +   F  L+  +  K  ++ G+ IH   + T+ +S
Sbjct: 353 I-----SEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLS 407

Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
           E+ V+NSL+ MYAK     ++ ++F  L++   + W ++IS Y Q G  +EAL  F+   
Sbjct: 408 ELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSAL 467

Query: 369 RANISADQATFASILR--ASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
             +   ++ TF S+L   ASAE  S+  G++ HS +++ G  +N    SALLDMYAK GS
Sbjct: 468 MES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGS 526

Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
           + +++  F E P +N V+W A+ISA A++GD +A +  F+DM + G +PDS++ L+V++A
Sbjct: 527 ICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITA 586

Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
           C   G+++ G Q FNSM + + + P  EHY+SMVD+L R+G   EAE+ + Q+P      
Sbjct: 587 CGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLS 646

Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
           +  S++ +CRIH N++ AK+ AD L +ME +  +  YV MSN+YA  G+WE V++++K M
Sbjct: 647 VLQSLLGACRIHGNVDMAKRVADDLIEMEPM-GSGSYVLMSNLYAEKGEWEKVAKIRKGM 705

Query: 607 RERGVRKVTAYSWVELKSK-----VHVFTANDELHPQTNEIRRKIENLMQEMK 654
           RERGVRK   +SWV++        +H F+++D+ HPQ+ EI R  E L  EMK
Sbjct: 706 RERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMK 758



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 267/532 (50%), Gaps = 20/532 (3%)

Query: 49  QKNQFREAFKLFVDMRTDG-GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSI 107
           ++N   EA  LF      G   + D VT A +L  C          Q+HA  I  G+ S 
Sbjct: 55  RRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKLG--CQIHAFAISSGFISH 112

Query: 108 LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
           + + NSL++ YCK    D A  VF+ +   D VS+N +++GF +   +++A+   + M  
Sbjct: 113 VTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR---SDDALNFALRMNF 169

Query: 168 LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
            G      T    L+          G Q+H+ ++K      VFV NAL+ +YS+   +VE
Sbjct: 170 TGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVE 229

Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYK-ESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
           AR++F EM   D VS+N M++ YA       E++ +F E+           F+  +S   
Sbjct: 230 ARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACG 289

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
           +  + ++GRQIH+  +     + VKV N L+  Y+KC   E+AK +F ++   + V WT 
Sbjct: 290 HGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTT 349

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           MIS      + E+A +LF EM R  +  +  TF  ++ A      +  G+ +H   +++ 
Sbjct: 350 MISI-----SEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTS 404

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
           F+S +   ++L+ MYAK  S+ D+++ F+E+  R I+SWN+LIS  AQNG  Q  L++F 
Sbjct: 405 FLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFL 464

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIE-EGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
             +    +P+  +  SVLS+ +    I     Q  +S   K  L       ++++D+  +
Sbjct: 465 SALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAK 523

Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK-MEK 576
            G   E+  + ++ P + +E+ W+++I++   H + E    A   LFK ME+
Sbjct: 524 RGSICESLGVFSETPLK-NEVAWTAIISAHARHGDYE----AVMNLFKDMER 570



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/565 (24%), Positives = 262/565 (46%), Gaps = 63/565 (11%)

Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF--KPSDFTFAAALSAGVGLADIAL 192
           PQ    S N  +    +  L+ EA+ LF +    GF       T A  L A  G  D  L
Sbjct: 39  PQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG--DSKL 96

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+HAF + + F+ +V V N+L+++Y K      A  +F  +   D VS+N +++ +  
Sbjct: 97  GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGF-- 154

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
            ++  ++L     + FT         +T+L+  ++      G Q+H++ +      EV V
Sbjct: 155 -QRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213

Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE-EALNLFIEMCRAN 371
            N+L+ MY++C R  EA+ +F  + +   V W AM+S Y Q+GN   EA+ +F+EM +  
Sbjct: 214 GNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEG 273

Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
           +  D  +F   + A        LG+Q+HS  ++ G+ ++V   + L+  Y+K   ++DA 
Sbjct: 274 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 333

Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
             F+ + +RN+VSW  +IS   ++  +      F +M + G  P+ V+ + ++ A +   
Sbjct: 334 LVFESIIDRNVVSWTTMISISEEDATSL-----FNEMRRDGVYPNDVTFVGLIHAITMKN 388

Query: 492 LIEEG-------------------------LQYFNSMTQKYKLRPKKEH-----YASMVD 521
           L+EEG                            F SM+   K+  +  +     + S++ 
Sbjct: 389 LVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 448

Query: 522 ILCRSGCFDEAEK--LMAQMPFEPDEIMWSSVINSCRIHK--NLEFAKKAADQLFKMEKL 577
              ++G + EA +  L A M   P+E  + SV++S    +  ++   ++    + K+   
Sbjct: 449 GYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLN 508

Query: 578 RDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHP 637
            +     A+ ++YA  G   S+ +            +  +S   LK++V  +TA    H 
Sbjct: 509 TNPIVSSALLDMYAKRG---SICE-----------SLGVFSETPLKNEV-AWTAIISAHA 553

Query: 638 QTNEIRRKIENLMQEMKKEGYKPDT 662
           +  +    + NL ++M++EG KPD+
Sbjct: 554 RHGDY-EAVMNLFKDMEREGVKPDS 577



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 126/237 (53%), Gaps = 5/237 (2%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           +N LI+ Y K  +++ + ++F  +  R  +SW  LI GY+Q   ++EA + F+    +  
Sbjct: 412 SNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALME-- 469

Query: 69  SDPDYVTFATLLS--GCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
           S P+  TF ++LS    +E  +     + H+ I+K G N+  I+ ++L+D Y K   +  
Sbjct: 470 SRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICE 529

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           +  VF E P K+ V++ A+I+  A+ G  E  + LF +M+  G KP   TF A ++A   
Sbjct: 530 SLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 589

Query: 187 LADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
              +  G Q+   +VK + +E +    ++++D+  +   + EA +  G++P   G+S
Sbjct: 590 KGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLS 646



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
           N N + ++ L+  Y K G++  +  +F+    +  V+WT +I  +++   +     LF D
Sbjct: 508 NTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKD 567

Query: 63  MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK 101
           M  + G  PD +TF  +++ C      +   Q+   ++K
Sbjct: 568 MERE-GVKPDSITFLAVITACGRKGMVDTGYQLFNSMVK 605


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/659 (34%), Positives = 339/659 (51%), Gaps = 78/659 (11%)

Query: 165 MQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC 224
           ++H+ F P       A  +      + L R +HA    +    + FVA++LL  Y +   
Sbjct: 11  LRHVSFPPDPHLLPTAFKS---CPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67

Query: 225 VVEARKLFGEMPEVDG--VSYNVMITCYAWNEQYKESLKLFRELQ--------------- 267
              AR LF  MP      V ++ ++  +A     + + +L  E++               
Sbjct: 68  TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127

Query: 268 ---FTRFDRSQFPFSTL-------------------LSVVANKLDLQIGRQIHTQTIVTT 305
                R  R++     L                   LS V +   + +G+Q+H   +   
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAG 187

Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLSH--------------------------- 338
             ++  V  +L+DMY KCG+  E   +F   SH                           
Sbjct: 188 CRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFK 247

Query: 339 --------ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
                   ++ V WT++++  VQ G   EA+  F EM       +  T   +L A A +A
Sbjct: 248 EFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVA 307

