BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004491
(749 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4FLF6|Y5696_SACEN UPF0261 protein SACE_5696 OS=Saccharopolyspora erythraea (strain
NRRL 23338) GN=SACE_5696 PE=3 SV=1
Length = 411
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 263/424 (62%), Gaps = 31/424 (7%)
Query: 9 FCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFVKR 68
+ +GT DTK EL +++G V ++ V VV VDVS SG ET R
Sbjct: 5 YVVGTFDTKGAELGYVAGLV----------AARGVPVVTVDVSTSGPETGTAD-----AR 49
Query: 69 KAVLSCLPESNGKIPDE----LDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSG 124
A + + E G PD DRG A++ M+ ALE FL + + GVI LGGSG
Sbjct: 50 PADVGNV-EVAGHHPDGAAAVFTGDRGTAVTAMAVALERFLA----GRAVGGVIALGGSG 104
Query: 125 GTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFAN 184
GT+L + A ++LP+G+PKV+VSTVASG Y+ +D+ + PSV DV G+N +SR V N
Sbjct: 105 GTALCTPAMRALPVGVPKVMVSTVASGDVSSYVDATDIAMFPSVTDVAGLNRISRRVLGN 164
Query: 185 AGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHAT 244
A A AG + G D ++++K V +TMFGVTTPCV V RLE Y+ +VFHAT
Sbjct: 165 AAHALAGAMTG------DIASTEDKPAVALTMFGVTTPCVTEVASRLEAR-YDPLVFHAT 217
Query: 245 GVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGAL 304
G GGRAME LV +G I VLD+TTTEV D V GGVM+ R DA +P V S GAL
Sbjct: 218 GTGGRAMEKLVDDGLIGAVLDLTTTEVCDLVAGGVMSAGEGRLDAIARTGVPYVGSCGAL 277
Query: 305 DMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLP 364
DMVNFGA +T+P +++ R ++VHN QV+LMRTT DE ++ +FIA KLN +R LP
Sbjct: 278 DMVNFGAFETVPERYRDRNLYVHNPQVTLMRTTPDECREIGSFIAAKLNACRGPVRFLLP 337
Query: 365 QNGISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFL 424
+ G+S LDAPG+PF+DP+A G L L + ++ + DR++ PHNIND FADA++ +F
Sbjct: 338 EGGVSLLDAPGQPFHDPDADGVLFEVLESELRQDGDRRIVRVPHNINDPAFADAVLTAFE 397
Query: 425 EISG 428
E+ G
Sbjct: 398 EVLG 401
>sp|P55607|Y4OV_RHISN Uncharacterized protein y4oV OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02140 PE=4 SV=1
Length = 285
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/269 (60%), Positives = 201/269 (74%)
Query: 481 ILSKLKYQIDKGLPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFA 540
++ + +I G PIIG GAGTG+SAK EEAG +DLIV+YNSGR+RMAGRGSLAGLL +
Sbjct: 15 LIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYG 74
Query: 541 DANAVVLEMANEVLPVVKEVPVLAGVCGTDPFRRVDYFLKQLESIGFFGVQNFPTVGLFD 600
+AN +V++MA+EVLPVVK PVLAGV GTDPF + FL++L+ IGF GVQNFPTVGL D
Sbjct: 75 NANQIVVDMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIGFAGVQNFPTVGLID 134
Query: 601 GNFRQNLEETGMGYGLEVEMIDKAHKMGLLTTPYAFNEGEAVKMAKAGADIIVAHMGLTT 660
G FRQNLEETGM Y EV MI +AH + LLTTPY F +AV MAKAGADI+V HMGLTT
Sbjct: 135 GLFRQNLEETGMSYAQEVAMIAEAHNLDLLTTPYVFGPDDAVAMAKAGADILVCHMGLTT 194
Query: 661 SGSIGAKTALSLDESVDRVQAIADAAHRINPDAIVLCHGGPISSPSEAEFILKRTKGVHG 720
G+IGA++ ++++ V + AA I D I+LCHGGPI++P +A FIL G HG
Sbjct: 195 GGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPEDARFILGACPGCHG 254
Query: 721 FYGASSMERLPVEQAITSTMRQYKSISIK 749
FYGASSMERLP E+AI S +K+I K
Sbjct: 255 FYGASSMERLPTEEAIKSQTLAFKAIRRK 283
>sp|P55606|Y4OU_RHISN UPF0261 protein y4oU OS=Rhizobium sp. (strain NGR234) GN=NGR_a02150
PE=3 SV=1
Length = 402
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 268/418 (64%), Gaps = 24/418 (5%)
Query: 8 VFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFVK 67
V+ +GT DTK EL++L +R + D V+VDVSVS ++ D V+
Sbjct: 4 VYVVGTCDTKGGELRYLRDLIRQ----------AGCDAVLVDVSVSEFHSQ-AADVD-VQ 51
Query: 68 RKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGGTS 127
V P N P++L D RGKA++ M++AL F++ + + G+IG GG+GGT+
Sbjct: 52 PSEVARFHP--NPPKPEDLKD-RGKAVAAMAQALVEFIRSRPD---VDGIIGAGGTGGTA 105
Query: 128 LISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAGA 187
LI+ A ++LPIG PKV+VSTVASG PY+G +D+ ++ SV DV G+N +SRVV ANA
Sbjct: 106 LIAPALRALPIGTPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNRISRVVLANAAH 165
Query: 188 AFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATGVG 247
+ AGMV+ ++ +D E+ +G+TMFGVTTPCV AV LE + ++ +VFHATG G
Sbjct: 166 SVAGMVLNKVSAAKD-----ERPAIGLTMFGVTTPCVQAVTRALEAD-FDCLVFHATGTG 219
Query: 248 GRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDMV 307
G++ E L + G +D++TTEV DY+VGGV C + RF A ++P V S GALDMV
Sbjct: 220 GQSFEKLADSALLVGGIDVSTTEVCDYLVGGVFPCTADRFGAFARTRLPYVGSCGALDMV 279
Query: 308 NFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQNG 367
NFGA DT+PS+F+ R++HVHN QV+LMRTT +E + +IA +LN +R +P+ G
Sbjct: 280 NFGAMDTVPSRFRSRRLHVHNPQVTLMRTTPEECNRIGEWIAERLNLCEGTVRFLIPELG 339
Query: 368 ISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLE 425
+SA+DAPG+PF+DPEA L + L ++ RQ+ P +IND +FA+ LV +F E
Sbjct: 340 VSAIDAPGQPFHDPEADSALFAALERTLRRTTKRQLIRVPLHINDPQFAELLVTNFKE 397
>sp|Q8ZAG3|Y3839_YERPE UPF0261 protein YPO3839/y0391/YP_3209 OS=Yersinia pestis GN=YPO3839
PE=3 SV=1
Length = 405
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 260/431 (60%), Gaps = 35/431 (8%)
