BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004487
(749 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/752 (60%), Positives = 584/752 (77%), Gaps = 3/752 (0%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP++NTVSTN +ISG+VK+G++++AR+LF++M DRT V+WTIL+G Y++ + F EAFKLF
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 61 VDM-RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY--NSILIICNSLVDS 117
M R+ + PD+VTF TLL GC++ N + QVHA +K G+ N L + N L+ S
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193
Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
YC++R LDLA +F+E+P+KDSV+FN LITG+ K+GL E+I LF++M+ G +PSDFTF
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 178 AAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
+ L A VGL D ALG+Q+HA V T F + V N +LD YSKHD V+E R LF EMPE
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
+D VSYNV+I+ Y+ +QY+ SL FRE+Q FDR FPF+T+LS+ AN LQ+GRQ+
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
H Q ++ TA S + V NSLVDMYAKC FEEA+ IF +L +TV WTA+IS YVQKG
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
L LF +M +N+ ADQ+TFA++L+ASA ASL LGKQLH+F+IRSG + NVFSGS L
Sbjct: 434 GAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
+DMYAK GS+KDA+Q F+EMP+RN VSWNALISA A NGD +A + +F M++SG QPDS
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
VS+L VL+ACSHCG +E+G +YF +M+ Y + PKK+HYA M+D+L R+G F EAEKLM
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWE 597
+MPFEPDEIMWSSV+N+CRIHKN A++AA++LF MEKLRDAA YV+MSNIYA AG+WE
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 598 SVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEG 657
V VKKAMRERG++KV AYSWVE+ K+HVF++ND+ HP +EI RKI L E+++EG
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Query: 658 YKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 717
YKPDTS + D DE++K+ESLKYHSERLA+AFALI+TPEG PI+VMKNLRAC DCHAAIK
Sbjct: 734 YKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIK 793
Query: 718 LISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
LISKI REITVRD+SRFHHF +G CSC D+W
Sbjct: 794 LISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/505 (29%), Positives = 241/505 (47%), Gaps = 39/505 (7%)
Query: 86 PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
P T + +V A IIK G+++ N +V+ + + AR+V+ EMP K++VS N +
Sbjct: 26 PATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 146 ITGFAKEG-------------------------------LNEEAIKLFVEMQHLG--FKP 172
I+G K G +EA KLF +M P
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 173 SDFTFAAALSA-GVGLADIALGRQVHAFVVKTNFVENVF--VANALLDLYSKHDCVVEAR 229
TF L + A+G QVHAF VK F N F V+N LL Y + + A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
LF E+PE D V++N +IT Y + Y ES+ LF +++ + S F FS +L V
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
D +G+Q+H ++ T + V N ++D Y+K R E + +F + + V + +IS
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
+Y Q E +L+ F EM FA++L +A L+SL +G+QLH + + S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
+ G++L+DMYAK ++A FK +P+R VSW ALIS Q G A LK F M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
S + D + +VL A + + G Q + + L + +VD+ + G
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSI 503
Query: 530 DEAEKLMAQMPFEPDEIMWSSVINS 554
+A ++ +MP + + + W+++I++
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 285/741 (38%), Positives = 444/741 (59%), Gaps = 9/741 (1%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+ Y+K N R++F+ M +R V+WT LI GY++ + E LF+ M+ +G + P
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQP 192
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
+ TFA L +E +QVH ++K G + + + NSL++ Y K + AR +F
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
+ K V++N++I+G+A GL+ EA+ +F M+ + S+ +FA+ + L ++
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV-SYNVMITCY 250
Q+H VVK F+ + + AL+ YSK +++A +LF E+ V V S+ MI+ +
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 251 AWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
N+ +E++ LF E++ ++F +S +L+ L + ++H Q + T
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSS 428
Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
V +L+D Y K G+ EEA ++F+ + V W+AM++ Y Q G E A+ +F E+ +
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 371 NISADQATFASILRASAEL-ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
I ++ TF+SIL A AS+ GKQ H F I+S S++ SALL MYAK G+++
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
A + FK E+++VSWN++IS AQ+G A L F++M + + D V+ + V +AC+H
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
GL+EEG +YF+ M + K+ P KEH + MVD+ R+G ++A K++ MP +W
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
+++ +CR+HK E + AA+++ M K D+A YV +SN+YA +G W+ ++V+K M ER
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAM-KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
V+K YSW+E+K+K + F A D HP ++I K+E+L +K GY+PDTS L D
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 670 DEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITV 729
D+E K L HSERLAIAF LI TP+GSP+L++KNLR C DCH IKLI+KI REI V
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 730 RDSSRFHHF-KDGFCSCRDFW 749
RDS+RFHHF DG CSC DFW
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 238/453 (52%), Gaps = 19/453 (4%)
Query: 9 TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
+N LI+ Y+K GN+ AR LF+ ++ V+W +I GY+ EA +F MR
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL--- 288
Query: 69 SDPDYV-----TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
+YV +FA+++ C+ Q+H ++K+G+ I +L+ +Y K
Sbjct: 289 ---NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 124 LDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALS 182
+ A R+FKE+ + VS+ A+I+GF + EEA+ LF EM+ G +P++FT++ L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
A + +VHA VVKTN+ + V ALLD Y K V EA K+F + + D V+
Sbjct: 406 A----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV-VANKLDLQIGRQIHTQT 301
++ M+ YA + + ++K+F EL ++F FS++L+V A + G+Q H
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
I + S + V+++L+ MYAK G E A+E+F V W +MIS Y Q G +AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDM 420
++F EM + + D TF + A + G++ ++R ++ S ++D+
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 421 YAKSGSLKDAIQTFKEMPE-RNIVSWNALISAC 452
Y+++G L+ A++ + MP W +++AC
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 263/553 (47%), Gaps = 72/553 (13%)
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
A +F + P +D S+ +L+ GF+++G +EA +LF+ + LG + F++ L
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
L D GRQ+H +K F+++V V +L+D Y K + RK+F EM E + V++ +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
I+ YA N E L LF +Q + F F+ L V+A + G Q+HT +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
+ V+NSL+++Y KCG +A+ +F S V W +MIS Y G EAL +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
M + +++FAS+++ A L L +QLH V++ GF+ + +AL+ Y+K +
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 427 LKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
+ DA++ FKE+ N+VSW A+IS QN + + F +M + G +P+ + +L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 486 ACS-------------------------------HCGLIEEGLQYFNSMTQKYKLRPKKE 514
A G +EE + F+ + K +
Sbjct: 406 ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV----- 460
Query: 515 HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVINSC---------------- 555
+++M+ ++G + A K+ ++ +P+E +SS++N C
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 556 ----RIHKNL--------EFAKK----AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESV 599
R+ +L +AKK +A+++FK ++ +D + +M + YA GQ
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 600 SQVKKAMRERGVR 612
V K M++R V+
Sbjct: 581 LDVFKEMKKRKVK 593
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 202/468 (43%), Gaps = 54/468 (11%)
Query: 228 ARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVAN 287
A LF + P D SY ++ ++ + + +E+ +LF + + FS++L V A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
D GRQ+H Q I + +V V SLVD Y K F++ +++F + + V WT +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGF 407
IS Y + +E L LF+ M + TFA+ L AE G Q+H+ V+++G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 408 MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFED 467
+ ++L+++Y K G+++ A F + +++V+WN++IS A NG L F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 468 MVQSGYQPDSVSLLSVLSACS-----------HCGLIEEG------------LQYFNSMT 504
M + + S SV+ C+ HC +++ G + Y
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 505 QKYKLRPKKE--------HYASMVDILCRSGCFDEAEKLMAQMP---FEPDEIMWSSVIN 553
LR KE + +M+ ++ +EA L ++M P+E +S ++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 554 SCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK 613
+ + E Q+ K R + A+ + Y G+ E ++V + ++ +
Sbjct: 406 ALPVISPSEVHA----QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI-- 459
Query: 614 VTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
+W + + + QT E I+ + E+ K G KP+
Sbjct: 460 ---VAWSAMLAG----------YAQTGETEAAIK-MFGELTKGGIKPN 493
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/749 (37%), Positives = 435/749 (58%), Gaps = 57/749 (7%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++VS N +ISGY+++G AR+LF+ M +R VSW ++I GY + +A +LF
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M + D ++ T+LSG Y +
Sbjct: 150 EIM-----PERDVCSWNTMLSG-----------------------------------YAQ 169
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
C+D AR VF MP+K+ VS+NAL++ + + EEA LF ++ ++
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCL 225
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
L V I RQ F N V +V N ++ Y++ + EAR+LF E P D
Sbjct: 226 LGGFVKKKKIVEARQ---FFDSMN-VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
++ M++ Y N +E+ +LF ++ +R++ ++ +L+ +++ +++
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFD- 336
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
V N+++ YA+CG+ EAK +F + V W AMI+ Y Q G+ EA
Sbjct: 337 ---VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
L LF++M R ++++F+S L A++ +L LGKQLH +++ G+ + F G+ALL M
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
Y K GS+++A FKEM ++IVSWN +I+ +++G + L+ FE M + G +PD ++
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
++VLSACSH GL+++G QYF +MTQ Y + P +HYA MVD+L R+G ++A LM MP
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
FEPD +W +++ + R+H N E A+ AAD++F ME ++ YV +SN+YA +G+W V
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP-ENSGMYVLLSNLYASSGRWGDVG 632
Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
+++ MR++GV+KV YSW+E+++K H F+ DE HP+ +EI +E L MKK GY
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
TS LHD +EE K ++YHSERLA+A+ ++ G PI V+KNLR C DCH AIK ++
Sbjct: 693 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 752
Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
+ITGR I +RD++RFHHFKDG CSC D+W
Sbjct: 753 RITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 68/306 (22%)
Query: 344 WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR-ASAELA------------ 390
W IS+Y++ G EAL +F M R + + + LR ELA
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 391 ------------SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
+ +LGK F I +V S + +L YA++G + DA F MP
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 439 ERNIVSWNALISACAQNG---DAQATLKSFEDMVQSGYQ--------------------- 474
E+N VSWNAL+SA QN +A KS E+ +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 475 ---PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE--HYASMVDILCRSGCF 529
D VS ++++ + G I+E Q F+ P ++ + +MV ++
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQNRMV 297
Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
+EA +L +MP E +E+ W++++ + +E AK +LF + R+ + + M
Sbjct: 298 EEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAK----ELFDVMPCRNVSTWNTMITG 352
Query: 590 YAVAGQ 595
YA G+
Sbjct: 353 YAQCGK 358
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 51/285 (17%)
Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
R N + A F S+ RA+ S K L ++ G S++ + + Y ++G
Sbjct: 27 RCNNAHGAANFHSLKRATQTQIQKSQTKPL----LKCG-DSDIKEWNVAISSYMRTGRCN 81
Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
+A++ FK MP + VS+N +IS +NG+ + K F++M + D VS ++
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIK--- 134
Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKE--HYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
G + + + +++ P+++ + +M+ ++GC D+A + +MP E +++
Sbjct: 135 --GYVRN--RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-EKNDV 189
Query: 547 MWSSVIN----------SCRIHKNLE-------------FAKKA----ADQLFKMEKLRD 579
W+++++ +C + K+ E F KK A Q F +RD
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249
Query: 580 AAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKS 624
+ + YA +G+ + + ++ E V+ V ++W + S
Sbjct: 250 VVSWNTIITGYAQSGK---IDEARQLFDESPVQDV--FTWTAMVS 289
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 271/745 (36%), Positives = 434/745 (58%), Gaps = 2/745 (0%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
+T N L+S Y GNL +A +F++M R AV++ LI G SQ +A +LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
DG +PD T A+L+ CS T Q+HA K G+ S I +L++ Y K +
Sbjct: 382 LDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
+ A F E ++ V +N ++ + + ++F +MQ P+ +T+ + L
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
+ L D+ LG Q+H+ ++KTNF N +V + L+D+Y+K + A + D VS+
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
MI Y ++L FR++ + + +S A L+ G+QIH Q V+
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
S++ N+LV +Y++CG+ EE+ F + W A++S + Q GN EEAL +F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
+ M R I + TF S ++A++E A++ GKQ+H+ + ++G+ S +AL+ MYAK
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
GS+ DA + F E+ +N VSWNA+I+A +++G L SF+ M+ S +P+ V+L+ VL
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
SACSH GL+++G+ YF SM +Y L PK EHY +VD+L R+G A++ + +MP +PD
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
++W +++++C +HKN+E + AA L ++E D+A YV +SN+YAV+ +W++ ++
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQ 919
Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSC 664
M+E+GV+K SW+E+K+ +H F D+ HP +EI ++L + + GY D
Sbjct: 920 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 979
Query: 665 ALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITG 724
L++ E K + HSE+LAI+F L++ P PI VMKNLR C DCHA IK +SK++
Sbjct: 980 LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 1039
Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
REI VRD+ RFHHF+ G CSC+D+W
Sbjct: 1040 REIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 295/570 (51%), Gaps = 6/570 (1%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
+TV N LI Y ++G + AR +F+ + + SW +I G S+ EA +LF DM
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
G Y F+++LS C + ++ Q+H ++K G++S +CN+LV Y + L
Sbjct: 281 VLGIMPTPY-AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
A +F M Q+D+V++N LI G ++ G E+A++LF M G +P T A+ + A
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
+ G+Q+HA+ K F N + ALL+LY+K + A F E + V +N
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
VM+ Y + + S ++FR++Q +Q+ + ++L DL++G QIH+Q I T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
V + L+DMYAK G+ + A +I + V WT MI+ Y Q ++AL F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
+M I +D+ + + A A L +L G+Q+H+ SGF S++ +AL+ +Y++
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
G ++++ F++ + ++WNAL+S Q+G+ + L+ F M + G ++ + S +
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
A S +++G Q +++ K + E +++ + + G +AEK ++ +
Sbjct: 700 KAASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKN 757
Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
E+ W+++IN+ H F +A D +M
Sbjct: 758 EVSWNAIINAYSKHG---FGSEALDSFDQM 784
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 255/497 (51%), Gaps = 2/497 (0%)
Query: 3 NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
+ N + L Y+ G+L A ++F+ M +RT +W +I + +N E F LFV
Sbjct: 117 DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR 176
Query: 63 MRTDGGSDPDYVTFATLLSGCSEPDTANELI-QVHADIIKFGYNSILIICNSLVDSYCKI 121
M ++ + P+ TF+ +L C A +++ Q+HA I+ G ++CN L+D Y +
Sbjct: 177 MVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN 235
Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
+DLARRVF + KD S+ A+I+G +K EAI+LF +M LG P+ + F++ L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 182 SAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGV 241
SA + + +G Q+H V+K F + +V NAL+ LY ++ A +F M + D V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 242 SYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQT 301
+YN +I + +++++LF+ + + ++L+ + L G+Q+H T
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 302 IVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
S K+ +L+++YAKC E A + F + V W M+ AY +L +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
+F +M I +Q T+ SIL+ L L LG+Q+HS +I++ F N + S L+DMY
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
AK G L A +++VSW +I+ Q L +F M+ G + D V L
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 482 SVLSACSHCGLIEEGLQ 498
+ +SAC+ ++EG Q
Sbjct: 596 NAVSACAGLQALKEGQQ 612
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 241/495 (48%), Gaps = 6/495 (1%)
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTA-NELIQVHADIIKFGYNSILIICNSLVDSYC 119
+D + G P++ T LL GC + + + +E ++H+ I+K G +S + L D Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
L A +VF EMP++ ++N +I A L E LFV M P++ TF+
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 180 ALSAGVGLADIALG--RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
L A G +A Q+HA ++ ++ V N L+DLYS++ V AR++F +
Sbjct: 192 VLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
D S+ MI+ + NE E+++LF ++ + + FS++LS L+IG Q+
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
H + S+ V N+LV +Y G A+ IF+N+S V + +I+ Q G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
E+A+ LF M + D T AS++ A + +L G+QLH++ + GF SN AL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDS 477
L++YAK ++ A+ F E N+V WN ++ A D + + + F M P+
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
+ S+L C G +E G Q +S K + + ++D+ + G D A ++
Sbjct: 491 YTYPSILKTCIRLGDLELGEQ-IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 538 QMPFEPDEIMWSSVI 552
+ + D + W+++I
Sbjct: 550 RFAGK-DVVSWTTMI 563
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 34/254 (13%)
Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
SL G++LHS +++ G SN L D Y G L A + F EMPER I +WN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGL 497
A F MV P+ + VL AC H ++ +GL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 498 Q----YFNSMTQKYK--------------LRPKKE-HYASMVDILCRSGCFDEAEKLMAQ 538
+ N + Y LR K + +M+ L ++ C EA +L
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 539 M---PFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
M P +SSV+++C+ ++LE ++ + K+ D A+ ++Y G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 596 WESVSQVKKAMRER 609
S + M +R
Sbjct: 339 LISAEHIFSNMSQR 352
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/750 (39%), Positives = 444/750 (59%), Gaps = 15/750 (2%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+S + KSG+L+ AR++FN M R AV+ L+ G ++ EA KLF+DM + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 72 DYVTFATLLSGCSEPDTANEL-----IQVHADIIKFGYNSILI-ICNSLVDSYCKIRCLD 125
+ ++ LLS E A E+ +VH +I G ++ I N LV+ Y K +
Sbjct: 309 E--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
ARRVF M KDSVS+N++ITG + G EA++ + M+ P FT ++LS+
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
L LG+Q+H +K NV V+NAL+ LY++ + E RK+F MPE D VS+N
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 246 MITCYAWNEQ-YKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
+I A +E+ E++ F Q ++ FS++LS V++ ++G+QIH +
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNL 363
E N+L+ Y KCG + ++IF+ ++ V W +MIS Y+ L +AL+L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606
Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
M + D +A++L A A +A+L G ++H+ +R+ S+V GSAL+DMY+K
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666
Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP-DSVSLLS 482
G L A++ F MP RN SWN++IS A++G + LK FE M G P D V+ +
Sbjct: 667 CGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG 726
Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
VLSACSH GL+EEG ++F SM+ Y L P+ EH++ M D+L R+G D+ E + +MP +
Sbjct: 727 VLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786
Query: 543 PDEIMWSSVINSC-RIH-KNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
P+ ++W +V+ +C R + + E KKAA+ LF++E +A YV + N+YA G+WE +
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP-ENAVNYVLLGNMYAAGGRWEDLV 845
Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
+ +K M++ V+K YSWV +K VH+F A D+ HP + I +K++ L ++M+ GY P
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905
Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS-PILVMKNLRACTDCHAAIKLI 719
T AL+D ++E K E L YHSE+LA+AF L + PI +MKNLR C DCH+A K I
Sbjct: 906 QTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYI 965
Query: 720 SKITGREITVRDSSRFHHFKDGFCSCRDFW 749
SKI GR+I +RDS+RFHHF+DG CSC DFW
Sbjct: 966 SKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 297/577 (51%), Gaps = 18/577 (3%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N LI+ Y+++G+ +AR++F+ M R VSW ++ GYS+ + +EA DM +G
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 70 DPDYVTFATLLSGCSEPDTANELI--QVHADIIKFGYNSILIICNSLVDSYCK-IRCLDL 126
Y F ++L C E + L Q+H + K Y ++ N L+ Y K I +
Sbjct: 100 SNQY-AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
A F ++ K+SVS+N++I+ +++ G A ++F MQ+ G +P+++TF + ++
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 187 LA--DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
L D+ L Q+ + K+ + ++FV + L+ ++K + ARK+F +M + V+ N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS-----VVANKLDLQIGRQIHT 299
++ + +E+ KLF ++ + D S + LLS +A ++ L+ GR++H
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
I T + V + N LV+MYAKCG +A+ +F ++ +V W +MI+ Q G
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALL 418
EA+ + M R +I T S L + A L LG+Q+H ++ G NV +AL+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457
Query: 419 DMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA-QATLKSFEDMVQSGYQPDS 477
+YA++G L + + F MPE + VSWN++I A A++ + + F + ++G + +
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 478 VSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA 537
++ SVLSA S E G Q + + K + + +++ + G D EK+ +
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 538 QMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
+M D + W+S+I S IH E KA D ++ M
Sbjct: 577 RMAERRDNVTWNSMI-SGYIHN--ELLAKALDLVWFM 610
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 301/592 (50%), Gaps = 25/592 (4%)
Query: 5 NTVSTNMLISGYVKS-GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
+ V +N+LIS Y K G++ A F + + +VSW +I YSQ R AF++F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 64 RTDGGSDPDYVTFATLLS-GCS--EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
+ DG S P TF +L++ CS EPD L Q+ I K G + L + + LV ++ K
Sbjct: 198 QYDG-SRPTEYTFGSLVTTACSLTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAK 255
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-GFKPSDFTF-- 177
L AR+VF +M +++V+ N L+ G ++ EEA KLF++M + P +
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 178 ----AAALSAGVGLADIALGRQVHAFVVKTNFVE-NVFVANALLDLYSKHDCVVEARKLF 232
+L+ VGL GR+VH V+ T V+ V + N L+++Y+K + +AR++F
Sbjct: 316 SSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 233 GEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQ 292
M + D VS+N MIT N + E+++ ++ ++ F + LS A+ +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 293 IGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYV 352
+G+QIH +++ V V+N+L+ +YA+ G E ++IF+++ V W ++I A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 353 Q-KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
+ + +L EA+ F+ RA ++ TF+S+L A + L+ LGKQ+H +++
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPE-RNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
+ +AL+ Y K G + + F M E R+ V+WN++IS N L M+Q
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
+G + DS +VLSA + +E G++ ++ + + L +++VD+ + G D
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
A + MP + W+S+I+ H E A K LF+ KL P
Sbjct: 672 YALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALK----LFETMKLDGQTP 718
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 246/472 (52%), Gaps = 18/472 (3%)
Query: 96 HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLN 155
H+ + K + + +CN+L+++Y + AR+VF EMP ++ VS+ +++G+++ G +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 156 EEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLADIALGRQVHAFVVKTNFVENVFVAN 213
+EA+ +M G + + F + L A +G I GRQ+H + K ++ + V+N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 214 ALLDLYSKH-DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD 272
L+ +Y K V A FG++ + VS+N +I+ Y+ + + ++F +Q+
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 273 RSQFPFSTLLSVVAN--KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
+++ F +L++ + + D+++ QI + ++++ V + LV +AK G A+
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILR-----A 385
++F + + V ++ V++ EEA LF++M + I ++ +L +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYS 322
Query: 386 SAELASLSLGKQLHSFVIRSG---FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
AE L G+++H VI +G FM + G+ L++MYAK GS+ DA + F M +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGI--GNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
VSWN++I+ QNG ++ ++ M + P S +L+S LS+C+ + G Q +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIHG 439
Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
+ K + +++ + +G +E K+ + MP E D++ W+S+I +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 201/463 (43%), Gaps = 53/463 (11%)
Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWN 253
R H+ + K ++V++ N L++ Y + V ARK+F EMP + VS+ +++ Y+ N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA--NKLDLQIGRQIHTQTIVTTAISEVK 311
++KE+L R++ +Q+ F ++L + + GRQIH + +
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 312 VANSLVDMYAKC-GRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
V+N L+ MY KC G A F ++ ++V W ++IS Y Q G+ A +F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 371 NISADQATFASILRASAELA--SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
+ TF S++ + L + L +Q+ + +SG ++++F GS L+ +AKSGSL
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDM-VQSGYQPDSVSLL------ 481
A + F +M RN V+ N L+ + + K F DM P+S +L
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 482 ---------------------------------SVLSACSHCGLIEEGLQYFNSMTQKYK 508
+++ + CG I + + F MT K
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 509 LRPKKEHYASMVDILCRSGCFDEA---EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAK 565
+ + SM+ L ++GCF EA K M + P S ++SC K + +
Sbjct: 381 VS-----WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 566 KAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
+ + K+ + + A+ +YA G ++ +M E
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 11/269 (4%)
Query: 277 PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL 336
P S + S V ++ R H++ +V + N+L++ Y + G A+++F +
Sbjct: 6 PLSFVQSCVGHR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 337 SHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSL-- 394
+ V W ++S Y + G +EAL +M + I ++Q F S+LRA E+ S+ +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 395 GKQLHSFVIRSGFMSNVFSGSALLDMYAKS-GSLKDAIQTFKEMPERNIVSWNALISACA 453
G+Q+H + + + + + L+ MY K GS+ A+ F ++ +N VSWN++IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 454 QNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM---TQKYKLR 510
Q GD ++ + F M G +P + S+++ + C L E ++ + QK L
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 511 PKKEHYASMVDILCRSGCFDEAEKLMAQM 539
+ +V +SG A K+ QM
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
+ V + L+ Y K G L A FN+M R + SW +I GY++ Q EA KLF M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSY 118
DG + PD+VTF +LS CS HA +++ G+ S+ DSY
Sbjct: 713 LDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHF----ESMSDSY 751
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/754 (36%), Positives = 443/754 (58%), Gaps = 13/754 (1%)
Query: 2 PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTIL----IGGYSQKNQFREAF 57
PN+ T+ ISG + A + F + D ++VS I + Y Q+
Sbjct: 244 PNEITLRLLARISG---DDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300
Query: 58 KLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
K F DM + + D VTF +L+ + D+ QVH +K G + +L + NSL++
Sbjct: 301 KCFADM-VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 118 YCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF 177
YCK+R AR VF M ++D +S+N++I G A+ GL EA+ LF+++ G KP +T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 178 AAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
+ L A L + ++L +QVH +K N V + FV+ AL+D YS++ C+ EA LF E
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERH 478
Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGR 295
D V++N M+ Y + ++LKLF L + +RS F +T+ + G+
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
Q+H I + ++ V++ ++DMY KCG A+ F ++ V WT MIS ++ G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGS 415
E A ++F +M + D+ T A++ +AS+ L +L G+Q+H+ ++ ++ F G+
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 657
Query: 416 ALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQP 475
+L+DMYAK GS+ DA FK + NI +WNA++ AQ+G+ + TL+ F+ M G +P
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
D V+ + VLSACSH GL+ E ++ SM Y ++P+ EHY+ + D L R+G +AE L
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
+ M E M+ +++ +CR+ + E K+ A +L ++E L D++ YV +SN+YA A +
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL-DSSAYVLLSNMYAAASK 836
Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKK 655
W+ + + M+ V+K +SW+E+K+K+H+F +D + QT I RK++++++++K+
Sbjct: 837 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQ 896
Query: 656 EGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 715
EGY P+T L D +EE K +L YHSE+LA+AF L++TP +PI V+KNLR C DCH A
Sbjct: 897 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 956
Query: 716 IKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
+K I+K+ REI +RD++RFH FKDG CSC D+W
Sbjct: 957 MKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 258/560 (46%), Gaps = 58/560 (10%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQ-----FREAFKLFVDMR 64
N LIS Y K G+L AR +F+ M DR VSW ++ Y+Q ++ ++AF LF +R
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
D +T + +L C H K G + + +LV+ Y K +
Sbjct: 138 QDVVY-TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
+ +F+EMP +D V +N ++ + + G EEAI L G P++ T L A
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--RLLAR 254
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
+ D G QV +F AN +D + +F N
Sbjct: 255 ISGDDSDAG-QVKSF------------ANG-------NDASSVSEIIF----------RN 284
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
++ Y + QY LK F ++ + + Q F +L+ L +G+Q+H +
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
+ V+NSL++MY K +F A+ +F N+S + W ++I+ Q G EA+ LF
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 365 IEMCRANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
+++ R + DQ T S+L+A++ L LSL KQ+H I+ +S+ F +AL+D Y++
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
+ +K+A F E ++V+WNA+++ Q+ D TLK F M + G + D +L +V
Sbjct: 465 NRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL----MAQM 539
C I +G Q Y ++ + +D+ SG D K AQ