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           +L  G+  H F +R GF+ +V+  SAL+DMYAK G +KDA   F  M  RN+VSWNA+I 
Sbjct: 308 ALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIG 367

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
             A  G+A   +  F  M++   +PD V+   +L+AC+  GL EEG  YF  M  +Y + 
Sbjct: 368 GYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVS 427

Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ 570
           P+ EHYA MV +L R+G  DEA  L++ MPFEPD  +W S++ SCR+H N++ A+ AA++
Sbjct: 428 PRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEK 487

Query: 571 LFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFT 630
           LF +E   +A  YV +SNIYA    W+ V++V++ M++ G++K    SW+E+K+KVH+  
Sbjct: 488 LFHLEP-ENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLL 546

Query: 631 ANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFA 690
           A D+ HP    I  KI  L  +M+K G+ P T   LHD +E+ K + L  HSE+LA+A  
Sbjct: 547 AGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALG 606

Query: 691 LINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
           LI+T  G+ + V+KNLR C DCH A+K IS   GREI+VRD++RFHHF  G CSC DFW
Sbjct: 607 LISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 162/377 (42%), Gaps = 49/377 (12%)

Query: 127 ARRVFKEMPQKDSV-----SFNALITGFAKEGLNEEAIKLFVEMQHLGF-KPSDFTFAAA 180
           A R+ +EM +   V     ++N L++G  + G   +A+     M   G  +P     + A
Sbjct: 104 AWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCA 163

Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           LSA   +  +++G+Q+H + VK     +  V  AL+D+Y K     E  ++F E   +D 
Sbjct: 164 LSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDV 223

Query: 241 VSYNVMITCYAWNEQYKESLKL-----------------------------------FRE 265
            S N +I   + N Q  E+L+L                                   FRE
Sbjct: 224 ASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFRE 283

Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
           +Q    + +      +L   AN   L  GR  H   +    + +V V+++LVDMYAKCGR
Sbjct: 284 MQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGR 343

Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
            ++A+ IF  +   + V W AMI  Y   G    A+ +F  M +     D  TF  +L A
Sbjct: 344 VKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAA 403

Query: 386 SAELASLSLG----KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
             +      G    K++H+     G    +   + ++ +  ++G L +A     +MP E 
Sbjct: 404 CTQAGLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEP 460

Query: 441 NIVSWNALISACAQNGD 457
           +   W +L+ +C  +G+
Sbjct: 461 DAYIWGSLLGSCRVHGN 477



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 177/427 (41%), Gaps = 81/427 (18%)

Query: 12  LISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           L+  Y++ G    AR LF+ M    RT V W+ L+  ++ +     A++L  +MR DGG 
Sbjct: 58  LLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGV 117

Query: 70  DPDYVTFATLLSGCSEPDTANELI------------------------------------ 93
           +P+ +T+  L+SG +    A + +                                    
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177

Query: 94  QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE- 152
           Q+H   +K G  +   +  +L+D Y K        RVF E    D  S NALI G ++  
Sbjct: 178 QLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNA 237

Query: 153 ----------------------------------GLNEEAIKLFVEMQHLGFKPSDFTFA 178
                                             G + EA++ F EMQ  G +P+  T  
Sbjct: 238 QVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIP 297

Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
             L A   +A +  GR  H F ++  F+ +V+V++AL+D+Y+K   V +AR +F  M   
Sbjct: 298 CVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSR 357

Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR--- 295
           + VS+N MI  YA   +   ++ +F  +   +       F+ LL+        + GR   
Sbjct: 358 NVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYF 417

Query: 296 -QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQ 353
            ++H +  V+  +        +V +  + G+ +EA ++ +++        W +++ +   
Sbjct: 418 KEMHNEYGVSPRMEHYAC---MVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRV 474

Query: 354 KGNLEEA 360
            GN++ A
Sbjct: 475 HGNVDLA 481



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 5/185 (2%)

Query: 3   NQNTVSTNMLISGYVKSGNLATARELFNSMVDR----TAVSWTILIGGYSQKNQFREAFK 58
           + +  S N LI+G  ++  +  A  LF   VDR      VSWT ++    Q  +  EA +
Sbjct: 220 HMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVE 279

Query: 59  LFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
            F +M+  G ++P+ VT   +L   +           H   ++ G+   + + ++LVD Y
Sbjct: 280 FFREMQAQG-TEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMY 338

Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
            K   +  AR +F  M  ++ VS+NA+I G+A  G    A+ +F  M     KP   TF 
Sbjct: 339 AKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFT 398

Query: 179 AALSA 183
             L+A
Sbjct: 399 CLLAA 403



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMV----DRTAVSWTILIGGYSQKNQFREA 56
           M ++N VS N +I GY   G    A  +F+SM+        V++T L+   +Q     E 
Sbjct: 354 MVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEG 413

Query: 57  FKLFVDMRTDGGSDP---DYVTFATLLSGCSEPDTANELI 93
              F +M  + G  P    Y    TLL    + D A +LI
Sbjct: 414 RHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLI 453


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/655 (33%), Positives = 358/655 (54%), Gaps = 45/655 (6%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           ARR+ + +P++  V+              E+A+  +  M   G  P  +TF   L A   
Sbjct: 8   ARRLLEGIPRRCLVA------------AREDAVAGYARMLARGAMPDAYTFPPLLKAVAR 55

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
            +  A  R VHA VVK     N  VA +L+  Y+       AR L  E      V +N +
Sbjct: 56  GSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNAL 115

Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL-DLQIGRQIHTQTIVTT 305
           I+ +    ++ E+   F ++       +   + ++LS       D+ +G Q+H + + + 
Sbjct: 116 ISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSG 175

Query: 306 AISEVKVANSLVDMYAKC-------------------------------GRFEEAKEIFA 334
            + +++V N+LVDMYA+C                               GR +EA+++F 
Sbjct: 176 VLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFG 235

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +    TV WTAMI  YVQ     EAL +F EM  +N+SAD+ T  S++ A A+L +L +
Sbjct: 236 RMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEM 295

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G+ +  ++ R G   + F G+AL+DMY+K GS++ A+  FK+M  R+  +W A+I   A 
Sbjct: 296 GEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAV 355

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG  +  ++ F  M+     PD V+ + VL+AC+H GL+++G ++F SM + Y + P   
Sbjct: 356 NGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVV 415

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
           HY  ++D+  R+G   EA   + QMP  P+  +W +++ +CR+H N E  +   ++L +M
Sbjct: 416 HYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQM 475

Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDE 634
           +   ++  Y  +SNIYA   +WE V +++  + E+G++K    S +E+   +H F A D+
Sbjct: 476 DP-ENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQ 534

Query: 635 LHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINT 694
            HP + EI  K+E+++ ++   GY PD +    +  EE K + L +HSE+LAIAFAL+++
Sbjct: 535 SHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSS 594

Query: 695 PEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
              + I ++KNLR C DCH AIKLIS++ GRE+ VRD +RFHHF+ GFCSC+D+W
Sbjct: 595 EPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 214/454 (47%), Gaps = 40/454 (8%)

Query: 68  GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
           G+ PD  TF  LL   +   +A  +  VHA ++KFG      +  SLV +Y        A
Sbjct: 38  GAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAA 97

Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA-GVG 186
           R +  E  +   V +NALI+G  +     EA   FV+M   G  P+  T+ + LSA G G
Sbjct: 98  RALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKG 157

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDC---------------------- 224
             D+ LG QVH  VV +  + ++ V NAL+D+Y+  +C                      
Sbjct: 158 TGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYA--ECADMESAWKLFDGMQVRSVVSWT 215

