Query 004512
Match_columns 748
No_of_seqs 455 out of 2869
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 00:39:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 6E-176 1E-180 1553.5 75.6 745 2-748 4-759 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 4E-155 8E-160 1367.0 72.3 656 50-748 93-765 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 2E-146 4E-151 1303.2 72.9 658 48-748 8-675 (797)
4 PRK14501 putative bifunctional 100.0 9E-133 2E-137 1187.2 72.1 649 51-748 1-654 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 6E-125 1E-129 1085.8 53.9 651 50-748 2-654 (732)
6 PRK10117 trehalose-6-phosphate 100.0 2E-119 3E-124 1000.1 47.0 456 50-543 1-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-118 5E-123 1001.1 49.5 462 56-540 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 1E-118 2E-123 1006.1 35.4 467 52-540 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 2E-112 5E-117 937.3 45.7 468 45-541 9-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 4E-107 9E-112 915.4 50.0 454 52-539 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.1E-97 2E-102 843.9 49.8 459 52-538 1-459 (460)
12 COG1877 OtsB Trehalose-6-phosp 100.0 2.9E-33 6.2E-38 290.4 16.4 172 572-748 5-179 (266)
13 TIGR02468 sucrsPsyn_pln sucros 100.0 2.4E-29 5.2E-34 299.3 46.1 502 191-747 311-952 (1050)
14 PF02358 Trehalose_PPase: Treh 100.0 1.6E-32 3.4E-37 285.0 11.0 159 589-748 1-162 (235)
15 PLN02151 trehalose-phosphatase 100.0 6.1E-28 1.3E-32 259.5 18.7 161 581-748 94-265 (354)
16 PLN02580 trehalose-phosphatase 100.0 5.3E-28 1.1E-32 262.9 18.3 161 578-747 112-296 (384)
17 TIGR00685 T6PP trehalose-phosp 99.9 6.5E-27 1.4E-31 244.3 18.1 160 583-748 1-164 (244)
18 PLN03017 trehalose-phosphatase 99.9 3.1E-26 6.8E-31 246.9 18.3 162 579-748 105-279 (366)
19 cd03792 GT1_Trehalose_phosphor 99.9 5.3E-25 1.2E-29 243.3 27.5 301 166-540 63-371 (372)
20 PRK15484 lipopolysaccharide 1, 99.9 3.7E-24 7.9E-29 237.9 32.8 269 191-540 100-377 (380)
21 PLN02939 transferase, transfer 99.9 4E-24 8.6E-29 251.4 34.4 318 170-542 591-968 (977)
22 PRK00654 glgA glycogen synthas 99.9 2.9E-24 6.2E-29 245.0 30.0 294 191-541 119-463 (466)
23 PLN02316 synthase/transferase 99.9 1.5E-23 3.2E-28 250.8 34.8 309 168-542 688-1035(1036)
24 TIGR02472 sucr_P_syn_N sucrose 99.9 1E-23 2.2E-28 238.8 30.4 297 191-538 115-438 (439)
25 PRK14098 glycogen synthase; Pr 99.9 7.4E-24 1.6E-28 242.3 28.7 319 167-541 119-486 (489)
26 TIGR02095 glgA glycogen/starch 99.9 3E-23 6.6E-28 237.0 30.8 292 191-539 129-471 (473)
27 PRK14099 glycogen synthase; Pr 99.9 2.2E-23 4.8E-28 238.1 28.2 295 192-543 135-481 (485)
28 TIGR03449 mycothiol_MshA UDP-N 99.9 2.1E-22 4.5E-27 224.8 34.2 287 191-541 102-402 (405)
29 cd03818 GT1_ExpC_like This fam 99.9 5.3E-23 1.2E-27 229.4 27.3 284 192-535 89-395 (396)
30 PRK15427 colanic acid biosynth 99.9 2.6E-22 5.7E-27 224.9 31.1 275 191-540 119-405 (406)
31 TIGR02470 sucr_synth sucrose s 99.9 8.2E-22 1.8E-26 231.2 36.0 339 167-538 362-745 (784)
32 TIGR02149 glgA_Coryne glycogen 99.9 1.5E-21 3.2E-26 216.1 32.0 284 191-540 84-386 (388)
33 cd03796 GT1_PIG-A_like This fa 99.9 6.7E-22 1.5E-26 220.8 29.5 276 192-543 90-370 (398)
34 PLN02871 UDP-sulfoquinovose:DA 99.9 6.8E-22 1.5E-26 225.5 29.9 282 184-543 140-437 (465)
35 PLN00142 sucrose synthase 99.9 1.2E-21 2.6E-26 229.8 31.5 329 167-538 385-768 (815)
36 cd03791 GT1_Glycogen_synthase_ 99.9 1.2E-21 2.5E-26 223.9 30.8 311 170-538 110-474 (476)
37 cd03800 GT1_Sucrose_synthase T 99.9 3.9E-21 8.5E-26 212.4 30.8 285 191-535 102-397 (398)
38 TIGR03088 stp2 sugar transfera 99.9 7.1E-21 1.5E-25 210.0 31.5 231 246-540 136-372 (374)
39 cd03813 GT1_like_3 This family 99.9 6.8E-22 1.5E-26 226.0 23.6 276 189-536 172-472 (475)
40 cd04951 GT1_WbdM_like This fam 99.9 1.4E-20 3E-25 204.6 30.3 280 182-538 73-358 (360)
41 cd05844 GT1_like_7 Glycosyltra 99.9 1.9E-20 4.2E-25 205.0 29.5 274 183-535 77-365 (367)
42 cd03819 GT1_WavL_like This fam 99.9 3.9E-20 8.5E-25 201.2 30.1 268 185-525 75-349 (355)
43 cd03806 GT1_ALG11_like This fa 99.9 3.4E-20 7.3E-25 208.7 28.6 272 188-528 107-414 (419)
44 cd04962 GT1_like_5 This family 99.9 1E-19 2.2E-24 199.5 31.6 285 177-539 74-369 (371)
45 cd03812 GT1_CapH_like This fam 99.9 6.7E-20 1.4E-24 199.6 28.4 257 184-513 76-338 (358)
46 PRK10307 putative glycosyl tra 99.9 2.1E-19 4.6E-24 201.4 32.7 282 191-541 107-408 (412)
47 cd03805 GT1_ALG2_like This fam 99.9 8.7E-20 1.9E-24 202.2 29.1 281 190-533 94-391 (392)
48 PLN02949 transferase, transfer 99.9 2.5E-19 5.4E-24 203.3 31.2 314 141-542 109-458 (463)
49 PRK15490 Vi polysaccharide bio 99.9 2.1E-19 4.7E-24 202.7 30.1 289 183-540 275-575 (578)
50 cd03822 GT1_ecORF704_like This 99.9 1.9E-19 4.1E-24 195.2 28.5 278 191-538 77-365 (366)
51 cd03793 GT1_Glycogen_synthase_ 99.9 1.1E-19 2.4E-24 205.0 26.1 316 191-539 149-585 (590)
52 PRK15179 Vi polysaccharide bio 99.8 1.5E-19 3.2E-24 212.4 27.7 277 192-537 402-690 (694)
53 cd03809 GT1_mtfB_like This fam 99.8 1.1E-19 2.5E-24 196.8 24.6 273 191-535 86-364 (365)
54 PRK10187 trehalose-6-phosphate 99.8 2.3E-20 4.9E-25 197.3 18.3 155 585-748 14-171 (266)
55 cd03821 GT1_Bme6_like This fam 99.8 4.3E-19 9.2E-24 191.6 28.3 274 191-535 88-374 (375)
56 cd04946 GT1_AmsK_like This fam 99.8 1.1E-18 2.5E-23 195.7 31.9 271 189-535 126-406 (407)
57 cd03799 GT1_amsK_like This is 99.8 7.7E-19 1.7E-23 190.6 29.4 264 191-532 80-353 (355)
58 cd03817 GT1_UGDG_like This fam 99.8 7.5E-19 1.6E-23 189.9 28.7 267 184-526 80-362 (374)
59 TIGR02918 accessory Sec system 99.8 1.1E-18 2.4E-23 199.8 31.4 271 190-539 211-498 (500)
60 cd03807 GT1_WbnK_like This fam 99.8 1E-18 2.2E-23 188.0 29.4 280 185-537 77-363 (365)
61 PRK10125 putative glycosyl tra 99.8 4.6E-19 9.9E-24 198.5 25.9 187 289-539 212-403 (405)
62 cd03801 GT1_YqgM_like This fam 99.8 2.4E-18 5.1E-23 184.1 30.1 283 183-538 80-373 (374)
63 cd03814 GT1_like_2 This family 99.8 1.3E-18 2.9E-23 188.1 28.1 273 185-538 80-363 (364)
64 cd03794 GT1_wbuB_like This fam 99.8 2.1E-18 4.6E-23 186.9 29.2 275 191-534 100-393 (394)
65 PHA01633 putative glycosyl tra 99.8 2.7E-19 5.9E-24 193.7 20.5 194 294-535 118-334 (335)
66 cd03798 GT1_wlbH_like This fam 99.8 3E-18 6.6E-23 184.2 28.2 279 191-540 94-376 (377)
67 cd04949 GT1_gtfA_like This fam 99.8 1.5E-18 3.3E-23 191.2 25.3 265 190-533 99-371 (372)
68 PLN02501 digalactosyldiacylgly 99.8 8.4E-19 1.8E-23 199.7 23.5 318 127-537 379-706 (794)
69 cd03820 GT1_amsD_like This fam 99.8 3.4E-18 7.4E-23 182.3 26.0 260 191-535 84-347 (348)
70 PLN02846 digalactosyldiacylgly 99.8 2E-18 4.4E-23 193.8 24.4 268 183-539 111-390 (462)
71 cd03823 GT1_ExpE7_like This fa 99.8 1.2E-17 2.7E-22 179.9 28.6 262 182-536 90-355 (359)
72 cd03808 GT1_cap1E_like This fa 99.8 8.5E-18 1.8E-22 180.0 26.9 276 184-535 76-358 (359)
73 PRK09922 UDP-D-galactose:(gluc 99.8 4E-18 8.7E-23 187.8 24.2 239 183-508 79-326 (359)
74 cd03816 GT1_ALG1_like This fam 99.8 1.1E-17 2.5E-22 188.0 27.7 273 191-536 96-409 (415)
75 PHA01630 putative group 1 glyc 99.8 1.2E-17 2.6E-22 182.0 24.6 211 246-539 94-329 (331)
76 TIGR03087 stp1 sugar transfera 99.8 6.2E-17 1.4E-21 180.8 28.7 215 245-538 171-394 (397)
77 cd03795 GT1_like_4 This family 99.8 3.4E-17 7.5E-22 177.8 25.9 260 191-525 84-350 (357)
78 cd03802 GT1_AviGT4_like This f 99.8 1E-16 2.2E-21 172.9 25.3 240 191-536 88-332 (335)
79 cd03804 GT1_wbaZ_like This fam 99.8 1.1E-16 2.4E-21 175.1 25.8 196 244-533 151-349 (351)
80 cd04955 GT1_like_6 This family 99.8 1.8E-16 4E-21 172.7 26.6 265 192-538 86-362 (363)
81 cd03811 GT1_WabH_like This fam 99.8 1.5E-16 3.3E-21 169.6 25.0 243 192-506 83-332 (353)
82 cd03825 GT1_wcfI_like This fam 99.8 1.6E-16 3.6E-21 173.0 25.1 194 289-539 159-363 (365)
83 PRK05749 3-deoxy-D-manno-octul 99.7 1.4E-15 2.9E-20 171.6 28.0 286 181-539 117-418 (425)
84 PLN02275 transferase, transfer 99.7 1.1E-16 2.4E-21 177.4 18.2 237 191-504 101-371 (371)
85 COG0297 GlgA Glycogen synthase 99.7 2E-15 4.3E-20 170.1 27.9 296 191-541 131-478 (487)
86 PF00534 Glycos_transf_1: Glyc 99.7 1.1E-15 2.5E-20 149.7 15.5 155 324-520 13-171 (172)
87 TIGR01484 HAD-SF-IIB HAD-super 99.6 1E-14 2.2E-19 147.9 12.4 152 587-748 1-160 (204)
88 KOG1111 N-acetylglucosaminyltr 99.6 3.5E-14 7.7E-19 149.1 13.5 190 263-506 144-335 (426)
89 cd04950 GT1_like_1 Glycosyltra 99.5 6.6E-13 1.4E-17 147.3 24.0 266 187-539 99-370 (373)
90 PLN02605 monogalactosyldiacylg 99.5 1.4E-11 3E-16 137.3 27.1 191 290-536 174-377 (382)
91 KOG0853 Glycosyltransferase [C 99.4 5.3E-11 1.2E-15 132.7 22.1 184 326-542 273-465 (495)
92 COG0438 RfaG Glycosyltransfera 99.3 7.2E-11 1.6E-15 124.4 20.3 198 290-541 173-377 (381)
93 PRK13609 diacylglycerol glucos 99.3 6.8E-10 1.5E-14 123.4 26.5 268 178-541 94-372 (380)
94 PRK00726 murG undecaprenyldiph 99.3 1.9E-10 4.2E-15 126.5 21.5 256 182-538 85-355 (357)
95 cd01635 Glycosyltransferase_GT 99.3 1.8E-10 3.8E-15 116.0 18.5 111 331-482 109-220 (229)
96 cd03785 GT1_MurG MurG is an N- 99.3 7.7E-10 1.7E-14 120.9 24.2 246 182-528 83-345 (350)
97 TIGR01133 murG undecaprenyldip 99.2 1.2E-09 2.6E-14 119.3 20.3 180 292-532 153-346 (348)
98 TIGR00236 wecB UDP-N-acetylglu 99.2 2.4E-09 5.3E-14 118.3 22.2 252 177-507 76-335 (365)
99 PRK13608 diacylglycerol glucos 99.2 7.7E-09 1.7E-13 115.7 25.5 270 181-545 97-376 (391)
100 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 7.9E-09 1.7E-13 113.7 23.0 249 177-508 78-339 (363)
101 TIGR02094 more_P_ylases alpha- 99.1 5.4E-08 1.2E-12 113.7 30.6 181 325-537 388-597 (601)
102 TIGR01485 SPP_plant-cyano sucr 99.0 1.4E-09 3E-14 114.1 11.2 153 585-748 1-164 (249)
103 PF13692 Glyco_trans_1_4: Glyc 99.0 2.8E-09 6.1E-14 100.1 9.8 129 326-506 2-135 (135)
104 PRK00025 lpxB lipid-A-disaccha 99.0 1E-07 2.2E-12 105.7 23.9 150 318-518 175-352 (380)
105 KOG1387 Glycosyltransferase [C 98.9 1.3E-07 2.9E-12 99.5 19.5 190 325-541 268-459 (465)
106 PRK09814 beta-1,6-galactofuran 98.9 1.8E-07 3.9E-12 102.4 21.7 239 183-524 58-315 (333)
107 PF05693 Glycogen_syn: Glycoge 98.9 3.1E-06 6.7E-11 96.5 30.7 301 193-537 146-578 (633)
108 TIGR03713 acc_sec_asp1 accesso 98.8 6E-07 1.3E-11 103.6 25.0 253 190-524 224-505 (519)
109 COG0561 Cof Predicted hydrolas 98.7 2.4E-07 5.2E-12 97.9 15.9 72 584-659 2-74 (264)
110 TIGR02471 sucr_syn_bact_C sucr 98.7 1.2E-07 2.7E-12 98.5 12.4 146 587-748 1-156 (236)
111 cd04299 GT1_Glycogen_Phosphory 98.7 2.6E-06 5.6E-11 101.7 24.2 181 327-539 479-688 (778)
112 PTZ00174 phosphomannomutase; P 98.6 8.6E-07 1.9E-11 93.0 17.1 72 584-659 4-78 (247)
113 PRK01158 phosphoglycolate phos 98.6 8E-07 1.7E-11 91.7 15.1 71 585-659 3-74 (230)
114 PLN02423 phosphomannomutase 98.6 1.2E-06 2.6E-11 91.8 15.9 71 584-659 6-79 (245)
115 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 1.8E-06 3.9E-11 90.9 13.9 71 587-661 1-72 (256)
116 TIGR00215 lpxB lipid-A-disacch 98.5 3.1E-05 6.6E-10 86.7 23.9 134 325-507 190-348 (385)
117 TIGR00099 Cof-subfamily Cof su 98.5 9.8E-07 2.1E-11 92.8 11.2 70 587-660 1-71 (256)
118 TIGR01482 SPP-subfamily Sucros 98.4 1.5E-06 3.2E-11 89.3 11.6 69 588-660 1-70 (225)
119 PLN02382 probable sucrose-phos 98.4 1.2E-06 2.5E-11 98.6 11.5 156 580-748 4-172 (413)
120 PF05116 S6PP: Sucrose-6F-phos 98.4 1.2E-06 2.5E-11 92.0 10.2 150 584-748 1-162 (247)
121 TIGR02463 MPGP_rel mannosyl-3- 98.4 2.1E-06 4.7E-11 88.1 11.9 69 587-659 1-71 (221)
122 TIGR01487 SPP-like sucrose-pho 98.4 5.7E-07 1.2E-11 92.1 7.5 71 586-660 2-73 (215)
123 PRK15126 thiamin pyrimidine py 98.4 1.9E-06 4.1E-11 91.5 11.8 70 586-659 3-73 (272)
124 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.0002 4.3E-09 78.8 27.4 301 173-525 32-404 (419)
125 PRK10530 pyridoxal phosphate ( 98.4 2E-06 4.3E-11 91.0 11.8 71 585-659 3-74 (272)
126 PF08282 Hydrolase_3: haloacid 98.4 2E-06 4.4E-11 88.8 11.3 68 588-659 1-69 (254)
127 PRK10976 putative hydrolase; P 98.4 1.4E-06 3.1E-11 92.0 9.6 70 586-659 3-73 (266)
128 PRK10513 sugar phosphate phosp 98.3 4.1E-06 8.8E-11 88.7 12.4 70 585-658 3-76 (270)
129 PRK03669 mannosyl-3-phosphogly 98.3 1.9E-06 4.2E-11 91.5 7.9 73 584-660 6-80 (271)
130 PRK14502 bifunctional mannosyl 98.3 1.7E-05 3.7E-10 92.4 16.1 74 584-661 415-489 (694)
131 PF13524 Glyco_trans_1_2: Glyc 98.2 4.4E-06 9.6E-11 73.4 8.5 87 425-535 1-91 (92)
132 PRK12702 mannosyl-3-phosphogly 98.2 8.7E-06 1.9E-10 86.0 10.4 72 585-660 1-73 (302)
133 PRK00192 mannosyl-3-phosphogly 98.1 1.4E-05 3.1E-10 84.9 10.2 71 585-659 4-75 (273)
134 TIGR02919 accessory Sec system 98.0 7.4E-05 1.6E-09 84.6 15.2 132 323-508 281-413 (438)
135 PLN02887 hydrolase family prot 98.0 3.8E-05 8.3E-10 89.5 12.5 79 576-659 300-388 (580)
136 TIGR02461 osmo_MPG_phos mannos 98.0 1.5E-05 3.2E-10 82.5 7.4 69 587-660 1-70 (225)
137 smart00775 LNS2 LNS2 domain. T 97.7 6.8E-05 1.5E-09 73.2 6.4 70 587-657 1-88 (157)
138 cd01427 HAD_like Haloacid deha 97.5 0.00012 2.6E-09 67.5 5.1 70 587-657 1-79 (139)
139 TIGR01689 EcbF-BcbF capsule bi 97.4 0.00022 4.8E-09 66.8 5.7 50 586-636 2-54 (126)
140 COG3769 Predicted hydrolase (H 97.3 0.00061 1.3E-08 68.3 7.5 72 584-660 6-79 (274)
141 TIGR01684 viral_ppase viral ph 97.0 0.0016 3.4E-08 69.1 7.1 73 584-657 125-200 (301)
142 KOG3189 Phosphomannomutase [Li 96.6 0.02 4.2E-07 56.8 10.9 164 579-747 5-189 (252)
143 PF02684 LpxB: Lipid-A-disacch 96.5 0.4 8.6E-06 53.4 21.6 250 188-509 82-343 (373)
144 KOG2941 Beta-1,4-mannosyltrans 96.5 0.12 2.6E-06 55.6 16.4 165 325-537 254-435 (444)
145 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.0039 8.5E-08 58.4 5.0 57 586-643 1-70 (132)
146 TIGR01681 HAD-SF-IIIC HAD-supe 96.3 0.0064 1.4E-07 57.1 5.5 55 586-641 1-65 (128)
147 PF08323 Glyco_transf_5: Starc 96.2 0.023 5E-07 59.5 9.8 86 178-263 118-232 (245)
148 TIGR01672 AphA HAD superfamily 96.2 0.011 2.3E-07 61.7 6.8 63 568-631 46-139 (237)
149 PHA03398 viral phosphatase sup 96.1 0.012 2.7E-07 62.5 6.9 58 584-642 127-184 (303)
150 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.9 0.0059 1.3E-07 64.5 3.2 49 586-635 2-50 (257)
151 COG0763 LpxB Lipid A disacchar 95.6 1 2.2E-05 49.7 19.3 289 167-532 69-372 (381)
152 TIGR01670 YrbI-phosphatas 3-de 95.6 0.0038 8.3E-08 60.6 0.5 55 586-643 2-65 (154)
153 TIGR01664 DNA-3'-Pase DNA 3'-p 95.5 0.021 4.6E-07 56.2 5.2 49 584-633 12-69 (166)
154 PF13439 Glyco_transf_4: Glyco 95.2 0.004 8.7E-08 59.9 -0.9 97 183-304 75-177 (177)
155 PRK11009 aphA acid phosphatase 95.1 0.048 1E-06 56.8 6.7 62 570-632 48-140 (237)
156 PRK10444 UMP phosphatase; Prov 95.0 0.016 3.6E-07 60.8 3.0 50 586-640 2-51 (248)
157 PLN02645 phosphoglycolate phos 94.8 0.02 4.4E-07 62.2 3.0 50 585-639 28-77 (311)
158 TIGR03492 conserved hypothetic 94.7 0.95 2.1E-05 50.9 16.4 140 326-507 207-365 (396)
159 PRK09484 3-deoxy-D-manno-octul 94.7 0.024 5.2E-07 56.7 3.1 59 584-643 20-85 (183)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.7 0.034 7.5E-07 58.4 4.4 52 586-642 2-56 (249)
161 TIGR01452 PGP_euk phosphoglyco 94.6 0.022 4.7E-07 60.9 2.9 44 586-634 3-46 (279)
162 COG2179 Predicted hydrolase of 94.6 0.12 2.6E-06 50.3 7.4 60 581-643 24-83 (175)
163 TIGR00213 GmhB_yaeD D,D-heptos 94.4 0.029 6.3E-07 55.5 3.0 47 586-633 2-53 (176)
164 PF03332 PMM: Eukaryotic phosp 94.1 0.23 4.9E-06 50.7 8.6 137 610-748 1-159 (220)
165 TIGR01656 Histidinol-ppas hist 94.1 0.037 8E-07 53.2 3.0 46 586-632 1-53 (147)
166 KOG1050 Trehalose-6-phosphate 94.1 0.0035 7.6E-08 74.7 -5.2 170 571-747 175-377 (732)
167 PHA02530 pseT polynucleotide k 94.0 0.11 2.3E-06 56.0 6.6 57 584-641 157-222 (300)
168 TIGR01668 YqeG_hyp_ppase HAD s 93.6 0.15 3.2E-06 50.3 6.2 55 583-640 23-78 (170)
169 PRK06769 hypothetical protein; 93.3 0.066 1.4E-06 53.0 3.2 48 585-633 4-55 (173)
170 PF02350 Epimerase_2: UDP-N-ac 93.3 16 0.00034 40.4 24.1 254 176-506 56-318 (346)
171 TIGR03568 NeuC_NnaA UDP-N-acet 93.2 5.9 0.00013 44.1 18.8 72 404-505 264-338 (365)
172 PF13844 Glyco_transf_41: Glyc 93.1 1.7 3.6E-05 49.8 14.3 107 320-447 276-385 (468)
173 PF08645 PNK3P: Polynucleotide 92.8 0.099 2.1E-06 51.1 3.5 44 586-630 1-53 (159)
174 TIGR01261 hisB_Nterm histidino 92.7 0.089 1.9E-06 51.5 3.0 46 585-631 1-54 (161)
175 PRK05446 imidazole glycerol-ph 92.5 0.13 2.9E-06 56.7 4.5 47 584-631 1-55 (354)
176 PF13344 Hydrolase_6: Haloacid 92.5 0.049 1.1E-06 49.0 0.9 43 588-635 1-43 (101)
177 PF09419 PGP_phosphatase: Mito 92.3 0.24 5.2E-06 48.8 5.5 62 567-632 25-87 (168)
178 TIGR01533 lipo_e_P4 5'-nucleot 92.3 0.11 2.4E-06 55.1 3.3 53 583-636 73-148 (266)
179 TIGR01663 PNK-3'Pase polynucle 92.1 0.18 3.9E-06 58.5 5.1 50 583-633 166-224 (526)
180 TIGR01675 plant-AP plant acid 92.0 0.27 5.9E-06 50.9 5.8 51 584-635 76-149 (229)
181 COG1778 Low specificity phosph 91.9 0.25 5.4E-06 47.6 4.9 57 583-643 6-72 (170)
182 PRK09552 mtnX 2-hydroxy-3-keto 91.9 0.25 5.5E-06 50.6 5.4 36 606-642 75-110 (219)
183 TIGR01680 Veg_Stor_Prot vegeta 91.8 0.23 5.1E-06 52.4 5.1 75 584-659 100-198 (275)
184 PRK08942 D,D-heptose 1,7-bisph 91.6 0.13 2.8E-06 51.1 2.8 47 585-632 3-55 (181)
185 TIGR00338 serB phosphoserine p 90.7 0.32 7E-06 49.5 4.8 36 606-642 86-121 (219)
186 PF13579 Glyco_trans_4_4: Glyc 90.6 0.43 9.4E-06 44.7 5.3 68 191-263 74-146 (160)
187 PLN02954 phosphoserine phospha 90.4 0.31 6.7E-06 49.8 4.4 36 606-642 85-120 (224)
188 PTZ00445 p36-lilke protein; Pr 90.4 0.51 1.1E-05 48.0 5.6 62 572-634 30-103 (219)
189 PRK13582 thrH phosphoserine ph 90.4 0.27 5.9E-06 49.4 3.9 34 607-642 70-103 (205)
190 COG0381 WecB UDP-N-acetylgluco 90.3 23 0.0005 39.4 18.7 136 326-508 205-343 (383)
191 TIGR01491 HAD-SF-IB-PSPlk HAD- 89.9 0.61 1.3E-05 46.5 6.0 35 607-642 82-116 (201)
192 TIGR03333 salvage_mtnX 2-hydro 89.3 0.65 1.4E-05 47.4 5.7 36 606-642 71-106 (214)
193 TIGR01686 FkbH FkbH-like domai 89.2 0.75 1.6E-05 50.2 6.4 58 584-642 2-67 (320)
194 PRK11133 serB phosphoserine ph 89.2 0.35 7.5E-06 52.9 3.8 35 606-641 182-216 (322)
195 smart00577 CPDc catalytic doma 88.9 0.68 1.5E-05 44.5 5.2 58 584-643 1-81 (148)
196 PF07429 Glyco_transf_56: 4-al 88.7 8.1 0.00018 42.3 13.5 134 333-504 192-331 (360)
197 TIGR01488 HAD-SF-IB Haloacid D 88.7 0.62 1.3E-05 45.5 4.8 35 607-642 75-109 (177)
198 TIGR01459 HAD-SF-IIA-hyp4 HAD- 88.4 0.6 1.3E-05 48.7 4.7 46 585-635 8-53 (242)
199 TIGR01685 MDP-1 magnesium-depe 88.1 0.69 1.5E-05 45.9 4.7 57 585-642 2-82 (174)
200 TIGR03590 PseG pseudaminic aci 88.0 4.8 0.0001 43.0 11.5 92 325-447 170-261 (279)
201 TIGR01489 DKMTPPase-SF 2,3-dik 87.7 1 2.2E-05 44.3 5.8 36 606-642 73-108 (188)
202 cd04300 GT1_Glycogen_Phosphory 87.3 34 0.00074 41.8 19.0 136 325-482 529-668 (797)
203 TIGR02726 phenyl_P_delta pheny 87.3 0.44 9.6E-06 47.1 2.8 58 585-643 7-71 (169)
204 TIGR01460 HAD-SF-IIA Haloacid 87.1 0.76 1.6E-05 47.8 4.6 50 588-642 1-53 (236)
205 PRK13225 phosphoglycolate phos 86.9 0.89 1.9E-05 48.5 5.0 37 606-643 143-179 (273)
206 TIGR01426 MGT glycosyltransfer 86.7 18 0.00038 40.3 15.6 97 407-533 279-385 (392)
207 PRK13288 pyrophosphatase PpaX; 86.1 0.79 1.7E-05 46.5 4.0 35 607-642 84-118 (214)
208 PF03767 Acid_phosphat_B: HAD 85.9 0.094 2E-06 54.5 -3.0 115 583-715 70-207 (229)
209 COG0707 MurG UDP-N-acetylgluco 85.3 36 0.00078 37.8 16.8 83 413-522 243-338 (357)
210 PF06941 NT5C: 5' nucleotidase 85.1 0.38 8.3E-06 48.2 1.1 38 605-643 73-121 (191)
211 PRK14986 glycogen phosphorylas 84.9 19 0.00041 44.0 15.2 136 325-482 542-681 (815)
212 PRK10826 2-deoxyglucose-6-phos 83.8 1.4 3.1E-05 44.9 4.7 34 608-642 95-128 (222)
213 PF06888 Put_Phosphatase: Puta 82.7 1.6 3.5E-05 45.5 4.5 37 606-642 72-109 (234)
214 KOG3742 Glycogen synthase [Car 82.0 32 0.0007 38.7 14.1 34 414-447 492-525 (692)
215 PF06258 Mito_fiss_Elm1: Mitoc 81.2 15 0.00032 40.0 11.5 108 317-447 135-250 (311)
216 PF08235 LNS2: LNS2 (Lipin/Ned 80.9 2.2 4.7E-05 41.6 4.4 54 587-641 1-65 (157)
217 COG0637 Predicted phosphatase/ 80.1 2.1 4.5E-05 44.1 4.3 36 606-642 87-122 (221)
218 COG0546 Gph Predicted phosphat 79.8 2.4 5.2E-05 43.5 4.6 36 606-642 90-125 (220)
219 KOG3120 Predicted haloacid deh 79.2 3.5 7.5E-05 42.1 5.3 61 582-642 10-121 (256)
220 COG0560 SerB Phosphoserine pho 79.2 1.5 3.3E-05 44.9 2.9 33 606-639 78-110 (212)
221 cd03784 GT1_Gtf_like This fami 79.2 1.1E+02 0.0024 33.9 22.7 71 407-505 292-371 (401)
222 PF12689 Acid_PPase: Acid Phos 78.9 2.8 6E-05 41.4 4.5 56 585-641 3-81 (169)
223 TIGR02245 HAD_IIID1 HAD-superf 78.4 3.6 7.8E-05 41.6 5.2 58 582-641 18-79 (195)
224 PF03031 NIF: NLI interacting 78.1 1.8 4E-05 41.7 3.0 55 586-642 1-71 (159)
225 PLN02940 riboflavin kinase 77.0 2.7 5.9E-05 47.1 4.4 33 608-641 96-128 (382)
226 TIGR01456 CECR5 HAD-superfamil 76.8 4.1 9E-05 44.4 5.6 46 587-636 2-53 (321)
227 COG0816 Predicted endonuclease 76.6 13 0.00028 35.6 8.2 72 343-424 40-111 (141)
228 COG3914 Spy Predicted O-linked 75.2 34 0.00074 39.9 12.3 102 327-447 431-532 (620)
229 TIGR02250 FCP1_euk FCP1-like p 74.5 4.1 8.8E-05 39.7 4.3 60 582-643 3-94 (156)
230 COG0647 NagD Predicted sugar p 73.8 4.1 8.8E-05 43.4 4.4 44 585-633 8-51 (269)
231 TIGR02251 HIF-SF_euk Dullard-l 73.5 5.7 0.00012 38.8 5.1 57 585-643 1-78 (162)
232 PF00343 Phosphorylase: Carboh 72.5 1.6E+02 0.0035 35.7 17.5 133 325-482 443-582 (713)
233 COG0241 HisB Histidinol phosph 71.9 3.9 8.5E-05 40.8 3.5 45 585-630 5-55 (181)
234 PRK11590 hypothetical protein; 71.6 2.1 4.6E-05 43.5 1.7 34 608-642 98-132 (211)
235 PRK08238 hypothetical protein; 70.8 8.9 0.00019 44.3 6.6 36 607-643 74-109 (479)
236 COG4359 Uncharacterized conser 68.3 8 0.00017 38.5 4.6 34 608-642 76-109 (220)
237 PRK02797 4-alpha-L-fucosyltran 67.9 39 0.00085 36.7 10.1 98 326-440 146-245 (322)
238 PRK01021 lpxB lipid-A-disaccha 66.4 2.9E+02 0.0062 33.0 21.9 28 416-448 482-509 (608)
239 PF12000 Glyco_trans_4_3: Gkyc 65.0 42 0.00091 33.3 9.1 50 168-219 42-93 (171)
240 COG3882 FkbH Predicted enzyme 64.7 19 0.00041 41.1 7.2 84 572-656 209-305 (574)
241 COG4641 Uncharacterized protei 64.2 34 0.00075 37.9 9.0 115 404-540 239-361 (373)
242 PLN02779 haloacid dehalogenase 62.6 4 8.7E-05 43.8 1.6 29 572-600 27-55 (286)
243 COG0058 GlgP Glucan phosphoryl 62.2 45 0.00097 40.4 10.2 130 325-482 486-616 (750)
244 TIGR02009 PGMB-YQAB-SF beta-ph 62.1 4.1 9E-05 39.9 1.5 14 586-599 2-15 (185)