Sbjct: 524 FKTCGFLFAINQGKQ-----VHAYAIKSGYD-----LDLWVSSGILDMYVKCGDMSAAQF 573
Query: 540 PFE----PDEIMWSSVINSC 555
F+ PD++ W+++I+ C
Sbjct: 574 AFDSIPVPDDVAWTTMISGC 593
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 208/466 (44%), Gaps = 47/466 (10%)
Query: 96 HADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAK---- 151
HA I+ F N + N+L+ Y K L ARRVF +MP +D VS+N+++ +A+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 152 --EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENV 209
E + ++A LF ++ S T + L + + H + K +
Sbjct: 122 VVENI-QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 210 FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFT 269
FVA AL+++Y K V E + LF EMP D V +N+M+ Y +E++ L +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 270 RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEA 329
+ ++ L + + D + ++ +SE+
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASS-VSEI------------------- 280
Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAEL 389
IF N +S Y+ G L F +M +++ DQ TF +L + ++
Sbjct: 281 --IFRNKG----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 390 ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALI 449
SL+LG+Q+H ++ G + ++L++MY K A F M ER+++SWN++I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 450 SACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM-TQKYK 508
+ AQNG + F +++ G +PD ++ SVL A S + EGL + K
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIK 445
Query: 509 LRPKKEHYAS--MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
+ + + S ++D R+ C EAE L + F D + W++++
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMM 489
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 43/372 (11%)
Query: 188 ADIALGRQVHAFVVKTNFVENV--FVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
+D+ LG+ HA ++ F EN F+ N L+ +YSK + AR++F +MP+ D VS+N
Sbjct: 53 SDLMLGKCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 246 MITCYAWN-----EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
++ YA + E +++ LFR L+ S+ S +L + + + H
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
+ VA +LV++Y K G+ +E K +F + + V W M+ AY++ G EEA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
++L + ++ ++ T + R S + + Q+ SF +N S++ ++
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSF-------ANGNDASSVSEI 280
Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
++ L + + + G A LK F DMV+S + D V+
Sbjct: 281 IFRNKGLSEYLHS----------------------GQYSALLKCFADMVESDVECDQVTF 318
Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
+ +L+ + G Q + M K L S++++ C+ F A + M
Sbjct: 319 ILMLATAVKVDSLALG-QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 541 FEPDEIMWSSVI 552
E D I W+SVI
Sbjct: 378 -ERDLISWNSVI 388
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
LR + + L LGK H+ ++ F + L+ MY+K GSL A + F +MP+R++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 443 VSWNALISACAQNGDA-----QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGL 497
VSWN++++A AQ+ + Q F + Q ++L +L C H G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS- 164
Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
+ F+ K L + ++V+I + G E + L +MP+ D ++W+ ++ +
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML---KA 220
Query: 558 HKNLEFAKKAAD 569
+ + F ++A D
Sbjct: 221 YLEMGFKEEAID 232
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/711 (37%), Positives = 416/711 (58%), Gaps = 44/711 (6%)
Query: 78 TLLSGCSEPDTANELIQVHADIIK---FGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
TL+ + + ++ Q+HA I+ + S I+ + Y ++ L A +FK +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLLFKTL 65
Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
+++ ++I F + L +A+ FVEM+ G P F + L + + D+ G
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 195 QVHAFVVKTNFVENVFVANALLDLYSK-------------------------------HD 223
VH F+V+ +++ NAL+++Y+K
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 224 CVV-----EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPF 278
C++ R++F MP D VSYN +I YA + Y+++L++ RE+ T F
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 279 STLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
S++L + + +D+ G++IH I S+V + +SLVDMYAK R E+++ +F+ L
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
+ W ++++ YVQ G EAL LF +M A + F+S++ A A LA+L LGKQL
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
H +V+R GF SN+F SAL+DMY+K G++K A + F M + VSW A+I A +G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
+ FE+M + G +P+ V+ ++VL+ACSH GL++E YFNSMT+ Y L + EHYA+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
+ D+L R+G +EA +++M EP +WS++++SC +HKNLE A+K A+++F ++
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS-E 544
Query: 579 DAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQ 638
+ YV M N+YA G+W+ +++++ MR++G+RK A SW+E+K+K H F + D HP
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604
Query: 639 TNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGS 698
++I ++ +M++M+KEGY DTS LHD DEE K E L HSERLA+AF +INT G+
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGT 664
Query: 699 PILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
I V KN+R CTDCH AIK ISKIT REI VRD+SRFHHF G CSC D+W
Sbjct: 665 TIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 246/486 (50%), Gaps = 43/486 (8%)
Query: 8 STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
S +++IS Y L A LF ++ ++W +I ++ ++ F +A FV+MR G
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI------ 121
PD+ F ++L C+ VH I++ G + L N+L++ Y K+
Sbjct: 101 RC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 122 -------------------------RC-----LDLARRVFKEMPQKDSVSFNALITGFAK 151
C +D RRVF+ MP+KD VS+N +I G+A+
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 152 EGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFV 211
G+ E+A+++ EM KP FT ++ L D+ G+++H +V++ +V++
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 212 ANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRF 271
++L+D+Y+K + ++ ++F + DG+S+N ++ Y N +Y E+L+LFR++ +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 272 DRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
FS+++ A+ L +G+Q+H + S + +A++LVDMY+KCG + A++
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
IF ++ + V WTA+I + G+ EA++LF EM R + +Q F ++L A + +
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 392 LSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNA 447
+ +S G + +A+ D+ ++G L++A +M P ++ W+
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV--WST 517
Query: 448 LISACA 453
L+S+C+
Sbjct: 518 LLSSCS 523
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 182/344 (52%), Gaps = 7/344 (2%)
Query: 21 NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSD--PDYVTFAT 78
+ + R +F M + VS+ +I GY+Q + +A ++ +M G +D PD T ++
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM---GTTDLKPDSFTLSS 247
Query: 79 LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
+L SE + ++H +I+ G +S + I +SLVD Y K ++ + RVF + +D
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
+S+N+L+ G+ + G EA++LF +M KP F++ + A LA + LG+Q+H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
+V++ F N+F+A+AL+D+YSK + ARK+F M +D VS+ +I +A + E
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVAN-KLDLQIGRQIHTQTIVTTAISEVKVANSLV 317
++ LF E++ +Q F +L+ ++ L + ++ T V E++ ++
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 318 DMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
D+ + G+ EEA + + T W+ ++S+ NLE A
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELA 531
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N + L+ Y K GN+ AR++F+ M VSWT +I G++ EA LF +M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANE-------LIQVH------------ADI------ 99
G P+ V F +L+ CS +E + +V+ AD+
Sbjct: 437 RQ-GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 100 IKFGYNSILIIC--------NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALI---TG 148
++ YN I +C ++L+ S + L+LA +V +++ DS + A +
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 149 FAKEGLNEEAIKLFVEMQHLGFK 171
+A G +E KL + M+ G +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLR 578
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 277/741 (37%), Positives = 440/741 (59%), Gaps = 4/741 (0%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N L+ Y + G L AR++F+ M R VSW LI GYS + EA +++ +++ +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWI 203
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
PD T +++L + +H +K G NS++++ N LV Y K R ARR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
VF EM +DSVS+N +I G+ K + EE++++F+E FKP T ++ L A L D
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRD 322
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
++L + ++ +++K FV V N L+D+Y+K ++ AR +F M D VS+N +I+
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
Y + E++KLF+ + + L+SV DL+ G+ +H+ I + +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
+ V+N+L+DMYAKCG ++ +IF+++ TV W +ISA V+ G+ L + +M +
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
+ + D ATF L A LA+ LGK++H ++R G+ S + G+AL++MY+K G L++
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
+ + F+ M R++V+W +I A G+ + L++F DM +SG PDSV ++++ ACSH
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSH 622
Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
GL++EGL F M YK+ P EHYA +VD+L RS +AE+ + MP +PD +W+
Sbjct: 623 SGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWA 682
Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
SV+ +CR ++E A++ + ++ ++ D + SN YA +W+ VS ++K+++++
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT-SCALHD 668
+ K YSW+E+ VHVF++ D+ PQ+ I + +E L M KEGY PD + +
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNL 801
Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
E+EE K + HSERLAIAF L+NT G+P+ VMKNLR C DCH KLISKI GREI
Sbjct: 802 EEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREIL 861
Query: 729 VRDSSRFHHFKDGFCSCRDFW 749
VRD++RFH FKDG CSC+D W
Sbjct: 862 VRDANRFHLFKDGTCSCKDRW 882
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 262/502 (52%), Gaps = 4/502 (0%)
Query: 84 SEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM-PQKDSVSF 142
S NEL ++HA +I G +S L+D Y R + VF+ + P K+ +
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
N++I F+K GL EA++ + +++ P +TF + + A GL D +G V+ ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKL 262
F ++FV NAL+D+YS+ + AR++F EMP D VS+N +I+ Y+ + Y+E+L++
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 263 FRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAK 322
+ EL+ + F S++L N L ++ G+ +H + + S V V N LV MY K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
R +A+ +F + +V + MI Y++ +EE++ +F+E D T +S+
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSV 313
Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
LRA L LSL K ++++++++GF+ + L+D+YAK G + A F M ++
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 443 VSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNS 502
VSWN++IS Q+GD +K F+ M+ Q D ++ L ++S + ++ G + +S
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHS 432
Query: 503 MTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLE 562
K + +++D+ + G ++ K+ + M D + W++VI++C +
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFA 491
Query: 563 FAKKAADQLFKMEKLRDAAPYV 584
+ Q+ K E + D A ++
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFL 513
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 88/315 (27%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMV------DRTAVSWTI------------ 42
M ++TVS N +ISGY++SG+L A +LF M+ D I
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 43 ---------------------LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLS 81
LI Y++ + ++ K+F M T D VT+ T++S
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-----DTVTWNTVIS 482
Query: 82 GCSE--------------------PDTANELI---------------QVHADIIKFGYNS 106
C PD A L+ ++H +++FGY S
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
L I N+L++ Y K CL+ + RVF+ M ++D V++ +I + G E+A++ F +M+
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 167 HLGFKPSDFTFAAALSA--GVGLADIALGRQVHAF-VVKTNFVENVFVAN--ALLDLYSK 221
G P F A + A GL D L F +KT++ + + + ++DL S+
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLA----CFEKMKTHYKIDPMIEHYACVVDLLSR 658
Query: 222 HDCVVEARKLFGEMP 236
+ +A + MP
Sbjct: 659 SQKISKAEEFIQAMP 673
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM-PER 440
I RA + ++L+ +++H+ VI G S+ F L+D Y+ ++ F+ + P +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
N+ WN++I A ++NG L+ + + +S PD + SV+ AC+ E G +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 501 NSMTQKYKLRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
Q + + + + ++VD+ R G A ++ +MP D + W+S+I+ H
Sbjct: 130 E---QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSH 185
Query: 559 KNLEFAKKAADQL 571
E A + +L
Sbjct: 186 GYYEEALEIYHEL 198
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/738 (36%), Positives = 425/738 (57%), Gaps = 3/738 (0%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+S + + G++ A +F + + V + ++ G+++ + +A + FV MR D +P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEP 133
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
F LL C + ++H ++K G++ L L + Y K R ++ AR+VF
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
MP++D VS+N ++ G+++ G+ A+++ M KPS T + L A L I+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
+G+++H + +++ F V ++ AL+D+Y+K + AR+LF M E + VS+N MI Y
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
NE KE++ +F+++ + L A+ DL+ GR IH ++ V
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
V NSL+ MY KC + A +F L + V W AMI + Q G +ALN F +M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
+ D T+ S++ A AEL+ K +H V+RS NVF +AL+DMYAK G++ A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
F M ER++ +WNA+I +G +A L+ FE+M + +P+ V+ LSV+SACSH G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
L+E GL+ F M + Y + +HY +MVD+L R+G +EA + QMP +P ++ ++
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
+ +C+IHKN+ FA+KAA++LF++ D +V ++NIY A WE V QV+ +M +G+
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNP-DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
RK S VE+K++VH F + HP + +I +E L+ +K+ GY PDT+ L E+
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVEN- 731
Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
++K + L HSE+LAI+F L+NT G+ I V KNLR C DCH A K IS +TGREI VRD
Sbjct: 732 DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRD 791
Query: 732 SSRFHHFKDGFCSCRDFW 749
RFHHFK+G CSC D+W
Sbjct: 792 MQRFHHFKNGACSCGDYW 809
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 248/500 (49%), Gaps = 8/500 (1%)
Query: 77 ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ 136
A LL CS + EL Q+ + K G LV +C+ +D A RVF+ +
Sbjct: 41 ALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 137 KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQV 196
K +V ++ ++ GFAK ++A++ FV M++ +P + F L A++ +G+++
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
H +VK+ F ++F L ++Y+K V EARK+F MPE D VS+N ++ Y+ N
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
+ +L++ + + S ++L V+ + +G++IH + + S V ++ +L
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
VDMYAKCG E A+++F + + V W +MI AYVQ N +EA+ +F +M +
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
+ L A A+L L G+ +H + G NV ++L+ MY K + A F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
+ R +VSWNA+I AQNG L F M +PD+ + +SV++A + +
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
++ + + + L ++VD+ + G A +L+ M E W+++I+
Sbjct: 458 -KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYG 515
Query: 557 IHKNLEFAKKAADQLFKMEK 576
H F K A + +M+K
Sbjct: 516 THG---FGKAALELFEEMQK 532
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 223/480 (46%), Gaps = 40/480 (8%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++ VS N +++GY ++G A E+ SM + E K
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE--------------------ENLK-- 233
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
P ++T ++L S + ++H ++ G++S++ I +LVD Y K
Sbjct: 234 ----------PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
L+ AR++F M +++ VS+N++I + + +EA+ +F +M G KP+D + A
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
L A L D+ GR +H V+ NV V N+L+ +Y K V A +FG++
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
VS+N MI +A N + ++L F +++ F + ++++ +A + IH
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
+ + V V +LVDMYAKCG A+ IF +S W AMI Y G + A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG---SAL 417
L LF EM + I + TF S++ A + + G L F + S S A+
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMDHYGAM 581
Query: 418 LDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQSGYQPD 476
+D+ ++G L +A +MP + V+ + A++ AC + + K+ E + + PD
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE--LNPD 639
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/669 (38%), Positives = 377/669 (56%), Gaps = 32/669 (4%)
Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
N+L+ +Y K + F+++P +D V++N LI G++ GL A+K + M+
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
+ T L ++LG+Q+H V+K F + V + LL +Y+ C+ +A+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 231 LFGEMP------------------------------EVDGVSYNVMITCYAWNEQYKESL 260
+F + E D VS+ MI A N KE++
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 261 KLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMY 320
+ FRE++ Q+PF ++L + G+QIH I T + V ++L+DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 321 AKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA 380
KC AK +F + + V WTAM+ Y Q G EEA+ +F++M R+ I D T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 381 SILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER 440
+ A A ++SL G Q H I SG + V ++L+ +Y K G + D+ + F EM R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
+ VSW A++SA AQ G A T++ F+ MVQ G +PD V+L V+SACS GL+E+G +YF
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
MT +Y + P HY+ M+D+ RSG +EA + + MPF PD I W++++++CR N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWV 620
LE K AA+ L +++ A Y +S+IYA G+W+SV+Q+++ MRE+ V+K SW+
Sbjct: 556 LEIGKWAAESLIELDP-HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 621 ELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKY 680
+ K K+H F+A+DE P ++I K+E L ++ GYKPDTS HD +E +KV+ L Y
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 681 HSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKD 740
HSERLAIAF LI P G PI V KNLR C DCH A K IS +TGREI VRD+ RFH FKD
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 741 GFCSCRDFW 749
G CSC DFW
Sbjct: 735 GTCSCGDFW 743
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 261/519 (50%), Gaps = 33/519 (6%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+P N S N L+ Y K+G ++ F + DR V+W +LI GYS A K +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M D ++ VT T+L S + Q+H +IK G+ S L++ + L+ Y
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 121 IRCLDLARRVFKEMP------------------------------QKDSVSFNALITGFA 150
+ C+ A++VF + +KDSVS+ A+I G A
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
+ GL +EAI+ F EM+ G K + F + L A GL I G+Q+HA +++TNF ++++
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
V +AL+D+Y K C+ A+ +F M + + VS+ M+ Y + +E++K+F ++Q +
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAK 330
D + +S AN L+ G Q H + I + I V V+NSLV +Y KCG +++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 331 EIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELA 390
+F ++ V WTAM+SAY Q G E + LF +M + + D T ++ A +
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 391 SLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNAL 448
+ G++ + G + ++ S ++D++++SG L++A++ MP + + W L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 449 ISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSVLSA 486
+SAC G+ + + E +++ + P +LLS + A
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 194/428 (45%), Gaps = 74/428 (17%)
Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFG-------------------- 233
+ +H +++ F+ N ++ Y+ AR++F
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 234 -----------EMPEVDGVSYNVMITCYAWNEQYKESLKLFREL--QFTRFDRSQFPFST 280
++P+ DGV++NV+I Y+ + ++K + + F+ + ++ T
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA-NLTRVTLMT 144
Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
+L + ++ + +G+QIH Q I S + V + L+ MYA G +AK++F L +
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 341 T------------------------------VPWTAMISAYVQKGNLEEALNLFIEMCRA 370
T V W AMI Q G +EA+ F EM
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
+ DQ F S+L A L +++ GKQ+H+ +IR+ F +++ GSAL+DMY K L A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
F M ++N+VSW A++ Q G A+ +K F DM +SG PD +L +SAC++
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYA----SMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
+EEG Q+ + HY S+V + + G D++ +L +M D +
Sbjct: 385 SSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAV 438
Query: 547 MWSSVINS 554
W++++++
Sbjct: 439 SWTAMVSA 446
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
N+FS + LL Y+K+G + + TF+++P+R+ V+WN LI + +G A +K++ M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 470 QS-GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY----ASMVDILC 524
+ V+L+++L S G + G Q + ++ E Y + ++ +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV-----IKLGFESYLLVGSPLLYMYA 185
Query: 525 RSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK-MEKLRDAAPY 583
GC +A+K+ + + + +M++S++ +E A QLF+ MEK D+ +
Sbjct: 186 NVGCISDAKKVFYGLD-DRNTVMYNSLMGGLLACGMIE----DALQLFRGMEK--DSVSW 238
Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVR 612
AM A G + + + M+ +G++
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 108/269 (40%), Gaps = 28/269 (10%)
Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
K +H +IR+ F + ++ YA S A + F +P+ N+ SWN L+ A ++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
G +FE + D V+ ++ S GL+ ++ +N+M + + +
Sbjct: 86 GLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 516 YASMVDILCRSGCFDEAEKLMAQ---MPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLF 572
+M+ + +G +++ Q + FE ++ S ++ ++ N+ A +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVFY 198
Query: 573 KMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTAN 632
++ R+ Y ++ G E Q+ + M + V SW + +
Sbjct: 199 GLDD-RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV------SWAAMIKGL------ 245
Query: 633 DELHPQTNEIRRKIENLMQEMKKEGYKPD 661
N + ++ +EMK +G K D
Sbjct: 246 -----AQNGLAKEAIECFREMKVQGLKMD 269
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/749 (34%), Positives = 422/749 (56%), Gaps = 12/749 (1%)
Query: 4 QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
QN + L++ Y GN+A AR F+ + +R +W ++I GY + E + F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 64 RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
G PDY TF ++L C N ++H +KFG+ + + SL+ Y + +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGN---KIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD-FTFAAALS 182
+ AR +F EMP +D S+NA+I+G+ + G +EA+ L G + D T + LS
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLS 255
Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
A D G +H++ +K +FV+N L+DLY++ + + +K+F M D +S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
+N +I Y NEQ ++ LF+E++ +R +L S+++ D++ R + T+
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 303 VTTA-ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEAL 361
+ ++ + N++V MYAK G + A+ +F L + + W +IS Y Q G EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 362 NLF-IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDM 420
++ I I+A+Q T+ S+L A ++ +L G +LH ++++G +VF ++L DM
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 421 YAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSL 480
Y K G L+DA+ F ++P N V WN LI+ +G + + F++M+ G +PD ++
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 481 LSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
+++LSACSH GL++EG F M Y + P +HY MVD+ R+G + A K + M
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 541 FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVS 600
+PD +W +++++CR+H N++ K A++ LF++E +V +SN+YA AG+WE V
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHVGYHVLLSNMYASAGKWEGVD 674
Query: 601 QVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKP 660
+++ +G+RK +S +E+ +KV VF ++ HP E+ R++ L ++K GY P
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734
Query: 661 DTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLIS 720
D L D +++ K L HSERLAIAFALI TP + I + KNLR C DCH+ K IS
Sbjct: 735 DHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFIS 794
Query: 721 KITGREITVRDSSRFHHFKDGFCSCRDFW 749
KIT REI VRDS+RFHHFK+G CSC D+W
Sbjct: 795 KITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 262/553 (47%), Gaps = 20/553 (3%)
Query: 52 QFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
+F + D +G + TL C+ +A L HA ++ + I
Sbjct: 33 EFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCL---HARLVVSKQIQNVCIS 89
Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF-VEMQHLGF 170
LV+ YC + + LAR F + +D ++N +I+G+ + G + E I+ F + M G
Sbjct: 90 AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
P TF + L A + D G ++H +K F+ +V+VA +L+ LYS++ V AR
Sbjct: 150 TPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
LF EMP D S+N MI+ Y + KE+L L L+ +LLS D
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262
Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
G IH+ +I SE+ V+N L+D+YA+ GR + +++F + + W ++I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSG-FMS 409
Y A++LF EM + I D T S+ ++L + + + F +R G F+
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
++ G+A++ MYAK G + A F +P +++SWN +IS AQNG A ++ + M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 470 QSG-YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGC 528
+ G + + +SVL ACS G + +G++ + K L S+ D+ + G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGR 501
Query: 529 FDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA----KKAADQLFKMEKLRDAAPYV 584
++A L Q+P + + W+++I H + E A K+ D+ K + +
Sbjct: 502 LEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 585 AMSNIYAV-AGQW 596
A S+ V GQW
Sbjct: 561 ACSHSGLVDEGQW 573
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 250/528 (47%), Gaps = 53/528 (10%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++ S N +ISGY +SGN +EA L
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNA-------------------------------KEALTL- 238
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
++G D VT +LLS C+E N + +H+ IK G S L + N L+D Y +
Sbjct: 239 ----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEE---AIKLFVEMQHLGFKPSDFTF 177
L ++VF M +D +S+N++I + LNE+ AI LF EM+ +P T
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYE---LNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 178 AAALSAGVGLADIALGRQVHAFVVKTN-FVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
+ S L DI R V F ++ F+E++ + NA++ +Y+K V AR +F +P
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
D +S+N +I+ YA N E+++++ + + +Q + ++L + L+ G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKG 355
++H + + +V V SL DMY KCGR E+A +F + +++VPW +I+ + G
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 356 NLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFV-IRSGFMSNVFSG 414
+ E+A+ LF EM + D TF ++L A + + G+ + G ++
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 415 SALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
++DMY ++G L+ A++ K M P+ +I W AL+SAC +G+ + E + +
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASI--WGALLSACRVHGNVDLGKIASEHLFE- 648
Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
+P+ V +LS EG+ S+ LR K ++SM
Sbjct: 649 -VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR-KTPGWSSM 694
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/739 (35%), Positives = 418/739 (56%), Gaps = 6/739 (0%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N ++ +V+ GNL A +F M +R SW +L+GGY+++ F EA L+ M GG
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 70 DPDYVTFATLLSGCSE-PDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
PD TF +L C PD A +VH ++++GY + + N+L+ Y K + AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGK-EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
+F MP++D +S+NA+I+G+ + G+ E ++LF M+ L P T + +SA L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
D LGR +HA+V+ T F ++ V N+L +Y EA KLF M D VS+ MI+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
Y +N +++ +R + + + +LS A DL G ++H I IS
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
V VAN+L++MY+KC ++A +IF N+ + + WT++I+ EAL +F+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 369 RANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLK 428
+ + + T + L A A + +L GK++H+ V+R+G + F +ALLDMY + G +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
A F ++++ SWN L++ ++ G ++ F+ MV+S +PD ++ +S+L CS
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
++ +GL YF+ M + Y + P +HYA +VD+L R+G EA K + +MP PD +W
Sbjct: 610 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
+++N+CRIH ++ + +A +F+++K + Y+ + N+YA G+W V++V++ M+E
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDK-KSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHD 668
G+ SWVE+K KVH F ++D+ HPQT EI +E ++M + G + + D
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD 787
Query: 669 EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREIT 728
E E + E HSER AIAF LINT G PI V KNL C +CH +K ISK REI+
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREIS 847
Query: 729 VRDSSRFHHFKDGFCSCRD 747
VRD+ FHHFKDG CSC D
Sbjct: 848 VRDAEHFHHFKDGECSCGD 866
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/706 (37%), Positives = 410/706 (58%), Gaps = 71/706 (10%)
Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK 171
N+++ +Y K +D F ++PQ+DSVS+ +I G+ G +AI++ +M G +
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
P+ FT L++ + G++VH+F+VK NV V+N+LL++Y+K + A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 232 FGEMPEVDGVSYNVMITCY----------------------AWNEQYK---------ESL 260
F M D S+N MI + WN +L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 261 KLF-RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA--ISEVKVANSLV 317
+F + L+ + +F +++LS AN L IG+QIH+ IVTT IS + V N+L+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH-IVTTGFDISGI-VLNALI 321
Query: 318 DMYAKCGRFE---------------------------------EAKEIFANLSHISTVPW 344
MY++CG E +AK IF +L V W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
TAMI Y Q G+ EA+NLF M + T A++L ++ LASLS GKQ+H ++
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 405 SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLK 463
SG + +V +AL+ MYAK+G++ A + F + ER+ VSW ++I A AQ+G A+ L+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 464 SFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDIL 523
FE M+ G +PD ++ + V SAC+H GL+ +G QYF+ M K+ P HYA MVD+
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 524 CRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPY 583
R+G EA++ + +MP EPD + W S++++CR+HKN++ K AA++L +E ++ Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP-ENSGAY 620
Query: 584 VAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIR 643
A++N+Y+ G+WE ++++K+M++ V+K +SW+E+K KVHVF D HP+ NEI
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 644 RKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVM 703
++ + E+KK GY PDT+ LHD +EE+K + L++HSE+LAIAF LI+TP+ + + +M
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740
Query: 704 KNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