Query: 225 -----------VVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR 273
                      V EAR LFG MPE D VS+  MI  Y    +++E+L++FRE+Q +    
Sbjct: 216 SLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSA 275

Query: 274 SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIF 333
            +F   ++++  A    L++G  +           +  V N+L+DMY+KCG  E A ++F
Sbjct: 276 DEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVF 335

Query: 334 ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLS 393
            ++ H     WTA+I      G  EEA+ +F  M   + + D+ TF  +L A      + 
Sbjct: 336 KDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVD 395

Query: 394 LGKQLH-SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISA 451
            G++   S         NV     ++D++ ++G + +A+    +MP   N   W  L++A
Sbjct: 396 KGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAA 455

Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
           C  +G+++      E ++Q    P++ ++ ++LS
Sbjct: 456 CRVHGNSEIGELVTERLLQ--MDPENSTVYTLLS 487



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 164/359 (45%), Gaps = 39/359 (10%)

Query: 36  TAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELI-- 93
           T V W  LI G+++  +F EA   FVDM    G+ P  VT+ ++LS C +  T + L+  
Sbjct: 108 TPVVWNALISGHNRCRRFGEACCSFVDM-ARAGAAPTPVTYVSVLSACGK-GTGDVLLGM 165

Query: 94  QVHADIIKFGYNSILIICNSLVDSYC-------------------------------KIR 122
           QVH  ++  G    L + N+LVD Y                                ++ 
Sbjct: 166 QVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLG 225

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            +D AR +F  MP++D+VS+ A+I G+ +     EA+++F EMQ       +FT  + ++
Sbjct: 226 RVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVIT 285

Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
           A   L  + +G  V  ++ +     + FV NAL+D+YSK   +  A  +F +M   D  +
Sbjct: 286 ACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFT 345

Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
           +  +I   A N   +E++++F  +        +  F  +L+   +   +  GR+      
Sbjct: 346 WTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMR 405

Query: 303 VTTAISEVKVA-NSLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMISAYVQKGNLE 358
            T  I+   V    ++D++ + G+  EA +    +     ST+ W  +++A    GN E
Sbjct: 406 ETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTI-WGTLLAACRVHGNSE 463



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 37/333 (11%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           M  ++ VS   L+SG  + G +  AR+LF  M +R  VSWT +I GY Q  +FREA ++F
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMF 265

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
            +M+    S  D  T  ++++ C++         V   + + G      + N+L+D Y K
Sbjct: 266 REMQCSNVS-ADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 324

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              ++ A  VFK+M  +D  ++ A+I G A  G  EEAI++F  M  +   P + TF   
Sbjct: 325 CGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGV 384

Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
           L+A      +  GR+    + +T N   NV     ++DL+ +   + EA     +MP   
Sbjct: 385 LTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMP--- 441

Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
            ++ N  I                              + TLL+      + +IG ++ T
Sbjct: 442 -MTPNSTI------------------------------WGTLLAACRVHGNSEIG-ELVT 469

Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI 332
           + ++        V   L ++YAKC R+E+ + +
Sbjct: 470 ERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRL 502


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/651 (34%), Positives = 365/651 (56%), Gaps = 13/651 (1%)

Query: 108  LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
            LI  N L+D YCK R   +A +VF  MP+++ VS+ AL++G    G    ++ LF EM  
Sbjct: 404  LITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGR 463

Query: 168  LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
             G  P++FTF+  L A   L  +  G Q+H F +K  F   V V N+L+D+YSK   + E
Sbjct: 464  QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 523

Query: 228  ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVV 285
            A K+F  M     +S+N MI  Y        +L  F  +Q  +      +F  ++LL   
Sbjct: 524  AEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKAC 583

Query: 286  ANKLDLQIGRQIHTQTIVTT--AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
            ++   +  G+QIH   + +     S   +  SLVD+Y KCG    A++ F  +   + + 
Sbjct: 584  SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMIS 643

Query: 344  WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
            W+++I  Y Q+G+  EA+ LF  +   +   D    +SI+   A+ A L  GKQ+ + V+
Sbjct: 644  WSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVV 703

Query: 404  R--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            +  SG  ++V   ++L+DMY K G + +A + F EM  ++++SW  +I+   ++G  +  
Sbjct: 704  KLPSGLETSV--SNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKA 761

Query: 462  LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
            +  F  M++   +PD V  L+VLSACSH G+I+EG + F+ + +   ++P+ EHYA +VD
Sbjct: 762  VSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVD 821

Query: 522  ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
            +L R+G   EA+ L+  MP +P+  +W ++++ CR+H ++E  K+    L +++  ++ A
Sbjct: 822  LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDG-KNPA 880

Query: 582  PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
             YV MSN+Y  AG W      ++    +G++K    SWVE++ +VH F + ++ HP T  
Sbjct: 881  NYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLV 940

Query: 642  IRRKIENLMQEMKKE-GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN---TPEG 697
            I+  ++ + + +++E GY       LHD D+E K E+L+ HSE+LAI  AL       +G
Sbjct: 941  IQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKG 1000

Query: 698  SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
              I V KNLR C DCH  IK +SKIT     VRD+ RFH F+DG CSC D+
Sbjct: 1001 KTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 241/461 (52%), Gaps = 7/461 (1%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
           N +++N LI  Y K      A ++F+SM +R  VSWT L+ G+        +  LF +M 
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462

Query: 65  TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
             G   P+  TF+T L  C   +   + +Q+H   +K G+  ++ + NSLVD Y K   +
Sbjct: 463 RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 521

Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAAALS 182
           + A +VF+ M  +  +S+NA+I G+   G    A+  F  MQ    K  P +FT  + L 
Sbjct: 522 NEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLK 581

Query: 183 AGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
           A      I  G+Q+H F+V++ F    +  +  +L+DLY K   +  ARK F ++ E   
Sbjct: 582 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTM 641

Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
           +S++ +I  YA    + E++ LF+ LQ        F  S+++ V A+   LQ G+Q+   
Sbjct: 642 ISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQAL 701

Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
            +   +  E  V+NSLVDMY KCG  +EA++ FA +     + WT MI+ Y + G  ++A
Sbjct: 702 VVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKA 761

Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
           +++F +M R NI  D+  + ++L A +    +  G++L S ++ + G    V   + ++D
Sbjct: 762 VSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVD 821

Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           +  ++G LK+A      MP + N+  W  L+S C  +GD +
Sbjct: 822 LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIE 862



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 125/236 (52%), Gaps = 3/236 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P+  T+ T  L+  YVK GNL +AR+ F+ + ++T +SW+ LI GY+Q+  F EA  LF 
Sbjct: 607 PSSATI-TGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFK 665

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
            ++ +  S  D    ++++   ++     +  Q+ A ++K        + NSLVD Y K 
Sbjct: 666 RLQ-ELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKC 724

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
             +D A + F EM  KD +S+  +ITG+ K GL ++A+ +F +M     +P +  + A L
Sbjct: 725 GLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVL 784

Query: 182 SAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLFGEMP 236
           SA      I  G ++ + +++T  ++  V     ++DL  +   + EA+ L   MP
Sbjct: 785 SACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMP 840



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKS 464
           SG   N+ + + L+DMY K      A + F  MPERN+VSW AL+S    NGD   +L  
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 465 FEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILC 524
           F +M + G  P+  +  + L AC     +E+GLQ  +    K       E   S+VD+  
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYS 516

Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           + G  +EAEK+   M      I W+++I
Sbjct: 517 KCGRINEAEKVFRWM-VGRSLISWNAMI 543


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/651 (34%), Positives = 369/651 (56%), Gaps = 13/651 (1%)

Query: 108  LIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH 167
            LI  N L+D YCK R   +A +VF  MP+++ VS++AL++G    G  + ++ LF EM  
Sbjct: 412  LITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 471

Query: 168  LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVE 227
             G  P++FTF+  L A   L  +  G Q+H F +K  F   V V N+L+D+YSK   + E
Sbjct: 472  QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 531

Query: 228  ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDR--SQFPFSTLLSVV 285
            A K+F  + +   +S+N MI  +       ++L  F  +Q         +F  ++LL   
Sbjct: 532  AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 591

Query: 286  ANKLDLQIGRQIHTQTIVTT--AISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
            ++   +  G+QIH   + +     S   +  SLVD+Y KCG    A++ F  +   + + 
Sbjct: 592  SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 651

Query: 344  WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
            W+++I  Y Q+G   EA+ LF  +   N   D    +SI+   A+ A L  GKQ+ +  +
Sbjct: 652  WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 711

Query: 404  R--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQAT 461
            +  SG  ++V +  +++DMY K G + +A + F EM  ++++SW  +I+   ++G  + +
Sbjct: 712  KLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 462  LKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVD 521
            ++ F +M++   +PD V  L+VLSACSH G+I+EG + F+ + + + ++P+ EHYA +VD
Sbjct: 770  VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 522  ILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
            +L R+G   EA+ L+  MP +P+  +W ++++ CR+H ++E  K+    L +++  ++ A
Sbjct: 830  LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA-KNPA 888

Query: 582  PYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNE 641
             YV MSN+Y  AG W      ++    +G++K    SWVE++ +VH F + ++ HP T  
Sbjct: 889  NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPV 948

Query: 642  IRRKIENLMQEMKKE-GYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALIN---TPEG 697
            I+  ++   + +++E GY       LHD D+E K E+L+ HSE+LAI  AL       +G
Sbjct: 949  IQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKG 1008

Query: 698  SPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
              I V KNLR C DCH  IK +SKIT     VRD+ RFH F+DG CSC D+
Sbjct: 1009 KTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 243/464 (52%), Gaps = 7/464 (1%)

Query: 2   PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
           P  N +++N LI  Y K      A ++F+SM +R  VSW+ L+ G+      + +  LF 
Sbjct: 408 PWLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS 467

Query: 62  DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
           +M   G   P+  TF+T L  C   +   + +Q+H   +K G+  ++ + NSLVD Y K 
Sbjct: 468 EMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 526

Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAA 179
             ++ A +VF+ +  +  +S+NA+I GF   G   +A+  F  MQ    K  P +FT  +
Sbjct: 527 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 586

Query: 180 ALSAGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
            L A      I  G+Q+H F+V++ F    +  +  +L+DLY K   +  ARK F ++ E
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 646

Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
              +S++ +I  YA   ++ E++ LF+ LQ        F  S+++ V A+   L+ G+Q+
Sbjct: 647 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 706

Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
               +   +  E  V NS+VDMY KCG  +EA++ FA +     + WT +I+ Y + G  
Sbjct: 707 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 766

Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSA 416
           ++++ +F EM R NI  D+  + ++L A +    +  G++L S ++ + G    V   + 
Sbjct: 767 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 826

Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQ 459
           ++D+  ++G LK+A      MP + N+  W  L+S C  +GD +
Sbjct: 827 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 870



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 5/167 (2%)

Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
           N+ + + L+DMY K      A + F  MPERN+VSW+AL+S    NGD + +L  F +M 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
           + G  P+  +  + L AC     +E+GLQ  +    K       E   S+VD+  + G  
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
           +EAEK+  ++  +   I W+++I    +H    +  KA D    M++
Sbjct: 530 NEAEKVFRRI-VDRSLISWNAMIAGF-VHAG--YGSKALDTFGMMQE 572


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/540 (37%), Positives = 316/540 (58%), Gaps = 33/540 (6%)

Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
           S+N +I   A +    E+L+ F  ++      ++  F   +   +  LDL  GRQ H Q 
Sbjct: 43  SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102

Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
           ++     ++ V+++LVDMY+KCG   +A+ +F  +SH + V WT+MI+ YVQ  +   AL
Sbjct: 103 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 162

Query: 362 NLFIEMCR--------------------------------ANISADQATFASILRASAEL 389
            +F  M                                    I+ +  T +++L A A  
Sbjct: 163 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 222

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
            S  LGK +H  VI+ G  SNVF G++++DMY K G ++ A + F  M E+N+ SW+A++
Sbjct: 223 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMV 282

Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
           +    +G A+  L+ F +M  +G +P+ ++ +SVL+ACSH GL+EEG  +F +M+ ++ +
Sbjct: 283 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 342

Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
            P  EHY  MVD+L R+G   EA  L+  M   PD ++W +++ +CR+HKN++  + +A 
Sbjct: 343 EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISAR 402

Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
           +LF+++  ++   YV +SNIYA AG+WE V +++  M+  G+ K   +S V++K +VHVF
Sbjct: 403 KLFELDP-KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVF 461

Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
              D  HPQ  +I   +E L  ++++ GY PD +  LHD   E K   L+ HSE+LA+AF
Sbjct: 462 LVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAF 521

Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            ++NT  G+ I ++KNLR C DCH AIK ISKI  REI VRDS RFHHF+DG CSC D+W
Sbjct: 522 GIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 172/359 (47%), Gaps = 42/359 (11%)

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
           K + + +  S+N++I   A+ G + EA++ F  M+ L  KP+  TF  A+ +   L D+ 
Sbjct: 34  KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 93

Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGE----------------- 234
            GRQ H   +   F  ++FV++AL+D+YSK   + +AR LF E                 
Sbjct: 94  SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 235 --------------MPEVDGVSYNVMITCYAWNEQYKESLKLF-RELQFTRFDRSQFPFS 279
                         M E D +S+N +I  YA N    ES+++F R ++    + +    S
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213

Query: 280 TLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI 339
            +L   A+    ++G+ IH Q I     S V V  S++DMY KCG+ E A++ F  +   
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273

Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL- 398
           +   W+AM++ Y   G+ +EAL +F EM  A +  +  TF S+L A +    L  G    
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 333

Query: 399 ----HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISAC 452
               H F +  G    V     ++D+  ++G LK+A    K M  R + V W AL+ AC
Sbjct: 334 KAMSHEFDVEPG----VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 388



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 103/183 (56%)

Query: 1   MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + ++N VS   +I+GYV++ +   A  +F+ M +R  +SW  +I  Y+Q     E+ ++F
Sbjct: 137 ISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIF 196

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
             M  DG  + + VT + +L  C+   +      +H  +IK G  S + +  S++D YCK
Sbjct: 197 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 256

Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
              +++AR+ F  M +K+  S++A++ G+   G  +EA+++F EM   G KP+  TF + 
Sbjct: 257 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 316

Query: 181 LSA 183
           L+A
Sbjct: 317 LAA 319



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 165/381 (43%), Gaps = 45/381 (11%)

Query: 16  YVKSGNLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYV 74
           Y  + NL T   LFN  VD+T V SW  +I   ++     EA + F  MR      P+  
Sbjct: 22  YSNNPNLTT---LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRS 77

Query: 75  TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
           TF   +  CS     +   Q H   + FG+   L + ++LVD Y K   L  AR +F E+
Sbjct: 78  TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 137

