Your job contains 1 sequence.
>004490
MVMDQRLSGFYGSVNQYKLNDETFSVLSDQNLVIGFKTNDTLVSQSYLDIQALPPNPVAD
SPNSSSVVTQERDSSEDYDFSDVVLKYINEMLMEEDMEEKTCMFQESSAALQAAEKSLYE
LLGEKYPPQPSYVNKKFVDHDHESPDGTHDSSNSYCNTSTISAESDNLVDHGWNSDLSEC
KFSNFSSQSTPQSSYGSSSSNSNVVDGFIDSPVSSLKIPEIFRDSESALQFKRGFEEASK
FLPNGNALFVDLKNNVSVVKELKEEPKSVLVRMGKKPENENSPEGSRGKKNPHPEEVSLE
RGRSNKQSAVSTESTVSEEMFDMILLNCGQSESVLREALQNETSKNVRQNKQSRGSKGGK
ARGRKQGGNRDVVDLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFA
DGLEARLAGSGTQIYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKA
TRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAK
YAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVL
NLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIERE
IFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKD
FVIDEDSQWLLQGWKGRIVYALSTWKPSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004490
(749 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 1355 5.9e-161 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 1453 7.9e-149 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 1194 1.4e-129 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 1122 2.4e-125 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 1122 4.0e-123 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 600 1.9e-58 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 573 6.1e-58 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 572 1.8e-55 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 532 3.1e-51 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 498 1.2e-47 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 493 4.2e-47 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 483 6.2e-46 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 468 3.6e-44 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 292 1.4e-43 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 457 6.5e-43 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 467 8.8e-43 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 445 1.5e-41 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 422 5.3e-39 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 333 2.0e-33 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 350 4.0e-31 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 362 3.0e-30 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 354 7.6e-30 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 364 7.9e-30 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 304 3.8e-25 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 296 2.3e-24 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 236 1.6e-16 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 200 1.0e-12 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 167 2.1e-11 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 191 2.1e-11 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 186 7.1e-11 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 182 1.6e-10 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 165 9.0e-09 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 160 2.9e-08 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 105 9.2e-05 1
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 1355 (482.0 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
Identities = 281/527 (53%), Positives = 358/527 (67%)
Query: 234 GFEEASKF-LPNGNALFVDLKNNVSVVKELKEEPKSVLVRMGKKPENENSPEGSRGKKNP 292
G +E+SK N ++++ + + E ++V EN S+ +KN
Sbjct: 197 GIDESSKNNRENHQSVWL-FRREIEEANRFNPEENELIVNF----REENCV--SKARKNS 249
Query: 293 HPEEVSLERGRSNKQSAXXXXXXXXXXMFDMILLNCGQSESV-----LREALQNETSKNV 347
+E+ +E RS+K A + D IL++ ES+ LR+ L+ K
Sbjct: 250 SRDEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGESMKEFNALRDVLKKGVEKKK 309
Query: 348 -------RQNXXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNAYELLKQ 400
++ +VVDLR+LL CAQAVAA+DRR A +LLKQ
Sbjct: 310 ASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQ 369
Query: 401 IRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLKAYHLFLAACP 460
IR HS+ GDG QR+A CFA+GLEARLAG+G+QIY ++SK SAA VLKA+ LFLA CP
Sbjct: 370 IRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCP 429
Query: 461 FRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITGIDL 520
FRKLS F +NKTI +L + R+H+IDFGI+YGFQWP LI R S G+PK+RITGI+
Sbjct: 430 FRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEF 487
Query: 521 PQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNCLY 580
PQPGF+PA+RVEETG+RLA YA+ F VPFE+ AIA+KWD IQ+EDL+ID E+ VVNCLY
Sbjct: 488 PQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLY 547
Query: 581 RFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTLF 640
R NL DE+V V+ R+ VLNLI K+NPD+FV GIVNGA++APFF+TRFREALF +S++F
Sbjct: 548 RAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIF 607
Query: 641 DMLETNVPREIPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLP 700
DMLET VPRE ERM +E E+FGREA+NVIACEG ER+ERPETYKQW VR MR+G Q+P
Sbjct: 608 DMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVP 667
Query: 701 LNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKGRIVYALSTWKP 747
+ IMK + +V T YHKDFVID+D++WLLQGWKGR V ALS WKP
Sbjct: 668 FDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
Score = 234 (87.4 bits), Expect = 5.9e-161, Sum P(2) = 5.9e-161
Identities = 60/149 (40%), Positives = 86/149 (57%)
Query: 1 MVMDQRLSGFYGSVNQYKLNDETFSVLSDQNLVIGFKTNDTLVSQSYLDIQALPPNPVAD 60
M+ + L+G G VN+ +L S L DQ F T TL ++ + N V
Sbjct: 1 MITEPSLTGISGMVNRNRL-----SGLPDQPSSHSF-TPVTLYDGFNYNLSSDHINTVVA 54
Query: 61 SPNSSSVVTQER---DSSEDYDFSDVVLKYINEMLMEEDMEEKTCMFQESSAALQAAEKS 117
+P +S + +E D ++D+DFSD VL YI++ML EEDM++K CM QES L+AAE+S
Sbjct: 55 APENSVFIREEEEEEDPADDFDFSDAVLGYISQMLNEEDMDDKVCMLQES-LDLEAAERS 113
Query: 118 LYELLGEKYPPQPSYVNKKFVDHDHESPD 146
LYE +G+KYPP P N F + + E+ D
Sbjct: 114 LYEAIGKKYPPSPER-NLAFAERNSENLD 141
Score = 60 (26.2 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 226 ESALQFKRGFEEASKFLPNGNALFVDLKNNVSVVKELKEEPK 267
+S F+R EEA++F P N L V+ + V K K +
Sbjct: 210 QSVWLFRREIEEANRFNPEENELIVNFREENCVSKARKNSSR 251
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 293/556 (52%), Positives = 382/556 (68%)
Query: 207 GFIDSPVSSLKIPEIFRDSESALQFKRGFEEASKFLPNGNALFVDLKNNVSVVKELKEEP 266
GF D VS++ F+D E A+QFK+G EEASKFLP + LF+D+ + + + KE
Sbjct: 218 GFGDDLVSNM-----FKDDELAMQFKKGVEEASKFLPKSSQLFIDVDSYIPMNSGSKENG 272
Query: 267 KSVLVRMGKKPENEN------SPEGSR--GKKNP-HPEEVSLERGRSNKQSAXXXXXXXX 317
V V+ KK E E+ +P +R GKK+ E+ RSNKQSA
Sbjct: 273 SEVFVKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESEL 332
Query: 318 XXMFDMILLNCGQSESV--LREALQNETSKNV--RQNXXXXXXXXXXXXXXXXXXXXDVV 373
MFD IL+ CG + V L + E++K V + N +
Sbjct: 333 SEMFDKILV-CGPGKPVCILNQNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKETA 391
Query: 374 DLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQ 433
DLRTLL LCAQAV+ +DRR A E+L+QIR+HSS G+G +R+A FA+ LEARLAG+GTQ
Sbjct: 392 DLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQ 451
Query: 434 IYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYG 493
IYTAL SK TSAAD+LKAY +++ CPF+K + F+N ++M A +HIIDFGI YG
Sbjct: 452 IYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYG 511
Query: 494 FQWPCLIQRLS-SRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFN 552
FQWP LI RLS SRPGG+PKLRITGI+LPQ GF+PAE V+ETG RLA+Y + VPFE+N
Sbjct: 512 FQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYN 571