KNLR C DCH AIK ISK+ GREI VRD++RFHHFKDGFCSCRD+W
Sbjct: 741 KNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 159/591 (26%), Positives = 274/591 (46%), Gaps = 75/591 (12%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP + S N ++S Y K G++ + E F+ + R +VSWT +I GY Q+ +A ++
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
DM + G +P T +L+ + +VH+ I+K G + + NSL++ Y K
Sbjct: 135 GDMVKE-GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 121 -------------------------------IRCLDLARRVFKEMPQKDSVSFNALITGF 149
+ +DLA F++M ++D V++N++I+GF
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 150 AKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
+ G + A+ +F +M + P FT A+ LSA L + +G+Q+H+ +V T F +
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 209 VFVANALLDLYSKHDCVVEARKL-----------------------FGEMPEV------- 238
V NAL+ +YS+ V AR+L G+M +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 239 ---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR 295
D V++ MI Y + Y E++ LFR + + + + +LSV ++ L G+
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 296 QIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQK 354
QIH + + I V V+N+L+ MYAK G A F + TV WT+MI A Q
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
G+ EEAL LF M + D T+ + A ++ G+Q + + S
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 415 SA-LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
A ++D++ ++G L++A + ++MP E ++V+W +L+SAC + + + E ++
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL-- 611
Query: 473 YQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
+P++ S L+ S CG EE + SM R KKE S +++
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG---RVKKEQGFSWIEV 659
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 216/496 (43%), Gaps = 99/496 (19%)
Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM-------------------- 235
VH V+K+ + +V++ N L+++YSK + ARKLF EM
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 236 -----------PEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSV 284
P+ D VS+ MI Y QY +++++ ++ + +QF + +L+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 285 VANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEI------------ 332
VA ++ G+++H+ + V V+NSL++MYAKCG AK +
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 333 -------------------FANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN-I 372
F ++ V W +MIS + Q+G AL++F +M R + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGF------------MSNVFSG------ 414
S D+ T AS+L A A L L +GKQ+HS ++ +GF M + G
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 415 ---------------SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
+ALLD Y K G + A F + +R++V+W A+I Q+G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 460 ATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASM 519
+ F MV G +P+S +L ++LS S + G Q S + ++ A +
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA-L 454
Query: 520 VDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR- 578
+ + ++G A + + E D + W+S+I + H + E A + + + ME LR
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRP 513
Query: 579 DAAPYVAMSNIYAVAG 594
D YV + + AG
Sbjct: 514 DHITYVGVFSACTHAG 529
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 229/533 (42%), Gaps = 88/533 (16%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M ++ S N +I+ +++ G + A F M +R V+W +I G++Q+ A +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV----- 115
M D PD T A++LS C+ + Q+H+ I+ G++ I+ N+L+
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 116 ----------------------------DSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
D Y K+ ++ A+ +F + +D V++ A+I
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
G+ + G EAI LF M G +P+ +T AA LS LA ++ G+Q+H VK+ +
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVMITCYAWNEQYKESLKLFREL 266
+V V+NAL+ +Y+K + A + F + E D VS+ MI A + +E+L+LF +
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
+ + S + + GRQ DM
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQ-------------------YFDM------M 541
Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
++ +I LSH + M+ + + G L+EA FIE + I D T+ S+L A
Sbjct: 542 KDVDKIIPTLSH-----YACMVDLFGRAGLLQEAQE-FIE--KMPIEPDVVTWGSLLSAC 593
Query: 387 AELASLSLGKQLHSFVIRSGFMSNVFSG--SALLDMYAKSGSLKDAIQTFKEMPERNI-- 442
++ LGK ++ + SG SAL ++Y+ G ++A + K M + +
Sbjct: 594 RVHKNIDLGKVAAERLL---LLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKK 650
Query: 443 ---VSWNALISAC----------AQNGDAQATLKSFEDMVQS-GYQPDSVSLL 481
SW + + + T+K D ++ GY PD+ S+L
Sbjct: 651 EQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 106/217 (48%), Gaps = 12/217 (5%)
Query: 398 LHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGD 457
+H VI+SG M +V+ + L+++Y+K+G A + F EMP R SWN ++SA ++ GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 458 AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA 517
+T + F+ + Q DSVS +++ + G + ++ M K + P +
Sbjct: 96 MDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRVMGDMV-KEGIEPTQFTLT 150
Query: 518 SMVDILCRSGCFDEAEKL---MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKM 574
+++ + + C + +K+ + ++ + + +S++N + AK D++
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV-- 208
Query: 575 EKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
+RD + + AM ++ GQ + + M ER +
Sbjct: 209 --VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/759 (35%), Positives = 437/759 (57%), Gaps = 18/759 (2%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMV---DRTAVSWTILIGGYSQKNQFREAFKLFV 61
++V N LIS Y KSG+ A A ++F +M R VSW+ ++ Y + +A K+FV
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 62 DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCK 120
+ G DY + ++ CS D ++K G + S + + SL+D + K
Sbjct: 156 EFLELGLVPNDYC-YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 121 IR-CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
+ A +VF +M + + V++ +IT + G EAI+ F++M GF+ FT ++
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMP 236
SA L +++LG+Q+H++ +++ V++V +L+D+Y+K V + RK+F M
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 237 EVDGVSYNVMITCYAWN-EQYKESLKLFREL-QFTRFDRSQFPFSTLLSVVANKLDLQIG 294
+ +S+ +IT Y N E++ LF E+ + + F FS+ N D ++G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
+Q+ Q S VANS++ M+ K R E+A+ F +LS + V + + +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
N E+A L E+ + TFAS+L A + S+ G+Q+HS V++ G N
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
+AL+ MY+K GS+ A + F M RN++SW ++I+ A++G A L++F M++ G +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
P+ V+ +++LSACSH GL+ EG ++FNSM + +K++PK EHYA MVD+LCR+G +A +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAG 594
+ MPF+ D ++W + + +CR+H N E K AA ++ +++ + A Y+ +SNIYA AG
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP-NEPAAYIQLSNIYACAG 691
Query: 595 QWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMK 654
+WE +++++ M+ER + K SW+E+ K+H F D HP ++I +++ L+ E+K
Sbjct: 692 KWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Query: 655 KEGYKPDTSCALHD----EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
+ GY PDT LH DE K L HSE++A+AF LI+T + P+ V KNLR C
Sbjct: 752 RCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCG 811
Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
DCH A+K IS ++GREI +RD +RFHHFKDG CSC D+W
Sbjct: 812 DCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 280/548 (51%), Gaps = 18/548 (3%)
Query: 63 MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
M DG D VTF++LL C VHA +I+F ++ NSL+ Y K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 123 CLDLARRVFKEM---PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
A VF+ M ++D VS++A++ + G +AIK+FVE LG P+D+ + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 180 ALSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVE-ARKLFGEMPE 237
+ A + +GR F++KT +F +V V +L+D++ K + E A K+F +M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI 297
++ V++ +MIT +E+++ F ++ + F+ +F S++ S A +L +G+Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 298 HTQTIVTTAISEVKVANSLVDMYAKC---GRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
H+ I + + +V+ SLVDMYAKC G ++ +++F + S + WTA+I+ Y++
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 355 GNL-EEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
NL EA+NLF EM + ++ + TF+S +A L+ +GKQ+ + G SN
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
++++ M+ KS ++DA + F+ + E+N+VS+N + +N + + K ++ +
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
+ + S+LS ++ G I +G Q +S K L + +++ + + G D A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIH----KNLEFAKKAADQLFKMEKLRDAAPYVAMSN 588
++ M + I W+S+I H + LE + ++ K ++ A A S+
Sbjct: 529 SRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 589 IYAVAGQW 596
+ V+ W
Sbjct: 588 VGLVSEGW 595
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 163/644 (25%), Positives = 291/644 (45%), Gaps = 107/644 (16%)
Query: 165 MQHLGFKPSD-FTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHD 223
M G +P D TF++ L + + D LG+ VHA +++ + + + N+L+ LYSK
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 224 CVVEARKLFGEMPEV---DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFST 280
+A +F M D VS++ M+ CY N + +++K+F E + + ++
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKC-GRFEEAKEIFANLSH 338
++ +N + +GR + T S+V V SL+DM+ K FE A ++F +S
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
++ V WT MI+ +Q G EA+ F++M + +D+ T +S+ A AEL +LSLGKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 399 HSFVIRSGFMSNVFSGSALLDMYAK---SGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
HS+ IRSG + +V +L+DMYAK GS+ D + F M + +++SW ALI+ +N
Sbjct: 292 HSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 456 GD-AQATLKSFEDMVQSGY-QPDSVSLLSVLSACSHC----------------GL----- 492
+ A + F +M+ G+ +P+ + S AC + GL
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 493 --------------IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQ 538
+E+ + F S+++K + Y + +D CR+ F++A KL+++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVS-----YNTFLDGTCRNLNFEQAFKLLSE 464
Query: 539 MP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
+ ++S+++ ++ ++ Q+ K+ + A+ ++Y+ G
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 596 WESVSQVKKAMRERGVRKVTAYSWVELKSKV--HVFTANDELHPQTNEIRRKIENLMQEM 653
++ S+V M R V SW + + H F R +E Q M
Sbjct: 525 IDTASRVFNFMENRNV-----ISWTSMITGFAKHGFAI------------RVLETFNQ-M 566
Query: 654 KKEGYKPD--------TSCALHD-------------EDEEIKVESLKY--------HSER 684
+EG KP+ ++C+ ED +IK + Y +
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 685 LAIAFALINT-PEGSPILVMKNLRACTDCHAAIKLISKITGREI 727
L AF INT P + +LV + H+ +L K+ R+I
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL-GKLAARKI 669
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 186/444 (41%), Gaps = 66/444 (14%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M + + +S LI+GY+K+ NLAT EA LF
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLAT------------------------------EAINLF 360
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
+M T G +P++ TF++ C QV K G S + NS++ + K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
++ A+R F+ + +K+ VS+N + G + E+A KL E+ S FTFA+
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
LS + I G Q+H+ VVK N V NAL+ +YSK + A ++F M +
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG-RQIHT 299
+S+ MIT +A + L+ F ++ ++ + +LS ++ + G R ++
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
+++ +VD+ + G +A E I+T+P+ A + +
Sbjct: 601 MYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF------INTMPFQADVLVW-------- 646
Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
F+ CR + + + A+ R EL + L +
Sbjct: 647 --RTFLGACRVHSNTELGKLAA--RKILELDPNEPAAYIQ-----------------LSN 685
Query: 420 MYAKSGSLKDAIQTFKEMPERNIV 443
+YA +G +++ + ++M ERN+V
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLV 709
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 121/263 (46%), Gaps = 9/263 (3%)
Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRS 405
+I ++ G+L A++ M R I D TF+S+L++ LGK +H+ +I
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 406 GFMSNVFSGSALLDMYAKSGS---LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATL 462
+ ++L+ +Y+KSG +D +T + +R++VSW+A+++ NG +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 463 KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDI 522
K F + ++ G P+ +V+ ACS+ + G + + S++D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 523 LCRS-GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAA 581
+ F+ A K+ +M E + + W+ +I C + F ++A M +
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFES 267
Query: 582 PYVAMSNIYAVAGQWESVSQVKK 604
+S++++ + E++S K+
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQ 290
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 33/251 (13%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDR----TAVSWTILIGGYSQKNQFREA 56
M N+N +S +I+G+ K G E FN M++ V++ ++ S E
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 57 FKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQV---HADIIKFGYNSILII 110
++ F M D P Y LL A E I AD++ + + L
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV--WRTFLGA 652
Query: 111 CNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGF 170
C V S ++ LA R E+ + ++ L +A G EE+ ++ +M+
Sbjct: 653 CR--VHSNTELG--KLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN- 707
Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
L G + I +G ++H F V N +Y + D ++ K
Sbjct: 708 ----------LVKEGGCSWIEVGDKIHKFYVGDTAHPNAH------QIYDELDRLITEIK 751
Query: 231 LFGEMPEVDGV 241
G +P+ D V
Sbjct: 752 RCGYVPDTDLV 762
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/738 (35%), Positives = 421/738 (57%), Gaps = 9/738 (1%)
Query: 16 YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
Y G+L A +F+ + A+ W IL+ ++ F + LF M + G + D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYT 197
Query: 76 FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
F+ + S + + Q+H I+K G+ + NSLV Y K + +D AR+VF EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD---IAL 192
++D +S+N++I G+ GL E+ + +FV+M G + A +S G AD I+L
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISL 314
Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
GR VH+ VK F N LLD+YSK + A+ +F EM + VSY MI YA
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
E++KLF E++ + + +L+ A L G+++H ++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF-IEMCRAN 371
+N+L+DMYAKCG +EA+ +F+ + + W +I Y + EAL+LF + +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
S D+ T A +L A A L++ G+++H +++R+G+ S+ ++L+DMYAK G+L A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
F ++ +++VSW +I+ +G + + F M Q+G + D +S +S+L ACSH G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
L++EG ++FN M + K+ P EHYA +VD+L R+G +A + + MP PD +W ++
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
+ CRIH +++ A+K A+++F++E + YV M+NIYA A +WE V +++K + +RG+
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEP-ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDE 671
RK SW+E+K +V++F A D +P+T I + + M +EGY P T AL D +E
Sbjct: 734 RKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEE 793
Query: 672 EIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRD 731
K E+L HSE+LA+A +I++ G I V KNLR C DCH K +SK+T REI +RD
Sbjct: 794 MEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRD 853
Query: 732 SSRFHHFKDGFCSCRDFW 749
S+RFH FKDG CSCR FW
Sbjct: 854 SNRFHQFKDGHCSCRGFW 871
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 279/580 (48%), Gaps = 29/580 (5%)
Query: 1 MPNQNTVSTNMLISGYV--KSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREA 56
+ NQ + + + + YV +L T + +S+ DR+ + + + A
Sbjct: 21 LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENA 80
Query: 57 FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
KL G D D T ++L C++ + + +V I G+ + + L
Sbjct: 81 VKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL 137
Query: 117 SYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
Y L A RVF E+ + ++ +N L+ AK G +I LF +M G + +T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
F+ + L + G Q+H F++K+ F E V N+L+ Y K+ V ARK+F EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD---LQI 293
E D +S+N +I Y N ++ L +F ++ + + +T++SV A D + +
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI---EIDLATIVSVFAGCADSRLISL 314
Query: 294 GRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQ 353
GR +H+ + E + N+L+DMY+KCG + AK +F +S S V +T+MI+ Y +
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 354 KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS 413
+G EA+ LF EM IS D T ++L A L GK++H ++ + ++F
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG- 472
+AL+DMYAK GS+++A F EM ++I+SWN +I ++N A L F +++
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA-SMVDILCRSGCFDE 531
+ PD ++ VL AC+ ++G + + + + H A S+VD+ + G
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGAL-- 550
Query: 532 AEKLMAQMPFE----PDEIMWSSVINSCRIHKNLEFAKKA 567
L+A M F+ D + W+ +I +H F K+A
Sbjct: 551 ---LLAHMLFDDIASKDLVSWTVMIAGYGMHG---FGKEA 584
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%)
Query: 9 TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
+N L+ Y K G++ A +F+ M + +SW +IGGYS+ EA LF + +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 69 SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
PD T A +L C+ ++ ++H I++ GY S + NSLVD Y K L LA
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
+F ++ KD VS+ +I G+ G +EAI LF +M+ G + + +F + L A
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/733 (36%), Positives = 414/733 (56%), Gaps = 9/733 (1%)
Query: 20 GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
G + AR++F S+ + +L+ G+S + +F +R P+ T+A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 80 LSGCS--EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQK 137
+S S D A +I H + G +S L++ +++V Y K ++ AR+VF MP+K
Sbjct: 126 ISAASGFRDDRAGRVI--HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 138 DSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT-FAAALSAGVGLADIALGRQV 196
D++ +N +I+G+ K + E+I++F ++ + D T L A L ++ LG Q+
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 197 HAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQY 256
H+ KT + +V + LYSK + LF E + D V+YN MI Y N +
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303
Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
+ SL LF+EL + ++ STL+S+V L + IH + + +S V+ +L
Sbjct: 304 ELSLSLFKELMLSG---ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTAL 360
Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
+Y+K E A+++F S W AMIS Y Q G E+A++LF EM ++ S +
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
T IL A A+L +LSLGK +H V + F S+++ +AL+ MYAK GS+ +A + F
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
M ++N V+WN +IS +G Q L F +M+ SG P V+ L VL ACSH GL++EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
+ FNSM +Y P +HYA MVDIL R+G A + + M EP +W +++ +CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
IHK+ A+ +++LF+++ + +V +SNI++ + + V++ ++R + K
Sbjct: 601 IHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
Y+ +E+ HVFT+ D+ HPQ EI K+E L +M++ GY+P+T ALHD +EE +
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719
Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
+K HSERLAIAF LI T G+ I ++KNLR C DCH KLISKIT R I VRD++RFH
Sbjct: 720 MVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 779
Query: 737 HFKDGFCSCRDFW 749
HFKDG CSC D+W
Sbjct: 780 HFKDGVCSCGDYW 792
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 233/473 (49%), Gaps = 11/473 (2%)
Query: 90 NELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGF 149
+ L Q HA II G+ + + + L + + AR +F + + D FN L+ GF
Sbjct: 34 SHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 150 AKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVEN 208
+ ++ +F ++ KP+ T+A A+SA G D GR +H V
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL-- 266
+ + + ++ +Y K V +ARK+F MPE D + +N MI+ Y NE Y ES+++FR+L
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 267 -QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
TR D + +L VA +L++G QIH+ T S V + +Y+KCG+
Sbjct: 214 ESCTRLDTTT--LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
+ +F V + AMI Y G E +L+LF E+ + +T S++
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
S L L +H + ++S F+S+ +AL +Y+K ++ A + F E PE+++ SW
Sbjct: 332 SGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
NA+IS QNG + + F +M +S + P+ V++ +LSAC+ G + G ++ + + +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVR 447
Query: 506 KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIH 558
+++ + + G EA +L M + +E+ W+++I+ +H
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 7/476 (1%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
++ Y K + AR++F+ M ++ + W +I GY + + E+ ++F D+ + +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D T +L +E +Q+H+ K G S + + Y K + + +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
+E + D V++NA+I G+ G E ++ LF E+ G + T + + +
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLM 336
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
L +H + +K+NF+ + V+ AL +YSK + + ARKLF E PE S+N MI+ Y
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
N ++++ LFRE+Q + F + + +LS A L +G+ +H T S +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
V+ +L+ MYAKCG EA+ +F ++ + V W MIS Y G +EALN+F EM +
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 372 ISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
I+ TF +L A + + G ++ +S + R GF +V + ++D+ ++G L+ A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLS 485
+Q + M E W L+ AC + D E + + PD+V +LS
Sbjct: 577 LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/760 (34%), Positives = 415/760 (54%), Gaps = 110/760 (14%)
Query: 95 VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQ------------------ 136
VH +II FG+ I N L+D YCK L+ AR++F E+ +
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 137 ---------------KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
+D+V +NA+ITGF+ AI LF +M+H GFKP +FTFA+ L
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 182 SAGVGLADIALGR----QVHAFVVKTNFVENVFVANALLDLYSK----HDCVVEARKLFG 233
+ GLA +A Q HA +K+ V+NAL+ +YSK + ARK+F
Sbjct: 156 A---GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 234 EMPEVDG--------------------------------VSYNVMITCYAWNEQYKESLK 261
E+ E D V+YN MI+ Y Y+E+L+
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYA 321
+ R + + + +F + +++ A LQ+G+Q+H + S NSLV +Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYY 331
Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL------------------------ 357
KCG+F+EA+ IF + V W A++S YV G++
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 358 -------EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
EE L LF M R F+ +++ A L + G+Q H+ +++ GF S+
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
+ +G+AL+ MYAK G +++A Q F+ MP + VSWNALI+A Q+G + +E+M++
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
G +PD ++LL+VL+ACSH GL+++G +YF+SM Y++ P +HYA ++D+LCRSG F
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
+AE ++ +PF+P +W ++++ CR+H N+E AAD+LF + D Y+ +SN++
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT-YMLLSNMH 630
Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
A GQWE V++V+K MR+RGV+K A SW+E++++VH F +D HP+ + +++L
Sbjct: 631 AATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLG 690
Query: 651 QEMKKEGYKPDTSCALHD-EDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
+EM++ GY PDTS LHD E + K + L HSE++A+AF L+ P G+ I + KNLR C
Sbjct: 691 KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750
Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
DCH + +S + R+I +RD RFHHF++G CSC +FW
Sbjct: 751 GDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 238/527 (45%), Gaps = 74/527 (14%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNS--MVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
+ ++ ++SGY SG++ AR +F + R V + +I G+S N A LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 63 MRTDGGSDPDYVTFATLLSGCS-EPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
M+ +G PD TFA++L+G + D + +Q HA +K G I + N+LV Y K
Sbjct: 139 MKHEG-FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 122 ----RCLDLARRVFKEMPQKDS--------------------------------VSFNAL 145
L AR+VF E+ +KD V++NA+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
I+G+ G +EA+++ M G + +FT+ + + A + LG+QVHA+V++
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN--------------------- 244
F N+L+ LY K EAR +F +MP D VS+N
Sbjct: 318 FSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 245 ----------VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG 294
+MI+ A N +E LKLF ++ F+ + FS + A G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
+Q H Q + S + N+L+ MYAKCG EEA+++F + + +V W A+I+A Q
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFS 413
G+ EA++++ EM + I D+ T ++L A + + G++ S
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 414 GSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISACAQNGDAQ 459
+ L+D+ +SG DA + +P + W AL+S C +G+ +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 204/486 (41%), Gaps = 106/486 (21%)
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS------- 242
+ L R VH ++ F + N L+D+Y K + AR+LF E+ E D ++
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 243 --------------------------YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQF 276
YN MIT ++ N ++ LF +++ F F
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 277 PFSTL---LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKC---------- 323
F+++ L++VA+ D + Q H + + A V+N+LV +Y+KC
Sbjct: 150 TFASVLAGLALVAD--DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 324 -------------------------GRFEEAKEIFANL-SHISTVPWTAMISAYVQKGNL 357
G F+ +E+ + ++ V + AMIS YV +G
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS-------- 409
+EAL + M + I D+ T+ S++RA A L LGKQ+H++V+R S
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLV 327
Query: 410 ----------------------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
++ S +ALL Y SG + +A FKEM E+NI+SW
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387
Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
+IS A+NG + LK F M + G++P + + +C+ G G QY ++ K
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKI 446
Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
+++ + + G +EA ++ MP D + W+++I + H + A
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDV 505
Query: 568 ADQLFK 573
+++ K
Sbjct: 506 YEEMLK 511
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 40/307 (13%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++ VS N L+SGYV SG++ A+ +F M ++ +SW I+I G ++ E KLF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M+ +G DY F+ + C+ Q HA ++K G++S L N+L+ Y K
Sbjct: 406 SCMKREGFEPCDY-AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
++ AR+VF+ MP DSVS+NALI + G EA+ ++ EM G +P T
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 181 LSA--GVGLAD--------------IALGRQVHAFVV-------KTNFVENVF------- 210
L+A GL D I G +A ++ K + E+V
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 211 ---VANALLDLYSKHD----CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
+ ALL H ++ A KLFG +PE DG +Y ++ +A Q++E ++
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG-TYMLLSNMHAATGQWEEVARV- 642
Query: 264 RELQFTR 270
R+L R
Sbjct: 643 RKLMRDR 649
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 138/348 (39%), Gaps = 83/348 (23%)
Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
L + + LQ+ R +H I + N L+D+Y K A+++F +S
Sbjct: 21 LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK 80
Query: 342 VPWTAMISAYVQKGNLE---------------------------------EALNLFIEMC 368
+ T M+S Y G++ A+NLF +M
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 369 RANISADQATFASILRASAELA-SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS- 426
D TFAS+L A +A Q H+ ++SG +AL+ +Y+K S
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 427 ---LKDAIQTFKEMPERN--------------------------------IVSWNALISA 451
L A + F E+ E++ +V++NA+IS
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 452 CAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRP 511
G Q L+ MV SG + D + SV+ AC+ GL++ G Q Y LR
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ-----VHAYVLR- 314
Query: 512 KKEHYA-----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
+E ++ S+V + + G FDEA + +MP + D + W+++++
Sbjct: 315 -REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 114/321 (35%), Gaps = 84/321 (26%)
Query: 379 FASILRASAEL--ASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
+A+ LR L SL L + +H +I GF + L+D+Y KS L A Q F E
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 437 MPE---------------------------------RNIVSWNALISACAQNGDAQATLK 463
+ E R+ V +NA+I+ + N D + +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 464 SFEDMVQSGYQPDSVSLLSVLSACS------------HCGLIEEGLQYFNSMTQ------ 505
F M G++PD+ + SVL+ + H ++ G Y S++
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 506 -KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFA 564
K P H A V FDE E DE W++++ + +
Sbjct: 195 SKCASSPSLLHSARKV--------FDEI--------LEKDERSWTTMMTGYVKNGYFDLG 238
Query: 565 KKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG-----------VRK 613
++ + + KL Y AM + Y G ++ ++ + M G +R
Sbjct: 239 EELLEGMDDNMKL---VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 614 VTAYSWVELKSKVHVFTANDE 634
++L +VH + E
Sbjct: 296 CATAGLLQLGKQVHAYVLRRE 316
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/640 (37%), Positives = 386/640 (60%), Gaps = 4/640 (0%)
Query: 112 NSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG-F 170
NSL++ Y K R AR++F MP+++ VS+ A++ G+ G + E +KLF M G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 171 KPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARK 230
+P++F + I G+Q H +K + + FV N L+ +YS EA +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 231 LFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLD 290
+ ++P D ++ ++ Y +KE L + R+ F + + + L + +N D
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 291 LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISA 350
L + Q+H++ + +EV+ +L++MY KCG+ A+ +F + + T ++ A
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 351 YVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSN 410
Y Q + EEALNLF +M + ++ TFA +L + AEL+ L G LH V++SG+ ++
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 411 VFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ 470
V G+AL++MYAKSGS++DA + F M R+IV+WN +IS C+ +G + L++F+ M+
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 471 SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFD 530
+G P+ ++ + VL ACSH G +E+GL YFN + +K+ ++P +HY +V +L ++G F
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFK 492
Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKL-RDAAPYVAMSNI 589
+AE M P E D + W +++N+C + +N KK A+ + +EK D+ YV +SNI
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--YAIEKYPNDSGVYVLLSNI 550
Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
+A + +WE V++V+ M RGV+K SW+ ++++ HVF A D HP+ I K++ +
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
M ++K GY PD + A HD DEE + ++L YHSE+LA+A+ LI TPE SP+ V KN+R C
Sbjct: 611 MSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRIC 670
Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
DCH+AIKLISKI+ R I +RDS+RFHHF DG CSC D+W
Sbjct: 671 DDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 217/453 (47%), Gaps = 6/453 (1%)
Query: 4 QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