Query: 135 PQKDSVSFNALITG-------------------------------FAKEGLNEEAIKLFV 163
             ++ VS+ ++ITG                               +A+ G++ E++++F 
Sbjct: 138 SHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 197

Query: 164 EMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
            M   G    +  T +A L A        LG+ +H  V+K     NVFV  +++D+Y K 
Sbjct: 198 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 257

Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
             V  ARK F  M E +  S++ M+  Y  +   KE+L++F E+       +   F ++L
Sbjct: 258 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 317

Query: 283 SVVANKLDLQIG----RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS- 337
           +  ++   L+ G    + +  +  V   +        +VD+  + G  +EA ++   +  
Sbjct: 318 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY---GCMVDLLGRAGYLKEAFDLIKGMKL 374

Query: 338 HISTVPWTAMISAYVQKGNLE 358
               V W A++ A     N++
Sbjct: 375 RPDFVVWGALLGACRMHKNVD 395


>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Brachypodium distachyon]
          Length = 598

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/522 (39%), Positives = 307/522 (58%), Gaps = 7/522 (1%)

Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
           L G +P  D  S N ++  +A + + + +L L R       D   +P   LL   A  L 
Sbjct: 81  LSGLLPSPDPFSLNTVLRIFASSARPRVALALHRR-HLAPPDTHTYP--PLLQACARLLA 137

Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMI 348
           L+ G  +H +      +S V V NSLV +Y  CG FE A  +F  +     + V W +++
Sbjct: 138 LRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVL 197

Query: 349 SAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM 408
           + +   G   E L +F EM     + D  T  S+L A AE+  L+LG+++H FV + G +
Sbjct: 198 NGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLV 257

Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
            N  +G+AL+D+YAK G + DA + F EM   R +VSW +LI   A NG     L+ F  
Sbjct: 258 GNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSM 317

Query: 468 MVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSG 527
           M +    P  ++++ VL ACSHCGL+++G +YF+ M  +Y + P+ EH   MVD+L R+G
Sbjct: 318 MEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAG 377

Query: 528 CFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMS 587
             +EA   +  MP EP+ ++W +++ +C +HK LE  + A  +L +++    +  YV +S
Sbjct: 378 RVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDP-GHSGDYVLLS 436

Query: 588 NIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIE 647
           N+YA  G+W  V  ++K M   GVRK   +S VEL++ V+ F   D  HP+T++I   + 
Sbjct: 437 NLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEMLG 496

Query: 648 NLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLR 707
           ++ + ++++GY P TS  L D ++E K  +L YHSERLAIAFAL+ +  G+PI ++KNLR
Sbjct: 497 DIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLR 556

Query: 708 ACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
            C DCH AIKLISK+  REI VRD SRFHHFK G CSC+D+W
Sbjct: 557 VCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 17/301 (5%)

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
           + PD  T+  LL  C+          +HA+  K G  S++ + NSLV  Y      + A 
Sbjct: 118 APPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAH 177

Query: 129 RVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
           RVF E+P  +++ VS+N+++ GFA  G   E + +F EM  + F P  FT  + L+A   
Sbjct: 178 RVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAE 237

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VSYNV 245
           +  +ALGR+VH FV K   V N    NAL+DLY+K   V +ARK+FGEM      VS+  
Sbjct: 238 IGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTS 297

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
           +I   A N    ++L+LF  ++  +   ++     +L   ++   +  G +   Q     
Sbjct: 298 LIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEY 357

Query: 306 AIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-------WTAMISAYVQKGNL 357
            I+  ++    +VD+  + GR EEA       ++I+T+P       W  ++ A      L
Sbjct: 358 GITPRIEHLGCMVDLLGRAGRVEEAH------NYITTMPLEPNAVVWRTLLGACAMHKKL 411

Query: 358 E 358
           E
Sbjct: 412 E 412



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 16/201 (7%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSM-VDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           N  + N LI  Y K G +  AR++F  M V RT VSWT LI G +      +A +LF  M
Sbjct: 259 NAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMM 318

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSYCKI 121
             +    P  +T   +L  CS     ++  + + D +K  +G    +     +VD   + 
Sbjct: 319 ERE-KLMPTEITMVGVLYACSHCGLVDDGFR-YFDQMKAEYGITPRIEHLGCMVDLLGRA 376

Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFA---KEGLNEEAIKLFVEMQ--HLGFKPSDF 175
             ++ A      MP + ++V +  L+   A   K  + E A    VE+   H G    D+
Sbjct: 377 GRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSG----DY 432

Query: 176 TFAAALSAGVG-LADIALGRQ 195
              + L AGVG  AD+ + R+
Sbjct: 433 VLLSNLYAGVGRWADVHVLRK 453


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/654 (35%), Positives = 364/654 (55%), Gaps = 7/654 (1%)

Query: 12   LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
            L+S Y K   +  A ++F ++ +R  V W  +I GY+   +  +  +LF+DM++ G +  
Sbjct: 368  LVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427

Query: 72   DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
            D+ TF +LLS C+         Q H+ IIK      L + N+LVD Y K   L+ AR++F
Sbjct: 428  DF-TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIF 486

Query: 132  KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
            + M  +D+VS+N +I G+ ++    EA  LF+ M   G        A+ L A   +  + 
Sbjct: 487  EHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLY 546

Query: 192  LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
             G+QVH   VK      +   ++L+D+YSK   + +ARK+F  MPE   VS N +I  Y+
Sbjct: 547  QGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYS 606

Query: 252  WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
             N   +E++ LF+E+     + S+  F+T++        L +G Q H Q I     SE +
Sbjct: 607  QN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGE 665

Query: 312  -VANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCR 369
             +  SL+ +Y    R  EA  +F+ LS   S V WT M+S + Q G  EEAL  + EM  
Sbjct: 666  YLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725

Query: 370  ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
                 DQATF ++LR  + L+SL  G+ +HS +       +  + + L+DMYAK G +K 
Sbjct: 726  DGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKS 785

Query: 430  AIQTFKEMPER-NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
            + Q F EM  R N+VSWN+LI+  A+NG A+  LK F+ M QS   PD ++ L VL+ACS
Sbjct: 786  SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845

Query: 489  HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
            H G + +G + F  M  +Y +  + +H A MVD+L R G   EA+  +     +PD  +W
Sbjct: 846  HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905

Query: 549  SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            SS++ +CRIH +    + AA++L ++E  ++++ YV +SNIYA  G+WE  + ++KAMR+
Sbjct: 906  SSLLGACRIHGDDMRGEIAAERLIELEP-QNSSAYVLLSNIYASQGRWEEANALRKAMRD 964

Query: 609  RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG-YKPD 661
            RGV+KV  YSW+++  + H+F A D+ H    +I   +E+L   MK +    PD
Sbjct: 965  RGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLMKDDAVVNPD 1018



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 192/654 (29%), Positives = 313/654 (47%), Gaps = 76/654 (11%)

Query: 4   QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +N+     L+  Y K   L  A+ +F+ +VD   V WT L  GY +     EA  +F  M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 64  RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
           R +G   PD++ F T+                                   +++Y  +  
Sbjct: 253 RGEG-HRPDHLAFVTV-----------------------------------INTYISLGK 276

Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           L  AR +F EMP  D V++N +I+G  K G    AI+ F+ M+    K +  T  + LSA
Sbjct: 277 LKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
              +A++ LG  VHA  +K     N++V ++L+ +YSK + +  A K+F  + E + V +
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLW 396