Query: 553 AIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFV 612
AIAQKW+TIQ+EDL + GE +VVN L+RFRNLLDETV+V+ PR+ VL LIRK+NP+VF+
Sbjct: 572 AIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFI 631
Query: 613 LGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIAC 672
I++G ++APFF+TRFREALF YS +FDM ++ + RE R++ E+E +GRE +NV+AC
Sbjct: 632 PAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVAC 691
Query: 673 EGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQ 732
EG ER+ERPETYKQWQ R +RAGF QLPL +E+M+ K +++ Y K+F +D++ WLLQ
Sbjct: 692 EGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQ 751
Query: 733 GWKGRIVYALSTWKPS 748
GWKGRIVYA S W PS
Sbjct: 752 GWKGRIVYASSLWVPS 767
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 214/530 (40%), Positives = 286/530 (53%)
Query: 9 GFYGSVNQYKLNDETFSVLSDQNLVIGFKTNDTLVSQSYLDIQAL-PPNPVADSPNSSSV 67
GF GS+++ N + F + N +G N + LD +L PP N+++
Sbjct: 7 GFPGSMDELDFNKD-FDLPPSSNQTLGL-ANGFYLDD--LDFSSLDPPEAYPSQNNNNNN 62
Query: 68 VTQER-------DSSEDYDFSDVVLKYINEMLMEEDMEEKTCMFQESSAALQAAEKSLYE 120
+ + SS+D DFSD VLKYI+++LMEEDMEEK CMF ++ ALQAAEKSLYE
Sbjct: 63 INNKAVAGDLLSSSSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDA-LALQAAEKSLYE 121
Query: 121 LLGEKYPPQPSYVNKKFVDHDH----ESPDGTHDSS--NSYCNTSTI-SAES----DNLV 169
LGEKYP S + VDH +SPDG+ + Y +T+T S++S D L
Sbjct: 122 ALGEKYPSSSSASS---VDHPERLASDSPDGSCSGGAFSDYASTTTTTSSDSHWSVDGLE 178
Query: 170 DH-GWNSDLSECKFXXXXXXXXXXXXXXXXXXXXXVV-DGFIDSPVSSLKIPEIFRDSES 227
+ W F V GF D VS++ F+D E
Sbjct: 179 NRPSWLHTPMPSNFVFQSTSRSNSVTGGGGGGNSAVYGSGFGDDLVSNM-----FKDDEL 233
Query: 228 ALQFKRGFEEASKFLPNGNALFVDLKNNVSVVKELKEEPKSVLVRMGKKPENEN------ 281
A+QFK+G EEASKFLP + LF+D+ + + + KE V V+ KK E E+
Sbjct: 234 AMQFKKGVEEASKFLPKSSQLFIDVDSYIPMNSGSKENGSEVFVKTEKKDETEHHHHHSY 293
Query: 282 SPEGSR--GKKNP-HPEEVSLERGRSNKQSAXXXXXXXXXXMFDMILLNCGQSESV--LR 336
+P +R GKK+ E+ RSNKQSA MFD IL+ CG + V L
Sbjct: 294 APPPNRLTGKKSHWRDEDEDFVEERSNKQSAVYVEESELSEMFDKILV-CGPGKPVCILN 352
Query: 337 EALQNETSKNV--RQNXXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNA 394
+ E++K V + N + DLRTLL LCAQAV+ +DRR A
Sbjct: 353 QNFPTESAKVVTAQSNGAKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTA 412
Query: 395 YELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLKAYHL 454
E+L+QIR+HSS G+G +R+A FA+ LEARLAG+GTQIYTAL SK TSAAD+LKAY
Sbjct: 413 NEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQT 472
Query: 455 FLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLS 504
+++ CPF+K + F+N ++M A +HIIDFGI YGFQWP LI RLS
Sbjct: 473 YMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLS 522
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 1194 (425.4 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
Identities = 234/472 (49%), Positives = 314/472 (66%)
Query: 281 NSPEGSRGKKNPHPEEVSLERGRSNKQSAXXXXXXXXXXM-FDMILLNCGQSESVLREAL 339
+S E R ++ + EE LE R NKQ A + + +LL C ++
Sbjct: 134 SSGESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEE----- 188
Query: 340 QNETSKNVRQNXXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNAYELLK 399
+ E + +Q+ + VDLR+LLT CAQAVA+ D+R A + LK
Sbjct: 189 EEERTVITKQSTPNRAGRAKGSSNKSKTHKTNTVDLRSLLTQCAQAVASFDQRRATDKLK 248
Query: 400 QIRQHSSSTGDGMQRMAECFADGLEARLAGS-GTQIYTALISKHTSAADVLKAYHLFLAA 458
+IR HSSS GDG QR+A FA+ LEAR+ G+ + S TS D+LKAY LF+
Sbjct: 249 EIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHT 308
Query: 459 CPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITGI 518
CP F +NK+I LA KAT+LHI+DFG++YGFQWPCL++ LS RPGG P LR+TGI
Sbjct: 309 CPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGI 368
Query: 519 DLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNC 578
+LPQ GF+P++RVEETGRRL ++ + F VPFEFN IA+KW+TI +++L I+ GE VVNC
Sbjct: 369 ELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNC 428
Query: 579 LYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYST 638
++R + DETV +D PR+ VL L R +NPD+FV +NG +++PFF+TRFREALF YS+
Sbjct: 429 IHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSS 488
Query: 639 LFDMLETNVPRE--IPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGF 696
LFDM +T + E R L+ERE+ R+AM+VI+CEGAER RPETYKQW+VR +RAGF
Sbjct: 489 LFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGF 548
Query: 697 TQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKGRIVYALSTWKPS 748
++++IMK AKE V YH+DFVID D+ W+LQGWKGR++YA S WKP+
Sbjct: 549 KPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPA 600
Score = 98 (39.6 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 84 VLKYINEMLMEEDMEEKTCMFQESSAALQAAEKSLYELLGEKYPPQP----SYVNKKFVD 139
VLKYIN+MLM+E E ALQAAE+S YE++ ++ P S ++ D
Sbjct: 61 VLKYINDMLMDE---EDFVGISRDDLALQAAERSFYEIIQQQSPESDQNTSSSSDQNSGD 117
Query: 140 HDHESPDGTHDSS 152
D P T DSS
Sbjct: 118 QDFCFPSTTTDSS 130
Score = 42 (19.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 10 FYGSVNQYKLNDETFSVLSDQNLVIGFKTNDTLVSQ 45
F+ S NQ ND +V D + V+ + ND L+ +
Sbjct: 38 FHESQNQSSPNDSPPTVCLDNSPVLKY-INDMLMDE 72
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 1122 (400.0 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 232/470 (49%), Positives = 311/470 (66%)
Query: 280 ENSPEGSRGKKN-PHPEEVSLERGRSNKQSAXXXXXXXXXXMFDMILLNCGQSESVLREA 338
E S E +R ++ E+ LE GR +K A F+ +LL C +++ EA
Sbjct: 127 EVSEESTRRYRHRDDDEDDDLESGRKSKLPAISTVDELAEK-FEEVLLVCQKNDQ--GEA 183
Query: 339 LQNETSKNVRQNXXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNAYELL 398
+ +T ++V+ + VD+R LL CAQAVA+ D+R A+E L
Sbjct: 184 TEKKT-RHVKGSSNRYKQQKSD----------QPVDMRNLLMQCAQAVASFDQRRAFEKL 232
Query: 399 KQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLKAYHLFLAA 458
K+IR+HSS GD QR+ FA+ LEAR+ G+ T +A S+ TS D+LKAY F+ A
Sbjct: 233 KEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSSR-TSMVDILKAYKGFVQA 291
Query: 459 CPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITGI 518
CP + F +N+TI LA KAT LHIIDFGI+YGFQWPCLIQ LS R G P LR+TGI
Sbjct: 292 CPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGI 351
Query: 519 DLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNC 578
+LPQ GF+P+ERVEETGRRL ++ + F VPFE++ IA+ W+ I ++DL I+SGE VVNC
Sbjct: 352 ELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNC 411
Query: 579 LYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYST 638
+ R + DETV ++ PR+ L L R +NPD+FV +NG +++PFF+TRFREALF S+
Sbjct: 412 ILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSS 471
Query: 639 LFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQ 698
LFDM ET + + R L+ERE+ R+AM+VIACEG+ER RPETYKQWQVR +RAGF
Sbjct: 472 LFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRP 531
Query: 699 LPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKGRIVYALSTWKPS 748
L+++I+K KE V YHKDFVID D+ W+ QGWKGR++YA+S WKP+
Sbjct: 532 AKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPA 581
Score = 130 (50.8 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
Identities = 38/99 (38%), Positives = 56/99 (56%)
Query: 84 VLKYINEMLMEEDMEEKTCMFQESSAALQAAEKSLYELLGEKYP-----PQPSYVNKKFV 138
V KYIN+MLMEED+E ++CM E S ALQAAE+S +E+L ++ P S N +
Sbjct: 62 VFKYINDMLMEEDLEGQSCML-EDSLALQAAERSFFEVLQDQTPISGDLEDGSLGNFSSI 120
Query: 139 DHDHESPDGTHDSSNSYCNTSTISAESDNLVDHGWNSDL 177
H+ P+ + +S+ Y + E D+L + G S L
Sbjct: 121 TSLHQ-PEVSEESTRRYRHRD--DDEDDDL-ESGRKSKL 155
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 1122 (400.0 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 237/474 (50%), Positives = 310/474 (65%)
