Citrus Sinensis ID: 004496

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------75
MKGRESHPLLRGGRRVSSYSHGFSSSEIESLAAICQTLVPPLPPETITKQHSHNQAIVSFYKASASQHPIPHEVAELMVKRGQPQAVFLARLILTLLSFRLGTLLLCGYLCFDWNWPFIHNFSEISLEKREKILKKWSRERYLLPLRIVFVMIKMFCLFDFFARTDEKSENPAWEAIGYHVDTREPSNKPRGERPLQKGIVETVHENENDHSLFQRLVDHGLQVTVDHEHNLFEIKCDVVVVGSGCGGGVAAAVLASSGQKVLVLEKGNYFVAEDYSSLEGPSMHELYESGGLLSTLDGKFMVFAGSAVGGGSAVNWSACIETPDSVLRDWFVEHKIPLFGSLDYRAAMDKVSKRIGVTEHCTEEGFQNQVLRKGCENLGFKVESVARNTPEEHYCGSCNYGCRTGDKKGTDVTWLVDAVDNGAVILAGFKAEKFILVDNKDSIRSKKCLGVTATALNKNVTRKLQIKAKATISACGSLLTPPLMISSGLENPNIGTNLHLHPVLLAWGYIPDHVSELKGKTFEGGIITSIHKVVSEDSKVQAIIESPAMGPASFAASFPWISGRELKDRMLRYGRIAQLFALVRDQGSGEVKVEGKIKYRLSKNDKENLKTGLRQALRILIAAGAEEVGTYRSDGHRIRCKGIKEEDLEEFIGSIEVVGGMASRGEHWSVYFSAHQMGSCRMGATEEDGAVDENGESWEAEGLFVCDGSVLPSAIGINPMITIESTSYCISKKIADSLKKDIRSTEN
ccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccEEEEccccHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHccccccCCcccccEEEEEccECcccHHccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHccccEEEccEEEEEEEEcccccCEEEEEEEEEEEEcccccEEEEEEEccEEEEcccccccHHHHHHccccccccccccccccccEEEEECcccccccccccccccEEEEEcEEccccccccEEEEccccccHHHHHcccccccHHHHHHHHHccccEEEEEEEEEccccEEEEccEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEcccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccc
*******************SHGFSSSEIESLAAICQTLVPPL************QAIVSFYKASASQHPIPHEVAELMVKRGQPQAVFLARLILTLLSFRLGTLLLCGYLCFDWNWPFIHNFSEISLEKREKILKKWSRERYLLPLRIVFVMIKMFCLFDFFARTDEKSENPAWEAIGYHV******************IVETVHENENDHSLFQRLVDHGLQVTVDHEHNLFEIKCDVVVVGSGCGGGVAAAVLASSGQKVLVLEKGNYFVAEDYSSLEGPSMHELYESGGLLSTLDGKFMVFAGSAVGGGSAVNWSACIETPDSVLRDWFVEHKIPLFGSLDYRAAMDKVSKRIGVTEHCTEEGFQNQVLRKGCENLGFKVESVARNTPEEHYCGSCNYGCRTGDKKGTDVTWLVDAVDNGAVILAGFKAEKFILVDNKDSIRSKKCLGVTATALNKNVTRKLQIKAKATISACGSLLTPPLMISSGLENPNIGTNLHLHPVLLAWGYIPDHVSELKGKTFEGGIITSIHKVVSEDSKVQAIIESPAMGPASFAASFPWISGRELKDRMLRYGRIAQLFALVRDQGSGEVKVEGKIKYRLSKNDKENLKTGLRQALRILIAAGAEEVGTYRSDGHRIRCKGIKEEDLEEFIGSIEVVGGMASRGEHWSVYFSAHQMGSCRMGATEEDGAVDENGESWEAEGLFVCDGSVLPSAIGINPMITIESTSYCISKKI*************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MKGRESHPLLRGGRRVSSYSHGFSSSEIESLAAICQTLVPPLPPETITKQHSHNQAIVSFYKASASQHPIPHEVAELMVKRGQPQAVFLARLILTLLSFRLGTLLLCGYLCFDWNWPFIHNFSEISLEKREKILKKWSRERYLLPLRIVFVMIKMFCLFDFFARTDEKSENPAWEAIGYHVDTREPSNKPRGERPLQKGIVETVHENENDHSLFQRLVDHGLQVTVDHEHNLFEIKCDVVVVGSGCGGGVAAAVLASSGQKVLVLEKGNYFVAEDYSSLEGPSMHELYESGGLLSTLDGKFMVFAGSAVGGGSAVNWSACIETPDSVLRDWFVEHKIPLFGSLDYRAAMDKVSKRIGVTEHCTEEGFQNQVLRKGCENLGFKVESVARNTPEEHYCGSCNYGCRTGDKKGTDVTWLVDAVDNGAVILAGFKAEKFILVDNKDSIRSKKCLGVTATALNKNVTRKLQIKAKATISACGSLLTPPLMISSGLENPNIGTNLHLHPVLLAWGYIPDHVSELKGKTFEGGIITSIHKVVSEDSKVQAIIESPAMGPASFAASFPWISGRELKDRMLRYGRIAQLFALVRDQGSGEVKVEGKIKYRLSKNDKENLKTGLRQALRILIAAGAEEVGTYRSDGHRIRCKGIKEEDLEEFIGSIEVVGGMASRGEHWSVYFSAHQMGSCRMGATEEDGAVDENGESWEAEGLFVCDGSVLPSAIGINPMITIESTSYCISKKIADSLKKDIRSTEN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Long-chain-alcohol oxidase FAO4B Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.probableQ94BP3
Long-chain-alcohol oxidase FAO2 Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.probableB5WWZ9
Long-chain-alcohol oxidase FAO1 Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.probableB5WWZ8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.3.-With oxygen as acceptor.probable
1.1.3.20Long-chain-alcohol oxidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N4W, chain A
Confidence level:confident
Coverage over the Query: 238-532,544-625,654-744
View the alignment between query and template
View the model in PyMOL
Template: 3PL8, chain A
Confidence level:probable
Coverage over the Query: 236-638,672-744
View the alignment between query and template
View the model in PyMOL