++ N LI+ YVK AR+LF+ M +R VSW ++ GY E KLF M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 64 RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
G S P+ + CS E Q H +K+G S + N+LV Y
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG 186
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
A RV ++P D F++ ++G+ + G +E + + + + F ++ T+ ++L
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
L D+ L QVH+ +V+ F V AL+++Y K V+ A+++F + +
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
++ Y ++ ++E+L LF ++ +++ F+ LL+ +A L+ G +H +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
+ + V V N+LV+MYAK G E+A++ F+ ++ V W MIS G EAL
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEA 426
Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSF---VIRSGFMSNVFSGSALLDM 420
F M ++ TF +L+A + + + G LH F + + ++ + ++ +
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQG--LHYFNQLMKKFDVQPDIQHYTCIVGL 484
Query: 421 YAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
+K+G KDA + P E ++V+W L++AC
Sbjct: 485 LSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 273 RSQFP---FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA---NSLVDMYAKCGRF 326
++ FP + LL V AN L+IG IH IVT S + A NSL+++Y KC
Sbjct: 26 KTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRET 85
Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL-RA 385
A+++F + + V W AM+ Y G E L LF M + S A+++ ++
Sbjct: 86 VRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKS 145
Query: 386 SAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSW 445
+ + GKQ H ++ G +S+ F + L+ MY+ +AI+ ++P ++ +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 446 NALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQ 505
++ +S + G + L + ++++ LS L S+ + LQ + M
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV- 264
Query: 506 KYKLRPKKEHYASMVDILCRSG 527
++ + E +++++ + G
Sbjct: 265 RFGFNAEVEACGALINMYGKCG 286
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 382 ILRASAELASLSLGKQLHSFVI---RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP 438
+L+ A + L +G+ +H+ +I +S + + ++L+++Y K A + F MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 439 ERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSACSHCGLIEEGL 497
ERN+VSW A++ +G LK F+ M SG +P+ V +CS+ G IEEG
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS--- 554
Q F+ KY L + ++V + EA +++ +P+ D ++SS ++
Sbjct: 157 Q-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY-CDLSVFSSALSGYLE 214
Query: 555 CRIHK-NLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
C K L+ +K A++ F L + SN+
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/743 (35%), Positives = 425/743 (57%), Gaps = 7/743 (0%)
Query: 8 STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
+TN+L++ YVK+G A LF+ M +R VS+ L GY+ ++ L+ + +G
Sbjct: 86 ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
+V F + L D A +H+ I+K GY+S + +L+++Y +D A
Sbjct: 142 HELNPHV-FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
R VF+ + KD V + +++ + + G E+++KL M+ GF P+++TF AL A +GL
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
+ VH ++KT +V + V LL LY++ + +A K+F EMP+ D V ++ MI
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
+ N E++ LF ++ ++F S++L+ A +G Q+H +
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
++ V+N+L+D+YAKC + + A ++FA LS + V W +I Y G +A ++F E
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
R +S + TF+S L A A LAS+ LG Q+H I++ V ++L+DMYAK G +
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSAC 487
K A F EM ++ SWNALIS + +G + L+ + M +P+ ++ L VLS C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 488 SHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIM 547
S+ GLI++G + F SM + + + P EHY MV +L RSG D+A KL+ +P+EP ++
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 548 WSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMR 607
W +++++ N EFA+++A+++ K+ +D A YV +SN+YA A QW +V+ ++K+M+
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINP-KDEATYVLVSNMYAGAKQWANVASIRKSMK 679
Query: 608 ERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALH 667
E GV+K SW+E + VH F+ HP I +E L + + GY PD + L
Sbjct: 680 EMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLL 739
Query: 668 DEDEEIKVESLKYHSERLAIAFALINTPEG-SPILVMKNLRACTDCHAAIKLISKITGRE 726
D D+E K + L HSERLA+A+ L+ P + IL+MKNLR C+DCH+A+K+IS I R+
Sbjct: 740 DMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRD 799
Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
+ +RD +RFHHF G CSC D W
Sbjct: 800 LVIRDMNRFHHFHAGVCSCGDHW 822
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 240/511 (46%), Gaps = 10/511 (1%)
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D + +L C + + +H DI+K G L N L+++Y K A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
EMP++++VSF L G+A ++ I L+ + G + + F + L V L
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
+ +H+ +VK + N FV AL++ YS V AR +F + D V + +++CY
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
N +++SLKL ++ F + + F T L + +H Q + T + + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
V L+ +Y + G +A ++F + VPW+ MI+ + Q G EA++LFI M A
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
+ ++ T +SIL A LG+QLH V++ GF +++ +AL+D+YAK + A+
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
+ F E+ +N VSWN +I G+ F + +++ V+ S L AC+
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
++ G+Q + + K K S++D+ + G A+ + +M D W+++
Sbjct: 464 SMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNAL 521
Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAP 582
I+ H + A ++ + K RD P
Sbjct: 522 ISGYSTHG----LGRQALRILDIMKDRDCKP 548
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/793 (34%), Positives = 427/793 (53%), Gaps = 56/793 (7%)
Query: 9 TNMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
T+ LIS Y+ G L+ A L D W LI Y + LF M +
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 67 GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
+ PD TF + C E + HA + G+ S + + N+LV Y + R L
Sbjct: 122 SWT-PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALSAGV 185
AR+VF EM D VS+N++I +AK G + A+++F M + G +P + T L
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
L +LG+Q+H F V + ++N+FV N L+D+Y+K + EA +F M D VS+N
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA------------------- 286
M+ Y+ +++++++LF ++Q + +S +S A
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 287 ---NKLDL--------QIGRQIHTQTIVTTAI------------SEVKVANSLVDMYAKC 323
N++ L +G +H + I AI E V N L+DMYAKC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 324 GRFEEAKEIFANLS--HISTVPWTAMISAYVQKGNLEEALNLFIEM----CRANISADQA 377
+ + A+ +F +LS V WT MI Y Q G+ +AL L EM C+ +A
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA--F 478
Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGFMS-NVFSGSALLDMYAKSGSLKDAIQTFKE 436
T + L A A LA+L +GKQ+H++ +R+ + +F + L+DMYAK GS+ DA F
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
M +N V+W +L++ +G + L F++M + G++ D V+LL VL ACSH G+I++G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
++YFN M + + P EHYA +VD+L R+G + A +L+ +MP EP ++W + ++ CR
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
IH +E + AA+++ ++ D + Y +SN+YA AG+W+ V++++ MR +GV+K
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGS-YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
SWVE F D+ HP EI + + + MQ +K GY P+T ALHD D+E K +
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
L HSE+LA+A+ ++ TP+G+ I + KNLR C DCH A +S+I +I +RDSSRFH
Sbjct: 778 LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFH 837
Query: 737 HFKDGFCSCRDFW 749
HFK+G CSC+ +W
Sbjct: 838 HFKNGSCSCKGYW 850
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 248/541 (45%), Gaps = 61/541 (11%)
Query: 88 TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS--VSFNAL 145
T +++ +H ++ FG + L + + L+ +Y + CL A + + P D+ +N+L
Sbjct: 40 TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 146 ITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNF 205
I + G + + LF M L + P ++TF A ++ + G HA + T F
Sbjct: 99 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158
Query: 206 VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRE 265
+ NVFV NAL+ +YS+ + +ARK+F EM D VS+N +I YA + K +L++F
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 266 LQFTRFDRS-QFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
+ R +L A+ +G+Q+H + + I + V N LVDMYAKCG
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 325 RFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM----------------- 367
+EA +F+N+S V W AM++ Y Q G E+A+ LF +M
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 368 --------------CR----ANISADQATFASILRASAELASLSLGKQLHSFVI------ 403
CR + I ++ T S+L A + +L GK++H + I
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 404 -RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP--ERNIVSWNALISACAQNGDAQA 460
++G + L+DMYAK + A F + ER++V+W +I +Q+GDA
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 461 TLKSFEDMVQSGYQ--PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYA- 517
L+ +M + Q P++ ++ L AC+ + G Q Y LR ++
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ-----IHAYALRNQQNAVPL 513
Query: 518 ----SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFK 573
++D+ + G +A + M +E+ W+S++ +H E A D++ +
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 574 M 574
+
Sbjct: 573 I 573
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 248/543 (45%), Gaps = 72/543 (13%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N N L++ Y + +L+ AR++F+ M VSW +I Y++ + + A ++F M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
+ G PD +T +L C+ T + Q+H + + + N LVD Y K +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----------------- 167
D A VF M KD VS+NA++ G+++ G E+A++LF +MQ
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 168 ------------------LGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV-------K 202
G KP++ T + LS + + G+++H + + K
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 203 TNFVENVFVANALLDLYSKHDCVVEARKLFGEMP--EVDGVSYNVMITCYAWNEQYKESL 260
+ V N L+D+Y+K V AR +F + E D V++ VMI Y+ + ++L
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 261 KLFREL--QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS-EVKVANSLV 317
+L E+ + + + F S L A+ L+IG+QIH + + + V+N L+
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 318 DMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQA 377
DMYAKCG +A+ +F N+ + V WT++++ Y G EEAL +F EM R D
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 378 TFASILRASAELASLSLGKQLHSFVIRSGF-----MSNVFSGS-------ALLDMYAKSG 425
T +L A + HS +I G M VF S L+D+ ++G
Sbjct: 581 TLLVVLYACS-----------HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 426 SLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPD-SVSLLSV 483
L A++ +EMP E V W A +S C +G + + E + + D S +LLS
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 484 LSA 486
L A
Sbjct: 690 LYA 692
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 21/377 (5%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
M ++ VS N +++GY + G A LF M + V+W+ I GY+Q+ EA
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 57 FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF-------GYNSILI 109
+ M + G P+ VT ++LSGC+ ++H IK+ G+ +
Sbjct: 350 LGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 110 ICNSLVDSYCKIRCLDLARRVFKEMP--QKDSVSFNALITGFAKEGLNEEAIKLFVEM-- 165
+ N L+D Y K + +D AR +F + ++D V++ +I G+++ G +A++L EM
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT--NFVENVFVANALLDLYSKHD 223
+ +P+ FT + AL A LA + +G+Q+HA+ ++ N V +FV+N L+D+Y+K
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCG 527
Query: 224 CVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLS 283
+ +AR +F M + V++ ++T Y + +E+L +F E++ F +L
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 284 VVANKLDLQIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HIST 341
++ + G + + +S + LVD+ + GR A + +
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 342 VPWTAMISAYVQKGNLE 358
V W A +S G +E
Sbjct: 648 VVWVAFLSCCRIHGKVE 664
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 10/348 (2%)
Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANL--SHISTVPWTAMISAYV 352
+ IH Q +++ I + + + L+ Y G A + S W ++I +Y
Sbjct: 45 KLIH-QKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 353 QKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
G + L LF M + + D TF + +A E++S+ G+ H+ + +GF+SNVF
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163
Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS- 471
G+AL+ MY++ SL DA + F EM ++VSWN++I + A+ G + L+ F M
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDE 531
G +PD+++L++VL C+ G G Q + ++ +VD+ + G DE
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 532 AEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR-DAAPYVAMSNIY 590
A + + M + D + W++++ E A + +++ + EK++ D + A + Y
Sbjct: 283 ANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKM-QEEKIKMDVVTWSAAISGY 340
Query: 591 AVAGQWESVSQVKKAMRERGVR--KVTAYSWVELKSKVHVFTANDELH 636
A G V + M G++ +VT S + + V E+H
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/683 (38%), Positives = 397/683 (58%), Gaps = 19/683 (2%)
Query: 76 FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
F L S C A + F YN I V +Y K + +AR++F E+P
Sbjct: 49 FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI-------VKAYAKDSKIHIARQLFDEIP 101
Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
Q D+VS+N LI+G+A A+ LF M+ LGF+ FT + ++A D+ +Q
Sbjct: 102 QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQ 159
Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV-DGVSYNVMITCYAWNE 254
+H F V F V NA + YSK + EA +F M E+ D VS+N MI Y ++
Sbjct: 160 LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
Query: 255 QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVAN 314
+ ++L L++E+ F F F +++L+ + + L GRQ H + I V +
Sbjct: 220 EGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGS 279
Query: 315 SLVDMYAKCGRFE---EAKEIFANLSHISTVPWTAMISAYVQKGNL-EEALNLFIEMCRA 370
L+D Y+KCG + +++++F + V W MIS Y L EEA+ F +M R
Sbjct: 280 GLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI 339
Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFS-GSALLDMYAKSGSLKD 429
D +F + A + L+S S KQ+H I+S SN S +AL+ +Y KSG+L+D
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 430 AIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH 489
A F MPE N VS+N +I AQ+G L ++ M+ SG P+ ++ ++VLSAC+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Query: 490 CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS 549
CG ++EG +YFN+M + +K+ P+ EHY+ M+D+L R+G +EAE+ + MP++P + W+
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 550 SVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRER 609
+++ +CR HKN+ A++AA++L M+ L A PYV ++N+YA A +WE ++ V+K+MR +
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLA-ATPYVMLANMYADARKWEEMASVRKSMRGK 578
Query: 610 GVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDE 669
+RK SW+E+K K HVF A D HP E+ +E +M++MKK GY D A+ E
Sbjct: 579 RIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKE 638
Query: 670 DEEIKVES---LKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGRE 726
DE + + L +HSE+LA+AF L++T +G ++V+KNLR C DCH AIK +S + GRE
Sbjct: 639 DEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGRE 698
Query: 727 ITVRDSSRFHHFKDGFCSCRDFW 749
I VRD+ RFH FKDG CSC D+W
Sbjct: 699 IIVRDNLRFHCFKDGKCSCGDYW 721
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 232/460 (50%), Gaps = 13/460 (2%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N S N+++ Y K + AR+LF+ + VS+ LI GY+ + A LF MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
G + D T + L++ C D + + Q+H + G++S + N+ V Y K L
Sbjct: 133 KL-GFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 125 DLARRVFKEMPQ-KDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
A VF M + +D VS+N++I + + +A+ L+ EM GFK FT A+ L+A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSK---HDCVVEARKLFGEMPEVDG 240
L + GRQ H ++K F +N V + L+D YSK D + ++ K+F E+ D
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 241 VSYNVMITCYAWNEQY-KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
V +N MI+ Y+ NE+ +E++K FR++Q F + S +N +QIH
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 300 QTIVTTAIS-EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
I + S + V N+L+ +Y K G ++A+ +F + ++ V + MI Y Q G+
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--SNVFSGSA 416
EAL L+ M + I+ ++ TF ++L A A + G++ + ++ F S
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSC 488
Query: 417 LLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQN 455
++D+ ++G L++A + MP + V+W AL+ AC ++
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 184/401 (45%), Gaps = 38/401 (9%)
Query: 176 TFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEM 235
TF L V D+ G+ +HA VK+ + +++N ++LYSK + AR F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 236 PEVDGVSYNVMITCYAWNEQYKESLKLFRELQ--------------------------FT 269
E + SYNV++ YA + + + +LF E+ F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 270 R-----FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
R F+ F S L++ +++DL +Q+H ++ S V N+ V Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 325 RFEEAKEIFANLSHI-STVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
EA +F + + V W +MI AY Q +AL L+ EM D T AS+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSG---SLKDAIQTFKEMPER 440
A L L G+Q H +I++GF N GS L+D Y+K G + D+ + F+E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 441 NIVSWNALISACAQNGD-AQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQY 499
++V WN +IS + N + ++ +KSF M + G++PD S + V SACS+ + Q
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 500 FNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMP 540
+ + + +++ + +SG +A + +MP
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+P+ N LIS Y KSGNL AR +F+ M + AVS+ +I GY+Q EA L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 61 VDMRTDGGSDPDYVTFATLLSGCS---EPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
M D G P+ +TF +LS C+ + D E + K + C ++D
Sbjct: 436 QRM-LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC--MIDL 492
Query: 118 YCKIRCLDLARRVFKEMPQK-DSVSFNALITGFAKE---GLNEEAIKLFVEMQHLGFKP 172
+ L+ A R MP K SV++ AL+ K L E A + MQ L P
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/557 (40%), Positives = 363/557 (65%), Gaps = 2/557 (0%)
Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
GR VHA ++++ F ++ + N LL++Y+K + EARK+F +MP+ D V++ +I+ Y+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
+++ ++L F ++ + ++F S+++ A + G Q+H + S V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
++L+D+Y + G ++A+ +F L + V W A+I+ + ++ E+AL LF M R
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
++AS+ A + L GK +H+++I+SG F+G+ LLDMYAKSGS+ DA +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
F + +R++VSWN+L++A AQ+G + + FE+M + G +P+ +S LSVL+ACSH GL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
++EG Y+ M +K + P+ HY ++VD+L R+G + A + + +MP EP +W +++
Sbjct: 379 LDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
N+CR+HKN E AA+ +F+++ D P+V + NIYA G+W ++V+K M+E GV+
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDP-DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
K A SWVE+++ +H+F ANDE HPQ EI RK E ++ ++K+ GY PDTS + D++
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 556
Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
+ +L+YHSE++A+AFAL+NTP GS I + KN+R C DCH AIKL SK+ GREI VRD+
Sbjct: 557 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDT 616
Query: 733 SRFHHFKDGFCSCRDFW 749
+RFHHFKDG CSC+D+W
Sbjct: 617 NRFHHFKDGNCSCKDYW 633
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 210/388 (54%), Gaps = 7/388 (1%)
Query: 76 FATLLSGCSEPDTANELIQ---VHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
+ TLL C+ LIQ VHA I++ + +++ N+L++ Y K L+ AR+VF+
Sbjct: 63 YNTLLKKCT---VFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119
Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
+MPQ+D V++ LI+G+++ +A+ F +M G+ P++FT ++ + A
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
G Q+H F VK F NV V +ALLDLY+++ + +A+ +F + + VS+N +I +A
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
+++L+LF+ + F S F +++L ++ L+ G+ +H I +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
N+L+DMYAK G +A++IF L+ V W ++++AY Q G +EA+ F EM R I
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
++ +F S+L A + L G + + + G + + ++D+ ++G L A++
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 433 TFKEMP-ERNIVSWNALISACAQNGDAQ 459
+EMP E W AL++AC + + +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 2/356 (0%)
Query: 4 QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
+ V N L++ Y K G+L AR++F M R V+WT LI GYSQ ++ +A LF +
Sbjct: 93 HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL-LFFNQ 151
Query: 64 RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
G P+ T ++++ + Q+H +K G++S + + ++L+D Y +
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
+D A+ VF + ++ VS+NALI G A+ E+A++LF M GF+PS F++A+ A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
+ G+ VHA+++K+ F N LLD+Y+K + +ARK+F + + D VS+
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
N ++T YA + KE++ F E++ ++ F ++L+ ++ L G +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLE 358
+ E ++VD+ + G A + T W A+++A N E
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
I AD+ + ++L+ L G+ +H+ +++S F ++ G+ LL+MYAK GSL++A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSH-- 489
+ F++MP+R+ V+W LIS +Q+ L F M++ GY P+ +L SV+ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 490 ---CGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
CG + K ++++D+ R G D+A+ + + D +
Sbjct: 176 RGCCG------HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-V 228
Query: 547 MWSSVI 552
W+++I
Sbjct: 229 SWNALI 234
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/640 (38%), Positives = 376/640 (58%), Gaps = 37/640 (5%)
Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
F I + L EA++L + KP T+ + + G++VH +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
+ FV + + N LL +Y+K +V+ARK+F EMP D S+NVM+ YA +E+ K
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172
Query: 262 LFRELQ-------------FTRFDRSQ--FPFSTLLSVVANKLD---------------- 290
LF E+ + + D+ + +L+ V N
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 291 -LQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
++ G++IH + S+ + +SL+DMY KCG +EA+ IF + V WT+MI
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
Y + E +LF E+ + ++ TFA +L A A+L + LGKQ+H ++ R GF
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
F+ S+L+DMY K G+++ A P+ ++VSW +LI CAQNG LK F+ ++
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCF 529
+SG +PD V+ ++VLSAC+H GL+E+GL++F S+T+K++L +HY +VD+L RSG F
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 530 DEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
++ + ++++MP +P + +W+SV+ C + N++ A++AA +LFK+E + YV M+NI
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENPVTYVTMANI 531
Query: 590 YAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENL 649
YA AG+WE +++K M+E GV K SW E+K K HVF A D HP N+I + L
Sbjct: 532 YAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLREL 591
Query: 650 MQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRAC 709
++MK+EGY P TS LHD ++E K E+L YHSE+LA+AFA+++T EG+ I V KNLR+C
Sbjct: 592 RKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSC 651
Query: 710 TDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
DCH AIK IS IT R+ITVRDS+RFH F++G CSC D+W
Sbjct: 652 VDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 186/362 (51%), Gaps = 2/362 (0%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MPN++ S N++++GY + G L AR+LF+ M ++ + SWT ++ GY +K+Q EA L+
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M+ S P+ T + ++ + ++H I++ G +S ++ +SL+D Y K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
C+D AR +F ++ +KD VS+ ++I + K E LF E+ +P+++TFA
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
L+A L LG+QVH ++ + F F +++L+D+Y+K + A+ + P+ D
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
VS+ +I A N Q E+LK F L + F +LS + ++ G +
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 301 TIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
+S + LVD+ A+ GRFE+ K + + + S W +++ GN++
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505
Query: 359 EA 360
A
Sbjct: 506 LA 507
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 390/661 (59%), Gaps = 4/661 (0%)
Query: 91 ELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFA 150
+L Q+HA ++ G + L+ + + AR+VF ++P+ +NA+I G++
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 151 KEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVF 210
+ ++A+ ++ MQ P FTF L A GL+ + +GR VHA V + F +VF
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 211 VANALLDLYSKHDCVVEARKLFG--EMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
V N L+ LY+K + AR +F +PE VS+ +++ YA N + E+L++F +++
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
++L+ DL+ GR IH + E + SL MYAKCG+
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
AK +F + + + W AMIS Y + G EA+++F EM ++ D + S + A A+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
+ SL + ++ +V RS + +VF SAL+DM+AK GS++ A F +R++V W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
I +G A+ + + M + G P+ V+ L +L AC+H G++ EG +FN M +K
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HK 454
Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
+ P+++HYA ++D+L R+G D+A +++ MP +P +W +++++C+ H+++E + AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
QLF ++ + YV +SN+YA A W+ V++V+ M+E+G+ K SWVE++ ++
Sbjct: 515 QQLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
F D+ HP+ EI R++E + +K+ G+ + +LHD ++E E+L HSER+AIA
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633
Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
+ LI+TP+G+P+ + KNLRAC +CHAA KLISK+ REI VRD++RFHHFKDG CSC D+
Sbjct: 634 YGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Query: 749 W 749
W
Sbjct: 694 W 694
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 218/447 (48%), Gaps = 4/447 (0%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
LI G++ AR++F+ + W +I GYS+ N F++A ++ +M+ S P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-P 117
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D TF LL CS VHA + + G+++ + + N L+ Y K R L AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 132 K--EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
+ +P++ VS+ A+++ +A+ G EA+++F +M+ + KP + L+A L D
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
+ GR +HA VVK + +L +Y+K V A+ LF +M + + +N MI+
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
YA N +E++ +F E+ ++ +S A L+ R ++ + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
V ++++L+DM+AKCG E A+ +F V W+AMI Y G EA++L+ M R
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 370 ANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKD 429
+ + TF +L A + G + + + ++D+ ++G L
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 430 AIQTFKEMP-ERNIVSWNALISACAQN 455
A + K MP + + W AL+SAC ++
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 177/355 (49%), Gaps = 10/355 (2%)
Query: 10 NMLISGYVKSGNLATARELFNSMV--DRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
N LI+ Y K L +AR +F + +RT VSWT ++ Y+Q + EA ++F MR
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK-M 216
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYN---SILIICNSLVDSYCKIRCL 124
PD+V ++L+ + + +HA ++K G +LI N++ Y K +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQV 273
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
A+ +F +M + + +NA+I+G+AK G EAI +F EM + +P + +A+SA
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
+ + R ++ +V ++++ ++VF+++AL+D+++K V AR +F + D V ++
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
MI Y + + +E++ L+R ++ + F LL + ++ G +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
+ + ++D+ + G ++A E+ + W A++SA + ++E
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 9 TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
++ LI + K G++ AR +F+ +DR V W+ +I GY + REA L+ M GG
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GG 419
Query: 69 SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
P+ VTF LL C+ E + N ++D + LD A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 129 RVFKEMPQKDSVS-FNALITGFAKE 152
V K MP + V+ + AL++ K
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKH 504
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/758 (34%), Positives = 423/758 (55%), Gaps = 22/758 (2%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N L++ Y K G+ ++F+ + +R VSW LI ++ A + F M D
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENV 195
Query: 70 DPDYVTFATLLSGCSEPDTANELI---QVHADIIKFG-YNSILIICNSLVDSYCKIRCLD 125
+P T ++++ CS L+ QVHA ++ G NS +I N+LV Y K+ L
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLGKLA 253
Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
++ + +D V++N +++ + EA++ EM G +P +FT ++ L A
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 186 GLADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
L + G+++HA+ +K + EN FV +AL+D+Y V+ R++F M + +N
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 245 VMITCYAWNEQYKESLKLFRELQFTR-FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
MI Y+ NE KE+L LF ++ + + + ++ IH +
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
+ V N+L+DMY++ G+ + A IF + V W MI+ YV + E+AL L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 364 FIEM-----------CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
+M R ++ + T +IL + A L++L+ GK++H++ I++ ++V
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
GSAL+DMYAK G L+ + + F ++P++N+++WN +I A +G+ Q + M+ G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
+P+ V+ +SV +ACSH G+++EGL+ F M Y + P +HYA +VD+L R+G EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 533 EKLMAQMPFEPDEI-MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYA 591
+LM MP + ++ WSS++ + RIH NLE + AA L ++E A+ YV ++NIY+
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYS 732
Query: 592 VAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQ 651
AG W+ ++V++ M+E+GVRK SW+E +VH F A D HPQ+ ++ +E L +
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792
Query: 652 EMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
M+KEGY PDTSC LH+ +E+ K L HSE+LAIAF ++NT G+ I V KNLR C D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852
Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
CH A K ISKI REI +RD RFH FK+G CSC D+W
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 280/565 (49%), Gaps = 25/565 (4%)
Query: 35 RTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ 94
R+ W L+ + N REA +VDM G PD F LL ++ Q
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQ 118
Query: 95 VHADIIKFGYN-SILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
+HA + KFGY + + N+LV+ Y K +VF + +++ VS+N+LI+
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA---DIALGRQVHAFVVKTNFVENVF 210
E A++ F M +PS FT + ++A L + +G+QVHA+ ++ + N F
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSF 237
Query: 211 VANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR 270
+ N L+ +Y K + ++ L G D V++N +++ NEQ E+L+ RE+
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 271 FDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYAKCGRFEEA 329
+ +F S++L ++ L+ G+++H + ++ E V ++LVDMY C +
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 330 KEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAE 388
+ +F + W AMI+ Y Q + +EAL LFI M A + A+ T A ++ A
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
+ S + +H FV++ G + F + L+DMY++ G + A++ F +M +R++V+WN +
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 449 ISA---CAQNGDAQATLKSFEDM---VQSG-----YQPDSVSLLSVLSACSHCGLIEEGL 497