Query: 5 IPR-VFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDF 63
+PR ++ T DTK +EL ++S +++ + + V VD+S + ++ D
Sbjct: 1 MPRHIYIATTTDTKGQELAYVSELIQA----------TGLTTVTVDLSTKESQRDSGADI 50
Query: 64 KFVKRKAVLSCLPESNGKIPDELD----DDRGKAISFMSKALENFLQIAIEDQVLAGVIG 119
C G PD DRG+AI+ M+ A E F+ ++ +A ++G
Sbjct: 51 ----------CAETVAGYHPDGRQAVFCGDRGQAINAMAIAFERFMVSRVD---VAALLG 97
Query: 120 LGGSGGTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSR 179
+GGSGGT+LI+ A + LPIG+PK++VST+ASG YIG SD+ ++ SV D+ G+N +SR
Sbjct: 98 MGGSGGTALITPAMQRLPIGIPKLMVSTMASGDVSGYIGASDIAMMYSVTDIAGLNRISR 157
Query: 180 VVFANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETM 239
V +NA A V G + ++ +K +G+TMFGVTTPC+ AV L E Y+ +
Sbjct: 158 RVLSNA----AHQVAGAVYFAQEASPVDDKPALGLTMFGVTTPCIQAVSAELSDE-YDCL 212
Query: 240 VFHATGVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVL 299
VFHATG GG+AME L + G + GVLD+TTTEV D + GV+AC RFDA IP V
Sbjct: 213 VFHATGSGGKAMEKLAESGLLAGVLDLTTTEVCDLLFDGVLACGPERFDAIAHTHIPYVG 272
Query: 300 SVGALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKI 359
S GALDMVNFG+ TIP+K+ R + HN QV+LMRTT EN + A +I KLN+ ++
Sbjct: 273 SCGALDMVNFGSPATIPAKYADRLFYKHNAQVTLMRTTEQENIEMARWIGEKLNRCQGEV 332
Query: 360 RLCLPQNGISALDAPGKPFYDPEATGTLISEL-RTLIQTNEDRQVKVYPHNINDSEFADA 418
R +P+ G SALDAPG+PF+D +A I L T+IQT++ R+V YP NIND FA A
Sbjct: 333 RFLIPEGGFSALDAPGQPFWDEKALTAFIRTLEETVIQTDK-RRVVHYPFNINDPLFAQA 391
Query: 419 LVDSFLEISGK 429
+++F EI +
Sbjct: 392 AIENFKEIVNR 402
>sp|Q7W9E3|Y1817_BORPA UPF0261 protein BPP1817 OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=BPP1817 PE=3 SV=1
Length = 402
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 251/421 (59%), Gaps = 26/421 (6%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFV 66
R++ T DTK EE ++L +R + V VV VDV+ SG+ G V
Sbjct: 7 RIYLAATYDTKGEEAEYLRQLLRRD----------GVMVVTVDVATSGQ-----GSPAMV 51
Query: 67 KRKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGGT 126
+ V +C P+ + +RG AI M+ A E +L + + V+G+GGSGGT
Sbjct: 52 SAQEVAACYPQGAQAV---FTGERGSAIVAMALAFERYLA---GQRDVGAVLGIGGSGGT 105
Query: 127 SLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAG 186
+L++ A ++LP+G+PK++VST+ASG PY+G SD+ ++ SV DV G+N +SR V ANA
Sbjct: 106 ALVTPAMRALPVGVPKLMVSTMASGNVAPYVGPSDIAMMYSVTDVAGLNRISRRVLANAA 165
Query: 187 AAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATGV 246
A AG + R A + VGITMFGVTTPCV V L Y+ +VFHATG
Sbjct: 166 GAIAGA----FRQARQPIADDGRPAVGITMFGVTTPCVQHVTAALHDR-YDCLVFHATGT 220
Query: 247 GGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDM 306
GG++ME L G + GVLD+TTTEV D++ GGV+AC RF A +P V S GALDM
Sbjct: 221 GGQSMEKLADSGLLAGVLDLTTTEVCDFLFGGVLACTDDRFGAIARSGVPYVGSCGALDM 280
Query: 307 VNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQN 366
VNFGA DT+P+ + R ++ HN QV+LMRTT EN + A+IA +LN+ ++R +P+
Sbjct: 281 VNFGALDTVPAACRERLLYPHNPQVTLMRTTAQENARQGAWIAERLNRCEGQVRFLIPEG 340
Query: 367 GISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLEI 426
G+SALDAPG+ FYD A L L ++ + R++ P +IND FA A V+ F EI
Sbjct: 341 GVSALDAPGQAFYDEAADAALFQALYDHVRQTDRRRLVRVPCHINDPLFARAAVEQFHEI 400
Query: 427 S 427
S
Sbjct: 401 S 401
>sp|Q7WHB9|Y3289_BORBR UPF0261 protein BB3289 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=BB3289 PE=3 SV=1
Length = 402
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/421 (42%), Positives = 251/421 (59%), Gaps = 26/421 (6%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFV 66
R++ T DTK EE ++L +R + V VV VDV+ SG+ G V
Sbjct: 7 RIYLAATYDTKGEEAEYLRQLLRRD----------GVMVVTVDVATSGQ-----GSPAMV 51
Query: 67 KRKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGGT 126
+ V +C P+ + +RG AI M+ A E +L + + V+G+GGSGGT
Sbjct: 52 SAQEVAACHPQGAQAV---FTGERGSAIVAMALAFERYLA---GQRDVGAVLGIGGSGGT 105
Query: 127 SLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAG 186
+L++ A ++LP+G+PK++VST+ASG PY+G SD+ ++ SV DV G+N +SR V ANA
Sbjct: 106 ALVTPAMRALPVGVPKLMVSTMASGNVAPYVGPSDIAMMYSVTDVAGLNRISRRVLANAA 165
Query: 187 AAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATGV 246
A AG + R A + VGITMFGVTTPCV V L Y+ +VFHATG
Sbjct: 166 GAIAGA----FRQARQPIADDGRPAVGITMFGVTTPCVQHVTAALHDR-YDCLVFHATGT 220
Query: 247 GGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDM 306
GG++ME L G + GVLD+TTTEV D++ GGV+AC RF A +P V S GALDM
Sbjct: 221 GGQSMEKLADSGLLAGVLDLTTTEVCDFLFGGVLACTDDRFGAIARSGVPYVGSCGALDM 280
Query: 307 VNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQN 366
VNFGA DT+P+ + R ++ HN QV+LMRTT EN + A+IA +LN+ ++R +P+
Sbjct: 281 VNFGALDTVPAACRERLLYPHNPQVTLMRTTAQENARQGAWIAERLNRCEGQVRFLIPEG 340
Query: 367 GISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLEI 426
G+SALDAPG+ FYD A L L ++ + R++ P +IND FA A V+ F EI
Sbjct: 341 GVSALDAPGQAFYDEAADAALFQALYDHVRQTDRRRLVRVPCHINDPLFARAAVEQFHEI 400
Query: 427 S 427
S
Sbjct: 401 S 401