Query: 286 SRGKKNPHP---EEVSLERGRS-NKQSAXXXXXXXXXXMFDMILLNCGQSESVLREALQN 341
S+ +KN H EE LE R +KQ A MFD +LL G+ + + E +N
Sbjct: 235 SKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLLDGECDPQIIEDGEN 294
Query: 342 ETSKNVRQNXXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNAYELLKQI 401
+SK + + VD RTLLTLCAQ+V+A D+ A +LL+QI
Sbjct: 295 GSSKALVKKGRAKKKSRA-------------VDFRTLLTLCAQSVSAGDKITADDLLRQI 341
Query: 402 RQHSSSTGDGMQRMAECFADGLEARLAGS-GTQI---YTALISKHTSAADVLKAYHLFLA 457
R+ S GD QR+A FA+ LEARL GS GT I Y ++ SK +AA +LK+Y +FL+
Sbjct: 342 RKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLS 401
Query: 458 ACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITG 517
A PF L FFSNK I++ A+ A+ LHI+DFGI+YGFQWP IQ LS G KLRITG
Sbjct: 402 ASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITG 461
Query: 518 IDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQK-WDTIQIEDLNIDSGEVLVV 576
I++PQ G +P ER+++TGRRL +Y + F VPFE+NAIA K W+TI++E+ I EVL V
Sbjct: 462 IEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAV 521
Query: 577 NCLYRFRNLLDETV-VVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFF 635
N + RF+NL D DCPR+ L LIR MNP+VF+ VNG+ +APFF TRF+EALF
Sbjct: 522 NAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFH 581
Query: 636 YSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRAG 695
YS LFD+ + +E PER+ E E +GRE MNVIACEG +R+ERPETYKQWQVR +RAG
Sbjct: 582 YSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAG 641
Query: 696 FTQLPLNEEIMKMAKERVDT-NYHKDFVIDEDSQWLLQGWKGRIVYALSTWKPS 748
F Q P+ E++++ +E++ YHKDFV+DEDS W LQGWKGRI+++ S W PS
Sbjct: 642 FKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVPS 695
Score = 144 (55.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 47/136 (34%), Positives = 67/136 (49%)
Query: 212 PVSSLKIPEIFRDSESALQFKRGFEEASKFLPNGNALFVDLKNNVSVVKELK-EEPKSVL 270
P + + + +F D+ES LQFKRG EEASKFLPN + +L+ + V +K EE S +
Sbjct: 175 PANEILVRSMFSDAESVLQFKRGLEEASKFLPNTDQWIFNLEPEMERVVPVKVEEGWSAI 234
Query: 271 VRMGKKPENENSPEGSRGKKNPHPEEVSLERGRS-NKQSAXXXXXXXXXXMFDMILLNCG 329
K +N + E EE LE R +KQ A MFD +LL G
Sbjct: 235 ---SKTRKNHHERE---------EEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLLDG 282
Query: 330 QSESVLREALQNETSK 345
+ + + E +N +SK
Sbjct: 283 ECDPQIIEDGENGSSK 298
Score = 109 (43.4 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 75 SEDYDFSDVVLKYINEMLMEEDMEEKTCMFQESSAALQAAEKSLYELLGEKYPPQPSYVN 134
+++ D + +LKY+N++LMEE + EK +F +S AL+ E+ L +++ + Q S N
Sbjct: 60 ADEIDSENTLLKYVNQLLMEESLAEKQSIFYDS-LALRQTEEMLQQVISDSQT-QSSIPN 117
Query: 135 KKFVDHDHESPDGTHDSSNSYCNTSTISAESDNLVDH 171
S + D SNS + S++ E++ L D+
Sbjct: 118 NSITT---SSSSNSGDYSNS--SNSSVRIENEVLFDN 149
Score = 40 (19.1 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 62 PNSSSVVTQERDSSEDY-DFSDVVLKYINEMLME 94
PN+S + T +S DY + S+ ++ NE+L +
Sbjct: 116 PNNS-ITTSSSSNSGDYSNSSNSSVRIENEVLFD 148
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 130/375 (34%), Positives = 211/375 (56%)
Query: 374 DLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQ 433
DLR L CA+A++ ND A+ +++++RQ S +G+ +QR+ +GL A+LA SG+
Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSS 177
Query: 434 IYTALISKHTSAADVLKAY-HLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMY 492
IY AL A+ L +Y H+ CP+ K +N I ++ R+HIIDF I
Sbjct: 178 IYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQ 237
Query: 493 GFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFN 552
G QW LIQ ++RPGG P++RITGID + + G RLAK A+ F VPFEFN
Sbjct: 238 GSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFN 297
Query: 553 AIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFV 612
+++ ++ ++L + GE L VN + ++ DE+V + R+ +L +++ ++P V
Sbjct: 298 SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVT 357
Query: 613 L-GIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIA 671
L + ++A FF RF E + +Y+ +F+ ++ +PR+ +R+ +E+ R+ +N+IA
Sbjct: 358 LVEQESNTNTAAFF-PRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIA 416
Query: 672 CEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLL 731
CEGA+R+ER E +W+ R AGFT PL+ + K + NY + ++E L
Sbjct: 417 CEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL-RNYSDKYRLEERDGALY 475
Query: 732 QGWKGRIVYALSTWK 746
GW R + A WK
Sbjct: 476 LGWMHRDLVASCAWK 490
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 573 (206.8 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 132/374 (35%), Positives = 204/374 (54%)
Query: 374 DLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQ 433
DL+ +L CA+AV D L+ Q++Q S +G+ +QR+ +GL ARLA SG+
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSS 285
Query: 434 IYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYG 493
IY AL K + ++L H+ ACP+ K +N I + + +HIIDF I G
Sbjct: 286 IYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQG 345
Query: 494 FQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNA 553
QW LI+ L +RPGG P +RITGID P+ F +E G+RL K AE VPFEF+
Sbjct: 346 GQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHG 405
Query: 554 IAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVL 613
A ++IE L + +GE L VN ++ DE+V V+ R+ +L L++ ++P+V L
Sbjct: 406 AALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTL 465
Query: 614 GIVNG-AHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIAC 672
++APF + RF E + Y +F+ ++ + R+ ER+ +E+ RE +N+IAC
Sbjct: 466 VEQEANTNTAPF-LPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIAC 524
Query: 673 EGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQ 732
EG ER ER E +W+ R AGF PL+ + K +++ Y + + ++E L
Sbjct: 525 EGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLES-YSEKYTLEERDGALYL 583
Query: 733 GWKGRIVYALSTWK 746
GWK + + W+
Sbjct: 584 GWKNQPLITSCAWR 597
Score = 40 (19.1 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 278 ENENSPEGSRGKKNPHPEEVSL 299
EN NSP N + E+SL
Sbjct: 159 ENNNSPLSGSSATNTNETELSL 180
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 129/374 (34%), Positives = 206/374 (55%)
Query: 374 DLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQ 433
DL+ +L CA+AV+ N+ A + ++R S +G+ +QR+ +GL ARLA SG+
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 434 IYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYG 493
IY +L S+ + + L ++ CP+ K +N I + R+HIIDF I G
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQG 168
Query: 494 FQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNA 553
QW LIQ ++RPGGAP +RITG+ + +RL K A+ F VPF FNA
Sbjct: 169 SQWIALIQAFAARPGGAPNIRITGVG-------DGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 554 IAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVL 613
+++ +++E+L++ GE L VN Y +L DE+V ++ R+ +L +++ ++P V L
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTL 281
Query: 614 GIVN-GAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIAC 672
+++PF + RF E L +Y+ +F+ ++ +PR ER+ IE+ R+ +N+IAC
Sbjct: 282 VEQECNTNTSPF-LPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIAC 340
Query: 673 EGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQ 732
EGAERIER E +W+ R AGF PL+ I + + +Y + I+E L
Sbjct: 341 EGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALL-RDYSNGYAIEERDGALYL 399
Query: 733 GWKGRIVYALSTWK 746
GW RI+ + WK
Sbjct: 400 GWMDRILVSSCAWK 413
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 121/372 (32%), Positives = 196/372 (52%)