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N MI  YA N +  + ++LF +++ + ++   F F++LLS  A   DL++G Q H+  I 
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK 456

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
                 + V N+LVDMYAKCG  E+A++IF ++     V W  +I  YVQ  N  EA +L
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516

Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
           F+ M    I +D A  AS L+A   +  L  GKQ+H   ++ G    + +GS+L+DMY+K
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSK 576

Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
            G ++DA + F  MPE ++VS NALI+  +QN   +A +  F++M+  G  P  ++  ++
Sbjct: 577 CGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVVL-FQEMLTKGVNPSEITFATI 635

Query: 484 LSACS-----------HCGLIEEGLQ-------------YFNS--MTQKYKL-----RPK 512
           + AC            H  +I+ G               Y NS  M +   L      PK
Sbjct: 636 VEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPK 695

Query: 513 K-EHYASMVDILCRSGCFDEAEKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAA 568
               +  M+    ++G ++EA K   +M  +   PD+  + +V+  C +  +L   +   
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIH 755

Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVEL 622
             +F +    D      + ++YA  G  +S SQV   MR    R+    SW  L
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMR----RRSNVVSWNSL 805



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 226/460 (49%), Gaps = 38/460 (8%)

Query: 95  VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGL 154
           VH+  +  G +S   + N++VD Y K   +  A + F  + +KD  ++N++++ ++  G 
Sbjct: 82  VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQ 140

Query: 155 NEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANA 214
             + ++ FV +      P+ FTF+  LS      ++  GRQ+H  ++K     N +   A
Sbjct: 141 PGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGA 200

Query: 215 LLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRS 274
           L+D+Y+K D + +A+++F  + + + V +  + + Y      +E++ +F  ++       
Sbjct: 201 LVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPD 260

Query: 275 QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFA 334
              F T                                   +++ Y   G+ ++A+ +F 
Sbjct: 261 HLAFVT-----------------------------------VINTYISLGKLKDARLLFG 285

Query: 335 NLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL 394
            +     V W  MIS + ++G    A+  F+ M ++++ + ++T  S+L A   +A+L L
Sbjct: 286 EMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345

Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQ 454
           G  +H+  I+ G  SN++ GS+L+ MY+K   ++ A + F+ + ERN V WNA+I   A 
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAH 405

Query: 455 NGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
           NG++   ++ F DM  SGY  D  +  S+LS C+    +E G Q F+S+  K KL     
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKLTKNLF 464

Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
              ++VD+  + G  ++A ++   M  + D + W+++I  
Sbjct: 465 VGNALVDMYAKCGALEDARQIFEHMC-DRDNVSWNTIIGG 503



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 203/454 (44%), Gaps = 53/454 (11%)

Query: 228 ARKLFGE-MPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
            R+++G  +P  D +   ++  C        E  KLF+  +   FD  + P    L+   
Sbjct: 30  GRRVYGHVLPNHDQIHQGLLEICL-------EQCKLFKSRKV--FD--EMPHRLALA--- 75

Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
               L+IG+ +H+++++    SE ++ N++VD+YAKC +   A++ F +L    T  W +
Sbjct: 76  ----LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVT-AWNS 130

Query: 347 MISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
           M+S Y   G   + L  F+ +    I  ++ TF+ +L  SA   ++  G+Q+H  +I+ G
Sbjct: 131 MLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMG 190

Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
              N + G AL+DMYAK   L DA + F  + + N V W  L S   + G  +  +  FE
Sbjct: 191 LERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFE 250

Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
            M   G++PD ++ ++V++     G +++    F  M       P    +  M+    + 
Sbjct: 251 RMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKR 305

Query: 527 GCFDEAEKLMAQM---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
           GC   A +    M     +       SV+++  I  NL+       +  K+    +    
Sbjct: 306 GCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365

Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
            ++ ++Y+   + E+ ++V +A+ ER          V   + +  +  N E H       
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEERND--------VLWNAMIRGYAHNGESH------- 410

Query: 644 RKIENLMQEMKKEGYKPD--------TSCAL-HD 668
            K+  L  +MK  GY  D        ++CA+ HD
Sbjct: 411 -KVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHD 443



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 220/539 (40%), Gaps = 98/539 (18%)

Query: 112 NSLVDSYCKIRCL----DLARRVFKE-MPQKDSVSFNALITGFAKEGLNE---EAIKLFV 163
           +S+ DS+  +R L    +L RRV+   +P  D +           +GL E   E  KLF 
Sbjct: 11  SSMFDSFSLVRRLSSSTELGRRVYGHVLPNHDQI----------HQGLLEICLEQCKLFK 60

Query: 164 EMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
             +     P     A           + +G+ VH+  +         + NA++DLY+K  
Sbjct: 61  SRKVFDEMPHRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA 109

Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
            V  A K F  + E D  ++N M++ Y+   Q  + L+ F  L       ++F FS +LS
Sbjct: 110 QVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLS 168

Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP 343
             A + +++ GRQIH   I            +LVDMYAKC R  +A+ +F  +   +TV 
Sbjct: 169 TSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVC 228

Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVI 403
           WT + S YV+ G  EEA+ +F  M       D   F ++                     
Sbjct: 229 WTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV--------------------- 267

Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLK 463
                         ++ Y   G LKDA   F EMP  ++V+WN +IS   + G     ++
Sbjct: 268 --------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313

Query: 464 SFEDMVQSGYQPDSVSLLSVLSACS-----------HCGLIEEGLQ----YFNSMTQKYK 508
            F +M +S  +    +L SVLSA             H   I+ GL       +S+   Y 
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373

Query: 509 LRPKKEHYA---------------SMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSS 550
              K E  A               +M+     +G   +  +L   M    +  D+  ++S
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433

Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
           ++++C +  +LE   +    + K +  ++     A+ ++YA  G  E   Q+ + M +R
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/562 (37%), Positives = 328/562 (58%), Gaps = 9/562 (1%)

Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
           G Q+HA ++K        +++ L++ YSK      + ++F + P     +++ +I+ +A 
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 253 NEQYKESLKLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
           N+    SL  FR +  Q    D   FP +T    + + L   + + +H   + T    ++
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSL--PVAKMLHCFALKTAYHLDI 156

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC-- 368
            V +S++DMYAKCG    A  +F  + + + V W+ +I  YVQ G  +E+L LF      
Sbjct: 157 FVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVE 216

Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             N   +  T +S+LR       L +G+ +H    ++ F S+ F  S+L+ +Y+K G ++
Sbjct: 217 EENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVE 276

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSAC 487
           +A   F+E+  RN+  WNA++ ACAQ+     T + F+ M    G + + ++ L VL AC
Sbjct: 277 EAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYAC 336

Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
           SH GL+E+G  YF  M + Y + P  +HY++MVD+L R+G  ++A KL+ +MP EP E +
Sbjct: 337 SHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESV 395

Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
           W +++  CR+H N + A   AD++ ++  +  +  +V +SN YA AG+WE  ++ +K MR
Sbjct: 396 WGALLTGCRLHGNTKLASYVADRVSELGSV-SSGLHVMLSNAYAAAGRWEEAAKARKMMR 454

Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
           +RG++K T  SWVE  +++H F A D  H ++ EI  K++ L +EM K GY  DTS  L 
Sbjct: 455 DRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLK 514

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
           + D E K  S++YHSERLAIAF  I  P G PI VMKNLR C DCH AIK ISK TGR I
Sbjct: 515 EVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVI 574