245 PRK10725 fructose-1-P/6-phosph 62.1 4.5 9.7E-05 39.9 1.7 15 585-599 5-19 (188)
246 TIGR01990 bPGM beta-phosphoglu 60.8 6.6 0.00014 38.4 2.7 26 587-619 1-26 (185)
247 TIGR01548 HAD-SF-IA-hyp1 haloa 58.9 6.1 0.00013 39.5 2.1 26 587-619 2-27 (197)
248 TIGR01545 YfhB_g-proteo haloac 57.5 6.3 0.00014 40.3 1.9 33 607-640 96-129 (210)
249 PHA02597 30.2 hypothetical pro 57.3 5 0.00011 40.1 1.1 15 586-600 3-17 (197)
250 PRK14089 ipid-A-disaccharide s 56.9 3.1E+02 0.0067 30.4 19.8 84 328-447 171-255 (347)
251 TIGR02253 CTE7 HAD superfamily 56.6 8.3 0.00018 39.0 2.7 15 586-600 3-17 (221)
252 PF05152 DUF705: Protein of un 56.4 27 0.00059 37.2 6.3 56 584-640 121-176 (297)
253 TIGR01993 Pyr-5-nucltdase pyri 55.8 6.3 0.00014 38.8 1.6 14 587-600 2-15 (184)
254 PRK14988 GMP/IMP nucleotidase; 55.1 6.2 0.00013 40.6 1.4 34 607-641 95-128 (224)
255 PRK10748 flavin mononucleotide 55.1 6.6 0.00014 40.7 1.6 15 585-599 10-24 (238)
256 TIGR02252 DREG-2 REG-2-like, H 55.1 5.4 0.00012 39.9 0.9 15 586-600 1-15 (203)
257 TIGR01493 HAD-SF-IA-v2 Haloaci 54.6 8.6 0.00019 37.4 2.3 14 587-600 1-14 (175)
258 PRK11587 putative phosphatase; 54.5 6.6 0.00014 40.0 1.5 32 608-640 86-117 (218)
259 PRK13223 phosphoglycolate phos 53.0 10 0.00022 40.3 2.7 14 586-599 14-27 (272)
260 PRK12446 undecaprenyldiphospho 52.6 3.6E+02 0.0077 29.7 17.2 69 414-507 244-326 (352)
261 TIGR02254 YjjG/YfnB HAD superf 52.1 7.5 0.00016 39.3 1.4 15 586-600 2-16 (224)
262 TIGR01422 phosphonatase phosph 51.6 8 0.00017 40.3 1.6 15 584-598 1-15 (253)
263 PRK13478 phosphonoacetaldehyde 51.1 8.1 0.00018 40.7 1.6 13 586-598 5-17 (267)
264 PRK13222 phosphoglycolate phos 50.6 7.8 0.00017 39.3 1.3 13 586-598 7-19 (226)
265 KOG2884 26S proteasome regulat 50.6 2.5E+02 0.0055 28.9 11.7 46 469-518 187-237 (259)
266 PRK13226 phosphoglycolate phos 50.4 7.9 0.00017 39.8 1.3 34 607-641 97-130 (229)
267 COG1819 Glycosyl transferases, 50.3 2.1E+02 0.0045 32.4 12.8 98 408-537 289-397 (406)
268 PLN03243 haloacid dehalogenase 49.9 8.4 0.00018 40.8 1.4 13 586-598 25-37 (260)
269 PLN02770 haloacid dehalogenase 49.8 9.4 0.0002 39.9 1.8 16 583-598 20-35 (248)
270 PRK10563 6-phosphogluconate ph 48.8 9.5 0.00021 38.7 1.6 16 585-600 4-19 (221)
271 TIGR01525 ATPase-IB_hvy heavy 48.7 20 0.00044 42.2 4.5 65 578-643 357-422 (556)
272 PF13477 Glyco_trans_4_2: Glyc 48.7 28 0.00061 32.1 4.7 40 182-223 68-108 (139)
273 TIGR01549 HAD-SF-IA-v1 haloaci 48.7 8.1 0.00018 36.7 1.0 12 587-598 1-12 (154)
274 TIGR03351 PhnX-like phosphonat 48.3 8.7 0.00019 38.9 1.2 13 586-598 2-14 (220)
275 PRK09449 dUMP phosphatase; Pro 47.6 9.5 0.00021 38.8 1.4 13 586-598 4-16 (224)
276 PF09949 DUF2183: Uncharacteri 46.7 46 0.001 29.9 5.4 29 342-374 49-77 (100)
277 COG3660 Predicted nucleoside-d 46.4 2.5E+02 0.0054 30.0 11.3 31 192-222 72-102 (329)
278 TIGR01428 HAD_type_II 2-haloal 44.5 12 0.00025 37.3 1.5 13 586-598 2-14 (198)
279 PRK13587 1-(5-phosphoribosyl)- 43.8 70 0.0015 33.3 7.1 60 571-641 148-212 (234)
280 TIGR02137 HSK-PSP phosphoserin 43.5 11 0.00024 38.3 1.1 36 605-642 68-103 (203)
281 PF13528 Glyco_trans_1_3: Glyc 43.5 1.4E+02 0.003 31.8 9.8 81 324-447 191-271 (318)
282 PF12710 HAD: haloacid dehalog 43.4 11 0.00024 36.9 1.1 28 612-640 96-123 (192)
283 COG4822 CbiK Cobalamin biosynt 42.6 4E+02 0.0087 27.5 13.5 115 225-371 33-147 (265)
284 TIGR02247 HAD-1A3-hyp Epoxide 42.6 13 0.00027 37.5 1.4 14 586-599 3-16 (211)
285 TIGR01454 AHBA_synth_RP 3-amin 42.5 10 0.00022 38.0 0.7 35 607-642 77-111 (205)
286 TIGR01490 HAD-SF-IB-hyp1 HAD-s 42.0 13 0.00028 37.0 1.4 15 587-601 1-15 (202)
287 TIGR01511 ATPase-IB1_Cu copper 41.6 31 0.00068 40.8 4.6 61 582-643 382-442 (562)
288 TIGR01449 PGP_bact 2-phosphogl 41.3 11 0.00024 37.8 0.7 11 588-598 1-11 (213)
289 TIGR00250 RNAse_H_YqgF RNAse H 41.3 1.3E+02 0.0029 28.2 7.9 71 343-423 35-105 (130)
290 PF10933 DUF2827: Protein of u 39.9 3.1E+02 0.0068 30.4 11.4 157 325-524 189-347 (364)
291 TIGR01509 HAD-SF-IA-v3 haloaci 38.5 13 0.00028 36.1 0.7 13 587-599 1-13 (183)
292 COG3700 AphA Acid phosphatase 37.6 47 0.001 33.0 4.3 70 568-637 46-145 (237)
293 COG1011 Predicted hydrolase (H 36.9 20 0.00043 36.3 1.8 46 606-653 100-151 (229)
294 TIGR00661 MJ1255 conserved hyp 36.8 59 0.0013 35.1 5.6 68 414-507 239-315 (321)
295 PRK09456 ?-D-glucose-1-phospha 36.7 19 0.00041 36.0 1.6 15 586-600 1-15 (199)
296 PRK04128 1-(5-phosphoribosyl)- 36.4 81 0.0018 32.7 6.2 61 572-641 31-93 (228)
297 PRK11033 zntA zinc/cadmium/mer 35.6 51 0.0011 40.4 5.3 66 577-643 540-605 (741)
298 KOG2134 Polynucleotide kinase 34.9 29 0.00063 38.5 2.7 82 583-665 73-177 (422)
299 PRK00109 Holliday junction res 34.6 2E+02 0.0044 27.3 8.1 69 345-423 43-111 (138)
300 PF13419 HAD_2: Haloacid dehal 34.4 15 0.00033 34.8 0.4 36 606-642 78-113 (176)
301 KOG0331 ATP-dependent RNA heli 31.7 2.3E+02 0.0049 33.2 9.2 93 328-432 130-225 (519)
302 PF06437 ISN1: IMP-specific 5' 31.4 70 0.0015 35.6 4.9 69 565-635 123-195 (408)
303 TIGR01497 kdpB K+-transporting 31.2 57 0.0012 39.4 4.6 69 574-643 415-483 (675)
304 PLN02575 haloacid dehalogenase 30.7 23 0.0005 39.7 1.1 13 586-598 132-144 (381)
305 PRK10422 lipopolysaccharide co 30.6 5.2E+02 0.011 28.2 11.9 88 324-430 182-270 (352)
306 PHA03392 egt ecdysteroid UDP-g 30.3 9.3E+02 0.02 28.1 15.4 102 407-535 350-465 (507)
307 PF06189 5-nucleotidase: 5'-nu 30.0 82 0.0018 33.3 4.9 52 584-635 120-199 (264)
308 COG4996 Predicted phosphatase 29.9 84 0.0018 29.8 4.4 49 586-635 1-70 (164)
309 KOG2882 p-Nitrophenyl phosphat 29.8 43 0.00094 36.0 2.9 51 586-641 23-73 (306)
310 PF11019 DUF2608: Protein of u 28.7 1.2E+02 0.0025 32.0 6.0 62 573-635 7-110 (252)
311 PRK12581 oxaloacetate decarbox 28.5 9.8E+02 0.021 27.7 17.2 106 324-445 144-256 (468)
312 COG2503 Predicted secreted aci 28.2 73 0.0016 33.3 4.1 53 582-635 76-151 (274)
313 TIGR02093 P_ylase glycogen/sta 27.9 4.7E+02 0.01 32.3 11.4 136 325-482 526-665 (794)
314 PRK06698 bifunctional 5'-methy 26.7 25 0.00055 40.3 0.6 13 586-598 242-254 (459)
315 PRK14985 maltodextrin phosphor 26.3 4.9E+02 0.011 32.2 11.1 136 325-482 528-667 (798)
316 COG2248 Predicted hydrolase (m 25.9 8.2E+02 0.018 26.0 12.6 37 324-371 174-211 (304)
317 KOG1615 Phosphoserine phosphat 25.5 68 0.0015 32.5 3.2 30 606-636 89-118 (227)
318 KOG1618 Predicted phosphatase 23.9 69 0.0015 34.8 3.1 42 584-629 34-78 (389)
319 cd07018 S49_SppA_67K_type Sign 23.9 1.1E+02 0.0023 31.5 4.5 46 588-633 1-57 (222)
320 PF05159 Capsule_synth: Capsul 23.1 6.2E+02 0.013 26.4 10.4 96 325-447 116-219 (269)
321 PF00702 Hydrolase: haloacid d 22.8 42 0.00092 33.3 1.3 12 586-597 2-13 (215)
322 PF04464 Glyphos_transf: CDP-G 22.6 1E+03 0.022 25.9 16.9 234 194-508 81-338 (369)
323 COG3980 spsG Spore coat polysa 22.6 7.2E+02 0.016 26.9 10.2 90 325-447 158-247 (318)
324 PLN03007 UDP-glucosyltransfera 22.5 1.2E+03 0.026 26.8 14.3 112 407-539 349-479 (482)
325 PRK13396 3-deoxy-7-phosphohept 22.5 1.1E+03 0.024 26.2 13.4 52 387-445 155-206 (352)
326 PF15024 Glyco_transf_18: Glyc 22.3 2.5E+02 0.0055 33.0 7.4 96 408-507 327-431 (559)
327 TIGR01512 ATPase-IB2_Cd heavy 22.0 81 0.0018 37.0 3.6 61 582-643 339-400 (536)
328 COG0373 HemA Glutamyl-tRNA red 21.9 1E+03 0.022 27.1 12.0 35 410-445 226-260 (414)
329 TIGR00734 hisAF_rel hisA/hisF 21.8 2.7E+02 0.0058 28.6 7.0 45 586-641 156-204 (221)
330 PRK14042 pyruvate carboxylase 21.6 1.4E+03 0.031 27.3 16.2 94 336-445 148-247 (596)
331 PF13419 HAD_2: Haloacid dehal 21.5 73 0.0016 30.0 2.6 36 570-618 79-115 (176)
332 cd04723 HisA_HisF Phosphoribos 20.9 2.8E+02 0.006 28.7 6.9 59 571-640 146-208 (233)
333 TIGR01691 enolase-ppase 2,3-di 20.9 51 0.0011 34.0 1.5 32 586-617 2-33 (220)
334 PRK10671 copA copper exporting 20.9 1.2E+02 0.0027 37.6 5.1 66 576-642 621-686 (834)
335 KOG2670 Enolase [Carbohydrate 20.5 70 0.0015 34.7 2.3 39 128-176 272-310 (433)
336 TIGR01454 AHBA_synth_RP 3-amin 20.5 93 0.002 31.0 3.3 20 571-590 78-98 (205)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=6.3e-176 Score=1553.52 Aligned_cols=745 Identities=66% Similarity=1.147 Sum_probs=703.0
Q ss_pred ccccccccccc--cCCCCcc-CCCCcccccccccccccccC-CCCC---CCCCCCCCcEEEEEcCCccceeEeCCC-Cce
Q 004512 2 RSSLDLLNLIS--FDDFGTL-NRIPGVMKVPGVISEFENKS-NDGT---TTIVEPCQRRIIVANQLPVKAYYEKDS-NKW 73 (748)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~rliivsnrlP~~~~~~~~~-~~~ 73 (748)
|||+|||||++ +..++++ |++|++|++||+++++++++ ++.+ +++..+.+|+||||||||+.++++++| ++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~~~~ 83 (854)
T PLN02205 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGW 83 (854)
T ss_pred hhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCCcce
Confidence 79999999999 6677776 99999999999999999876 3222 346677789999999999999987554 589
Q ss_pred EEEecCCchhHhhhhcCCC-CCceEEEeccCcccCCcchhhHHHhhhcCeEEEEEecChhhhhhhhhccccccccccccc
Q 004512 74 GFEYDQDSLYLQLKDGFPL-ETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHY 152 (748)
Q Consensus 74 ~~~~~~~~l~~~l~~~l~~-~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~y~gf~~~~LWpl~H~ 152 (748)
+|++++|||+++|++++.. ..+++||||+|.++++++|+++.+.++++|+|+|||++++++++||+||||++|||+|||
T Consensus 84 ~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~ 163 (854)
T PLN02205 84 IFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHY 163 (854)
T ss_pred EEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhcc
Confidence 9999999999999988864 378999999998888888888878888899999999999999999999999999999999
Q ss_pred CCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhh
Q 004512 153 MLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232 (748)
Q Consensus 153 ~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr 232 (748)
+++..|+++.+|++++|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|+||
T Consensus 164 ~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 164 MLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 98887777779999999999999999999999999986799999999999999999999999999999999999999999
Q ss_pred cCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchh
Q 004512 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (748)
Q Consensus 233 ~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~ 312 (748)
+||+|++||+|||+||+|||||++|++||++||+|++|+++..++|.+++.|+||+++|+++|+|||++.|...+..|++
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004512 313 GQKVKELKEKFD--GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (748)
Q Consensus 313 ~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 390 (748)
.+++++++++++ |+++|+||||+|++|||.+||+||++||++||+|+||++||||++|+|+++++|++++++++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 999999999995 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceE
Q 004512 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (748)
Q Consensus 391 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (748)
+||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+||+++++.++.+++.++.+ +++|+|
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~--~~~gvL 481 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST--PKKSML 481 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc--CCCCce
Confidence 999999999999999999999999999999999999999999999999999999999877777666665543 568999
Q ss_pred EEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcccccc
Q 004512 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDHLFKRC 550 (748)
Q Consensus 471 V~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~~~~~~ 550 (748)
|+|||+||+++|+||++|||||++++|+||.+||+||.+||+.||++++++|++||+.+|+++|+++|+++|+++..++|
T Consensus 482 iLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~ 561 (854)
T PLN02205 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRC 561 (854)
T ss_pred EeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cccCCCcceeEeecCcccccCChHHHHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004512 551 WGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (748)
Q Consensus 551 ~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (748)
|++|+|++||+++++++|++|+++.++++|+++++|+|||||||||+|+.+....|+++++++|++||++++|.|+|+||
T Consensus 562 ~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG 641 (854)
T PLN02205 562 WGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA 641 (854)
T ss_pred cccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred CChhhHhhhhcCCCCceeeecCceEEeecCCCcceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCC
Q 004512 631 RGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710 (748)
Q Consensus 631 R~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~ad 710 (748)
|++++|++||+++++++++||||++++++++..|+...+..+..|++.+.++++.|++++||++||.|+++++||||++|
T Consensus 642 R~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~ad 721 (854)
T PLN02205 642 RSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721 (854)
T ss_pred CCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCC
Confidence 99999999999988899999999999998777897654445678999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHhhhcCCCeEEeeCCeEEEEecC
Q 004512 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748 (748)
Q Consensus 711 pe~g~~qa~el~~~l~~~~~~~~v~v~~Gk~vvEvrP~ 748 (748)
|+++.+||+++.+++++.+.+.++.|..|+++|||+|+
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~ 759 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeC
Confidence 99999999999999999999889999999999999995
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.7e-155 Score=1367.02 Aligned_cols=656 Identities=37% Similarity=0.673 Sum_probs=601.0
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCc-chhhHHHhhhcCeEEEEEe
Q 004512 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTF 128 (748)
Q Consensus 50 ~~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~l~~~~~~~pv~ 128 (748)
++||||||||||+.++++++ |+|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+.+ .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 78999999999999988654 589999999999999975 5 568999999999876654 4554544 45789999999
Q ss_pred cChhhhhhhhhcccccccccccccCC-CCCC-CCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHH
Q 004512 129 LPADVHKKYYHGFCKHYLWPLFHYML-PLTA-SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (748)
Q Consensus 129 l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~ 206 (748)
|+++++++||+||||++|||+|||+. +..+ ....+|++++|++|++||++||++|++.+++ +|+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 0124688899999999999999999999987 5999999999999999
Q ss_pred HHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecC
Q 004512 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (748)
Q Consensus 207 ~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~g 286 (748)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999988543 3588999
Q ss_pred eEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 287 r~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
|.++|.++|+|||++.|...+..+++.+++++++++++|+++|+||||||+.|||.+||+||++||++||+|++||+|||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
|+.|+|+++++|++++.++.++|++||++||+.+|+||+|+.+.++++|+.+||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhC
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 525 (748)
. .++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 484 ~-----------------~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~ 546 (934)
T PLN03064 484 D-----------------SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546 (934)
T ss_pred c-----------------CCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 7 357899999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCcccccCChHHHHHHhhccCceEEEecCCCCCCCCCC--C-
Q 004512 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS--E- 602 (748)
Q Consensus 526 ~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~--~- 602 (748)
|+++|+++|+++|.++...+.. ++. . -+.+|+.+.++++|+++++|+|||||||||+|+.+ .
T Consensus 547 d~~~Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~ 611 (934)
T PLN03064 547 TAQEWAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGR 611 (934)
T ss_pred CHHHHHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccc
Confidence 9999999999999988654321 110 1 12379999999999999999999999999999874 2
Q ss_pred --------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCccee-cccCCCc
Q 004512 603 --------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI-CSLTRDF 673 (748)
Q Consensus 603 --------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~-~~~~~~~ 673 (748)
.+.|+++++++|++||++|+|+|+|||||++++|++||+++ +++|+||||+|++.++ ..|+. +.+..+.
T Consensus 612 ~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~ 689 (934)
T PLN03064 612 RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNM 689 (934)
T ss_pred ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-Ccceeccccccch
Confidence 55789999999999999999999999999999999999987 7999999999999874 47973 3334467
Q ss_pred chHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHH-HhhhcCCCeEEeeCCeEEEEecC
Q 004512 674 DWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQ 748 (748)
Q Consensus 674 ~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l-~~~~~~~~v~v~~Gk~vvEvrP~ 748 (748)
+|++.+.++|+.|+++|||++||.|+++++||||+||||+|..||++++++| +..+.+.+++|+.||+||||||.
T Consensus 690 ~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~ 765 (934)
T PLN03064 690 DWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV 765 (934)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC
Confidence 8999999999999999999999999999999999999999999999999999 55667889999999999999995
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.7e-146 Score=1303.16 Aligned_cols=658 Identities=37% Similarity=0.673 Sum_probs=595.3
Q ss_pred CCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcchhhHHHhhhcCeEEEEE
Q 004512 48 EPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPT 127 (748)
Q Consensus 48 ~~~~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 127 (748)
...+||||||||||+.+.++++ |+|++++++|||+++|.+ +. ..+++||||+|.+++++++.......+.+|+|+||
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv 84 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPV 84 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEe
Confidence 4678999999999999887643 689999999999999976 44 57999999999876554332232344678999999
Q ss_pred ecChhhhhhhhhcccccccccccccCC-CCCCC-CCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHH
Q 004512 128 FLPADVHKKYYHGFCKHYLWPLFHYML-PLTAS-HGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLP 205 (748)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp 205 (748)
|| ++++++||+||||++|||+|||+. +..+. ...+|.++.|++|++||++||++|++.+++ +|+|||||||||+||
T Consensus 85 ~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~llp 162 (797)
T PLN03063 85 FL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFLP 162 (797)
T ss_pred eh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhHH
Confidence 99 999999999999999999999982 22221 113566789999999999999999999987 599999999999999
Q ss_pred HHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEec
Q 004512 206 SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYF 285 (748)
Q Consensus 206 ~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~ 285 (748)
+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+|++|+++... .+.++
T Consensus 163 ~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~~ 238 (797)
T PLN03063 163 QYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQ 238 (797)
T ss_pred HHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999875432 47799
Q ss_pred CeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEE
Q 004512 286 GRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (748)
Q Consensus 286 gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 365 (748)
|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||+|+.|||.++|+||++||++||+++++++||
T Consensus 239 gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLv 318 (797)
T PLN03063 239 GKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLV 318 (797)
T ss_pred CeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEE
Confidence 99999999999999999988776677777777889999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhh
Q 004512 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (748)
Q Consensus 366 qi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~ 445 (748)
||++|+|+++++|+++++++++++++||.+||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||
T Consensus 319 qia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~ 398 (797)
T PLN03063 319 QIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVAC 398 (797)
T ss_pred EEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 004512 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (748)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 524 (748)
|++ ++|++|+|||+|++++++ +|++|||||++++|+||.++|+|+++||+.|+++++++|++
T Consensus 399 g~p-----------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 399 QKA-----------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred ecC-----------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhh
Confidence 873 468999999999999994 89999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCcccccCChHHHHHHhhccCceEEEecCCCCCCCCCC---
Q 004512 525 HDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS--- 601 (748)
Q Consensus 525 ~~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~--- 601 (748)
||+.+|+++|+++|+++++.+..+. ...+.+|+.+.++++|+++++|+|||||||||+|+.+
T Consensus 462 ~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~ 526 (797)
T PLN03063 462 HSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI 526 (797)
T ss_pred CCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc
Confidence 9999999999999999887542210 1234479999999999999999999999999999864
Q ss_pred --CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCcceecc-cCCCcchHHH
Q 004512 602 --EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICS-LTRDFDWKEI 678 (748)
Q Consensus 602 --~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~~~-~~~~~~w~~~ 678 (748)
..+.|+++++++|++|+++|+|+|+|||||++++|++||+++ +++++||||+|++.++ ..|.... +..+.+|++.