I+ + DA L +++ V G +P+S++L+++L +C+ + +G
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG- 536
Query: 498 QYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRI 557
+ ++ K L +++VD+ + GC + K+ Q+P + + I W+ +I + +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGM 595
Query: 558 HKNLEFAKKAADQLFKMEKLRDAAP 582
H N ++A D L +M ++ P
Sbjct: 596 HGN---GQEAID-LLRMMMVQGVKP 616
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 257/520 (49%), Gaps = 22/520 (4%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N+ N L++ Y K G LA+++ L S R V+W ++ Q Q EA + +M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRC 123
+G +PD T +++L CS + ++HA +K G + + ++LVD YC +
Sbjct: 295 LEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH-LGFKPSDFTFAAALS 182
+ RRVF M + +NA+I G+++ ++EA+ LF+ M+ G + T A +
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
A V + +H FVVK + FV N L+D+YS+ + A ++FG+M + D V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 243 YNVMITCYAWNEQYKESLKLFRELQ-----------FTRFDRSQFPFSTLLSVVANKLDL 291
+N MIT Y ++E ++++L L ++Q + T+L A L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
G++IH I ++V V ++LVDMYAKCG + ++++F + + + W +I AY
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
GN +EA++L M + ++ TF S+ A + + G ++ +V++ +
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP 652
Query: 412 FSG--SALLDMYAKSGSLKDAIQTFKEMPE--RNIVSWNALISACAQNGDAQATLKSFED 467
S + ++D+ ++G +K+A Q MP +W++L+ A + + + + ++
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 468 MVQSGYQPDSVSLLSVLSAC-SHCGLIEEGLQYFNSMTQK 506
++Q +P+ S +L+ S GL ++ + +M ++
Sbjct: 713 LIQ--LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 182/370 (49%), Gaps = 14/370 (3%)
Query: 3 NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
++N+ + L+ Y + + R +F+ M DR W +I GYSQ +EA LF+
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 63 MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIR 122
M G + T A ++ C + +H ++K G + + N+L+D Y ++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 123 CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHL-----------GFK 171
+D+A R+F +M +D V++N +ITG+ +E+A+ L +MQ+L K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 172 PSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
P+ T L + L+ +A G+++HA+ +K N +V V +AL+D+Y+K C+ +RK+
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
F ++P+ + +++NV+I Y + +E++ L R + ++ F ++ + ++ +
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 292 QIGRQIHTQTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLSHI--STVPWTAMI 348
G +I + + +VD+ + GR +EA ++ + W++++
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 349 SAYVQKGNLE 358
A NLE
Sbjct: 695 GASRIHNNLE 704
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 266 LQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGR 325
L FT S FPF + L L R H + T S + S V
Sbjct: 5 LAFTFSLPSIFPFPSQL--------LPFSRHKHPYLLRATPTSATEDVASAVS------- 49
Query: 326 FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRA 385
A IF + S S W ++ + V+ L EA+ +++M I D F ++L+A
Sbjct: 50 --GAPSIFISQSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 386 SAELASLSLGKQLHSFVIRSGF-MSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS 444
A+L + LGKQ+H+ V + G+ + +V + L+++Y K G + F + ERN VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
WN+LIS+ + L++F M+ +P S +L+SV++ACS+ + EGL
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLM-MGKQV 224
Query: 505 QKYKLRPKKEHYASMVDILC----RSGCFDEAEKLMAQMPFEPDEIMWSSVINS-CRIHK 559
Y LR K E + +++ L + G ++ L+ D + W++V++S C+ +
Sbjct: 225 HAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQ 282
Query: 560 NLE 562
LE
Sbjct: 283 LLE 285
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/660 (35%), Positives = 380/660 (57%), Gaps = 8/660 (1%)
Query: 95 VHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
VHA I+K + N L++ Y K+ + AR V + P ++ VS+ +LI+G A+ G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
A+ F EM+ G P+DFTF A A L G+Q+HA VK + +VFV
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFD- 272
+ D+Y K +ARKLF E+PE + ++N I+ + + +E+++ F ++F R D
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDG 205
Query: 273 -RSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKE 331
+ F L+ ++ L L +G Q+H + + ++V V N L+D Y KC + ++
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI 265
Query: 332 IFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELAS 391
IF + + V W ++++AYVQ E+A L++ + + +S+L A A +A
Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAG 325
Query: 392 LSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISA 451
L LG+ +H+ +++ +F GSAL+DMY K G ++D+ Q F EMPE+N+V+ N+LI
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 452 CAQNGDAQATLKSFEDMVQSGY--QPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKL 509
A G L FE+M G P+ ++ +S+LSACS G +E G++ F+SM Y +
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI 445
Query: 510 RPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAAD 569
P EHY+ +VD+L R+G + A + + +MP +P +W ++ N+CR+H + AA+
Sbjct: 446 EPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 570 QLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVF 629
LFK++ +D+ +V +SN +A AG+W + V++ ++ G++K YSW+ +K++VH F
Sbjct: 506 NLFKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAF 564
Query: 630 TANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAF 689
A D H EI+ + L EM+ GYKPD +L+D +EE K + +HSE+LA+AF
Sbjct: 565 QAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAF 624
Query: 690 ALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
L++ P PI + KNLR C DCH+ K +S REI VRD++RFH FKDG CSC+D+W
Sbjct: 625 GLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 228/465 (49%), Gaps = 5/465 (1%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N LI+ Y K + +AR + R VSWT LI G +Q F A F +MR +G
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
D+ TF + Q+HA +K G + + S D YCK R D AR+
Sbjct: 106 PNDF-TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
+F E+P+++ ++NA I+ +G EAI+ F+E + + P+ TF A L+A
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
+ LG Q+H V+++ F +V V N L+D Y K + + +F EM + VS+ ++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
Y N + +++ L+ + + S F S++LS A L++GR IH +
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 310 VKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCR 369
+ V ++LVDMY KCG E++++ F + + V ++I Y +G ++ AL LF EM
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 370 ANI--SADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
+ + TF S+L A + ++ G K S G S ++DM ++G
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 427 LKDAIQTFKEMPERNIVS-WNALISACAQNGDAQATLKSFEDMVQ 470
++ A + K+MP + +S W AL +AC +G Q L + E++ +
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 215/438 (49%), Gaps = 21/438 (4%)
Query: 181 LSAGVGLADIALGRQVHAFVVKT-NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
L + + + LGR VHA +VKT + F+AN L+++YSK D AR + P +
Sbjct: 13 LKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72
Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHT 299
VS+ +I+ A N + +L F E++ + F F VA+ G+QIH
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
+ I +V V S DMY K ++A+++F + + W A IS V G E
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLD 419
A+ FIE R + + TF + L A ++ L+LG QLH V+RSGF ++V + L+D
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 420 MYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG-DAQAT---LKSFEDMVQSGYQP 475
Y K ++ + F EM +N VSW +L++A QN D +A+ L+S +D+V++
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET---- 308
Query: 476 DSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKL 535
+ SVLSAC+ +E G + ++ K + +++VD+ + GC +++E+
Sbjct: 309 SDFMISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 536 MAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAP------YVAMSNI 589
+MP E + + +S+I ++ A LF+ R P +V++ +
Sbjct: 368 FDEMP-EKNLVTRNSLIGGYAHQGQVDMAL----ALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 590 YAVAGQWESVSQVKKAMR 607
+ AG E+ ++ +MR
Sbjct: 423 CSRAGAVENGMKIFDSMR 440
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 33/216 (15%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA------VSWTILIGGYSQKNQFR 54
MP +N V+ N LI GY G + A LF M R +++ L+ S+
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 55 EAFKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIIC 111
K+F MR+ G +P Y +L + A E I+ K + +
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK------KMPIQPTISVW 484
Query: 112 NSLVDSYCKIR-----CLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
+L ++ C++ L A +FK P KDS + L FA G EA + E++
Sbjct: 485 GALQNA-CRMHGKPQLGLLAAENLFKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVK 202
+G K G G + I + QVHAF K
Sbjct: 543 GVGIK-----------KGAGYSWITVKNQVHAFQAK 567
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/744 (33%), Positives = 422/744 (56%), Gaps = 6/744 (0%)
Query: 9 TNMLISGYVKSGNLATARELFNSMVDRT-AVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
N L+S Y K+ +L+ AR LF+ ++ AV W ++ YS + E +LF +M G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFG-YNSILIICNSLVDSYCKIRCLDL 126
+ P+ T + L+ C A ++HA ++K ++S L +CN+L+ Y + +
Sbjct: 280 PA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
A R+ ++M D V++N+LI G+ + + +EA++ F +M G K + + + ++A
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
L+++ G ++HA+V+K + N+ V N L+D+YSK + + F M + D +S+ +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTA 306
I YA N+ + E+L+LFR++ R + + ++L + + I ++IH I+
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH-ILRKG 517
Query: 307 ISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIE 366
+ + + N LVD+Y KC A +F ++ V WT+MIS+ GN EA+ LF
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 367 MCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGS 426
M +SAD IL A+A L++L+ G+++H +++R GF A++DMYA G
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 427 LKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSA 486
L+ A F + + ++ + ++I+A +G +A ++ F+ M PD +S L++L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
CSH GL++EG + M +Y+L P EHY +VD+L R+ C EA + + M EP
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
+W +++ +CR H E + AA +L ++E ++ V +SN++A G+W V +V+ M
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEP-KNPGNLVLVSNVFAEQGRWNDVEKVRAKM 816
Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCA 665
+ G+ K SW+E+ KVH FTA D+ HP++ EI K+ + +++++E GY DT
Sbjct: 817 KASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFV 876
Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
LH+ DE KV+ L HSER+AIA+ L+ TP+ + + + KNLR C DCH KL+SK+ R
Sbjct: 877 LHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRR 936
Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
+I +RD++RFHHF+ G CSC D W
Sbjct: 937 DIVMRDANRFHHFESGLCSCGDSW 960
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 256/499 (51%), Gaps = 28/499 (5%)
Query: 76 FATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
FA +L C + ++ Q+H+ I K F + + LV Y K LD A +VF EM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
P + + ++N +I + G A+ L+ M+ G +F A L A L DI G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLF-GEMPEVDGVSYNVMITCYAWN 253
++H+ +VK + F+ NAL+ +Y+K+D + AR+LF G + D V +N +++ Y+ +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 254 EQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI-VTTAISEVKV 312
+ E+L+LFRE+ T + + + L+ ++G++IH + +T SE+ V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
N+L+ MY +CG+ +A+ I +++ V W ++I YVQ +EAL F +M A
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
+D+ + SI+ AS L++L G +LH++VI+ G+ SN+ G+ L+DMY+K +
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS---- 488
F M +++++SW +I+ AQN L+ F D+ + + D + L S+L A S
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502
Query: 489 -------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
HC ++ +GL +++ Q +VD+ + A ++ +
Sbjct: 503 MLIVKEIHCHILRKGL--LDTVIQN-----------ELVDVYGKCRNMGYATRVFESIKG 549
Query: 542 EPDEIMWSSVINSCRIHKN 560
+ D + W+S+I+S ++ N
Sbjct: 550 K-DVVSWTSMISSSALNGN 567
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 172/335 (51%), Gaps = 11/335 (3%)
Query: 268 FTRFDRSQF-----PFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK-VANSLVDMYA 321
F R D S+ F+ +L + + + GRQ+H++ T E+ +A LV MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG 127
Query: 322 KCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFAS 381
KCG ++A+++F + + W MI AYV G AL L+ M + ++F +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER- 440
+L+A A+L + G +LHS +++ G+ S F +AL+ MYAK+ L A + F E+
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 441 NIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYF 500
+ V WN+++S+ + +G + TL+ F +M +G P+S +++S L+AC + G +
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
S+ + + +++ + R G +AE+++ QM D + W+S+I +N
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG--YVQN 364
Query: 561 LEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQ 595
L + K+A + M + V+M++I A +G+
Sbjct: 365 LMY-KEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 45/357 (12%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M +++ +S +I+GY ++ A ELF + +
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM----------------------- 483
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
+ D + ++L S + + ++H I++ G +I N LVD Y K
Sbjct: 484 ---------EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGK 533
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
R + A RVF+ + KD VS+ ++I+ A G EA++LF M G
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
LSA L+ + GR++H ++++ F +A A++D+Y+ + A+ +F +
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGR---QI 297
+ Y MI Y + K +++LF +++ F LL ++ L GR +I
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 298 HTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVP----WTAMISA 350
E V LVDM GR E F + + T P W A+++A
Sbjct: 714 MEHEYELEPWPEHYVC--LVDML---GRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/708 (36%), Positives = 394/708 (55%), Gaps = 20/708 (2%)
Query: 48 SQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGY-NS 106
S+ + EAF+ +M G S Y ++ L C E + + +H D ++ G N
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSY-SYQCLFEACRELRSLSHGRLLH-DRMRMGIENP 116
Query: 107 ILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQ 166
+++ N ++ YC+ R L+ A ++F EM + ++VS +I+ +A++G+ ++A+ LF M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 167 HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVV 226
G KP + L + V + GRQ+HA V++ N + ++++Y K +V
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 227 EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVA 286
A+++F +M V+ ++ Y + +++LKLF +L + F FS +L A
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 287 NKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTA 346
+ +L +G+QIH SEV V LVD Y KC FE A F + + V W+A
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 347 MISAYVQKGNLEEALNLFIEMCRANISA-DQATFASILRASAELASLSLGKQLHSFVIRS 405
+IS Y Q EEA+ F + N S + T+ SI +A + LA ++G Q+H+ I+
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
+ + + SAL+ MY+K G L DA + F+ M +IV+W A IS A G+A L+ F
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
E MV G +P+SV+ ++VL+ACSH GL+E+G ++M +KY + P +HY M+DI R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
SG DEA K M MPFEPD + W ++ C HKNLE + A ++L +++ D A YV
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDP-EDTAGYVL 595
Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
N+Y AG+WE +++ K M ER ++K + SW++ K K+H F D+ HPQT EI K
Sbjct: 596 PFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK 655
Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALI----NTPEGSPIL 701
++ M+ + ++ C + + E+ L HSERLAIAF LI N P +PI
Sbjct: 656 LKEFDGFMEGDMFQ----CNMTERREQ-----LLDHSERLAIAFGLISVHGNAP--APIK 704
Query: 702 VMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
V KNLRAC DCH K +S +TG EI +RDS RFHHFK+G CSC D+W
Sbjct: 705 VFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 228/455 (50%), Gaps = 4/455 (0%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+ N + + N ++ Y + +L A +LF+ M + AVS T +I Y+++ +A LF
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M G P + + TLL P + Q+HA +I+ G S I +V+ Y K
Sbjct: 173 SGMLASGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
L A+RVF +M K V+ L+ G+ + G +A+KLFV++ G + F F+
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
L A L ++ LG+Q+HA V K V V L+D Y K A + F E+ E +
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFD-RSQFPFSTLLSVVANKLDLQIGRQIHT 299
VS++ +I+ Y Q++E++K F+ L+ + F ++++ + D IG Q+H
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
I + I ++L+ MY+KCG ++A E+F ++ + V WTA IS + GN E
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 360 ALNLFIEMCRANISADQATFASILRASAELASLSLGKQ-LHSFVIRSGFMSNVFSGSALL 418
AL LF +M + + TF ++L A + + GK L + + + + ++
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Query: 419 DMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
D+YA+SG L +A++ K MP E + +SW +S C
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 182/357 (50%), Gaps = 4/357 (1%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
NT +++ YVK G L A+ +F+ M + V+ T L+ GY+Q + R+A KLFVD+
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
T+ G + D F+ +L C+ + N Q+HA + K G S + + LVD Y K
Sbjct: 278 TE-GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF 336
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKP-SDFTFAAALSA 183
+ A R F+E+ + + VS++A+I+G+ + EEA+K F ++ + FT+ + A
Sbjct: 337 ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQA 396
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
LAD +G QVHA +K + + + + +AL+ +YSK C+ +A ++F M D V++
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ-IHTQTI 302
I+ +A+ E+L+LF ++ + F +L+ ++ ++ G+ + T
Sbjct: 457 TAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516
Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLE 358
+ + ++D+YA+ G +EA + N+ + W +S NLE
Sbjct: 517 KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
N+ + + + + E+ + +E+ S + + L L GR +H + +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
V + N ++ MY +C E+A ++F +S ++ V T MISAY ++G L++A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
F M + + + ++L++ +L G+Q+H+ VIR+G SN + +++MY K
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
G L A + F +M + V+ L+ Q G A+ LK F D+V G + DS V
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
L AC+ + G Q ++ K L + +VD + F+ A + ++ EP
Sbjct: 292 LKACASLEELNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EP 349
Query: 544 DEIMWSSVINS 554
+++ WS++I+
Sbjct: 350 NDVSWSAIISG 360
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/746 (34%), Positives = 406/746 (54%), Gaps = 7/746 (0%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM---RTD 66
N L+S Y G + A +LF+ M +R VSW +I +S E+F L +M D
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 67 GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
G PD T T+L C+ VH +K + L++ N+L+D Y K C+
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG--FKPSDFTFAAALSAG 184
A+ +FK K+ VS+N ++ GF+ EG + +M G K + T A+
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
+ + +++H + +K FV N VANA + Y+K + A+++F + S+N
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
+I +A + + SL +++ + F +LLS + L++G+++H I
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
++ V S++ +Y CG + +F + S V W +I+ Y+Q G + AL +F
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
+M I + + A + L SL LG++ H++ ++ + F +L+DMYAK+
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
GS+ + + F + E++ SWNA+I +G A+ +K FE+M ++G+ PD ++ L VL
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMA-QMPFEP 543
+AC+H GLI EGL+Y + M + L+P +HYA ++D+L R+G D+A +++A +M E
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
D +W S+++SCRIH+NLE +K A +LF++E YV +SN+YA G+WE V +V+
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP-EKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
+ M E +RK SW+EL KV F + EI+ L ++ K GY+PDT
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
HD EE K+E L+ HSE+LA+ + LI T EG+ I V KNLR C DCH A KLISK+
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
REI VRD+ RFHHFK+G CSC D+W
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 274/582 (47%), Gaps = 12/582 (2%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+ N + + T +I+ Y G+ +R +F+++ + W +I YS+ + E + F
Sbjct: 116 LRNDDVLCTR-IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
++M + PD+ T+ ++ C+ + VH ++K G + + N+LV Y
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT 234
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQH----LGFKPSDFT 176
+ A ++F MP+++ VS+N++I F+ G +EE+ L EM F P T
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294
Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
L +I LG+ VH + VK + + + NAL+D+YSK C+ A+ +F
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTL--LSVVANKLDLQIG 294
+ VS+N M+ ++ + + R++ D + L + V ++ L
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 295 RQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
+++H ++ + VAN+ V YAKCG A+ +F + + W A+I + Q
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 355 GNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG 414
+ +L+ ++M + + D T S+L A ++L SL LGK++H F+IR+ ++F
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 415 SALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQ 474
++L +Y G L F M ++++VSWN +I+ QNG L F MV G Q
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 475 PDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEK 534
+S++ V ACS + G + ++ K+ L S++D+ ++G ++ K
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 535 LMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
+ + E W+++I IH AK+A +M++
Sbjct: 654 VFNGLK-EKSTASWNAMIMGYGIHG---LAKEAIKLFEEMQR 691
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 211/457 (46%), Gaps = 10/457 (2%)
Query: 3 NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
++ V N L+ Y K G + A+ +F ++ VSW ++GG+S + F +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 63 MRTDGGSD--PDYVTFATLLSGCSEPDTANELIQVHADIIK--FGYNSILIICNSLVDSY 118
M GG D D VT + C L ++H +K F YN ++ N+ V SY
Sbjct: 384 MLA-GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--LVANAFVASY 440
Query: 119 CKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFA 178
K L A+RVF + K S+NALI G A+ ++ ++M+ G P FT
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 179 AALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEV 238
+ LSA L + LG++VH F+++ ++FV ++L LY + + LF M +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 239 DGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
VS+N +IT Y N +L +FR++ + + L++GR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLE 358
+ + +A SL+DMYAK G ++ ++F L ST W AMI Y G +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 359 EALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSAL 417
EA+ LF EM R + D TF +L A + G + L G N+ + +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 418 LDMYAKSGSLKDAIQTF-KEMPERNIVS-WNALISAC 452
+DM ++G L A++ +EM E V W +L+S+C
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 777
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 4/357 (1%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N + N ++ Y K G+L+ A+ +F+ + +T SW LIGG++Q N R + + M+
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
G PD T +LLS CS+ + +VH II+ L + S++ Y L
Sbjct: 489 IS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
+ +F M K VS+N +ITG+ + G + A+ +F +M G + + A
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
L + LGR+ HA+ +K ++ F+A +L+D+Y+K+ + ++ K+F + E S+N
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
MI Y + KE++KLF E+Q T + F +L+ + + G + Q +
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 305 TAIS-EVKVANSLVDMYAKCGRFEEAKEIFA-NLSHISTVP-WTAMISAYVQKGNLE 358
+ +K ++DM + G+ ++A + A +S + V W +++S+ NLE
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 148/280 (52%), Gaps = 8/280 (2%)
Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKV-ANSLVDMYAKCGRFEEAKEIFANLSHI 339
LL + D+++GR+IH +T + V ++ MYA CG ++++ +F L
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 340 STVPWTAMISAYVQKGNLEEALNLFIEMCR-ANISADQATFASILRASAELASLSLGKQL 398
+ W A+IS+Y + +E L FIEM ++ D T+ +++A A ++ + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
H V+++G + +VF G+AL+ Y G + DA+Q F MPERN+VSWN++I + NG +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 459 QATLKSFEDMVQ----SGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKE 514
+ + +M++ + PD +L++VL C+ I G + + K +L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELV 328
Query: 515 HYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
+++D+ + GC A+ ++ +M + + W++++
Sbjct: 329 LNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGG 367
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/739 (33%), Positives = 425/739 (57%), Gaps = 7/739 (0%)
Query: 13 ISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPD 72
+ G+ S + A +LF+ M A W ++I G++ + EA + + M G D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKAD 129
Query: 73 YVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK 132
T+ ++ + + E ++HA +IK G+ S + +CNSL+ Y K+ C A +VF+
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 133 EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIAL 192
EMP++D VS+N++I+G+ G ++ LF EM GFKP F+ +AL A + +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 193 GRQVHAFVVKTNF-VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
G+++H V++ +V V ++LD+YSK+ V A ++F M + + V++NVMI CYA
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
N + ++ F+++ + + Q T ++++ L+ GR IH + + +
Sbjct: 310 RNGRVTDAFLCFQKM--SEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFLPHMV 366
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
+ +L+DMY +CG+ + A+ IF ++ + + W ++I+AYVQ G AL LF E+ ++
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
+ D T ASIL A AE SLS G+++H+++++S + SN ++L+ MYA G L+DA
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR 486
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
+ F + +++VSWN++I A A +G + ++ F +M+ S P+ + S+L+ACS G
Sbjct: 487 KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
+++EG +YF SM ++Y + P EHY M+D++ R+G F A++ + +MPF P +W S+
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606
Query: 552 INSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGV 611
+N+ R HK++ A+ AA+Q+FKME + YV + N+YA AG+WE V+++K M +G+
Sbjct: 607 LNASRNHKDITIAEFAAEQIFKMEH-DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Query: 612 RKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED- 670
+ ++ S VE K K HVFT D H TN+I ++ + + + +E L E
Sbjct: 666 SRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETL 725
Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
+ + S + HS RLA F LI+T G + V N R C CH ++ S++T REI V
Sbjct: 726 VKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVG 785
Query: 731 DSSRFHHFKDGFCSCRDFW 749
DS FHHF +G CSC ++W
Sbjct: 786 DSKIFHHFSNGRCSCGNYW 804
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/726 (33%), Positives = 386/726 (53%), Gaps = 71/726 (9%)
Query: 94 QVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEG 153
Q HA I+K G + I L+ SY C + A V + +P SF++LI K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 154 LNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVAN 213
L ++I +F M G P L+ +G+Q+H + + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 214 ALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA---------------------- 251
++ +Y + + +ARK+F M + D V+ + ++ YA
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 252 ----WNE---------QYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH 298
WN +KE++ +F+++ F Q S++L V + L +GR IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 299 TQTIVTTAISEVKVANSLVDMYAKCG----------RFE--------------------- 327
I + + V ++++DMY K G +FE
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 328 ---EAKEIFANLS-HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASIL 383
E E+F + ++ V WT++I+ Q G EAL LF EM A + + T S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 384 RASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
A +A+L G+ H F +R + NV GSAL+DMYAK G + + F MP +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 444 SWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSM 503
WN+L++ + +G A+ + FE ++++ +PD +S S+LSAC GL +EG +YF M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 504 TQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEF 563
+++Y ++P+ EHY+ MV++L R+G EA L+ +MPFEPD +W +++NSCR+ N++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 564 AKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELK 623
A+ AA++LF +E + YV +SNIYA G W V ++ M G++K SW+++K
Sbjct: 576 AEIAAEKLFHLEP-ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 624 SKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSE 683
++V+ A D+ HPQ ++I K++ + +EM+K G++P+ ALHD +E+ + + L HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 684 RLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFC 743
+LA+ F L+NTP+G+P+ V+KNLR C DCHA IK IS GREI +RD++RFHHFKDG C
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 744 SCRDFW 749
SC DFW
Sbjct: 755 SCGDFW 760
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 220/514 (42%), Gaps = 75/514 (14%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
LI+ Y A + S+ D T S++ LI ++ F ++ +F M + G P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIP 114
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D L C+E Q+H G + + S+ Y + + AR+VF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 132 KEMPQKDS-----------------------------------VSFNALITGFAKEGLNE 156
M KD VS+N +++GF + G ++
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 157 EAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD-IALGRQVHAFVVKTNFVENVFVANAL 215
EA+ +F ++ HLGF P T ++ L + VG ++ + +GR +H +V+K +++ V +A+
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPS-VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 216 LDLYSKH----------------------------------DCVVEARKLFGEMP-EVDG 240
+D+Y K D +E +LF E E++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
VS+ +I A N + E+L+LFRE+Q + ++L N L GR H
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
+ + V V ++L+DMYAKCGR ++ +F + + V W ++++ + G +E
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLD 419
+++F + R + D +F S+L A ++ G K G + S +++
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 420 MYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
+ ++G L++A KEMP E + W AL+++C
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 181/406 (44%), Gaps = 52/406 (12%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSM----VDRTAVSWTILIGGYSQKNQFREA 56
M +++ V+ + L+ Y + G L + + M ++ VSW ++ G+++ +EA
Sbjct: 177 MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Query: 57 FKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVD 116
+F + G PD VT +++L + + N +H +IK G + ++++D
Sbjct: 237 VVMFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 117 SY-----------------------CKIRCLDLAR-----------RVFKEMPQK-DSVS 141
Y C L+R +FKE + + VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 142 FNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
+ ++I G A+ G + EA++LF EMQ G KP+ T + L A +A + GR H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
+ + ++NV V +AL+D+Y+K + ++ +F MP + V +N ++ ++ + + KE +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 262 LFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL----- 316
+F L TR F++LLS Q+G E + L