>sp|Q981G1|Y9388_RHILO UPF0261 protein mll9388 OS=Rhizobium loti (strain MAFF303099)
GN=mll9388 PE=3 SV=2
Length = 402
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/418 (43%), Positives = 258/418 (61%), Gaps = 24/418 (5%)
Query: 8 VFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFVK 67
V+ +GT DTK EL++L +R S + E +V V+
Sbjct: 4 VYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEF--------HSEASDVD----VQ 51
Query: 68 RKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGGTS 127
V C P N +EL D RGKA++ MS+AL +++ + + G+IG GGSGGT+
Sbjct: 52 PAEVARCHP--NPLKAEELKD-RGKAVAAMSQALVEYIRSRPD---VDGIIGAGGSGGTA 105
Query: 128 LISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAGA 187
LI+ A ++LPIG+PKV+VSTVASG PY+G +D+ ++ SV DV G+N +SRVV ANA
Sbjct: 106 LIAPAMRALPIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNRISRVVLANAAH 165
Query: 188 AFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATGVG 247
+ AGMV+ ++ A+ E+ +G+TMFGVTTPCV AV LE ++ +VFHATG G
Sbjct: 166 SIAGMVLKQVG-----AAADERPAIGLTMFGVTTPCVQAVTRALEAN-FDCLVFHATGTG 219
Query: 248 GRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDMV 307
G++ E L G + G +D++TTEV DY+VGGV C RF A K+P V S GALDMV
Sbjct: 220 GQSFEKLADSGLLVGGIDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMV 279
Query: 308 NFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQNG 367
NFGA +T+PS+F+ R++HVHN QV+LMRT +E + +I +LN +R +P+ G
Sbjct: 280 NFGAMETVPSQFRSRRLHVHNPQVTLMRTNPEECSRIGEWIGERLNLCEGPVRFLIPELG 339
Query: 368 ISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLE 425
+SA+DAPG+PF+DPEA L + L ++ + RQ+ P +IND +FAD LV + E
Sbjct: 340 VSAIDAPGQPFHDPEADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTNLKE 397
>sp|Q7VYV4|Y1203_BORPE UPF0261 protein BP1203 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=BP1203 PE=3 SV=1
Length = 402
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 179/421 (42%), Positives = 250/421 (59%), Gaps = 26/421 (6%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFV 66
R++ T DTK EE ++L +R + V VV VDV+ SG+ G V
Sbjct: 7 RIYLAATYDTKGEEAEYLRQLLRRD----------GVMVVTVDVATSGQ-----GSPAMV 51
Query: 67 KRKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGGT 126
+ V +C P+ + +RG AI M+ A E +L + + V+G+GGSGGT
Sbjct: 52 SAQEVAACHPQGAQAV---FTGERGSAIVAMALAFERYLA---GQRDVGAVLGIGGSGGT 105
Query: 127 SLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAG 186
+L++ A ++LP+G+PK++VST+ASG PY+G SD+ ++ SV DV G+N +SR V ANA
Sbjct: 106 ALVTPAMRALPVGVPKLMVSTMASGNVAPYVGPSDIAMMYSVTDVAGLNRISRRVLANAA 165
Query: 187 AAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATGV 246
A AG + R A + VGITMFGVTTPCV V L Y+ +VFHATG
Sbjct: 166 GAIAGA----FRQARQPIADDGRPAVGITMFGVTTPCVQHVTAALHDR-YDCLVFHATGT 220
Query: 247 GGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDM 306
GG++ME L + GVLD+TTTEV D++ GGV+AC RF A +P V S GALDM
Sbjct: 221 GGQSMEKLADSRLLAGVLDLTTTEVCDFLFGGVLACTDDRFGAIARSGVPYVGSCGALDM 280
Query: 307 VNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQN 366
VNFGA DT+P+ + R ++ HN QV+LMRTT EN + A+IA +LN+ ++R +P+
Sbjct: 281 VNFGALDTVPAACRERLLYPHNPQVTLMRTTAQENARQGAWIAERLNRCEGQVRFLIPEG 340
Query: 367 GISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLEI 426
G+SALDAPG+ F+D A L L ++ + R++ P +IND FA A V+ F EI
Sbjct: 341 GVSALDAPGQAFHDEAADAALFQALYDHVRQTDKRRLVRVPCHINDPLFARAAVEQFHEI 400
Query: 427 S 427
S
Sbjct: 401 S 401
>sp|A8GL43|Y4740_SERP5 UPF0261 protein Spro_4740 OS=Serratia proteamaculans (strain 568)
GN=Spro_4740 PE=3 SV=1
Length = 409
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/431 (41%), Positives = 249/431 (57%), Gaps = 35/431 (8%)
Query: 8 VFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKFVK 67
V+ TADTK +EL++ VR +A + V VD+S S D
Sbjct: 8 VYIATTADTKGQELEY----VRQIIANLG------LPTVTVDLSTSSLPANPAADI---- 53
Query: 68 RKAVLSCLPESNGKIPD----ELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGS 123
C E G P+ +R AI+ M+ A E FL + +A ++GLGGS
Sbjct: 54 ------CAEEVAGYHPEGARAVFCPNRSHAITAMALAFERFL---LTRHDIAALLGLGGS 104
Query: 124 GGTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFA 183
GGT++I+ A + LPIGLPK++VS++A+G Y+G SD+ ++ SV D+ G+N +SR V +
Sbjct: 105 GGTAIITPAMQKLPIGLPKLMVSSMAAGDVSVYVGNSDIAMLYSVTDIAGLNRISRRVLS 164
Query: 184 NAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHA 243
NA AG V R D +EK VG+TMFGVTTPC+ V LE + ++ +VFHA
Sbjct: 165 NAACQIAGAV--RFATAHDI---EEKPAVGLTMFGVTTPCIKMVVSALEPQ-WDCLVFHA 218
Query: 244 TGVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGA 303
TG GGRA+E L+ + LD+TTTEVADY+ GGV+ C+ RF A IP +LS GA
Sbjct: 219 TGSGGRALEKLIDSRLLSAALDLTTTEVADYLFGGVLPCNEERFSAIARTGIPCILSCGA 278
Query: 304 LDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCL 363
LDM+NFG +T+P+++ R IH HN QV+L+RTT EN +I K+N S ++R +
Sbjct: 279 LDMINFGPPETVPARYAERLIHQHNPQVTLVRTTPQENASIGRWIGEKMNACSGEVRFVI 338
Query: 364 PQNGISALDAPGKPFYDPEATGTLISELR-TLIQTNEDRQVKVYPHNINDSEFADALVDS 422