T Consensus 527 ~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~~-~~w~~~~~~~~~~~w~~~ 604 (797)
T PLN03063 527 KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHTS-GEWVTTMPEHMNLDWVDG 604 (797)
T ss_pred ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecCC-CceeeccccccChhHHHH
Confidence 457799999999999999999999999999999999999985 7999999999999764 4797532 2346789999
Q ss_pred HHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHH-HhhhcCCCeEEeeCCeEEEEecC
Q 004512 679 AEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQ 748 (748)
Q Consensus 679 v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l-~~~~~~~~v~v~~Gk~vvEvrP~ 748 (748)
+.++|+.|++++||++||.|+++++||||+|||++|..||++++++| +.++.+.+++|++||+||||||+
T Consensus 605 v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~ 675 (797)
T PLN03063 605 VKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAI 675 (797)
T ss_pred HHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcC
Confidence 99999999999999999999999999999999999999999999999 44667788999999999999995
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=9.1e-133 Score=1187.19 Aligned_cols=649 Identities=36% Similarity=0.665 Sum_probs=594.0
Q ss_pred CcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCC---cchhhHHHhhhcCeEEEEE
Q 004512 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV---DDQEEVSTILLEKFKCVPT 127 (748)
Q Consensus 51 ~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~---~~~~~~~~~l~~~~~~~pv 127 (748)
+||||||||||+.+++++ ++|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988754 379999999999999987555 5789999999976543 2223333 45678999999
Q ss_pred ecChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHH
Q 004512 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (748)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (748)
|+++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHH
Confidence 99999999999999999999999999776 5799999999999999999999999997 49999999999999999
Q ss_pred HHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCe
Q 004512 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (748)
Q Consensus 208 lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr 287 (748)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||.+++++++.. ..+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999987543 25789999
Q ss_pred EEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEE
Q 004512 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (748)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 367 (748)
.++|.++|+|||++.|.+....+++.+..++++++++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887777777777888888899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 368 ~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
+.|+|.+.++|+++++++.+++++||++||+.+|.||+++.+.++++|+.++|++||||++||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998777999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCH
Q 004512 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (748)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 527 (748)
+ ++|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|+++++++|.+||+
T Consensus 387 ~-----------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~ 449 (726)
T PRK14501 387 D-----------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449 (726)
T ss_pred C-----------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3 36899999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCcccccCChHHHHHHhhccCceEEEecCCCCCCCCC--CCCCC
Q 004512 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKR 605 (748)
Q Consensus 528 ~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~--~~~~~ 605 (748)
..|+++|++++.++++.+.... ...++.++.+.+.++|+.+++|+|++||||||++.. +..+.
T Consensus 450 ~~w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 450 HKWASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAV 514 (726)
T ss_pred HHHHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCC
Confidence 9999999999999877653210 123557899999999999999999999999999975 34567
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCcceecccCCCcchHHHHHHHHHH
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~~~~~~~~~w~~~v~~vl~~ 685 (748)
|+++++++|++|++++++.|+|+|||++..++++|+.+ +++++||||++++.++ ..|.... ..+..|++.+.++++.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~-~~~~~w~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLE-PVATEWKDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECC-CcchhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999886 5899999999998764 4787643 2467899999999999
Q ss_pred HhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCCCeEEeeCCeEEEEecC
Q 004512 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748 (748)
Q Consensus 686 ~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~v~v~~Gk~vvEvrP~ 748 (748)
+.+++||+++|+|+++++||||++||+++..|++++.++|++++.+.++.++.|++++||+|+
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~ 654 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA 654 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEEC
Confidence 999999999999999999999999999999999999999999888889999999999999995
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-125 Score=1085.80 Aligned_cols=651 Identities=53% Similarity=0.917 Sum_probs=616.0
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcchhhHHHhhhcCeEEEEEec
Q 004512 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (748)
Q Consensus 50 ~~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l 129 (748)
..|+|+|||+||+.+.+..+++.|.|+++.+|++.++.+++. .++..||||.+.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999666666799999999999999987666 6889999999988888999999999999999999999
Q ss_pred ChhhhhhhhhcccccccccccccC-CCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHH
Q 004512 130 PADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFL 208 (748)
Q Consensus 130 ~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~l 208 (748)
+++...++|++|||++|||+|||+ .|..+... .|+.+.|++|+.+|++||+++++.++ ++|+|||||||||++|+|+
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 56655553 67889999999999999999999999 5799999999999999999
Q ss_pred HhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeE
Q 004512 209 RKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288 (748)
Q Consensus 209 r~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~ 288 (748)
|++..+++||||+|+|||++|+|+|+|.|++||++|+++|+|||||++|+|||++||.|+++++..++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999887777889999999
Q ss_pred EEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEe
Q 004512 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (748)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 368 (748)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+..++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccC
Q 004512 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (748)
Q Consensus 369 ~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~ 448 (748)
.|++++++++++++.++..++++||++||+..++||+++...++..++.|+|.+||||++++++|||||+++||++|++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~- 397 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQE- 397 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCH
Q 004512 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (748)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 527 (748)
.+++++|+|||+|+++++ ++++++||||.+++|.+|..+++|+.+|++.|+.++++++..|+.
T Consensus 398 ----------------~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~ 461 (732)
T KOG1050|consen 398 ----------------NKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDV 461 (732)
T ss_pred ----------------ccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhH
Confidence 356899999999999999 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCcccccCChHHHHHHhhccCceEEEecCCCCCCCCCCCCCCCC
Q 004512 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPS 607 (748)
Q Consensus 528 ~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~ 607 (748)
.+|+..|++.+. +||+.|+ +.+++..+ |+.+.+++.|+++++|+|+||||||+++..++.
T Consensus 462 ~~W~~~~~~~l~---------~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---- 521 (732)
T KOG1050|consen 462 VYWAKSFLQGLK---------RIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---- 521 (732)
T ss_pred HHHHHHHHHhhh---------hhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch----
Confidence 999999999444 4677777 77776655 888999999999999999999999999866444
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCcceecccCCCcchHHHHHHHHHHHh
Q 004512 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT 687 (748)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~~~~~~~~~w~~~v~~vl~~~~ 687 (748)
++..|+.||+||+|+|+|+|||++..|++|+.+++++|++||||+++|++++ |++.. .+.+|++.+++++++|+
T Consensus 522 --~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ 595 (732)
T KOG1050|consen 522 --AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYT 595 (732)
T ss_pred --HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999976 99874 68999999999999999
Q ss_pred ccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCCCeEEeeCCeEEEEecC
Q 004512 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748 (748)
Q Consensus 688 ~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~v~v~~Gk~vvEvrP~ 748 (748)
+|||||++|.|+++++||||+|||++|++||+||+.+|+. .+.++.|+.|+++|||+|+
T Consensus 596 ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~ 654 (732)
T KOG1050|consen 596 ERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQ 654 (732)
T ss_pred hcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEccc
Confidence 9999999999999999999999999999999999999998 8899999999999999995
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.6e-119 Score=1000.11 Aligned_cols=456 Identities=29% Similarity=0.518 Sum_probs=419.3
Q ss_pred CCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcchhhHHHhhhcCeEEEEEec
Q 004512 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (748)
Q Consensus 50 ~~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l 129 (748)
++||||||||+|+.. + + +.++|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 1 m~rLivVSNRlp~~~-----~--~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPD-----E--H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCC-----C--C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 369999999999632 1 1 3457899999988765 4789999999964322 2223333346799999999
Q ss_pred ChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHH
Q 004512 130 PADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLR 209 (748)
Q Consensus 130 ~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr 209 (748)
+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 5799999999999999999999999997 5999999999999999999
Q ss_pred hhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEE
Q 004512 210 KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV 289 (748)
Q Consensus 210 ~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~ 289 (748)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999875332 2467889999
Q ss_pred EEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 004512 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (748)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (748)
+|.++|+|||++.|...+..+ ...++++++++++++++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999998877655 4667888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCC
Q 004512 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (748)
Q Consensus 370 p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~ 449 (748)
|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++|||+++||+|||||||++||+||+.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHH
Q 004512 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (748)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 529 (748)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+
T Consensus 378 ---------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~ 442 (474)
T PRK10117 378 ---------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINH 442 (474)
T ss_pred ---------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 004512 530 WAKSIDQDLERACR 543 (748)
Q Consensus 530 W~~~fl~~l~~~~~ 543 (748)
|+++||.+|..+..
T Consensus 443 W~~~fL~~L~~~~~ 456 (474)
T PRK10117 443 WQECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998753
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2.5e-118 Score=1001.08 Aligned_cols=462 Identities=26% Similarity=0.451 Sum_probs=426.7
Q ss_pred EEcCCccceeEeCCCC-ceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCC-cch-hhHHHhhhcCeEEEEEecChh
Q 004512 56 VANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV-DDQ-EEVSTILLEKFKCVPTFLPAD 132 (748)
Q Consensus 56 vsnrlP~~~~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~-~~~-~~~~~~l~~~~~~~pv~l~~~ 132 (748)
||||||+.++++++|+ +|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876543 5888999999999999877655789999999975221 111 112222245799999999999
Q ss_pred hhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhc
Q 004512 133 VHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF 212 (748)
Q Consensus 133 ~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 212 (748)
++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.+++ +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5799999999999999999999999987 5999999999999999999999
Q ss_pred cCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCc--------------
Q 004512 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG-------------- 278 (748)
Q Consensus 213 ~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g-------------- 278 (748)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999987754321
Q ss_pred ---eeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhC
Q 004512 279 ---YIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355 (748)
Q Consensus 279 ---~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 355 (748)
.+++.|+||+++|+++|+|||++.|.+...++++.++++++|++++|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 13488999999999999999999999888888888888999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccC
Q 004512 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGM 435 (748)
Q Consensus 356 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 435 (748)
|+++||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 004512 436 NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (748)
Q Consensus 436 nLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (748)
|||++|||||+++ ++||||+|||+||++++.+|++|||||++++|+||.+||+||.+||+.|+
T Consensus 395 NLVa~Eyva~~~~-----------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~ 457 (487)
T TIGR02398 395 NLVAKEYVAAQGL-----------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARM 457 (487)
T ss_pred CcchhhHHhhhcC-----------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999873 47899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 004512 516 EKHYKYISSHDVAYWAKSIDQDLER 540 (748)
Q Consensus 516 ~~~~~~V~~~~~~~W~~~fl~~l~~ 540 (748)
++++++|++||+++|+++|+.+|..
T Consensus 458 ~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 458 REMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999874
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.1e-118 Score=1006.15 Aligned_cols=467 Identities=42% Similarity=0.802 Sum_probs=358.3
Q ss_pred cEEEEEcCCccceeEeCCCCc--eEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcc--hhhHHHhhhcCeEEEEE
Q 004512 52 RRIIVANQLPVKAYYEKDSNK--WGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD--QEEVSTILLEKFKCVPT 127 (748)
Q Consensus 52 rliivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~--~~~~~~~l~~~~~~~pv 127 (748)
|+||||||||+.++++++.|. |+++.+.|||++++.+.+ +..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999998874444 888889999999987644 3479999999998876544 55666778899999999
Q ss_pred ecChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHH
Q 004512 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (748)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~ 207 (748)
|++++++++||+||||++|||+|||..+..+ ....|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876212 226899999999999999999999999996 59999999999999999
Q ss_pred HHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCe
Q 004512 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (748)
Q Consensus 208 lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr 287 (748)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6999999
Q ss_pred EEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 288 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
.++|.++|+|||++.|...+.++++.++++++++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988889999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++|+
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhC
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 525 (748)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+|
T Consensus 397 ~~-----------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~ 459 (474)
T PF00982_consen 397 DD-----------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREH 459 (474)
T ss_dssp -T-----------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT
T ss_pred cC-----------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhC
Confidence 73 479999999999999997 679999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 004512 526 DVAYWAKSIDQDLER 540 (748)
Q Consensus 526 ~~~~W~~~fl~~l~~ 540 (748)
|+.+|+++||++|++
T Consensus 460 ~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 460 DVQWWAESFLRDLKR 474 (474)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhC
Confidence 999999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-112 Score=937.33 Aligned_cols=468 Identities=39% Similarity=0.660 Sum_probs=431.8
Q ss_pred CCCCCCCcEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcchhhHHHhhhcCeEE
Q 004512 45 TIVEPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKC 124 (748)
Q Consensus 45 ~~~~~~~rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~ 124 (748)
.+.....|+|+||||+|+...+..+++...+..++|||+++|+..+ ...+++|+||+|...+.++.....+....++..
T Consensus 9 ~~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~ 87 (486)
T COG0380 9 ASPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTS 87 (486)
T ss_pred cCcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceE
Confidence 3456778999999999999876666667888999999999997644 458999999999765423322233334558999
Q ss_pred EEEecChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhH
Q 004512 125 VPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVL 204 (748)
Q Consensus 125 ~pv~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~ll 204 (748)
.||+++.+++++||++|||.+|||+|||+.+. ..|++++|++|++||++||++|++.+++ +|+||||||||+++
T Consensus 88 ~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~ 161 (486)
T COG0380 88 APVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLV 161 (486)
T ss_pred EEEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhh
Confidence 99999999999999999999999999999865 5799999999999999999999999997 59999999999999
Q ss_pred HHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEE-
Q 004512 205 PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD- 283 (748)
Q Consensus 205 p~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~- 283 (748)
|+|||++.|+++||||||+|||++|+|+|||+|++||+|||+||+|||||++|++||+++|+|+++.... ..+.
T Consensus 162 P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~ 236 (486)
T COG0380 162 PQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRF 236 (486)
T ss_pred HHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred --ecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCC
Q 004512 284 --YFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRG 360 (748)
Q Consensus 284 --~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~ 360 (748)
++|+.+++..+|+|||+..|.....++.+..+..++++.+.+ +++|+||||+|+.||+..+++||++||++||+|+|
T Consensus 237 ~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~ 316 (486)
T COG0380 237 NGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRG 316 (486)
T ss_pred cccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhC
Confidence 447999999999999999999998888888888999999976 99999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhh
Q 004512 361 KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPY 440 (748)
Q Consensus 361 ~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~ 440 (748)
||+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+.+.++++++.+||+.|||+++||+|||||||++
T Consensus 317 kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvak 396 (486)
T COG0380 317 KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAK 396 (486)
T ss_pred ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 004512 441 KYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520 (748)
Q Consensus 441 Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 520 (748)
||+||+. +++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+.+||+.|++++++
T Consensus 397 EyVa~q~-----------------~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~ 459 (486)
T COG0380 397 EYVAAQR-----------------DKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLK 459 (486)
T ss_pred HHHHhhc-----------------CCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 9999987 35799999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHH
Q 004512 521 YISSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 521 ~V~~~~~~~W~~~fl~~l~~~ 541 (748)
.|.+||+++|+++|+.+|...
T Consensus 460 ~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 460 QVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHHhhhHHHHHHHHHHHHHhc
Confidence 999999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=3.9e-107 Score=915.44 Aligned_cols=454 Identities=39% Similarity=0.686 Sum_probs=421.2
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCc-chhhHHHhhhcCeEEEEEecC
Q 004512 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTFLP 130 (748)
Q Consensus 52 rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~-~~~~~~~~l~~~~~~~pv~l~ 130 (748)
||||||||+|+.+.++ + ++.+.|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988653 1 56678999999988665 47999999999765433 234454556788999999999
Q ss_pred hhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHh
Q 004512 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (748)
Q Consensus 131 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~ 210 (748)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5799999999999999999999999987 59999999999999999999
Q ss_pred hccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEE
Q 004512 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (748)
Q Consensus 211 ~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~ 290 (748)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876542 3678899999
Q ss_pred EEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecC
Q 004512 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (748)
Q Consensus 291 i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 370 (748)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999998877777777777889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCC
Q 004512 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (748)
Q Consensus 371 ~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~ 450 (748)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHH
Q 004512 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (748)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W 530 (748)
+.|+||+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|
T Consensus 382 ---------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 446 (456)
T TIGR02400 382 ---------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446 (456)
T ss_pred ---------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 004512 531 AKSIDQDLE 539 (748)
Q Consensus 531 ~~~fl~~l~ 539 (748)
+++|+.+|.
T Consensus 447 ~~~~l~~l~ 455 (456)
T TIGR02400 447 REDFLSDLN 455 (456)
T ss_pred HHHHHHHhh
Confidence 999999885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1.1e-97 Score=843.87 Aligned_cols=459 Identities=42% Similarity=0.759 Sum_probs=424.9
Q ss_pred cEEEEEcCCccceeEeCCCCceEEEecCCchhHhhhhcCCCCCceEEEeccCcccCCcchhhHHHhhhcCeEEEEEecCh
Q 004512 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPA 131 (748)
Q Consensus 52 rliivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~ 131 (748)
|+||||||+|+.++++++ |.|+++++.|||+.+|.+.+. ..+++||||++.+.+..+.+.+.+.+..+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998765 489999999999999987554 579999999998766544444556677899999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhh
Q 004512 132 DVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKR 211 (748)
Q Consensus 132 ~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~ 211 (748)
++++.||+||||++|||+|||..+. .+|+.++|++|+++|++||++|++.+++ +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5799999999999999999999999997 599999999999999999999
Q ss_pred ccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEE
Q 004512 212 FHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291 (748)
Q Consensus 212 ~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i 291 (748)
.++++||||+|||||++|+|+++|++++|+++|++||+|||||++|++||+++|+++++.+.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886552 358899999999
Q ss_pred EEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCC
Q 004512 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (748)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (748)
.++|+|||++.|.+....++..+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999987766555555556677777899999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCc
Q 004512 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (748)
Q Consensus 372 r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 451 (748)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999873
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHH
Q 004512 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (748)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~ 531 (748)
++|+||+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.++++++++|.++++..|+
T Consensus 387 --------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~ 452 (460)
T cd03788 387 --------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452 (460)
T ss_pred --------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 468999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004512 532 KSIDQDL 538 (748)
Q Consensus 532 ~~fl~~l 538 (748)
++|+++|
T Consensus 453 ~~~l~~l 459 (460)
T cd03788 453 NSFLDDL 459 (460)
T ss_pred HHHHHhh
Confidence 9999887
No 12
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-33 Score=290.38 Aligned_cols=172 Identities=34% Similarity=0.534 Sum_probs=153.7
Q ss_pred ChHHHHHHhhccCceEEEecCCCCCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceee
Q 004512 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (748)
Q Consensus 572 ~~~~i~~~y~~s~~rli~lDyDGTL~p~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~ 649 (748)
....+.+.|..+++++||+||||||+++. |+.+.|+++++++|++|+++++|.|+|+|||+.+++++|++ +|+++|+
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 44567788999999999999999999988 57889999999999999999999999999999999999998 7999999
Q ss_pred ecCceEEeecCCCcceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhh
Q 004512 650 AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (748)
Q Consensus 650 aehG~~i~~~~~~~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~ 729 (748)
||||+|+|.+.+..|....+..+..|++.+.++++++.+++||++||.|+++++||||+|+++.+..+|.+....+.
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~--- 160 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI--- 160 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc---
Confidence 99999998887877787666677889999999999999999999999999999999999988887766666554443
Q ss_pred cCCC-eEEeeCCeEEEEecC
Q 004512 730 ANEP-VVVKRGQHIVEVKPQ 748 (748)
Q Consensus 730 ~~~~-v~v~~Gk~vvEvrP~ 748 (748)
+.. ++|+.||++|||||.
T Consensus 161 -~~~~~~v~~gk~vVEvrp~ 179 (266)
T COG1877 161 -NELKLRVTPGKMVVELRPP 179 (266)
T ss_pred -ccccEEEEeCceEEEEeeC
Confidence 333 999999999999995
No 13
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.4e-29 Score=299.29 Aligned_cols=502 Identities=15% Similarity=0.131 Sum_probs=304.8
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhh-----------------cCcchHHH-HHHhhhcCEEEe
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----------------TLPVRDEI-LKSLLNSDLIGF 252 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr-----------------~lp~r~~i-l~~ll~~DlIgF 252 (748)
.|+||-|+++-..+...|++++ ++|.+++.|+.= .+-++ .++.|-++ -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 3899999999888888888875 689999999631 11111 01222221 123677899999
Q ss_pred eCHHHHHHHHHHH-------HHHhCccccccCceeEEEecCe-EEEEEEeeccCCcccccccccCchh------------
Q 004512 253 HTFDYARHFLSSC-------SRMLGLNYESKRGYIGLDYFGR-TVSIKILPVGIHMGQFESIMSLDVT------------ 312 (748)
Q Consensus 253 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~g~~~i~~~gr-~~~i~v~p~GId~~~f~~~~~~~~~------------ 312 (748)
.|......-...- .|.|.. ...+ ++.++|+ .-++.|+|+|||++.|.+.....+.
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~ 462 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKP 462 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccc
Confidence 9887776533210 011100 0111 1333332 2388999999999999874211100
Q ss_pred -HHHHHHHHHHc--CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchh----HHHHHHHH
Q 004512 313 -GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKD----VQDLLSDT 385 (748)
Q Consensus 313 -~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~----~~~l~~ei 385 (748)
.....+++..+ +++++|++|||+++.||+..+|+||.++.+..+.. ++.+ ++|... ...+ ...+..++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSV 537 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHH
Confidence 00112344333 57899999999999999999999999987543321 2333 345311 1111 11234566
Q ss_pred HHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC----cEEEecCCCccCCchhhhhhhhccCCCccccccCCCCC
Q 004512 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (748)
Q Consensus 386 ~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~ 461 (748)
..++++.+.. + .|. |.++++.++++++|+.| ||||+||.+||||++++||||||.
T Consensus 538 ~~li~~lgL~-g-----~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-------------- 596 (1050)
T TIGR02468 538 LKLIDKYDLY-G-----QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-------------- 596 (1050)
T ss_pred HHHHHHhCCC-C-----eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC--------------
Confidence 6676665432 2 355 55789999999999998 699999999999999999999975
Q ss_pred CCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004512 462 NPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 538 (748)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.+ +.++.+.++.++.+.+++|..-++.|++.+
T Consensus 597 -------PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i 668 (1050)
T TIGR02468 597 -------PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRI 668 (1050)
T ss_pred -------CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 899999999988873 599999999999999999999865 456667777889999999999999999888
Q ss_pred HHHHHhccc-cccc-----c-----cC--------CCcceeEeec----C--ccc-ccCC----hHHHHH----------
Q 004512 539 ERACRDHLF-KRCW-----G-----VG--------LGLGFRIVAL----G--PEF-RKLG----MHHIAS---------- 578 (748)
Q Consensus 539 ~~~~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~----~--~~f-~~l~----~~~i~~---------- 578 (748)
......+.. ++.. . .+ +++.+.+-.- + .+. ..++ ...|.+
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 669 ASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred HHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 876544311 0000 0 01 0111110000 0 000 0000 001111
Q ss_pred -------------Hhh--ccCceEEE--ecCCCCCCCCCCCCCCCCHHHHHHHHHHhc---CCCCcEEEEcCCChhhHhh
Q 004512 579 -------------AYN--KTNSRLIL--LDYDGTVMPQTSEDKRPSTEVLSILNDLCN---DPKNAVFIVSGRGKDSLGN 638 (748)
Q Consensus 579 -------------~y~--~s~~rli~--lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~---d~~~~V~IvSGR~~~~L~~ 638 (748)
.|. +..+++|+ +|+|+| .. ..+.+..+++.+.+ .....++++|||+++.+.+
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~ 820 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHH
Confidence 111 12356776 999999 22 12334444455542 2346788999999999888
Q ss_pred hhcC--CC---CceeeecCceEEeecC-----CCcceec---ccCCCcchH-HHHHHHHHHHhccC--------CCeEEe
Q 004512 639 WFSG--VE---KLGLSAEHGYFTRWSK-----NSAWEIC---SLTRDFDWK-EIAEPVMKLYTETT--------DGSFIE 696 (748)
Q Consensus 639 ~~~~--~~---~l~l~aehG~~i~~~~-----~~~w~~~---~~~~~~~w~-~~v~~vl~~~~~~~--------~Gs~iE 696 (748)
.+.. +| .-.+||+-|++|.++. +..|..- ....+..|. +.+++.+..+.... ++...|
T Consensus 821 ~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q 900 (1050)
T TIGR02468 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEE 900 (1050)
T ss_pred HHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceec
Confidence 7642 22 2347999999999862 1122210 012346673 55676665554422 445555
Q ss_pred ecC----cEEEEEcccCCcCchHHHHHHHHHHHHhhhcCCCeEEe--eCCeEEEEec
Q 004512 697 DKE----TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVK--RGQHIVEVKP 747 (748)
Q Consensus 697 ~K~----~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~v~v~--~Gk~vvEvrP 747 (748)
..+ +++++.-.+ |+.. ...++|...|.. +...+.++ ++-..+.|-|
T Consensus 901 ~~~~q~~~k~SY~v~d--~~~~-~~v~elr~~Lr~--~gLr~~~iys~~~~~LDVlP 952 (1050)
T TIGR02468 901 DEESSTDHCYAFKVKD--PSKV-PPVKELRKLLRI--QGLRCHAVYCRNGTRLNVIP 952 (1050)
T ss_pred ChhhCCCceEEEEecC--cccC-ccHHHHHHHHHh--CCCceEEEeecCCcEeeeee
Confidence 443 566665333 3322 234566665543 12234443 4446777766
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.97 E-value=1.6e-32 Score=284.99 Aligned_cols=159 Identities=39% Similarity=0.707 Sum_probs=121.3
Q ss_pred EecCCCCCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCccee
Q 004512 589 LLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (748)
Q Consensus 589 ~lDyDGTL~p~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~ 666 (748)
||||||||+|+.+ ..+.|+++++++|++||++++|.|+|||||++++++.++ .+|+++|+||||+|++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~-~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG-GIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc-CCCCceEEEEeeEEeccCccccccc
Confidence 7999999999884 678899999999999999999999999999999965555 5789999999999999998877876
Q ss_pred cccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCC-CeEEeeCCeEEEE
Q 004512 667 CSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEV 745 (748)
Q Consensus 667 ~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~-~v~v~~Gk~vvEv 745 (748)
.....+..|++.+.++++.+++++||++||+|+++++||||+|+++++..|++++..++.+++... +++++.||++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444566789999999999999999999999999999999999999999999999999999988765 8999999999999
Q ss_pred ecC
Q 004512 746 KPQ 748 (748)
Q Consensus 746 rP~ 748 (748)
||+
T Consensus 160 rp~ 162 (235)
T PF02358_consen 160 RPP 162 (235)
T ss_dssp E-T
T ss_pred EeC
Confidence 995
No 15
>PLN02151 trehalose-phosphatase
Probab=99.95 E-value=6.1e-28 Score=259.50 Aligned_cols=161 Identities=20% Similarity=0.368 Sum_probs=134.4
Q ss_pred hccCceEEEecCCCCCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEee
Q 004512 581 NKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658 (748)
Q Consensus 581 ~~s~~rli~lDyDGTL~p~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~ 658 (748)
..+++++|||||||||+|++ |..+.++++++++|++|+++ ..|+|||||+++.++++++ +++++|+|+||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 46678999999999999987 46778999999999999964 5899999999999999997 4789999999999987
Q ss_pred cC-CCccee----cccCCCcchHHHHHHHHHHH---hccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhc
Q 004512 659 SK-NSAWEI----CSLTRDFDWKEIAEPVMKLY---TETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (748)
Q Consensus 659 ~~-~~~w~~----~~~~~~~~w~~~v~~vl~~~---~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~ 730 (748)
++ +..|+. .....+..|.+.+.++++.+ ++++||++||+|+++++||||++|++ ++.++..++++++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 345641 11123557888877776654 57899999999999999999999876 23567788888888
Q ss_pred CCC-eEEeeCCeEEEEecC
Q 004512 731 NEP-VVVKRGQHIVEVKPQ 748 (748)
Q Consensus 731 ~~~-v~v~~Gk~vvEvrP~ 748 (748)
+++ ++|++||+|+||||+
T Consensus 247 ~~~~l~v~~GkkVvEvrP~ 265 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPI 265 (354)
T ss_pred hCCCcEEecCCEEEEEeCC
Confidence 877 899999999999994
No 16
>PLN02580 trehalose-phosphatase
Probab=99.95 E-value=5.3e-28 Score=262.95 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=132.2
Q ss_pred HHhhccCceEEEecCCCCCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceE
Q 004512 578 SAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (748)
Q Consensus 578 ~~y~~s~~rli~lDyDGTL~p~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~ 655 (748)
.+|.++++++|||||||||+|+. |..+.|+++++++|++|+++ ..|+|||||++++|+++++. ++++|+|+||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 47889999999999999999988 57889999999999999987 47999999999999999975 579999999999
Q ss_pred EeecCC------------------CcceecccCCCcchHHHHHHHHHH---HhccCCCeEEeecCcEEEEEcccCCcCch
Q 004512 656 TRWSKN------------------SAWEICSLTRDFDWKEIAEPVMKL---YTETTDGSFIEDKETAIVWHHQHADPHFG 714 (748)
Q Consensus 656 i~~~~~------------------~~w~~~~~~~~~~w~~~v~~vl~~---~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g 714 (748)
++.+.+ .+|.. . .....|.+.+.++++. +++++||++||+|+++++||||+|+++++
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~-~-~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~ 266 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNL-F-QPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNW 266 (384)
T ss_pred eecCCCCcccccccccccccccccccccc-c-ccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHH
Confidence 986421 12321 1 1245677666666554 66788999999999999999999998887
Q ss_pred HHHHHHHHHHHHhhhcCCC-eEEeeCCeEEEEec
Q 004512 715 SCQAKELLDHLENVLANEP-VVVKRGQHIVEVKP 747 (748)
Q Consensus 715 ~~qa~el~~~l~~~~~~~~-v~v~~Gk~vvEvrP 747 (748)
..++.++...+ .+++ ++++.|++++||||
T Consensus 267 ~~~~~~l~~~l----~~~~~l~v~~Gk~vlEVrP 296 (384)
T PLN02580 267 PLVAQCVHDVL----KKYPRLRLTHGRKVLEVRP 296 (384)
T ss_pred HHHHHHHHHHH----HhCCceEEEeCCeEEEEec
Confidence 76666655544 4555 99999999999998
No 17
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.95 E-value=6.5e-27 Score=244.30 Aligned_cols=160 Identities=31% Similarity=0.470 Sum_probs=137.1
Q ss_pred cCceEEEecCCCCCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecC
Q 004512 583 TNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSK 660 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~ 660 (748)
+++++|||||||||+|+. |..+.|++++.++|++|++++++.|+|+|||+..++.+.+. +++++++|+||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~-~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVK-LPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCC-CCceeEEeecCEEEecCC
Confidence 578999999999999976 56778999999999999999999999999999999988774 578999999999998743
Q ss_pred CC-cceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccC-CcCchHHHHHHHHHHHHhhhcCCCeEEee
Q 004512 661 NS-AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKR 738 (748)
Q Consensus 661 ~~-~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~a-dpe~g~~qa~el~~~l~~~~~~~~v~v~~ 738 (748)
.. .|.... .....|++.+.++++.+.++ ||++||+|+++++||||+| ||+++..|+.+++.++. ...++.|+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 32 455432 22247999999999888877 9999999999999999999 99999988888887764 345899999
Q ss_pred CCeEEEEecC
Q 004512 739 GQHIVEVKPQ 748 (748)
Q Consensus 739 Gk~vvEvrP~ 748 (748)
|++++|++|.
