BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004499
(748 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7P8|LHWL1_ARATH Transcription factor EMB1444 OS=Arabidopsis thaliana GN=EMB1444
PE=2 SV=1
Length = 734
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 356/763 (46%), Positives = 464/763 (60%), Gaps = 57/763 (7%)
Query: 8 FDLHGILKSLCFNTAWKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCSSESLENF 67
+ L IL+S+C NT W YAVFWKL H + MVLT ED Y N E ESL
Sbjct: 3 YTLQQILRSICSNTDWNYAVFWKLNHHSPMVLTLEDVYCVN------HERGLMPESL--- 53
Query: 68 HGGRYSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDQLVTNSCSSFEFSDGW 127
HGGR++HDPLGLAVAKMSYHV+SLGEGIVGQVA++G+HQWIFS+ L +S S+ + +GW
Sbjct: 54 HGGRHAHDPLGLAVAKMSYHVHSLGEGIVGQVAISGQHQWIFSEYL-NDSHSTLQVHNGW 112
Query: 128 QSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVFAALNDISVGHVSSTIQ 187
+SQ SAGI+TI +VAV GVVQLGSL +V ED +VTHIR +F AL D H S+ +Q
Sbjct: 113 ESQISAGIKTILIVAVGSCGVVQLGSLCKVEEDPALVTHIRHLFLALTDPLADHASNLMQ 172
Query: 188 SSVKNTLSLPDLPTKTI----PNRWHNLDEVVNRGG---------------PDVQLPMFP 228
+ + P +P+K + P+ D+ ++ G P P +
Sbjct: 173 CDINSPSDRPKIPSKCLHEASPDFSGEFDKAMDMEGLNIVSQNTSNRSNDLPYNFTPTYF 232
Query: 229 YVEKHNDGSYAFSGMQPKIGDGVVNRNEGILLSSAGGVGSAKILHPKSNVINLDYQNQMG 288
++E+ +QP + N+ + +S VG V++ ++NQ+
Sbjct: 233 HMERTAQVIGGLEAVQPSM----FGSNDCV--TSGFSVG----------VVDTKHKNQVD 276
Query: 289 IHFISDGMSRVESSGWKDLGVISEQNGTPFSINSVIDSINLCSVALQAEKFVADRTYLAS 348
I +S + E+ G++ + + N +S N V +S ++A+++++ A +Y
Sbjct: 277 ISDMSKVIYDEETGGYRYSREL-DPNFQHYSRNHVRNSGGTSALAMESDRLKAGSSYPQ- 334
Query: 349 NPLEAVLGEQVKLECTDSCQNGMLHIPEISDIKFEKDLEKLQNQ-TELNHLDPSGMSLKF 407
L++ + +K + S +N + E F KD E Q + +E + LD SL
Sbjct: 335 --LDSTVLTALKTDKDYSRRNEVFQPSESQGSIFVKDTEHRQEEKSESSQLDALTASLCS 392
Query: 408 SAVSELHEALGPAFLRKDIYNDREPENTVDGETVGMPELTSSSHLMFDSGSENLLDAVVA 467
+ SEL EALGPAF K + E + S SHL F+S SENLLDAVVA
Sbjct: 393 FSGSELLEALGPAF-SKTSTDYGELAKFESAAAIRRTNDMSHSHLTFESSSENLLDAVVA 451
Query: 468 SVCNSGSDVKSERTFCRSMQSLLTTEKKPESSSQSKNTNNSVSYS---ISQSSLVEEDAK 524
S+ N +V+ E + RS QSLLTT + ++ N N VS ISQ L + +
Sbjct: 452 SMSNGDGNVRREISSSRSTQSLLTTAEMAQAEPFGHNKQNIVSTVDSVISQPPLADGLIQ 511
Query: 525 HFLNSSEVCGAVSSKGFSSTCPSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQ 584
N S +CGA SS GFSSTC S+ S+Q S E K NKKRA+ GE+ RPRPRDRQLIQ
Sbjct: 512 Q--NPSNICGAFSSIGFSSTCLSSSSDQFPTSLEIPKKNKKRAKPGESSRPRPRDRQLIQ 569
Query: 585 DRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITKHADKLSKCAESKMHQKGNGIHG- 643
DRIKELRELVPNGSKCSIDSLLE TIKHMLFLQS+++HADKL+K A SKM K G G
Sbjct: 570 DRIKELRELVPNGSKCSIDSLLECTIKHMLFLQSVSQHADKLTKSASSKMQHKDTGTLGI 629
Query: 644 SNYEQGSSWAVEMGSHLKVCSIVVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTIL 703
S+ EQGSSWAVE+G HL+VCSI+VENL+K G ML+EMLCEECSHFLEIA IRSL L IL
Sbjct: 630 SSTEQGSSWAVEIGGHLQVCSIMVENLDKEGVMLIEMLCEECSHFLEIANVIRSLELIIL 689
Query: 704 KGVTEAHGDKTWICFVVEGQDNRIMHRMDVLWSLVQLLQSKTT 746
+G TE G+KTWICFVVEGQ+N++MHRMD+LWSLVQ+ Q K T
Sbjct: 690 RGTTEKQGEKTWICFVVEGQNNKVMHRMDILWSLVQIFQPKAT 732
>sp|Q58G01|LHWL3_ARATH Transcription factor bHLH155 OS=Arabidopsis thaliana GN=BHLH155
PE=2 SV=1
Length = 720
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 343/748 (45%), Positives = 461/748 (61%), Gaps = 54/748 (7%)
Query: 13 ILKSLCFNTAWKYAVFWKLKHR-TRMVLTWEDGYYDNCGQQDSLENKCSSESLENFHGGR 71
ILKS CFNT W YAVFW+L HR +RMVLT ED YYD+ G N HG
Sbjct: 8 ILKSFCFNTDWDYAVFWQLNHRGSRMVLTLEDAYYDHHGT--------------NMHG-- 51
Query: 72 YSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDQLVTNSC-SSFEFSDGWQSQ 130
+HDPLGLAVAKMSYHVYSLGEGIVGQVAV+G+HQW+F + N+C S+FEF + W+SQ