Query: 376 RTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIY 435
+ +L CA+A++ A ++ ++RQ S GD QR+A +GL AR+A SG IY
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIY 282
Query: 436 TALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQ 495
AL K + + L A + CP K +N I+ + +HIIDF I G Q
Sbjct: 283 RALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQ 342
Query: 496 WPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIA 555
+ LI+ ++ PG P+LR+TGID P+ + + G RL + AE V F+F A+
Sbjct: 343 YMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMP 402
Query: 556 QKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPD-VFVLG 614
K + L GE L+VN ++ ++ DE+V R+ +L++++ +NP V V+
Sbjct: 403 SKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVE 462
Query: 615 IVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEG 674
+++PFF RF EA +YS +F+ L+ +PRE ERM +ER+ R+ +N++ACEG
Sbjct: 463 QDVNTNTSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEG 521
Query: 675 AERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGW 734
ERIER E +W+ R M AGF P++ ++ + + Y + + E+ L W
Sbjct: 522 EERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCW 581
Query: 735 KGRIVYALSTWK 746
+ + + S W+
Sbjct: 582 EEKSLIVASAWR 593
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 124/371 (33%), Positives = 192/371 (51%)
Query: 382 CAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISK 441
CA+ ++ +D A + L QIR+ S GD +R+A F + L RL+ + A S
Sbjct: 224 CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSP----ATSSS 278
Query: 442 HTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQ 501
+S D++ +Y ACP+ K ++ +N+ I+ EK+ ++HI+DFGI+ G QWP L+Q
Sbjct: 279 SSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQ 338
Query: 502 RLSSRPGGAP-KLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDT 560
L++R G P ++R++GI P G P + TG RL +A+ + F+F I
Sbjct: 339 ALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHL 398
Query: 561 IQIEDLNIDSGEVLVVNCLYRFRNLLDET-VVVDCPRNIVLNLIRKMNPDVFVLGIVNGA 619
+ +D EVL VN + + LLDET +VD L L + +NP V LG +
Sbjct: 399 LNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDT----ALRLAKSLNPRVVTLGEYEVS 454
Query: 620 HSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACE--GAER 677
+ F R + AL FYS +F+ LE N+ R+ ER+ +ERE+FGR +I E G R
Sbjct: 455 LNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHR 514
Query: 678 IERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERV-DTNYHKDFVIDEDSQWLLQ-GWK 735
ER E +QW+V AGF + L+ + AK + + NY + I E + W
Sbjct: 515 -ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWN 573
Query: 736 GRIVYALSTWK 746
+ LS+W+
Sbjct: 574 DLPLLTLSSWR 584
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 115/372 (30%), Positives = 195/372 (52%)
Query: 379 LTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTAL 438
L CA+A+ + A L+K++ + S M ++A FA L R+ T
Sbjct: 184 LVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVC 243
Query: 439 ISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPC 498
+ + S +VL+ + F +CP+ K ++F +N+ I+ A R+H+ID G+ G QWP
Sbjct: 244 AAVNPSFEEVLEMH--FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPA 301
Query: 499 LIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIA-QK 557
L+Q L+ RPGG P R+TGI PQ + ++ +++ G +LA++A+ V FEF +A +
Sbjct: 302 LMQALALRPGGPPSFRLTGIGPPQT--ENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAES 359
Query: 558 WDTIQIEDLNI-DSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIV 616
++ E E LVVN ++ LL + ++ +LN ++ + P + +
Sbjct: 360 LSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEK----LLNTVKAIKPSIVTVVEQ 415
Query: 617 NGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIF-GREAMNVIACEGA 675
H+ F+ RF EAL +YS+LFD LE + +P + + E++ GR+ +NV+A EG+
Sbjct: 416 EANHNGIVFLDRFNEALHYYSSLFDSLEDSY--SLPSQDRVMSEVYLGRQILNVVAAEGS 473
Query: 676 ERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKD-FVIDEDSQWLLQGW 734
+R+ER ET QW++R AGF + L K A + D + ++E+ L+ GW
Sbjct: 474 DRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGW 533
Query: 735 KGRIVYALSTWK 746
+ R + S WK
Sbjct: 534 QTRPLITTSAWK 545
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 483 (175.1 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 123/372 (33%), Positives = 198/372 (53%)
Query: 379 LTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTAL 438
L CA+AV N+ + A L+K + +SS M+++A FA+GL R+ +IY
Sbjct: 156 LLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIY----RIYPRD 211
Query: 439 ISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPC 498
+S +D L+ + F +CP+ K ++F +N+ I+ + A ++H+ID G+ +G QWP
Sbjct: 212 DVALSSFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPA 269
Query: 499 LIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIA-QK 557
LIQ L+ RP G P R+TGI G+ + ++E G +L + A T V FEF +IA
Sbjct: 270 LIQALALRPNGPPDFRLTGI-----GYSLTD-IQEVGWKLGQLASTIGVNFEFKSIALNN 323
Query: 558 WDTIQIEDLNIDSG-EVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIV 616
++ E L+I G E + VN ++ LL +D L+ I+ + PD+ +
Sbjct: 324 LSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDK----FLSTIKSIRPDIMTVVEQ 379
Query: 617 NGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIF-GREAMNVIACEGA 675
H+ F+ RF E+L +YS+LFD LE P P + + E+F GR+ +N++ACEG
Sbjct: 380 EANHNGTVFLDRFTESLHYYSSLFDSLEG--P---PSQDRVMSELFLGRQILNLVACEGE 434
Query: 676 ERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKD-FVIDEDSQWLLQGW 734
+R+ER ET QW+ R GF + + K A + D + ++E+ LL GW
Sbjct: 435 DRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGW 494
Query: 735 KGRIVYALSTWK 746
+ R + A S W+
Sbjct: 495 QTRPLIATSAWR 506
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 468 (169.8 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 123/375 (32%), Positives = 194/375 (51%)
Query: 379 LTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAG-SGTQIYTA 437
L CA+AV + A L+KQI + S M+++A FA+ L R+ S +Q +
Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIYRLSPSQ---S 229
Query: 438 LISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWP 497
I H S +D L+ + F CP+ K ++F +N+ I+ + R+H+IDF + G QWP
Sbjct: 230 PID-H-SLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWP 285
Query: 498 CLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNA-IAQ 556
L+Q L+ RPGG P R+TGI P P + + E G +LA AE V FE+ +A
Sbjct: 286 ALMQALALRPGGPPVFRLTGIGPPAPD--NFDYLHEVGCKLAHLAEAIHVEFEYRGFVAN 343
Query: 557 KWDTIQIEDLNIDSGEV--LVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLG 614
+ L + E+ + VN ++ LL +D VL ++ ++ P++F +
Sbjct: 344 TLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDK----VLGVVNQIKPEIFTVV 399
Query: 615 IVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEG 674
H++P F+ RF E+L +YSTLFD LE VP ++++ E + G++ NV+AC+G
Sbjct: 400 EQESNHNSPIFLDRFTESLHYYSTLFDSLE-GVPSG-QDKVMSEVYL-GKQICNVVACDG 456
Query: 675 AERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDT-NYHKDFVIDEDSQWLLQG 733
+R+ER ET QW+ R AGF + K A + N + + ++E L+ G
Sbjct: 457 PDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLG 516
Query: 734 WKGRIVYALSTWKPS 748
W R + A S WK S
Sbjct: 517 WHTRPLIATSAWKLS 531
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 292 (107.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 70/212 (33%), Positives = 106/212 (50%)
Query: 378 LLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTA 437
LL CA VA+ +NA L+Q+ +S GD MQR+A F + L R+ S +Y A