T Consensus 155 g~~~~e~~p~ 164 (244)
T TIGR00685 155 GKAVVELKPR 164 (244)
T ss_pred CCeEEEEeeC
Confidence 9999999995
No 18
>PLN03017 trehalose-phosphatase
Probab=99.94 E-value=3.1e-26 Score=246.94 Aligned_cols=162 Identities=22% Similarity=0.319 Sum_probs=132.2
Q ss_pred HhhccCceEEEecCCCCCCCCCC--CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEE
Q 004512 579 AYNKTNSRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT 656 (748)
Q Consensus 579 ~y~~s~~rli~lDyDGTL~p~~~--~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i 656 (748)
++.+.++++||+||||||+|+.. ..+.+++++.++|++|++ +..|+|+|||++..+.++++. .+++++|+||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l-~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKL-AELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcc-cCceEEEcCCcEE
Confidence 34466889999999999999885 455799999999999994 578999999999999999754 6799999999999
Q ss_pred eecCCCccee-------cccCCCcchHHHHHHH---HHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHH
Q 004512 657 RWSKNSAWEI-------CSLTRDFDWKEIAEPV---MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLE 726 (748)
Q Consensus 657 ~~~~~~~w~~-------~~~~~~~~w~~~v~~v---l~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~ 726 (748)
+.+++ .|.. ........|++.+.++ ++.+++++||++||+|+++++||||++|++. +.++..++.
T Consensus 182 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELVLQVR 256 (366)
T ss_pred ecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHHHHHH
Confidence 87643 2321 0011234577777766 5667889999999999999999999998753 457888888
Q ss_pred hhhcCCC-eEEeeCCeEEEEecC
Q 004512 727 NVLANEP-VVVKRGQHIVEVKPQ 748 (748)
Q Consensus 727 ~~~~~~~-v~v~~Gk~vvEvrP~ 748 (748)
+++++++ +++++||+|+||||+
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~ 279 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPM 279 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCC
Confidence 8888876 899999999999994
No 19
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=5.3e-25 Score=243.28 Aligned_cols=301 Identities=18% Similarity=0.153 Sum_probs=209.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhh
Q 004512 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (748)
Q Consensus 166 ~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll 245 (748)
...+..|...++.++.++.... +.|+||+|+++.+.++...+. .++|++++.|+++.... . .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~--~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~---~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDL--DADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-R---RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccC--CCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-H---HHHHHHHHHHH
Confidence 4467888888887776533332 349999999998777666543 36788999999875321 0 01122233345
Q ss_pred hcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--
Q 004512 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (748)
Q Consensus 246 ~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (748)
.+|.+.+.+.++++.+ +..+ ++ ++|+|||+........ ..+....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNREL---SPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCC
Confidence 6787777663322111 0111 23 8999999764211111 112234456666
Q ss_pred -CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 324 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
.++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.++.+. . .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~----~--~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEG----D--P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCC----C--C
Confidence 478999999999999999999999999988888876 8888854321 12222322 333322221 1 1
Q ss_pred cEEEecCC-CChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc
Q 004512 403 PIVIIKEP-LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (748)
Q Consensus 403 pV~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (748)
.|.+++.. ++.+++.++|++||+|++||.+||||++++||||||. |+|+|..+|..+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~---------------------Pvv~s~~~~~~~~ 311 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK---------------------PVIAGPVGGIPLQ 311 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC---------------------CEEEcCCCCchhh
Confidence 36666543 4899999999999999999999999999999999975 8999999998887
Q ss_pred cC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 004512 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (748)
Q Consensus 482 l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~ 540 (748)
+. +|++++ +.+++|++|.++++++ ++++.+.+++++++. .+++...++++++.+++
T Consensus 312 i~~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 312 IEDGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cccCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 73 478887 4678899999999874 467777788888875 68999999999887654
No 20
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=237.87 Aligned_cols=269 Identities=18% Similarity=0.251 Sum_probs=202.4
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
.|+|++|+.. .+...++++.+++++.+.+|..|.. +.+ -.++.|.+.+.. .+.++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~-~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQF-LKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHH-HHHHHHh---hC-
Confidence 5999999843 4446678888999999999987631 111 235777777653 3333321 11
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLA 347 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 347 (748)
...++.++|+|||...|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 012467899999998876421 12234444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEE
Q 004512 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (748)
Q Consensus 348 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 427 (748)
+.++.+++|+++ |+++|.+......+..++++++++++.+++. .|++ .|.++.+++..+|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~~-~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCIM-LGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEEE-eCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334567777777766532 3554 56889999999999999999
Q ss_pred ecCC-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE-EeCCCCHHHHHHHHHH
Q 004512 428 VNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDS 502 (748)
Q Consensus 428 vtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~VnP~d~~~~A~ai~~ 502 (748)
+||. .||||++++||||||. |+|+|..+|+.+.+. +|+ +++|.|++++|++|.+
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~---------------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK---------------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR 340 (380)
T ss_pred eCCCCccccccHHHHHHHcCC---------------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH
Confidence 9997 5999999999999975 899999999888773 366 6789999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 004512 503 ALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (748)
Q Consensus 503 aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 540 (748)
++++++ +..+.++.++++ +++++..-+++|++.++.
T Consensus 341 ll~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 341 TLADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHcCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999874 355677788776 568999999998888764
No 21
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=4e-24 Score=251.43 Aligned_cols=318 Identities=14% Similarity=0.141 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcchhhHHHHHHhh-----ccCCeEEEEecCC-----CCchhHh-hcCcch
Q 004512 170 QAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSP-----FPSSEIY-RTLPVR 237 (748)
Q Consensus 170 ~~Y~~vN~~fA~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~P-----fPs~e~f-r~lp~r 237 (748)
..|.-+.+..++.+... .+| ||||+||||..++|.++.+. +.++++.|++|.- ||...+. ..+|+.
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 34444444444444332 234 89999999999985544432 4568999999954 3322221 112211
Q ss_pred ---------------HHHH-HHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcc
Q 004512 238 ---------------DEIL-KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG 301 (748)
Q Consensus 238 ---------------~~il-~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~ 301 (748)
-.++ -|+..||.|..-++.|++.-++ ..--|++. .+..+..++.+||||||++
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTD 737 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehh
Confidence 1123 3577799999999999988654 11111110 1223456788999999999
Q ss_pred cccccccC-----------chhHHHHHHHHHHcC------CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEE
Q 004512 302 QFESIMSL-----------DVTGQKVKELKEKFD------GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL 364 (748)
Q Consensus 302 ~f~~~~~~-----------~~~~~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 364 (748)
.|.+.... .........++++++ +.++|++|||+++.||+..+++|+.++++ ++. .|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv----qL 811 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG----QF 811 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----EE
Confidence 98764210 001122345777772 35899999999999999999999998875 333 48
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhh
Q 004512 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444 (748)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama 444 (748)
|++|. |++ ..+++++..++.+++.. + .|.|+ +.++......+|+.||+||+||.+|||||+++|||+
T Consensus 812 VIvGd-----Gp~-~~~e~eL~~La~~l~l~----d--rV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMA 878 (977)
T PLN02939 812 VLLGS-----SPV-PHIQREFEGIADQFQSN----N--NIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878 (977)
T ss_pred EEEeC-----CCc-HHHHHHHHHHHHHcCCC----C--eEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHH
Confidence 87773 322 13556777777665321 1 36654 467777778999999999999999999999999999
Q ss_pred hccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc------------CCcEEeCCCCHHHHHHHHHHHhc---CCHH
Q 004512 445 SRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL------------SGAIRVNPWNVDAVADAMDSALQ---MENQ 509 (748)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------------~~ai~VnP~d~~~~A~ai~~aL~---m~~~ 509 (748)
||. |+|+|..+|..+.+ .+|++++|.|+++++++|.+++. ..++
T Consensus 879 yGt---------------------PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe 937 (977)
T PLN02939 879 YGS---------------------VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPE 937 (977)
T ss_pred CCC---------------------CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHH
Confidence 975 78899999998766 24899999999999999999986 2344
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 004512 510 EKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (748)
Q Consensus 510 er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 542 (748)
.++.+.++. +...+++...++.|.+-..++.
T Consensus 938 ~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 938 VWKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 444443332 2357899999999887766654
No 22
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.93 E-value=2.9e-24 Score=244.99 Aligned_cols=294 Identities=19% Similarity=0.213 Sum_probs=199.3
Q ss_pred CCEEEEeCcchhhHHHHHHhhc----cCCeEEEEecCC-CCc---hhHhhcC--cc-------------hHHHHHHhhhc
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRF----HRVKVGFFLHSP-FPS---SEIYRTL--PV-------------RDEILKSLLNS 247 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~----~~~~ig~flH~P-fPs---~e~fr~l--p~-------------r~~il~~ll~~ 247 (748)
-|+||.||+|..++|.+++++. .+++++++.|.. +.. .+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 4999999999999999998663 468999999976 211 1111111 11 01122345667
Q ss_pred CEEEeeCHHHHHHHHHHHHHHhCccccccCceeEE--EecCeEEEEEEeeccCCcccccccccC-----------chhHH
Q 004512 248 DLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGL--DYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQ 314 (748)
Q Consensus 248 DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i--~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~ 314 (748)
|.|...+..+++..... ..| . ++ .+..+..++.++|+|||++.|.+.... ....+
T Consensus 199 d~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 77777776666543210 000 0 00 011234478899999999998763210 01112
Q ss_pred HHHHHHHHcC----CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 004512 315 KVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (748)
Q Consensus 315 ~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 390 (748)
..+.++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|. |+ ..++++++++++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHHH
Confidence 2345677763 568999999999999999999999998753 3 34877773 22 134566777776
Q ss_pred HHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceE
Q 004512 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (748)
Q Consensus 391 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (748)
+.+. .++++.+. +.+....+|+.||++|+||.+||||++.+|||+||. |+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~---------------------p~ 383 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT---------------------LP 383 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCC---------------------CE
Confidence 5432 25555443 566677999999999999999999999999999975 78
Q ss_pred EEeCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 471 IVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 471 V~Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
|+|..+|+.+.+ + +|++|+|.|+++++++|.++++.. ++.++.+.++.. ...+++..=++++++-.+
T Consensus 384 V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~ 461 (466)
T PRK00654 384 IVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYR 461 (466)
T ss_pred EEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHH
Confidence 999999999887 2 389999999999999999998732 223333333332 256788888888877665
Q ss_pred HH
Q 004512 540 RA 541 (748)
Q Consensus 540 ~~ 541 (748)
++
T Consensus 462 ~~ 463 (466)
T PRK00654 462 RL 463 (466)
T ss_pred HH
Confidence 54
No 23
>PLN02316 synthase/transferase
Probab=99.93 E-value=1.5e-23 Score=250.81 Aligned_cols=309 Identities=12% Similarity=0.092 Sum_probs=219.0
Q ss_pred hHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcchhhHHHHHHhh-----ccCCeEEEEecCCCCchhHhhcCcchHHHH
Q 004512 168 EWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSPFPSSEIYRTLPVRDEIL 241 (748)
Q Consensus 168 ~w~~Y~~vN~~fA~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~ig~flH~PfPs~e~fr~lp~r~~il 241 (748)
....|..+++..++.+... .+| ||||+||+|-.++|.++++. +.++++++++|..-- ....+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHH
Confidence 3445555555555544332 133 89999999999999999875 356899999996421 112234
Q ss_pred HHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccC--c-----h---
Q 004512 242 KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--D-----V--- 311 (748)
Q Consensus 242 ~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~--~-----~--- 311 (748)
.++..||.|.--+..|++..+.. .. + ..+..++.+||+|||++.|.+.... | +
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~----~~-----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN----SA-----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc----cC-----------c--ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56788999999999888776531 00 0 1123477899999999988653210 0 0
Q ss_pred --hHHHHHHHHHHcC----CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHH
Q 004512 312 --TGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDT 385 (748)
Q Consensus 312 --~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei 385 (748)
.......++++++ +.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHH
Confidence 0122345777773 578999999999999999999999999863 3 33777773 333 2456788
Q ss_pred HHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCC
Q 004512 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQ 465 (748)
Q Consensus 386 ~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~ 465 (748)
.+++.+++..+.. .|.+.. ..+......+|++||+||+||..|||||+.+|||+||.
T Consensus 888 ~~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~Gt------------------ 944 (1036)
T PLN02316 888 VNLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGS------------------ 944 (1036)
T ss_pred HHHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCC------------------
Confidence 8888877654431 355543 34443345799999999999999999999999999975
Q ss_pred CCceEEEeCCCCccccc-C---------------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhCCHH
Q 004512 466 KKSVIIVSEFIGCSPSL-S---------------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVA 528 (748)
Q Consensus 466 ~~g~lV~Se~~G~~~~l-~---------------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~ 528 (748)
|+|+|..+|..+.+ + +|++|+|.|+++++++|.++|....+.+..+.+..++.+ ..++|.
T Consensus 945 ---ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~ 1021 (1036)
T PLN02316 945 ---IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWN 1021 (1036)
T ss_pred ---CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHH
Confidence 78889999999887 2 489999999999999999999875333333344455555 458998
Q ss_pred HHHHHHHHHHHHHH
Q 004512 529 YWAKSIDQDLERAC 542 (748)
Q Consensus 529 ~W~~~fl~~l~~~~ 542 (748)
.=++.|++..+++.
T Consensus 1022 ~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1022 RPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHHh
Confidence 88998887766543
No 24
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.93 E-value=1e-23 Score=238.78 Aligned_cols=297 Identities=15% Similarity=0.121 Sum_probs=192.3
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCch-h-Hhh------------cCcchHH-HHHHhhhcCEEEeeCH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS-E-IYR------------TLPVRDE-ILKSLLNSDLIGFHTF 255 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~-e-~fr------------~lp~r~~-il~~ll~~DlIgF~t~ 255 (748)
.|+|++|+++..++..++++.. ++|++++.|...... . +.. .+..+-. ....+..+|.|...+.
T Consensus 115 ~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 193 (439)
T TIGR02472 115 PDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTH 193 (439)
T ss_pred CCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCH
Confidence 3999999988777777776654 679999999753221 0 000 0010100 0122345666655554
Q ss_pred HHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEec
Q 004512 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVD 333 (748)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vd 333 (748)
..+..-+. ... .-...++.++|+|||++.|.+....++.....+.+++.. +++++|++||
T Consensus 194 ~~~~~~~~---~~~---------------~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 194 QEIEEQYA---LYD---------------SYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHH---hcc---------------CCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 32221110 000 112347889999999999876422111111112222222 4678999999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEec-CCCCCch-hHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004512 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN-PARSSGK-DVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (748)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~-~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v 411 (748)
|+++.||+..+|+||.++.+..+.. ++++ ++|. +.+.... ...++.+++.+++++++- .+ .|. +.+.+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l----~~--~V~-f~g~~ 325 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYDL----YG--KVA-YPKHH 325 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcCC----Cc--eEE-ecCCC
Confidence 9999999999999998753221111 2222 2342 1111110 011233345555555432 22 255 55788
Q ss_pred ChhhHHHHHHhC----cEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---C
Q 004512 412 STQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (748)
Q Consensus 412 ~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (748)
+.+++.++|+.| |+||+||.+||||++++||||||. |+|+|..+|+.+.+. +
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~---------------------PvV~s~~gg~~eiv~~~~~ 384 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL---------------------PIVATDDGGPRDIIANCRN 384 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC---------------------CEEEeCCCCcHHHhcCCCc
Confidence 999999999988 999999999999999999999975 899999999998884 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHH
Q 004512 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (748)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l 538 (748)
|++|+|.|++++|++|.++++++ ++++.+.++.++++. .+++..-++.|++-|
T Consensus 385 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 385 GLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999975 467778888888875 578888888777654
No 25
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=7.4e-24 Score=242.29 Aligned_cols=319 Identities=14% Similarity=0.153 Sum_probs=215.4
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcchhhHHHHHHhhc------cCCeEEEEecCCC-----CchhHhhcC
Q 004512 167 GEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYRTL 234 (748)
Q Consensus 167 ~~w~~Y~~vN~~fA~~i~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----Ps~e~fr~l 234 (748)
+....|.-.++..++.+... ++| |+||+||+|..++|.+++++. .++|++++.|... |...+-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44566666666666655432 234 899999999999999998763 4789999999752 221111113
Q ss_pred cch------------HHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCccc
Q 004512 235 PVR------------DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (748)
Q Consensus 235 p~r------------~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~ 302 (748)
|.. .-+-.++..||.|..-+..|++...+....-.|++. .+..+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235677888888888887764320000011110 01113457889999999999
Q ss_pred ccccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 303 FESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 303 f~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
|.+..... ...+....+++++ +++++|++|||+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 87642110 0011233455555 2568999999999999999999999998752 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
+|. |+. .+++++++++++... .|.+. +.++.+++..+|+.||+|++||..||||++.+|||+||
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~~~--------~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEHPE--------QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHCCC--------CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 873 221 245667777765321 25544 56888999999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-------CcEEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHH
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHEK 517 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~ 517 (748)
. |+|++..+|+.+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++
T Consensus 406 ~---------------------ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~ 464 (489)
T PRK14098 406 T---------------------IPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE 464 (489)
T ss_pred C---------------------CeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4 788899999887762 58999999999999999998743 22222222222
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHH
Q 004512 518 HYKYISSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 518 ~~~~V~~~~~~~W~~~fl~~l~~~ 541 (748)
. ..+.+++..=+++|++-.+++
T Consensus 465 ~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 465 A--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred H--hcCCCChHHHHHHHHHHHHHH
Confidence 2 225678888888887766554
No 26
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.92 E-value=3e-23 Score=237.00 Aligned_cols=292 Identities=18% Similarity=0.210 Sum_probs=201.8
Q ss_pred CCEEEEeCcchhhHHHHHHhhcc--CCeEEEEecCCCC----chhHhhcCcchH--------------H-HHHHhhhcCE
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFH--RVKVGFFLHSPFP----SSEIYRTLPVRD--------------E-ILKSLLNSDL 249 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~--~~~ig~flH~PfP----s~e~fr~lp~r~--------------~-il~~ll~~Dl 249 (748)
-|+||+||+|..++|.++++... ++|+.++.|...+ +.+.+..+.... . +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 48999999999999999988765 3899999998642 122222211110 1 1234566777
Q ss_pred EEeeCHHHHHHHHHHHHHHhCccccccCceeEEE--ecCeEEEEEEeeccCCcccccccccCc-----------hhHHHH
Q 004512 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQFESIMSLD-----------VTGQKV 316 (748)
Q Consensus 250 IgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~--~~gr~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~ 316 (748)
|...+..|++..... ..|. ++. +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 777777666554321 0000 000 011345788999999999987532100 011223
Q ss_pred HHHHHHcC-----CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004512 317 KELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (748)
Q Consensus 317 ~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 391 (748)
+.++++++ ++++|++|||+.+.||+..+++|++++.++. +.|+++|. |+ .++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45677762 6789999999999999999999999987542 44887773 22 2345667777654
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEE
Q 004512 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (748)
Q Consensus 392 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (748)
. +. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+||. |+|
T Consensus 344 ~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~---------------------pvI 393 (473)
T TIGR02095 344 Y----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT---------------------VPI 393 (473)
T ss_pred C----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC---------------------CeE
Confidence 3 21 255443 56788889999999999999999999999999999975 889
Q ss_pred EeCCCCcccccC---------CcEEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 472 VSEFIGCSPSLS---------GAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 472 ~Se~~G~~~~l~---------~ai~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
+|..+|..+.+. +|++++|.|++++|++|.+++.+ .++.++.+.++.. .+.+++..-++.+++-.+
T Consensus 394 ~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 394 VRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred EccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999999999882 38999999999999999999873 2333343333332 246888888888876554
No 27
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=2.2e-23 Score=238.13 Aligned_cols=295 Identities=17% Similarity=0.156 Sum_probs=194.1
Q ss_pred CEEEEeCcchhhHHHHHHhh-ccCCeEEEEecCC-----CCchhHhhc--Ccch-------------HHHHHHhhhcCEE
Q 004512 192 DYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSP-----FPSSEIYRT--LPVR-------------DEILKSLLNSDLI 250 (748)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~P-----fPs~e~fr~--lp~r-------------~~il~~ll~~DlI 250 (748)
||||+||+|..++|.+++.+ ..+++++++.|.. ||. ..+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 89999999999999998753 2467899999964 332 11111 1110 0123345666776
Q ss_pred EeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCc-------h----hHHHHHHH
Q 004512 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLD-------V----TGQKVKEL 319 (748)
Q Consensus 251 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~-------~----~~~~~~~l 319 (748)
.--+..|++...+.- .-.|++. .+..+..++.++|+|||++.|.+..... + .....+.+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 666666655433200 0000000 0011245788999999999987642100 0 01122456
Q ss_pred HHHcC-----CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc
Q 004512 320 KEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL 394 (748)
Q Consensus 320 r~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~ 394 (748)
+++++ +.++|++|||+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++.+.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~-- 348 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY-- 348 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC--
Confidence 66662 356888899999999999999999998753 3 34887773 22 23455666666543
Q ss_pred ccCCCCCccEEEecCCCChhhHHHHH-HhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe
Q 004512 395 NFGKPGYEPIVIIKEPLSTQDKVPYY-AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (748)
Q Consensus 395 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (748)
+. .++++.|. .+++..+| +.||+||+||.+||||++.+|||+||. |+|+|
T Consensus 349 --~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~---------------------ppVvs 399 (485)
T PRK14099 349 --PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGA---------------------VPVVA 399 (485)
T ss_pred --CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCC---------------------CcEEe
Confidence 21 25444454 67888877 569999999999999999999999975 66778
Q ss_pred CCCCccccc-C-----------CcEEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 474 EFIGCSPSL-S-----------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 474 e~~G~~~~l-~-----------~ai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
..+|..+.+ . +|++|+|.|++++|++|.+++. ..++.++.+.++.+ .+.++|..=++++++-.+
T Consensus 400 ~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~ 477 (485)
T PRK14099 400 RVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYR 477 (485)
T ss_pred CCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHH
Confidence 999988876 2 4899999999999999998532 12334444444443 367888888888887766
Q ss_pred HHHH
Q 004512 540 RACR 543 (748)
Q Consensus 540 ~~~~ 543 (748)
++..
T Consensus 478 ~l~~ 481 (485)
T PRK14099 478 SLVA 481 (485)
T ss_pred HHHh
Confidence 6543
No 28
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.92 E-value=2.1e-22 Score=224.77 Aligned_cols=287 Identities=16% Similarity=0.186 Sum_probs=210.4
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhc---Ccc--hHHHHH--HhhhcCEEEeeCHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT---LPV--RDEILK--SLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~---lp~--r~~il~--~ll~~DlIgF~t~~~~~~Fl~ 263 (748)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...+++ .+..+|.|.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999997666666666554 468899999975431111110 111 112222 345789999999888877654
Q ss_pred HHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004512 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (748)
Q Consensus 264 ~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (748)
. .+ ....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 12 1234678899999998886421 12234444 36789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG-KDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 419 (748)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++++.|.. ..|. +.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHH
Confidence 999999999999988873 466888886432 23 222 3455555554321 1255 5578999999999
Q ss_pred HHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHH
Q 004512 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (748)
Q Consensus 420 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~ 496 (748)
|+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|++++
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l 358 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT---------------------PVVAARVGGLPVAVADGETGLLVDGHDPADW 358 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC---------------------CEEEecCCCcHhhhccCCceEECCCCCHHHH
Confidence 9999999999999999999999999975 899999999888773 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 004512 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 541 (748)
|++|.++++.+ +++..+.++.+++++.+++...++.+++-+.++
T Consensus 359 a~~i~~~l~~~-~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 359 ADALARLLDDP-RTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999864 456666777888888899999999888776653
No 29
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=5.3e-23 Score=229.43 Aligned_cols=284 Identities=14% Similarity=0.127 Sum_probs=195.2
Q ss_pred CEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCc--hhH-hh-cCcc--------hHH---HHHHhhhcCEEEeeCHH
Q 004512 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS--SEI-YR-TLPV--------RDE---ILKSLLNSDLIGFHTFD 256 (748)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs--~e~-fr-~lp~--------r~~---il~~ll~~DlIgF~t~~ 256 (748)
|+|+.|. .+....++++.+|++++..+.|..+-. .+. |. ..+. +.. ....+..+|.|...+..
T Consensus 89 dvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~ 166 (396)
T cd03818 89 DVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRW 166 (396)
T ss_pred CEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHH
Confidence 8999994 455666799999999988777643311 110 10 0111 111 22446677877776654
Q ss_pred HHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEec
Q 004512 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVD 333 (748)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vd 333 (748)
....|.+ .. ..++.++|+|||.+.|.+... . ...++... .++++|+++|
T Consensus 167 ~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~~~i~~vg 218 (396)
T cd03818 167 QRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGDEVITFVA 218 (396)
T ss_pred HHhhCcH--------------------hh--ccceEEeCCCccccccCCCch---h---hhcccccccCCCCCeEEEEEC
Confidence 4433321 01 136788999999998875321 1 11112111 4678999999
Q ss_pred c-ccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004512 334 D-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (748)
Q Consensus 334 R-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~ 412 (748)
| +.+.||+..+++|+.++.+++|+++ |+++|......+..........+++.++++.+.+. ..|+| .|.++
T Consensus 219 R~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~V~f-~G~v~ 290 (396)
T cd03818 219 RNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---SRVHF-LGRVP 290 (396)
T ss_pred CCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc---ceEEE-eCCCC
Confidence 8 9999999999999999999899877 88888532111110000000112223333322221 23664 57899
Q ss_pred hhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeC
Q 004512 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVN 489 (748)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~Vn 489 (748)
.+++.++|+.||++++||..||+|++++||||||. |+|+|..+|..+.+. +|++|+
T Consensus 291 ~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~---------------------PVIas~~~g~~e~i~~~~~G~lv~ 349 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC---------------------LVVGSDTAPVREVITDGENGLLVD 349 (396)
T ss_pred HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC---------------------CEEEcCCCCchhhcccCCceEEcC
Confidence 99999999999999999999999999999999975 899999999888883 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHH
Q 004512 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSID 535 (748)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl 535 (748)
|.|++++|++|.++++++ +++..+.++.++++.+ +++..-+++|+
T Consensus 350 ~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 350 FFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999999876 4677778889999977 77766666654
No 30
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.91 E-value=2.6e-22 Score=224.91 Aligned_cols=275 Identities=16% Similarity=0.133 Sum_probs=201.2
Q ss_pred CCEEEEeCcchhhHHHHHHhh-ccCCeEEEEecCCCCc-hhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPS-SEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRM 268 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfPs-~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~ 268 (748)
.|+|+.|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 489999988876677777763 2244667788965211 11110 01112223345789888777654444321
Q ss_pred hCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHH
Q 004512 269 LGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348 (748)
Q Consensus 269 lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~ 348 (748)
+|. ...+|.++|+|||++.|.+... ....++..|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1236778999999998864211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEe
Q 004512 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVV 428 (748)
Q Consensus 349 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 428 (748)
..+.+++|+++ |+++| +|+.. +++++++++.+.. ..+.+.|.++.+++..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l~-------~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQLE-------DVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCCC-------CeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 88887 34433 4555565554321 23446689999999999999999999
Q ss_pred cCCC------ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHH
Q 004512 429 NCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADA 499 (748)
Q Consensus 429 tS~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~a 499 (748)
||.. |||+++.+|||+||. |+|+|..+|+.+.+. +|++|+|.|++++|++
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G~---------------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~a 363 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVGI---------------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQR 363 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCCC---------------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHH
Confidence 9984 999999999999975 899999999998883 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 004512 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (748)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~ 540 (748)
|.+++++++++++.+.++.++++. ++++...++.+.+-+++
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999777778888888999885 47998888888776653
No 31
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=8.2e-22 Score=231.20 Aligned_cols=339 Identities=12% Similarity=0.122 Sum_probs=212.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCC----CchhH-hhcC------c
Q 004512 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEI-YRTL------P 235 (748)
Q Consensus 167 ~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----Ps~e~-fr~l------p 235 (748)
+.|..-..++...++.+.......-|+|+.|.+.--++...++++. +++..++.|..= +.+.. +... .