P G+SALDAPG+PF+DP+A + L TL TN+ R +K H IND FA + +
Sbjct: 339 PGGGVSALDAPGQPFWDPQALAAFMQALESTLRPTNKRRLIKTAYH-INDPRFAHIVTEQ 397
Query: 423 FLEISGKNLMA 433
F I+ L++
Sbjct: 398 FQHIANPRLLS 408
>sp|Q92YY3|Y4129_RHIME UPF0261 protein RA0729 OS=Rhizobium meliloti (strain 1021)
GN=RA0729 PE=3 SV=1
Length = 398
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/427 (42%), Positives = 246/427 (57%), Gaps = 39/427 (9%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDV------VVVDVSVSGKETENV 60
R++ +GTADTK EEL +L+ V + + VDV V+VD+S E V
Sbjct: 3 RIYVVGTADTKGEELVYLASCVEA-----AGGRPVLVDVGTRRPTVLVDIS-----AETV 52
Query: 61 GDFKFVKRKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGL 120
AVLS +DRG AI+ M +A FL A +D +G
Sbjct: 53 AAVHPGGAAAVLS-------------GNDRGTAIAAMGEAFARFLP-ARDDVAGVVGMGG 98
Query: 121 GGSGGTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRV 180
GG TS+I++ + LP+GLPKV+VST+ASG PY+ SD+I++PSV D+ G+N VSRV
Sbjct: 99 GGG--TSIITAGMRRLPLGLPKVMVSTLASGDVGPYVDVSDIIMMPSVTDMAGLNRVSRV 156
Query: 181 VFANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMV 240
+ NA A M R + ASK +G+TMFGVTTPCV A+ ERL K ++ +V
Sbjct: 157 ILKNAAEAITAMA----NRPAEETASKP--AIGLTMFGVTTPCVTAIVERL-KADHDCLV 209
Query: 241 FHATGVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLS 300
FHATG GGRAME L G + GVLDITTTEV D V GGV+ RF A +P V S
Sbjct: 210 FHATGTGGRAMEKLADSGLLSGVLDITTTEVCDLVFGGVLPATEDRFGAIARTDLPYVGS 269
Query: 301 VGALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIR 360
VGALDMVNF A +T+P ++ R ++ HN V+LMRTT +E +I KLN S +R
Sbjct: 270 VGALDMVNFWAPETVPERYSGRLLYRHNPNVTLMRTTPEECAAIGRWIGAKLNLCSGPLR 329
Query: 361 LCLPQNGISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALV 420
+P+ G+SALD G F+DP A L L T + ++ R+++ P +IND +FA+A V
Sbjct: 330 FLIPERGVSALDIEGGAFFDPAADAALFEALETTVNRSDRRRIERLPLHINDPQFAEAAV 389
Query: 421 DSFLEIS 427
++ +I+
Sbjct: 390 AAYRDIA 396
>sp|Q893M2|Y1794_CLOTE UPF0261 protein CTC_01794 OS=Clostridium tetani (strain
Massachusetts / E88) GN=CTC_01794 PE=3 SV=2
Length = 404
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 255/428 (59%), Gaps = 32/428 (7%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKF- 65
++ +GT DTK EE +F+ + ++ +V+DV V VG+ K
Sbjct: 4 KIIILGTLDTKGEEFKFIKDIIEK----------EGLETIVIDVGV-------VGEAKLR 46
Query: 66 --VKRKAVLSCLPESNGKIPDELDD-DRGKAISFMSKALENFLQIAIEDQVLAGVIGLGG 122
+ +K V S I D + DRG A+ M K ++ +++ ++G+I LGG
Sbjct: 47 PNIDKKEVAIVGGSS---IEDLIKKKDRGYAMEVMMKGSAAIVKRLSKEEGISGIISLGG 103
Query: 123 SGGTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVF 182
SGGTS+ S A ++L +G+PKV+VST+ASG T PY+G D+ +I SVVD+ GIN++S +
Sbjct: 104 SGGTSIASYAMRALEVGIPKVMVSTLASGDTRPYVGEKDITMIYSVVDISGINTLSSKIL 163
Query: 183 ANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFH 242
+NA A GMV G+ L+ EK +G TMFGVTT VN KE LE GYE +VFH
Sbjct: 164 SNAAYALIGMVKGKAPELKG-----EKPLIGATMFGVTTKGVNIAKEYLENNGYEVLVFH 218
Query: 243 ATGVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVG 302
ATG GGRAME L++ G+I+GVLD+TTTE D VVGGV+ +R +A + IP V++ G
Sbjct: 219 ATGAGGRAMEDLIRSGYIKGVLDMTTTEWCDEVVGGVLNAGPNRLEAASDMGIPQVVAPG 278
Query: 303 ALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLC 362
ALDMVNFG +T+P +F++R ++ HN V+LMRTT +EN + I KLN++ L
Sbjct: 279 ALDMVNFGPIETVPEEFKKRNLYKHNATVTLMRTTKEENIEIGKVIGEKLNRAKKDTALF 338
Query: 363 LPQNGISALDAPGKPFYDPEATGTLISELRTLIQTNEDR-QVKVYPHNINDSEFADALVD 421
+P G+SA+DA G+ FY E L + L+ + N+D+ Q+ +NIND EFA A+
Sbjct: 339 IPLKGVSAIDAEGEVFYGYEEDKALFNTLKETV--NKDKVQIVEMNNNINDEEFAIAMAK 396
Query: 422 SFLEISGK 429
+ + K
Sbjct: 397 KLINMMEK 404
>sp|Q98GC6|Y3387_RHILO UPF0261 protein mlr3387 OS=Rhizobium loti (strain MAFF303099)
GN=mlr3387 PE=3 SV=1
Length = 397
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 245/422 (58%), Gaps = 30/422 (7%)
Query: 7 RVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVV-VDVSVSGKETENVGDFKF 65
R++ +GTADTK EEL FL+ ++ + A S D + VD+S + + G
Sbjct: 3 RIYVVGTADTKGEELAFLADAIAATGAAVSRVDVGTRDATIPVDISANDIAGHHPG---- 58
Query: 66 VKRKAVLSCLPESNGKIPDELDDDRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGSGG 125
R AVL +DRG A++ M A F Q +A +IG+GG GG
Sbjct: 59 -GRDAVLG-------------GNDRGAAVAAMGVAFARFAQ---SRNDIAAMIGIGGGGG 101
Query: 126 TSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANA 185
TS+++S ++LP+GLPK++VST+ASG T PY+ SD+I++PSV D+ G+N +SRVV NA
Sbjct: 102 TSIVTSGMRALPLGLPKIMVSTLASGDTAPYVDVSDIIMMPSVTDMAGLNRLSRVVLHNA 161
Query: 186 GAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNAVKERLEKEGYETMVFHATG 245
A AGM R K ++G+TMFGVTTPCV + + L + Y+ MVFHATG
Sbjct: 162 AQAIAGMAA------RPAPPPDGKPSIGLTMFGVTTPCVTTIADAL-RSTYDCMVFHATG 214
Query: 246 VGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALD 305
GGR+ME L G + GV+DITTTEV D ++GGV+ RF A +P V SVGALD
Sbjct: 215 TGGRSMEKLADSGLLSGVIDITTTEVCDLLLGGVLPATEDRFGAIARTGLPYVGSVGALD 274