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 438 LISKHTSAADVLKAYH---LFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGF 494
L + T +V + H LF P K+S +N+ I+ E +H+ID
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 495 QWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAI 554
QW L+Q +SRP G P LRITG+ + E +E+ RL + AE +PF+FN +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVHHQK------EVLEQMAHRLIEEAEKLDIPFQFNPV 230
Query: 555 AQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLL 586
+ D + +E L + +GE L V+ + + L
Sbjct: 231 VSRLDCLNVEQLRVKTGEALAVSSVLQLHTFL 262
Score = 239 (89.2 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 52/147 (35%), Positives = 82/147 (55%)
Query: 600 LNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIER 659
LN I ++P V V+ + H+ + R E+L+ Y+ LFD LET VPR +R+ +E+
Sbjct: 333 LNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEK 392
Query: 660 EIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHK 719
+FG E N+I+CEG ER ER E ++W R AGF +PL+ M A+ +
Sbjct: 393 MLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFD 452
Query: 720 DFVIDEDSQWLLQGWKGRIVYALSTWK 746
+ I E+S + W+ R +Y++S W+
Sbjct: 453 GYRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 457 (165.9 bits), Expect = 6.5e-43, P = 6.5e-43
Identities = 122/379 (32%), Positives = 192/379 (50%)
Query: 379 LTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEAR---LAGSGTQIY 435
L CA+A+ N+ A L+KQI + S M+++A FA+ L R L+ QI
Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQID 284
Query: 436 TALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQ 495
L +D L+ + F CP+ K ++F +N+ I+ E R+H+IDF + G Q
Sbjct: 285 HCL-------SDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQ 335
Query: 496 WPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEF---- 551
WP L+Q L+ R GG P R+TGI P P ++ + E G +LA+ AE V FE+
Sbjct: 336 WPALMQALALREGGPPTFRLTGIGPPAPD--NSDHLHEVGCKLAQLAEAIHVEFEYRGFV 393
Query: 552 -NAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDV 610
N++A D +E L E + VN ++ LL ++ VL +++++ P +
Sbjct: 394 ANSLADL-DASMLE-LRPSDTEAVAVNSVFELHKLLGRPGGIEK----VLGVVKQIKPVI 447
Query: 611 FVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVI 670
F + H+ P F+ RF E+L +YSTLFD LE VP ++++ E + G++ N++
Sbjct: 448 FTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE-GVPNS-QDKVMSEVYL-GKQICNLV 504
Query: 671 ACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDT-NYHKDFVIDEDSQW 729
ACEG +R+ER ET QW R +G L K A + N + + ++E +
Sbjct: 505 ACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGC 564
Query: 730 LLQGWKGRIVYALSTWKPS 748
L+ GW R + S WK S
Sbjct: 565 LMLGWHTRPLITTSAWKLS 583
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 467 (169.5 bits), Expect = 8.8e-43, P = 8.8e-43
Identities = 122/376 (32%), Positives = 193/376 (51%)
Query: 375 LRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQI 434
L TLL CA+AV+A++ A +LL +I Q S+ G QR+A F++ + ARL S I
Sbjct: 290 LLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGI 349
Query: 435 YTALISK---HTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIM 491
Y AL S+ T + ++ A+ +F P K S+F +N+ I EK +HIID IM
Sbjct: 350 YAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIM 409
Query: 492 YGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEF 551
G QWP L L+SRPGG P +R+TG+ E ++ TG+RL+ +A+ +PFEF
Sbjct: 410 QGLQWPGLFHILASRPGGPPHVRLTGLGTSM------EALQATGKRLSDFADKLGLPFEF 463
Query: 552 NAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVF 611
+A+K + E LN+ E + V+ L +L D T D L L++++ P V
Sbjct: 464 CPLAEKVGNLDTERLNVRKREAVAVHWLQH--SLYDVTGS-DAH---TLWLLQRLAPKVV 517
Query: 612 VLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIA 671
+ + +H+ F + RF EA+ +YS LFD L + E ER ++E+++ +E NV+A
Sbjct: 518 TVVEQDLSHAGSF-LGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLA 576
Query: 672 CEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLL 731
G R + ++ W+ + + GF + L A + + + +D+ L
Sbjct: 577 VGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLK 635
Query: 732 QGWKGRIVYALSTWKP 747
GWK + S W P
Sbjct: 636 LGWKDLSLLTASAWTP 651
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 445 (161.7 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 116/382 (30%), Positives = 197/382 (51%)
Query: 373 VDLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGT 432
V L L CA+AV + A L+K++ ++S M ++A FA+ L R+
Sbjct: 155 VRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY---- 210
Query: 433 QIYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMY 492
+I+ + + S ++L+ F +CP+ K ++F +N+ I+ + +H+ID G+
Sbjct: 211 RIHPSAAAIDPSFEEILQMN--FYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQ 268
Query: 493 GFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFN 552
G QWP L+Q L+ RPGG P R+TG+ P E ++E G +LA+ A+ V F+FN
Sbjct: 269 GMQWPALMQALALRPGGPPSFRLTGVGNPSN----REGIQELGWKLAQLAQAIGVEFKFN 324
Query: 553 AIAQKWDTIQIEDLNID------SGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKM 606
+ T ++ DL D E LVVN ++ +L + ++ +L ++ +
Sbjct: 325 GLT----TERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEK----LLATVKAV 376
Query: 607 NPDVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIF-GRE 665
P + + H+ F+ RF EAL +YS+LFD LE V IP + + E++ GR+
Sbjct: 377 KPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVV--IPSQDRVMSEVYLGRQ 434
Query: 666 AMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKD-FVID 724
+N++A EG++RIER ET QW+ R AGF + L + K A + + D + ++
Sbjct: 435 ILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVE 494
Query: 725 EDSQWLLQGWKGRIVYALSTWK 746
E+ L+ W+ + + A S WK
Sbjct: 495 ENDGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 422 (153.6 bits), Expect = 5.3e-39, P = 5.3e-39
Identities = 104/359 (28%), Positives = 176/359 (49%)
Query: 396 ELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLKAYHLF 455
+ L +I++ S +GD +QR+ FA+ L + S + S +S D + +Y
Sbjct: 193 DTLIRIKESVSESGDPIQRVGYYFAEALSHKETESPSS------SSSSSLEDFILSYKTL 246
Query: 456 LAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAP-KLR 514
ACP+ K ++ +N+ I+ ++ +HI+DFGI G QW L+Q L++R G P ++R
Sbjct: 247 NDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIR 306
Query: 515 ITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVL 574
I+GI P G P + TG RL +A + FEF + + +D EVL
Sbjct: 307 ISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVL 366
Query: 575 VVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALF 634
VVN + LLDET L L R +NP + LG + + F R + +L
Sbjct: 367 VVNFMLELYKLLDETATTV---GTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLR 423
Query: 635 FYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEG-----AERIERPETYKQWQV 689
FYS +F+ LE N+ R+ ER+ +ER +FGR M+++ + R E +QW+V
Sbjct: 424 FYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRV 483
Query: 690 RNMRAGFTQLPLNEEIMKMAKERV-DTNYHKDF-VIDEDSQWLLQGWKGRIVYALSTWK 746
+AGF + + + AK + + NY + +++ + ++ W + +S+W+
Sbjct: 484 LMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 333 (122.3 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 96/353 (27%), Positives = 169/353 (47%)
Query: 416 AECFADGLEARLAGSGTQIYTALISKH-------TSAADVLKAYHLFL-AACPFRKLSNF 467
AE A + S + ++T+ + K + +D Y+L+L PF + +
Sbjct: 102 AETVATWTTNEMTMSNSTVFTSSVCKEQFLFRTKNNNSDFESCYYLWLNQLTPFIRFGHL 161
Query: 468 FSNKTIMNLAEKATR--LHIIDFGIMYGFQWPCLIQRL---SSRPGGAP-KLRITGIDLP 521
+N+ I++ E LHI+D I G QWP L+Q L SS P P LRITG