Sbjct: 52 -AHDPLGLAVAKMSYHVYSLGEGIVGQVAVSGEHQWVFPENY--NNCNSAFEFHNVWESQ 108
Query: 131 FSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVFAALNDISVGHVSSTIQSSV 190
SAGI+TI VVAV P GVVQLGSL +V ED+ V HIR +F AL D H ++ Q ++
Sbjct: 109 ISAGIKTILVVAVGPCGVVQLGSLCKVNEDVNFVNHIRHLFLALRDPLADHAANLRQCNM 168
Query: 191 KNTLSLPDLPTK-----TIPNRWHNLDEVVNRGGPDVQLPMFPYVEKHNDG---SYAFSG 242
N+L LP +P++ P+ +D+ ++ ++ + Y + +D + S
Sbjct: 169 NNSLCLPKMPSEGLHAEAFPDCSGEVDKAMDVEESNI---LTQYKTRRSDSMPYNTPSSC 225
Query: 243 MQPKIGDGVVNRNEGILLSSAGGVGSAKILHPKSNVINLDYQNQMGIHFISDGMSRVESS 302
+ + VV E + S+ G P +++ ++NQ+G + I D +S
Sbjct: 226 LVMEKAAQVVGGREVVQGSTCGSYSGVTFGFP-VDLVGAKHENQVGTNIIRDAPHVGMTS 284
Query: 303 GWKDLGVISEQNGTPFSINSVIDSINLCSVALQAEKFVADRTYLASNPLEAVLGEQVKLE 362
G KD + + N + N V++ + ++A++AE+ + ++Y L++ + +
Sbjct: 285 GCKDSRDL-DPNLHLYMKNHVLNDTSTSALAIEAERLITSQSYPR---LDSTFQATSRTD 340
Query: 363 CTDSCQNGMLHIPEISDIKFEKDLEKLQNQ----TELNHLDPSGMSLKFSAVSELHEALG 418
S N + + E K+ K+ E++ + ++ + L SG + A SEL EALG
Sbjct: 341 KESSYHNEVFQLSENQGNKYIKETERMLGRNCESSQFDALISSGYTF---AGSELLEALG 397
Query: 419 PAFLRKDIYNDREPENTVDGETVGMPELTSSSHLMFDSGSENLLDAVVASVCNSGSDVKS 478
AF + + E + G T+ + S S L FD G ENLLDAVVA+VC + +
Sbjct: 398 SAFKQTNT-GQEELLKSEHGSTMRPTDDMSHSQLTFDPGPENLLDAVVANVCQRDGNARD 456
Query: 479 ERTFCRSMQSLLTTEKKPESSSQSK-NTNNSVSYSISQSSLVEEDAKHFLNSSEVCGAVS 537
+ RS+QSLLT + E S Q K N N ++ +++Q + E D + NSS++CGA S
Sbjct: 457 DMMSSRSVQSLLTNMELAEPSGQKKHNIVNPINSAMNQPPMAEVDTQQ--NSSDICGAFS 514
Query: 538 SKGFSSTCPSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQDRIKELRELVPNG 597
S GFSST PS+ S+Q S + K NKKRA+ GE+ RPRPRDRQLIQDRIKELRELVPNG
Sbjct: 515 SIGFSSTYPSSSSDQFQTSLDIPKKNKKRAKPGESSRPRPRDRQLIQDRIKELRELVPNG 574
Query: 598 SKCSIDSLLERTIKHMLFLQSITKHADKLSKCAESKMHQKGNGIHGSNYEQGSSWAVEMG 657
SKCSIDSLLERTIKHMLFLQ++TKHA+KLSK A KM QK G+ QGSS AVE+G
Sbjct: 575 SKCSIDSLLERTIKHMLFLQNVTKHAEKLSKSANEKMQQKETGM------QGSSCAVEVG 628
Query: 658 SHLKVCSIVVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGVTEAHGDKTWIC 717
HL+V SI+VENLNK G +L+EMLCEEC HFLEIA IRSL L IL+G TE G+KTWIC
Sbjct: 629 GHLQVSSIIVENLNKQGMVLIEMLCEECGHFLEIANVIRSLDLVILRGFTETQGEKTWIC 688
Query: 718 FVVEGQDNRIMHRMDVLWSLVQLLQSKT 745
FV E Q++++M RMD+LWSLVQ+ Q K
Sbjct: 689 FVTESQNSKVMQRMDILWSLVQIFQPKA 716
>sp|Q9XIN0|LHW_ARATH Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=1
Length = 650
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 188/303 (62%), Gaps = 25/303 (8%)
Query: 444 PELTSSSHLMFDSGSENLLDAVVASVCNSGSDVKSERTFCRSMQSLLTTEKKPESSSQSK 503
PE SS + + SG+++LLDAVV+ C+S + E + +S TT K +SS +
Sbjct: 339 PEFGSSGYEL--SGTDHLLDAVVSGACSSTKQISDETS-----ESCKTTLTKVSNSSVTT 391
Query: 504 NTNNSVSYSISQSSLVEEDAKHFLNSSEVCGAVSSKGF--SSTCPSTCSEQLDRSSEPAK 561
+++S S L E+ L S V G+ S + + S ++ +E AK
Sbjct: 392 PSHSSPQ----GSQLFEKKHGQPLGPSSVYGSQISSWVEQAHSLKREGSPRMVNKNETAK 447
Query: 562 --NNKKRARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSI 619
NN+KR + GEN RPRP+DRQ+IQDR+KELRE++PNG+KCSID+LLERTIKHMLFLQ++
Sbjct: 448 PANNRKRLKPGENPRPRPKDRQMIQDRVKELREIIPNGAKCSIDALLERTIKHMLFLQNV 507
Query: 620 TKHADKLSKCAESKMHQKGNGIHGSNYEQGSSWAVEMGSHLKVCSIVVENLNKNGQMLVE 679
+KH+DKL + ESK+ ++ G G++WA E+GS VC IVVE++N VE
Sbjct: 508 SKHSDKLKQTGESKIMKEDGG--------GATWAFEVGSKSMVCPIVVEDINPPRIFQVE 559
Query: 680 MLCEECSHFLEIAEAIRSLGLTILKGVTEAHGDKTWICFVVEGQDNRIMHRMDVLWSLVQ 739
MLCE+ FLEIA+ IRSLGLTILKGV E DK W F VE +R + RM++ LV
Sbjct: 560 MLCEQRGFFLEIADWIRSLGLTILKGVIETRVDKIWARFTVEA--SRDVTRMEIFMQLVN 617
Query: 740 LLQ 742
+L+
Sbjct: 618 ILE 620
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 10 LHGILKSLCFNTAWKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCSSESLENFHG 69