Query: 306 MVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSKIRLCLPQ 365
MVNF A T+P +++ R + HN V+LMRT+ DE + +I +L + +P+
Sbjct: 275 MVNFWAPSTVPERYRGRLFYEHNPNVTLMRTSADECRAIGEWIGTRLALCDGPVHFLIPE 334
Query: 366 NGISALDAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEFADALVDSFLE 425
G+SALD G F+D EA L + I+ N +R+V P +IND EFA A V +FL+
Sbjct: 335 KGVSALDIEGGTFFDREADAVLFEAIERTIKPNANRRVTRLPLHINDPEFAKA-VAAFLD 393
Query: 426 IS 427
I+
Sbjct: 394 IA 395
>sp|Q8FUQ2|Y4168_BRUSU UPF0261 protein BRA1168/BS1330_II1159 OS=Brucella suis biovar 1
(strain 1330) GN=BRA1168 PE=3 SV=1
Length = 418
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 205/419 (48%), Gaps = 38/419 (9%)
Query: 6 PRVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKF 65
PR+ IGT DTK +EL F++ + + V++DVS+ G + +
Sbjct: 8 PRILVIGTGDTKSDELLFMADVIERAGGS----------PVMIDVSILGNPPY---EPAY 54
Query: 66 VKRKAVLSCLPESNGKIPDELDD--DRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGS 123
K E+ G + D D A++ M++ ++ + + G+I LGGS
Sbjct: 55 SKHDVA-----EAAGTTVQAIIDSGDEHSAMALMAEGATALVRGLSQRGQVDGMIALGGS 109
Query: 124 GGTSLISSAFKSLPIGLPKVIVSTVA-SGQTEPYIGTSDLILIPSVVDVCGINSVSRVVF 182
GT L LP+G+PK IVST+A S P DL++I + G+N + R V
Sbjct: 110 LGTDLALDIAAILPLGVPKFIVSTIAYSHLLPPERIAPDLMMILWAGGLYGLNPICRSVL 169
Query: 183 ANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNA---VKERLEKEGYETM 239
+ A G VVG + + S EK +G+T G + C+ +K LEK GY+
Sbjct: 170 SQA----CGAVVGAAKLVEK--PSAEKPLIGMTSLGSS--CLKYMRFLKPELEKRGYDVA 221
Query: 240 VFHATGVGGRAMEAL-VKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLV 298
+FHATG+GGRA EA+ ++GF+ V D EV + G V+ R + IP +
Sbjct: 222 IFHATGMGGRAYEAVAAQKGFV-AVFDFCIQEVTNAESGSVVTSGPDRMENAERAGIPQI 280
Query: 299 LSVGALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSK 358
++ GA+DMV+ A +P +F+ R H HN+ ++ + + ++ + A +A KL ++++
Sbjct: 281 IAPGAVDMVDMPAWQNVPEQFRDRPYHAHNRLIASITVSPEQRRAVARVVAAKLERAAAP 340
Query: 359 IRLCLPQNGISALDAPGKPFYDPEATGTLISELRTLIQ-TNEDRQVKVYPHNINDSEFA 416
+ LP G+ D G+P ++PEA G + E+R + T +V + IN EFA
Sbjct: 341 VAFILPTGGVQERDRNGEPLHEPEALGAFLDEMRGAVSGTITFEEVDAH---INAPEFA 396
>sp|Q8YDP7|Y3128_BRUME UPF0261 protein BMEII0128 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=BMEII0128 PE=3 SV=1
Length = 418
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 204/419 (48%), Gaps = 38/419 (9%)
Query: 6 PRVFCIGTADTKLEELQFLSGSVRSNLATFSNNSSSKVDVVVVDVSVSGKETENVGDFKF 65
PR+ IGT DTK +EL F++ + + V++DVS+ G + +
Sbjct: 8 PRIMVIGTGDTKSDELLFMADVIERAGGS----------PVMIDVSILGNPPY---EPAY 54
Query: 66 VKRKAVLSCLPESNGKIPDELDD--DRGKAISFMSKALENFLQIAIEDQVLAGVIGLGGS 123
K E+ G + D D A++ M++ ++ + + G+I LGGS
Sbjct: 55 SKHDVA-----EAAGTTVQAIIDSGDEHSAMALMAEGATALVRGLSQRGQVDGMIALGGS 109
Query: 124 GGTSLISSAFKSLPIGLPKVIVSTVA-SGQTEPYIGTSDLILIPSVVDVCGINSVSRVVF 182
GT L LP+ +PK IVST+A S P DL++I + G+N + R V
Sbjct: 110 LGTDLALDIAAILPLVVPKFIVSTIAYSHLLPPERIAPDLMMILWAGGLYGLNPICRSVL 169
Query: 183 ANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTPCVNA---VKERLEKEGYETM 239
+ A G VVG + + S EK +G+T G + C+ +K LEK GY+
Sbjct: 170 SQA----CGAVVGAAKLVEK--PSAEKPLIGMTHLGSS--CLKYMRFLKPELEKRGYDVA 221
Query: 240 VFHATGVGGRAMEAL-VKEGFIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLV 298
+FHATG+GGRA EA+ ++GF+ V D EV + G V+ R + IP +
Sbjct: 222 IFHATGMGGRAYEAVAAQKGFV-AVFDFCIQEVTNAESGSVVTSGPDRMENAGRAGIPQI 280
Query: 299 LSVGALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRTTVDENKKFAAFIANKLNQSSSK 358
++ GA+DMV+ A +P +F+ R H HN+ ++ + + ++ + A +A KL ++++
Sbjct: 281 IAPGAVDMVDMPAWQNVPEQFRDRPYHAHNRLIASITVSPEQRRAVARVVAAKLERAAAP 340
Query: 359 IRLCLPQNGISALDAPGKPFYDPEATGTLISELRTLIQ-TNEDRQVKVYPHNINDSEFA 416
+ LP G+ D G+P ++PEA G + E+R + T +V + IN EFA
Sbjct: 341 VAFILPTGGVQEWDRNGEPLHEPEALGAFLDEMRGAVSGTITFEEVDAH---INAPEFA 396
>sp|P55610|Y4PA_RHISN Putative transcriptional regulatory protein y4pA OS=Rhizobium sp.
(strain NGR234) GN=NGR_a02110 PE=4 SV=1
Length = 609
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 150/281 (53%), Gaps = 7/281 (2%)
Query: 471 RPE---TLQRTQAILSKLKYQIDK-GLPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFR 526
RPE L I++ L+ + K ++GA GTG++A+ GG D I+ N+GR R
Sbjct: 12 RPEFSAPLHARAEIIATLRAALGKPNTTLVGAAIGTGMAAQAASRGGADFILALNAGRLR 71
Query: 527 MAGRGSLAGLLPFADANAVVLEMA-NEVLPVVKEVPVLAGVCGTDPFRRVDYFLKQLESI 585
G S+ LL +N VL+ A +E+LP VK VPV G DP ++ L+++
Sbjct: 72 SMGAPSIFSLLALRKSNDFVLDFAQSEILPFVK-VPVFFGASAFDPRCSIEAELERIADA 130
Query: 586 GFFGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKAHKMGLLTTPYAFNEGEAVKMA 645
GF + NFPT DG FR ++E G+G+ E+EM+ A K + T Y EA + A
Sbjct: 131 GFGAIVNFPTSIFLDGRFRADIEGAGLGFQRELEMLRAAQKRNMATLAYVRTVAEAQQAA 190
Query: 646 KAGADIIVAHMGLTTSGSIGAKTALSLDESVDRVQAIADAAHRINPDAIVLCHGGPISSP 705
AG DII ++G G++G++T LSL ++ + + I I+ D + + GGPI SP
Sbjct: 191 TAGVDIINLNLGWNVGGTVGSRTELSLRQAAEYAKIIFRQIRAISEDTLCVLEGGPIVSP 250
Query: 706 SEAEFILKRTKGVHGFYGASSMERLPVEQAITSTMRQYKSI 746