Sbjct: 162 TANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRD 221
Query: 522 QPGFKPAERVEETGRRLAKYAETFKVPFEFNAIA-QKWDT----IQIEDLNIDS--GEVL 574
G + TG RL ++A++ + F+F+ + + D +QI L + + GE +
Sbjct: 222 VTG------LNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETI 275
Query: 575 VVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALF 634
VNC++ + ++ D + L+ I+ +N + + H F+ RF EA+
Sbjct: 276 AVNCVHFLHKIFNDDG--DMIGHF-LSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVD 332
Query: 635 FYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRA 694
Y +FD LE +P ER+ +E+ FG+E ++V+A E ER +R ++ W+ R
Sbjct: 333 HYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRF 392
Query: 695 GFTQLPLNEEIMKMAKERVDTNYHKD-FVIDEDSQWLLQGWKGRIVYALSTWK 746
GF +P+ + AK + +Y + + + + L GW+ R ++++S+WK
Sbjct: 393 GFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 63 (27.2 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 375 LRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARL 427
LR LL A V+ ++ A LL + +SS GD +R+ F L R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 350 (128.3 bits), Expect = 4.0e-31, P = 4.0e-31
Identities = 108/381 (28%), Positives = 172/381 (45%)
Query: 373 VDLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGT 432
+ L +LL CA+ VA + R A LL +I + S G +R+ FA L+ R+ S
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 433 QIYTALISKH----TSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDF 488
+ +S+ + + A + + P K S+F +N+ I + +HIID
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 489 GIMYGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVP 548
+M G QWP L L+SRP +RITG ++ + TGRRLA +A + +P
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGFG------SSSDLLASTGRRLADFASSLNLP 211
Query: 549 FEFNAIAQK-WDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNI-VLNLIRKM 606
FEF+ I + I L GE +VV+ + L D T N+ L ++R++
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQH--RLYDVT-----GNNLETLEILRRL 264
Query: 607 NPDVFVLGIVNGAHS-APFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGRE 665
P++ + ++ F+ RF EAL +YS LFD L + E ER +E+ + G E
Sbjct: 265 KPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTE 324
Query: 666 AMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDE 725
N++A G R +R +W+ R GF + L A + + + E
Sbjct: 325 IRNIVAHGGGRR-KR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVE 379
Query: 726 DSQWLLQGWKGRIVYALSTWK 746
++ L GWK + S WK
Sbjct: 380 ENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 362 (132.5 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 113/429 (26%), Positives = 197/429 (45%)
Query: 339 LQNETSKNVRQN---XXXXXXXXXXXXXXXXXXXXDVVDLRTLLTLCAQAVAANDRRNAY 395
+QN + N N V +T++ + A A+A A
Sbjct: 227 IQNLVTPNPNPNPVLSFSPSSSSSSSSPSTASTTTSVCSRQTVMEI-ATAIAEGKTEIAT 285
Query: 396 ELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLKAYHLF 455
E+L ++ Q + + +++ + L +R+A T++Y +H + +L Y L
Sbjct: 286 EILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELYG---KEHLISTQLL--YEL- 339
Query: 456 LAACPFRKLSNFFSNKTIMNLAEK---ATRL-HIIDFGIMYGFQWPCLIQRLSSRPGG-- 509
P KL +N I++ A+ + H+IDF I G Q+ L++ LS+R G
Sbjct: 340 ---SPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKS 396
Query: 510 ----APKLRITGID------LPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQ-KW 558
+P ++IT + L G + ER++ G L++ + + FN + +
Sbjct: 397 QSQNSPVVKITAVANNVYGCLVDDGGE--ERLKAVGDLLSQLGDRLGISVSFNVVTSLRL 454
Query: 559 DTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVN- 617
+ E L D E L VN ++ + DE+V + PR+ +L ++ + P V L
Sbjct: 455 GDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEM 514
Query: 618 GAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAER 677
+++APF + R E+ Y L + +E+ VP +R +E I GR+ +N +ACEG +R
Sbjct: 515 NSNTAPF-LGRVSESCACYGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDR 572
Query: 678 IERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKGR 737
IER E + +W++R AGF +PL+E+I + K R H F + ED+ + GW GR
Sbjct: 573 IERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR-GNRVHPGFTVKEDNGGVCFGWMGR 631
Query: 738 IVYALSTWK 746
+ S W+
Sbjct: 632 ALTVASAWR 640
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 354 (129.7 bits), Expect = 7.6e-30, P = 7.6e-30
Identities = 99/393 (25%), Positives = 182/393 (46%)
Query: 377 TLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYT 436
++L A+A + D A ++L + + SS GD Q++A F L R+ GSG + Y
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYR 204
Query: 437 ALIS-----KHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIM 491
+++ K S K F P+ + +N I+ + ++HI+D
Sbjct: 205 TMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 492 YGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKP---AERV-EETGRRLAKYAETFKV 547
+ QWP L++ L++R P LR+T + + + R+ +E G R+ K+A V
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 548 PFEFNAIAQKWDTIQIE--DLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRK 605
PF+FN I D + + +L++ EVL +NC+ + PR+ V++ R+
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASR----GSPRDAVISSFRR 380
Query: 606 MNPDVFVL----GIVNGAHSAPF---FITRFREALFFYSTLFDMLETNVPREIPERMLIE 658
+ P + + + G F F+ F E L ++ F+ E + PR ER+++E
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 659 REIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYH 718
R GR ++++ACE ++ ER ET ++W R +GF + ++E+ + + Y
Sbjct: 441 RAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALL-RRYK 498
Query: 719 K---DFVIDEDSQWLLQGWKGRIVYALSTWKPS 748
+ V D+ + W+ + V S W+P+
Sbjct: 499 EGVWSMVQCPDAAGIFLCWRDQPVVWASAWRPT 531
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 364 (133.2 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 111/390 (28%), Positives = 180/390 (46%)
Query: 374 DLRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTG-DGMQRMAECFADGLEARLAGSGT 432
+L LLT C A+ + + + + +S G M R+ + + L R+A
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWP 332
Query: 433 QIYTALISKH---TSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFG 489
I+ + T + A P K +F +N+ ++ E R+HIIDF
Sbjct: 333 HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFD 392
Query: 490 IMYGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPF 549
I G QWP Q L+SR +RITGI G E + ETG RL +AE + F
Sbjct: 393 IKQGLQWPSFFQSLASRINPPHHVRITGI-----GESKLE-LNETGDRLHGFAEAMNLQF 446
Query: 550 EFNAIAQKWDTIQIEDLNIDSGEVLVVNCLYRF-RNLLDETVVVDCPRNIVLNLIRKMNP 608
EF+ + + + +++ L++ GE + VNC+ + + L D T R+ L LIR NP
Sbjct: 447 EFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAI--RDF-LGLIRSTNP 503
Query: 609 DVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMN 668
VL H++ TR +L +YS +FD + TN+ + R+ +E +FGRE N
Sbjct: 504 IALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRN 563
Query: 669 VIACEGAERIERPETYKQWQVRNMRAGFTQLPLNE-EIM--KMAKERVDTNYHKDFVI-- 723
++ACEG+ R ER ++ W+ + GF L ++E E++ KM ++ F +
Sbjct: 564 IVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVER 623
Query: 724 -DEDSQW-------LLQGWKGRIVYALSTW 745
DED+ + W + +Y +S W
Sbjct: 624 SDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 38 (18.4 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 142 HESPDGTHDSSNSYCNT-STISAESDNLVDHGWNSDL 177
H P+ T+ S N Y + +T + N+ ++ +DL
Sbjct: 232 HRVPEPTNGSRNPYSHRGATEERTTGNINNNNNRNDL 268
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 304 (112.1 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 107/385 (27%), Positives = 163/385 (42%)