L L+S+C N W YAVFWK+ + +L WE+ Y + E+ + L
Sbjct: 5 LREALRSMCVNNQWSYAVFWKIGCQNSSLLIWEECYNET-------ESSSNPRRLCGLGV 57
Query: 70 GRYSHDPLGLAVAKMSYH--VYSLGEGIVGQVAVTGKHQWIFSDQLVTNSCSSFEFSDGW 127
++ + L +M + + +GEG+VG+ A TG HQWI ++ E +
Sbjct: 58 DTQGNEKVQLLTNRMMLNNRIILVGEGLVGRAAFTGHHQWILANSF-NRDVHPPEVINEM 116
Query: 128 QSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVFAALNDISVGHVSSTIQ 187
QFSAGI+T+AV VVPHGVVQLGS + E++ V ++ + L + +S +
Sbjct: 117 LLQFSAGIQTVAVFPVVPHGVVQLGSSLPIMENLGFVNDVKGLILQLGCVPGALLSENYR 176
Query: 188 S--SVKNTLSLPDLPTKTIPNRWHNL 211
+ + + +P ++ IP++ H +
Sbjct: 177 TYEPAADFIGVP--VSRIIPSQGHKI 200
>sp|Q7XJU0|LHWL2_ARATH Transcription factor bHLH157 OS=Arabidopsis thaliana GN=BHLH157
PE=2 SV=1
Length = 527
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 128/183 (69%), Gaps = 12/183 (6%)
Query: 563 NKKRARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITKH 622
KKRA+ GE+ RPRP+DRQ+IQDRIKELR ++PNG+KCSID+LL+ TIKHM+F+QS+ K+
Sbjct: 350 KKKRAKAGESRRPRPKDRQMIQDRIKELRGMIPNGAKCSIDTLLDLTIKHMVFMQSLAKY 409
Query: 623 ADKLSKCAESKMHQKGNGIHGSNYEQGSSWAVEMGSHLKVCSIVVENLNKNGQMLVEMLC 682
A++L + ESK+ + E+ +WA+E+G VC I+VE LN+ G+M +EM+C
Sbjct: 410 AERLKQPYESKLVK----------EKERTWALEVGEEGVVCPIMVEELNREGEMQIEMVC 459
Query: 683 EECSHFLEIAEAIRSLGLTILKGVTEAHGDKTWICFVVEGQDNRIMHRMDVLWSLVQLLQ 742
EE FLEI + +R LGL ILKGV E + W F+V+ + + R+ VL+SLVQL Q
Sbjct: 460 EEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIVQAKPQ--VTRIQVLYSLVQLFQ 517
Query: 743 SKT 745
T
Sbjct: 518 HHT 520
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 44/162 (27%)
Query: 13 ILKSLCFNTAWKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCSSESLENFHGGRY 72
ILKSLC + W YAVFW+ M+L +E+ Y D Q +L
Sbjct: 8 ILKSLCLSHGWSYAVFWRYDPINSMILRFEEAYNDE--QSVAL----------------- 48
Query: 73 SHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDQLVTNSCSSFEFSDGWQSQFS 132
V M LG+GIVG+VA +G HQW+FSD L F++ +Q+QF
Sbjct: 49 --------VDDMVLQAPILGQGIVGEVASSGNHQWLFSDTL-------FQWEHEFQNQFL 93
Query: 133 AGIR----------TIAVVAVVPHGVVQLGSLDEVTEDMKVV 164
G + TIA++ + GVVQLGS ++ E +++
Sbjct: 94 CGFKILIRQFTYTQTIAIIPLGSSGVVQLGSTQKILESTEIL 135
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 37/183 (20%)
Query: 20 NTAWKYAVFWK--LKHRTRMVLTWEDG-----------------YYDNCGQQDSLENKCS 60
N +W YA+FW+ + + VL W DG ++N G ++
Sbjct: 63 NFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMR 122
Query: 61 SESLENFHG--GRYSHDPLGLAVAKMS----------YHVYSLGEGIVGQVAVTGKHQWI 108
L+ H G D L++ K++ Y ++ GEG G+ +GKH W+
Sbjct: 123 KRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHVWL 182
Query: 109 FSDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIR 168
SD + NS S + F SAGIRTI +V GV++LGS+ + E++ +V ++
Sbjct: 183 -SDAV--NSESDYCFRSFMAK--SAGIRTIVMVP-TDAGVLELGSVWSLPENIGLVKSVQ 236
Query: 169 DVF 171
+F
Sbjct: 237 ALF 239
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 561 KNNKKRARTGENGRPRP--------RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKH 612
K +KR R NGR P + R+ + R LR +VPN SK SLL I +
Sbjct: 377 KRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISY 436
Query: 613 MLFLQSITK 621
+ LQ K
Sbjct: 437 IKELQEKVK 445
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 73/251 (29%)
Query: 20 NTAWKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCSSESLENFHGGRYSHD---- 75
N W Y +FW + VL W DGYY+ G + + +SE + G R S
Sbjct: 24 NIQWSYGIFWSVSASQSGVLEWGDGYYN--GDIKTRKTIQASEIKADQLGLRRSEQLSEL 81
Query: 76 ------------------------------PLGLAVAKMSY-----HVYSLGEGIVGQVA 100
P LA + Y V+++GEG+ G+
Sbjct: 82 YESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMPGRTF 141
Query: 101 VTGKHQWIFSDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTED 160