+ + +K G+ G S+++R+P+E ++ +KS+
Sbjct: 251 DQMYEVSALSK-ADGYIGGSTIDRVPLEASMEQITSAFKSV 290
>sp|P55605|Y4OT_RHISN Uncharacterized protein y4oT OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02160 PE=4 SV=1
Length = 196
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 536 LLPFADANAVVL-EMANEVLPVVKEVPVLAGVCGTDPFRRVDYFLKQLESIGFFGVQNFP 594
LLP DAN +L E+ VL E V AGV DPFRR LK LE+ G V NFP
Sbjct: 47 LLPIHDANERLLSELRKGVL---SESQVFAGVFALDPFRRHVDILKALETAGCHRVVNFP 103
Query: 595 TVGLFDGNFRQNLEETGMGYGLEVEMIDKAHKMGLLTTPYAFNEGEAVKMAKAGADIIVA 654
+V DG R +LE+ G G E+ ++ A G T + G A + G ++A
Sbjct: 104 SVTAIDGEMRASLEDFGYGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSGLIA 163
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica
GN=Os06g0597200 PE=2 SV=1
Length = 367
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 46/244 (18%)
Query: 170 DVCGINSVSRVVFANAGAAFAGMVVGRLERLRDFGASKE-KCTVG--ITMFGVTTPCVNA 226
D C +NS A+ A A +VVGR + + G + C G I M P N
Sbjct: 157 DACSVNSS----LASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNR 212
Query: 227 VKERLEKEGYETMVFHATGVGGRAMEALVKEGFIQGVLDITTTEVADYVVGGVMACD--- 283
K R+E G V +G++ G L++ + D+ + G+ ACD
Sbjct: 213 EKVRIEASG-----------------GYVYDGYLNGQLNVARA-IGDWHMEGMKACDGLG 254
Query: 284 --SSRFDATI-----EKKIPLVLSVGALDMVNFGAKDTIPSKFQRRKIHVHNQQVSLMRT 336
S+ + I E + ++ G D+ F +++ + F RRK+ HN V+ +
Sbjct: 255 PLSAEPEVMIRNLTEEDEFLIIGCDGIWDV--FRSQNAV--DFARRKLQEHNDPVTCCKE 310
Query: 337 TVDENKKFAAFIANKLNQSSSKIRLCLPQNGISALDAPGKPFYDPEATGTLISELRTLIQ 396
VDE I K + S + +C L P +P + + EL++ +
Sbjct: 311 LVDEA------IKRKSGDNLSVVVICFNSRPPPVLTTP-RPRVQRSISAEGLRELQSFLD 363
Query: 397 TNED 400
+ D
Sbjct: 364 SLAD 367
>sp|C4Z917|ACKA_EUBR3 Acetate kinase OS=Eubacterium rectale (strain ATCC 33656 / VPI
0990) GN=ackA PE=3 SV=1
Length = 397
Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMID--KAHKMGLLTTPYAFNEGEAVK---MAK 646
N P VG+FD F Q + E YGL E + K + G T ++F EA M
Sbjct: 139 NVPMVGVFDTAFHQTMPEKAYLYGLPYEYYEKYKVRRYGFHGTSHSFVSKEAASYLGMDL 198
Query: 647 AGADIIVAHMG 657
+ IIVAH+G
Sbjct: 199 NNSKIIVAHLG 209
>sp|Q50295|RPOA_MYCPN DNA-directed RNA polymerase subunit alpha OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=rpoA PE=3 SV=1
Length = 327
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 525 FRMAGRGSLAGLLPFADANAVVLEMANEVLPVVKEVPVLAGVCGTDPFRRVDYFLKQLES 584
F++A G+++ + FA A +++E N ++ V + + L + RRV F KQ+E
Sbjct: 211 FKIATNGAISAVDAFAMAAKILIEHLNPIVNVNESIKALNIIQEKAEERRVRSFAKQIEE 270
Query: 585 IGFFGVQNFPTVG---------LFDGNFRQNLEETGMGYGLEVEMIDKAHKMGL 629
+ F V+ F + L + E +G E E+I K H++GL
Sbjct: 271 LD-FTVRTFNCLKRSGIHTLQELLSKSLADIREIRNLGKKSEREIIKKVHELGL 323
>sp|C0QWN8|ACKA_BRAHW Acetate kinase OS=Brachyspira hyodysenteriae (strain ATCC 49526 /
WA1) GN=ackA PE=3 SV=1
Length = 395
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 590 VQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKA--HKMGLLTTPYAFNEGEAVKMA-K 646
+++ VG+FD +F Q + + Y + E DK + G T + + GE K+ K
Sbjct: 139 LKDVKMVGVFDTSFHQTIPDYAYMYAVPHEWYDKYKIRRYGFHGTSHKYVYGEFCKVTNK 198
Query: 647 AGADIIVAHMGLTTSGSIGAKTALSLDESVD 677
A++IV H+G S TA+ ES+D
Sbjct: 199 PNANVIVCHLGNGAS-----VTAVKNGESID 224
>sp|Q8VCC9|SPON1_MOUSE Spondin-1 OS=Mus musculus GN=Spon1 PE=2 SV=1
Length = 807
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 363 LPQNGI---SALDAPGKPFYDPEATGTLISELRTLIQ--TNEDRQVKVYPHNIND 412
+PQ I ++LD P PFYDPE G++ R +I+ + Q + P N++D
Sbjct: 371 IPQEKIRPLTSLDHPQSPFYDPEG-GSITQVARVVIERIARKGEQCNIVPDNVDD 424
>sp|P35446|SPON1_RAT Spondin-1 OS=Rattus norvegicus GN=Spon1 PE=1 SV=1
Length = 807
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 363 LPQNGI---SALDAPGKPFYDPEATGTLISELRTLIQ--TNEDRQVKVYPHNIND 412
+PQ I ++LD P PFYDPE G++ R +I+ + Q + P N++D
Sbjct: 371 IPQEKIRPLTSLDHPQSPFYDPEG-GSITQVARVVIERIARKGEQCNIVPDNVDD 424
>sp|Q9GLX9|SPON1_BOVIN Spondin-1 OS=Bos taurus GN=SPON1 PE=1 SV=1
Length = 807
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 363 LPQNGI---SALDAPGKPFYDPEATGTLISELRTLIQ--TNEDRQVKVYPHNIND 412
+PQ I ++LD P PFYDPE G++ R +I+ + Q + P N++D
Sbjct: 371 IPQEKIRPLTSLDHPQSPFYDPEG-GSITQVARVVIERIARKGEQCNIVPDNVDD 424
>sp|Q9HCB6|SPON1_HUMAN Spondin-1 OS=Homo sapiens GN=SPON1 PE=1 SV=2
Length = 807
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 363 LPQNGI---SALDAPGKPFYDPEATGTLISELRTLIQ--TNEDRQVKVYPHNIND 412
+PQ I ++LD P PFYDPE G++ R +I+ + Q + P N++D
Sbjct: 371 IPQEKIRPLTSLDHPQSPFYDPEG-GSITQVARVVIERIARKGEQCNIVPDNVDD 424
>sp|B8FM51|DER_DESAA GTPase Der OS=Desulfatibacillum alkenivorans (strain AK-01) GN=der
PE=3 SV=1
Length = 445
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)
Query: 110 EDQVLAGVIGLGGSGGTSLISSAFKSLPIGLPKVIVSTVASGQTEPYIGTSDLILIPSVV 169
ED + GV+G +G +SLI+ +G +++VS G T + T
Sbjct: 171 EDMISIGVVGRPNAGKSSLINKI-----LGQERLLVSD-TPGTTRDAVDT---------- 214
Query: 170 DVCGINSVSRVVFANAGAAFAGMVVGRLERLRDFGASK--EKCTVGITMFGVT 220