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 3455555555555555544433224899999988878888887765 688888888541 11110 1101 0
Q ss_pred ch-HHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccc-cccCceeEEEe--cCeEEEEEEeeccCCcccccccccCch
Q 004512 236 VR-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNY-ESKRGYIGLDY--FGRTVSIKILPVGIHMGQFESIMSLDV 311 (748)
Q Consensus 236 ~r-~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~-~~~~g~~~i~~--~gr~~~i~v~p~GId~~~f~~~~~~~~ 311 (748)
.+ +.-+..|-.||.|.-.|+.....-...+. ..+.-. -+..+...+.. +....++.++|+|+|++.|.+......
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~-qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~ 519 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVG-QYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEK 519 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhh-hhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhh
Confidence 11 00124567799999888644321111110 000000 00001111110 111237889999999999876432110
Q ss_pred hH-HHH----------HHHHHHc-----CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC--
Q 004512 312 TG-QKV----------KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS-- 373 (748)
Q Consensus 312 ~~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~-- 373 (748)
.. ... ...++.+ .++++|++|||+++.||+..+++||.++.+..+ .+.||+||++...
T Consensus 520 r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~ 595 (784)
T TIGR02470 520 RLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKE 595 (784)
T ss_pred hhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccccc
Confidence 00 000 0112333 368999999999999999999999987644333 3558888864321
Q ss_pred -CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH-h---CcEEEecCCCccCCchhhhhhhhccC
Q 004512 374 -SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA-I---AECCVVNCVRDGMNLVPYKYTVSRQG 448 (748)
Q Consensus 374 -~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~-~---ADv~vvtS~~EGmnLv~~Eama~~~~ 448 (748)
...+..+..+++.+++++.+.. + .|.+++...+..+...+|+ + +||||+||.+|||||+++||||||.
T Consensus 596 s~d~ee~~~i~~L~~la~~~gL~----g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGl- 668 (784)
T TIGR02470 596 SKDREEQAEIEKMHNLIDQYQLH----G--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGL- 668 (784)
T ss_pred ccchhHHHHHHHHHHHHHHhCCC----C--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCC-
Confidence 1112223345666777664322 2 3666543346667777776 2 4699999999999999999999975
Q ss_pred CCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH
Q 004512 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRHEKHYKYI 522 (748)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~V 522 (748)
|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++++++|
T Consensus 669 --------------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV 728 (784)
T TIGR02470 669 --------------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI 728 (784)
T ss_pred --------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 899999999999883 5999999999999999999874 23446666677788887
Q ss_pred -HhCCHHHHHHHHHHHH
Q 004512 523 -SSHDVAYWAKSIDQDL 538 (748)
Q Consensus 523 -~~~~~~~W~~~fl~~l 538 (748)
+.++|...++.+++..
T Consensus 729 ~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 729 YEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 4589999888887654
No 32
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.90 E-value=1.5e-21 Score=216.09 Aligned_cols=284 Identities=14% Similarity=0.103 Sum_probs=204.7
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhh-----cCcchHHH-HHHhhhcCEEEeeCHHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----TLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSS 264 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr-----~lp~r~~i-l~~ll~~DlIgF~t~~~~~~Fl~~ 264 (748)
.|+|++|++...+.+.+++ +..++|+.+++|..+|...... .......+ ...+..+|.|...+....+.+.+.
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 5999999988766555544 4467899999998765321100 00011111 123456788888887666665431
Q ss_pred HHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCH
Q 004512 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (748)
Q Consensus 265 ~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (748)
- -+ -...++.++|+|+|++.+.+.. ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 0124678899999998876421 12334444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004512 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (748)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (748)
..+++|++++. ++++ |+++|.. ++..++.+++++++..++...+ .|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNRT-----GIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccccC-----ceEEecCCCCHHHHHHHHH
Confidence 99999999873 3443 6666532 2223455666666665543221 3777888899999999999
Q ss_pred hCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH-----
Q 004512 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV----- 493 (748)
Q Consensus 422 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~----- 493 (748)
.|||+|+||..||||++.+|||+||. |+|+|..+|..+.+. +|++++|.|.
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~---------------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT---------------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC---------------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 99999999999999999999999975 899999999888773 4899999999
Q ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 004512 494 -DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (748)
Q Consensus 494 -~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 540 (748)
++++++|.++++.+ ++++.+.++.++++ +++++..+++++++.+++
T Consensus 339 ~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 339 QAELAKAINILLADP-ELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999864 46666777788777 468999999998877665
No 33
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=6.7e-22 Score=220.81 Aligned_cols=276 Identities=13% Similarity=0.164 Sum_probs=196.2
Q ss_pred CEEEEeCcchhhH-HHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHH-hhhcCEEEeeCHHHHHHHHHHHHHHh
Q 004512 192 DYVWIHDYHLMVL-PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARHFLSSCSRML 269 (748)
Q Consensus 192 DiVwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~-ll~~DlIgF~t~~~~~~Fl~~~~r~l 269 (748)
|+|++|+++.... ...+-.+..++|++++.|..|+..+... .....+.+. +-.+|.|.+.+....+.+... .
T Consensus 90 DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----~ 163 (398)
T cd03796 90 TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR----A 163 (398)
T ss_pred CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH----h
Confidence 8999999775433 3333334456899999998765332211 011222222 356788888887666554321 0
Q ss_pred CccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHH
Q 004512 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (748)
Q Consensus 270 g~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (748)
+ ....++.++|+|+|++.|.+... . ..+++++|+++||+.+.||+..+++|+.
T Consensus 164 ~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~li~a~~ 216 (398)
T cd03796 164 S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDLLVGIIP 216 (398)
T ss_pred C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHHHHHHHH
Confidence 1 11346788999999988864311 0 1256789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEec
Q 004512 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (748)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (748)
.+.+++|+++ |+++|. ++.. +++++++++.+. .+ .|.+ .|.++.+++.++|+.||++++|
T Consensus 217 ~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~l----~~--~v~~-~G~~~~~~~~~~l~~ad~~v~p 276 (398)
T cd03796 217 EICKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYNL----QD--RVEL-LGAVPHERVRDVLVQGHIFLNT 276 (398)
T ss_pred HHHhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhCC----CC--eEEE-eCCCCHHHHHHHHHhCCEEEeC
Confidence 9988888876 887773 3333 334455544321 11 3665 4789999999999999999999
Q ss_pred CCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C-cEEeCCCCHHHHHHHHHHHhcCC
Q 004512 430 CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G-AIRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 430 S~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~VnP~d~~~~A~ai~~aL~m~ 507 (748)
|..||||++.+||||||. |+|+|..+|..+.+. + +++++| |+++++++|.++++++
T Consensus 277 S~~E~~g~~~~EAma~G~---------------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 277 SLTEAFCIAIVEAASCGL---------------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred ChhhccCHHHHHHHHcCC---------------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhCh
Confidence 999999999999999975 899999999988873 4 445555 9999999999999976
Q ss_pred HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 004512 508 NQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACR 543 (748)
Q Consensus 508 ~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~~~ 543 (748)
.+. ....++.++++ +++++..=++++++..+++..
T Consensus 335 ~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 335 RTG-KHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hhh-hhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 533 34455566655 457888889988888777543
No 34
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.90 E-value=6.8e-22 Score=225.46 Aligned_cols=282 Identities=15% Similarity=0.196 Sum_probs=199.7
Q ss_pred HHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcch-H---HHHHH-hhhcCEEEeeCHHHH
Q 004512 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-D---EILKS-LLNSDLIGFHTFDYA 258 (748)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r-~---~il~~-ll~~DlIgF~t~~~~ 258 (748)
++..+| |+|++|+...+.++.++-.+..++|+++++|.-+|..--....++. + .+.+. ...+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 333455 8999998766655554433345788998888765432110001110 0 11122 235788888877666
Q ss_pred HHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc----CCceEEEEecc
Q 004512 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF----DGKIVILGVDD 334 (748)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdR 334 (748)
+.+... +. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 665421 10 012367889999999988654221 1233333 36789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChh
Q 004512 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (748)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~ 414 (748)
+.+.||+..+++|++++ |+++ |+++| +|+.. ++++++++.. +|+| .|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~f-~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTVF-TGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeEE-eccCCHH
Confidence 99999999999988654 5554 88887 34433 3445544321 3664 5789999
Q ss_pred hHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC------CcEEe
Q 004512 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------GAIRV 488 (748)
Q Consensus 415 el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~V 488 (748)
|+..+|+.||++|+||..||||++++||||||. |+|+|..+|+.+.+. +|+++
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~---------------------PVI~s~~gg~~eiv~~~~~~~~G~lv 382 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASGV---------------------PVVAARAGGIPDIIPPDQEGKTGFLY 382 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcCC---------------------CEEEcCCCCcHhhhhcCCCCCceEEe
Confidence 999999999999999999999999999999975 899999999888773 38999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHH
Q 004512 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD-LERACR 543 (748)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~-l~~~~~ 543 (748)
+|.|++++|++|.++++.+ +.++.+.++.+++++++++...++.+++. ..++..
T Consensus 383 ~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 383 TPGDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred CCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 46677778889999999999999999874 444443
No 35
>PLN00142 sucrose synthase
Probab=99.90 E-value=1.2e-21 Score=229.82 Aligned_cols=329 Identities=15% Similarity=0.166 Sum_probs=208.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCC-----------CCch-hHhhcC
Q 004512 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP-----------FPSS-EIYRTL 234 (748)
Q Consensus 167 ~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~P-----------fPs~-e~fr~l 234 (748)
+.|..-.+++...++.+....+..-|+|+-|++.--++...|+++. ++|.+++.|+- |... +-|+..
T Consensus 385 ~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~ 463 (815)
T PLN00142 385 DVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFS 463 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhh
Confidence 4566666666666655544333123999999887778888888775 78999999942 1110 111110
Q ss_pred -cchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccC-----c----eeEEEecCeEEEEEEeeccCCccccc
Q 004512 235 -PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR-----G----YIGLDYFGRTVSIKILPVGIHMGQFE 304 (748)
Q Consensus 235 -p~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~-----g----~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (748)
....|. ..|..||.|.-.|+......-. ++ + .|.+-. + .-++++.. -++.++|+|+|...|.
T Consensus 464 ~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F~ 535 (815)
T PLN00142 464 CQFTADL-IAMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYF 535 (815)
T ss_pred hchHHHH-HHHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhcC
Confidence 011121 2455677766555433321100 00 0 000000 0 00122222 2788899999999887
Q ss_pred ccccCchhHHHH-------H-------HHHHHc-----CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEE
Q 004512 305 SIMSLDVTGQKV-------K-------ELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (748)
Q Consensus 305 ~~~~~~~~~~~~-------~-------~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 365 (748)
+.... ..+. . ..++.+ .++++|++|||+++.||+..+++||.++.+..+++ .|+
T Consensus 536 P~~~~---~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LV 608 (815)
T PLN00142 536 PYTEK---QKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLV 608 (815)
T ss_pred CCChH---HhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEE
Confidence 53210 0110 0 011112 35779999999999999999999999886666554 488
Q ss_pred EEecCC-CCCchhH--HHHHHHHHHHHHHHhcccCCCCCccEEEecC---CCChhhHHHHHH-hCcEEEecCCCccCCch
Q 004512 366 QITNPA-RSSGKDV--QDLLSDTNRIAEEINLNFGKPGYEPIVIIKE---PLSTQDKVPYYA-IAECCVVNCVRDGMNLV 438 (748)
Q Consensus 366 qi~~p~-r~~~~~~--~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~~EGmnLv 438 (748)
+||++. .....+. .+..+++.+++++.+.. + .|.+++. ..+..+++.+|+ ++|+||+||.+||||++
T Consensus 609 IVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLv 682 (815)
T PLN00142 609 VVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLT 682 (815)
T ss_pred EEECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHH
Confidence 888541 1111111 12224566666654322 2 3665542 345577888777 57999999999999999
Q ss_pred hhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhc---CCHHHHH
Q 004512 439 PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKI 512 (748)
Q Consensus 439 ~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~---m~~~er~ 512 (748)
++||||||. |+|+|..+|+.+.+. +|++|+|.|++++|++|.+++. ..++.++
T Consensus 683 vLEAMA~Gl---------------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~ 741 (815)
T PLN00142 683 VVEAMTCGL---------------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWN 741 (815)
T ss_pred HHHHHHcCC---------------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 999999975 899999999999883 4999999999999999988763 3455667
Q ss_pred HHHHHHHHHH-HhCCHHHHHHHHHHHH
Q 004512 513 LRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (748)
Q Consensus 513 ~r~~~~~~~V-~~~~~~~W~~~fl~~l 538 (748)
...+++++++ ++++|...++++++-.
T Consensus 742 ~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 742 KISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7777788888 5689999888887644
No 36
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.90 E-value=1.2e-21 Score=223.86 Aligned_cols=311 Identities=17% Similarity=0.193 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhc-----cCCeEEEEecCCCCch----hHhhcC--cc--
Q 004512 170 QAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-----HRVKVGFFLHSPFPSS----EIYRTL--PV-- 236 (748)
Q Consensus 170 ~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~ig~flH~PfPs~----e~fr~l--p~-- 236 (748)
..|...++...+.+... ...-|+|++||+|..++|.++++.. .++|+.|+.|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 110 ERFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 34444444444444332 1234999999999999999998874 5789999999874321 111111 11
Q ss_pred -----------h-HHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEE--ecCeEEEEEEeeccCCccc
Q 004512 237 -----------R-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQ 302 (748)
Q Consensus 237 -----------r-~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~--~~gr~~~i~v~p~GId~~~ 302 (748)
. .-+..++..||.|...+..|++...+.- .| . ++. ...+..++.++|+|||.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~------~---gl~~~~~~~~~ki~~I~NGid~~~ 256 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG------E---GLDGLLRARAGKLSGILNGIDYDV 256 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC------c---chHHHHHhccCCeEEEeCCCcCcc
Confidence 0 1222345667777777776666543210 00 0 000 1122357889999999998
Q ss_pred ccccccCc-----------hhHHHHHHHHHHc-----CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 303 FESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 303 f~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.++. +.|++
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi 330 (476)
T cd03791 257 WNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVI 330 (476)
T ss_pred cCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEE
Confidence 87642210 0112234566666 36789999999999999999999999987643 44777
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
+|.. + .++.+++++++.+.. ..|+++.+ .+.++...+|+.||++++||..||||++.+|||+||
T Consensus 331 ~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 331 LGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred EecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 7732 1 234556666665431 13666654 457778899999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHH
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILRH 515 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~ 515 (748)
. |+|+|..+|..+.+ + +|++++|.|+++++++|.+++++. ++++..+.
T Consensus 395 ~---------------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~ 453 (476)
T cd03791 395 T---------------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQ 453 (476)
T ss_pred C---------------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 5 78999999999988 3 599999999999999999998743 23333333
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Q 004512 516 EKHYKYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 516 ~~~~~~V~~~~~~~W~~~fl~~l 538 (748)
++..+ ..+++..-++++++..
T Consensus 454 ~~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 454 RNAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHHhc--cCCChHHHHHHHHHHH
Confidence 33322 3467777777776543
No 37
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.89 E-value=3.9e-21 Score=212.36 Aligned_cols=285 Identities=18% Similarity=0.167 Sum_probs=203.5
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhH--hhc---Ccc-hHHH-HHHhhhcCEEEeeCHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI--YRT---LPV-RDEI-LKSLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~--fr~---lp~-r~~i-l~~ll~~DlIgF~t~~~~~~Fl~ 263 (748)
.|+|++|++....++..+.+. .++++.++.|........ ... .+. +..+ ...+..+|.|.+.+......+..
T Consensus 102 ~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 180 (398)
T cd03800 102 PDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYS 180 (398)
T ss_pred ccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHH
Confidence 399999998777766666554 478899999976432110 000 000 1111 22356789999998877666543
Q ss_pred HHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHH
Q 004512 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISL 343 (748)
Q Consensus 264 ~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~ 343 (748)
. .+ ....++.++|+|+|.+.|.+.... ....+.+. ...++.+|+++||+++.||+..
T Consensus 181 ~----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~ 237 (398)
T cd03800 181 L----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDT 237 (398)
T ss_pred H----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHH
Confidence 1 11 112247889999999888653211 11111111 1146789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC
Q 004512 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (748)
Q Consensus 344 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 423 (748)
+++|+..+.+++|+++ |+++|...... ......+++.++++.+.. ..|. +.+.++.+++..+|+.|
T Consensus 238 ll~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~a 303 (398)
T cd03800 238 LIRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAA 303 (398)
T ss_pred HHHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhC
Confidence 9999999988877765 88888543221 122234456666554322 1355 45799999999999999
Q ss_pred cEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHH
Q 004512 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAM 500 (748)
Q Consensus 424 Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai 500 (748)
|++++||..||||++++|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|
T Consensus 304 di~l~ps~~e~~~~~l~Ea~a~G~---------------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i 362 (398)
T cd03800 304 DVFVNPALYEPFGLTALEAMACGL---------------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAAL 362 (398)
T ss_pred CEEEecccccccCcHHHHHHhcCC---------------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHH
Confidence 999999999999999999999975 899999999988883 48999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 004512 501 DSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (748)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl 535 (748)
.++++++ ++++.+.++.++++ +.+++...++.|+
T Consensus 363 ~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 363 RRLLTDP-ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999874 46677777888888 6789998888775
No 38
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.89 E-value=7.1e-21 Score=210.01 Aligned_cols=231 Identities=13% Similarity=0.123 Sum_probs=172.2
Q ss_pred hcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--
Q 004512 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (748)
Q Consensus 246 ~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 323 (748)
.+|.+...+....+.+... .+. ...++.++|+|||.+.|.+.... .....++.+
T Consensus 136 ~~~~~i~vs~~~~~~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~ 191 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRGD-----RSPILPPDFFA 191 (374)
T ss_pred cCCeEEEeCHHHHHHHHHh----cCC---------------ChhhEEEeccCccccccCCCccc-----hhhhhHhhcCC
Confidence 3677777777666555431 121 13467789999999888643211 111112222
Q ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004512 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~p 403 (748)
.++.+|+++||+++.||+..+++|+..+++++|+...++.|+++|. |+.. +++++++++.+. ..
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cc
Confidence 4678999999999999999999999999999987656677998873 3332 344455444332 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
.+++.| +.+++..+|+.||++|+||..||||++++|||+||. |+|+|..+|..+.+.
T Consensus 256 ~v~~~g--~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~---------------------Pvv~s~~~g~~e~i~ 312 (374)
T TIGR03088 256 LVWLPG--ERDDVPALMQALDLFVLPSLAEGISNTILEAMASGL---------------------PVIATAVGGNPELVQ 312 (374)
T ss_pred eEEEcC--CcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC---------------------CEEEcCCCCcHHHhc
Confidence 445555 367899999999999999999999999999999975 899999999998883
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 004512 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (748)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 540 (748)
+|++++|.|++++|++|.++++.+ +++..+.+++++++ ..+++..-++.+.+..++
T Consensus 313 ~~~~g~~~~~~d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 313 HGVTGALVPPGDAVALARALQPYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 489999999999999999999864 45666777888887 468988888888766554
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.89 E-value=6.8e-22 Score=226.04 Aligned_cols=276 Identities=14% Similarity=0.123 Sum_probs=196.9
Q ss_pred CCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCch---hHhhc---CcchHH--------HHH-HhhhcCEEEee
Q 004512 189 PDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT---LPVRDE--------ILK-SLLNSDLIGFH 253 (748)
Q Consensus 189 ~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~---e~fr~---lp~r~~--------il~-~ll~~DlIgF~ 253 (748)
++.|+||+|......++..+.++..++|+.++.|--++.. +++.. .+..+. +.+ ....||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3569999998766655555555556899999999766532 22211 000011 111 12345666555
Q ss_pred CHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEec
Q 004512 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVD 333 (748)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 333 (748)
+....+... .++....++.++|+|||.+.|.+... . ....++++|+++|
T Consensus 252 s~~~~~~~~--------------------~~g~~~~ki~vIpNgid~~~f~~~~~--------~---~~~~~~~~i~~vG 300 (475)
T cd03813 252 YEGNRERQI--------------------EDGADPEKIRVIPNGIDPERFAPARR--------A---RPEKEPPVVGLIG 300 (475)
T ss_pred CHHHHHHHH--------------------HcCCCHHHeEEeCCCcCHHHcCCccc--------c---ccCCCCcEEEEEe
Confidence 443222111 11122346788999999998865311 0 1124678999999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCCh
Q 004512 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413 (748)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~ 413 (748)
|+.+.||+..+++|+..+.++.|+++ |+++|.. ++..++.+++++++++.|.. + .|.++ | .
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~li~~l~l~----~--~V~f~-G---~ 361 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECRELVESLGLE----D--NVKFT-G---F 361 (475)
T ss_pred ccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHHHHHhCCC----C--eEEEc-C---C
Confidence 99999999999999999998888876 8877732 22235667788888776532 1 36655 4 6
Q ss_pred hhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--------C
Q 004512 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------G 484 (748)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ 484 (748)
+++..+|+.||++|+||..|||+++++||||||. |+|+|..+|+.+.+ + +
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~---------------------PVVatd~g~~~elv~~~~~~~~g~~ 420 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI---------------------PVVATDVGSCRELIEGADDEALGPA 420 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC---------------------CEEECCCCChHHHhcCCcccccCCc
Confidence 7899999999999999999999999999999975 89999999998877 3 4
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHH
Q 004512 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQ 536 (748)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~ 536 (748)
|++++|.|++++|++|.++++++ +.++.+.+++++++.+ +++...+++|.+
T Consensus 421 G~lv~~~d~~~la~ai~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 421 GEVVPPADPEALARAILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred eEEECCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999999999999865 4677777888888877 466777776664
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.88 E-value=1.4e-20 Score=204.65 Aligned_cols=280 Identities=18% Similarity=0.224 Sum_probs=199.0
Q ss_pred HHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHh-hhcCEEEeeCHHHHHH
Q 004512 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARH 260 (748)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~l-l~~DlIgF~t~~~~~~ 260 (748)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455565 899999999888888887776777888888865332111 11111111 1245555555555555
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~ 337 (748)
|+... + -...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 44310 0 0123678899999998775421 1123455555 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004512 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (748)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~ 417 (748)
.||+..+++|+.++.+++|+++ |+++|. ++..+ ++++.+.+.|.. ..|.++ +. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRA----TLERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHH----HHHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999998888766 887773 33333 344444443321 135654 43 46899
Q ss_pred HHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHH
Q 004512 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAV 496 (748)
Q Consensus 418 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~ 496 (748)
.+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|+.++|.|++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~---------------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~ 316 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL---------------------PVVATDAGGVREVVGDSGLIVPISDPEAL 316 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC---------------------CEEEecCCChhhEecCCceEeCCCCHHHH
Confidence 999999999999999999999999999975 899999988888884 6899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Q 004512 497 ADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (748)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 538 (748)
|++|.++++++++.+..+.+. ++++ +.+++..+++.|.+-+
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 999999998877666666555 5544 5689999999887654
No 41
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=1.9e-20 Score=204.99 Aligned_cols=274 Identities=17% Similarity=0.158 Sum_probs=194.1
Q ss_pred HHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCC----CchhHhhcCcchHHHHHH-hhhcCEEEeeCHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDY 257 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----Ps~e~fr~lp~r~~il~~-ll~~DlIgF~t~~~ 257 (748)
+++..+| |+|++|+.+..+....+.++ .++|+.+.+|... +.............+.+. +..+|.|.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 89999977644443333333 4688888888432 111111000011122222 35679998888765
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (748)
.+.+.+. |. ...++.++|+|+|.+.|.+... -.++++++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 5555431 21 1235778999999987754210 134678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004512 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (748)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~ 417 (748)
.||+..+++|+..+.+++|+++ |+++|. ++. .++++.++++.+.. + .|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~~~~----~--~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARALGLG----G--RVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHcCCC----C--eEE-ECCCCCHHHHH
Confidence 9999999999999998888766 888873 332 23455555553211 1 255 55789999999
Q ss_pred HHHHhCcEEEecCC------CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEe
Q 004512 418 PYYAIAECCVVNCV------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (748)
Q Consensus 418 aly~~ADv~vvtS~------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~V 488 (748)
.+|+.||++++||. .|||+++++|||+||. |+|+|+.+|..+.+. +|+++
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~ 318 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV---------------------PVVATRHGGIPEAVEDGETGLLV 318 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC---------------------CEEEeCCCCchhheecCCeeEEE
Confidence 99999999999997 5999999999999975 899999999988773 58999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Q 004512 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (748)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl 535 (748)
+|.|+++++++|.++++++ +.+..+..++++++. .+++..+++.+.
T Consensus 319 ~~~d~~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 319 PEGDVAALAAALGRLLADP-DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999999864 356666777888885 689888888765
No 42
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.87 E-value=3.9e-20 Score=201.19 Aligned_cols=268 Identities=16% Similarity=0.222 Sum_probs=194.4
Q ss_pred HHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHH
Q 004512 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (748)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~ 264 (748)
+..++ |+|++|..+...+..++.+ ..++++.+.+|-.++....+ .. .+..+|.+.+.+....+.+..
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~---~~~~~~~vi~~s~~~~~~~~~- 141 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NA---IMARGDRVIAVSNFIADHIRE- 141 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HH---HHHhcCEEEEeCHHHHHHHHH-
Confidence 34454 8999998776555544444 34789999999776543211 12 244689888877655544431
Q ss_pred HHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCH
Q 004512 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (748)
Q Consensus 265 ~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 341 (748)
..+. ...++.++|+|||...|.+....+ .....+++++ .++++++++||+.+.||+
T Consensus 142 ---~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 142 ---NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred ---hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 1221 124678899999999886532211 1122245555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004512 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (748)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (748)
..+++|+..+.+++++++ |+++|.. +..+.+.+++.+.+.+.+.. + .|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~-----~~~~~~~~~~~~~~~~~~~~----~--~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDA-----QGRRFYYAELLELIKRLGLQ----D--RVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECC-----cccchHHHHHHHHHHHcCCc----c--eEEEcC-C--cccHHHHHH
Confidence 999999999988767665 8888843 22234445555555543221 1 366554 4 779999999
Q ss_pred hCcEEEecC-CCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004512 422 IAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (748)
Q Consensus 422 ~ADv~vvtS-~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (748)
.||++++|| ..||||++.+|||+||. |+|+|..+|..+.+. +|++++|.|+++++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~ 321 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGR---------------------PVIASDHGGARETVRPGETGLLVPPGDAEALA 321 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCC---------------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHH
Confidence 999999999 78999999999999975 889999888887773 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHhC
Q 004512 498 DAMDSALQMENQEKILRHEKHYKYISSH 525 (748)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~V~~~ 525 (748)
++|..++..++++++...+++++++.++
T Consensus 322 ~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 322 QALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 9999999888888888888999998764
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.87 E-value=3.4e-20 Score=208.74 Aligned_cols=272 Identities=14% Similarity=0.139 Sum_probs=182.2
Q ss_pred CCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcc-------------hH--HH-----------H
Q 004512 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV-------------RD--EI-----------L 241 (748)
Q Consensus 188 ~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~-------------r~--~i-----------l 241 (748)
.| |+|..|--+...+ .+.+.++++|+++.+|-|.-+++.+..+-. +. .+ +
T Consensus 107 ~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6554442233322 345556789999999955434454422111 11 01 1
Q ss_pred H--HhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHH
Q 004512 242 K--SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKEL 319 (748)
Q Consensus 242 ~--~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~l 319 (748)
. .+-.||.|...+....+++.+ ..+ ...++.++++|+|++.|.+...
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhccccc-----------
Confidence 1 134567777776644444432 111 1125678899999987754210
Q ss_pred HHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004512 320 KEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (748)
Q Consensus 320 r~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~ 398 (748)
....++.+|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+..
T Consensus 232 -~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~--- 304 (419)
T cd03806 232 -DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE--- 304 (419)
T ss_pred -ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC---
Confidence 012456799999999999999999999999999887631 2356888885321 11234566777777775432
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc
Q 004512 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (748)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (748)
+ .|+|+ +.++.+++..+|+.||+++.||..||||++++||||||. |+|+|..+|.
T Consensus 305 -~--~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~---------------------pvIa~~~ggp 359 (419)
T cd03806 305 -D--KVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL---------------------IPLAHASGGP 359 (419)
T ss_pred -C--eEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC---------------------cEEEEcCCCC
Confidence 1 36654 689999999999999999999999999999999999974 7889988786
Q ss_pred cc-ccC------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHH
Q 004512 479 SP-SLS------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (748)
Q Consensus 479 ~~-~l~------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~ 528 (748)
.+ .+. +|++++ |++++|++|.+++++++++++.+.+..++...+++..