G+ W+ + ++ S FS ++ SA ++T+ + GVV++G+ + +TED
Sbjct: 142 ANGEPIWLCN----AHTADSKVFSRSLLAK-SAAVKTVVCFPFL-GGVVEIGTTEHITED 195
Query: 161 MKVVTHIRDVFAALNDISVGHVSSTIQSSVKNTLSLPDLPTKTIPNRW-HNLDEVVNRG- 218
M V+ ++ F L PD +P R +++D V++
Sbjct: 196 MNVIQCVKTSF----------------------LEAPDPYATILPARSDYHIDNVLDPQQ 233
Query: 219 --GPDVQLPMF 227
G ++ PMF
Sbjct: 234 ILGDEIYAPMF 244
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 566 RARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITKHADK 625
R TG + + R+ + +R LR+++P+ +K S+L+ TI+ +LQ + + +
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIE---YLQELERRVQE 492
Query: 626 LSKCAES 632
L C ES
Sbjct: 493 LESCRES 499
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 39/230 (16%)
Query: 547 STCSEQLDRSSEPAKNNKKRART-GENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSL 605
S CS+Q+D +P K + +N R R+ + DR+ LR LVP +K S+
Sbjct: 289 SDCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASI 348
Query: 606 LERTIKHMLFLQSITKH-ADKLSKCAESKMHQKGNGIHGSNYEQGS---SWAVEMGSHLK 661
L I ++ LQ+ K D+L + +E++ GSN QG + V G H
Sbjct: 349 LGDAINYVKELQNEAKELQDELEENSETE--------DGSNRPQGGMSLNGTVVTGFHPG 400
Query: 662 V-CS---------IVVENLNKNGQ---------------MLVEMLCE-ECSHFLEIAEAI 695
+ C+ + +EN N GQ V+++CE + F + EA+
Sbjct: 401 LSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEAL 460
Query: 696 RSLGLTILKGVTEAHGDKTWICFVVEGQDNRIMHRMDVLWSLVQLLQSKT 745
SLGL + T + F VE DN ++ V SL+++ ++ +
Sbjct: 461 DSLGLEVTNANTTRYLSLVSNVFKVEKNDNEMVQAEHVRNSLLEITRNTS 510
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 9 DLHGILKSLCFNTAWKYAVFWKLKHRTRMVLTWEDGYYDNC-------------GQQDSL 55
+L G+LK+ + W Y+VFW+ + R VL W +GYY+ ++ +L
Sbjct: 19 ELQGLLKTAVQSVDWTYSVFWQFCPQQR-VLVWGNGYYNGAIKTRKTTQPAEVTAEEAAL 77
Query: 56 ENKCSSESL-ENFHGGRYSHD--------PLGLAVAKMSYHV-----YSLGEGIVGQVAV 101
E L E G + + P L + Y + + G+ G+
Sbjct: 78 ERSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYA 137
Query: 102 TGKHQWIFSDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDM 161
KH W+ N S FS ++ SA I+T+ + ++ GVV+LG+ +V ED+
Sbjct: 138 RRKHVWLSG----ANEVDSKTFSRAILAK-SAKIQTVVCIPMLD-GVVELGTTKKVREDV 191
Query: 162 KVVTHIRDVF 171
+ V + F
Sbjct: 192 EFVELTKSFF 201
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 556 SSEPAKNNKKRARTGENGRP-----RPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTI 610
+++P K RAR G+ P R R R+ I +R+K L+ELVPNG+K S+L+ I
Sbjct: 121 TAQPQTKPKVRARRGQATDPHSIAERLR-RERIAERMKSLQELVPNGNKTDKASMLDEII 179
Query: 611 KHMLFLQSITKHADKLSKC--AESKMHQKGNGIHGSNYEQGSSWAVEMGSHLKVCSIVVE 668
++ FLQ K +S+ A S Q GS+ SS +M H +V ++ E
Sbjct: 180 DYVKFLQLQVK-VLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEH-QVAKLMEE 237
Query: 669 NLNKNGQML 677
++ Q L
Sbjct: 238 DMGSAMQYL 246
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 23 WKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCS----------SESLENFH---- 68
W YA+FW + VLTW DG+Y+ + + N S+ L +
Sbjct: 37 WSYALFWSISDTQPGVLTWTDGFYNGEVKTRKISNSVELTSDQLVMQRSDQLRELYEALL 96
Query: 69 -------------GGRYSHDPLG----LAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSD 111
G S + LG V M+Y + G+G+ G+ + +H W+ +
Sbjct: 97 SGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTY-AFRPGQGLPGRSFASDEHVWLCNA 155
Query: 112 QLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVF 171
L S F ++ SA I++I + V+ GV++LG+ D V E +V+ F
Sbjct: 156 HL----AGSKAFPRALLAK-SASIQSILCIPVM-GGVLELGTTDTVPEAPDLVSRATAAF 209
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 38/180 (21%)
Query: 23 WKYAVFWKLKHRTRMVLTWEDGYYDNCGQQDSLENKCS----------SESLENFH---- 68
W YA+FW + VLTW DG+Y+ + + N S+ L +