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACG-----QVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 317 -VDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
V++ + G+ +EA ++ + + W A++++ + N++ A
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 370/662 (55%), Gaps = 1/662 (0%)
Query: 88 TANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALIT 147
T N L Q+H +I + + N L+ R + +F + +N+LI
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 148 GFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVE 207
GF L E + LF+ ++ G FTF L A + LG +H+ VVK F
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 208 NVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQ 267
+V +LL +YS + +A KLF E+P+ V++ + + Y + +++E++ LF+++
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 268 FTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFE 327
+ +LS + DL G I V +LV++YAKCG+ E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 328 EAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASA 387
+A+ +F ++ V W+ MI Y +E + LF++M + N+ DQ + L + A
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 388 ELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNA 447
L +L LG+ S + R F++N+F +AL+DMYAK G++ + FKEM E++IV NA
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 448 LISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKY 507
IS A+NG + + F + G PD + L +L C H GLI++GL++FN+++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 508 KLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKA 567
L+ EHY MVD+ R+G D+A +L+ MP P+ I+W ++++ CR+ K+ + A+
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 568 ADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVH 627
+L +E +A YV +SNIY+V G+W+ ++V+ M ++G++K+ YSW+EL+ KVH
Sbjct: 505 LKELIALEPW-NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563
Query: 628 VFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAI 687
F A+D+ HP +++I K+E+L EM+ G+ P T D +EE K L YHSE+LA+
Sbjct: 564 EFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAV 623
Query: 688 AFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRD 747
A LI+T G I V+KNLR C DCH +KLISKIT REI VRD++RFH F +G CSC D
Sbjct: 624 ALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683
Query: 748 FW 749
+W
Sbjct: 684 YW 685
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 205/429 (47%), Gaps = 3/429 (0%)
Query: 43 LIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKF 102
LI G+ + F E LF+ +R G + TF +L C+ + I +H+ ++K
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGF-TFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 103 GYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF 162
G+N + SL+ Y L+ A ++F E+P + V++ AL +G+ G + EAI LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 163 VEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKH 222
+M +G KP + LSA V + D+ G + ++ + +N FV L++LY+K
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 223 DCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLL 282
+ +AR +F M E D V+++ MI YA N KE ++LF ++ QF L
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 283 SVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTV 342
S A+ L +G + ++ + +AN+L+DMYAKCG E+F + V
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 343 PWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLG-KQLHSF 401
A IS + G+++ + +F + + IS D +TF +L + G + ++
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 402 VIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQA 460
V ++D++ ++G L DA + +MP R N + W AL+S C D Q
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 461 TLKSFEDMV 469
++++
Sbjct: 501 AETVLKELI 509
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 7/352 (1%)
Query: 3 NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
N + + L+S Y SG L A +LF+ + DR+ V+WT L GY+ + REA LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 63 MRTDGGSDPDYVTFATLLSGCSEPD--TANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M + G PD +LS C + E I + + ++ NS + +LV+ Y K
Sbjct: 203 M-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS--FVRTTLVNLYAK 259
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
++ AR VF M +KD V+++ +I G+A +E I+LF++M KP F+
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
LS+ L + LG + + + F+ N+F+ANAL+D+Y+K + ++F EM E D
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
V N I+ A N K S +F + + F LL + +Q G +
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439
Query: 301 TIVTTAISE-VKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
A+ V+ +VD++ + G ++A + ++ + + W A++S
Sbjct: 440 ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 392/666 (58%), Gaps = 3/666 (0%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N + LI Y++ G + +LF+ ++ + V W +++ GY++ K F MR
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
D S P+ VTF +LS C+ + +Q+H ++ G + I NSL+ Y K
Sbjct: 232 MDQIS-PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
D A ++F+ M + D+V++N +I+G+ + GL EE++ F EM G P TF++ L +
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 185 VGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYN 244
++ +Q+H ++++ + ++F+ +AL+D Y K V A+ +F + VD V +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 245 VMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVT 304
MI+ Y N Y +SL++FR L + ++ ++L V+ L L++GR++H I
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
+ + +++DMYAKCGR A EIF LS V W +MI+ Q N A+++F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
+M + I D + ++ L A A L S S GK +H F+I+ S+V+S S L+DMYAK
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQ-SGYQPDSVSLLSV 483
G+LK A+ FK M E+NIVSWN++I+AC +G + +L F +MV+ SG +PD ++ L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
+S+C H G ++EG+++F SMT+ Y ++P++EHYA +VD+ R+G EA + + MPF P
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 544 DEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVK 603
D +W +++ +CR+HKN+E A+ A+ +L ++ ++ YV +SN +A A +WESV++V+
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDP-SNSGYYVLISNAHANAREWESVTKVR 769
Query: 604 KAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
M+ER V+K+ YSW+E+ + H+F + D HP+++ I + +L+ E++ EGY P
Sbjct: 770 SLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829
Query: 664 CALHDE 669
LH E
Sbjct: 830 LPLHPE 835
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 240/492 (48%), Gaps = 24/492 (4%)
Query: 76 FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLV-DSYCKIRCL---------- 124
+ LL CS P+ + QVHA +I NS+ DSY R L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHA----------FLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 125 DLARRVFKEMPQKDSV-SFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
D + ++ ++ S+ +N++I+ F + GL +A+ + +M G P TF + A
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
V L + + V N FVA++L+ Y ++ + KLF + + D V +
Sbjct: 148 CVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 207
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
NVM+ YA +K F ++ + + F +LSV A+KL + +G Q+H +V
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
+ E + NSL+ MY+KCGRF++A ++F +S TV W MIS YVQ G +EE+L
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
F EM + + D TF+S+L + ++ +L KQ+H +++R ++F SAL+D Y K
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSV 483
+ A F + ++V + A+IS NG +L+ F +V+ P+ ++L+S+
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSI 447
Query: 484 LSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEP 543
L ++ G + + +K + +++D+ + G + A ++ ++ +
Sbjct: 448 LPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KR 505
Query: 544 DEIMWSSVINSC 555
D + W+S+I C
Sbjct: 506 DIVSWNSMITRC 517
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 256 YKESLKLFRELQFTRFDRSQFP--FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVA 313
YK+SL L +RF P S LL +N L+ G+Q+H IV + +
Sbjct: 17 YKKSLPLRNS---SRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTD 73
Query: 314 NSLVDMYAKCGRFEEAKEIF--ANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
++ MYA CG F + ++F +L S PW ++IS++V+ G L +AL + +M
Sbjct: 74 ERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG 133
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
+S D +TF +++A L + L V G N F S+L+ Y + G +
Sbjct: 134 VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPS 193
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
+ F + +++ V WN +++ A+ G + +K F M P++V+ VLS C+
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
LI+ G+Q + + + + S++ + + G FD+A KL M D + W+ +
Sbjct: 254 LIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCM 311
Query: 552 IN 553
I+
Sbjct: 312 IS 313
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/723 (35%), Positives = 398/723 (55%), Gaps = 47/723 (6%)
Query: 69 SDPDYVTF-----ATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYC---- 119
SDP Y + +LL C T L +HA +IK G ++ + L++ +C
Sbjct: 24 SDPPYDSIRNHPSLSLLHNCK---TLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSP 79
Query: 120 KIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAA 179
L A VFK + + + + +N + G A A+KL+V M LG P+ +TF
Sbjct: 80 HFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139
Query: 180 ALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLY---------------SKHDC 224
L + G+Q+H V+K +++V +L+ +Y S H
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 225 VV----------------EARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
VV A+KLF E+P D VS+N MI+ YA YKE+L+LF+++
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
T + T++S A +++GRQ+H S +K+ N+L+D+Y+KCG E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
A +F L + + W +I Y +EAL LF EM R+ + + T SIL A A
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 389 LASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWN 446
L ++ +G+ +H ++ + G + ++L+DMYAK G ++ A Q F + +++ SWN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 447 ALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQK 506
A+I A +G A A+ F M + G QPD ++ + +LSACSH G+++ G F +MTQ
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 507 YKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
YK+ PK EHY M+D+L SG F EAE+++ M EPD ++W S++ +C++H N+E +
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559
Query: 567 AADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKV 626
A+ L K+E + YV +SNIYA AG+W V++ + + ++G++KV S +E+ S V
Sbjct: 560 FAENLIKIEP-ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 627 HVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLA 686
H F D+ HP+ EI +E + ++K G+ PDTS L + +EE K +L++HSE+LA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 687 IAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCR 746
IAF LI+T G+ + ++KNLR C +CH A KLISKI REI RD +RFHHF+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 747 DFW 749
D+W
Sbjct: 739 DYW 741
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 234/505 (46%), Gaps = 43/505 (8%)
Query: 21 NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLL 80
L A +F ++ + + W + G++ + A KL+V M G P+ TF +L
Sbjct: 83 GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVL 141
Query: 81 SGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFK-------- 132
C++ E Q+H ++K G + L + SL+ Y + L+ A +VF
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 133 -----------------------EMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLG 169
E+P KD VS+NA+I+G+A+ G +EA++LF +M
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 170 FKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEAR 229
+P + T +SA I LGRQVH ++ F N+ + NAL+DLYSK + A
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 230 KLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKL 289
LF +P D +S+N +I Y YKE+L LF+E+ + + ++L A+
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 290 DLQIGRQIHTQTI-----VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPW 344
+ IGR IH VT A S + SL+DMYAKCG E A ++F ++ H S W
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 345 TAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIR 404
AMI + G + + +LF M + I D TF +L A + L LG+ + + +
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 405 SGFMSNVFSG-SALLDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQATL 462
M+ ++D+ SG K+A + M + V W +L+ AC +G+ +
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 463 KSFEDMVQ-SGYQPDSVSLLSVLSA 486
E++++ P S LLS + A
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYA 583
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 214/469 (45%), Gaps = 32/469 (6%)
Query: 2 PNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFV 61
P+++ VS LI GY G + A++LF+ + + VSW +I GY++ ++EA +LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 62 DMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
DM PD T T++S C++ + QVH I G+ S L I N+L+D Y K
Sbjct: 256 DMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 122 RCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAAL 181
L+ A +F+ +P KD +S+N LI G+ L +EA+ LF EM G P+D T + L
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 182 SAGVGLADIALGRQVHAFVVK--TNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD 239
A L I +GR +H ++ K + +L+D+Y+K + A ++F +
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 240 GVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQI-H 298
S+N MI +A + + S LF ++ F LLS ++ L +GR I
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 299 TQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS-TVPWTAMISAYVQKGNL 357
T T +++ ++D+ G F+EA+E+ + V W +++ A GN+
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 358 E------------EALNLFIEMCRANISADQATFASILRASAEL-----------ASLSL 394
E E N + +NI A + + + A L +S+ +
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614
Query: 395 GKQLHSFVIRSGFMSNVFSGSALLD----MYAKSGSLKDAIQTFKEMPE 439
+H F+I F +L+ + K+G + D + +EM E
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/557 (40%), Positives = 341/557 (61%), Gaps = 1/557 (0%)
Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
+ H +++ + +V + N L++ YSK V AR++F M E VS+N MI Y
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 253 NEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKV 312
N E+L +F E++ F S+F S++LS D +++H ++ T + V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 313 ANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANI 372
+L+D+YAKCG ++A ++F ++ S+V W++M++ YVQ N EEAL L+ R ++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 373 SADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQ 432
+Q T +S++ A + LA+L GKQ+H+ + +SGF SNVF S+ +DMYAK GSL+++
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 433 TFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGL 492
F E+ E+N+ WN +IS A++ + + FE M Q G P+ V+ S+LS C H GL
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 493 IEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
+EEG ++F M Y L P HY+ MVDIL R+G EA +L+ +PF+P +W S++
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 553 NSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVR 612
SCR++KNLE A+ AA++LF++E +A +V +SNIYA QWE +++ +K +R+ V+
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEP-ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498
Query: 613 KVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEE 672
KV SW+++K KVH F+ + HP+ EI ++NL+ + +K GYKP LHD +
Sbjct: 499 KVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIG 558
Query: 673 IKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDS 732
K E L HSE+LA+ F L+ PE SP+ +MKNLR C DCH +K S T R I VRD
Sbjct: 559 KKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDV 618
Query: 733 SRFHHFKDGFCSCRDFW 749
+RFHHF DG CSC DFW
Sbjct: 619 NRFHHFSDGHCSCGDFW 635
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 200/376 (53%), Gaps = 2/376 (0%)
Query: 79 LLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD 138
+L C+ E H II+ + + N L+++Y K ++LAR+VF M ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
VS+N +I + + + EA+ +F+EM++ GFK S+FT ++ LSA D +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
VKT N++V ALLDLY+K + +A ++F M + V+++ M+ Y N+ Y+E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
+L L+R Q +++QF S+++ +N L G+Q+H + S V VA+S VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQAT 378
MYAKCG E+ IF+ + + W +IS + + +E + LF +M + + ++ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 379 FASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEM 437
F+S+L + G++ + + G NV S ++D+ ++G L +A + K +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 438 PERNIVS-WNALISAC 452
P S W +L+++C
Sbjct: 427 PFDPTASIWGSLLASC 442
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 194/353 (54%), Gaps = 3/353 (0%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N+LI+ Y K G + AR++F+ M++R+ VSW +IG Y++ EA +F++MR +G
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
++ T +++LS C A E ++H +K + L + +L+D Y K + A +
Sbjct: 160 FSEF-TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
VF+ M K SV++++++ G+ + EEA+ L+ Q + + + FT ++ + A LA
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
+ G+Q+HA + K+ F NVFVA++ +D+Y+K + E+ +F E+ E + +N +I+
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISE 309
+A + + KE + LF ++Q ++ FS+LLSV + ++ GR+ T +S
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 310 VKVANS-LVDMYAKCGRFEEAKEIFANLSHISTVP-WTAMISAYVQKGNLEEA 360
V S +VD+ + G EA E+ ++ T W +++++ NLE A
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELA 451
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 162/329 (49%), Gaps = 15/329 (4%)
Query: 281 LLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIS 340
+L + A + + H + I +V + N L++ Y+KCG E A+++F + S
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 341 TVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHS 400
V W MI Y + EAL++F+EM + T +S+L A K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 401 FVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQA 460
+++ N++ G+ALLD+YAK G +KDA+Q F+ M +++ V+W+++++ QN + +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 461 TLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMV 520
L + + + + +L SV+ ACS+ + EG Q +++ K +S V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAV 305
Query: 521 DILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQ--LFKMEKLR 578
D+ + G E+ + +++ E + +W+++I+ FAK A + + EK++
Sbjct: 306 DMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISG--------FAKHARPKEVMILFEKMQ 356
Query: 579 DAAPY---VAMSNIYAVAGQWESVSQVKK 604
+ V S++ +V G V + ++
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 69/253 (27%)
Query: 16 YVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVT 75
Y K G+L + +F+ + ++ W +I G+++ + +E LF M+ D G P+ VT
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVT 366
Query: 76 FATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMP 135
F++LLS C H +++ G R L R + P
Sbjct: 367 FSSLLSVCG-----------HTGLVEEGR-----------------RFFKLMRTTYGLSP 398
Query: 136 QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQ 195
+ V ++ ++ + GL EA +L ++ + F P+ + + L++ ++ L
Sbjct: 399 --NVVHYSCMVDILGRAGLLSEAYEL---IKSIPFDPTASIWGSLLASCRVYKNLELAE- 452
Query: 196 VHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQ 255
V A KLF PE G ++ ++ YA N+Q
Sbjct: 453 ------------------------------VAAEKLFELEPENAG-NHVLLSNIYAANKQ 481
Query: 256 YKE---SLKLFRE 265
++E S KL R+
Sbjct: 482 WEEIAKSRKLLRD 494
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/763 (32%), Positives = 422/763 (55%), Gaps = 36/763 (4%)
Query: 21 NLATARELF-NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
+L+ A+E+F NS T + LI GY+ EA LF+ M G S PD TF
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFG 140
Query: 80 LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
LS C++ IQ+H I+K GY L + NSLV Y + LD AR+VF EM +++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 140 VSFNALITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
VS+ ++I G+A+ ++A+ LF M + P+ T +SA L D+ G +V+A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKE 258
F+ + N + +AL+D+Y K + + A++LF E + N M + Y +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 259 SLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVD 318
+L +F + + + + +S + ++ G+ H + S + N+L+D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 319 MYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL--------------------- 357
MY KC R + A IF +S+ + V W ++++ YV+ G +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 358 ----------EEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSG 406
EEA+ +F M + ++AD T SI A L +L L K ++ ++ ++G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFE 466
+V G+ L+DM+++ G + A+ F + R++ +W A I A A G+A+ ++ F+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 467 DMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRS 526
DM++ G +PD V+ + L+ACSH GL+++G + F SM + + + P+ HY MVD+L R+
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 527 GCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAM 586
G +EA +L+ MP EP++++W+S++ +CR+ N+E A AA+++ + R + YV +
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS-YVLL 679
Query: 587 SNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKI 646
SN+YA AG+W +++V+ +M+E+G+RK S ++++ K H FT+ DE HP+ I +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 647 ENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNL 706
+ + Q G+ PD S L D DE+ K+ L HSE+LA+A+ LI++ +G+ I ++KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799
Query: 707 RACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
R C+DCH+ K SK+ REI +RD++RFH+ + G CSC DFW
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 234/484 (48%), Gaps = 34/484 (7%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N L+ Y + G L +AR++F+ M +R VSWT +I GY++++ ++A LF M D
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
P+ VT ++S C++ + +V+A I G ++ ++LVD Y K +D+A+R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
+F E + NA+ + + ++GL EA+ +F M G +P + +A+S+ L +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSK---------------------------- 221
I G+ H +V++ F + NAL+D+Y K
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 222 ---HDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTR-FDRSQFP 277
+ V A + F MPE + VS+N +I+ ++E++++F +Q +
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS 337
++ S + L + + I+ +V++ +LVDM+++CG E A IF +L+
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 338 HISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQ 397
+ WTA I A GN E A+ LF +M + D F L A + + GK+
Sbjct: 533 NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKE 592
Query: 398 L-HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQN 455
+ +S + G ++D+ ++G L++A+Q ++MP E N V WN+L++AC
Sbjct: 593 IFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652
Query: 456 GDAQ 459
G+ +
Sbjct: 653 GNVE 656
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M N+ V+ N +++GYV++G + A E F +M ++ VSW +I G Q + F EA ++F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M++ G + D VT ++ S C + ++ I K G + + +LVD + +
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+ A +F + +D ++ A I A G E AI+LF +M G KP F A
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFV--ENVFVANALLDLYSKHDCVVEARKLFGEMP-E 237
L+A + G+++ ++K + V E+V ++DL + + EA +L +MP E
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 238 VDGVSYNVMI 247
+ V +N ++
Sbjct: 637 PNDVIWNSLL 646
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL--KDAIQTFKEMPERN-----IVSWNAL 448
K H + + G ++V S + + A+S L ++++ KE+ E + +N+L
Sbjct: 49 KMFHRSLTKQGLDNDV---STITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105
Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
I A +G + F M+ SG PD + LSAC+ G+Q + K
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV---K 162
Query: 509 LRPKKEHYA--SMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKK 566
+ K+ + S+V G D A K+ +M E + + W+S+I + +FAK
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAKD 218
Query: 567 AADQLFKMEKLRDAAP-YVAMSNIYAVAGQWESVSQVKKA---MRERGV 611
A D F+M + + P V M + + + E + +K +R G+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/639 (37%), Positives = 379/639 (59%), Gaps = 16/639 (2%)
Query: 114 LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPS 173
++ Y + L A +F EMP +D VS+N++I+G + G A+KLF EM + S
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP----ERS 127
Query: 174 DFTFAAALSAGV--GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKL 231
++ A ++ G D A R + VK + N+++ Y + V +A KL
Sbjct: 128 VVSWTAMVNGCFRSGKVDQA-ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKL 181
Query: 232 FGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDL 291
F +MP + +S+ MI NE+ E+L LF+ + + PF+ +++ AN
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 292 QIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAY 351
+G Q+H I + E V+ SL+ YA C R +++++F H WTA++S Y
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNV 411
E+AL++F M R +I +Q+TFAS L + + L +L GK++H ++ G ++
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 412 FSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQS 471
F G++L+ MY+ SG++ DA+ F ++ +++IVSWN++I CAQ+G + F M++
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 472 GYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK-LRPKKEHYASMVDILCRSGCFD 530
+PD ++ +LSACSHCG +E+G + F M+ + K +HY MVDIL R G
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLK 481
Query: 531 EAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIY 590
EAE+L+ +M +P+E++W +++++CR+H +++ +KAA +F ++ + +A YV +SNIY
Sbjct: 482 EAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS-KSSAAYVLLSNIY 540
Query: 591 AVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLM 650
A AG+W +VS+++ M++ G+ K SWV ++ K H F + D+ P + I K+E L
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLR 598
Query: 651 QEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACT 710
+++K+ GY PD ALHD ++E K E L YHSERLAIAF LINT EGS + VMKNLR C
Sbjct: 599 EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCE 658
Query: 711 DCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
DCH IKLIS + GREI +RD RFHHFK+G CSC D+W
Sbjct: 659 DCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 216/461 (46%), Gaps = 45/461 (9%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++ VS N +ISG V+ G++ TA +LF+ M +R+ VSWT ++ G + + +A +LF
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF 151
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M DTA NS+V Y +
Sbjct: 152 YQMPV--------------------KDTA--------------------AWNSMVHGYLQ 171
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+D A ++FK+MP K+ +S+ +I G + + EA+ LF M K + F
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
++A +G QVH ++K F+ +V+ +L+ Y+ + ++RK+F E
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
+ +++ Y+ N++++++L +F + +Q F++ L+ + L G+++H
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
+ ++ V NSLV MY+ G +A +F + S V W ++I Q G + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM---SNVFSGSAL 417
+F +M R N D+ TF +L A + L G++L + + SG + + +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCM 470
Query: 418 LDMYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGD 457
+D+ + G LK+A + + M + N + W AL+SAC + D
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 182/428 (42%), Gaps = 39/428 (9%)
Query: 187 LADIALGRQVHAFVVKTNFV-ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
++ + G+ +F V F V + N LL + EAR++F ++P Y
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRR-----IDEAREVFNQVPSPHVSLYTK 71
Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIG---------RQ 296
MIT Y + + ++L LF E+ R +++++S D+ R
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPV----RDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 297 IHTQTIVTTA------------------ISEVKVANSLVDMYAKCGRFEEAKEIFANLSH 338
+ + T + + + NS+V Y + G+ ++A ++F +
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
+ + WT MI Q EAL+LF M R I + F ++ A A + +G Q+
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDA 458
H +I+ GF+ + ++L+ YA + D+ + F E + W AL+S + N
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 459 QATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYAS 518
+ L F M+++ P+ + S L++CS G ++ G + + + K L S
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNS 366
Query: 519 MVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLR 578
+V + SG ++A + ++ F+ + W+S+I C H ++A Q+ ++ K
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 579 DAAPYVAM 586
D + +
Sbjct: 426 DEITFTGL 433
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/649 (35%), Positives = 360/649 (55%), Gaps = 44/649 (6%)
Query: 111 CNS-----LVDSYCKIRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEM 165
CNS L+ +Y ++ + AR+VF E+P+++ + N +I + G E +K+F M
Sbjct: 72 CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 166 QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCV 225
+P +TF L A I +GR++H K +FV N L+ +Y K +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 226 VEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV 285
EAR + EM D VS+N ++ YA N+++ ++L++ RE++ + ++LL V
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 286 ANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWT 345
+N T+ + MY K ++F + S V W
Sbjct: 252 SNTT---------TENV----------------MYVK--------DMFFKMGKKSLVSWN 278
Query: 346 AMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS 405
MI Y++ EA+ L+ M D + S+L A + ++LSLGK++H ++ R
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 406 GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
+ N+ +AL+DMYAK G L+ A F+ M R++VSW A+ISA +G + F
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
+ SG PDS++ ++ L+ACSH GL+EEG F MT YK+ P+ EH A MVD+L R
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458
Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
+G EA + + M EP+E +W +++ +CR+H + + AAD+LF++ + YV
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAP-EQSGYYVL 517
Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
+SNIYA AG+WE V+ ++ M+ +G++K S VE+ +H F D HPQ++EI R+
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 646 IENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTPE-----GSPI 700
++ L+++MK+ GY PD+ ALHD +EE K L HSE+LAI FAL+NT E + I
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637
Query: 701 LVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
+ KNLR C DCH A KLIS+IT REI +RD++RFH F+ G CSC D+W
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 41/469 (8%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+ Y ++A+AR++F+ + +R + ++I Y + E K+F M P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRP 138
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D+ TF +L CS T ++H K G +S L + N LV Y K L AR V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
EM ++D VS+N+L+ G+A+ ++A+++ EM+ + T A+ L A
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-------- 250
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
V ENV +Y K +F +M + VS+NVMI Y
Sbjct: 251 ---------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
N E+++L+ ++ F+ +++L + L +G++IH I +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
+ N+L+DMYAKCG E+A+++F N+ V WTAMISAY G +A+ LF ++ +
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSA-LLDMYAKSGSLKDA 430
+ D F + L A + L G+ + ++ A ++D+ ++G +K+A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 431 IQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFEDMV-----QSGY 473
+ ++M E N W AL+ AC + D L + + + QSGY
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 36/343 (10%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N L+S Y K G L+ AR + + M R VSW L+ GY+Q +F +A ++ +M + S
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
D T A+LL S T N + +
