Query 004509
Match_columns 748
No_of_seqs 259 out of 2840
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 18:11:36 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004509.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1816-1820//hhsearch_pdb/004509hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rim_A Transketolase, TK; TPP, 1.0 1 1 1110.1 62.0 659 86-748 20-698 (700)
2 3uk1_A Transketolase; structur 1.0 1 1 1092.4 55.9 649 88-748 45-710 (711)
3 3m49_A Transketolase; alpha-be 1.0 1 1 1086.2 64.2 657 87-748 28-690 (690)
4 3kom_A Transketolase; rossmann 1.0 1 1 1082.6 59.3 651 87-748 5-663 (663)
5 1itz_A Transketolase; calvin c 1.0 1 1 1050.9 69.1 672 75-747 2-675 (675)
6 1r9j_A Transketolase; domains, 1.0 1 1 1044.2 66.0 645 88-748 6-655 (673)
7 2r8o_A Transketolase 1, TK 1; 1.0 1 1 1040.1 59.4 653 88-748 4-663 (669)
8 3l84_A Transketolase; TKT, str 1.0 1 1 1033.5 63.9 625 85-746 3-631 (632)
9 1gpu_A Transketolase; transfer 1.0 1 1 1032.3 65.8 649 87-748 6-664 (680)
10 2e6k_A Transketolase; structur 1.0 1 1 1022.4 62.3 645 86-748 6-651 (651)
No 1
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=1.00 E-value=1 Score=1110.11 Aligned_cols=659 Identities=46% Similarity=0.779 Sum_probs=605.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 9999999-999999999996229988999999899999998530212899999999992997099841799999999199
Q 004509 86 ALVEKSV-NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGY 164 (748)
Q Consensus 86 ~~l~~~a-~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~ 164 (748)
+.|+++| ++||.++++|+.++++||+|++||++||+++||+++|++||+||+|++|||||||+||++|++|++++|+||
T Consensus 20 ~~l~~~a~~~iR~~~~~~v~~a~sGH~g~~ls~a~i~~~L~~~~l~~~p~~p~~~~rDrfvls~GH~s~~lYa~l~l~G~ 99 (700)
T 3rim_A 20 TEIDSAAVDTIRVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRTMRHDPSDTHWLGRDRFVLSAGHSSLTLYIQLYLGGF 99 (700)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHTHHHHHHHHHTTCCCCTTCTTCTTCCEEEESSTTCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99999999999999999999718997771479999999999987087977888899871887788565999999998588
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCEEEEEECCH
Q ss_conf 999988985356159999999999999961016663557699999999999875201189999---75896899998510
Q 004509 165 DSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDN---EIVDHYTYVILGDG 241 (748)
Q Consensus 165 ~~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~---~~~~~~v~~iiGDG 241 (748)
. ++.++|++|||++|.++|||++.++||+++++|++|||++.|+|+|+|.|+++++||+|++ +..+++|||++|||
T Consensus 100 ~-~~~~~l~~fr~~gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG 178 (700)
T 3rim_A 100 G-LELSDIESLRTWGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDG 178 (700)
T ss_dssp S-CCHHHHTTTTSTTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHH
T ss_pred C-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 9-999999876468999888999777887112566667853699999999998742126654334467898699998875
Q ss_pred HCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 00636599999999971999099999779975333666434011898882089479997069999999999999988549
Q 004509 242 CQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVT 321 (748)
Q Consensus 242 ~~~eG~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~DG~~D~~~l~~al~~a~~~~ 321 (748)
+++||++|||+++|++|+|+|||+|||||+++|++++.....+++.++|++|||++++|+||| |+++|++++++|++..
T Consensus 179 ~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~~~~~~~~~~a~G~~~~~V~DG~-D~~al~~Al~~A~~~~ 257 (700)
T 3rim_A 179 DIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIALCEDTAARYRAYGWHVQEVEGGE-NVVGIEEAIANAQAVT 257 (700)
T ss_dssp HHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHHTCEEEEEECTT-CHHHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEECCCC-CHHHHHHHHHHHHHCC
T ss_conf 200372899999999839996899998998334666311145509999998598089977999-9999999999999748
Q ss_pred CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9988999983304689988788554477676335999998329999-999885667998999885111139999999998
Q 004509 322 DKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPY-EPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAE 400 (748)
Q Consensus 322 ~~P~vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~-~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~ 400 (748)
++|++|+++|+||+|+++++++.+||+.++++++++.++++++|+. .+|.+|++++.+|+...++|...+++|++.+++
T Consensus 258 ~~P~lI~~~T~kG~G~~~~e~~~~~Hg~~~~~e~~~~~~~~l~~~~~~~f~v~~~v~~~~~~~~~~g~~~~~~w~~~~~~ 337 (700)
T 3rim_A 258 DRPSFIALRTVIGYPAPNLMDTGKAHGAALGDDEVAAVKKIVGFDPDKTFQVREDVLTHTRGLVARGKQAHERWQLEFDA 337 (700)
T ss_dssp SSCEEEEEECCTTTTCTTTTTSHHHHHSCCCHHHHHHHHHHHTCCTTCSSCCCHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99889999877422678667882313799998999999998099955676688799999999886315789999999999
Q ss_pred HHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 87209799999998861999975111289999999412499999999999997699879994578787442001123655
Q 004509 401 YEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQ 480 (748)
Q Consensus 401 ~~~~~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~ 480 (748)
|.+.+|+.++++++.+++++|..|...+|.|..+.+++++|++++++|.++++.+|+++++++|++.|+++.++++..|+
T Consensus 338 ~~~~~p~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~ 417 (700)
T 3rim_A 338 WARREPERKALLDRLLAQKLPDGWDADLPHWEPGSKALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFG 417 (700)
T ss_dssp HHHHCHHHHHHHHHHHTTCCCTTTTSSCCCCCTTSSCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEES
T ss_pred HHHHCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHC
T ss_conf 87538178999999854679820233000024566453999999999999984599989995776677786554552111
Q ss_pred CCCC------C----CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 4599------9----97111563057899999999943999721998602479878888998400488759999428975
Q 004509 481 KDTP------E----ERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIG 550 (748)
Q Consensus 481 ~~~~------p----~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~ 550 (748)
+ +| | +|+||+||+||+|+++|+|||++|+ ++||+++|++|++|+++|||+.|++++||+++++|+|++
T Consensus 418 ~-~~~~~~~~p~~~~~R~id~GIaE~~mv~~A~GlA~~gG-~~Pv~~tF~~F~d~~~~~ir~~al~~lpvv~v~thdg~g 495 (700)
T 3rim_A 418 P-PSISTKEYTAHWYGRTLHFGVREHAMGAILSGIVLHGP-TRAYGGTFLQFSDYMRPAVRLAALMDIDTIYVWTHDSIG 495 (700)
T ss_dssp C-GGGCCSSCCEETTCCEEECCSCHHHHHHHHHHHHHHSS-CEEEEEEEGGGGGGGHHHHHHHHHHTCCCEEEEECCSGG
T ss_pred C-CCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCC-CEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 0-00234468766678656658028999999999987699-879997128899999999987607798989999688736
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 5899999999114578812899199900898999999999987499--94999976788788778876664566068814
Q 004509 551 LGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRK--RPSILALSRQKLPHLAGTSIDGVEKGAYIISD 628 (748)
Q Consensus 551 ~g~dG~tHq~ied~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~--~P~~irl~r~~~~~~~~~~~~~~~~G~~~i~~ 628 (748)
+|+||+|||++||+++||+|||++|++|+|++|++++|++|++..+ +|++||++|+++|.++.++.+.+++|+|++++
T Consensus 496 vG~dG~THq~ied~a~lr~iPnl~V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~~~~~~~~~~~~~~~G~~vlr~ 575 (700)
T 3rim_A 496 LGEDGPTHQPIEHLSALRAIPRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQGVPVLDGTDAEGVARGGYVLSD 575 (700)
T ss_dssp GCTTCTTTSCSSHHHHHHTSTTCEEECCSSHHHHHHHHHHHHTTTTCSSCEEEECCSSEECCCTTCCHHHHHHSCEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 68998764776699999528998899379999999999999971699987899925666777676520016788389950
Q ss_pred CCC---CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 899---99997999982855999999999998489948999659835589998897663125787338998144335730
Q 004509 629 NSS---GNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWE 705 (748)
Q Consensus 629 ~~~---~~g~dvtiva~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~ 705 (748)
... ++.+||+||++|+||++|++||+.|+++||+++|||++|++|||.+..+|++++++.....+|++|++...||.