Sbjct: 37 WSYALFWSISDTQPGVLTWTDGFYNGEVKTRKISNSVELTSDQLVMQRSDQLRELYEALL 96
Query: 69 -------------GGRYSHDPLG----LAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSD 111
G S + LG V M+Y + G+G+ G+ + +H W+ +
Sbjct: 97 SGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTY-AFRPGQGLPGRSFASDEHVWLCNA 155
Query: 112 QLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVF 171
L S F ++ SA I++I + V+ GV++LG+ D V E +V+ F
Sbjct: 156 HL----AGSKAFPRALLAK-SASIQSILCIPVM-GGVLELGTTDTVPEAPDLVSRATAAF 209
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 41/194 (21%)
Query: 10 LHGILKSLCFNT--AWKYAVFWKLKH--RTRMVLTWEDGYYDNCGQQDSLENKCSSESLE 65
L L++L T W YA+FW+ + VL W DGYY + + + SS
Sbjct: 68 LQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPPFS 127
Query: 66 NFHGGRY------------------SHDPLGLAVAKMSYHV-------YSLGEGIVGQVA 100
Y S D + V + ++ G G+ G+
Sbjct: 128 TPADQEYRKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFACGAGLAGKAF 187
Query: 101 VTGKHQWIF-SDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVP--HGVVQLGSLDEV 157
TG W+ SDQL + C + G+ + +A +P +GVV++GS + +
Sbjct: 188 ATGNAVWVSGSDQLSGSGCERAK---------QGGVFGMHTIACIPSANGVVEVGSTEPI 238
Query: 158 TEDMKVVTHIRDVF 171
+ ++ +R +F
Sbjct: 239 RQSSDLINKVRILF 252
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 561 KNNKKRARTGENGRPRP--------RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKH 612
K KKR R NGR P + R+ + R LR +VPN SK SLL I +
Sbjct: 434 KRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAY 493
Query: 613 MLFLQS--ITKHADKL---SKCAESKMHQKGNGIHGSNYEQGSS 651
+ L+S + ++KL ++ E K+ G S + SS
Sbjct: 494 INELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSS 537
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 556 SSEPAKNNKKRARTGENGRP-----RPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTI 610
++ P K RAR G+ P R R R+ I +R+K L+ELVPNG+K S+L+ I
Sbjct: 129 AAPPQSRTKIRARRGQATDPHSIAERLR-RERIAERMKALQELVPNGNKTDKASMLDEII 187
Query: 611 KHMLFLQ 617
++ FLQ
Sbjct: 188 DYVKFLQ 194
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 20/104 (19%)
Query: 534 GAVSSKGFSSTC-----PSTCSEQ----LDRSS---EPAK----NNKKRARTGENGRPRP 577
GA+ S+ SST S C++Q D SS +P+K N K RA G P+
Sbjct: 219 GAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQS 278
Query: 578 ----RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQ 617
+ R+ I +R++ L+ LVPNG+K I ++LE + ++ FLQ
Sbjct: 279 LYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQ 322
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 15/68 (22%)
Query: 565 KRARTGENGRPRPR---------------DRQLIQDRIKELRELVPNGSKCSIDSLLERT 609
K+ +G NG+ +P+ R+ I +R+K L+ELVPNG+K + ++LE+
Sbjct: 190 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 249
Query: 610 IKHMLFLQ 617
I ++ FLQ
Sbjct: 250 IGYVKFLQ 257
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 20 NTAWKYAVFWKLKHRTR--MVLTWEDGYYD--------------NCGQQDSLENKCSSES 63
N +W YA+FW++ +VL W DGY + G+++
Sbjct: 63 NFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRV 122
Query: 64 LENFH----GGRYSHDPLGLA--------VAKMSYHVYSLGEGIVGQVAVTGKHQWIFSD 111
L+ H G + LGL + Y + GEG G+ + K W+ SD
Sbjct: 123 LQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVWL-SD 181
Query: 112 QLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTHIRDVF 171
V NS S + SAGI+T+ +V GVV+LGS + E + IR +F
Sbjct: 182 --VVNSGSDYCVRSFLAK--SAGIQTVVLVP-TDLGVVELGSTSCLPESEDSILSIRSLF 236
Query: 172 AA 173
+
Sbjct: 237 TS 238
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 547 STCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLL 606
S S+ L R AK N+ A ++ R R R+ I DR+K L+ LVPNG+K I ++L
Sbjct: 122 SNTSKSLKRK---AKANRGIASDPQSLYARKR-RERINDRLKTLQSLVPNGTKVDISTML 177