VC +N ++ AG G V +LE+ A K E+C V + M T
Sbjct: 215 -VCQVNGKPYLLLDTAGIRRKGKVKHKLEKFSIVRALKGLERCDVALVMLDAT 266
>sp|Q9PIL7|CARB_CAMJE Carbamoyl-phosphate synthase large chain OS=Campylobacter jejuni
subsp. jejuni serotype O:2 (strain NCTC 11168) GN=carB
PE=3 SV=1
Length = 1089
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 182 FANAGAAFAGMVVGRLERLRDFGASKEKCTVGITMFGVTTP---CVNAVKERLEKE---G 235
FA +AF ++G R+ D ++K IT G+ P +V+E + K G
Sbjct: 651 FAKRLSAFGAKIIGTSARVIDMAEDRKKFAEFITKLGINQPKNSTATSVEEAVLKASDIG 710
Query: 236 YETMVFHATGVGGRAMEALVKEG----FIQGVLDIT 267
Y +V + +GGRAM + E ++Q +D++
Sbjct: 711 YPVLVRPSYVLGGRAMRVVNDEAELRLYMQEAVDVS 746
>sp|Q7NXU5|ACKA_CHRVO Acetate kinase OS=Chromobacterium violaceum (strain ATCC 12472 /
DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC
9757) GN=ackA PE=3 SV=1
Length = 397
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMI--DKAHKMGLLTTPYAFNEGEAVKMAKAGA 649
+ P V +FD +F Q + E Y + +++ + + G+ T Y F EA KM A
Sbjct: 136 SLPQVAVFDTSFHQTMPEKAYLYAVPMKLYRENSLRRYGMHGTSYRFVAEEAAKMLGKPA 195
Query: 650 D---IIVAHMG 657
+ +++AH+G
Sbjct: 196 NETSLVIAHLG 206
>sp|A9KNV3|ACKA_CLOPH Acetate kinase OS=Clostridium phytofermentans (strain ATCC 700394 /
DSM 18823 / ISDg) GN=ackA PE=3 SV=1
Length = 395
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMID--KAHKMGLLTTPYAFNEGEAVKMAKA-- 647
N P V +FD F Q + + YG+ E D K + G T +++ A +A
Sbjct: 139 NVPMVAVFDTAFHQTMPKEAYLYGIPFEYYDKYKVRRYGFHGTSHSYVSKRATTLAGLDV 198
Query: 648 -GADIIVAHMGLTTSGSIGA-KTALSLDESVDRVQ----AIADAAHRINPDAIVLCHGGP 701
+ +IV H+G SI A K S+D S+ + + ++P I
Sbjct: 199 NNSKVIVCHLG--NGASISAVKNGESVDTSMGLTPLEGLIMGTRSGDLDPAIIDFVAKKE 256
Query: 702 ISSPSEAEFILKRTKGVHGFYGASS 726
S E IL + GV G G SS
Sbjct: 257 NLSLDEVMNILNKKSGVLGMSGVSS 281
>sp|B1W052|ACKA_STRGG Acetate kinase OS=Streptomyces griseus subsp. griseus (strain JCM
4626 / NBRC 13350) GN=ackA PE=3 SV=1
Length = 412
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKAHKM---GLLTTPYAF---NEGEAVKMA 645
+ P V +FD F + E Y ++VE D AH++ G T +A+ E + A
Sbjct: 144 DLPQVAVFDTAFHTTMPEAAARYAIDVETAD-AHRIRRYGFHGTSHAYVSRKTAELLGRA 202
Query: 646 KAGADIIVAHMGLTTSGS 663
++IV H+G S S
Sbjct: 203 PEDVNVIVLHLGNGASAS 220
>sp|Q92CN9|ACKA2_LISIN Acetate kinase 2 OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=ackA2 PE=3 SV=1
Length = 397
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKAH--KMGLLTTPYAFNEGEAVKMAKAGA 649
N +V +FD F Q + E Y L E+ +K H K G T + + G+A ++ K
Sbjct: 138 NAVSVAVFDTAFHQTIPEENFLYALPYELYEKHHIRKYGFHGTSHKYVAGKAAEVLKKPL 197
Query: 650 D---IIVAHMG 657
+ II H+G
Sbjct: 198 EKLKIISCHLG 208
>sp|P0CN94|GPN3_CRYNJ GPN-loop GTPase 3 homolog CNB04680 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CNB04680 PE=3 SV=1
Length = 287
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 259 FIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDMVNFGAKDTIPSK 318
F+ L+ T+ V Y++ D S+F A + + +LS+G + D + K
Sbjct: 123 FLSTSLNFRTSAV--YLIDSQFMQDKSKFFAGVMSAMSCMLSLGISMLCLMSKMDLVKDK 180
Query: 319 FQRRKIHV---HNQQVSLMRTTVDE--NKKFAAFIANKLNQSSSKIRLCLPQNGIS--AL 371
R K V + +L+ +++ N KF N+LN++ + L QN +S L
Sbjct: 181 KGRTKREVGRYLDPDPNLLLEDINQGTNSKF-----NQLNRAV--VSLIEDQNIVSFLPL 233
Query: 372 DAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEF 415
D + ++ T++S + ++Q ED + KV P +++D EF
Sbjct: 234 DVTSE-----DSVNTVLSHIDNMMQYGEDEEPKV-PKDMDDGEF 271
>sp|P0CN95|GPN3_CRYNB GPN-loop GTPase 3 homolog CNBB1090 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CNBB1090 PE=3
SV=1
Length = 287
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 259 FIQGVLDITTTEVADYVVGGVMACDSSRFDATIEKKIPLVLSVGALDMVNFGAKDTIPSK 318
F+ L+ T+ V Y++ D S+F A + + +LS+G + D + K
Sbjct: 123 FLSTSLNFRTSAV--YLIDSQFMQDKSKFFAGVMSAMSCMLSLGISMLCLMSKMDLVKDK 180
Query: 319 FQRRKIHV---HNQQVSLMRTTVDE--NKKFAAFIANKLNQSSSKIRLCLPQNGIS--AL 371
R K V + +L+ +++ N KF N+LN++ + L QN +S L
Sbjct: 181 KGRTKREVGRYLDPDPNLLLEDINQGTNSKF-----NQLNRAV--VSLIEDQNIVSFLPL 233
Query: 372 DAPGKPFYDPEATGTLISELRTLIQTNEDRQVKVYPHNINDSEF 415
D + ++ T++S + ++Q ED + KV P +++D EF
Sbjct: 234 DVTSE-----DSVNTVLSHIDNMMQYGEDEEPKV-PKDMDDGEF 271
>sp|Q5WED5|ACKA_BACSK Acetate kinase OS=Bacillus clausii (strain KSM-K16) GN=ackA PE=3
SV=1
Length = 395
Score = 33.5 bits (75), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 46/188 (24%)
Query: 501 GTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVVKEV 560
G GI A EE G+ V++ +F ++VV+ +EVL ++EV
Sbjct: 73 GRGIIASLEEIEGIGHRVVHGGEKFN----------------DSVVI--TDEVLQGIEEV 114
Query: 561 PVLA------GVCGTDPFRRVDYFLKQLESIGFFGVQNFPTVGLFDGNFRQNLEETGMGY 614
LA + G F+ V + N P V +FD F Q + E+ Y
Sbjct: 115 SELAPLHNPANITGIKAFKEV--------------LPNVPAVAVFDTAFHQTMPESAFLY 160
Query: 615 GLEVEMIDK--AHKMGLLTTPYAFNEGEAVKMAKAGAD---IIVAHMGLTTSGSIGA-KT 668
L E +K K G T + + A ++ + + I+ H+G SI A K