T Consensus 576 g~~~~~~~~~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~~ 655 (700)
T 3rim_A 576 AGGLQPGEEPDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWH 655 (700)
T ss_dssp CSCCCTTCCCSEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGGH
T ss_pred CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHH
T ss_conf 77656578888899996668999999999998559975899806566567424999998725064389999689732399
Q ss_pred HHHCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 1205785078537578789988999994999989999999839
Q 004509 706 KIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 706 ~~v~~~~~~ig~d~fg~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
++++.....+|+|+|+.||+.++|++++|||+++|++++++++
T Consensus 656 ~~~~~~~~~igid~Fg~sg~~~~l~~~~Glt~e~I~~~i~~~l 698 (700)
T 3rim_A 656 QLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAERAL 698 (700)
T ss_dssp HHHCTTCEEECCCSCCCSSCHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 9984379687247376727999999996969999999999986
No 2
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=1.00 E-value=1 Score=1092.36 Aligned_cols=649 Identities=53% Similarity=0.851 Sum_probs=601.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 99999999999999996229988999999899999998530212899999999992997099841799999999199999
Q 004509 88 VEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV 167 (748)
Q Consensus 88 l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~~~ 167 (748)
..+++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|++|++++|+||. +
T Consensus 45 ~~~~a~~iR~~~i~~v~~a~~GH~g~~l~~aei~~~L~~~~~~~~~~~p~~~~rDrfvls~GH~s~~lYa~l~l~G~~-~ 123 (711)
T 3uk1_A 45 TTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYD-L 123 (711)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCCHHHHHTHHHHHHHHHHTCCCCTTCTTCTTCCEEEECSGGGHHHHHHHHHHHTCS-C
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC-C
T ss_conf 899999999999999986089765711789999999985247508888888999969980875248999999994889-8
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCHHH
Q ss_conf 98898535615999999999999996101666355769999999999987520118999975896899998510006365
Q 004509 168 QEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGI 247 (748)
Q Consensus 168 ~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~eG~ 247 (748)
+.++|++|||++|.++|||++..+||+++++|++|+|++.|+|+|+|.++++.+||+|++++.+++|||++|||+++||+
T Consensus 124 ~~~~l~~~r~~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~ 203 (711)
T 3uk1_A 124 PIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGI 203 (711)
T ss_dssp CHHHHHTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHH
T ss_pred CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHCC
T ss_conf 88999864244689989999999998024761455579999999999886411135665566898699998875010035
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 99999999971999099999779975333666434011898882089479997069999999999999988549998899
Q 004509 248 ANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLI 327 (748)
Q Consensus 248 ~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~DG~~D~~~l~~al~~a~~~~~~P~vI 327 (748)
+|||+++|++++|+|+|+|+|||+++|+++++....+++.++|++|||++++++||| |+++|.+++++|++ .++|++|
T Consensus 204 ~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~vdG~-d~~~l~~Al~~A~~-~~~P~lI 281 (711)
T 3uk1_A 204 SHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGH-DVDAIDAAIAKAKR-SDKPSLI 281 (711)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHTTCEEEEEEETT-CHHHHHHHHHHHTT-CSSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHCCCCEEEEECCC-CHHHHHHHHHHHHH-CCCCEEE
T ss_conf 899999999819893899998997012002533138789999997699489975799-98999999999986-7998899
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 99833046899887885544776763359999983299999998856679989998851111399999999988720979
Q 004509 328 RVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPE 407 (748)
Q Consensus 328 ~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~~~p~ 407 (748)
+++|+||+|+++++++.+||+.++++++++.++++++|+.+||.+++++++.|+.. ++|...+++|++.+.+|.+.+|+
T Consensus 282 ~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~pF~~~~~~~~~~~~~-~~g~~~~~~w~~~~~~~~~~~p~ 360 (711)
T 3uk1_A 282 CCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAK-EAGKRSEDDWNAAFAQYRAKYPA 360 (711)
T ss_dssp EEEC--------------------CHHHHHHHHHHHTCCCCTTCCCHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHCHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHCHH
T ss_conf 98053564778878840104899999999999998089878856874789999887-51544579999999988752826
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999988619999751112899999----99412499999999999997699879994578787442001123655459
Q 004509 408 EAAEFKSISSGQLPAGWEKALPTYTP----ESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDT 483 (748)
Q Consensus 408 ~~~~~~~~l~~~~p~~~~~~~p~~~~----~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~ 483 (748)
.+.++++.+.++.|+.|...++.+.. .+++++||++++++|.++++.+|+++++++|+++|+++.+++...|++ +
T Consensus 361 ~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~-~ 439 (711)
T 3uk1_A 361 EAAEFERRMAGTLPADWAAKAAAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRA-N 439 (711)
T ss_dssp HHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEE-C
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHH-H
T ss_conf 678988764157881177775676665421465415999999999999965998799823346767865222353433-2
Q ss_pred ---CC---CCCCCCCCCHHHHHHHHHHHHHC-CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf ---99---97111563057899999999943-999721998602479878888998400488759999428975589999
Q 004509 484 ---PE---ERNVRFGVREHGMGAICNGIALH-SPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGP 556 (748)
Q Consensus 484 ---~p---~R~i~~GIaE~~~vg~AaGlA~~-G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~ 556 (748)
|| +|+||+||+||+|+++|+|||++ | ++||+++|++|++|+++|||++|++++||+++++|+|+++|+||+
T Consensus 440 ~~~~p~~~~R~~d~GIaE~~mv~~AaGlA~~~G--~~Pv~~~f~~F~~~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~ 517 (711)
T 3uk1_A 440 ADGPGVQWGNHINYGVREFGMSAAINGLVLHGG--YKPFGGTFLTFSDYSRNALRVAALMKVPSIFVFTHDSIGLGEDGP 517 (711)
T ss_dssp SSSSSEECCSEEECCSCHHHHHHHHHHHHHHSS--CEEEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCSGGGCTTCT
T ss_pred HCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCC--CEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
T ss_conf 103899778687738338999999999998299--989999728899999999999612499989999788757689987
Q ss_pred CCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC--CCCCCCCEEEEECCCCCCC
Q ss_conf 99991145788128991999008989999999999874999499997678878877887--6664566068814899999
Q 004509 557 THQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTS--IDGVEKGAYIISDNSSGNK 634 (748)
Q Consensus 557 tHq~ied~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~--~~~~~~G~~~i~~~~~~~g 634 (748)
|||+++|+++||+|||++|++|+|++|++++|++|++ .++|++||++|+++|.++.++ .+.+++|+|++++.. |
T Consensus 518 THq~~ed~a~lr~iPnl~V~~Pad~~E~~~~l~~Ai~-~~~Pv~ir~~r~~~p~~~~~~~~~~~i~~G~~vl~~~~---G 593 (711)
T 3uk1_A 518 THQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVA-HQHPSCLIFSRQNLAFNARTDAQLANVEKGGYVLRDWD---E 593 (711)
T ss_dssp TTCCSSHHHHHHTSTTCEEECCSSHHHHHHHHHHHHH-SSSCEEEECCSSEECCCCCCHHHHHHGGGSSEEEECCC---S
T ss_pred CCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECC---C
T ss_conf 6477658999825999889943999999999999875-69988999627878877876432112578719999468---9
Q ss_pred ----CCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCC
Q ss_conf ----9799998285599999999999848994899965983558999889766312578733899814433573012057
Q 004509 635 ----PDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGS 710 (748)
Q Consensus 635 ----~dvtiva~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~ 710 (748)
+||+||++|+||++|++||+.|+++||+++|||++|++|||+++.+|+++|++++.+ +|++|++...||.++++.
T Consensus 594 ~~~~~dvtiia~G~~v~~al~Aa~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~-~V~vE~~~~~g~~~~~g~ 672 (711)
T 3uk1_A 594 EIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVR-RVAIEAGVTDFWRKYVGL 672 (711)
T ss_dssp SCCSEEEEEEECTTHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSC-EEEECSSCSGGGHHHHTT
T ss_pred CCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCE-EEEEECCCCCCHHHHHCC
T ss_conf 8788988999966799999999999997498758995585875451279999986163873-899937853437887189
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 85078537578789988999994999989999999839
Q 004509 711 KGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 711 ~~~~ig~d~fg~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+..++|+|+|+.||+.++|++++|||+++|++++++++
T Consensus 673 ~~~~iGid~Fg~sg~~~~L~~~~Glt~e~Iv~~~~~~l 710 (711)
T 3uk1_A 673 EGGVVGIDTFGESAPAGVLFKHFGFTVEHVIETAKAVL 710 (711)
T ss_dssp TSEEECCCSCCCSSCHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 96499828873758899999997959999999999975
No 3
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=1.00 E-value=1 Score=1086.18 Aligned_cols=657 Identities=54% Similarity=0.915 Sum_probs=604.8
Q ss_pred HHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 999999-9999999999962299889999998999999985302128999999999929970998417999999991999
Q 004509 87 LVEKSV-NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYD 165 (748)
Q Consensus 87 ~l~~~a-~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~ 165 (748)
.|++++ ++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|++|++++|+||.
T Consensus 28 ~l~~~a~~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~~l~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~ 107 (690)
T 3m49_A 28 SIEQLSINTIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTQFMKHNPNNPTWFNRDRFVLSAGHGSMLLYSLLHLSGYD 107 (690)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999999999986089888855589999999999872679778888898818977766789999999997889
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCH
Q ss_conf 99988985356159999999999999961016663557699999999999875201189999758968999985100063
Q 004509 166 SVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQME 245 (748)
Q Consensus 166 ~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~e 245 (748)
++.++|++|||++|.++|||++.++||+++++|++|+|++.|+|+|+|.++++.+||++++++.+++|||++|||+++|
T Consensus 108 -~~~~~l~~~rq~gs~~~Ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~e 186 (690)
T 3m49_A 108 -VTMDDLKNFRQWGSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLME 186 (690)
T ss_dssp -CCHHHHTTTTCTTCSSCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHS
T ss_pred -CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHH
T ss_conf -9999998525689998999998988763317853013577899999999875022355655667986999988534534
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 65999999999719990999997799753336664340118988820894799970699999999999999885499988
Q 004509 246 GIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPT 325 (748)
Q Consensus 246 G~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~DG~~D~~~l~~al~~a~~~~~~P~ 325 (748)
|++|||+++|++++|+|+|+|+|||+|+|++++.....+++.++|++|||++++|+||| |+++|.++++++++..++|+
T Consensus 187 G~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~v~DG~-d~~~l~~Al~~a~~~~~~P~ 265 (690)
T 3m49_A 187 GVSAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSFSESVEDRYKAYGWQVIRVEDGN-DIEAIAKAIEEAKADEKRPT 265 (690)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBGGGTCCCCHHHHHHHHTCEEEEESCTT-CHHHHHHHHHHHHHCCSSCE
T ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCEECCCCHHHCCCHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHHHHHCCCCCE
T ss_conf 31999999999839990899998997110133311255509999997698089984079-88999999999986279998
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999833046899887885544776763359999983299999-99885667998999-885111139999999998872
Q 004509 326 LIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYE-PFHVPEDVKKHWSR-HVAEGATLEAEWNAKFAEYEK 403 (748)
Q Consensus 326 vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~-p~~v~~e~~~~~~~-~~~~g~~~~~~w~~~~~~~~~ 403 (748)
+|+++|+||+|+++++++.+||+.++++++++..+++++|+.+ ||.++++++++|+. ..+++...+++|++.|.+|..