Query: 607 ERTIKHMLFLQ 617
E + ++ FLQ
Sbjct: 178 EDAVHYVKFLQ 188
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 9 DLHGILKSLCFNTAWKYAVFW---KLKHRTRMVLTWEDGYY--------DNCGQQDSLEN 57
+L L+ + + W YA+FW + VL W DG+ ++ QQD ++
Sbjct: 49 NLQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDYSQQDEIKR 108
Query: 58 KCSSESLENFHGGRYSH-----------DPLGLAVAKMSYHVYSLGEGIVGQVAVTGKHQ 106
+ + +F G H D LA S+ + G G V+GK
Sbjct: 109 RVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAG-TYVSGKPL 167
Query: 107 WIFSDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVVTH 166
W SC S+ + ++ SAG +T+ V V GVV+LGSL + ED V+
Sbjct: 168 WAAD----LPSCLSYYRVRSFLAR-SAGFQTVLSVPV-NSGVVELGSLRHIPEDKSVIEM 221
Query: 167 IRDVFAA 173
++ VF
Sbjct: 222 VKSVFGG 228
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 562 NNKKRARTGENGRPRP----RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQ 617
N K RA G P+ + R+ I +R++ L+ LVPNG+K I ++LE ++++ FLQ
Sbjct: 234 NGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQ 293
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 525 HFLNSSEVCGAVSSKGFSSTCPSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQ 584
H S++ +SS T P + D S AKN ++R I
Sbjct: 175 HTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRER----------------IS 218
Query: 585 DRIKELRELVPNGSKCSIDSLLERTIKHMLFLQ 617
+R+K L+ELVPNG+K + ++LE+ I ++ FLQ
Sbjct: 219 ERLKILQELVPNGTKVDLVTMLEKAISYVKFLQ 251
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 554 DRSSEPAKNNKKRARTGENGRPRP----RDRQLIQDRIKELRELVPNGSKCSIDSLLERT 609
+++S + K RA G P+ + R+ I +R+K L+ LVPNG+K I ++LE
Sbjct: 156 EKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEA 215
Query: 610 IKHMLFLQ 617
+ ++ FLQ
Sbjct: 216 VHYVKFLQ 223
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 42/187 (22%)
Query: 20 NTAWKYAVFWKLKHRTRMVLTWEDGYY-----------------DNCGQQDSLENK---- 58
N W Y +FW + VL W DGYY D G + S + +
Sbjct: 23 NIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAAEVKIDQLGLERSEQLRELYE 82
Query: 59 ----------CSSESLENFHGGRYSHDPLG----LAVAKMSYHVYSLGEGIVGQVAVTGK 104
SS+ S + L + MS+ V+++GEGI G G+
Sbjct: 83 SLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSF-VFNIGEGIPGGALSNGE 141
Query: 105 HQWIFSDQLVTNSCSSFEFSDGWQSQFSAGIRTIAVVAVVPHGVVQLGSLDEVTEDMKVV 164
W+ + + + S F+ ++ SA ++T+ + GV+++G+ + + EDM V+
Sbjct: 142 PIWLCNAE----TADSKVFTRSLLAK-SASLQTVVCFPFL-GGVLEIGTTEHIKEDMNVI 195
Query: 165 THIRDVF 171
++ +F
Sbjct: 196 QSVKTLF 202
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 569 TGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITKHADKLSK 628
TG + + R+ + +R LR ++P+ SK S+L+ TI+ +LQ + K +L
Sbjct: 403 TGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIE---YLQDLQKRVQELES 459
Query: 629 CAES 632
C ES
Sbjct: 460 CRES 463
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 564 KKRARTGENGRP-----RPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQ- 617
+ RAR G+ P R R R+ I +R+K L+ELVPN +K S+L+ I+++ FLQ
Sbjct: 98 RVRARRGQATDPHSIAERLR-RERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQL 156
Query: 618 --------------SITKHADKLSKCAESKMH---QKGNGIHGSNYEQGSSWAVEMGSHL 660
S+ + LS A +++ NG++G+ GSS +
Sbjct: 157 QVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQ 216
Query: 661 KVCSIVVENLNKNGQML 677
+V ++ E++ Q L
Sbjct: 217 RVAKLMEEDMGSAMQYL 233
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 40.8 bits (94), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 558 EPAKNNKKRARTGENGRPRP--------RDRQLIQDRIKELRELVPNGSKCSIDSLLERT 609
EP K +KR R NGR P + R+ + R LR +VPN SK SLL
Sbjct: 395 EPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDA 454
Query: 610 IKHMLFLQSITKHAD 624