Sbjct: 161 SLPYEYYEKYGIRKYGFHGTSHKYVTHRAAELMETPIEELRILSCHLG--NGASIAAVKG 218
Query: 669 ALSLDESV 676
S+D S+
Sbjct: 219 GKSIDTSM 226
>sp|B9JR03|PYRD_AGRVS Dihydroorotate dehydrogenase (quinone) OS=Agrobacterium vitis
(strain S4 / ATCC BAA-846) GN=pyrD PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 475 LQRTQAILSKLKYQIDKGLPIIGAGAGTGISAKFEE-AGGVDLIVLYN 521
+++ A+L+++++++ LPIIG G + E+ G DL+ LY+
Sbjct: 271 FEKSTAVLARMRHRVGSALPIIGVGGVSSAQTALEKIKAGADLVQLYS 318
>sp|Q14940|SL9A5_HUMAN Sodium/hydrogen exchanger 5 OS=Homo sapiens GN=SLC9A5 PE=1 SV=2
Length = 896
Score = 33.5 bits (75), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 145 VSTVASGQTEPYIGTSDLILIPSVVDVCGINSVSRVVFANAGAAFAGMVVGRLERLRDFG 204
V+ A Q EP GT L L+P +V G SR+ F N GA VVG L G
Sbjct: 94 VAKKAEYQLEP--GTFFLFLLPPIVLDSGYFMPSRLFFDNLGAILTYAVVGTLWNAFTTG 151
Query: 205 ASKEKCTVGITMFGVTTPCVNA 226
A+ G+ G+ P V A
Sbjct: 152 AA----LWGLQQAGLVAPRVQA 169
>sp|A6TRU6|ACKA_ALKMQ Acetate kinase OS=Alkaliphilus metalliredigens (strain QYMF)
GN=ackA PE=3 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKAHKM---GLLTTPY---AFNEGEAVKMA 645
N P VG+FD F Q + E+ Y L E+ +K HK+ G T + A E ++
Sbjct: 140 NVPMVGVFDTAFHQTMPESSYMYALPYELYEK-HKIRRYGFHGTSHKYVAMKAAEILERP 198
Query: 646 KAGADIIVAHMGLTTS-----GSIGAKTALSLDESVDRVQAIADAAHRINPDAIVLCHGG 700
II H+G S G I T++ V + ++P +
Sbjct: 199 IEDLKIIACHLGNGASITAVDGGISVDTSMGFTPLEGLV--MGTRCGDMDPAIVTFLMEK 256
Query: 701 PISSPSEAEFILKRTKGVHGFYGASS 726
++ I+ + GV+G G SS
Sbjct: 257 EKIDHNQVNAIMNKQSGVYGLSGVSS 282
>sp|Q03IZ7|ADDB_STRTD ATP-dependent helicase/deoxyribonuclease subunit B OS=Streptococcus
thermophilus (strain ATCC BAA-491 / LMD-9) GN=rexB PE=3
SV=1
Length = 1106
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 400 DRQVKVYPHNINDSEFADALVDSFLEISGKNLMAFSSAHHVSCERHEDSVSNIYSSSHGT 459
D ++KVY DS F + LVD + E+ N+ H E+ ED V I+S++
Sbjct: 99 DDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLNQVEKQEDLV-RIFSAAQDL 157
Query: 460 IC 461
+
Sbjct: 158 LL 159
>sp|Q5M2T6|ADDB_STRT2 ATP-dependent helicase/deoxyribonuclease subunit B OS=Streptococcus
thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rexB
PE=3 SV=1
Length = 1106
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 400 DRQVKVYPHNINDSEFADALVDSFLEISGKNLMAFSSAHHVSCERHEDSVSNIYSSSHGT 459
D ++KVY DS F + LVD + E+ N+ H E+ ED V I+S++
Sbjct: 99 DDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLV-RIFSAAQDL 157
Query: 460 IC 461
+
Sbjct: 158 LL 159
>sp|Q5LY79|ADDB_STRT1 ATP-dependent helicase/deoxyribonuclease subunit B OS=Streptococcus
thermophilus (strain CNRZ 1066) GN=rexB PE=3 SV=1
Length = 1106
Score = 33.1 bits (74), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 400 DRQVKVYPHNINDSEFADALVDSFLEISGKNLMAFSSAHHVSCERHEDSVSNIYSSSHGT 459
D ++KVY DS F + LVD + E+ N+ H E+ ED V I+S++
Sbjct: 99 DDELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLV-RIFSAAQDL 157
Query: 460 IC 461
+
Sbjct: 158 LL 159
>sp|Q4ULU8|Y624_RICFE Uncharacterized protein RF_0624 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=RF_0624 PE=4 SV=1
Length = 856
Score = 33.1 bits (74), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 50 VSVSGKETENVG--DFKFVKRKAVLSCLPESNGKIPDELDDDRGKAISFMSKAL---ENF 104
++++G++ + +G D + + ++ L G IP + + + G + + ++L EN
Sbjct: 691 LNIAGQDIKIIGIADRIEISKSNHITILDYKTGTIPTKKEIELGLSPQLIIESLMLLENG 750
Query: 105 LQIAIEDQVLAGV-IGLGGSGGTSLISSAFKSLPIGLPKVIVSTVASGQ---TEPYIGTS 160
I E+ ++ V +G G T +I S +G PK I T+A + TEPY+ T+
Sbjct: 751 FNIKNENTIVNSVGLGYKARGATPIIIGETTSNDVGKPKSIDYTIAYVKITSTEPYVQTT 810
Query: 161 DLIL 164
++ L
Sbjct: 811 EIAL 814
>sp|P71104|ACKA_CLOAB Acetate kinase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM
792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=ackA PE=3
SV=2
Length = 401
Score = 33.1 bits (74), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 592 NFPTVGLFDGNFRQNLEETGMGYGLEVEMIDKA--HKMGLLTTPYAFNEGEAVK-MAKAG 648
N P V +FD F Q + + Y + E DK K G T + + A + + K
Sbjct: 139 NVPMVAVFDTAFHQTIPDYAYMYAIPYEYYDKYKIRKYGFHGTSHKYVSRTAAEFIGKKV 198
Query: 649 ADI--IVAHMGLTTSGSIGAKTALSLDESVDRVQ--------AIADAAHRINPDAIVLCH 698
D+ +V HMG SI TA+ +SVD A+ + ++P +
Sbjct: 199 EDLKMVVCHMG--NGASI---TAVENGKSVDTSMGFTPLGGLAMGTRSGDMDPAVVTFLM 253
Query: 699 GGPISSPSEAEFILKRTKGVHGFYGASSMER 729
+ SE +L + G+ G G SS R
Sbjct: 254 DKLNINASEVNNLLNKKSGIEGLSGISSDMR 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 271,005,695
Number of Sequences: 539616
Number of extensions: 11956879
Number of successful extensions: 37701
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 37627
Number of HSP's gapped (non-prelim): 66
length of query: 749
length of database: 191,569,459
effective HSP length: 125
effective length of query: 624
effective length of database: 124,117,459
effective search space: 77449294416
effective search space used: 77449294416
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)