T Consensus 266 lI~v~T~kG~G~~~~~~~~~~Hg~~~~~e~~~~~~~~l~~~~~~~F~v~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 345 (690)
T 3m49_A 266 LIEVRTTIGFGSPNKSGKSASHGSPLGVEETKLTKEAYAWTAEQDFHVAEEVYENFRKTVQDVGETAQAEWNTMLGEYAQ 345 (690)
T ss_dssp EEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHHHTTCCCCSTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99977423546586668512268999989999999982899877776785689999988765030326889999999987
Q ss_pred HCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 09799999998861999975111289999999412499999999999997699879994578787442001123655459
Q 004509 404 KYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDT 483 (748)
Q Consensus 404 ~~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~ 483 (748)
++|+.++++++.+.+++|..|...+|.|..+ ++++||++++.+|.++++.+|+++++++|++.|+++.++....|+++.
T Consensus 346 ~~~~~a~~~~~~~~~~lp~~~~~~~~~~~~~-~~~a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~ 424 (690)
T 3m49_A 346 AYPELANELQAAMNGLLPEGWEQNLPTYELG-SKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDD 424 (690)
T ss_dssp HSHHHHHHHHHHHTTCCCTTGGGGCCCCCTT-CEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTB
T ss_pred HCHHHHHHHHHHHCCCCCHHHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHC
T ss_conf 6899999999986556843455633022444-431799999999999996689899996855566785234551200005
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf 99971115630578999999999439997219986024798788889984004887599994289755899999999114
Q 004509 484 PEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEH 563 (748)
Q Consensus 484 ~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~ied 563 (748)
+|+|+||+||+||+|+++|+|||++|+ ++||++||++|.+++..|||++|++++||+++++|+|+++|+||+|||++||
T Consensus 425 ~~~R~~d~GIaE~~mv~~A~GlA~~gG-~~P~~~tf~~Fs~f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq~ied 503 (690)
T 3m49_A 425 YSGKNIWYGVREFAMGAAMNGIALHGG-LKTYGGTFFVFSDYLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQ 503 (690)
T ss_dssp TTCCEEECCSCHHHHHHHHHHHHHHSS-CEEEEEEEGGGGGGGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCCSSH
T ss_pred CCCCEEECCCHHHHHHHHHHHHHHCCC-CEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHH
T ss_conf 997668718139999999999997699-8799984187999999999998743898199997998577899876377879
Q ss_pred HHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC---CCCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf 5788128991999008989999999999874999499997678878877887---6664566068814899999979999
Q 004509 564 LASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTS---IDGVEKGAYIISDNSSGNKPDVILI 640 (748)
Q Consensus 564 ~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~---~~~~~~G~~~i~~~~~~~g~dvtiv 640 (748)
+++||+|||++|++|+|++|++++|++|++..++|++||++|+.+|.++.++ .+.+++|+|++++.. ++++|++||
T Consensus 504 ~a~lr~iPnl~V~~Pad~~E~~~~l~~Ai~~~~~Pv~ir~~R~~~p~~~~~~~~~~~~~~~G~~vlr~g~-~g~~dvtii 582 (690)
T 3m49_A 504 LAALRAMPNVSVIRPADGNESVAAWRLALESTNKPTALVLTRQDLPTLEGAKDDTYEKVAKGAYVVSASK-KETADVILL 582 (690)
T ss_dssp HHHHHTSTTCEEECCSSHHHHHHHHHHHHHCSSSCEEEECCSSEEECCHHHHTTHHHHHHTSCEEEECCS-SSSCSEEEE
T ss_pred HHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCEEEE
T ss_conf 9998268997899509999999999999970899889993145678777654210004678708997267-889888999
Q ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCC
Q ss_conf 82855999999999998489948999659835589998897663125787338998144335730120578507853757
Q 004509 641 GTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRF 720 (748)
Q Consensus 641 a~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~f 720 (748)
++|+||++|++||+.|+++||+++|||++|++|||.+..+|++++++.....+|++|++...||.++++.....+|+|+|
T Consensus 583 a~G~~v~~Al~Aa~~L~~~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G~~~~~~~~~~~igid~F 662 (690)
T 3m49_A 583 ATGSEVSLAVEAQKALAVDGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFGWHRYVGLEGDVLGIDTF 662 (690)
T ss_dssp ECTTHHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTTTHHHHTTTCEEECCCSC
T ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEECCCCC
T ss_conf 95568999999999999649975999626577676416999999743168869999798355499996157978734757
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 8789988999994999989999999839
Q 004509 721 GASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 721 g~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+.||+.++|++++|||+++|++++++++
T Consensus 663 g~sg~~~~l~~~~Glt~e~I~~~i~~~l 690 (690)
T 3m49_A 663 GASAPGEKIMEEYGFTVENVVRKVKEML 690 (690)
T ss_dssp CCSSCHHHHHHHTTCSHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 5737999999997949999999999759
No 4
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=1.00 E-value=1 Score=1082.59 Aligned_cols=651 Identities=48% Similarity=0.802 Sum_probs=599.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf 99999999999999999622998899999989999999853021289999999999299709984179999999919999
Q 004509 87 LVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDS 166 (748)
Q Consensus 87 ~l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~~ 166 (748)
++++++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|++|++++++||.
T Consensus 5 ~~~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDrfvls~GH~s~~lYa~l~l~G~~- 83 (663)
T 3kom_A 5 IPREFSNAIRFLSIDATLKAKSGHPGMPMGMADIATVLWTKFLKHNPNNPHWINRDRFVLSNGHGSMLLYSLLHLTGYD- 83 (663)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTSCEEEECSSSCHHHHHHHHHHHTCS-
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC-
T ss_conf 8999999999999999986089877836789999999986056618788999999869980874108999999996779-
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCHH
Q ss_conf 99889853561599999999999999610166635576999999999998752011899997589689999851000636
Q 004509 167 VQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEG 246 (748)
Q Consensus 167 ~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~eG 246 (748)
++.++|++|||++|.++|||++..+||+++++|++|+|+|.|+|+|+|.++++.+||+|++++.+++|||++|||+++||
T Consensus 84 ~~~~~l~~~r~~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG 163 (663)
T 3kom_A 84 LSIEDIKNFRQLHSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEG 163 (663)
T ss_dssp CCHHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHC
T ss_conf 88889986356788899999988898805477246657999999999677644433555545689869999886033144
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 5999999999719990999997799753336664340118988820894799-970699999999999999885499988
Q 004509 247 IANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNGNTGYDDIRAAIKEAKAVTDKPT 325 (748)
Q Consensus 247 ~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG~~D~~~l~~al~~a~~~~~~P~ 325 (748)
++|||+++|++++|+|+|+|+|||+|+|+++++....+++.++|++|||+++ .| ||| |++++.+++++|++..++|+
T Consensus 164 ~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~-d~~~l~~al~~A~~~~~~P~ 241 (663)
T 3kom_A 164 VSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWFSDNTPERFRAYGWHVIENV-DGH-DFVAIEKAINEAHSQQQKPT 241 (663)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTCCCCHHHHHHHTTCEEEEEE-ETT-CHHHHHHHHHHHHHCSSSCE
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEE-CCC-CHHHHHHHHHHHHHCCCCCE
T ss_conf 1999999999829891999998997155332554426429999997798499997-489-99999999999986699988
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99998330468998878855447767633599999832999999988566799899988511113999999999887209
Q 004509 326 LIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKY 405 (748)
Q Consensus 326 vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~~~ 405 (748)
+|+++|+||+|+++++++.+||+.+++++++++++++++|+.+||.+++++++.|+.. ++|...+++|++.+.+|.+.