Query: 375 LRTLLTLCAQAVAANDRRNAYELLKQIRQHSS---STGD--GMQRMAECFADGLEARLAG 429
LR + L A A A+ + EL + I S GD M+R+A F +GL L
Sbjct: 102 LRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLER 161
Query: 430 SGTQIYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFG 489
ADV+ A+ L P+ + + I+ + R+HI+D+
Sbjct: 162 DSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYD 221
Query: 490 IMYGFQWPCLIQRLSSRPGG--APKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKV 547
I G QW L+Q L SR G A LRIT + G K V+ETGRRL +A++
Sbjct: 222 INEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQ 281
Query: 548 PFEFNAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIV--LNLIRK 605
PF + + L + GE +V+NC+ +T P +++ L+ +
Sbjct: 282 PFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQT-----PSSVISFLSEAKT 336
Query: 606 MNPDVFVLGIVN-GAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGR 664
+NP + L G F+ RF + L +S +FD LE + P R +ER G
Sbjct: 337 LNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGP 396
Query: 665 EAMNV---IACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDF 721
N I AE +E ++ QW N GF L ++ AK + ++ F
Sbjct: 397 WVANWLTRITANDAE-VESFASWPQWLETN---GFKPLEVSFTNRCQAKLLLSL-FNDGF 451
Query: 722 VIDEDSQ-WLLQGWKGRIVYALSTW 745
++E Q L+ GWK R + + S W
Sbjct: 452 RVEELGQNGLVLGWKSRRLVSASFW 476
Score = 49 (22.3 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 29/122 (23%), Positives = 45/122 (36%)
Query: 55 PNPVADSPNSSSVVTQERDSSEDYDFSDVVLKYI-NEMLMEEDMEEKTCMFQESSAALQA 113
P A S +S+ + D D DF DV+ + +E M E E M + +
Sbjct: 19 PLATAASTSSNGYSLNDLDIDWDCDFRDVIESIMGDEGAMMEPESEAVPMLHDQEGLCNS 78
Query: 114 AEKSLYELLGEKYPPQPSYVNKKFVDHDH---ESPDGTHDSSNSYCNTSTISAESDNLVD 170
A L G + +P K + H + D + ++ S T I A +LV
Sbjct: 79 ASTGLSVADGVSFG-EPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVS 137
Query: 171 HG 172
G
Sbjct: 138 PG 139
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 296 (109.3 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 103/390 (26%), Positives = 174/390 (44%)
Query: 375 LRTLLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQI 434
+ LL CA A+ +ND +++L + + GD QR+ F L +R A S T
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSR-AVSKTPT 85
Query: 435 YTALISKHTSAADVLKAYHLF-LAA----CPFRKLSNFFSNKTIMNLAEKATRLHIIDFG 489
++ IS AD L + + LAA P+ + +N I+ E + +HI+D
Sbjct: 86 LSSTIS-FLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLS 144
Query: 490 IMYGFQWPCLIQRLSSRPGGAPKL-RITGIDLPQPGFKPAERV--EETGRRLAKYAETFK 546
+ + Q P LI ++SR P L ++T + F P + EE G +L +A T
Sbjct: 145 LTHCMQIPTLIDAMASRLNKPPPLLKLTVVS-SSDHFPPFINISYEELGSKLVNFATTRN 203
Query: 547 VPFEFNAIAQKWD---TIQIEDLNI---DSGEVLVVNCLYRFRNLLDETVVVDCP--RNI 598
+ EF + + + ++ L I E LVVNC R + +E + R +
Sbjct: 204 ITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTV 263
Query: 599 VLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIE 658
L +R +NP + L + ++ + R + A ++ FD +T + + R E
Sbjct: 264 FLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFMSEQ---RRWYE 320
Query: 659 REIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTN-Y 717
EI + NV+A EGAER+ER ET ++W R A F + + E+ + K ++ +
Sbjct: 321 AEISWK-IENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAV 379
Query: 718 HKDFVIDEDSQWLLQGWKGRIVYALSTWKP 747
++D + L+ WKG V + W P
Sbjct: 380 GWGMKKEDDDESLVLTWKGHSVVFATVWVP 409
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 236 (88.1 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 100/383 (26%), Positives = 162/383 (42%)
Query: 378 LLTLCAQAVAANDRRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTA 437
LL CA A+ A++ L + + +SS+GD +R+A L+ L+ S + ++
Sbjct: 148 LLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSS--VSSS 205
Query: 438 LISKHTSAADVLKAYHL----FLAACPFRKLSNFFSNKTIMNLAEKATR----LHIIDFG 489
T A+ +K + F P+ L N +N I+ + + + LHIID G
Sbjct: 206 FWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIG 265
Query: 490 IMYGFQWPCLIQRLSSR-PGGAPKLRITGI-DLPQP-GFKPAERVEETGRRLAKYAETFK 546
+ +G QWP L++ LS R G P++RIT I DL F G +L +A + K
Sbjct: 266 VSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARSLK 325
Query: 547 VPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKM 606
+ + + + D +Q+ D + E L+V +R +L ++ R L +R +
Sbjct: 326 INLQISVL----DKLQLIDTS--PHENLIVCAQFRLHHLKHS---INDERGETLKAVRSL 376
Query: 607 NPDVFVLGIVNG-AHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGRE 665
P VL NG S+ F F + L + D + E E ER++ E
Sbjct: 377 RPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSE----ERKLMEGE 432
Query: 666 AMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDE 725
A V+ G + E ++W R AGF E+ + AK + Y ++ I
Sbjct: 433 ATKVLMNAG----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLL-RKYDNNWEIRM 487
Query: 726 DSQWLLQG--WKGRIVYALSTWK 746
+ G WKG V S WK
Sbjct: 488 EDGDTFAGLMWKGEAVSFCSLWK 510
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 92/402 (22%), Positives = 161/402 (40%)
Query: 376 RTLLTLCAQAVAAND---RRNAYELLKQIRQHSSSTGDGMQRMAECFADGLEARL---AG 429
R LL CA + D R A E++ + +S GD R+A FA L R+ AG
Sbjct: 51 RDLLLACADLLQRGDLPAARRAAEIV--LAAAASPRGDAADRLAYHFARALALRVDAKAG 108
Query: 430 SGTQIYTALISKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFG 489
G + ++ S+ AY F PF + ++ +N+ I+ + A R+HI+D
Sbjct: 109 HGHVVVGGGAARPASSG----AYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLD 164
Query: 490 IMYGFQWPCLIQRLSSR--PG-GAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFK 546
++G QWP L+Q ++ R P G P++R+TG + + + TG RL +A +
Sbjct: 165 AVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADR------DTLLRTGNRLRAFARSIH 218
Query: 547 VPFEFNAIAQKWDTIQIEDL-NIDSGEVLVVNCLYRFRNLL---DETVVVDCP---RNIV 599
+PF F + T + +G + L DET+ V+C N+
Sbjct: 219 LPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLA 278
Query: 600 --------LNLIRKMNPDVFVLGI--VNGAHSAPFFITRFREALFFYSTLFDMLETNVPR 649
L ++ M+P V + G I + + + +
Sbjct: 279 GHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEA 338
Query: 650 EIPERMLIEREIFGREAMN--VIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMK 707
+P ER +E + + A G ++W AGF PL+ +
Sbjct: 339 TVPPGSR-ERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFAARPLSAFAVS 397
Query: 708 MAKERVDTNYHKD-FVIDEDSQWLLQGWKGRIVYALSTWKPS 748
A+ + +Y + +++ E GW+ R + ++S W+PS
Sbjct: 398 QARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQPS 439
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 63/201 (31%), Positives = 97/201 (48%)
Query: 495 QWPCLIQRLSSR--PGGAPKLRITGIDLPQPGFKPAERV----EETGRRLAKYAETFKVP 548
Q P LI ++++ P L++T I F P + EE G +L +A T V
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVI-ASDAEFHPPPLLGISYEELGSKLVNFATTRNVA 60
Query: 549 FEFNAIAQKW-DTIQ--IEDLNIDS---GEVLVVNCLYRFRNLLDETVVVDCPRNIVLNL 602
EF I+ + D + IE L ID E LVVNC + DE + + R++ L
Sbjct: 61 MEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNL-RSVFLKE 119
Query: 603 IRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTL-FDMLETNVPREIPERMLIEREI 661
+R +NP + L + ++ FI+R R +L+ Y + +D E + R +R E +I
Sbjct: 120 LRDLNPTIVTLIDEDSDFTSTNFISRLR-SLYNYMWIPYDTAEMFLTRGSEQRQWYEADI 178
Query: 662 FGREAMNVIACEGAERIERPE 682
+ NV+A EGAER+ER E
Sbjct: 179 SWK-IDNVVAKEGAERVERLE 198
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 88/375 (23%), Positives = 165/375 (44%)
Query: 394 AYELLKQIRQH---SSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTSAADVLK 450
A +L ++ H SS+ QR A A+ L + + + LI+ +