I ++ L+S + A+
Sbjct: 455 ISYISELKSKLQKAE 469
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 40.4 bits (93), Expect = 0.048, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 580 RQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQS-ITKHADKLSKCAESKMH 635
R I DR + LR LVP GSK S+LE+ I ++ FL++ +T H L + E H
Sbjct: 53 RHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEEGCQH 109
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 40.0 bits (92), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 559 PAKNNKKRARTGENGRPRP--------RDRQLIQDRIKELRELVPNGSKCSIDSLLERTI 610
P K +KR R NGR P + R+ + R LR +VPN SK SLL I
Sbjct: 395 PEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAI 454
Query: 611 KHMLFLQSITKHADKLSKCAESK---MHQKGNGIHG 643
++ L+S + A+ + + K M ++GN G
Sbjct: 455 SYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKG 490
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 9/44 (20%)
Query: 10 LHGILKSLCFNTAWKYAVFWKLKH-------RTRMVLTWEDGYY 46
L +++S N W YA+FW++ H ++L W DGYY
Sbjct: 56 LQALIESAGEN--WTYAIFWQISHDFDSSTGDNTVILGWGDGYY 97
>sp|O04407|NEED_PINRA Floricaula/leafy-like protein FL1 OS=Pinus radiata PE=1 SV=1
Length = 404
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 496 PESSSQSKNTNNSVSYSISQSSLVEEDAKHFLNSSEVCGAVSSKGFSSTCPSTCSEQLDR 555
PES+S N S S+L+ +++ N ++ CG+ G P SE +R
Sbjct: 174 PESTSADHAPMNIAS--CKDSTLILQNS----NQAQFCGS----GLIGV-PEHSSESDER 222
Query: 556 SSEPAKNNKKRAR-TGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHML 614
++ K ++R++ GE+G RPR+ I EL NG D L E+ K +L
Sbjct: 223 KADTNKQKRRRSKEPGEDGEDRPREHPFIVTEPGELARGKKNGLDYLFD-LYEQCGKFLL 281
Query: 615 FLQSITKHADKLSKC 629
+Q I K +K KC
Sbjct: 282 EVQRIAK--EKGEKC 294
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 475 DVKSERTFCRSMQSLLTTEKKPESSSQSKNTNNSVSYSISQSSLVEEDAKHFLNSSEVCG 534
DV R M++L ++ PE +SQ K +S SS+ + + ++ + S V
Sbjct: 127 DVSPGSKRSREMEALFSS---PEFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDS-VAF 182
Query: 535 AVSSKGFSSTCPSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQDRIKELRELV 594
V +K +T P + +E++ R+ I DRI++L+ELV
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTR-------------------------ISDRIRKLQELV 217
Query: 595 PNGSK-CSIDSLLERTIKHMLFLQ-SITKHADKLSKC 629
PN K + +LE ++++ LQ I + ++ +C
Sbjct: 218 PNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRC 254
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 563 NKKRARTGENGRPRP-----RDRQ-LIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFL 616
N KR+R+ P RDR+ I DR K L+ +VP G+K S+L+ I ++ FL
Sbjct: 33 NTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFL 92
Query: 617 QS 618
++
Sbjct: 93 KA 94
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 35.0 bits (79), Expect = 2.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 553 LDRSSEPAKNNKKRARTGENGRP--RPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTI 610
+D ++ P K N++ R ++ + R R+ I ++I+ L+ +VP G+K S+L+ I
Sbjct: 103 IDPATVP-KPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAI 161
Query: 611 KHMLFLQ 617
++ FL+
Sbjct: 162 RYTKFLK 168
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 18/227 (7%)
Query: 522 DAKHFLNSSEVCGAVSSKGFSSTCPSTCSEQLDRS----SEPAKNNKKRAR---TGENGR 574
D +H + + + S K + P S++ +R ++P N+ A+ E R
Sbjct: 101 DMEHEYSPTYLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKR 160
Query: 575 PRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQSITKHAD--KLSKCAES 632
R+ + R L LVP K S+L +KH+ +LQ + K + ES
Sbjct: 161 -----REKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLES 215
Query: 633 KMHQKGNGIHGSNYEQGSSWAVEMG-SHLKVCSIVVENLNKNGQMLVEMLCE-ECSHFLE 690