Sbjct: 239 H-DAGTMASLLPAVSNTTTENVM---------------------------------YVKD 264
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
+F +M +K VS+N +I + K + EA++L+ M+ GF+P + + L A +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
++LG+++H ++ + + N+ + NAL+D+Y+K C+ +AR +F M D VS+ MI+
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS- 308
Y ++ + +++ LF +LQ + F T L+ ++ L+ GR I+
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISA 350
++ +VD+ + G+ +EA ++S + W A++ A
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 8/331 (2%)
Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
D++ R +H++ I+ + L+ YA A+++F + + + MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMS 409
+YV G E + +F MC N+ D TF +L+A + ++ +G+++H + G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 410 NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV 469
+F G+ L+ MY K G L +A EM R++VSWN+L+ AQN L+ +M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 470 QSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKK-EHYASMVDILCRSGC 528
D+ ++ S+L A S+ E + Y M +K+ K + M+ + ++
Sbjct: 234 SVKISHDAGTMASLLPAVSNT--TTENVMYVKDMF--FKMGKKSLVSWNVMIGVYMKNAM 289
Query: 529 FDEAEKLMAQMP---FEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
EA +L ++M FEPD + +SV+ +C L KK + + + + + A
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
+ ++YA G E V + M+ R V TA
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N + N LI Y K G L AR++F +M R VSWT +I Y + +A LF ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
D G PD + F T L+ CS HA +++ G + C
Sbjct: 403 -DSGLVPDSIAFVTTLAACS-----------HAGLLEEGRS-----------------CF 433
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAG 184
L +K P+ + ++ ++ + G +EA + +Q + +P++ + A L A
Sbjct: 434 KLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRF---IQDMSMEPNERVWGALLGAC 488
Query: 185 VGLADIALG 193
+D +G
Sbjct: 489 RVHSDTDIG 497
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/671 (34%), Positives = 388/671 (57%), Gaps = 71/671 (10%)
Query: 56 AFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQ-VHADIIKFGYNSILIICNSL 114
A K F+ + D S D FA LL C + + ++ VHA +IK G+++ + I N L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 115 VDSYCKIRCLDLARRVFKEMPQK-------------------------------DSVSFN 143
+D+Y K L+ R+VF +MPQ+ D ++N
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 144 ALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKT 203
++++GFA+ EEA+ F M GF ++++FA+ LSA GL D+ G QVH+ + K+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 204 NFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLF 263
F+ +V++ +AL+D+YSK V +A+++F EM + + VS+N +ITC+ N E+L +F
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241
Query: 264 RELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAK 322
+ + +R + + ++++S A+ +++G+++H + + + +++ ++N+ VDMYAK
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 323 CGRFEEAKEIF---------ANLSHIS----------------------TVPWTAMISAY 351
C R +EA+ IF A S IS V W A+I+ Y
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 352 VQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFM--- 408
Q G EEAL+LF + R ++ +FA+IL+A A+LA L LG Q H V++ GF
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 409 ---SNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSF 465
++F G++L+DMY K G +++ F++M ER+ VSWNA+I AQNG L+ F
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 466 EDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCR 525
+M++SG +PD ++++ VLSAC H G +EEG YF+SMT+ + + P ++HY MVD+L R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 526 SGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVA 585
+G +EA+ ++ +MP +PD ++W S++ +C++H+N+ K A++L ++E ++ PYV
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP-SNSGPYVL 600
Query: 586 MSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRK 645
+SN+YA G+WE V V+K+MR+ GV K SW++++ HVF D+ HP+ +I
Sbjct: 601 LSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSL 660
Query: 646 IENLMQEMKKE 656
++ L+ EM+ E
Sbjct: 661 LDILIAEMRPE 671
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 246/492 (50%), Gaps = 41/492 (8%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP +N + N +++G K G L A LF SM +R +W ++ G++Q ++ EA F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M +G +Y +FA++LS CS + N+ +QVH+ I K + S + I ++LVD Y K
Sbjct: 141 AMMHKEGFVLNEY-SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
++ A+RVF EM ++ VS+N+LIT F + G EA+ +F M +P + T A+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVEN-VFVANALLDLYSKHDCVVEARKLFGEMP--- 236
+SA L+ I +G++VH VVK + + N + ++NA +D+Y+K + EAR +F MP
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 237 ----------------------------EVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
E + VS+N +I Y N + +E+L LF L+
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI------VTTAISEVKVANSLVDMYAK 322
+ + F+ +L A+ +L +G Q H + + ++ V NSL+DMY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 323 CGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASI 382
CG EE +F + V W AMI + Q G EAL LF EM + D T +
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGV 499
Query: 383 LRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ER 440
L A + G+ S + R G + ++D+ ++G L++A +EMP +
Sbjct: 500 LSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 441 NIVSWNALISAC 452
+ V W +L++AC
Sbjct: 560 DSVIWGSLLAAC 571
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/627 (37%), Positives = 369/627 (58%), Gaps = 10/627 (1%)
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
+ + + D S+N++I A+ G + EA+ F M+ L P+ +F A+ A L DI
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
G+Q H + ++FV++AL+ +YS + +ARK+F E+P+ + VS+ MI Y
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPF---STLLSVVA--NKLDLQ-IGRQIHTQTIVTT 305
N +++ LF++L D F L+SV++ +++ + + IH+ I
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 306 AISEVKVANSLVDMYAKCGR--FEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
V V N+L+D YAK G A++IF + V + +++S Y Q G EA +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 364 FIEMCRANISADQA-TFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYA 422
F + + + A T +++L A + +L +GK +H VIR G +V G++++DMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 423 KSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLS 482
K G ++ A + F M +N+ SW A+I+ +G A L+ F M+ SG +P+ ++ +S
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 483 VLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFE 542
VL+ACSH GL EG ++FN+M ++ + P EHY MVD+L R+G +A L+ +M +
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 543 PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQV 602
PD I+WSS++ +CRIHKN+E A+ + +LF+++ + Y+ +S+IYA AG+W+ V +V
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDS-SNCGYYMLLSHIYADAGRWKDVERV 512
Query: 603 KKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDT 662
+ M+ RG+ K +S +EL +VHVF DE HPQ +I + L +++ + GY +T
Sbjct: 513 RMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572
Query: 663 SCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKI 722
S HD DEE K +L+ HSE+LAIAF ++NT GS + V+KNLR C+DCH IKLISKI
Sbjct: 573 SSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKI 632
Query: 723 TGREITVRDSSRFHHFKDGFCSCRDFW 749
RE VRD+ RFHHFKDG CSC D+W
Sbjct: 633 VDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 218/448 (48%), Gaps = 24/448 (5%)
Query: 21 NLATARELFNSMVDRTAV-SWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
NL T LFN VD+T V SW +I ++ EA F MR P +F
Sbjct: 27 NLTT---LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82
Query: 80 LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
+ CS Q H FGY S + + ++L+ Y L+ AR+VF E+P+++
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTF------AAALSAGVGLADIALG 193
VS+ ++I G+ G +A+ LF ++ D F + +SA + L
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 194 RQVHAFVVKTNFVENVFVANALLDLYSK--HDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
+H+FV+K F V V N LLD Y+K V ARK+F ++ + D VSYN +++ YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 252 WNEQYKESLKLFREL---QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
+ E+ ++FR L + F+ ST+L V++ L+IG+ IH Q I
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFN--AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMC 368
+V V S++DMY KCGR E A++ F + + + WTAMI+ Y G+ +AL LF M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 369 RANISADQATFASILRASAELASLSLG-KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
+ + + TF S+L A + G + ++ R G + ++D+ ++G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 428 K---DAIQTFKEMPERNIVSWNALISAC 452
+ D IQ K P+ I W++L++AC
Sbjct: 441 QKAYDLIQRMKMKPDSII--WSSLLAAC 466
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 10 NMLISGYVKSG--NLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
N L+ Y K G +A AR++F+ +VD+ VS+ ++ Y+Q EAF++F + +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
+ +T +T+L S +H +I+ G +I+ S++D YCK ++ A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
R+ F M K+ S+ A+I G+ G +A++LF M G +P+ TF + L+A
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Score = 37.0 bits (84), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTA----VSWTILIGGYSQKNQFREA 56
M N+N S +I+GY G+ A A ELF +M+D +++ ++ S E
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Query: 57 FKLFVDMRTDGGSDPD---YVTFATLLSGCSEPDTANELIQ 94
++ F M+ G +P Y LL A +LIQ
Sbjct: 408 WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 341/613 (55%), Gaps = 9/613 (1%)
Query: 139 SVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHA 198
S +N + A + L E+I L+ M G P F+F L + L+ G+Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 199 FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVD--GVSYNVMITCYAWNEQY 256
V K FV AL+ +Y K V +ARK+F E P+ V YN +I+ Y N +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 257 KESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSL 316
++ +FR ++ T L+ + L +GR +H Q + SEV V NS
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 317 VDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQ 376
+ MY KCG E + +F + + W A+IS Y Q G + L L+ +M + + D
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 377 ATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKE 436
T S+L + A L + +G ++ V +GF+ NVF +A + MYA+ G+L A F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 437 MPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEG 496
MP +++VSW A+I +G + L F+DM++ G +PD + VLSACSH GL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 497 LQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCR 556
L+ F +M ++YKL P EHY+ +VD+L R+G DEA + + MP EPD +W +++ +C+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 557 IHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTA 616
IHKN++ A+ A ++ + E + YV MSNIY+ + E + +++ MRER RK
Sbjct: 438 IHKNVDMAELAFAKVIEFEP-NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 617 YSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVE 676
YS+VE K +VH+F A D H QT E+ R ++ L + + D D EE+
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDC-----DRGEEVS-S 550
Query: 677 SLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFH 736
+ + HSERLAIAF ++N+ G+ ILV+KNLR C DCH +K +SKI R+ VRD+SRFH
Sbjct: 551 TTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFH 610
Query: 737 HFKDGFCSCRDFW 749
+FKDG CSC+D+W
Sbjct: 611 YFKDGVCSCKDYW 623
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 224/493 (45%), Gaps = 9/493 (1%)
Query: 30 NSMVDRTA-VSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATLLSGCSEPDT 88
NS V A W + + + ++ F E+ L+ M GS PD +F +L C+
Sbjct: 10 NSAVAAVASTPWNVRLRELAYQSLFSESISLYRSM-LRSGSSPDAFSFPFILKSCASLSL 68
Query: 89 ANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKD--SVSFNALI 146
Q+H + K G + + +L+ YCK + AR+VF+E PQ SV +NALI
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 147 TGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFV 206
+G+ +A +F M+ G T + + LGR +H VK
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 207 ENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFREL 266
V V N+ + +Y K V R+LF EMP +++N +I+ Y+ N + L+L+ ++
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 267 QFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRF 326
+ + F ++LS A+ +IG ++ + V V+N+ + MYA+CG
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 327 EEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRAS 386
+A+ +F + S V WTAMI Y G E L LF +M + I D A F +L A
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 387 AELASLSLGKQLHSFVIRS-GFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVS 444
+ G +L + R S L+D+ ++G L +A++ + MP E +
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 445 WNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMT 504
W AL+ AC + + +F +++ ++P+++ ++S +EG+ M
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
Query: 505 QKYKLRPKKEHYA 517
++ R KK Y+
Sbjct: 487 RERAFR-KKPGYS 498
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 174/356 (48%), Gaps = 11/356 (3%)
Query: 12 LISGYVKSGNLATARELF--NSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
LIS Y K G +A AR++F N + +V + LI GY+ ++ +A +F M+ G S
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
D VT L+ C+ P+ +H +K G +S + + NS + Y K ++ RR
Sbjct: 154 -VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLAD 189
+F EMP K +++NA+I+G+++ GL + ++L+ +M+ G P FT + LS+ L
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
+G +V V FV NVFV+NA + +Y++ + +AR +F MP VS+ MI C
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANK----LDLQIGRQIHTQTIVTT 305
Y + + L LF ++ F +LS ++ L++ R + + +
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP 392
Query: 306 AISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEA 360
+ LVD+ + GR +EA E ++ W A++ A N++ A
Sbjct: 393 GPEHY---SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMA 445
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 5/241 (2%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N I+ Y+K G++ R LF+ M + ++W +I GYSQ + +L+ M++ G
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
PD T ++LS C+ +V + G+ + + N+ + Y + L AR
Sbjct: 255 -PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGL 187
VF MP K VS+ A+I + G+ E + LF +M G +P F LSA GL
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP-EVDGVSYNVM 246
D L A + + L+DL + + EA + MP E DG + +
Sbjct: 374 TDKGL-ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 247 I 247
+
Sbjct: 433 L 433
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 339 ISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL 398
+++ PW + + E+++L+ M R+ S D +F IL++ A L+ G+QL
Sbjct: 16 VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75
Query: 399 HSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS--WNALISACAQNG 456
H V + G + F +AL+ MY K G + DA + F+E P+ + +S +NALIS N
Sbjct: 76 HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135
Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
F M ++G DSV++L ++ C+ + G + + K L +
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG-RSLHGQCVKGGLDSEVAVL 194
Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINS 554
S + + + G + +L +MP + I W++VI+
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG 231
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N +N IS Y + GNLA AR +F+ M ++ VSWT +IG Y LF DM
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM- 349
Query: 65 TDGGSDPDYVTFATLLSGCSEP---DTANELIQVHADIIKFGYNSILIICNSLVDSYCKI 121
G PD F +LS CS D EL + K C LVD +
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC--LVDLLGRA 407
Query: 122 RCLDLARRVFKEMP-QKDSVSFNALI 146
LD A + MP + D + AL+
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALL 433
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/746 (34%), Positives = 391/746 (52%), Gaps = 62/746 (8%)
Query: 7 VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTD 66
V+ + IS + G + AR+ F+S+ + SW ++ GY +EA +LF +M
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--- 74
Query: 67 GGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDL 126
S+ + V++ N LV Y K R +
Sbjct: 75 --SERNVVSW-----------------------------------NGLVSGYIKNRMIVE 97
Query: 127 ARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVG 186
AR VF+ MP+++ VS+ A++ G+ +EG+ EA LF M F + G
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDG-- 155
Query: 187 LADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVM 246
I R+++ + V++V + ++ + V EAR +F EM E + V++ M
Sbjct: 156 --RIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 247 ITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIH--TQTIVT 304
IT Y N + + KLF + P T +S + L + +I +
Sbjct: 210 ITGYRQNNRVDVARKLFEVM----------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 305 TAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF 364
+ V N+++ + + G +A+ +F + W MI AY +KG EAL+LF
Sbjct: 260 MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 365 IEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS 424
+M + + + SIL A LASL G+Q+H+ ++R F +V+ S L+ MY K
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC 379
Query: 425 GSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVL 484
G L A F ++I+ WN++IS A +G + LK F +M SG P+ V+L+++L
Sbjct: 380 GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 485 SACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPD 544
+ACS+ G +EEGL+ F SM K+ + P EHY+ VD+L R+G D+A +L+ M +PD
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499
Query: 545 EIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKK 604
+W +++ +C+ H L+ A+ AA +LF+ E +A YV +S+I A +W V+ V+K
Sbjct: 500 ATVWGALLGACKTHSRLDLAEVAAKKLFENEP-DNAGTYVLLSSINASRSKWGDVAVVRK 558
Query: 605 AMRERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTS 663
MR V K SW+E+ KVH+FT + HP+ I +E +++ GY PD S
Sbjct: 559 NMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCS 618
Query: 664 CALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKIT 723
LHD DEE KV+SL HSERLA+A+ L+ PEG PI VMKNLR C DCHAAIKLISK+T
Sbjct: 619 HVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVT 678
Query: 724 GREITVRDSSRFHHFKDGFCSCRDFW 749
REI +RD++RFHHF +G CSCRD+W
Sbjct: 679 EREIILRDANRFHHFNNGECSCRDYW 704
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 235/498 (47%), Gaps = 41/498 (8%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M +N VS N L+SGY+K+ + AR +F M +R VSWT ++ GY Q+ EA LF
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M + + V++ + G + ++ +++ D++ ++ +++ C+
Sbjct: 134 WRM-----PERNEVSWTVMFGGLIDDGRIDKARKLY-DMMPV---KDVVASTNMIGGLCR 184
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+D AR +F EM +++ V++ +ITG+ + + A KLF M + ++ ++ +
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSM 240
Query: 181 LSAGVGLADIALGRQVHA---FVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPE 237
L L GR A F V ++ V NA++ + + + +AR++F M +
Sbjct: 241 L-----LGYTLSGRIEDAEEFFEVMP--MKPVIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 238 VDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQ 296
D ++ MI Y E+L LF ++Q + R FP ++LSV A LQ GRQ
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGN 356
+H + +V VA+ L+ MY KCG +AK +F S + W ++IS Y G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 357 LEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFMSNVFSGS 415
EEAL +F EM + ++ T +IL A + L G ++ S + V S
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYS 472
Query: 416 ALLDMYAKSGSLKDAIQTFKEM---PERNIVSWNALISACAQNGDAQ----ATLKSFEDM 468
+DM ++G + A++ + M P+ + W AL+ AC + A K FE+
Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALLGACKTHSRLDLAEVAAKKLFEN- 529
Query: 469 VQSGYQPDSVSLLSVLSA 486
+PD+ +LS+
Sbjct: 530 -----EPDNAGTYVLLSS 542
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 220/458 (48%), Gaps = 41/458 (8%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP ++ V++ +I G + G + AR +F+ M +R V+WT +I GY Q N+ A KLF
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M + V++ ++L G T + I+ + + +I CN+++ + +
Sbjct: 227 EVM-----PEKTEVSWTSMLLGY----TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGE 277
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+ + ARRVF M +D+ ++ +I + ++G EA+ LF +MQ G +PS + +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
LS LA + GRQVHA +V+ F ++V+VA+ L+ +Y K +V+A+ +F D
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVV--ANKLD--LQIGRQ 296
+ +N +I+ YA + +E+LK+F E+ + ++ +L+ A KL+ L+I
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 297 IHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKG 355
+ ++ VT + VDM + G+ ++A E+ +++ W A++ A
Sbjct: 458 MESKFCVTPTVEHYSCT---VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 356 NLEEA--------------LNLFIEMCRANISADQATFASILRASAELASLS-------- 393
L+ A ++ + N S + +++R + ++S
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 394 -LGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
+GK++H F R G ++ L+ + G L++A
Sbjct: 575 EVGKKVHMFT-RGGIKNHPEQAMILMMLEKTDGLLREA 611
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 23/252 (9%)
Query: 396 KQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
K+L + R+ S + S + ++ G + +A + F + + I SWN+++S N
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61
Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
G + + F++M + + VS ++S +I E F M ++ +
Sbjct: 62 GLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV-----S 112
Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWS----SVINSCRIHKNLEFAKKAADQL 571
+ +MV + G EAE L +MP E +E+ W+ +I+ RI K A +L
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDGRIDK--------ARKL 163
Query: 572 FKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRK-VTAYSWVELKSKVHVFT 630
+ M ++D M G+ + + MRER V T + ++V V
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 631 ANDELHPQTNEI 642
E+ P+ E+
Sbjct: 224 KLFEVMPEKTEV 235
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/628 (37%), Positives = 360/628 (57%), Gaps = 6/628 (0%)
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
+ L R F P + I+ G +EA+ +EM LG + + A L+A
Sbjct: 5 MRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNA 61
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSY 243
+ + G++VHA ++KT ++ ++ LL Y K DC+ +ARK+ EMPE + VS+
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 244 NVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIV 303
MI+ Y+ E+L +F E+ + ++F F+T+L+ L +G+QIH +
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 304 TTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNL 363
S + V +SL+DMYAK G+ +EA+EIF L V TA+I+ Y Q G EEAL +
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 364 FIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAK 423
F + +S + T+AS+L A + LA L GKQ H V+R ++L+DMY+K
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 424 SGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMV-QSGYQPDSVSLLS 482
G+L A + F MPER +SWNA++ +++G + L+ F M + +PD+V+LL+
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 483 VLSACSHCGLIEEGLQYFNSMTQ-KYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
VLS CSH + + GL F+ M +Y +P EHY +VD+L R+G DEA + + +MP
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421
Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
+P + S++ +CR+H +++ + +L ++E +A YV +SN+YA AG+W V+
Sbjct: 422 KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP-ENAGNYVILSNLYASAGRWADVNN 480
Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
V+ M ++ V K SW++ + +H F AND HP+ E+ K++ + +MK+ GY PD
Sbjct: 481 VRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPD 540
Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
SC L+D DEE K + L HSE+LA+ F LI T EG PI V KNLR C DCH K+ SK
Sbjct: 541 LSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSK 600
Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
+ RE+++RD +RFH DG CSC D+W
Sbjct: 601 VFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 4/389 (1%)
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
G + + + LL+ C + + +VHA +IK Y + L+ Y K CL+ A
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106
Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
R+V EMP+K+ VS+ A+I+ +++ G + EA+ +F EM KP++FTFA L++ +
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
+ + LG+Q+H +VK N+ ++FV ++LLD+Y+K + EAR++F +PE D VS +I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
YA +E+L++F L + +++LL+ ++ L G+Q H +
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
+ NSL+DMY+KCG A+ +F N+ + + W AM+ Y + G E L LF M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 368 C-RANISADQATFASILRASAELASLSLGKQLHSFVIRS--GFMSNVFSGSALLDMYAKS 424
+ D T ++L + G + ++ G ++DM ++
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRA 406
Query: 425 GSLKDAIQTFKEMPERNIVS-WNALISAC 452
G + +A + K MP + +L+ AC
Sbjct: 407 GRIDEAFEFIKRMPSKPTAGVLGSLLGAC 435
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 194/378 (51%), Gaps = 33/378 (8%)
Query: 7 VSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD-MRT 65
+ T +LI Y K L AR++ + M ++ VSWT +I YSQ EA +F + MR+
Sbjct: 89 LRTRLLIF-YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 66 DGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLD 125
DG P+ TFAT+L+ C Q+H I+K+ Y+S + + +SL+D Y K +
Sbjct: 148 DG--KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 126 LARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGV 185
AR +F+ +P++D VS A+I G+A+ GL+EEA+++F + G P+ T+A+ L+A
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 186 GLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNV 245
GLA + G+Q H V++ + N+L+D+YSK + AR+LF MPE +S+N
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 246 MITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT 305
M+ Y+ + +E L+LFR ++ + R + TLL+V++ GR T +
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEK--RVKPDAVTLLAVLSG---CSHGRMEDTGLNIFD 380
Query: 306 AISEVKVANS--------LVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNL 357
+ + +VDM + GR +EA F + + + P ++ +
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA---FEFIKRMPSKPTAGVLGS------- 430
Query: 358 EEALNLFIEMCRANISAD 375
+ CR ++S D
Sbjct: 431 ------LLGACRVHLSVD 442
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/685 (33%), Positives = 385/685 (56%), Gaps = 13/685 (1%)
Query: 75 TFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEM 134
++L C+ +++ QVH ++K G LI N L+D YCK R +A +VF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 135 PQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGR 194
P+++ VS++AL++G G + ++ LF EM G P++FTF+ L A L + G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 195 QVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNE 254
Q+H F +K F V V N+L+D+YSK + EA K+F + + +S+N MI +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 255 QYKESLKLFRELQFTRFDR--SQFPFSTLLSVVANKLDLQIGRQIHTQTIVTT--AISEV 310
++L F +Q +F ++LL ++ + G+QIH + + S
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
+ SLVD+Y KCG A++ F + + + W+++I Y Q+G EA+ LF +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIR--SGFMSNVFSGSALLDMYAKSGSLK 428
N D +SI+ A+ A L GKQ+ + ++ SG ++V + +++DMY K G +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVD 365
Query: 429 DAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACS 488
+A + F EM ++++SW +I+ ++G + +++ F +M++ +PD V L+VLSACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 489 HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMW 548
H G+I+EG + F+ + + + ++P+ EHYA +VD+L R+G EA+ L+ MP +P+ +W
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 549 SSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRE 608
++++ CR+H ++E K+ L +++ ++ A YV MSN+Y AG W ++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDA-KNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 609 RGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKE-GYKPDTSCALH 667
+G++K SWVE++ +VH F + ++ HP T I+ ++ + +++E GY LH
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604
Query: 668 DEDEEIKVESLKYHSERLAIAFALIN---TPEGSPILVMKNLRACTDCHAAIKLISKITG 724
D D+E K E+L+ HSE+LAI AL +G I V KNLR C DCH IK +SKIT
Sbjct: 605 DIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITK 664
Query: 725 REITVRDSSRFHHFKDGFCSCRDFW 749
VRD+ RFH F+DG CSC D+W
Sbjct: 665 IAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 242/461 (52%), Gaps = 7/461 (1%)
Query: 5 NTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMR 64
N +++N LI Y K A ++F+SM +R VSW+ L+ G+ + + LF +M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 65 TDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCL 124
G P+ TF+T L C + + +Q+H +K G+ ++ + NSLVD Y K +
Sbjct: 100 RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 125 DLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFK--PSDFTFAAALS 182
+ A +VF+ + + +S+NA+I GF G +A+ F MQ K P +FT + L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 183 AGVGLADIALGRQVHAFVVKTNF--VENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
A I G+Q+H F+V++ F + + +L+DLY K + ARK F ++ E
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQ 300
+S++ +I YA ++ E++ LF+ LQ F S+++ V A+ L+ G+Q+
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 301 TIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEA 360
+ + E V NS+VDMY KCG +EA++ FA + + WT +I+ Y + G +++
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 361 LNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRS-GFMSNVFSGSALLD 419
+ +F EM R NI D+ + ++L A + + G++L S ++ + G V + ++D
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 458
Query: 420 MYAKSGSLKDAIQTFKEMPER-NIVSWNALISACAQNGDAQ 459
+ ++G LK+A MP + N+ W L+S C +GD +
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
I + SILR G Q+H ++++SG N+ + + L+DMY K A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 432 QTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCG 491
+ F MPERN+VSW+AL+S NGD + +L F +M + G P+ + + L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 492 LIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSV 551
+E+GLQ + K E S+VD+ + G +EAEK+ ++ + I W+++
Sbjct: 122 ALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179
Query: 552 INSCRIHKNLEFAKKAADQLFKMEK 576
I +H + KA D M++
Sbjct: 180 IAGF-VHAG--YGSKALDTFGMMQE 201
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/744 (33%), Positives = 408/744 (54%), Gaps = 59/744 (7%)
Query: 8 STNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDG 67
+ N+ I+ + G + AR+LF+S ++ SW ++ GY R+A KLF +M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 68 GSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLA 127
D + +++ L+SG + +E +V D++ ++ +LV Y +D+A
Sbjct: 75 -PDRNIISWNGLVSGYMKNGEIDEARKVF-DLMP---ERNVVSWTALVKGYVHNGKVDVA 129
Query: 128 RRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGL 187
+F +MP+K+ VS+ ++ GF ++G ++A KL+ EM D
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EM----IPDKD------------- 171
Query: 188 ADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMI 247
+IA +H K V EAR++F EM E +++ M+
Sbjct: 172 -NIARTSMIHGLC--------------------KEGRVDEAREIFDEMSERSVITWTTMV 210
Query: 248 TCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAI 307
T Y N + ++ K+F + ++++ ++++L ++ ++ V I
Sbjct: 211 TGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI 266
Query: 308 SEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEM 367
+ N+++ + G +A+ +F ++ + W +I + + G EAL+LFI M
Sbjct: 267 A----CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 368 CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSL 427
+ + T SIL A LASL GKQ+H+ ++R F +V+ S L+ MY K G L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 428 KDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG-YQPDSVSLLSVLSA 486
+ F P ++I+ WN++IS A +G + LK F +M SG +P+ V+ ++ LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 487 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 546