T Consensus 242 lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~pf~~~~~~~~~~~~~-~~g~~~~~~w~~~~~~~~~~- 319 (663)
T 3kom_A 242 LICCKTVIGFGSPEKAGTASVHGSPLSDQERASAAKELNWDYQAFEIPQDVYKYWDAR-EKGQALEANWQGQRNLFKDS- 319 (663)
T ss_dssp EEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHHHHHHTTCCCCTTCCCHHHHHHHCCH-HHHHHHHHHHHHHHHHHTTS-
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HHCCHHHHHHHHHHHHHHCC-
T ss_conf 9998110240568777873314799999999999998099888866773688999877-51432468899999874316-
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 799999998861999975111289999----9994124999999999999976998799945787874420011236554
Q 004509 406 PEEAAEFKSISSGQLPAGWEKALPTYT----PESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQK 481 (748)
Q Consensus 406 p~~~~~~~~~l~~~~p~~~~~~~p~~~----~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~ 481 (748)
| .+.++++.+.++.|+.|...+|.+. ..+++++||++++++|.++++.+|+++++++|+++|+++.++....|++
T Consensus 320 p-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~ 398 (663)
T 3kom_A 320 P-KFDEFERVLSKELPVGLESAINDYIASQLSNPVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNN 398 (663)
T ss_dssp T-THHHHHHHHHTCCCTTHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTT
T ss_pred H-HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 5-779999985267982066664566555421575526999999999999965998799941337777854433455540
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCH
Q ss_conf 59999711156305789999999994399972199860247987888899840048875999942897558999999991
Q 004509 482 DTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPI 561 (748)
Q Consensus 482 ~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~i 561 (748)
++||+|+||+||+||+|+++|+|||++|+ ++||+++|++|++|+++|||+.|++++||+++++|+|+++|+||+|||++
T Consensus 399 ~~~p~R~~d~GIaE~~~v~~a~GlA~~gG-~~P~~~tf~~F~~~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~~ 477 (663)
T 3kom_A 399 TQEGANYLSYGVREFGMAAIMNGLSLYGG-IKPYGGTFLVFSDYSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQPI 477 (663)
T ss_dssp CSTTCCEEECCSCHHHHHHHHHHHHHHSS-CEEEEEEEGGGHHHHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCS
T ss_pred CCCCCCEEECCCCHHHHHHHHHHHHHCCC-CEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCH
T ss_conf 03897767537119999999999997599-98999861989999999999987638977999968844557998886777
Q ss_pred HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC--CCCCCCCEEEEECCCCCCCCCEEE
Q ss_conf 145788128991999008989999999999874999499997678878877887--666456606881489999997999
Q 004509 562 EHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTS--IDGVEKGAYIISDNSSGNKPDVIL 639 (748)
Q Consensus 562 ed~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~--~~~~~~G~~~i~~~~~~~g~dvti 639 (748)
+|+++||++||++|++|+|++|++++|++|++..++|++||++|+++|.++..+ ...+++|+|++++.+ |+|++|
T Consensus 478 ed~a~lr~iPnl~V~~Pad~~e~~~~l~~A~~~~~~Pv~ir~~r~~~p~~~~~~~~~~~~~~G~~vl~~~~---g~dvti 554 (663)
T 3kom_A 478 EHVPSLRLIPNLSVWRPADTIETMIAWKEAVKSKDTPSVMVLTRQNLMPVVQTQHQVANIARGGYLVKDNP---DAKLTI 554 (663)
T ss_dssp SHHHHHHTSTTCEEECCCSHHHHHHHHHHHHHCSSCCEEEECCSSEECCCCCCHHHHHHHTTTCEEEECCT---TCSCEE
T ss_pred HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCCCCEEEEEECC---CCCEEE
T ss_conf 79999965899489960999999999999998689989998057667876765210110567649998659---998899
Q ss_pred EEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHC-CCCCEEEEC
Q ss_conf 9828559999999999984899489996598355899988976631257873389981443357301205-785078537
Q 004509 640 IGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVG-SKGKAIGID 718 (748)
Q Consensus 640 va~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~-~~~~~ig~d 718 (748)
|++|+||++|++|++.|+++||+++|||++|++|||.++.+|+++|++++.+ +|++|++...||.++++ .....+|+|
T Consensus 555 ia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~-~v~vE~~~~~g~~~~~gG~~~~~igid 633 (663)
T 3kom_A 555 VATGSEVELAVKVANEFEKKGIKLNVASIPCVEVFATQAHEYKKTVIKDDIP-AVFVEMAQPDMWYKYMPKAGGEVKGIY 633 (663)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCCCEEEECSCHHHHHTSCHHHHHHHSCTTSC-EEEECSSCCGGGGGGCCTTCEEEECCC
T ss_pred EEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCE-EEEEECCCCCCHHHHHCCCCCCEEEEC
T ss_conf 9956799999999999996499758997374776321179999986488874-999946986437887366687178706
Q ss_pred CCCCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 578789988999994999989999999839
Q 004509 719 RFGASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 719 ~fg~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+||.||+.++|++++|||+++|++++++++
T Consensus 634 ~Fg~sg~~~~l~~~~Glt~e~I~~~~~~~~ 663 (663)
T 3kom_A 634 SFGESAPAEDLFKRFGFTVENISNIVAKYV 663 (663)
T ss_dssp SCCCSSCHHHHHHHHTCSHHHHHHHHTTTC
T ss_pred CCCCCCCHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 885879999999997939999999999659
No 5
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=1.00 E-value=1 Score=1050.91 Aligned_cols=672 Identities=86% Similarity=1.365 Sum_probs=607.7
Q ss_pred HHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCH
Q ss_conf 4200125-898899999999999999999962299889999998999999985302128999999999929970998417
Q 004509 75 AVETLET-STDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCM 153 (748)
Q Consensus 75 ~~~~~~~-~~~~~~l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~ 153 (748)
+++|+.+ .-+.+.|++++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|
T Consensus 2 ~~~~~~~~~l~~~~l~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~ 81 (675)
T 1itz_A 2 AVETLQGKAATGELLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCM 81 (675)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHH
T ss_pred CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 63100157799999999999999999999987299866743769999999999986679678898899869980863689
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf 99999999199999988985356159999999999999961016663557699999999999875201189999758968
Q 004509 154 LQYALLHLAGYDSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHY 233 (748)
Q Consensus 154 ~lya~l~l~G~~~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~ 233 (748)
++|++++++|+..++.++|.+|||++|.++|||++.++|++++++|++|+|++.|+|+|+|.++++++||++++++.+++
T Consensus 82 ~lYa~l~l~G~~~~~~~~l~~~r~~~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~ 161 (675)
T 1itz_A 82 LQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHY 161 (675)
T ss_dssp HHHHHHHHHTCTTCCHHHHTTTTSTTCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCC
T ss_pred HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf 99999997499889999998535689999989999999996689723776899999999986664232355666778987
Q ss_pred EEEEECCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCCCCCHHHHHH
Q ss_conf 99998510006365999999999719990999997799753336664340118988820894799-97069999999999
Q 004509 234 TYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNGNTGYDDIRA 312 (748)
Q Consensus 234 v~~iiGDG~~~eG~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG~~D~~~l~~ 312 (748)
|||++|||+++||++|||+++|++++|+|+|+|+|||+|+|++++.....+++.++|++|||+++ .| |||+|++++.+
T Consensus 162 v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~~d~~~l~~ 240 (675)
T 1itz_A 162 TYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSTRFEALGWHTIWVK-NGNTGYDDIRA 240 (675)
T ss_dssp EEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCSCHHHHHHHTTCEEEEES-CTTTCHHHHHH
T ss_pred EEEEECHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEE-CCCCCHHHHHH
T ss_conf 99998876756468999999999809992899997899407777312028639999985798799993-39999999999
Q ss_pred HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998854999889999833046899887885544776763359999983299999998856679989998851111399
Q 004509 313 AIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEA 392 (748)
Q Consensus 313 al~~a~~~~~~P~vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~p~~v~~e~~~~~~~~~~~g~~~~~ 392 (748)
++++|++..++|++|+++|+||+|+++++++.+||+.+++.++++.++++++|+.+||.++++++..|+..++++...+.
T Consensus 241 al~~a~~~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~g~~~~~ 320 (675)
T 1itz_A 241 AIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQNLGWPYDTFFVPEDVKSHWSRHTPEGAALEA 320 (675)
T ss_dssp HHHHHHHCCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHHHHTCCCCTTCCCHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999877997099999335266766024753235898988999999998099845556875689999988753156689
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
Q ss_conf 99999998872097999999988619999751112899999994124999999999999976998799945787874420
Q 004509 393 EWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTL 472 (748)
Q Consensus 393 ~w~~~~~~~~~~~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~ 472 (748)
+|++.+.++...+|+.+.++++.+.++.|..|...+|.|...++.+++|++++++|.++++.+|+++++++|++.|+++.
T Consensus 321 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~ 400 (675)
T 1itz_A 321 DWNAKFAEYEKKYADDAATLKSIITGELPTGWVDALPKYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTL 400 (675)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHCCCCTTGGGGSCCCCTTSCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999987543181789999998546677204454022225785458999999999999974998799846556543432
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 01123655459999711156305789999999994399972199860247987888899840048875999942897558
Q 004509 473 LKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLG 552 (748)
Q Consensus 473 ~~~~~~f~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g 552 (748)
++++..|++++||+|+||+||+||+|+++|+|||++|.+++||+++|++|++|+++|||+.|++++||+++++|+|+++|
T Consensus 401 ~~g~~~f~~~~~~~R~id~gIaE~~~v~~a~GlA~~G~~~~P~~~t~~~F~~~~~~~ir~~a~~~lpvv~~~t~~g~g~G 480 (675)
T 1itz_A 401 LKMFGDFQKDTAEERNVRFGVREHGMGAICNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLG 480 (675)
T ss_dssp CTTCCBCCTTCTTCCBCCCCSCHHHHHHHHHHHHTTCTTCEEEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCSGGGC
T ss_pred CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 23453556568998757404059999999999994398978999877989999999999987569898999979853658
Q ss_pred CCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 99999999114578812899199900898999999999987499949999767887887788766645660688148999
Q 004509 553 EDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSG 632 (748)
Q Consensus 553 ~dG~tHq~ied~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~~~~~~~G~~~i~~~~~~ 632 (748)
++|+|||++||++++|++||++|++|+|++|++.+|++|++..++|++||++|+++|.++.+....+++|+|++++...+
T Consensus 481 ~dG~tHq~~edla~lr~iP~l~V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~~~p~~~~~~~~~~~~Ga~vl~~~~~G 560 (675)
T 1itz_A 481 EDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPHLPGTSIEGVEKGGYTISDNSTG 560 (675)
T ss_dssp TTCTTTCCSSHHHHHHSSSSCEEECCCSHHHHHHHHHHHHHCTTSCEEEEECSSCBCCCTTCCHHHHTTSSEEEEECCST
T ss_pred CCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 88877675899998656988599979999999999999997079968997047778887874324404677898406678
Q ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCC
Q ss_conf 99979999828559999999999984899489996598355899988976631257873389981443357301205785
Q 004509 633 NKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKG 712 (748)
Q Consensus 633 ~g~dvtiva~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~ 712 (748)
.++|++||++|+++++|++|++.|+++||+++|||++|++|||++..+|++++++++...+|++|++...||+++++.++
T Consensus 561 ~~~dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~~~~~~ 640 (675)
T 1itz_A 561 NKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTLGWQKYVGAQG 640 (675)
T ss_dssp TCCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTTTHHHHCSSC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCC
T ss_conf 99998999977899999999999986499579997065762100409999997253786299997886521887528986
Q ss_pred CEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 07853757878998899999499998999999983
Q 004509 713 KAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 747 (748)
Q Consensus 713 ~~ig~d~fg~sg~~~~l~~~~gl~~e~I~~~i~~l 747 (748)
.++|+|.|+.+|+.++|++++|+|+++|+++++++
T Consensus 641 ~~ig~d~fg~sg~~~~l~~~~gl~~~~I~~~i~~~ 675 (675)
T 1itz_A 641 KAIGIDKFGASAPAGTIYKEYGITVESIIAAAKSF 675 (675)
T ss_dssp EEECCCSCCCSSCHHHHHHHHTCSHHHHHHHHTTC
T ss_pred EEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHC
T ss_conf 39985889887899999999794999999999859
No 6
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=1.00 E-value=1 Score=1044.21 Aligned_cols=645 Identities=51% Similarity=0.887 Sum_probs=592.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 99999999999999996229988999999899999998530212899999999992997099841799999999199999
Q 004509 88 VEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV 167 (748)
Q Consensus 88 l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~~~ 167 (748)
|++++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|++|++++++|+. +
T Consensus 6 ~~~~a~~iR~~~~~~v~~a~~GH~g~~ls~a~~~~~L~~~~l~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~-~ 84 (673)
T 1r9j_A 6 IEKVANCIRCLAADIVQGGKSGHPGTPMGMAPMSAVLWTEVMKYNSQDPDWVDRDRFVMSNGHGCALQYALLHMAGYN-L 84 (673)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCCHHHHHTHHHHHHHHHTTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCS-C
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCC-C
T ss_conf 999999999999999987299976620799999999999761789778999998818973534899999999985899-9
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCHHH
Q ss_conf 98898535615999999999999996101666355769999999999987520118999975896899998510006365
Q 004509 168 QEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGI 247 (748)
Q Consensus 168 ~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~eG~ 247 (748)
+.++|.+|||++|.++|||++.++||+++++|+||+|++.|+|+|+|.++++++||++++++.+++|||++|||+++||+
T Consensus 85 ~~~~l~~~r~~~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~ 164 (673)
T 1r9j_A 85 TMDDLKGFRQDGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGV 164 (673)
T ss_dssp CHHHHHTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHH
T ss_pred CHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCH
T ss_conf 99999863237999898888778998111669988758999999999987621036666677798799998820102357
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCC-CCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 999999999719990999997799753336664340118988820894799-97069-9999999999999885499988
Q 004509 248 ANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNG-NTGYDDIRAAIKEAKAVTDKPT 325 (748)
Q Consensus 248 ~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG-~~D~~~l~~al~~a~~~~~~P~ 325 (748)
+|||+++|++++|+|+|+|+|||+++|++++.....+++.++|++|||+++ .| || | |++++.+++++|++..++|+
T Consensus 165 ~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~~-d~~~l~~Al~~A~~~~~~P~ 242 (673)
T 1r9j_A 165 CQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSFTEQCHQKYVAMGFHVIEVK-NGDT-DYEGLRKALAEAKATKGKPK 242 (673)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTCCCCHHHHHHHTTCEEEEES-CTTT-CHHHHHHHHHHHHHCCSSCE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHCCCEEEEEE-CCCC-CHHHHHHHHHHHHHCCCCCE
T ss_conf 899999999829893899998899722566300148729999987899699986-7889-99999999999997689988
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999833046899887885544776763359999983299-999998856679989998851111399999999988720
Q 004509 326 LIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGW-PYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKK 404 (748)
Q Consensus 326 vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~-~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~~ 404 (748)
+|+++|+||+|++ .+++.++|+.+++.++++.++++++| +..+|.+|++++..|+...++|...+++|++.+.+|...