T Consensus 360 ~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 360 LLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred chheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 54 343 488874 9999999999999998766665444444444455544
No 44
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.87 E-value=1e-19 Score=199.51 Aligned_cols=285 Identities=14% Similarity=0.157 Sum_probs=196.8
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhc---cCCeEEEEecCCCCchhHhhcCcchH-HHHHHhhhcCEEEe
Q 004512 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF---HRVKVGFFLHSPFPSSEIYRTLPVRD-EILKSLLNSDLIGF 252 (748)
Q Consensus 177 ~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~---~~~~ig~flH~PfPs~e~fr~lp~r~-~il~~ll~~DlIgF 252 (748)
+.+.+.+ +..+| |+|++|++....++..+..+. .++++.+++|..-.. .....+... -+...+..+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 3444444 44455 899999876555555554332 267888888853110 011112112 22334567899999
Q ss_pred eCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEE
Q 004512 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVI 329 (748)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 329 (748)
.+....+.+.... + ...++.++|+|+|...|.+... ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEE
Confidence 9987766654311 1 1225778999999887754211 1223344 468899
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecC
Q 004512 330 LGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409 (748)
Q Consensus 330 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~ 409 (748)
+++||+.+.||+..+++|++++.++ ++++ |+++|. +++.. ++++++.+.+. .+ .|++++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~----~~~~~~~~~~~----~~--~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERS----PAERLARELGL----QD--DVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHH----HHHHHHHHcCC----Cc--eEEEec-
Confidence 9999999999999999999988654 3344 777773 33333 33444444322 11 366554
Q ss_pred CCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcE
Q 004512 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI 486 (748)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai 486 (748)
. .+++..+|+.||++++||..||||++++|||+||. |+|+|+.+|..+.+. +|+
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~---------------------PvI~s~~~~~~e~i~~~~~G~ 316 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGV---------------------PVVASNAGGIPEVVKHGETGF 316 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC---------------------CEEEeCCCCchhhhcCCCceE
Confidence 3 45899999999999999999999999999999975 899999999988873 489
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHH
Q 004512 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~W~~~fl~~l~ 539 (748)
+++|.|++++|++|..+++++ +++..+.++++++ ...+++...++.+.+.++
T Consensus 317 ~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 317 LVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred EcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999864 4566667778887 456888888888876654
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.86 E-value=6.7e-20 Score=199.59 Aligned_cols=257 Identities=13% Similarity=0.115 Sum_probs=176.4
Q ss_pred HHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHH-HHhhhcCEEEeeCHHHHHHHH
Q 004512 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFL 262 (748)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il-~~ll~~DlIgF~t~~~~~~Fl 262 (748)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+...+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 333444 89999998877777777666555556777887765433222111110111 112346776666655444433
Q ss_pred HHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccC
Q 004512 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFK 339 (748)
Q Consensus 263 ~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 339 (748)
.. ....++.++|+|+|...+..... ..+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 20 01236788999999988754311 111 1 2222 4688999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004512 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (748)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 419 (748)
|+..+++|+..+.+++|+++ |+++|. ++..+ ++++.+++.+ .. ..|.++ |. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~----~~~~~~~~~~----~~--~~v~~~-g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEE----EIKKKVKELG----LE--DKVIFL-GV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHH----HHHHHHHhcC----CC--CcEEEe-cc--cCCHHHH
Confidence 99999999999999998876 888873 34333 3344443322 11 136655 44 6789999
Q ss_pred HHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHH
Q 004512 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVA 497 (748)
Q Consensus 420 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A 497 (748)
|+.||++|+||..||||++++||||||. |+|+|+.+|..+.+. ++++..+.+++++|
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~---------------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a 322 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL---------------------PCILSDTITKEVDLTDLVKFLSLDESPEIWA 322 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC---------------------CEEEEcCCchhhhhccCccEEeCCCCHHHHH
Confidence 9999999999999999999999999975 899999999988884 35666666789999
Q ss_pred HHHHHHhcCCHHHHHH
Q 004512 498 DAMDSALQMENQEKIL 513 (748)
Q Consensus 498 ~ai~~aL~m~~~er~~ 513 (748)
++|.+++++++..++.
T Consensus 323 ~~i~~l~~~~~~~~~~ 338 (358)
T cd03812 323 EEILKLKSEDRRERSS 338 (358)
T ss_pred HHHHHHHhCcchhhhh
Confidence 9999999998754443
No 46
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.86 E-value=2.1e-19 Score=201.45 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=197.0
Q ss_pred CCEEEEeCcchhh-HHHHHHhhccCCeEEEEecCCCCchhHhh-cCc--chHH----HHHH-hhhcCEEEeeCHHHHHHH
Q 004512 191 EDYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSPFPSSEIYR-TLP--VRDE----ILKS-LLNSDLIGFHTFDYARHF 261 (748)
Q Consensus 191 ~DiVwvhDyhl~l-lp~~lr~~~~~~~ig~flH~PfPs~e~fr-~lp--~r~~----il~~-ll~~DlIgF~t~~~~~~F 261 (748)
.|+||+|...+.. ...++-.+..+.++++..|--||..-+-. ..+ .... +.+. +..+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 3999999866542 22333333445678887876565321100 010 0011 1111 345888888888776665
Q ss_pred HHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEecccccc
Q 004512 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (748)
Q Consensus 262 l~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 338 (748)
.+ .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.
T Consensus 187 ~~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 12 12346888999999988865321 1123455666 356899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHH
Q 004512 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (748)
Q Consensus 339 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 418 (748)
||+..+++|++++ +++|+++ |+++| +|+.. +++++++++.+. ..|+|+ |.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~----~~l~~~~~~~~l-------~~v~f~-G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICG-----QGGGK----ARLEKMAQCRGL-------PNVHFL-PLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhH----HHHHHHHHHcCC-------CceEEe-CCCCHHHHHH
Confidence 9999999999876 4566554 88777 34433 345555554332 136654 6899999999
Q ss_pred HHHhCcEEEecCCCccCCch----hhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc--cccc-CCcEEeCCC
Q 004512 419 YYAIAECCVVNCVRDGMNLV----PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL-SGAIRVNPW 491 (748)
Q Consensus 419 ly~~ADv~vvtS~~EGmnLv----~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~VnP~ 491 (748)
+|+.||++++||..|+++++ .+|||+||. |+|+|..+|. .+.+ .+|++++|.
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~---------------------PVi~s~~~g~~~~~~i~~~G~~~~~~ 358 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGR---------------------NVVATAEPGTELGQLVEGIGVCVEPE 358 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcCC---------------------CEEEEeCCCchHHHHHhCCcEEeCCC
Confidence 99999999999999996544 699999975 8899988774 3444 579999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Q 004512 492 NVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~~ 541 (748)
|++++|++|.++++++ +++..+.++.++++. .+++...+++|++.+++.
T Consensus 359 d~~~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 359 SVEALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred CHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9999999999999875 467777888899886 589999999999888765
No 47
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.86 E-value=8.7e-20 Score=202.18 Aligned_cols=281 Identities=16% Similarity=0.154 Sum_probs=188.4
Q ss_pred CCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHH---------HhhhcCEEEeeCHHHHHH
Q 004512 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK---------SLLNSDLIGFHTFDYARH 260 (748)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~---------~ll~~DlIgF~t~~~~~~ 260 (748)
..|+|++|+..... + +++.. ...++.++.|.| .......-..-..+.+ .+..+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~~-~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSACV-P-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchHH-H-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 35999999866432 2 23322 237899999944 2211110011111111 134478877766654443
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (748)
+.. .++. .....+.++|+|||.+.|.+....+ ..+......++.+|+++||+.+.||
T Consensus 169 ~~~----~~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKK----TFPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHH----Hhcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 332 1110 0011235789999998886532110 0111112257789999999999999
Q ss_pred HHHHHHHHHHHHHhC---CCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCCccEEEecCCCChhhH
Q 004512 341 ISLKFLAMGQLLEQH---PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE-INLNFGKPGYEPIVIIKEPLSTQDK 416 (748)
Q Consensus 341 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~-IN~~~g~~~~~pV~~~~~~v~~~el 416 (748)
+..+++|++++.+++ |+++ |+++|.... ...+..++.+++++++++ .+.. ..|+| .|.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f-~g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIF-LPSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEE-eCCCChHHH
Confidence 999999999998877 6655 888885331 112233455667777665 3221 13665 468999999
Q ss_pred HHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004512 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (748)
Q Consensus 417 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (748)
..+|+.||++++||..||||++++|||+||. |+|+|..+|..+.+. +|++++| |+
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~---------------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~ 351 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAGK---------------------PVIACNSGGPLETVVDGETGFLCEP-TP 351 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcCC---------------------CEEEECCCCcHHHhccCCceEEeCC-CH
Confidence 9999999999999999999999999999975 899999999888773 4888887 99
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHH
Q 004512 494 DAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKS 533 (748)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~ 533 (748)
+++|++|.++++.++ +++.+.++.++++. .+++...+++
T Consensus 352 ~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 352 EEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999999999864 56667777888875 4777776654
No 48
>PLN02949 transferase, transferring glycosyl groups
Probab=99.86 E-value=2.5e-19 Score=203.27 Aligned_cols=314 Identities=15% Similarity=0.142 Sum_probs=209.6
Q ss_pred ccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc-hhhHHHHHHhhccCCeEEE
Q 004512 141 FCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH-LMVLPSFLRKRFHRVKVGF 219 (748)
Q Consensus 141 f~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~ig~ 219 (748)
+-..-.||-||.+.. .-...|.++..+.+ +. |.|||-.-- ..-+| ++| +..+||++
T Consensus 109 ~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 344556777776532 22566776664432 22 348884321 12223 233 34789999
Q ss_pred EecCCCCchhHhhcCcch-------------------HH----H---HHH--hhhcCEEEeeCHHHHHHHHHHHHHHhCc
Q 004512 220 FLHSPFPSSEIYRTLPVR-------------------DE----I---LKS--LLNSDLIGFHTFDYARHFLSSCSRMLGL 271 (748)
Q Consensus 220 flH~PfPs~e~fr~lp~r-------------------~~----i---l~~--ll~~DlIgF~t~~~~~~Fl~~~~r~lg~ 271 (748)
.+|.|.-+.+....+-.+ +. . +.. +-.+|.|...+....+++.+ ..+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC-
Confidence 999887665443322100 00 0 111 24567777766655545432 111
Q ss_pred cccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHH
Q 004512 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (748)
Q Consensus 272 ~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 351 (748)
...++.++++|+|...+... + . +...+++++++|||+.+.||+..+|+||.++
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~-~--------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---P-L--------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---C-c--------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 11256778899998766321 1 0 0113457899999999999999999999998
Q ss_pred HHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCC
Q 004512 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (748)
Q Consensus 352 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 431 (748)
+++.++-..++.|+++|... .++..++.+++++++++.+.. + .|.|+ +.++.+++.++|+.||+++.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f~-g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEFH-KNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEEe-CCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234488888542 122234456777777665432 1 36654 68999999999999999999999
Q ss_pred CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc-ccC------CcEEeCCCCHHHHHHHHHHHh
Q 004512 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-SLS------GAIRVNPWNVDAVADAMDSAL 504 (748)
Q Consensus 432 ~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~ai~VnP~d~~~~A~ai~~aL 504 (748)
.||||++++||||||. |+|+|..+|..+ .+. +|++++ |++++|++|.+++
T Consensus 364 ~E~FGivvlEAMA~G~---------------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll 420 (463)
T PLN02949 364 DEHFGISVVEYMAAGA---------------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVL 420 (463)
T ss_pred cCCCChHHHHHHHcCC---------------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHH
Confidence 9999999999999975 889999888653 332 377774 9999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 004512 505 QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (748)
Q Consensus 505 ~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~ 542 (748)
++++++++++.++.++++.++++..-++++++.++...
T Consensus 421 ~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 421 RMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99887888888889999999999998888888776543
No 49
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=2.1e-19 Score=202.70 Aligned_cols=289 Identities=12% Similarity=0.084 Sum_probs=190.0
Q ss_pred HHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeE-EEEecCCCCchhHhhcCcchHHHH----HHhhhcCEEEeeCHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKV-GFFLHSPFPSSEIYRTLPVRDEIL----KSLLNSDLIGFHTFDY 257 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-g~flH~PfPs~e~fr~lp~r~~il----~~ll~~DlIgF~t~~~ 257 (748)
++...+| |+|+.|++...++..+..... .+++ ....|. ++... +..++ +.+..++++.-.+. +
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 4445566 899999999766655554443 4555 444665 32211 11211 12333444333222 3
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEecccc
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 336 (748)
..+.....+.+.. .++....+|.++|||||++.|.+....+ ......++..+ .+.++|++|+|+.
T Consensus 343 v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~ 408 (578)
T PRK15490 343 MSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFV 408 (578)
T ss_pred hhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEe
Confidence 3222221111110 0111245788999999999887642111 11112222233 3457889999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004512 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (748)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el 416 (748)
+.||...+++|+.++++++|+++ |+++| +|+. ++++++++++.+.. ..|+|++ . .+++
T Consensus 409 ~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~----~eeLk~la~elgL~------d~V~FlG-~--~~Dv 466 (578)
T PRK15490 409 GDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDL----RAEAQKRAEQLGIL------ERILFVG-A--SRDV 466 (578)
T ss_pred hhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----Cchh----HHHHHHHHHHcCCC------CcEEECC-C--hhhH
Confidence 99999999999999999998876 88887 3443 34556666554321 1366554 4 5789
Q ss_pred HHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004512 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (748)
Q Consensus 417 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (748)
..+|+.||+||+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|+
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl---------------------PVVATdvGG~~EiV~dG~nG~LVp~~D~ 525 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVGV---------------------PVISTPAGGSAECFIEGVSGFILDDAQT 525 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhCC---------------------CEEEeCCCCcHHHcccCCcEEEECCCCh
Confidence 9999999999999999999999999999975 899999999998873 5999999999
Q ss_pred HHHHHHHHHHhcCCH--HHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 004512 494 DAVADAMDSALQMEN--QEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (748)
Q Consensus 494 ~~~A~ai~~aL~m~~--~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~ 540 (748)
+++++++..+..+.. .++..+.+++++++. ++++..-++.|++.++.
T Consensus 526 ~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 526 VNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 999998854333222 234445577888885 48999888888877654
No 50
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.86 E-value=1.9e-19 Score=195.18 Aligned_cols=278 Identities=18% Similarity=0.187 Sum_probs=192.3
Q ss_pred CCEEEEeCcchhh---HHHHHH--hhccCCeEEEEecCCCCchhHhhcCcchHHHHH-HhhhcCEEEeeCHHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMV---LPSFLR--KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHFLSS 264 (748)
Q Consensus 191 ~DiVwvhDyhl~l---lp~~lr--~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~-~ll~~DlIgF~t~~~~~~Fl~~ 264 (748)
.|+|++|+++-.. ....+. .+..+.++.+.+|...+....+ ....+.+ -+-.+|.|.+.+.+.++.+...
T Consensus 77 ~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 77 PDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRP----GDRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred CCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccch----hhhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 3899998733111 111111 1236789999999862221111 1112222 2456899998875555555421
Q ss_pred HHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHH
Q 004512 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (748)
Q Consensus 265 ~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (748)
. . ..++.++|+|+|...+.... . .++ .....++.+|+++||+.+.||+..+
T Consensus 153 ~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~~K~~~~l 203 (366)
T cd03822 153 A--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRPYKGLELL 203 (366)
T ss_pred c--------------------C-CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccCCCCHHHH
Confidence 0 0 23678899999987765321 1 111 1122567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004512 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (748)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (748)
++|++.+.+++|+++ |+++|... ........+..+++.+.+.. ..|+++++.++.+++..+|+.||
T Consensus 204 l~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad 269 (366)
T cd03822 204 LEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAAD 269 (366)
T ss_pred HHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcC
Confidence 999999998888766 88777421 11111111111233333221 13776666699999999999999
Q ss_pred EEEecCCCc--cCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-C--CcEEeCCCCHHHHHHH
Q 004512 425 CCVVNCVRD--GMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNVDAVADA 499 (748)
Q Consensus 425 v~vvtS~~E--GmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~VnP~d~~~~A~a 499 (748)
++++||..| |++++++|||+||. |+|+|..+| .+.+ . +|+++++.|++++|++
T Consensus 270 ~~v~ps~~e~~~~~~~~~Ea~a~G~---------------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~ 327 (366)
T cd03822 270 VVVLPYRSADQTQSGVLAYAIGFGK---------------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEA 327 (366)
T ss_pred EEEecccccccccchHHHHHHHcCC---------------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHH
Confidence 999999999 99999999999975 899999888 6666 2 5899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004512 500 MDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 538 (748)
|.++++++. ++..+.++.+++++++++..+++.+.+.+
T Consensus 328 l~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 328 IRRLLADPE-LAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHcChH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999754 56667788899999999999999887654
No 51
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.85 E-value=1.1e-19 Score=205.04 Aligned_cols=316 Identities=16% Similarity=0.168 Sum_probs=188.3
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcch-HHHHHHhhhcCEEEeeC-------HHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHT-------FDYARHFL 262 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r-~~il~~ll~~DlIgF~t-------~~~~~~Fl 262 (748)
.|++|.||++......+||++.++++.+|+.|-. ++-|.+-.. .++-. ++-.|.- .-+.++.+
T Consensus 149 ~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT----~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~i 219 (590)
T cd03793 149 AVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHAT----LLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCI 219 (590)
T ss_pred CeEEEEcchhHhHHHHHHHHhCCCCCEEEEeccc----ccccccccCCcccch-----hhhhcchhhhhhcccchHHHHH
Confidence 5999999999999999999888999999999943 333431110 00000 0000000 00122222
Q ss_pred H-----HHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCc----hhHHHHH-----HHHHHc---CC
Q 004512 263 S-----SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLD----VTGQKVK-----ELKEKF---DG 325 (748)
Q Consensus 263 ~-----~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~----~~~~~~~-----~lr~~~---~~ 325 (748)
+ .+++++.++..+..+. ....++...+ |+|||||++.|.+..... ...+++. .++.+| .+
T Consensus 220 E~~aa~~Ad~fttVS~it~~E~--~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d 296 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYEA--EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLD 296 (590)
T ss_pred HHHHHhhCCEEEECChHHHHHH--HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCC
Confidence 1 1222222221111110 0122333222 899999999987642110 0111122 234444 36
Q ss_pred ceEEEE-eccccc-cCCHHHHHHHHHHHHHhCCCC-CCceEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHh
Q 004512 326 KIVILG-VDDMDL-FKGISLKFLAMGQLLEQHPDL-RGKVVLVQITNPARSSG---------KDVQDLLSDTNRIAEEIN 393 (748)
Q Consensus 326 ~~vil~-VdRld~-~KGi~~~l~A~~~ll~~~P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~ei~~lv~~IN 393 (748)
++++++ +||+++ .||++.+|+|+.++-..-..- .++.|+..+..|+...+ .-.+++++.++++..+|+
T Consensus 297 ~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~ 376 (590)
T cd03793 297 KTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIG 376 (590)
T ss_pred CeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhh
Confidence 788888 899999 999999999999875521111 12233444445654331 223456666666666665
Q ss_pred cc--------------------------------------------------------------cCC-CCCccEEEecCC
Q 004512 394 LN--------------------------------------------------------------FGK-PGYEPIVIIKEP 410 (748)
Q Consensus 394 ~~--------------------------------------------------------------~g~-~~~~pV~~~~~~ 410 (748)
.+ +.. .+-..|+|....
T Consensus 377 ~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~ 456 (590)
T cd03793 377 KRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEF 456 (590)
T ss_pred hhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccc
Confidence 55 110 122235544433
Q ss_pred CC------hhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----c
Q 004512 411 LS------TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----P 480 (748)
Q Consensus 411 v~------~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~ 480 (748)
++ ..+...+|+.||+||+||++||||++++||||||. |+|+|..+|.. +
T Consensus 457 L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~---------------------PvI~t~~~gf~~~v~E 515 (590)
T cd03793 457 LSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI---------------------PSITTNLSGFGCFMEE 515 (590)
T ss_pred cCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCC---------------------CEEEccCcchhhhhHH
Confidence 33 33588999999999999999999999999999975 89999999883 4
Q ss_pred ccC----CcEEeC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 481 SLS----GAIRVN-------PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 481 ~l~----~ai~Vn-------P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
.+. .|+.|. +.+++++|++|.+.++++..++........+.....+|.+-+..|++.-.
T Consensus 516 ~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 516 HIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 432 378887 56688999999999977644333332233355566788877777776543
No 52
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=1.5e-19 Score=212.38 Aligned_cols=277 Identities=14% Similarity=0.098 Sum_probs=182.8
Q ss_pred CEEEEeCcchhhHHHHHHhhccCCeEEE-EecCC--CCchhHhhcCcchHHHHHHhhhcCEEEee--CHHHHHHHHHHHH
Q 004512 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGF-FLHSP--FPSSEIYRTLPVRDEILKSLLNSDLIGFH--TFDYARHFLSSCS 266 (748)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~ig~-flH~P--fPs~e~fr~lp~r~~il~~ll~~DlIgF~--t~~~~~~Fl~~~~ 266 (748)
|+|++|++.-.++..+..+. ..+|+.+ .+|.- +...+.++. ....+.+.+..++.+.+. +....+.+..
T Consensus 402 DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--- 475 (694)
T PRK15179 402 SVVHIWQDGSIFACALAALL-AGVPRIVLSVRTMPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD--- 475 (694)
T ss_pred cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCCCccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH---
Confidence 89999999887776666554 3556544 55642 111221110 011122333334433332 3222333322
Q ss_pred HHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCCHHHHH
Q 004512 267 RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 267 r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l 345 (748)
.++ ....+|.++|+|||+..|.+. +........++... .+.++|++|+|+++.||+..++
T Consensus 476 -~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI 536 (694)
T PRK15179 476 -WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWV 536 (694)
T ss_pred -HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHH
Confidence 112 123478899999999888532 11111112222222 2467899999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (748)
+||.++++++|+++ |+++|. |+. ++++++++++.+.. + .|+ |.|.. +++..+|+.||+
T Consensus 537 ~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~----~--~V~-flG~~--~dv~~ll~aaDv 594 (694)
T PRK15179 537 EAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG----E--RIL-FTGLS--RRVGYWLTQFNA 594 (694)
T ss_pred HHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC----C--cEE-EcCCc--chHHHHHHhcCE
Confidence 99999999999876 888883 332 24556666655432 1 255 44554 579999999999
Q ss_pred EEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH--HHHHHHH
Q 004512 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV--DAVADAM 500 (748)
Q Consensus 426 ~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~--~~~A~ai 500 (748)
+|+||.+|||+++++|||+||. |+|+|..+|+.+.+. +|++|+|.|+ ++++++|
T Consensus 595 ~VlpS~~Egfp~vlLEAMA~G~---------------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL 653 (694)
T PRK15179 595 FLLLSRFEGLPNVLIEAQFSGV---------------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEAL 653 (694)
T ss_pred EEeccccccchHHHHHHHHcCC---------------------eEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHH
Confidence 9999999999999999999975 899999999998883 4999998885 6899999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Q 004512 501 DSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQD 537 (748)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~ 537 (748)
.+++..... .....+++++++. ++++..-++.+++-
T Consensus 654 ~~ll~~l~~-~~~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 654 ARIHDMCAA-DPGIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHhChhc-cHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 998876542 2334456777775 67877777766643
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.85 E-value=1.1e-19 Score=196.82 Aligned_cols=273 Identities=18% Similarity=0.155 Sum_probs=197.3
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCch--hHhhc---CcchHHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYRT---LPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~--e~fr~---lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
.|+||+|++..... +....++.+.+|-.+|.. +.+.. ...+......+..+|.+.+.+...++.+.+..
T Consensus 86 ~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 159 (365)
T cd03809 86 LDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL 159 (365)
T ss_pred CCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh
Confidence 38999998877655 456789999999765421 11110 11223344556778999998877666665421
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHH
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (748)
+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..++
T Consensus 160 ----~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l 214 (365)
T cd03809 160 ----GV---------------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLL 214 (365)
T ss_pred ----Cc---------------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHH
Confidence 11 1235678999999987754311 11 11112235788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (748)
+|+..+.+++|+.+ |+++|... .........+ .+. +. ...+.+.+.++.+++..+|+.||+
T Consensus 215 ~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 215 EAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred HHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhh
Confidence 99999998888655 88777432 1111222222 121 21 123445679999999999999999
Q ss_pred EEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEeCCCCHHHHHHHHHHHh
Q 004512 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSAL 504 (748)
Q Consensus 426 ~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL 504 (748)
+++||..||++++++|||+||. |+|+|+.+|..+.+ .+|+.++|.|+++++++|.+++
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G~---------------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~ 334 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACGT---------------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLL 334 (365)
T ss_pred hcccchhccCCCCHHHHhcCCC---------------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999975 88999998888877 4789999999999999999998
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 004512 505 QMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (748)
Q Consensus 505 ~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl 535 (748)
+.+ +.+..+.+..++++.++++..+++.++
T Consensus 335 ~~~-~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 335 EDP-ALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 754 466667777888899999999998875
No 54
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.85 E-value=2.3e-20 Score=197.30 Aligned_cols=155 Identities=19% Similarity=0.200 Sum_probs=122.1
Q ss_pred ceEEEecCCCCCCCCC--CCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCC
Q 004512 585 SRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~--~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~ 662 (748)
+++||+||||||++.. |....++++++++|++|++++++.|+|+|||+...+.++++.+ ++.++|+||++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~- 91 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING- 91 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC-
Confidence 6899999999999975 3556788999999999998789999999999999999999865 57899999999986544
Q ss_pred cceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCC-CeEEeeCCe
Q 004512 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQH 741 (748)
Q Consensus 663 ~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~-~v~v~~Gk~ 741 (748)
.|... ..+.+|.+.+.+.++.+.+++||++||.|+.+++||||++ |+.. ....++.+ .+.+.. .+.+..|++
T Consensus 92 ~~~~~--~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~-~~~~-~~~~~l~~---~i~~~~~~~~~~~g~~ 164 (266)
T PRK10187 92 KTHIV--HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQA-PQHE-DALLALAQ---RITQIWPQLALQPGKC 164 (266)
T ss_pred Ceeec--cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCC-CccH-HHHHHHHH---HHHhhCCceEEeCCCE
Confidence 34321 3455666677777777788999999999999999999999 4322 12223333 333333 378889999
Q ss_pred EEEEecC
Q 004512 742 IVEVKPQ 748 (748)
Q Consensus 742 vvEvrP~ 748 (748)
++||+|+
T Consensus 165 ~lEi~p~ 171 (266)
T PRK10187 165 VVEIKPR 171 (266)
T ss_pred EEEeeCC
Confidence 9999985
No 55
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.85 E-value=4.3e-19 Score=191.61 Aligned_cols=274 Identities=18% Similarity=0.200 Sum_probs=184.4
Q ss_pred CCEEEEeCcc-hhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHH------HHHhhhcCEEEeeCHHHHHHHHH
Q 004512 191 EDYVWIHDYH-LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI------LKSLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 191 ~DiVwvhDyh-l~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~i------l~~ll~~DlIgF~t~~~~~~Fl~ 263 (748)
.|+|++|+.. ....+.....+..+.++.++.|..++...... -+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 4899999843 22222222222356889999997665432100 0111110 11123456666666433322211
Q ss_pred HHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004512 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (748)
Q Consensus 264 ~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (748)
.+...++.++|+|+|.+.+..... . .. ++++ .++++|+++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~---~----~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS---R----GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh---h----hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 112346788999999988864311 1 11 3333 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
+..+++|+.++.+++|+++ |+++|... ..+ ...++.++.+.+ ..+ .|. +.|.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~----~~~--~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALG----LED--RVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcC----ccc--eEE-EcCCCChHHHHHHH
Confidence 9999999999998888876 88777421 122 223333333322 111 255 56799999999999
Q ss_pred HhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHH
Q 004512 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVAD 498 (748)
Q Consensus 421 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ 498 (748)
+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|++++ .+.+++++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 337 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGT---------------------PVVTTDKVPWQELIEYGCGWVVD-DDVDALAA 337 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCC---------------------CEEEcCCCCHHHHhhcCceEEeC-CChHHHHH
Confidence 999999999999999999999999975 899999999888774 355555 46699999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 004512 499 AMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (748)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl 535 (748)
+|.++++++ +++..+.++.++++ +++++..-++.++
T Consensus 338 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 338 ALRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999987 57777777888884 5678877777664
No 56
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.84 E-value=1.1e-18 Score=195.67 Aligned_cols=271 Identities=13% Similarity=0.102 Sum_probs=191.6
Q ss_pred CCCCEEEEeCcchh-hHHHHHHhhccCCeEEEEecCC--CCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 189 PDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSP--FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 189 ~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~P--fPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
++.|+++.|-++.. ..-.+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~- 201 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR- 201 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH-
Confidence 44577777665544 3334566666666688888843 2211111112222222 356899999887766554321
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHH
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (748)
.+ ....++.++|+|++...+.... ...++..|+++||+.+.||+..++
T Consensus 202 ---~~---------------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li 249 (407)
T cd04946 202 ---YP---------------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLII 249 (407)
T ss_pred ---CC---------------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHH
Confidence 12 1234667899999987664310 113567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh--C
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI--A 423 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~--A 423 (748)
+|+.++.+++|+.. +.++.+|. |++.+ ++++++++.+. . ..|+ +.|.++.+|+.++|+. |
T Consensus 250 ~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~----~l~~~~~~~~~----~--~~V~-f~G~v~~~e~~~~~~~~~~ 311 (407)
T cd04946 250 KALAALAKARPSIK--IKWTHIGG-----GPLED----TLKELAESKPE----N--ISVN-FTGELSNSEVYKLYKENPV 311 (407)
T ss_pred HHHHHHHHhCCCce--EEEEEEeC-----chHHH----HHHHHHHhcCC----C--ceEE-EecCCChHHHHHHHhhcCC
Confidence 99999999988764 66776763 44433 34444442211 1 1255 5679999999999986 7
Q ss_pred cEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCC-CCHHHHHHH
Q 004512 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNP-WNVDAVADA 499 (748)
Q Consensus 424 Dv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP-~d~~~~A~a 499 (748)
|+++.||..|||+++++|||+||. |+|+|..+|..+.+. +|++++| .|++++|++
T Consensus 312 ~v~v~~S~~Eg~p~~llEAma~G~---------------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 312 DVFVNLSESEGLPVSIMEAMSFGI---------------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred CEEEeCCccccccHHHHHHHHcCC---------------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 899999999999999999999975 899999999998884 3788877 489999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Q 004512 500 MDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (748)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl 535 (748)
|.++++++ +++..+.+++++++. ++++..+.+.|+
T Consensus 371 I~~ll~~~-~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 371 LSKFIDNE-EEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999854 577778888999885 578888887775
No 57
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.84 E-value=7.7e-19 Score=190.58 Aligned_cols=264 Identities=17% Similarity=0.182 Sum_probs=191.0
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
.|+|++|..+...+..++..+....+..+.+|.+-.... +....+-+.+..+|.+...+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 389999987665555566555557888888885421111 111233344567999999988777666431 11
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (748)
....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234678899999988775421 0122457789999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
+.+++|+++ |+++|. ++.. .++.+.+.+.+.. +.+.+.|.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~-------~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELGLE-------DRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcCCC-------CeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 877773 2222 2344444443211 2344567899999999999999999999
Q ss_pred CC------ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHH
Q 004512 431 VR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMD 501 (748)
Q Consensus 431 ~~------EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (748)
.. |||+++.+|||+||. |+|+|..+|..+.+. +|++++|.|++++|++|.