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD++RFH F+DG C+C D+W
Sbjct: 575 IVRDNNRFHRFEDGKCTCGDYW 596



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 202/401 (50%), Gaps = 14/401 (3%)

Query: 93  IQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           +Q+HA IIK G  +I ++ + L++ Y K      + ++F + P K + +++++I+ FA+ 
Sbjct: 40  LQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQN 99

Query: 153 GLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVA 212
            L   ++  F  M   G  P D  F +A  +   L+ + + + +H F +KT +  ++FV 
Sbjct: 100 DLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVG 159

Query: 213 NALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
           ++++D+Y+K   +  A  +F EMP  + VS++ +I  Y    +  ESL+LF+       +
Sbjct: 160 SSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEEN 219

Query: 273 R--SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
              + F  S++L V      LQ+GR IH  +  T+  S   VA+SL+ +Y+KCG  EEA 
Sbjct: 220 EGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAY 279

Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM-CRANISADQATFASILRASAEL 389
           ++F  ++  +   W AM+ A  Q  + ++   LF +M     + A+  TF  +L A +  
Sbjct: 280 DVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHA 339

Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNAL 448
             +  GK     +   G        S ++D+  ++G L DA++  +EMP     S W AL
Sbjct: 340 GLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGAL 399

Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
           ++ C  +G+ +           + Y  D VS L  +S+  H
Sbjct: 400 LTGCRLHGNTKL----------ASYVADRVSELGSVSSGLH 430



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 203/448 (45%), Gaps = 50/448 (11%)

Query: 9   TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
           ++ LI+ Y K+    ++ ++F+    ++A +W+ +I  ++Q +    +   F  M   G 
Sbjct: 58  SHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQG- 116

Query: 69  SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
             PD   F +    C    +      +H   +K  Y+  + + +S++D Y K   +  A 
Sbjct: 117 VPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAH 176

Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF----VEMQHLGFKPSDFTFAAALSAG 184
            VF EMP ++ VS++ LI G+ + G ++E+++LF    VE ++ G   +DFT ++ L   
Sbjct: 177 NVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVC 234

Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
            G   + +GR +H    KT+F  + FVA++L+ LYSK   V EA  +F E+   +   +N
Sbjct: 235 GGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWN 294

Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQF-PFSTLLSVVANKLDLQIGRQIHTQTIV 303
            M+   A +    ++ +LF +++     ++ F  F  +L   ++   ++ G+        
Sbjct: 295 AMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKD 354

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEALN 362
                  +  +++VD+  + G+  +A ++   +    T   W A+++     GN +    
Sbjct: 355 YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTK---- 410

Query: 363 LFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
                  A+  AD+ +         EL S+S G  LH                 L + YA
Sbjct: 411 ------LASYVADRVS---------ELGSVSSG--LHVM---------------LSNAYA 438

Query: 423 KSGSLKDAIQTFKEMPERNI-----VSW 445
            +G  ++A +  K M +R I     +SW
Sbjct: 439 AAGRWEEAAKARKMMRDRGIKKETGLSW 466



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)

Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALIS 450
           SL  G QLH+ +I+ G  +       L++ Y+K+     ++Q F + P ++  +W+++IS
Sbjct: 35  SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94

Query: 451 ACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEE----GLQYFNSMTQK 506
           + AQN     +L  F  M++ G  PD        SA   CG++       + +  ++   
Sbjct: 95  SFAQNDLPLLSLNYFRLMLRQGVPPDDHIF---PSATKSCGILSSLPVAKMLHCFALKTA 151

Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
           Y L       +S++D+  + G    A  +  +MP+  + + WS +I
Sbjct: 152 YHLDIFVG--SSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGLI 194


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/627 (35%), Positives = 343/627 (54%), Gaps = 51/627 (8%)

Query: 127 ARRVFKEMPQKDSVSFNALITGFAK---EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
           A   F     K + ++N L+ G+AK    G   +A +LF  + H    P   ++   LS 
Sbjct: 26  AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPH----PDAVSYNTLLSC 81

Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
                DI    +V +    T  V +V   N ++   SK+  + EA  +F  MP  + VS+
Sbjct: 82  HFACGDIDGAWRVFS----TMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSW 137

Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
           N M+   A +     +  LFR                                  T  I+
Sbjct: 138 NAMVAARASSGDMGAAENLFRNAPEK-----------------------------TDAIL 168

Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
            TA         +V  Y   G  ++A E F  +   + V W A+++ YV+     +AL +
Sbjct: 169 WTA---------MVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRV 219

Query: 364 FIEMCR-ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
           F  M   A +  + +T +S+L   + L++L  G+Q+H + ++     ++  G++LL MY 
Sbjct: 220 FKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYC 279

Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
           K G L DA + F EM  ++IV+WNA+IS  AQ+G  +  +K FE M   G  PD ++LL+
Sbjct: 280 KCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLA 339

Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
           VL+AC H GL + G+Q F +M + Y + P+ +HY+ MVD+LCR+G  + A  ++  MPFE
Sbjct: 340 VLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFE 399

Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
           P    + +++ +CR++KNLEFA+ AA +L + +  ++A  YV ++NIYAVA +W+ VS+V
Sbjct: 400 PHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDP-QNAGAYVQLANIYAVANRWDDVSRV 458

Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
           ++ M++  V K   YSW+E+K   H F +ND LHPQ + I  K++ L + MK  GY PD 
Sbjct: 459 RRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDL 518

Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
             ALHD +E +K + L  HSE+LAIAF LI+T  G  + + KNLR C DCH A KLISKI
Sbjct: 519 DFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKI 578

Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
             REI +RD++RFHHF+ G CSC D+W
Sbjct: 579 EDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 186/440 (42%), Gaps = 57/440 (12%)

Query: 21  NLATARELFNSMVDRTAVSWTILIGGY---SQKNQFREAFKLFVDMRTDGGSDPDYVTFA 77
           +LA A E F S   +T  ++  L+ GY   S   +  +A +LF     D    PD V++ 
Sbjct: 22  DLAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLF-----DSIPHPDAVSYN 76

Query: 78  TLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL--ARRVFKEMP 135
           TLLS                                     C   C D+  A RVF  MP
Sbjct: 77  TLLS-------------------------------------CHFACGDIDGAWRVFSTMP 99

Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
            +D  S+N +++G +K G  EEA  +F  M        +   AA  S+G   A   L R 
Sbjct: 100 VRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRN 159

Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
                 KT+ +    +  A++  Y     V +A + F  MP  + VS+N ++  Y  N +
Sbjct: 160 APE---KTDAI----LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSR 212

Query: 256 YKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
             ++L++F+ + +      +    S++L   +N   L  GRQ+H   +       + V  
Sbjct: 213 AGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGT 272

Query: 315 SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISA 374
           SL+ MY KCG  ++A ++F  +     V W AMIS Y Q G   +A+ LF +M    +  
Sbjct: 273 SLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVP 332

Query: 375 DQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQT 433
           D  T  ++L A         G Q    +  +      V   S ++D+  ++G L+ A+  
Sbjct: 333 DWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNM 392

Query: 434 FKEMP-ERNIVSWNALISAC 452
              MP E +  ++  L++AC
Sbjct: 393 IHSMPFEPHPSAYGTLLTAC 412



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 14/263 (5%)

Query: 12  LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
           ++SGY+ +GN+  A E F +M  R  VSW  ++ GY + ++  +A ++F  M  D    P
Sbjct: 172 MVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQP 231