+ K + + + Q S + E G S L + I V +++ +L+++LCE + H +
Sbjct: 216 MVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDED--VLIKILCEKQKGHLAK 273
Query: 691 IAEAIRSLGLTILKGVTEAHGDKTWICFVVEGQDNRIMHRMDVLWSL 737
I I L + I G I + + + + M MDV+ SL
Sbjct: 274 IMAEIEKLHILITNSSVLNFGPTLDITIIAKKESDFDMTLMDVVKSL 320
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 564 KKRARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQS 618
+ RA N R R R I R+K L++LVPN SK S+L+ I+++ LQ+
Sbjct: 211 RSRAAAIHNQSERKR-RDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQA 264
>sp|P96663|YDEF_BACSU Uncharacterized HTH-type transcriptional regulator YdeF OS=Bacillus
subtilis (strain 168) GN=ydeF PE=3 SV=2
Length = 462
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 447 TSSSHLMFDSGSENLLDAVVASVCNSGSDVKSE-RTF--CRSMQSLLTTEKKPESSSQSK 503
TS H++F +G +N + A +AS+C G + + T+ +++ SLL+ + P S +
Sbjct: 165 TSVDHILFANGGQNAIAATLASLCKPGDRIGVDHHTYPGLKTVASLLSVQIVPIKSENDE 224
Query: 504 NTNNSVSYS 512
+ S+ Y+
Sbjct: 225 MSPESLEYA 233
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 494 KKPESSSQSKNTNN-SVSYSISQSSLVEEDAKHFLNSSEVCGAVSSKGFSSTCPSTCSEQ 552
KKP + + ++N S +S S VE DA+ E+ + + +
Sbjct: 209 KKPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMI-------YRAAAFRPVNFG 261
Query: 553 LDRSSEPAKNNKKRARTGENGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKH 612
L+ +P + N K + + R R R+ I ++I+ L+ LVP G+K S+L+ +
Sbjct: 262 LEIVEKPKRKNVKISTDPQTVAARQR-RERISEKIRVLQTLVPGGTKMDTASMLDEAANY 320
Query: 613 MLFLQSITKHADKL 626
+ FL++ K + L
Sbjct: 321 LKFLRAQVKALENL 334
>sp|A4IGY6|S39AE_XENTR Zinc transporter ZIP14 OS=Xenopus tropicalis GN=slc39a14 PE=2 SV=1
Length = 462
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 486 MQSLLTTEKKPESSSQSKNTNNSVSYSISQSSLVEEDAKHFLNSSEVCGAVSSKGFSSTC 545
+QSLL + + +N +S +S S+L A H L S V V ++GF S C
Sbjct: 50 LQSLLENLEVGKGGGNQRN----MSQCLSSSTLF---AAHNLTSGSV---VDAEGFQSFC 99
Query: 546 PSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRD 579
P+ + R+ + + + G GRP P +
Sbjct: 100 PTILQQLETRACQESPAFQNETTPGAEGRPSPGE 133
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 565 KRARTGE----NGRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQ 617
KR+R E + R R RDR I +R+K L+EL+P +K S+L+ I++M LQ
Sbjct: 281 KRSRAAEVHNLSERKR-RDR--INERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 334
>sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Mus
musculus GN=Hey2 PE=1 SV=1
Length = 339
Score = 33.9 bits (76), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 546 PSTCSEQLDRSSEPAKNNKKRARTGENGRPRPRDRQLIQDRIKELRELVPNG------SK 599
P + + RS+ P ++ AR G R R I + + ELR LVP +K
Sbjct: 27 PGHATSSVMRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGSAK 86
Query: 600 CSIDSLLERTIKHMLFLQS 618
+L+ T+ H+ LQ+
Sbjct: 87 LEKAEILQMTVDHLKMLQA 105
>sp|P12626|ANFA_AZOVI Nitrogen fixation protein AnfA OS=Azotobacter vinelandii GN=anfA
PE=4 SV=1
Length = 533
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 72 YSHDPLGLAVAKMSYHVYSLGEGIVGQVAVTGK 104
+ HD GL + +Y++GEGI G+V TGK
Sbjct: 80 FIHDSFGLTEEEKKRGIYAVGEGITGKVVETGK 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 278,612,278
Number of Sequences: 539616
Number of extensions: 11915949
Number of successful extensions: 25576
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 24453
Number of HSP's gapped (non-prelim): 624
length of query: 748
length of database: 191,569,459
effective HSP length: 125
effective length of query: 623
effective length of database: 124,117,459
effective search space: 77325176957
effective search space used: 77325176957
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)