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~ 322 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMGL---------------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADAIE 322 (355)
T ss_pred eecCCCCccCccHHHHHHHHcCC---------------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHH
Confidence 99 999999999999975 889999888777773 589999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHH
Q 004512 502 SALQMENQEKILRHEKHYKYISS-HDVAYWAK 532 (748)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~ 532 (748)
++++++. ++..+.+..++++.+ +++...++
T Consensus 323 ~~~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 323 RLLDDPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHhCHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999764 466667777888754 66665544
No 58
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.84 E-value=7.5e-19 Score=189.92 Aligned_cols=267 Identities=18% Similarity=0.265 Sum_probs=187.0
Q ss_pred HHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchH---------HHH-HHhhhcCEEEee
Q 004512 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------EIL-KSLLNSDLIGFH 253 (748)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~---------~il-~~ll~~DlIgF~ 253 (748)
.+..++ |+|++|+...+........+..++++.+.+|.+|+. +....+... .+. ..+..+|.+.+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344455 899999875554333333334578999999988763 222222111 111 223467888887
Q ss_pred CHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEE
Q 004512 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVIL 330 (748)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 330 (748)
+......+.. .+ ...++.++|+|+|...+..... ...++++ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEE
Confidence 7765444321 01 1224788999999987764311 1112333 4678899
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004512 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (748)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~ 410 (748)
++||+.+.||+..+++|+..+.++.|+++ |+++|. ++.. .++++++++.+.. ..|. +.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVI-FTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-Eecc
Confidence 99999999999999999999988767655 887773 2322 3444554443321 1255 4578
Q ss_pred CChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEE
Q 004512 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIR 487 (748)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 487 (748)
++.+++..+|+.||++++||..||+|++.+|||+||. |+|+|..+|..+.+. +|++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~---------------------PvI~~~~~~~~~~i~~~~~g~~ 325 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL---------------------PVVAVDAPGLPDLVADGENGFL 325 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC---------------------cEEEeCCCChhhheecCceeEE
Confidence 9999999999999999999999999999999999975 899999988888773 5899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCC
Q 004512 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526 (748)
Q Consensus 488 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 526 (748)
+++.|. +++++|.++++++. .++.+.++.++++.+++
T Consensus 326 ~~~~~~-~~~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 326 FPPGDE-ALAEALLRLLQDPE-LRRRLSKNAEESAEKFS 362 (374)
T ss_pred eCCCCH-HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHH
Confidence 999888 99999999999876 44666777888887765
No 59
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.84 E-value=1.1e-18 Score=199.78 Aligned_cols=271 Identities=14% Similarity=0.086 Sum_probs=183.0
Q ss_pred CCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCc-hhHhhcC----cchHHHHHHhhhcCEEEeeCHHHHHHHHHH
Q 004512 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS-SEIYRTL----PVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (748)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs-~e~fr~l----p~r~~il~~ll~~DlIgF~t~~~~~~Fl~~ 264 (748)
+.|++.++--+... +..+ +..+.++++.++|.-.-+ ...-... +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45888886544433 3334 556789999999954210 0000000 111222344445688777776544433321
Q ss_pred HHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHH
Q 004512 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (748)
Q Consensus 265 ~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~ 344 (748)
... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHH
Confidence 111 12223467889999875543210 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCc
Q 004512 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (748)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 424 (748)
++|+.++.+++|+++ |+++|. |++. +++++++++.+.. + .|.+ .|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~f-~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ----D--YIHL-KGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC----C--eEEE-cCCC---CHHHHHHhCC
Confidence 999999999999876 887873 4432 4566666554321 1 2554 4543 6889999999
Q ss_pred EEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCC----CC----
Q 004512 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNP----WN---- 492 (748)
Q Consensus 425 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP----~d---- 492 (748)
++|+||.+||||++++||||||. |+|+|... |..+.+. +|++|++ .|
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~---------------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~ 453 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL---------------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQI 453 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC---------------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHH
Confidence 99999999999999999999975 89999986 6777773 5899974 34
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
++++|++|.++++ +++++.+.+..++.++++++..-++.+.+-++
T Consensus 454 ~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 454 ITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8999999999994 34677777888888888888877777765554
No 60
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.84 E-value=1e-18 Score=187.97 Aligned_cols=280 Identities=15% Similarity=0.174 Sum_probs=193.5
Q ss_pred HHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHh-hhcCEEEeeCHHHHHHHHH
Q 004512 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~l-l~~DlIgF~t~~~~~~Fl~ 263 (748)
+..++ |+|++|+++...............++.+..|.-++...-+ ..+....+.+-+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 33454 8999999997777666666546788999999765542100 001111121111 2356665555544433322
Q ss_pred HHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCC
Q 004512 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (748)
Q Consensus 264 ~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 340 (748)
. +. ...++.++|+|+|...+...... ...+++++ .++.+|+++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 12356789999999877643211 12233444 46788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHH-HHhcccCCCCCccEEEecCCCChhhHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE-EINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~-~IN~~~g~~~~~pV~~~~~~v~~~el~al 419 (748)
+..+++|+..+.+++|+++ |+++|.. +....+ ..... +. +..+ .|.++ + +.+++..+
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~-----~~~~~~----~~~~~~~~----~~~~--~v~~~-g--~~~~~~~~ 265 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDG-----PDRANL----ELLALKEL----GLED--KVILL-G--ERSDVPAL 265 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCC-----cchhHH----HHHHHHhc----CCCc--eEEEc-c--ccccHHHH
Confidence 9999999999998888765 8877743 222222 22222 22 2111 25544 3 35789999
Q ss_pred HHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHH
Q 004512 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVAD 498 (748)
Q Consensus 420 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ 498 (748)
|+.||++++||..||+|++++|||+||. |+|+|..+|..+.+. +|+++++.|++++++
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~---------------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~ 324 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL---------------------PVVATDVGDNAELVGDTGFLVPPGDPEALAE 324 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC---------------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHH
Confidence 9999999999999999999999999975 899999999888885 599999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHH
Q 004512 499 AMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQD 537 (748)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~ 537 (748)
+|.++++++ +++..+.+++++++.+ +++..-++.|.+-
T Consensus 325 ~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 325 AIEALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999987 4666677788888865 7888888877764
No 61
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.84 E-value=4.6e-19 Score=198.54 Aligned_cols=187 Identities=12% Similarity=-0.013 Sum_probs=129.0
Q ss_pred EEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecc-c-cccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDD-M-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
.++.++|+|||++.+..... . ...+ .-.++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 36888999999754322100 0 0001 1246788999999 4 4789999999999875 233 45888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
+|.. +... . ..|.+++...+.+++..+|+.||+||+||..|||+++++||||||
T Consensus 277 vG~g-----~~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 8742 1100 0 024444323367899999999999999999999999999999997
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-H
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-S 523 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~ 523 (748)
. |+|+|..+|+.+.+. +|++|+|.|++++|+++...+... +.....+..++++ .
T Consensus 331 ~---------------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~ 387 (405)
T PRK10125 331 V---------------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRA 387 (405)
T ss_pred C---------------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHH
Confidence 5 899999999988773 599999999999998653322110 0000123355554 4
Q ss_pred hCCHHHHHHHHHHHHH
Q 004512 524 SHDVAYWAKSIDQDLE 539 (748)
Q Consensus 524 ~~~~~~W~~~fl~~l~ 539 (748)
.++...-++.+++-.+
T Consensus 388 ~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 388 AYSGQQMLEEYVNFYQ 403 (405)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 5888888888876543
No 62
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.83 E-value=2.4e-18 Score=184.13 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=202.2
Q ss_pred HHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhh----cCcchHHHHHHhhhcCEEEeeCHHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR----TLPVRDEILKSLLNSDLIGFHTFDYA 258 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr----~lp~r~~il~~ll~~DlIgF~t~~~~ 258 (748)
+.+..++ |+|++|+++...+.. +..+..+.++.+++|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3344344 899999998887665 4445578999999999887532110 00111122233556788888887666
Q ss_pred HHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccc
Q 004512 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDM 335 (748)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRl 335 (748)
+.+.+.. .....++.++|+|+|...+.... ...+... .+++.|+++||+
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 6654310 11124678899999998775421 1111222 467899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhh
Q 004512 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (748)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~e 415 (748)
++.||+..+++|+..+.+++|+++ |+++|. +.... .+.+++.+.+.. ..|. +.+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~----~~~~~~~~~~~~------~~v~-~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLRE----ELEALAAELGLG------DRVT-FLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHH----HHHHHHHHhCCC------cceE-EEeccChhh
Confidence 999999999999999988887655 887772 33333 333443332221 1355 457899999
Q ss_pred HHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004512 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (748)
Q Consensus 416 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (748)
+..+|+.||++++|+..||++++++|||+||. |+|+|..+|..+.+. .|+++++.|
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~ 327 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAGL---------------------PVVASDVGGIPEVVEDGETGLLVPPGD 327 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcCC---------------------cEEEeCCCChhHHhcCCcceEEeCCCC
Confidence 99999999999999999999999999999975 899999988888884 589999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHH
Q 004512 493 VDAVADAMDSALQMENQEKILRHEKHY-KYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~-~~V~~~~~~~W~~~fl~~l 538 (748)
+++++++|.++++.+. .++.+.++.+ ...+.+++..+++.+++.+
T Consensus 328 ~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 328 PEALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999999998764 4555566666 4456789999998887644
No 63
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=1.3e-18 Score=188.13 Aligned_cols=273 Identities=16% Similarity=0.153 Sum_probs=192.6
Q ss_pred HHhCCCCCEEEEeCcchh-hHHHHHHhhccCCeEEEEecCCCCchhHhhcCcch----HHHHHH-hhhcCEEEeeCHHHH
Q 004512 185 EVINPDEDYVWIHDYHLM-VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKS-LLNSDLIGFHTFDYA 258 (748)
Q Consensus 185 ~~~~~~~DiVwvhDyhl~-llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r----~~il~~-ll~~DlIgF~t~~~~ 258 (748)
+..+| |+|++|+.... .....+.+ ..++++.+++|..||..-........ ..+.+. ...+|.+.+.+....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAAR-RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHH-HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 44465 89999875443 22233333 35688999999887732211111111 122222 345788888777665
Q ss_pred HHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEecccc
Q 004512 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD 336 (748)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld 336 (748)
..+.. .. ..++.++|+|+|...|.+.... ...++++ .++++|+++||+.
T Consensus 157 ~~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~ 207 (364)
T cd03814 157 DELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLA 207 (364)
T ss_pred HHHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccc
Confidence 42221 00 1256789999999887653221 1112222 4678899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004512 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (748)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el 416 (748)
+.||+..+++|+.++.++ |+++ |+++|. +++...++ . . ...|.++ +.++.+++
T Consensus 208 ~~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~---~-----~~~v~~~-g~~~~~~~ 260 (364)
T cd03814 208 PEKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A---R-----YPNVHFL-GFLDGEEL 260 (364)
T ss_pred cccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c---c-----CCcEEEE-eccCHHHH
Confidence 999999999999999876 7665 887773 23222221 1 0 1136654 57899999
Q ss_pred HHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCH
Q 004512 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (748)
Q Consensus 417 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~ 493 (748)
..+|+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|++++|.|.
T Consensus 261 ~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~---------------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 261 AAAYASADVFVFPSRTETFGLVVLEAMASGL---------------------PVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred HHHHHhCCEEEECcccccCCcHHHHHHHcCC---------------------CEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 9999999999999999999999999999975 899999999888884 4899999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004512 494 DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 538 (748)
++++++|.++++.++ ++..+.+..++++.++++..+++.+++.+
T Consensus 320 ~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 320 EAFAAALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 999999999998764 66667777888888899999998887653
No 64
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.83 E-value=2.1e-18 Score=186.86 Aligned_cols=275 Identities=16% Similarity=0.234 Sum_probs=195.7
Q ss_pred CCEEEEeC-cchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcC-cc-------hHHHH-HHhhhcCEEEeeCHHHHHH
Q 004512 191 EDYVWIHD-YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PV-------RDEIL-KSLLNSDLIGFHTFDYARH 260 (748)
Q Consensus 191 ~DiVwvhD-yhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~l-p~-------r~~il-~~ll~~DlIgF~t~~~~~~ 260 (748)
-|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+. ..+..+|.+.+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 48999998 444455555555556889999999988754321111 10 11111 2345689999999888776
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (748)
|.. .+ ....++.++|+|+|...+...... ..... .....++.+|+++||+.+.||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccC
Confidence 651 11 112367889999998877543211 00111 111257889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
+..+++|+.++.+. |+++ |+++|. ++....++ +++... + ...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~----~~~~~~----~---~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELK----ELAKAL----G---LDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHH----HHHHHc----C---CCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6654 877763 33333332 222211 1 22477664 89999999999
Q ss_pred HhCcEEEecCCCccC-----CchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCC
Q 004512 421 AIAECCVVNCVRDGM-----NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWN 492 (748)
Q Consensus 421 ~~ADv~vvtS~~EGm-----nLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d 492 (748)
+.||++++||..|++ ++..+|||+||. |+|+|..+|..+.+. +|+++++.|
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~---------------------pvi~~~~~~~~~~~~~~~~g~~~~~~~ 351 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK---------------------PVLASVDGESAELVEEAGAGLVVPPGD 351 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCCC---------------------cEEEecCCCchhhhccCCcceEeCCCC
Confidence 999999999999876 566899999975 899999999988883 489999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHH
Q 004512 493 VDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSI 534 (748)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~f 534 (748)
+++++++|.++++++ ++++.+.++.++++. .+++..+++.+
T Consensus 352 ~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 352 PEALAAAILELLDDP-EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999655 467777788888887 78988888775
No 65
>PHA01633 putative glycosyl transferase group 1
Probab=99.83 E-value=2.7e-19 Score=193.66 Aligned_cols=194 Identities=15% Similarity=0.196 Sum_probs=144.4
Q ss_pred eeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCC
Q 004512 294 LPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS 373 (748)
Q Consensus 294 ~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 373 (748)
+|+|||++.|.+... ...+.++++...+.+..++++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998875321 01111222222235678899999999999999999999999999999876677776651
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCCccEEEec--CCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCc
Q 004512 374 SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (748)
Q Consensus 374 ~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~ 451 (748)
. ++++ . +..+ .|.+++ +.++.+++.++|+.||+||+||..||||++++||||||.
T Consensus 192 --~-------~~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~---- 248 (335)
T PHA01633 192 --K-------QFTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT---- 248 (335)
T ss_pred --H-------HHHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC----
Confidence 1 1111 1 1111 366654 677899999999999999999999999999999999975
Q ss_pred cccccCCCCCCCCCCCceEEEeCCCCcccccC---------------------CcEEeCCCCHHHHHHHHHHHhcCCHHH
Q 004512 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---------------------GAIRVNPWNVDAVADAMDSALQMENQE 510 (748)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------------------~ai~VnP~d~~~~A~ai~~aL~m~~~e 510 (748)
|+|+|..+|..+..+ .|+.++++|++++|++|.+++.+.+
T Consensus 249 -----------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-- 309 (335)
T PHA01633 249 -----------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-- 309 (335)
T ss_pred -----------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--
Confidence 788888777666432 1457889999999999999988864
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Q 004512 511 KILRHEKHYKYISSHDVAYWAKSID 535 (748)
Q Consensus 511 r~~r~~~~~~~V~~~~~~~W~~~fl 535 (748)
+.+|..+.++..+++++..-.++|+
T Consensus 310 ~~~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 310 REERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhhhHHHHHHHHhcCHHHHHHHhh
Confidence 3334556778889999888877765
No 66
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.82 E-value=3e-18 Score=184.15 Aligned_cols=279 Identities=19% Similarity=0.202 Sum_probs=194.0
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
.|+|++|......+......+..++++.+..|.+++....... ..+......+..+|.+.+.+....+.|.+..
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 4899999655444333333334457899999987654321111 1222233445678999999887776665310
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (748)
....++.++|+|+|...+.+... .....+ ....++++++++||+++.||+..+++|++.
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~ 226 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALAR 226 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHH
Confidence 11236788999999988765311 111111 112467899999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
+.+++|+++ |+++|. +++.. .+.++++..+. .+.+.+.+.++.+++..+|+.||++++||
T Consensus 227 ~~~~~~~~~----l~i~g~-----~~~~~----~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 227 LLKKRPDVH----LVIVGD-----GPLRE----ALEALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred HHhcCCCeE----EEEEcC-----CcchH----HHHHHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecch
Confidence 988777655 777663 23322 23333333221 12333557899999999999999999999
Q ss_pred CCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC
Q 004512 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 431 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~ 507 (748)
..||+|++++|||+||. |+|+|+.+|..+.+. +|+++++.|+++++++|.++++++
T Consensus 287 ~~~~~~~~~~Ea~~~G~---------------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 287 LREGFGLVLLEAMACGL---------------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred hhccCChHHHHHHhcCC---------------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCc
Confidence 99999999999999975 899999988887773 368999999999999999999987
Q ss_pred HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 004512 508 NQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (748)
Q Consensus 508 ~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 540 (748)
.. .+..+.++.+ ..+++..+++.+.+.+++
T Consensus 346 ~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 346 WL---RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HH---HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 64 3444444444 567888888888776653
No 67
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.82 E-value=1.5e-18 Score=191.19 Aligned_cols=265 Identities=17% Similarity=0.101 Sum_probs=183.1
Q ss_pred CCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCC-CchhHhhcCcc---hHHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF-PSSEIYRTLPV---RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 190 ~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf-Ps~e~fr~lp~---r~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
..|++.+|-.+.... .+.......+...++|... .....-...++ .+.++..+-.+|.|.+.+..-.+.+...
T Consensus 99 ~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~- 175 (372)
T cd04949 99 KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQ- 175 (372)
T ss_pred CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHH-
Confidence 358998887776554 2233334556677788532 11100000111 2344555667899998887666665431
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHH
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (748)
.+ ...++.++|+|++...+.+.. ....++..++++||+.+.||+..++
T Consensus 176 ---~~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li 223 (372)
T cd04949 176 ---FG----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLI 223 (372)
T ss_pred ---hC----------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHH
Confidence 11 011267899999988765320 0113467899999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (748)
+|+.++.+++|+++ |+++|.. ++... +..++.+.+. .+ .|. +.| ..+++..+|+.||+
T Consensus 224 ~a~~~l~~~~~~~~----l~i~G~g-----~~~~~----~~~~~~~~~~----~~--~v~-~~g--~~~~~~~~~~~ad~ 281 (372)
T cd04949 224 KAFAKVVKQVPDAT----LDIYGYG-----DEEEK----LKELIEELGL----ED--YVF-LKG--YTRDLDEVYQKAQL 281 (372)
T ss_pred HHHHHHHHhCCCcE----EEEEEeC-----chHHH----HHHHHHHcCC----cc--eEE-EcC--CCCCHHHHHhhhhE
Confidence 99999999999877 8877742 33222 3333333222 11 244 444 35789999999999
Q ss_pred EEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCC-CcccccC---CcEEeCCCCHHHHHHHHH
Q 004512 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIRVNPWNVDAVADAMD 501 (748)
Q Consensus 426 ~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~VnP~d~~~~A~ai~ 501 (748)
+|+||..||||++.+|||+||. |+|+|... |..+.+. +|++++|.|++++|++|.
T Consensus 282 ~v~~S~~Eg~~~~~lEAma~G~---------------------PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~ 340 (372)
T cd04949 282 SLLTSQSEGFGLSLMEALSHGL---------------------PVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAII 340 (372)
T ss_pred EEecccccccChHHHHHHhCCC---------------------CEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHH
Confidence 9999999999999999999975 89999877 6777763 589999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 004512 502 SALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (748)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 533 (748)
.+++++ +.++.+.++.++...++++..++++
T Consensus 341 ~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 341 ELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 999976 4566667777877777777666553
No 68
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=8.4e-19 Score=199.72 Aligned_cols=318 Identities=11% Similarity=0.120 Sum_probs=188.8
Q ss_pred EecChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeC-cchhhH-
Q 004512 127 TFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHD-YHLMVL- 204 (748)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhD-yhl~ll- 204 (748)
+|=++++.+.|-.....+-.-+-.--...++| ++|..+. .+-.-+-... +.+...+| |+|+++. .||-..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYp---g~~~~~~-~SI~p~gdI~--~~L~~f~P--DVVHLatP~~LGw~~ 450 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKISFYP---GKFSKER-RSIIPAGDTS--QFIPSKDA--DIAILEEPEHLNWYH 450 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEEeec---chhccCC-ccccchHHHH--HHhhccCC--CEEEECCchhhccHH
Confidence 77788888887776553321111000011222 3343221 1222222222 22233455 8999998 455555
Q ss_pred -HHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHH--HHHHhCccccccCceeE
Q 004512 205 -PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS--CSRMLGLNYESKRGYIG 281 (748)
Q Consensus 205 -p~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~--~~r~lg~~~~~~~g~~~ 281 (748)
.....+++. +++..+||.|+. +++.-.. ..++.++ ..++++|+.. |++++.++.....
T Consensus 451 ~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD~VIaPS~atq~---- 511 (794)
T PLN02501 451 HGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCHKVLRLSAATQD---- 511 (794)
T ss_pred HHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCCEEEcCCHHHHH----
Confidence 344555543 688899999985 4332211 1112211 1133344443 6777765532221
Q ss_pred EEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcC---CceEEEEeccccccCCHHHHHHHHHHHHHhCCCC
Q 004512 282 LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL 358 (748)
Q Consensus 282 i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~ 358 (748)
+. + ..|.. .+|||++.|.+.... ... .++. ..+.+++||||.+.||+..+|+|+..+.++.|++
T Consensus 512 --L~-~-~vI~n-VnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv 578 (794)
T PLN02501 512 --LP-K-SVICN-VHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGF 578 (794)
T ss_pred --hc-c-cceee-cccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCe
Confidence 11 1 11221 159999998764221 111 2221 2245899999999999999999999998888876
Q ss_pred CCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCch
Q 004512 359 RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLV 438 (748)
Q Consensus 359 ~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv 438 (748)
+ |+++| +|++.++ +++++.+++. .|.|+++ .++..++|+.+||||+||.+||||+|
T Consensus 579 r----LvIVG-----DGP~ree----Le~la~eLgL--------~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFGlV 634 (794)
T PLN02501 579 N----LDVFG-----NGEDAHE----VQRAAKRLDL--------NLNFLKG---RDHADDSLHGYKVFINPSISDVLCTA 634 (794)
T ss_pred E----EEEEc-----CCccHHH----HHHHHHHcCC--------EEEecCC---CCCHHHHHHhCCEEEECCCcccchHH
Confidence 5 88887 4565444 4444444322 2565543 34456899999999999999999999
Q ss_pred hhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 004512 439 PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (748)
Q Consensus 439 ~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (748)
++||||||. |+|+|...|...... ++++ +.|.++++++|.++|++++ ++ ...+
T Consensus 635 lLEAMA~Gl---------------------PVVATd~pG~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~r-l~~~ 689 (794)
T PLN02501 635 TAEALAMGK---------------------FVVCADHPSNEFFRSFPNCLT--YKTSEDFVAKVKEALANEP-QP-LTPE 689 (794)
T ss_pred HHHHHHcCC---------------------CEEEecCCCCceEeecCCeEe--cCCHHHHHHHHHHHHhCch-hh-hHHH
Confidence 999999975 899999887543222 3443 3799999999999999875 22 2222
Q ss_pred HHHHHHHhCCHHHHHHHHHHH
Q 004512 517 KHYKYISSHDVAYWAKSIDQD 537 (748)
Q Consensus 517 ~~~~~V~~~~~~~W~~~fl~~ 537 (748)
. ..+++|..-++++++.
T Consensus 690 a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 Q----RYNLSWEAATQRFMEY 706 (794)
T ss_pred H----HhhCCHHHHHHHHHHh
Confidence 1 2356666666666643
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.82 E-value=3.4e-18 Score=182.26 Aligned_cols=260 Identities=16% Similarity=0.116 Sum_probs=179.4
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
.|+|++|+.+...+...+.... .++.+..|..++...... .+....-..+..+|.+.+.+......+.
T Consensus 84 ~d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------- 151 (348)
T cd03820 84 PDVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-------- 151 (348)
T ss_pred CCEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--------
Confidence 3899999987322222222221 478888887765322110 0110122334567888877765541110
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (748)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|+++
T Consensus 152 --------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 152 --------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred --------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 0112367889999998765431 12457889999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
+.+.+|+++ |+++|. +++.. .+.+++.+.+.. . .|. +.+. .+++..+|+.||++++||
T Consensus 203 l~~~~~~~~----l~i~G~-----~~~~~----~~~~~~~~~~~~----~--~v~-~~g~--~~~~~~~~~~ad~~i~ps 260 (348)
T cd03820 203 IAKKHPDWK----LRIVGD-----GPERE----ALEALIKELGLE----D--RVI-LLGF--TKNIEEYYAKASIFVLTS 260 (348)
T ss_pred HHhcCCCeE----EEEEeC-----CCCHH----HHHHHHHHcCCC----C--eEE-EcCC--cchHHHHHHhCCEEEeCc
Confidence 988888765 777773 23322 233344443321 1 244 4444 789999999999999999
Q ss_pred CCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-cC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004512 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-LS---GAIRVNPWNVDAVADAMDSALQM 506 (748)
Q Consensus 431 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (748)
..||||++++|||+||. |+|+|...|..+. +. .|+++++.|++++|++|.+++++
T Consensus 261 ~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~ 319 (348)
T cd03820 261 RFEGFPMVLLEAMAFGL---------------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED 319 (348)
T ss_pred cccccCHHHHHHHHcCC---------------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC
Confidence 99999999999999975 8899987654444 32 58999999999999999999986
Q ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 004512 507 ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (748)
Q Consensus 507 ~~~er~~r~~~~~~~V~~~~~~~W~~~fl 535 (748)
++ .++.+.++.++.++++++...+++|.