CS+ G++EEGL+ + SM + ++P HYA MVD+L R+G F+EA +++ M EPD
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502
Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
+W S++ +CR H L+ A+ A +L ++E ++ Y+ +SN+YA G+W V++++K M
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEP-ENSGTYILLSNMYASQGRWADVAELRKLM 561
Query: 607 RERGVRKVTAYSWVELKSKVHVFTAND-ELHPQTNEIRRKIENLMQEMKKEGYKPDTSCA 665
+ R VRK SW E+++KVH FT HP+ I + ++ L +++ GY PD S A
Sbjct: 562 KTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYA 621
Query: 666 LHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGR 725
LHD DEE KV SLKYHSERLA+A+AL+ EG PI VMKNLR C+DCH AIK+ISK+ R
Sbjct: 622 LHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKER 681
Query: 726 EITVRDSSRFHHFKDGFCSCRDFW 749
EI +RD++RFHHF++G CSC+D+W
Sbjct: 682 EIILRDANRFHHFRNGECSCKDYW 705
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 224/457 (49%), Gaps = 24/457 (5%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
MP++N +S N L+SGY+K+G + AR++F+ M +R VSWT L+ GY + A LF
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
M + + V++ +L G + ++ +++ ++I N I S++ CK
Sbjct: 134 WKM-----PEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDN---IARTSMIHGLCK 184
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+D AR +F EM ++ +++ ++TG+ + ++A K+F M + ++ ++ +
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSM 240
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
L V I ++ + V+ V NA++ + + +AR++F M E +
Sbjct: 241 LMGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP-FSTLLSVVANKLDLQIGRQIHT 299
S+ +I + N E+L LF +Q + R FP ++LSV A+ L G+Q+H
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 300 QTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEE 359
Q + +V VA+ L+ MY KCG ++K IF + W ++IS Y G EE
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 360 ALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSG--SA 416
AL +F EM + ++ TF + L A + + G +++ + S F + +
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPITAHYAC 474
Query: 417 LLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
++DM ++G +A++ M E + W +L+ AC
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 230/496 (46%), Gaps = 65/496 (13%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+P+++ ++ +I G K G + ARE+F+ M +R+ ++WT ++ GY Q N+ +A K+F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
D + V++ ++L G + N I+ ++ + +I CN+++ +
Sbjct: 227 -----DVMPEKTEVSWTSMLMGYVQ----NGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
+ ARRVF M +++ S+ +I + G EA+ LF+ MQ G +P+ T +
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 181 LSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDG 240
LS LA + G+QVHA +V+ F +V+VA+ L+ +Y K +V+++ +F P D
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 241 VSYNVMITCYAWNEQYKESLKLFRELQFTRFDR-SQFPFSTLLSVVANKLDLQIGRQIHT 299
+ +N +I+ YA + +E+LK+F E+ + + ++ F LS + ++ G +I+
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 300 QTIVTTAISEVKVANS-LVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL 357
+ + + +VDM + GRF EA E+ +++ W +++ A
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA------- 510
Query: 358 EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSAL 417
CR + D A F + + E+ + G + +SN
Sbjct: 511 ----------CRTHSQLDVAEFCA--KKLIEIEPENSGTYI--------LLSN------- 543
Query: 418 LDMYAKSGSLKDAIQTFKEMPERNI-----VSWNAL---ISACAQNG-----DAQATLKS 464
MYA G D + K M R + SW + + A + G + ++ LK
Sbjct: 544 --MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 465 FED----MVQSGYQPD 476
++ + ++GY PD
Sbjct: 602 LDELDGLLREAGYNPD 617
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/594 (38%), Positives = 337/594 (56%), Gaps = 34/594 (5%)
Query: 190 IALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITC 249
+ + +HA +VK V+ +AN L+++Y K A ++F EMP D +++ ++T
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 250 YAWNEQYKESLKLFRELQFTRFDRSQ-FPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
++L +F + + R F FS L+ AN + GRQ+H IV+ +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 309 EVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLF---- 364
+ V +SLVDMYAKCG AK +F ++ +T+ WTAM+S Y + G EEAL LF
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 365 ---------------------------IEMCRANISA-DQATFASILRASAELASLSLGK 396
EM R + D +SI+ A A LA+ G+
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
Q+H VI GF S VF +AL+DMYAK + A F M R++VSW +LI AQ+G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHY 516
A+ L ++DMV G +P+ V+ + ++ ACSH G +E+G + F SMT+ Y +RP +HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 517 ASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEK 576
++D+L RSG DEAE L+ MPF PDE W++++++C+ + + AD L K
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 577 LRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELH 636
L+D + Y+ +SNIYA A W VS+ ++ + E VRK +S VE++ + VF A + H
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Query: 637 PQTNEIRRKIENLMQEMK-KEGYKPDTSCALHDEDEEIKVESLKYHSERLAIAFALINTP 695
P +I R ++ L +EM+ + GY PDTS LHD DE+ K + L +HSER A+A+ L+
Sbjct: 499 PLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAV 558
Query: 696 EGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
G+PI ++KNLR C DCH +K IS+IT REI VRD++R+HHFK G CSC DFW
Sbjct: 559 PGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 216/459 (47%), Gaps = 38/459 (8%)
Query: 83 CSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSF 142
C+ T +HA I+K G + N+LV+ Y K A +VF EMP +D +++
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 143 NALITGFAKEGLNEEAIKLFVEMQHLG-FKPSDFTFAAALSAGVGLADIALGRQVHAFVV 201
+++T + L+ + + +F + +P DF F+A + A L I GRQVH +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 202 KTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLK 261
+ + + V ++L+D+Y+K + A+ +F + + +S+ M++ YA + + +E+L+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 262 LFRELQ--------------------------FTRFDRSQ------FPFSTLLSVVANKL 289
LFR L FT R + S+++ AN
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 290 DLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMIS 349
GRQ+H I S V ++N+L+DMYAKC AK+IF+ + H V WT++I
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 350 AYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSGFM 408
Q G E+AL L+ +M + ++ TF ++ A + + + G++L S G
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 409 SNVFSGSALLDMYAKSGSLKDAIQTFKEMP-ERNIVSWNALISACAQNGDAQATLKSFED 467
++ + LLD+ +SG L +A MP + +W AL+SAC + G Q ++ +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 468 MVQSG--YQPDSVSLLS-VLSACSHCGLIEEGLQYFNSM 503
+V S P + LLS + ++ S G + E + M
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 197/416 (47%), Gaps = 36/416 (8%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N L++ Y K G + A ++F+ M R ++W ++ +Q N + +F + + G
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
PD F+ L+ C+ + + QVH I Y + ++ +SLVD Y K L+ A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 130 VFKEMPQKDSVSFNALITGFAKEGLNEEAIKLF--VEMQHL--------GFKPS------ 173
VF + K+++S+ A+++G+AK G EEA++LF + +++L GF S
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 174 ------------DFTFAAALSAGVG----LADIALGRQVHAFVVKTNFVENVFVANALLD 217
D LS+ VG LA GRQVH V+ F VF++NAL+D
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
+Y+K V+ A+ +F M D VS+ +I A + Q +++L L+ ++ ++
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEAKEIFANL 336
F L+ ++ ++ GR++ I ++ L+D+ + G +EA+ + +
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 337 SHISTVP-WTAMISAYVQKGNLEEALNLFIEMCRANISADQATFA--SILRASAEL 389
P W A++SA ++G + + + + + D +T+ S + ASA L
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 1/234 (0%)
Query: 4 QNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDM 63
+NT+S ++SGY KSG A ELF + + SWT LI G+ Q + EAF +F +M
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 64 RTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRC 123
R + D + ++++ C+ + QVH +I G++S + I N+L+D Y K
Sbjct: 229 RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD 288
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA 183
+ A+ +F M +D VS+ +LI G A+ G E+A+ L+ +M G KP++ TF + A
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 184 GVGLADIALGRQVHAFVVKTNFVENVFVA-NALLDLYSKHDCVVEARKLFGEMP 236
+ + GR++ + K + LLDL + + EA L MP
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 12/232 (5%)
Query: 282 LSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHIST 341
L + A L + +H + + +AN+LV++Y KCG A ++F + H
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 342 VPWTAMISAYVQKGNL--EEALNLFIEMCRANISADQATFASILRASAELASLSLGKQLH 399
+ W ++++A + + NL + + + D F+++++A A L S+ G+Q+H
Sbjct: 70 IAWASVLTA-LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 400 SFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQ 459
I S + ++ S+L+DMYAK G L A F + +N +SW A++S A++G +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 460 ATLKSFEDM-VQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLR 510
L+ F + V++ Y S +++S G +GL+ F+ T+ + R
Sbjct: 189 EALELFRILPVKNLY-----SWTALISGFVQSG---KGLEAFSVFTEMRRER 232
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 117/234 (50%), Gaps = 18/234 (7%)
Query: 383 LRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNI 442
L+ A +L+ K LH+ +++ G + + L+++Y K G+ A+Q F EMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 443 VSWNALISACAQNGDAQATL-KSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQ-YF 500
++W ++++A Q + TL SG +PD +++ AC++ G I+ G Q +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 501 NSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKN 560
+ + +Y + +S+VD+ + G + A+ + + + + I W+++++
Sbjct: 130 HFIVSEYA--NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG------ 180
Query: 561 LEFAKKA----ADQLFKMEKLRDAAPYVAMSNIYAVAGQ-WESVSQVKKAMRER 609
+AK A +LF++ +++ + A+ + + +G+ E+ S + RER
Sbjct: 181 --YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/698 (33%), Positives = 383/698 (54%), Gaps = 43/698 (6%)
Query: 91 ELIQVHADIIKFG-----YNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDSVSFNAL 145
+L Q H +I+ G Y++ + + + S+ L+ AR+VF E+P+ +S ++N L
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS---LEYARKVFDEIPKPNSFAWNTL 101
Query: 146 ITGFAKEGLNEEAIKLFVEM-QHLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTN 204
I +A +I F++M P+ +TF + A ++ ++LG+ +H VK+
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 205 FVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFR 264
+VFVAN+L+ Y + A K+F + E D VS+N MI + ++L+LF+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 265 ELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCG 324
+++ S +LS A +L+ GRQ+ + + +AN+++DMY KCG
Sbjct: 222 KMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCG 281
Query: 325 RFEEAKEIFANLSHISTVPWT-------------------------------AMISAYVQ 353
E+AK +F + V WT A+ISAY Q
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 354 KGNLEEALNLFIEM-CRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
G EAL +F E+ + N+ +Q T S L A A++ +L LG+ +HS++ + G N
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSG 472
SAL+ MY+K G L+ + + F + +R++ W+A+I A +G + F M ++
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 473 YQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
+P+ V+ +V ACSH GL++E F+ M Y + P+++HYA +VD+L RSG ++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 533 EKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAV 592
K + MP P +W +++ +C+IH NL A+ A +L ++E D A +V +SNIYA
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA-HVLLSNIYAK 580
Query: 593 AGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQE 652
G+WE+VS+++K MR G++K S +E+ +H F + D HP + ++ K+ +M++
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 653 MKKEGYKPDTSCALH-DEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 711
+K GY+P+ S L E+EE+K +SL HSE+LAI + LI+T I V+KNLR C D
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700
Query: 712 CHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDFW 749
CH+ KLIS++ REI VRD RFHHF++G CSC DFW
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 224/467 (47%), Gaps = 34/467 (7%)
Query: 20 GNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDPDYVTFATL 79
+L AR++F+ + + +W LI Y+ + F+DM ++ P+ TF L
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 80 LSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVFKEMPQKDS 139
+ +E + + +H +K S + + NSL+ Y LD A +VF + +KD
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 140 VSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIALGRQVHAF 199
VS+N++I GF ++G ++A++LF +M+ K S T LSA + ++ GRQV ++
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 200 VVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYK-- 257
+ + N+ +ANA+LD+Y+K + +A++LF M E D V++ M+ YA +E Y+
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 258 -----------------------------ESLKLFRELQFTR-FDRSQFPFSTLLSVVAN 287
E+L +F ELQ + +Q + LS A
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 288 KLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAM 347
L++GR IH+ V ++L+ MY+KCG E+++E+F ++ W+AM
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 348 ISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGKQL-HSFVIRSG 406
I G EA+++F +M AN+ + TF ++ A + + + L H G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 407 FMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVS-WNALISAC 452
+ + ++D+ +SG L+ A++ + MP S W AL+ AC
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 174/385 (45%), Gaps = 35/385 (9%)
Query: 10 NMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGS 69
N LI Y G+L +A ++F ++ ++ VSW +I G+ QK +A +LF M ++
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DV 228
Query: 70 DPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARR 129
+VT +LS C++ QV + I + N L + N+++D Y K ++ A+R
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 130 VF-------------------------------KEMPQKDSVSFNALITGFAKEGLNEEA 158
+F MPQKD V++NALI+ + + G EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 159 IKLFVEMQ-HLGFKPSDFTFAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLD 217
+ +F E+Q K + T + LSA + + LGR +H+++ K N V +AL+
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 218 LYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFP 277
+YSK + ++R++F + + D ++ MI A + E++ +F ++Q +
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 278 FSTLLSVVANKLDLQIGRQIHTQTIVTTAI-SEVKVANSLVDMYAKCGRFEEA-KEIFAN 335
F+ + ++ + + Q I E K +VD+ + G E+A K I A
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 336 LSHISTVPWTAMISAYVQKGNLEEA 360
ST W A++ A NL A
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLA 553
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
M ++ V+ ++ GY S + ARE+ NSM + V+W LI Y Q + EA +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 61 VDMRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCK 120
+++ + +T + LS C++ +H+ I K G + ++L+ Y K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 121 IRCLDLARRVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAA 180
L+ +R VF + ++D ++A+I G A G EA+ +F +MQ KP+ TF
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 181 LSA--GVGLADIA 191
A GL D A
Sbjct: 473 FCACSHTGLVDEA 485
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 46/260 (17%)
Query: 391 SLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKS--GSLKDAIQTFKEMPERNIVSWNAL 448
SL KQ H +IR+G S+ +S S L M A S SL+ A + F E+P+ N +WN L
Sbjct: 42 SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 449 ISACAQNGDAQATLKSFEDMV----------------QSGYQPDSVSL------LSVLSA 486
I A A D ++ +F DMV ++ + S+SL ++V SA
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 487 CS--------------HCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEA 532
CG ++ + F ++ +K + + SM++ + G D+A
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS-----WNSMINGFVQKGSPDKA 216
Query: 533 EKLMAQMPFE---PDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNI 589
+L +M E + V+++C +NLEF ++ + + + AM ++
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 590 YAVAGQWESVSQVKKAMRER 609
Y G E ++ AM E+
Sbjct: 277 YTKCGSIEDAKRLFDAMEEK 296
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 347/559 (62%), Gaps = 6/559 (1%)
Query: 193 GRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAW 252
G Q+H +VVK+ VAN L++ YSK ++R+ F + P+ +++ +I+C+A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 253 NEQYKESLKLFRELQFT--RFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEV 310
NE SL+ +++ R D P +T + ++ D IGR +H ++ T ++V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD--IGRSVHCLSMKTGYDADV 151
Query: 311 KVANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRA 370
V +SLVDMYAKCG A+++F + + V W+ M+ Y Q G EEAL LF E
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 371 NISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDA 430
N++ + +F+S++ A L LG+Q+H I+S F S+ F GS+L+ +Y+K G + A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 431 IQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHC 490
Q F E+P +N+ WNA++ A AQ+ Q ++ F+ M SG +P+ ++ L+VL+ACSH
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 491 GLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSS 550
GL++EG YF+ M + ++ P +HYAS+VD+L R+G EA +++ MP +P E +W +
Sbjct: 332 GLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 551 VINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERG 610
++ SC +HKN E A AAD++F++ + + ++++SN YA G++E ++ +K +R+RG
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPV-SSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 611 VRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDED 670
+K T SWVE ++KVH F A + H ++ EI K+ L +EM+K GY DTS L + D
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 671 EEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVR 730
+ K ++++YHSERLAIAF LI P PI VMKNLR C DCH AIK +S T R I VR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 731 DSSRFHHFKDGFCSCRDFW 749
D++RFH F+DG CSC D+W
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 209/382 (54%), Gaps = 1/382 (0%)
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
+Y LL + + + +Q+H ++K G + I ++ N+L++ Y K + +RR F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
++ PQK S +++++I+ FA+ L +++ +M +P D +A + L+
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
+GR VH +KT + +VFV ++L+D+Y+K +V ARK+F EMP+ + V+++ M+ YA
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
+ +E+L LF+E F + + FS+++SV AN L++GRQIH +I ++ S
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
V +SLV +Y+KCG E A ++F + + W AM+ AY Q + ++ + LF M +
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 372 ISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAI 431
+ + TF ++L A + + G+ + S ++L+DM ++G L++A+
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 432 QTFKEMPERNIVS-WNALISAC 452
+ MP S W AL+++C
Sbjct: 374 EVITNMPIDPTESVWGALLTSC 395
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+ Y K G + AR++F+ M R V+W+ ++ GY+Q + EA LF + + +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
DY +F++++S C+ Q+H IK ++S + +SLV Y K + A +VF
Sbjct: 217 DY-SFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSA--GVGLAD 189
E+P K+ +NA++ +A+ ++ I+LF M+ G KP+ TF L+A GL D
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 382 ILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERN 441
+L +SA S G QLH +V++SG + L++ Y+KS D+ + F++ P+++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 442 IVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFN 501
+W+++IS AQN +L+ + M+ +PD L S +C+ + G + +
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG-RSVH 139
Query: 502 SMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVI 552
++ K +S+VD+ + G A K+ +MP + + + WS ++
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMM 189
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 12 LISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGGSDP 71
L+S Y K G A ++FN + + W ++ Y+Q + ++ +LF M+ G P
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKP 316
Query: 72 DYVTFATLLSGCSEPDTANE 91
+++TF +L+ CS +E
Sbjct: 317 NFITFLNVLNACSHAGLVDE 336
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/628 (36%), Positives = 371/628 (59%), Gaps = 50/628 (7%)
Query: 124 LDLARRVFKEMPQKDSVSFNALITGFAKEGLNE-EAIKLFVEMQHLGFKPSDFTFAAALS 182
+D A RVF M K+++++N+L+ G +K+ EA +LF E+ +P F++
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSY----- 127
Query: 183 AGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVS 242
N +L Y ++ +A+ F MP D S
Sbjct: 128 ------------------------------NIMLSCYVRNVNFEKAQSFFDRMPFKDAAS 157
Query: 243 YNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTI 302
+N MIT YA + +++ REL ++ ++++ ++ ++S DL+ +
Sbjct: 158 WNTMITGYARRGEMEKA----RELFYSMMEKNEVSWNAMISGYIECGDLEKA----SHFF 209
Query: 303 VTTAISEVKVANSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNLEEAL 361
+ V +++ Y K + E A+ +F +++ + + V W AMIS YV+ E+ L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 362 NLFIEMCRANISADQATFASILRASAELASLSLGKQLHSFVIRSGFMSNVFSGSALLDMY 421
LF M I + + +S L +EL++L LG+Q+H V +S ++V + ++L+ MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 422 AKSGSLKDAIQTFKEMPERNIVSWNALISACAQNGDAQATLKSFEDMVQSGYQPDSVSLL 481
K G L DA + F+ M ++++V+WNA+IS AQ+G+A L F +M+ + +PD ++ +
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 482 SVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPF 541
+VL AC+H GL+ G+ YF SM + YK+ P+ +HY MVD+L R+G +EA KL+ MPF
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 542 EPDEIMWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQ 601
P ++ +++ +CR+HKN+E A+ AA++L ++ ++AA YV ++NIYA +WE V++
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS-QNAAGYVQLANIYASKNRWEDVAR 508
Query: 602 VKKAMRERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
V+K M+E V KV YSW+E+++KVH F ++D +HP+ + I +K++ L ++MK GYKP+
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPE 568
Query: 662 TSCALHDEDEEIKVESLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKLISK 721
ALH+ +EE K + L +HSE+LA+AF I P+GS I V KNLR C DCH AIK IS+
Sbjct: 569 LEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISE 628
Query: 722 ITGREITVRDSSRFHHFKDGFCSCRDFW 749
I REI VRD++RFHHFKDG CSC D+W
Sbjct: 629 IEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 219/451 (48%), Gaps = 58/451 (12%)
Query: 1 MPNQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLF 60
+P +T S N+++S YV++ N A+ F+ M + A SW +I GY+++ + +A +LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 61 VDMRTDGGSDPDYVTFATLLSG---CSEPDTANELIQVHADIIKFGYNSILIICNSLVDS 117
M + + V++ ++SG C + + A+ +V A + ++ +++
Sbjct: 179 YSM-----MEKNEVSWNAMISGYIECGDLEKASHFFKV-APV------RGVVAWTAMITG 226
Query: 118 YCKIRCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFT 176
Y K + ++LA +FK+M K+ V++NA+I+G+ + E+ +KLF M G +P+
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 177 FAAALSAGVGLADIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMP 236
++AL L+ + LGRQ+H V K+ +V +L+ +Y K + +A KLF M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 237 EVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQ 296
+ D V++N MI+ YA + ++L LFRE+ + F +L + + IG
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG-M 405
Query: 297 IHTQTIVTTAISEVKVAN--SLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQK 354
+ +++V E + + +VD+ + G+ EEA L I ++P+ + +
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA------LKLIRSMPFRPHAAVF--- 456
Query: 355 GNLEEALNLFIEMCRANISADQATFAS--ILRASAELASLSLGKQLHSFVIRSGFMSNVF 412
G L A CR + + + A FA+ +L+ +++ A +G++
Sbjct: 457 GTLLGA-------CRVHKNVELAEFAAEKLLQLNSQNA--------------AGYVQ--- 492
Query: 413 SGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
L ++YA +D + K M E N+V
Sbjct: 493 ----LANIYASKNRWEDVARVRKRMKESNVV 519
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 402 VIRSGFMS------NVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQN 455
++RS +++ +F + ++ +SG + A++ F M +N ++WN+L+ +++
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 456 GDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYKLRPKKEH 515
D + +PD+ S +LS E+ +F+ M K
Sbjct: 106 PSRMMEAHQLFDEIP---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-----DAAS 157
Query: 516 YASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAADQLFKME 575
+ +M+ R G ++A +L M E +E+ W+++I+ +LE A FK+
Sbjct: 158 WNTMITGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLE----KASHFFKVA 212
Query: 576 KLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
+R + AM Y A + E + K M
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 331/541 (61%), Gaps = 6/541 (1%)
Query: 209 VFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQF 268
+F+ N L+++Y K + + +A +LF +MP+ + +S+ MI+ Y+ + ++++L+L +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 269 TRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVKVANSLVDMYAKCGRFEE 328
+ + +S++L D+ R +H I S+V V ++L+D++AK G E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 329 AKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRANISADQATFASILRASAE 388
A +F + + W ++I + Q + AL LF M RA A+QAT S+LRA
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 389 LASLSLGKQLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNAL 448
LA L LG Q H +++ + ++ +AL+DMY K GSL+DA++ F +M ER++++W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 449 ISACAQNGDAQATLKSFEDMVQSGYQPDSVSLLSVLSACSHCGLIEEGLQYFNSMTQKYK 508
IS AQNG +Q LK FE M SG +P+ ++++ VL ACSH GL+E+G YF SM + Y
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 509 LRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEIMWSSVINSCRIHKNLEFAKKAA 568
+ P +EHY M+D+L ++G D+A KL+ +M EPD + W +++ +CR+ +N+ A+ AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 569 DQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAMRERGVRKVTAYSWVELKSKVHV 628
++ ++ DA Y +SNIYA + +W+SV +++ MR+RG++K SW+E+ ++H
Sbjct: 451 KKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 629 FTANDELHPQTNEIRRKIENLMQEMKKEGYKPDTSCALHDEDEEIKVESLKYHSERLAIA 688
F D HPQ E+ +K+ L+ + GY P+T+ L D + E +SL++HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569
Query: 689 FALINTPEGSPILVMKNLRACTDCHAAIKLISKITGREITVRDSSRFHHFKDGFCSCRDF 748
F L+ P I + KNLR C DCH KL SK+ R I +RD R+HHF+DG CSC D+
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 749 W 749
W
Sbjct: 630 W 630
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 197/390 (50%), Gaps = 21/390 (5%)
Query: 72 DYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLARRVF 131
D T++ L+ C +E + + G+ ++ + N L++ Y K L+ A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 132 KEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLADIA 191
+MPQ++ +S+ +I+ ++K ++++A++L V M +P+ +T+++ L + G++D+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 192 LGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYA 251
R +H ++K +VFV +AL+D+++K +A +F EM D + +N +I +A
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 252 WNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAISEVK 311
N + +L+LF+ ++ F Q +++L L++G Q H + ++
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH--IVKYDQDLI 294
Query: 312 VANSLVDMYAKCGRFEEAKEIFANLSHISTVPWTAMISAYVQKGNLEEALNLFIEMCRAN 371
+ N+LVDMY KCG E+A +F + + W+ MIS Q G +EAL LF M +
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 372 ISADQATFASILRASAELASLSLG-------KQLHSF-VIRSGFMSNVFSGSALLDMYAK 423
+ T +L A + L G K+L+ +R + ++D+ K
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY-------GCMIDLLGK 407
Query: 424 SGSLKDAIQTFKEMP-ERNIVSWNALISAC 452
+G L DA++ EM E + V+W L+ AC
Sbjct: 408 AGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 37/460 (8%)
Query: 9 TNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVDMRTDGG 68
N+LI+ YVK L A +LF+ M R +SWT +I YS+ ++A +L V M D
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN- 157
Query: 69 SDPDYVTFATLLSGCSEPDTANELIQVHADIIKFGYNSILIICNSLVDSYCKIRCLDLAR 128
P+ T++++L C + +++ +H IIK G S + + ++L+D + K+ + A
Sbjct: 158 VRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 129 RVFKEMPQKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSDFTFAAALSAGVGLA 188
VF EM D++ +N++I GFA+ ++ A++LF M+ GF T + L A GLA
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 189 DIALGRQVHAFVVKTNFVENVFVANALLDLYSKHDCVVEARKLFGEMPEVDGVSYNVMIT 248
+ LG Q H +VK + +++ + NAL+D+Y K + +A ++F +M E D ++++ MI+
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 249 CYAWNEQYKESLKLFRELQFTRFDRSQFPFSTLLSVVANKLDLQIGRQIHTQTIVTTAIS 308
A N +E+LKLF ++ + + +L ++ L+ G I
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 309 EVKVA-NSLVDMYAKCGRFEEAKEIFANLS-HISTVPWTAMISAYVQKGNL---EEALNL 363
V+ ++D+ K G+ ++A ++ + V W ++ A + N+ E A
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 364 FIEM---------CRANISADQATFASI-----------LRASAELASLSLGKQLHSFVI 403
I + +NI A+ + S+ ++ + + + KQ+H+F+I
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 404 RSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIV 443
S ++++ K L + +PE N V
Sbjct: 513 GDN------SHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 151/355 (42%), Gaps = 51/355 (14%)
Query: 340 STVPWTAMISAYVQ---KGNLEEALNLFIEMCRANISADQATFASILRASAELASLSLGK 396
S+ T ++S + + + +L A+ + + AD AT++ +++ ++ G
Sbjct: 22 SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN 81
Query: 397 QLHSFVIRSGFMSNVFSGSALLDMYAKSGSLKDAIQTFKEMPERNIVSWNALISACAQNG 456
+ + +G +F + L++MY K L DA Q F +MP+RN++SW +ISA ++
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 457 DAQATLKSFEDMVQSGYQPDSVSLLSVLSACS--------HCGLIEEGLQ----YFNSMT 504
Q L+ M++ +P+ + SVL +C+ HCG+I+EGL+ +++
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 505 QKYKLRPKKEHYASMVDILC------------------RSGCFDEAEKLMAQMPFEPDEI 546
+ + E S+ D + RS E K M + F ++
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 547 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYVAMSNIYAVAGQWESVSQVKKAM 606
+SV+ +C LE +A + K ++ D A+ ++Y G E +V M
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 607 RERGVRKVTAYSWVELKSKVHVFTANDELHPQTNEIRRKIENLMQEMKKEGYKPD 661
+ER V +W + S + N ++ L + MK G KP+
Sbjct: 320 KERDV-----ITWSTMISGL-----------AQNGYSQEALKLFERMKSSGTKPN 358
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 42/312 (13%)
Query: 3 NQNTVSTNMLISGYVKSGNLATARELFNSMVDRTAVSWTILIGGYSQKNQFREAFKLFVD 62
+Q+ + N L+ Y K G+L A +FN M +R ++W+ +I G +Q +EA KLF
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 63 MRTDGGSDPDYVTFATLLSGCSEPDTANELIQVHADIIK-FGYNSILIICNSLVDSYCKI 121
M++ G+ P+Y+T +L CS + + K +G + + ++D K
Sbjct: 350 MKS-SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 122 RCLDLARRVFKEMP-QKDSVSFNALITGFAKEGLNEEAIKLFVEMQHLGFKPSD---FTF 177
LD A ++ EM + D+V++ L+ G + N + + + + P D +T
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRN-MVLAEYAAKKVIALDPEDAGTYTL 466
Query: 178 AAALSA------------------GV----GLADIALGRQVHAFVVKTNFVENVFVANAL 215
+ + A G+ G + I + +Q+HAF++ N +
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI------ 520
Query: 216 LDLYSKHDCVVEARKLFGEMPEVDGVSYNVMITCYAWNEQYKESLKLFRELQFTRFDRSQ 275
+++ K + ++ G +PE + V ++ EQ ++SL+ E F
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLE------GEQMEDSLRHHSEKLALAFGLMT 574
Query: 276 FPFSTLLSVVAN 287
P ++ + N
Sbjct: 575 LPIEKVIRIRKN 586
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,394,276
Number of Sequences: 539616
Number of extensions: 9993242
Number of successful extensions: 40963
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 29246
Number of HSP's gapped (non-prelim): 3013
length of query: 749
length of database: 191,569,459
effective HSP length: 125
effective length of query: 624
effective length of database: 124,117,459
effective search space: 77449294416
effective search space used: 77449294416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)