Sbjct: 293 AQGILARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESSP---PLITPENLILRIA- 348
Query: 451 AYHLFLAACPFRKLSNFFSNKTIMNLAEKA--TRLHIIDFGIMYGFQWPCLIQRLSSRPG 508
AY F PF + NF +N++I+ ++ R+HIIDF + YG QW L+Q L+S G
Sbjct: 349 AYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVG 408
Query: 509 GAPKLRITGIDL----PQPGFKPAE-RVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQI 563
G + R + + L P P E + T L +A K+PFE I
Sbjct: 409 GRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFE------------I 456
Query: 564 EDLNIDSGEVLVVNCLY---RFRNLLDETVVVDCPRN--------IVLNLIRKMNPDVFV 612
E L+++ L++N Y R+ E + V+ P N ++L +++++P++ V
Sbjct: 457 ELLSVE----LLLNPAYWPLSLRSSEKEAIAVNLPVNSVASGYLPLILRFLKQLSPNIVV 512
Query: 613 LGIVN-GAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIA 671
+ APF +L ++++L + L+ N ++ IER + + ++ +
Sbjct: 513 CSDRGCDRNDAPF-PNAVIHSLQYHTSLLESLDANQNQDDSS---IER-FWVQPSIEKLL 567
Query: 672 CEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLL 731
+ IER W++ + GF+ L++ A+ + N + F +++ L+
Sbjct: 568 MKRHRWIERSPP---WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLV 624
Query: 732 QGWKGRIVYALSTWK 746
W+ + + +S WK
Sbjct: 625 MCWQRKELVTVSAWK 639
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 186 (70.5 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 81/318 (25%), Positives = 136/318 (42%)
Query: 449 LKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLS---S 505
+ AY F PF + NF +N+TI+ E R+HI+DF I YG QW LIQ L+ +
Sbjct: 327 IAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRN 386
Query: 506 RPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIED 565
R AP L+IT P E + T L +A V FE IE
Sbjct: 387 RSSSAPSLKITAFASPSTVSDEFE-LRFTEENLRSFAGETGVSFE------------IEL 433
Query: 566 LNIDSGEVLVVNCLY----RFRNLLDETVVVDCPRN--------IVLNLIRKMNPDVFVL 613
LN++ +++N Y FR+ E + V+ P + ++L +++++P+V V
Sbjct: 434 LNME----ILLNPTYWPLSLFRSSEKEAIAVNLPISSMVSGYLPLILRFLKQISPNVVVC 489
Query: 614 G--IVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIA 671
+ + APF AL +Y++L + L++ IER ++
Sbjct: 490 SDRSCDRNNDAPF-PNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT 548
Query: 672 CEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDE---DSQ 728
R E W+ + GFT + L++ A+ + N + F +++ S
Sbjct: 549 ----NRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSP 604
Query: 729 WLLQGWKGRIVYALSTWK 746
L+ W+ + + +S WK
Sbjct: 605 SLVLCWQRKELVTVSAWK 622
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 182 (69.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 92/370 (24%), Positives = 149/370 (40%)
Query: 383 AQAVAANDRRNAYELLKQIRQH-SSSTGDGMQRMAECFADGLEARLAG-SGTQIYTALIS 440
A V +D A +L ++ Q SS G ++R A F + L L S T +LI
Sbjct: 212 AAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPYSLIF 271
Query: 441 KHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLI 500
K + AY F P + +NF SN+ ++ RLHIIDF I YG QW L+
Sbjct: 272 K-------IAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLM 324
Query: 501 QRLSSRPGGAP-KLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWD 559
Q L R AP L+IT P + T L +A + + ++ D
Sbjct: 325 QELVLRDNAAPLSLKITVF--ASPANHDQLELGFTQDNLKHFASEINISLDIQVLSL--D 380
Query: 560 TI-QIEDLNIDSGEVLVVNC-LYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVN 617
+ I N E + VN F +L P +VL ++ ++P + V
Sbjct: 381 LLGSISWPNSSEKEAVAVNISAASFSHL---------P--LVLRFVKHLSPTIIVCSD-R 428
Query: 618 GAHSAPF-FITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAE 676
G F + +L ++ LF+ L+ V + IER + E ++ + +
Sbjct: 429 GCERTDLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQKIERFLIQPEIEKLVL-DRSR 486
Query: 677 RIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKG 736
IERP WQ ++ GF+ + + A+ V + F +++ LL W+
Sbjct: 487 PIERP--MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQR 544
Query: 737 RIVYALSTWK 746
+ +S W+
Sbjct: 545 TELVGVSAWR 554
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 165 (63.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 81/371 (21%), Positives = 161/371 (43%)
Query: 386 VAANDRRNAYELLKQIRQH-SSSTGDGMQRMAECFADGLEARLAGSGTQIYTALISKHTS 444
V +++ + A +L ++ Q S G +QR A F + L + L GS +S +
Sbjct: 133 VESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRN--PIRLSSWSE 190
Query: 445 AADVLKAYHLFLAACPFRKLSNFFSNKTIMN-LAEKATR--LHIIDFGIMYGFQWPCLIQ 501
++A + P S+F +N+ I++ L+ +++ +H++DF I +G Q+ L++
Sbjct: 191 IVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMR 250
Query: 502 RLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQK-WDT 560
++ + LR+T + + + V+E L ++A K+ F+ + K ++
Sbjct: 251 EITEKSVSGGFLRVTAVVAEECAVE-TRLVKEN---LTQFAAEMKIRFQIEFVLMKTFEM 306
Query: 561 IQIEDLNIDSGEVLVVNCLYR-FRNLLDETVVVDCPRNIVLNLIRKMNPDVFVL----GI 615
+ + + GE VV FR L + + D +N +R+++P V V G
Sbjct: 307 LSFKAIRFVEGERTVVLISPAIFRRL---SGITD-----FVNNLRRVSPKVVVFVDSEGW 358
Query: 616 VNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGA 675
A S F F AL FY+ + + L+ P + ++E + R ++ A
Sbjct: 359 TEIAGSGSFR-REFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVL-RPKISAAVETAA 416
Query: 676 ERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWK 735
+R E W+ AG + L++ A+ ++ + F + + L+ W
Sbjct: 417 DRRHTGEM--TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWH 474
Query: 736 GRIVYALSTWK 746
GR + A S W+
Sbjct: 475 GRALVATSAWR 485
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 80/372 (21%), Positives = 161/372 (43%)
Query: 386 VAANDRRNAYELLKQIRQH-SSSTGDGMQRMAECFADGLEARLAGSG-TQIYTALISKHT 443
+ +++ A+ +L Q+ Q +S G +QR A F + L + L G+ Q+++ +
Sbjct: 110 IESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQLFS-----WS 164
Query: 444 SAADVLKAYHLFLAACPFRKLSNFFSNKTIMN-LAEKATR--LHIIDFGIMYGFQWPCLI 500
++A F P S+F +N+ I++ L+ +++ +H++DF I +G Q+ L+
Sbjct: 165 DIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLM 224
Query: 501 QRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQK-WD 559
+ ++ + LR+T + + + V+E L ++A K+ F+ + K ++
Sbjct: 225 REIAEKSANGGFLRVTAV-VAEDCAVETRLVKEN---LTQFAAEMKIRFQIEFVLMKTFE 280
Query: 560 TIQIEDLNIDSGEVLVVNCLYR-FRNLLDETVVVDCPRNIVLNLIRKMNPDVFVL----G 614
+ + + GE VV FR ++ V+ NL R ++P+V V G
Sbjct: 281 ILSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVN-------NLGR-VSPNVVVFVDSEG 332
Query: 615 IVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEG 674
A S F F A FY+ + + L+ P + ++E + R ++
Sbjct: 333 CTETAGSGSFR-REFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLL-RPKISAAVETA 390
Query: 675 AERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGW 734
A R R W+ AG + L++ A+ ++ + F + + L+ W
Sbjct: 391 ANR--RSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCW 448
Query: 735 KGRIVYALSTWK 746
GR + A S W+
Sbjct: 449 HGRALVATSAWR 460
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 105 (42.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 676 ERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWK 735
ER+ER E +W++R AGF Q PL+ + + K + Y + + + E +L GWK
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC-YSEHYTLVEKDGAMLLGWK 60
Query: 736 GRIVYALSTW 745
R + + S W
Sbjct: 61 KRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 749 698 0.00082 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 620 (66 KB)
Total size of DFA: 367 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.35u 0.09s 63.44t Elapsed: 00:00:03
Total cpu time: 63.36u 0.09s 63.45t Elapsed: 00:00:03
Start: Mon May 20 15:18:47 2013 End: Mon May 20 15:18:50 2013