T Consensus 243 lI~~~T~kg~G~~-~~~~~~~H~~~~~~ee~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~~~g~~~~~~w~~~~~~~~~~ 321 (673)
T 1r9j_A 243 MIVQTTTIGFGSS-KQGTEKVHGAPLGEEDIANIKAKFGRDPQKKYDVDDDVRAVFRMHIDKCSAEQKAWEELLAKYTAA 321 (673)
T ss_dssp EEEEECCTTTTST-TTTSGGGTSSCCCHHHHHHHHHHTTSCSSCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 9999664345434-478754236889989999999854899766666887899999998861457899999999998765
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC--CCCCCCC
Q ss_conf 97999999988619999751112899999994124999999999999976998799945787874420011--2365545
Q 004509 405 YPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKM--FGDFQKD 482 (748)
Q Consensus 405 ~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~--~~~f~~~ 482 (748)
+|+.+.++++.+.+++|..|...+|.| ++++++|++++++|.++++.+|+++++++|++.|+++..++ ...|+++
T Consensus 322 ~P~~~~~~~~~~~~~~p~~~~~~~p~~---~~~~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~ 398 (673)
T 1r9j_A 322 FPAEGAAFVAQMRGELPSGWEAKLPTN---SSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSS 398 (673)
T ss_dssp CHHHHHHHHHHHTTCCCTTTGGGSCCC---CSCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTT
T ss_pred CHHHHHHHHHHHCCCCCCHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 936789999985588971233413432---53068999999999999965998899936556665664457644002655
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH
Q ss_conf 99997111563057899999999943999721998602479878888998400488759999428975589999999911
Q 004509 483 TPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIE 562 (748)
Q Consensus 483 ~~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~ie 562 (748)
+||+|+||+||+||+|+++|+|||++| |++||+++|++|++|+++|||+.|++++||++++||+|+++|+||+|||+++
T Consensus 399 ~~~~R~id~GIaE~~~~~~a~GlA~~G-G~~P~~~~~~~F~~~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tHq~~e 477 (673)
T 1r9j_A 399 SKEGRYIRFGVREHAMCAILNGLDAHD-GIIPFGGTFLNFIGYALGAVRLAAISHHRVIYVATHDSIGVGEDGPTHQPVE 477 (673)
T ss_dssp BTTCCEEECCSCHHHHHHHHHHHHHHS-SCEEEEEEEGGGGGGGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSS
T ss_pred CCCCCEEECCCCHHHHHHHHHHHHHCC-CCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH
T ss_conf 799876863705899999999999669-9889999608999999999999976599889999798667699974528889
Q ss_pred HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE
Q ss_conf 45788128991999008989999999999874999499997678878877887666456606881489999997999982
Q 004509 563 HLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGT 642 (748)
Q Consensus 563 d~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~~~~~~~G~~~i~~~~~~~g~dvtiva~ 642 (748)
|++++|++||++|++|+|++|++.+|++|++..++|++||++|++.+.++.+....+++|+|++++. +++||+||++
T Consensus 478 dla~lr~iP~l~V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~~~~~~~~~~~~~~~~Ga~vl~~g---~~~dv~lia~ 554 (673)
T 1r9j_A 478 LVAALRAMPNLQVIRPSDQTETSGAWAVALSSIHTPTVLCLSRQNTEPQSGSSIEGVRHGAYSVVDV---PDLQLVIVAS 554 (673)
T ss_dssp HHHHHHHSTTCEEECCSSHHHHHHHHHHHHHCTTCCEEEECCSSEECCCTTCCHHHHHTSCEEEECC---TTCSEEEEEC
T ss_pred HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC---CCCCEEEEEE
T ss_conf 9999747999889958999999999999998689719999717878888874323126887898507---9998899993
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCCCC
Q ss_conf 85599999999999848994899965983558999889766312578733899814433573012057850785375787
Q 004509 643 GSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGA 722 (748)
Q Consensus 643 G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~fg~ 722 (748)
|++|++|++|++.|+++ |+++|||++|++|||+++.+|+.++++...+ +|++|++...||+.+++ .++|+|.|+.
T Consensus 555 G~~v~~al~Aa~~L~~~-i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~-vv~vE~~~~~g~~~~v~---~~~g~d~f~~ 629 (673)
T 1r9j_A 555 GSEVSLAVDAAKALSGE-LRVRVVSMPCQELFDAQPDTYRQAVLPAGVP-VVSVEAYVSFGWEKYSH---AHVGMSGFGA 629 (673)
T ss_dssp GGGHHHHHHHHHHHTTT-CCEEEEECSCHHHHHTSCHHHHHHHSCTTSC-EEEECSSCCTTGGGTCS---EEESCSSCCC
T ss_pred CHHHHHHHHHHHHHHHC-CCEEEEECCCCCHHHCCCHHHHHHHHCCCCE-EEEEECCCCCCHHHHCC---CEEEECCCCC
T ss_conf 62689999999998721-8779996798752110529999998541784-99996897651577549---3587166888
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 89988999994999989999999839
Q 004509 723 SAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 723 sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+|+.++|++++|+|+++|++++++++
T Consensus 630 sg~~~~L~~~~g~~~~~I~~~i~~~l 655 (673)
T 1r9j_A 630 SAPAGVLYKKFGITVEEVVRTGRELA 655 (673)
T ss_dssp SSCHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 89999999997959999999999999
No 7
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=1.00 E-value=1 Score=1040.12 Aligned_cols=653 Identities=50% Similarity=0.862 Sum_probs=594.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 99999999999999996229988999999899999998530212899999999992997099841799999999199999
Q 004509 88 VEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV 167 (748)
Q Consensus 88 l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~~~ 167 (748)
+++++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||+|+||++|++|++++|+|+. +
T Consensus 4 ~~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~-~ 82 (669)
T 2r8o_A 4 RKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYD-L 82 (669)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCS-C
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC-C
T ss_conf 999999999999999987189824874649999999988864689678887789969980751779999999980899-9
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCHHH
Q ss_conf 98898535615999999999999996101666355769999999999987520118999975896899998510006365
Q 004509 168 QEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGI 247 (748)
Q Consensus 168 ~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~eG~ 247 (748)
+.++|.+|||++|.++|||++.++|++++++|++|+|+|.|+|+|+|.++++++||+++.++.+++|||++|||+++||+
T Consensus 83 ~~~~l~~~r~~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~ 162 (669)
T 2r8o_A 83 PMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGI 162 (669)
T ss_dssp CHHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHCCHH
T ss_conf 99999976427998888877557998421455401168999999999987541025676677688699998976743159
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 999999999719990999997799753336664340118988820894799-9706999999999999998854999889
Q 004509 248 ANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNGNTGYDDIRAAIKEAKAVTDKPTL 326 (748)
Q Consensus 248 ~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG~~D~~~l~~al~~a~~~~~~P~v 326 (748)
+|||+++|++++|+|+|+|+|||+|+|++++.....+++.++|++|||+++ .| ||| |++++.++++++++..++|++
T Consensus 163 ~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~-d~~~l~~al~~a~~~~~~P~l 240 (669)
T 2r8o_A 163 SHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDI-DGH-DAASIKRAVEEARAVTDKPSL 240 (669)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHTTCEEEEEE-ETT-CHHHHHHHHHHHHHCCSSCEE
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHCCCEEEEEE-CCC-CHHHHHHHHHHHHHCCCCCEE
T ss_conf 999999999818992899998999673043356647429999987899278677-899-999999999999866899779
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf 99983304689988788554477676335999998329999999885667998999885111139999999998872097
Q 004509 327 IRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYP 406 (748)
Q Consensus 327 I~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~~~p 406 (748)
|+++|+||+|+++.+++.+||+.++++++++.++++++|+..||.++++++..|+.. +++...+.+|++.+.+|...+|
T Consensus 241 I~~~T~kg~G~~~~~~~~~~H~~~~~~ee~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p 319 (669)
T 2r8o_A 241 LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAK-EAGQAKESAWNEKFAAYAKAYP 319 (669)
T ss_dssp EEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHHHHTCCCCTTCCCHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHCH
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCH
T ss_conf 999867326868767877655788998999999998089822356777899999987-5324779999999998765290
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999998861999975111289999----99941249999999999999769987999457878744200112365545
Q 004509 407 EEAAEFKSISSGQLPAGWEKALPTYT----PESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKD 482 (748)
Q Consensus 407 ~~~~~~~~~l~~~~p~~~~~~~p~~~----~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~ 482 (748)
+...++++.+++.+|+.|...+|.+. ..++++++|++++++|.++++.+|+++++++|++.|+++.++++..|++
T Consensus 320 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~- 398 (669)
T 2r8o_A 320 QEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINE- 398 (669)
T ss_dssp HHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTT-
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC-
T ss_conf 7779999985354880334546987644147775379999999999999965887588527555444554445400001-
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH
Q ss_conf 99997111563057899999999943999721998602479878888998400488759999428975589999999911
Q 004509 483 TPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIE 562 (748)
Q Consensus 483 ~~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~ie 562 (748)
+||+|+||+||+||+|+++|+|||++| |++||+.+|++|++|+++|||+.|++++||+++++|+|+++|+||+|||++|
T Consensus 399 ~~p~R~id~GIaE~~~v~~a~GlA~~g-G~~P~~~tf~~F~~~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tHq~~e 477 (669)
T 2r8o_A 399 DAAGNYIHYGVREFGMTAIANGISLHG-GFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVE 477 (669)
T ss_dssp CTTCSEEECCSCHHHHHHHHHHHHHHS-SCEEEEEEEGGGGGTTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSS
T ss_pred CCCCCEEECCHHHHHHHHHHHHHHHCC-CCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH
T ss_conf 289973524550999999999999749-9869886068899999999999985699989999688767689977648889
Q ss_pred HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC--CCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf 457881289919990089899999999998749994999976788788778876--664566068814899999979999
Q 004509 563 HLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSI--DGVEKGAYIISDNSSGNKPDVILI 640 (748)
Q Consensus 563 d~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~~--~~~~~G~~~i~~~~~~~g~dvtiv 640 (748)
|++++|++||++|++|+|++|++.+|++|++..++|++||++|++.+.++.+.. ..+++|+|++++.. +++|++||
T Consensus 478 dla~lr~iP~l~V~~Pad~~E~~~~l~~a~~~~~~Pv~i~~~r~~~~~~~~~~~~~~~~~~G~~vl~~~~--g~~dv~iv 555 (669)
T 2r8o_A 478 QVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCA--GQPELIFI 555 (669)
T ss_dssp HHHHHHTSTTCEEECCSSHHHHHHHHHHHHHCSSSCEEEECCSSEECCCCCCHHHHHHGGGSCEEEECCS--SSCSEEEE
T ss_pred HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCC--CCCCEEEE
T ss_conf 9998548999889966999999999999998479858998478878887876212443137878982368--99999999
Q ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCC
Q ss_conf 82855999999999998489948999659835589998897663125787338998144335730120578507853757
Q 004509 641 GTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRF 720 (748)
Q Consensus 641 a~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~f 720 (748)
++|+++++|++|++.|+++||+++|||++|++|||++..+|++++++++...+|++|++...||+++++.....+|+|.|
T Consensus 556 a~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~g~~~~~~~~~~~ig~d~f 635 (669)
T 2r8o_A 556 ATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTF 635 (669)
T ss_dssp ECGGGHHHHHHHHHHHHHHTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEGGGGHHHHTTSSEEEEECSC
T ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCEEEECCCC
T ss_conf 97789999999999999639976999704578030031999998554457649999378145499986578869982888
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 8789988999994999989999999839
Q 004509 721 GASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 721 g~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+.||+.++|++++|||+++|++++++++
T Consensus 636 g~sg~~~~l~~~~Gl~~~~I~~~~~~~~ 663 (669)
T 2r8o_A 636 GESAPAELLFEEFGFTVDNVVAKAKELL 663 (669)
T ss_dssp CCSSCHHHHHHHTTCSHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 7869999999994989999999999998
No 8
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=1.00 E-value=1 Score=1033.53 Aligned_cols=625 Identities=43% Similarity=0.710 Sum_probs=568.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCC
Q ss_conf 89999999999999999996229988999999899999998530212899999999992997099841799999999199
Q 004509 85 AALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGY 164 (748)
Q Consensus 85 ~~~l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~ 164 (748)
.+.|++++++||.++++|+.++++||+|++||++||+++| .++|+|||+||+|++|||||||+||++|++|++++|+||
T Consensus 3 ~~~l~~~a~~iR~~~i~~v~~a~~GH~g~~lg~~ei~~~L-~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~ 81 (632)
T 3l84_A 3 IQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVL-SYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGY 81 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHH-TTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC
T ss_conf 7999999999999999999744898878376599999999-998574888889999987998287626799999998388
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCC
Q ss_conf 99998898535615999999999999996101666355769999999999987520118999975896899998510006
Q 004509 165 DSVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQM 244 (748)
Q Consensus 165 ~~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~ 244 (748)
. ++.++|.+|||++|.++|||++ ++||+++++|++|+|++.|+|+|+|.++++.+|| ++..+++|||++|||+++
T Consensus 82 ~-~~~~~l~~~r~~~s~~~ghp~~-~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n---~~~~d~~v~~v~GDG~~~ 156 (632)
T 3l84_A 82 D-LSLEDLKNFRQLHSKTPGHPEI-STLGVEIATGPLGQGVANAVGFAMAAKKAQNLLG---SDLIDHKIYCLCGDGDLQ 156 (632)
T ss_dssp S-CCHHHHTTTTCTTCSSCSSCCT-TSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHC---TTTCCCCEEEEEEHHHHH
T ss_pred C-CCHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCEEEEEECCCCHH
T ss_conf 9-9989999875479999899998-8998211785166579999999997876443334---577898699998876120
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 36599999999971999099999779975333666434011898882089479997069999999999999988549998
Q 004509 245 EGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKP 324 (748)
Q Consensus 245 eG~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~DG~~D~~~l~~al~~a~~~~~~P 324 (748)
||++|||+++|++++|+|+|+|+|||+++|++++.....+++.++|++|||+++.| ||| |++++.+++++|++ .++|
T Consensus 157 eG~~~Eal~~A~~~~L~~livi~nnN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~v-dGh-d~~~l~~al~~A~~-~~~P 233 (632)
T 3l84_A 157 EGISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSI-NGH-DYEEINKALEQAKK-STKP 233 (632)
T ss_dssp SHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHTTCEEEEE-ETT-CHHHHHHHHHHHHT-CSSC
T ss_pred HCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEE-EEC-CHHHHHHHHHHHHH-CCCC
T ss_conf 23199999999982989189999889825656631213760999999869828999-528-88999999998875-7999
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999833046899887885544776763359999983299-99999885667998999885111139999999998872
Q 004509 325 TLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGW-PYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEK 403 (748)
Q Consensus 325 ~vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~-~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~ 403 (748)
++|+++|+||+|+++++++.+||+.++++++++.++++++| +.+||.+++++++.|++..+.|...+.+|++.+.+ +
T Consensus 234 ~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~~~~l~~~~~~~f~v~~~~~~~~~~~~~~g~~~~~~w~~~~~~--~ 311 (632)
T 3l84_A 234 CLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEK--S 311 (632)
T ss_dssp EEEEEECCTTTTCGGGTTCGGGSSSCCCHHHHHHHHHHHTCCTTCCSCCCHHHHHHHHTHHHHHHHHHHHHHHHHHH--S
T ss_pred EEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC--C
T ss_conf 89997667301578777862214899999999999998289988985578678999998876331457889998623--1
Q ss_pred HCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 09799999998861999975111289999999412499999999999997699879994578787442001123655459
Q 004509 404 KYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDT 483 (748)
Q Consensus 404 ~~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~ 483 (748)
.+|+.+.++ .|+.|...+|.+.. ..+.++|+++++.|.++++.+|+++++++|+++|+++.++ +.+ +
T Consensus 312 ~~p~~~~~~-------~p~~~~~~~~~~~~-~~~~a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~~~~~~----~~~-~ 378 (632)
T 3l84_A 312 AKKELLERL-------LNPDFNKIAYPDFK-GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELH----SMG-D 378 (632)
T ss_dssp SCHHHHHHH-------HSCCSTTCCCCCCT-TCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCT----TSC-B
T ss_pred CCCHHHHHH-------CCCCHHHHCCHHCC-CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH----CCC-C
T ss_conf 373256663-------86312231200002-3106789999999999996699879982444776573110----134-4
Q ss_pred C-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH
Q ss_conf 9-997111563057899999999943999721998602479878888998400488759999428975589999999911
Q 004509 484 P-EERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIE 562 (748)
Q Consensus 484 ~-p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~ie 562 (748)
| |+|+||+||+||+|+++|+|||++|+ ++||+++|++|++|+++|||+.|++++||+++++|+|+++|+||+|||+++
T Consensus 379 f~p~R~~d~GIaE~~~v~~a~GlA~~gG-~~P~~~~f~~F~~~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq~~e 457 (632)
T 3l84_A 379 FVEGKNIHFGIREHAMAAINNAFARYGI-FLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIE 457 (632)
T ss_dssp TTTSSEEECCSCHHHHHHHHHHHHHHSS-CEEEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCC-CEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH
T ss_conf 6998768707229999999999997599-879999639999999999999864698989999799868889988878776
Q ss_pred HHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCCCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf 4578812899199900898999999999987499949999767887887788--76664566068814899999979999
Q 004509 563 HLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGT--SIDGVEKGAYIISDNSSGNKPDVILI 640 (748)
Q Consensus 563 d~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~--~~~~~~~G~~~i~~~~~~~g~dvtiv 640 (748)
|+++||++||++|++|+|++|++++|++|++ .++|++||++|+.+ ++.+ ....+.+|+|++++.+ |+|+|||
T Consensus 458 d~a~lr~iP~l~V~~P~d~~e~~~~l~~A~~-~~~Pv~ir~~r~~~--~~~~~~~~~~~~~g~~vl~~~~---g~dvtii 531 (632)
T 3l84_A 458 QLSTFRAMPNFLTFRPADGVENVKAWQIALN-ADIPSAFVLSRQKL--KALNEPVFGDVKNGAYLLKESK---EAKFTLL 531 (632)
T ss_dssp HHHHHHHSSSCEEECCSSHHHHHHHHHHHHH-CSSCEEEECCSSCB--CCCCCCSBCCGGGSSEEEECCT---TCSEEEE
T ss_pred HHHHHHCCCCCEEEECCCHHHHHHHHHHHHH-CCCCEEEEECCCCC--CCCCCCCCCCCCCCCEEEEECC---CCCEEEE
T ss_conf 9999845899889940999999999999874-79988999717777--7875322112466518998659---9988999
Q ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCC
Q ss_conf 82855999999999998489948999659835589998897663125787338998144335730120578507853757
Q 004509 641 GTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRF 720 (748)
Q Consensus 641 a~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~f 720 (748)