Query: 72  DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
           +  T +++L GCS         QVH   +K      + +  SL+  YCK   LD A ++F
Sbjct: 232 NPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLF 291

Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV--GLAD 189
            EM  KD V++NA+I+G+A+ G   +AIKLF +M+  G  P   T  A L+A +  GL D
Sbjct: 292 DEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCD 351

Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMIT 248
             + +         N    V   + ++DL  +   +  A  +   MP E    +Y  ++T
Sbjct: 352 FGI-QCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLT 410

Query: 249 CYAWNEQYKESLKLFRELQFTRF 271
                     + ++++ L+F  F
Sbjct: 411 ----------ACRVYKNLEFAEF 423



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 173/398 (43%), Gaps = 71/398 (17%)

Query: 4   QNTVSTNMLISGYVKS---GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
           + T + N L++GY K+   G LA AR LF+S+    AVS+  L+  +        A+++F
Sbjct: 36  KTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVF 95

Query: 61  VDMRTDGGSDPDYVTFATLLSGCSEPD------------------TANELIQVHADIIKF 102
             M        D  ++ T++SG S+                    + N ++   A     
Sbjct: 96  STMPVR-----DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDM 150

Query: 103 GYNSIL----------IICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKE 152
           G    L          I+  ++V  Y     +  A   F+ MP ++ VS+NA++ G+ K 
Sbjct: 151 GAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKN 210

Query: 153 GLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
               +A+++F  M +    +P+  T ++ L     L+ +  GRQVH + +K     ++ V
Sbjct: 211 SRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITV 270

Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
             +LL +Y K   + +A KLF EM   D V++N MI+ YA +   ++++KLF +++    
Sbjct: 271 GTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMK---- 326

Query: 272 DRSQFP-FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC-GRFEEA 329
           D    P + TLL+V+           IHT                L D   +C    +EA
Sbjct: 327 DEGVVPDWITLLAVLT--------ACIHT---------------GLCDFGIQCFETMQEA 363

Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
             I   + H S      M+    + G LE A+N+   M
Sbjct: 364 YNIEPQVDHYS-----CMVDLLCRAGLLERAVNMIHSM 396


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/682 (35%), Positives = 377/682 (55%), Gaps = 9/682 (1%)

Query: 74  VTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKE 133
           V FA+LL  C    +  E  ++HA+I+  G    L + N L+  Y K   ++ AR VF++
Sbjct: 1   VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEK 60

Query: 134 MPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALG 193
           +   +  S++ +I      GL   A++L+  M H G +         +SA   L  +  G
Sbjct: 61  IESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAW 252
           R + A +    F  +  V N+LL++Y K   +  ARK F +M  +   VS+  MI+ +A 
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFAL 180

Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA--NKLDLQIGRQIHTQTIVTTAISEV 310
           +     +L  FR++       ++  F ++L++ A  N   L  G+++H + I+   +   
Sbjct: 181 HGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLH-ELILDAGLDSS 239

Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCR 369
            V NSL++MY KCG  +EA+ +F       + + W+ MI+AY   G+  +AL+L+ +M  
Sbjct: 240 IVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDL 299

Query: 370 ANISADQATFASILRA-SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
             +  D+ TF S+L A S    +L+ G+ LH  +   G    +   +AL++MY + G L+
Sbjct: 300 EGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLE 359

Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
           DA++ F++M   N+V+W ALI+A AQ+G+  A   S+  M   G Q D++  LSVL ACS
Sbjct: 360 DALRVFEKMNHWNLVAWTALIAAFAQHGNVHAIDLSWR-MHLEGVQADNIVFLSVLHACS 418

Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
           H  ++E GL  F  M   + +R    HY+ MVD+L R G   EAE+L+  MPFEP  +  
Sbjct: 419 HAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEM 478

Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
            +++ +CR+  +     + A +L       DAAPYV MS+ YA   +W+ V++V++ M +
Sbjct: 479 KTLLAACRVSGDTPRGARVA-RLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAK 537

Query: 609 RGVRKVTAYSWVELKSKVH-VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
            GV+K   +S VE+K++VH  F  N   H +  EI  ++  L   +K+ GY PDT    H
Sbjct: 538 LGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTGQIGH 597

Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
             +E+ K + L  HSER+AIAF L+  P G PI V+KNLR C+DCHA  K+IS+  GR I
Sbjct: 598 RLEEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRI 657

Query: 728 TVRDSSRFHHFKDGFCSCRDFW 749
            VRD+ RFH F++G CSC D+W
Sbjct: 658 VVRDAYRFHRFENGTCSCGDYW 679



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 230/455 (50%), Gaps = 10/455 (2%)

Query: 10  NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
           N LI  Y K G +  AR +F  +      SW+I+IG        R A +L+  M  +G  
Sbjct: 39  NHLIQMYGKCGAMEEARAVFEKIESPNIFSWSIIIGACVDNGLARRALELYHWMDHEG-V 97

Query: 70  DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
             D V     +S CS   + +    + A I   G++   ++ NSL++ YCK   +D AR+
Sbjct: 98  RLDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARK 157

Query: 130 VFKEMPQKDS-VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA--ALSAGVG 186
            F++M    S VS+ A+I+GFA  G  + A+  F +M   G +P++ TF +  AL A   
Sbjct: 158 FFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSN 217

Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG-VSYNV 245
           L  +A G+++H  ++    +++  V N+LL++Y K   + EAR++F    +    ++++ 
Sbjct: 218 LNLLAAGKKLHELILDAG-LDSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWST 276

Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD-LQIGRQIHTQTIVT 304
           MI  Y+ N   +++L L++++     +  ++ F++LL   +   D L  GR +H +    
Sbjct: 277 MIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAK 336

Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
               ++ +A +L++MY + G+ E+A  +F  ++H + V WTA+I+A+ Q GN+  A++L 
Sbjct: 337 GLEKKMVLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGNV-HAIDLS 395

Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALLDMYAK 423
             M    + AD   F S+L A +    L  G       V   G        S ++D+ A+
Sbjct: 396 WRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLAR 455

Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGD 457
            G + +A +    MP E   +    L++AC  +GD
Sbjct: 456 CGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGD 490



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 5   NTVSTNMLISGYVKSGNLATARELFNSMVD-RTAVSWTILIGGYSQKNQFREAFKLFVDM 63
           +++  N L++ Y K G L  AR +F    D R  ++W+ +I  YS     R+A  L+  M
Sbjct: 238 SSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKM 297

Query: 64  RTDGGSDPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
             + G +PD  TF +LL  CS   DT  E   +H  +   G    +++  +L++ Y +  
Sbjct: 298 DLE-GLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYG 356

Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
            L+ A RVF++M   + V++ ALI  FA+ G N  AI L   M   G +  +  F + L 
Sbjct: 357 QLEDALRVFEKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLEGVQADNIVFLSVLH 415

Query: 183 AGVGLADIALG-----RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
           A      +  G       V  F V+          + ++DL ++   V EA +L   MP
Sbjct: 416 ACSHAVVLEAGLSCFQEMVADFGVRGGAAHY----SCMVDLLARCGRVAEAEELLHSMP 470


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.132    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,623,595,906
Number of Sequences: 23463169
Number of extensions: 414013640
Number of successful extensions: 1423865
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9444
Number of HSP's successfully gapped in prelim test: 3078
Number of HSP's that attempted gapping in prelim test: 1150265
Number of HSP's gapped (non-prelim): 81004
length of query: 749
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 599
effective length of database: 8,839,720,017
effective search space: 5294992290183
effective search space used: 5294992290183
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)