++|+||++|++||+.|+++||+++|||++|++|||.++.+|++++++ + . +|++|++...||+++++ .++|+|+|
T Consensus 532 a~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~~i~PlD~~~~~~~~sv~~-~-~-vv~vE~~~~~g~~~~~~---~~iGid~F 605 (632)
T 3l84_A 532 ASGSEVWLCLESANELEKQGFACNVVSMPCFELFEKQDKAYQERLLK-G-E-VIGVEAAHSNELYKFCH---KVYGIESF 605 (632)
T ss_dssp ECGGGHHHHHHHHHHHHHTTCCEEEEECSBHHHHHTSCHHHHHHHCC-S-E-EEEECSSCCGGGGGTCS---EEECCCSC
T ss_pred EECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC-C-C-EEEEECCHHHHHHHHHC---EEEECCCC
T ss_conf 94669999999999998669976999627687756028999998658-9-8-99995980524889729---29985788
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 87899889999949999899999998
Q 004509 721 GASAPAGKIYKEFGITAEAVITAAKE 746 (748)
Q Consensus 721 g~sg~~~~l~~~~gl~~e~I~~~i~~ 746 (748)
+.||+.++|++++|||+++|++++++
T Consensus 606 g~sg~~~~l~~~~Glt~~~I~~~i~~ 631 (632)
T 3l84_A 606 GESGKDKDVFERFGFSVSKLVNFILS 631 (632)
T ss_dssp CCSSCHHHHHHHTTCSHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 26689999999969699999999963
No 9
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=1.00 E-value=1 Score=1032.26 Aligned_cols=649 Identities=53% Similarity=0.879 Sum_probs=592.2
Q ss_pred HHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 9999-999999999999962299889999998999999985302128999999999929970998417999999991999
Q 004509 87 LVEK-SVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYD 165 (748)
Q Consensus 87 ~l~~-~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~ 165 (748)
.|++ ++++||.++++|+.++++||+|++||++||+++||++ |+|||+||+|++|||||+|+||++|++|++++|+|+.
T Consensus 6 ~l~~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~-~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~ 84 (680)
T 1gpu_A 6 DIDKLAVSTIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYD 84 (680)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHT-CCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 789999999999999998771898148756499999999973-7879568998789979982612779999999984799
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCH
Q ss_conf 99988985356159999999999999961016663557699999999999875201189999758968999985100063
Q 004509 166 SVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQME 245 (748)
Q Consensus 166 ~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~e 245 (748)
++.++|.+|||++|.++|||++ ++||+++++|++|+|+|.|+|+|+|.++++++||+++.++.+++|||++|||+++|
T Consensus 85 -~~~~~l~~~r~~g~~~~ghp~~-~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~e 162 (680)
T 1gpu_A 85 -LSIEDLKQFRQLGSRTPGHPEF-ELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQE 162 (680)
T ss_dssp -CCHHHHTTTTCTTCSCCSSCCT-TSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHS
T ss_pred -CCHHHHHHHCCCCCCCCCCCCC-CCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCH
T ss_conf -9999998623269988888876-68982215656345189999999999875332356766777876999989875430
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 65999999999719990999997799753336664340118988820894799-97069999999999999988549998
Q 004509 246 GIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNGNTGYDDIRAAIKEAKAVTDKP 324 (748)
Q Consensus 246 G~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG~~D~~~l~~al~~a~~~~~~P 324 (748)
|++|||+++|++++|+|+|+|+|||+|+|++++.....+++.++|++|||+++ .| |||+|++++.+++++|++..++|
T Consensus 163 G~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~~d~~~l~~al~~A~~~~~~P 241 (680)
T 1gpu_A 163 GISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISFDEDVAKRYEAYGWEVLYVE-NGNEDLAGIAKAIAQAKLSKDKP 241 (680)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHHTCEEEEES-CTTTCHHHHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCEEEEEE-CCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 25999999999848994899998899268524233568559999876697399995-49899999999999999779997
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 89999833046899887885544776763359999983299-999998856679989998-8511113999999999887
Q 004509 325 TLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGW-PYEPFHVPEDVKKHWSRH-VAEGATLEAEWNAKFAEYE 402 (748)
Q Consensus 325 ~vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~-~~~p~~v~~e~~~~~~~~-~~~g~~~~~~w~~~~~~~~ 402 (748)
++|+++|+||+|++ .+++.+||+.++++++++..+++++| +..+|.+++++++.|+.. .++|.....+|++.+.++.
T Consensus 242 ~lI~~~T~kg~G~~-~~~~~~~H~~~~~~ee~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 320 (680)
T 1gpu_A 242 TLIKMTTTIGYGSL-HAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQ 320 (680)
T ss_dssp EEEEEECCTTTTST-TTTSGGGSSSCCCHHHHHHHHHHTTCCTTCCSCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999845356636-57787657787998999999997499967775688789999998876530788999999999877
Q ss_pred HHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 20979999999886199997511128999999941249999999999999769987999457878744200112365545
Q 004509 403 KKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKD 482 (748)
Q Consensus 403 ~~~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~ 482 (748)
+.+|+.+.++++.+.+++|..|...+|.|...+++++||++++++|.++++.+|+++++++|++.|+++.++++..|++.
T Consensus 321 ~~~p~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~ 400 (680)
T 1gpu_A 321 KKFPELGAELARRLSGQLPANWESKLPTYTAKDSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEALDFQPP 400 (680)
T ss_dssp HHCHHHHHHHHHHHTTCCCTTGGGGSCCCCTTSCCBCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEECCT
T ss_pred HHCHHHHHHHHHHHCCCCCCHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 54968899999985266880133433011357864599999999999999659987999565555544544666453666
Q ss_pred -----CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC-CEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf -----9999711156305789999999994399972-1998602479878888998400488759999428975589999
Q 004509 483 -----TPEERNVRFGVREHGMGAICNGIALHSPGLI-PYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGP 556 (748)
Q Consensus 483 -----~~p~R~i~~GIaE~~~vg~AaGlA~~G~~~~-Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~ 556 (748)
+||+|+||+||+||+|+++|+|||++|. ++ ||+.+|++|++|+++|||+.|++++||++++||+|+++|+||+
T Consensus 401 ~~~~~~~p~R~~d~gIaE~~~vg~a~GlA~~Gg-~~~P~~~~f~~F~~~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~ 479 (680)
T 1gpu_A 401 SSGSGNYSGRYIRYGIREHAMGAIMNGISAFGA-NYKPYGGTFLNFVSYAAGAVRLSALSGHPVIWVATHDSIGVGEDGP 479 (680)
T ss_dssp TTSSEETTCCEEECCSCHHHHHHHHHHHHHHCT-TCEEEEEEEHHHHGGGHHHHHHHHHHTCCCEEEEECCSGGGCTTCT
T ss_pred CCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCC-CCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
T ss_conf 444568998644178169999999999986399-8227996559899999999999875589989998178646589888
Q ss_pred CCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 99991145788128991999008989999999999874999499997678878877887666456606881489999997
Q 004509 557 THQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPD 636 (748)
Q Consensus 557 tHq~ied~a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~~~~~~~G~~~i~~~~~~~g~d 636 (748)
|||++||+++||++||++|++|+|++|++++|++|++..++|++||++|++++.++.+....+++|+|++++.+ ++|
T Consensus 480 tHq~~edla~lr~iP~l~V~~Pad~~e~~~~l~~A~~~~~~Pv~i~~~r~~~~~~~~~~~~~~~~G~~vl~~g~---~~d 556 (680)
T 1gpu_A 480 THQPIETLAHFRSLPNIQVWRPADGNEVSAAYKNSLESKHTPSIIALSRQNLPQLEGSSIESASKGGYVLQDVA---NPD 556 (680)
T ss_dssp TTCCSSHHHHHHTSSSCEEECCCSHHHHHHHHHHHHHCSSCCEEEECCSSCBCCCTTCCHHHHTTSCEEEECCS---SCS
T ss_pred CCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEECCC---CCC
T ss_conf 65799999986579998899559999999999999985799689994587788778741111357778983289---999
Q ss_pred EEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEE
Q ss_conf 99998285599999999999848994899965983558999889766312578733899814433573012057850785
Q 004509 637 VILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIG 716 (748)
Q Consensus 637 vtiva~G~~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig 716 (748)
|+||++|++|++|++|++.|+++||+++|||++|++|||.++.+|++++++++... |++|++...||+++++ ..+|
T Consensus 557 vtiva~G~~v~~al~Aa~~L~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~-v~vE~~~~~g~~~~v~---~~~g 632 (680)
T 1gpu_A 557 IILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPI-MSVEVLATTCWGKYAH---QSFG 632 (680)
T ss_dssp EEEEECTHHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCE-EEECSSCSTTGGGTCS---EEEC
T ss_pred EEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCE-EEEECCCCCCHHHHCC---CCEE
T ss_conf 99999767999999999999863997799971777802231699999873647866-9995786554888618---5354
Q ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 37578789988999994999989999999839
Q 004509 717 IDRFGASAPAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 717 ~d~fg~sg~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
++.|+.+|+.++|++++|+|+++|++++++++
T Consensus 633 v~~f~~~g~~~~l~~~~gl~~~~I~~~i~~~l 664 (680)
T 1gpu_A 633 IDRFGASGKAPEVFKFFGFTPEGVAERAQKTI 664 (680)
T ss_dssp CCSCCCCSCHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 27688889999999997959999999999999
No 10
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=1022.36 Aligned_cols=645 Identities=52% Similarity=0.887 Sum_probs=588.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
Q ss_conf 99999999999999999962299889999998999999985302128999999999929970998417999999991999
Q 004509 86 ALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYD 165 (748)
Q Consensus 86 ~~l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~i~~~L~~~~l~~~~~~p~~~~rDr~v~s~GH~~~~lya~l~l~G~~ 165 (748)
++.++++++||.++++|+.++++||+|++||++||+++||+++|+|||+||+|++|||||||+||++|++|++++++|+.
T Consensus 6 ~~~~~~a~~iR~~~~~~v~~a~~GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~~lYa~l~l~G~~ 85 (651)
T 2e6k_A 6 DLETLSVNAIRFLAIDAVEKARSGHPGMPMGMAPLAYLLFREVMRHNPLDPDWPDRDRFVLSAGHGSMLLYAVLHLTGYD 85 (651)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 69999999999999999987189824764659999999999974679668998889969996751459999999980899
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHCCH
Q ss_conf 99988985356159999999999999961016663557699999999999875201189999758968999985100063
Q 004509 166 SVQEDDLKNFRQWGSKTPGHPENFETPGIEVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQME 245 (748)
Q Consensus 166 ~~~~~~L~~~r~~~s~~~Ghp~~~~~pgi~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~v~~iiGDG~~~e 245 (748)
++.++|.+|||++|.++|||++.++||+++++|++|+|++.|+|+|+|.++++++||++++++.+++|||++|||+++|
T Consensus 86 -~~~~~l~~~r~~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~e 164 (651)
T 2e6k_A 86 -LPLEELKSFRQWGSKTPGHPERGHTPGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLME 164 (651)
T ss_dssp -CCHHHHTTTTSTTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHS
T ss_pred -CCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHCH
T ss_conf -9999999752269989988987789983224664235489999999987765131356666777987999988415221
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEE-EECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 65999999999719990999997799753336664340118988820894799-97069999999999999988549998
Q 004509 246 GIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVI-WVKNGNTGYDDIRAAIKEAKAVTDKP 324 (748)
Q Consensus 246 G~~~EAl~~A~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~-~v~DG~~D~~~l~~al~~a~~~~~~P 324 (748)
|++|||+++|++++|+|+|+|+|||+|+|++++.....+++.++|++|||+++ .| ||| |++++.+++++|++ .++|
T Consensus 165 G~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~~~d~~~~~~a~G~~~~~~v-dG~-d~~~l~~al~~a~~-~~~P 241 (651)
T 2e6k_A 165 GVSGEAASLAGHWGLSKLIVFWDDNRISIDGPTDLAFTEDVLARYRAYGWQTLRVE-DVN-DLEALRKAIKLAKL-DERP 241 (651)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEECCEETTEEGGGTCCSCHHHHHHHTTCEEEEES-CTT-CHHHHHHHHHHHHH-SSSC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEE-CCC-CHHHHHHHHHHHHH-CCCC
T ss_conf 28999999999808991999998999402356155557359999885898489875-899-99999999999987-7999
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999833046899887885544776763359999983299999998856679989998851111399999999988720
Q 004509 325 TLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKK 404 (748)
Q Consensus 325 ~vI~~~T~kg~G~~~~~~~~~~H~~~l~~~~~~~~~~~~~~~~~p~~v~~e~~~~~~~~~~~g~~~~~~w~~~~~~~~~~ 404 (748)
++|+++|+||+|++ .+++.+||+.++++++++.++++++|+.++|.++++++..|+.. +++.....+|++.+.++...
T Consensus 242 ~lI~~~t~kg~G~~-~~~~~~~H~~~~~~~e~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 319 (651)
T 2e6k_A 242 TLIAVRSHIGFGSP-KQDSAKAHGEPLGPEAVEATRRNLGWPYPPFVVPEEVYRHMDMR-EKGRAWQEAWEKALEAYARA 319 (651)
T ss_dssp EEEEEECCTTTTST-TTTSGGGTSSCCHHHHHHHHHHHHTCCCCTTCCCHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHH
T ss_conf 89998767504403-46530010568999999999987599823455876899999976-41226689999999875542
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97999999988619999751112899999994124999999999999976998799945787874420011236554599
Q 004509 405 YPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTP 484 (748)
Q Consensus 405 ~p~~~~~~~~~l~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~ 484 (748)
+|+.+.++++.+.++.|. |...+|.+ .++.++|++++++|.++++.+|+++++++|+++|+++..+++..|++++|
T Consensus 320 ~p~~~~~~~~~~~~~~p~-~~~~~~~~---~~~~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~ 395 (651)
T 2e6k_A 320 YPDLHQELMRRLRGELPP-LPEEPPSF---DKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP 395 (651)
T ss_dssp CHHHHHHHHHHHTTCCCC-CCCSCCCC---CSCBCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT
T ss_pred CHHHHHHHHHHHCCCCCC-HHHHCCCC---CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 857789999985176883-24432555---75278999999999999955998899967655554554234445476689
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHH
Q ss_conf 99711156305789999999994399972199860247987888899840048875999942897558999999991145
Q 004509 485 EERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHL 564 (748)
Q Consensus 485 p~R~i~~GIaE~~~vg~AaGlA~~G~~~~Pi~~~f~~F~~ra~~qir~~a~~~~pvi~v~t~~g~~~g~dG~tHq~ied~ 564 (748)
|+|+||+||+||+|+++|+|||++|. ++||+++|++|++|+++|||+.|++++||+++++|+|+++|++|+|||++||+
T Consensus 396 p~R~i~~gIaE~~~~~~a~GlA~~Gg-~~P~~~t~~~F~~~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tHq~~edl 474 (651)
T 2e6k_A 396 LGRYLHFGVREHAMGAILNGLNLHGG-YRAYGGTFLVFSDYMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTHQPVEHL 474 (651)
T ss_dssp TCCEEECCSCHHHHHHHHHHHHHHSS-CEEEEEEEGGGGGGSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred CCCEEECCCCHHHHHHHHHHHHHCCC-CEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHH
T ss_conf 97647537088999999999997299-87999758999999999999987459898999978854669986755559999
Q ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECH
Q ss_conf 78812899199900898999999999987499949999767887887788766645660688148999999799998285
Q 004509 565 ASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGS 644 (748)
Q Consensus 565 a~lr~iPg~~V~~P~d~~e~~~~l~~al~~~~~P~~irl~r~~~~~~~~~~~~~~~~G~~~i~~~~~~~g~dvtiva~G~ 644 (748)
+++|++||++|++|+|++|++.++++|++..++|++||++|++.+.++.+....+++|+|++++.+ ++|++||++|+
T Consensus 475 a~lr~iP~l~V~~Pad~~E~~~~l~~A~~~~~~Pv~i~~~r~~~~~~~~~~~~~~~~G~~vl~~g~---~~dv~iva~G~ 551 (651)
T 2e6k_A 475 MSLRAMPNLFVIRPADAYETFYAWLVALRRKEGPTALVLTRQAVPLLSPEKARGLLRGGYVLEDVE---EPQGVLVATGS 551 (651)
T ss_dssp HHHHTSTTCEEECCSSHHHHHHHHHHHHHCCSSCEEEECCSSCBCCCCHHHHGGGGGSSEEEECCS---SCSEEEEECTT
T ss_pred HHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEECC---CCCEEEEEECH
T ss_conf 996079996899549999999999999970899789998588788878630455447788985379---99999999777
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCEEEECCCCCCC
Q ss_conf 59999999999984899489996598355899988976631257873389981443357301205785078537578789
Q 004509 645 ELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASA 724 (748)
Q Consensus 645 ~v~~al~AA~~L~~~Gi~v~VId~~sl~pld~~~~~~~~~v~~~~~~~vv~vE~~~~~G~~~~v~~~~~~ig~d~fg~sg 724 (748)
++++|++|++.|+++||+++|||++|++|||.+..+|+++++++... +|++|++...||++++. .++|+|.|+.||
T Consensus 552 ~v~~al~Aa~~L~~~Gi~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~~-vv~vE~~~~~G~~~~v~---~~ig~d~f~~sg 627 (651)
T 2e6k_A 552 EVHLALRAQALLREKGVRVRVVSLPSFELFAAQPEAYRKEVLPPGLP-VVAVEAGASLGWERYAH---KVVALDRFGASA 627 (651)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTSC-EEEECSSCCTTGGGTCS---EEECCCSCCCSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCE-EEEEECCCCCCHHHHCC---CEEEECCCCCCC
T ss_conf 99999999999996599579983476773200309999997176873-99996886675677279---789958888889
Q ss_pred CHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 988999994999989999999839
Q 004509 725 PAGKIYKEFGITAEAVITAAKEVC 748 (748)
Q Consensus 725 ~~~~l~~~~gl~~e~I~~~i~~ll 748 (748)
+.++|++++|+|+++|++++++++
T Consensus 628 ~~~~l~~~~gl~~~~I~~~i~~~l 651 (651)
T 2e6k_A 628 PYPEVYERLGFTPERVAEAFLSLV 651 (651)
T ss_dssp CTTHHHHHTTCCHHHHHHHHHTTC
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 999999996979999999999759
Done!