T Consensus 320 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 320 EE-LRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HH-HHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 54 55555666788888899988888764
No 70
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.81 E-value=2e-18 Score=193.83 Aligned_cols=268 Identities=12% Similarity=0.071 Sum_probs=168.5
Q ss_pred HHHHhCCCCCEEEEeCcchh-hH--HHHHHhhccCCeEEEEecCCCCchhHhhcCc--chHHHHHHhhhcCEEEeeCHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLM-VL--PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDY 257 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~-ll--p~~lr~~~~~~~ig~flH~PfPs~e~fr~lp--~r~~il~~ll~~DlIgF~t~~~ 257 (748)
+++..+| |+|++|+.-.+ .+ ...+++++ .. ++.++|+.|+ ++++... .....+...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHH
Confidence 3344556 89999995444 43 45555554 44 7779999885 3332211 1112121111 122
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-C-C--ceEEEEec
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-D-G--KIVILGVD 333 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~Vd 333 (748)
++.| .|+.++..+... .+ +.. .+...+.|||++.|.+.... +++.+ + + .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~~-----l~~---~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-QD-----YPR---SIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-HH-----Hhh---CEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEe
Confidence 2222 244444443211 11 011 12223579999988754211 11222 2 2 35799999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCCh
Q 004512 334 DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413 (748)
Q Consensus 334 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~ 413 (748)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.+++ ++++.+++. .++++.|..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L----~~~a~~l~l--------~~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEV----KAAAEKLEL--------DVRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHH----HHHHHhcCC--------cEEEECCCCCH
Confidence 99999999999999999988888865 88777 56665554 445544331 13446665433
Q ss_pred hhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCC
Q 004512 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNP 490 (748)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP 490 (748)
.++|+.+||||+||..||||+|.+||||||. |+|++...| .+.+. +|+.+
T Consensus 295 ---~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~---------------------PVVa~~~~~-~~~v~~~~ng~~~-- 347 (462)
T PLN02846 295 ---DPLFHDYKVFLNPSTTDVVCTTTAEALAMGK---------------------IVVCANHPS-NEFFKQFPNCRTY-- 347 (462)
T ss_pred ---HHHHHhCCEEEECCCcccchHHHHHHHHcCC---------------------cEEEecCCC-cceeecCCceEec--
Confidence 3699999999999999999999999999975 889988876 46562 46666
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
.|.++++++|.++|+.++++... .. ...++|..=+++|++.++
T Consensus 348 ~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 348 DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 48999999999999865433211 11 236777777777776554
No 71
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.81 E-value=1.2e-17 Score=179.95 Aligned_cols=262 Identities=15% Similarity=0.149 Sum_probs=179.0
Q ss_pred HHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHH
Q 004512 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (748)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~F 261 (748)
++++..++ |+|++|.+..+..+.+...+..++++.+++|-.++.. +....+. ...|.+...+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHH
Confidence 34444455 8999998755544333222334689999999765422 1111111 11288888877665555
Q ss_pred HHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCH
Q 004512 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (748)
Q Consensus 262 l~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 341 (748)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 420 1 01247788999999987754210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004512 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (748)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (748)
..+++|+.++.+ ++++ |+++|.. .......... +. . ..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~-----~~~~~~~~~~-------~~--~----~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNG-----LELEEESYEL-------EG--D----PRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCc-----hhhhHHHHhh-------cC--C----CeEE-EeCCCCHHHHHHHHH
Confidence 999999999876 5544 8877743 2211111111 10 1 1355 457899999999999
Q ss_pred hCcEEEecCC-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004512 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (748)
Q Consensus 422 ~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (748)
.||++++||. .||++++++|||+||. |+|+|+.+|..+.+. +|++++|.|+++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~---------------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 320 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGV---------------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLA 320 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCC---------------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHH
Confidence 9999999997 7999999999999975 899999999888873 49999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 004512 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (748)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 536 (748)
++|.++++.+ +.++.+.++.+++++. ...++.+++
T Consensus 321 ~~i~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 321 AALERLIDDP-DLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHHhCh-HHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 9999999955 3555556666666644 444444443
No 72
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.81 E-value=8.5e-18 Score=180.02 Aligned_cols=276 Identities=18% Similarity=0.156 Sum_probs=191.9
Q ss_pred HHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCc--chHHHH-HHhhhcCEEEeeCHHHHHH
Q 004512 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEIL-KSLLNSDLIGFHTFDYARH 260 (748)
Q Consensus 184 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp--~r~~il-~~ll~~DlIgF~t~~~~~~ 260 (748)
++..++ |+|++|..+..++..++.+.....++.++.|...+.... .... ....+- ..+-.+|.+.+.+....+.
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 334455 899999887777777776655667788888765322110 0000 001111 1234578999998888777
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCC
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KG 340 (748)
+.+. +.. .....+.+.|+|+|.+.+...... ...++.+|+++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccC
Confidence 6541 100 012356678999999877543110 1246789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
+..+++|++.+.+++|+++ |+++|.... .+ ..... ++.+.+.. ..|.+++ . .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~~------~~v~~~g-~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGLE------GRVEFLG-F--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCCc------ceEEEee-c--cccHHHHH
Confidence 9999999999988788765 887774321 11 11111 22222111 1366554 3 67899999
Q ss_pred HhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH
Q 004512 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (748)
Q Consensus 421 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A 497 (748)
+.||++++||..||||++++|||+||. |+|+|..+|..+.+. .|+++++.|+++++
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~G~---------------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAMGR---------------------PVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHcCC---------------------CEEEecCCCchhhhhcCcceEEECCCCHHHHH
Confidence 999999999999999999999999975 899999999988884 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHH
Q 004512 498 DAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (748)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~W~~~fl 535 (748)
++|.++++.++ .+..+.++.+++ ...+++..+++.++
T Consensus 321 ~~i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 321 DAIERLIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999887654 556666777888 56688888888765
No 73
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.80 E-value=4e-18 Score=187.80 Aligned_cols=239 Identities=14% Similarity=0.099 Sum_probs=165.8
Q ss_pred HHHHhCCCCCEEEEeCcchhhHHHHHHhhc-cCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~F 261 (748)
+++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+...+..-.+++
T Consensus 79 ~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~ 148 (359)
T PRK09922 79 WLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQM 148 (359)
T ss_pred HHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHH
Confidence 4444555 899999987766666666542 23456666776554321111 122356888887776555554
Q ss_pred HHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEecccc--ccC
Q 004512 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD--LFK 339 (748)
Q Consensus 262 l~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~K 339 (748)
.. .++. ..++.++|+|||.+.+.... + +..++++++++||+. ..|
T Consensus 149 ~~-----~~~~---------------~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k 195 (359)
T PRK09922 149 MA-----RGIS---------------AQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQK 195 (359)
T ss_pred HH-----cCCC---------------HHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCc
Confidence 32 1211 12567789999976553210 0 013467899999996 469
Q ss_pred CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC--ChhhHH
Q 004512 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL--STQDKV 417 (748)
Q Consensus 340 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v--~~~el~ 417 (748)
|+..+++|+.++ .+ ++.|+++|. |++. +++++++++.|.. + .|+|. |.+ +.+++.
T Consensus 196 ~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~----~~l~~~~~~~~l~----~--~v~f~-G~~~~~~~~~~ 252 (359)
T PRK09922 196 NVKELFDGLSQT---TG----EWQLHIIGD-----GSDF----EKCKAYSRELGIE----Q--RIIWH-GWQSQPWEVVQ 252 (359)
T ss_pred CHHHHHHHHHhh---CC----CeEEEEEeC-----CccH----HHHHHHHHHcCCC----C--eEEEe-cccCCcHHHHH
Confidence 999999999876 22 355888873 4443 3455555554321 1 36654 544 458999
Q ss_pred HHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeC-CCCcccccC---CcEEeCCCCH
Q 004512 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS---GAIRVNPWNV 493 (748)
Q Consensus 418 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~VnP~d~ 493 (748)
.+|+.||++|+||..||||++++||||||. |+|+|+ .+|+.+.+. +|++|+|.|+
T Consensus 253 ~~~~~~d~~v~~s~~Egf~~~~lEAma~G~---------------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~ 311 (359)
T PRK09922 253 QKIKNVSALLLTSKFEGFPMTLLEAMSYGI---------------------PCISSDCMSGPRDIIKPGLNGELYTPGNI 311 (359)
T ss_pred HHHhcCcEEEECCcccCcChHHHHHHHcCC---------------------CEEEeCCCCChHHHccCCCceEEECCCCH
Confidence 999999999999999999999999999975 899999 888888774 4899999999
Q ss_pred HHHHHHHHHHhcCCH
Q 004512 494 DAVADAMDSALQMEN 508 (748)
Q Consensus 494 ~~~A~ai~~aL~m~~ 508 (748)
+++|++|.++++.++
T Consensus 312 ~~la~~i~~l~~~~~ 326 (359)
T PRK09922 312 DEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHHhCcc
Confidence 999999999999875
No 74
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.80 E-value=1.1e-17 Score=188.04 Aligned_cols=273 Identities=12% Similarity=0.074 Sum_probs=176.5
Q ss_pred CCEEEEeCcchh--hHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchH---HH---HHH-h-hhcCEEEeeCHHHHHH
Q 004512 191 EDYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---EI---LKS-L-LNSDLIGFHTFDYARH 260 (748)
Q Consensus 191 ~DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~---~i---l~~-l-l~~DlIgF~t~~~~~~ 260 (748)
.|+|++|..... .+...+-.+..++|+++.+|.-+++..-. ..+... .+ ++. + ..||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 499999984432 22233333345789999999754321100 011000 11 111 1 2367776666554433
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHH---------------Hc--
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKE---------------KF-- 323 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~---------------~~-- 323 (748)
+.+ .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceecC
Confidence 321 11 123467889999 4566655321 1 11111111 01
Q ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHHh------CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004512 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ------HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g 397 (748)
++..+++++||+.+.||+..+++|+..+.+. +|++ .|+++| +|+.. +++++++++.+.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i----~l~ivG-----~G~~~----~~l~~~~~~~~l--- 293 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKL----LCIITG-----KGPLK----EKYLERIKELKL--- 293 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCE----EEEEEe-----cCccH----HHHHHHHHHcCC---
Confidence 2356888999999999999999999998763 3554 488887 34433 345555554322
Q ss_pred CCCCccEEEecCCCChhhHHHHHHhCcEEEec---CCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeC
Q 004512 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN---CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474 (748)
Q Consensus 398 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se 474 (748)
..++++.+.++.+++..+|+.||++|++ +..+||+++++||||||. |+|+|.
T Consensus 294 ----~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~---------------------PVI~s~ 348 (415)
T cd03816 294 ----KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCALD 348 (415)
T ss_pred ----CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC---------------------CEEEeC
Confidence 2478888889999999999999999864 335889999999999975 899999
Q ss_pred CCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 004512 475 FIGCSPSLS---GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (748)
Q Consensus 475 ~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 536 (748)
.+|+.+.+. +|++|+ |++++|++|.++++++ +++++.+.++.+++.+. +|...+.+
T Consensus 349 ~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~----~~~~~~~~ 409 (415)
T cd03816 349 FKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL----RWDENWDR 409 (415)
T ss_pred CCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc----CHHHHHHH
Confidence 999888883 489994 9999999999999983 55677777777777643 45554443
No 75
>PHA01630 putative group 1 glycosyl transferase
Probab=99.79 E-value=1.2e-17 Score=181.98 Aligned_cols=211 Identities=17% Similarity=0.103 Sum_probs=151.6
Q ss_pred hcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCC
Q 004512 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG 325 (748)
Q Consensus 246 ~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 325 (748)
.+|.|...+......+.+. |.. ...++.++|+|||++.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 4788888887666555431 110 0125778999999988864210 0124
Q ss_pred ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004512 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (748)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~ 405 (748)
+.++++++|+.+.||++.+|+|++++.+++|+++ |+++|. +.. +. ++. +..+
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-----~~~--~~--~l~----------~~~~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-----NML--DP--RLF----------GLNG----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC-----ccc--ch--hhc----------cccc-----
Confidence 5566677889999999999999999988887765 877772 111 11 110 1011
Q ss_pred EecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC--
Q 004512 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-- 483 (748)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 483 (748)
+.+.++.+++..+|+.||+||+||..||||++++||||||. |+|+|..+|.++.+.
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~---------------------PVIas~~gg~~E~i~~~ 251 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL---------------------DVVVTEKGAWSEWVLSN 251 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC---------------------CEEEeCCCCchhhccCC
Confidence 12468899999999999999999999999999999999975 899999988888773
Q ss_pred -CcEE--------------------eCCCCHHHHHHHHHHHhcCC-HHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHH
Q 004512 484 -GAIR--------------------VNPWNVDAVADAMDSALQME-NQEKILRHEK-HYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 484 -~ai~--------------------VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~-~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
+|++ ++| |.++++++|.++|..+ +++++.++++ ...+.+++++...++.+++-++
T Consensus 252 ~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 252 LDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3444 455 7888999999999875 2344544444 4556678999999999888765
No 76
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.78 E-value=6.2e-17 Score=180.78 Aligned_cols=215 Identities=14% Similarity=0.106 Sum_probs=152.2
Q ss_pred hhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-
Q 004512 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (748)
Q Consensus 245 l~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~- 323 (748)
-.+|.|.+.+....+.+.+. . .....++.++|+|||++.|.+....+ ..+
T Consensus 171 ~~ad~vi~~S~~~~~~l~~~----~---------------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~ 221 (397)
T TIGR03087 171 ARFDAATFVSRAEAELFRRL----A---------------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYP 221 (397)
T ss_pred hhCCeEEEcCHHHHHHHHHh----C---------------CCCCCCeEEeecccchhhcCCCcccc----------CCCC
Confidence 45677777777666555321 0 01123677899999999886532110 112
Q ss_pred CCceEEEEeccccccCCHHHHH----HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004512 324 DGKIVILGVDDMDLFKGISLKF----LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~ 399 (748)
.++++|+++||+++.||+..++ .++..+.+++|+++ |+++|. +++ .+++++. ..
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~----~~---- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALA----AL---- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhc----cC----
Confidence 3567899999999999999887 56667777888877 888873 222 1233331 11
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEecCC-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc
Q 004512 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (748)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (748)
..|++ .|.++ ++..+|+.||++|+||. .||++++.+||||||. |+|+|..++.
T Consensus 280 --~~V~~-~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~---------------------PVV~t~~~~~ 333 (397)
T TIGR03087 280 --PGVTV-TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAK---------------------PVVASPEAAE 333 (397)
T ss_pred --CCeEE-eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCC---------------------CEEecCcccc
Confidence 12664 46665 78999999999999996 6999999999999975 7888876432
Q ss_pred cccc--CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHH
Q 004512 479 SPSL--SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDL 538 (748)
Q Consensus 479 ~~~l--~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl~~l 538 (748)
.... ..|+++. .|++++|++|.++++++ +.++.+.+++++++. ++++...++.+.+-+
T Consensus 334 ~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 334 GIDALPGAELLVA-ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred cccccCCcceEeC-CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 2111 2478886 89999999999999865 466777788899885 689998888877655
No 77
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=3.4e-17 Score=177.76 Aligned_cols=260 Identities=16% Similarity=0.184 Sum_probs=177.2
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHH-HHHhhhcCEEEeeCHHHHHHHHHHHHHHh
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSSCSRML 269 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~i-l~~ll~~DlIgF~t~~~~~~Fl~~~~r~l 269 (748)
.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.|.+.+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986544322222222 46788889996532211110 111112 22456788888888766655432 0
Q ss_pred CccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHH
Q 004512 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349 (748)
Q Consensus 270 g~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~ 349 (748)
+ ....++.++|+|+|...+..... . .........++++|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA-----L-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch-----h-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01136788999999987754311 0 0111111246789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEec
Q 004512 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (748)
Q Consensus 350 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 429 (748)
++. ++.|+++|. ++.. .++.+++++.+.. ..|++ .|.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~~-~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVRF-LGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEEE-cCCCCHHHHHHHHHhCCEEEeC
Confidence 874 355887773 3332 3344444333211 13654 5799999999999999999999
Q ss_pred CC--CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC----CcEEeCCCCHHHHHHHHHHH
Q 004512 430 CV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----GAIRVNPWNVDAVADAMDSA 503 (748)
Q Consensus 430 S~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~VnP~d~~~~A~ai~~a 503 (748)
|. .||||++.+|||+||. |+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~---------------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l 329 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGK---------------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRL 329 (357)
T ss_pred CcccccccchHHHHHHHcCC---------------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHH
Confidence 96 5999999999999975 899999888887662 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHhC
Q 004512 504 LQMENQEKILRHEKHYKYISSH 525 (748)
Q Consensus 504 L~m~~~er~~r~~~~~~~V~~~ 525 (748)
++++ ++++.+.++.++++.++
T Consensus 330 ~~~~-~~~~~~~~~~~~~~~~~ 350 (357)
T cd03795 330 LEDP-ELRERLGEAARERAEEE 350 (357)
T ss_pred HHCH-HHHHHHHHHHHHHHHHh
Confidence 9965 46677777788887653
No 78
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.76 E-value=1e-16 Score=172.86 Aligned_cols=240 Identities=14% Similarity=0.045 Sum_probs=162.3
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
-|+|++|+....++ + .+..+.++.+++|..++.... .........+.+.+-+......+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 48999999887765 2 234578899999987643111 122333444544443332221110
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (748)
.. .++.++|+|||++.|... ..++.+|+++||+.+.||+..+++|+.+
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 195 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR 195 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh
Confidence 00 367789999999888541 1245689999999999999999998754
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
++++ |+++|.. .+...+...+.+... ++ ..|++ .|.++.+++..+|+.||++++||
T Consensus 196 -----~~~~----l~i~G~~-----~~~~~~~~~~~~~~~-~~--------~~v~~-~G~~~~~~~~~~~~~~d~~v~ps 251 (335)
T cd03802 196 -----AGIP----LKLAGPV-----SDPDYFYREIAPELL-DG--------PDIEY-LGEVGGAEKAELLGNARALLFPI 251 (335)
T ss_pred -----cCCe----EEEEeCC-----CCHHHHHHHHHHhcc-cC--------CcEEE-eCCCCHHHHHHHHHhCcEEEeCC
Confidence 3444 8877743 221222222222210 11 13664 47899999999999999999999
Q ss_pred C-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcC
Q 004512 431 V-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQM 506 (748)
Q Consensus 431 ~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m 506 (748)
. .||||++++||||||. |+|+|+.+|..+.+. +|+++++ +++++++|.+++.+
T Consensus 252 ~~~E~~~~~~lEAma~G~---------------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~ 308 (335)
T cd03802 252 LWEEPFGLVMIEAMACGT---------------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRL 308 (335)
T ss_pred cccCCcchHHHHHHhcCC---------------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhcc
Confidence 7 5999999999999975 899999999988883 4899987 99999999998765
Q ss_pred CHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Q 004512 507 ENQEKILRHEKHYKYI-SSHDVAYWAKSIDQ 536 (748)
Q Consensus 507 ~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~ 536 (748)
+.+ ..++++ .++++..-++++++
T Consensus 309 ~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 309 DRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 431 223333 45676666666554
No 79
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.76 E-value=1.1e-16 Score=175.09 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=143.3
Q ss_pred hhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc
Q 004512 244 LLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF 323 (748)
Q Consensus 244 ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~ 323 (748)
+..+|.|...+....+.+... .+ . ...++|+|+|.+.|....
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~---------------- 192 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE---------------- 192 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------
Confidence 456788888777666655421 11 1 235688999988775321
Q ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004512 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~p 403 (748)
..+++++++||+.+.||+..+++|++++ | ++ |+++|. +++.++++ + .. . ..
T Consensus 193 ~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~----~---~~----~----~~ 243 (351)
T cd03804 193 EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLR----A---KA----G----PN 243 (351)
T ss_pred CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHH----h---hc----C----CC
Confidence 2345799999999999999999999865 3 44 777773 34333332 2 11 1 13
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
|.++ |.++.+++.++|+.||++++||. ||||++++|||+||. |+|+|..+|..+.+.
T Consensus 244 V~~~-g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~---------------------Pvi~~~~~~~~e~i~ 300 (351)
T cd03804 244 VTFL-GRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT---------------------PVIAYGKGGALETVI 300 (351)
T ss_pred EEEe-cCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC---------------------CEEEeCCCCCcceee
Confidence 6654 68999999999999999999999 999999999999975 899999999888773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 004512 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (748)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 533 (748)
.|++++|.|++++|++|.+++++++. ..+.+++.+.++++.+..++
T Consensus 301 ~~~~G~~~~~~~~~~la~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 301 DGVTGILFEEQTVESLAAAVERFEKNEDF----DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred CCCCEEEeCCCCHHHHHHHHHHHHhCccc----CHHHHHHHHHhcCHHHHHHH
Confidence 59999999999999999999998741 22334445555655555443
No 80
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.76 E-value=1.8e-16 Score=172.68 Aligned_cols=265 Identities=13% Similarity=0.009 Sum_probs=174.1
Q ss_pred CEEEEeCcchh--hHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHH-----HHhhhcCEEEeeCHHHHHHHHHH
Q 004512 192 DYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLSS 264 (748)
Q Consensus 192 DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il-----~~ll~~DlIgF~t~~~~~~Fl~~ 264 (748)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 55566554433 33333433 267888888853111111110 111111 1245678888877655544321
Q ss_pred HHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--CCceEEEEeccccccCCHH
Q 004512 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGIS 342 (748)
Q Consensus 265 ~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~ 342 (748)
..+ .. . .++|+|+|...+... ...++++ .+++.++++||+.+.||+.
T Consensus 161 ---~~~---------------~~-~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG---------------RD-S--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC---------------CC-C--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 11 1 679999998766430 1122222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004512 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (748)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (748)
.+++|+.++.. + +.|+++|... ...++.+.+.+ + ++.. ..|+ +.|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~---~----~~l~ivG~~~-----~~~~~~~~~~~---~----~~~~--~~V~-~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS---G----KKLVIVGNAD-----HNTPYGKLLKE---K----AAAD--PRII-FVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc---C----ceEEEEcCCC-----CcchHHHHHHH---H----hCCC--CcEE-EccccChHHHHHHHHh
Confidence 99999987632 3 4588888432 11233333332 1 1211 1355 4578999999999999
Q ss_pred CcEEEecCCC-ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-CcEEeCCCCHHHHHHHH
Q 004512 423 AECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAM 500 (748)
Q Consensus 423 ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~VnP~d~~~~A~ai 500 (748)
||++++||.. ||||++++|||+||. |+|+|..+|..+.+. +|..++|.|. +|++|
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G~---------------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i 324 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYGC---------------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLL 324 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcCC---------------------CEEEecCCccceeecCCeeEecCchH--HHHHH
Confidence 9999999999 999999999999975 899999998888774 6888988776 99999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHH
Q 004512 501 DSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDL 538 (748)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l 538 (748)
.+++++++ .+....++.++++.+ +++..-+++|++.+
T Consensus 325 ~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 325 EELEADPE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999874 555566777777764 78888777776543
No 81
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.75 E-value=1.5e-16 Score=169.59 Aligned_cols=243 Identities=20% Similarity=0.161 Sum_probs=166.4
Q ss_pred CEEEEeCc-chhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhC
Q 004512 192 DYVWIHDY-HLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (748)
Q Consensus 192 DiVwvhDy-hl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg 270 (748)
|+|++|++ ...++..+. .+. +.++.+.+|..++..... ..+........+..+|.+.+.+....+.+.+.. +
T Consensus 83 dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~ 155 (353)
T cd03811 83 DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL----G 155 (353)
T ss_pred CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHhh----c
Confidence 89999988 444444444 333 789999999887642211 111111223345678888888876665554311 1
Q ss_pred ccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHH
Q 004512 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350 (748)
Q Consensus 271 ~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 350 (748)
....++.++|+|+|...+...... . .. .....++.+++++||+++.||+..+++|+.+
T Consensus 156 ---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~ 213 (353)
T cd03811 156 ---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LE-LGIPPDGPVILAVGRLSPQKGFDTLIRAFAL 213 (353)
T ss_pred ---------------CCccccEEecCCcChhhcCcccch-----h-hh-cCCCCCceEEEEEecchhhcChHHHHHHHHH
Confidence 013467889999999877653211 0 00 0112567899999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 351 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
+.+++++++ |+++|. ++... ++.+++.+.|.. + .|.+. +. .+++..+|+.||+++.||
T Consensus 214 l~~~~~~~~----l~i~G~-----~~~~~----~~~~~~~~~~~~----~--~v~~~-g~--~~~~~~~~~~~d~~i~ps 271 (353)
T cd03811 214 LRKEGPDAR----LVILGD-----GPLRE----ELEALAKELGLA----D--RVHFL-GF--QSNPYPYLKAADLFVLSS 271 (353)
T ss_pred hhhcCCCce----EEEEcC-----CccHH----HHHHHHHhcCCC----c--cEEEe-cc--cCCHHHHHHhCCEEEeCc
Confidence 988777765 887773 23322 333444444321 1 25544 44 457899999999999999
Q ss_pred CCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHH---HHHHHHh
Q 004512 431 VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA---DAMDSAL 504 (748)
Q Consensus 431 ~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A---~ai~~aL 504 (748)
..||||++++|||+||. |+|+|+.+|..+.+. +|+++++.|.++++ ++|...+
T Consensus 272 ~~e~~~~~~~Ea~~~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 330 (353)
T cd03811 272 RYEGFPNVLLEAMALGT---------------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLL 330 (353)
T ss_pred ccCCCCcHHHHHHHhCC---------------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhcc
Confidence 99999999999999975 899999999888873 48999999999995 4444555
Q ss_pred cC
Q 004512 505 QM 506 (748)
Q Consensus 505 ~m 506 (748)
..
T Consensus 331 ~~ 332 (353)
T cd03811 331 LD 332 (353)
T ss_pred CC
Confidence 44
No 82
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.75 E-value=1.6e-16 Score=172.98 Aligned_cols=194 Identities=17% Similarity=0.180 Sum_probs=144.7
Q ss_pred EEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccc--cCCHHHHHHHHHHHHHh-CCCCCCce
Q 004512 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL--FKGISLKFLAMGQLLEQ-HPDLRGKV 362 (748)
Q Consensus 289 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~v 362 (748)
.++.++|+|||.+.|.+.. ....++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 3678899999998875431 12233333 34566666666654 89999999999988665 444 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC-hhhHHHHHHhCcEEEecCCCccCCchhhh
Q 004512 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS-TQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (748)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~E 441 (748)
.++++|.. +...+ . .+ . ..|.+ .+.++ .+++..+|+.||++++||..||||++.+|
T Consensus 227 ~~~i~G~~-----~~~~~------~---~~----~----~~v~~-~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGAS-----DPEIP------P---DL----P----FPVHY-LGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCC-----chhhh------c---cC----C----CceEe-cCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 48777742 11100 0 11 1 12554 46777 88999999999999999999999999999
Q ss_pred hhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 004512 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (748)
Q Consensus 442 ama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (748)
||+||. |+|+|..+|..+.+. .|+++++.|++++|++|.++++.++ ++..+.++.
T Consensus 284 am~~g~---------------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~ 341 (365)
T cd03825 284 ALACGT---------------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAA 341 (365)
T ss_pred HHhcCC---------------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHH
Confidence 999975 899999988888773 4899999999999999999998654 566667777
Q ss_pred HHHHH-hCCHHHHHHHHHHHHH
Q 004512 519 YKYIS-SHDVAYWAKSIDQDLE 539 (748)
Q Consensus 519 ~~~V~-~~~~~~W~~~fl~~l~ 539 (748)
++++. .+++...++.|++-++
T Consensus 342 ~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 342 RELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHh
Confidence 88875 5889999988887654
No 83
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.72 E-value=1.4e-15 Score=171.60 Aligned_cols=286 Identities=15% Similarity=0.158 Sum_probs=178.5
Q ss_pred HHHHHHhCCCCCEEEEeCcchhhHHHHHHh-hccCCeEEEEecCCCCc-hhHhhcCcchHHHHHHh-hhcCEEEeeCHHH
Q 004512 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRK-RFHRVKVGFFLHSPFPS-SEIYRTLPVRDEILKSL-LNSDLIGFHTFDY 257 (748)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfPs-~e~fr~lp~r~~il~~l-l~~DlIgF~t~~~ 257 (748)
.++++..+| |+|++|.+.++ |.++.. +..++++.++.|.-... ...++.+ ..+.+.+ -.+|.|..++...
T Consensus 117 ~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 117 RRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred HHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHH
Confidence 345566677 79998877754 444433 23457777665543222 1222211 2233333 3479999999888
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEecccc
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld 336 (748)
.+.|.+ +|+. .. +.++|++ +.+.+... ........+++++ +++++++++++.
T Consensus 190 ~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~- 242 (425)
T PRK05749 190 AERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH- 242 (425)
T ss_pred HHHHHH-----cCCC---------------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC-
Confidence 877753 2321 12 4455652 33322111 1112234566777 678889999875
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC-CCCC-----ccEEEecCC
Q 004512 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG-KPGY-----EPIVIIKEP 410 (748)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g-~~~~-----~pV~~~~~~ 410 (748)
.|+...+++|+.++++++|+++ |+++| ++++. .+++++++++.+..+. ..++ ...+++.+
T Consensus 243 -~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~- 308 (425)
T PRK05749 243 -EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD- 308 (425)
T ss_pred -chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe-
Confidence 6889999999999998899876 77765 34442 1234455444332210 0000 01222322
Q ss_pred CChhhHHHHHHhCcEEEe-cCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----ccc-CC
Q 004512 411 LSTQDKVPYYAIAECCVV-NCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL-SG 484 (748)
Q Consensus 411 v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-~~ 484 (748)
+..|+..+|+.||++++ +|..||+|++++|||+||. |+|++...|.. +.+ .+
T Consensus 309 -~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~---------------------PVI~g~~~~~~~e~~~~~~~~ 366 (425)
T PRK05749 309 -TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV---------------------PVISGPHTFNFKEIFERLLQA 366 (425)
T ss_pred -cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC---------------------CEEECCCccCHHHHHHHHHHC
Confidence 36799999999999666 6888999999999999975 78887654432 222 35
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
|.++.|.|++++|++|.++++++ +.++.+.++.++++.++ ..=.+.+++.+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~ 418 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN--QGALQRTLQLLE 418 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC--ccHHHHHHHHHH
Confidence 78888999999999999999865 46777788899999876 233344444444
No 84
>PLN02275 transferase, transferring glycosyl groups
Probab=99.72 E-value=1.1e-16 Score=177.41 Aligned_cols=237 Identities=11% Similarity=-0.010 Sum_probs=155.6
Q ss_pred CCEEEEeCcchh--hHHHHHHhhccCCeEEEEecCCCCchhHhhc-C---cc----hHHHHHHh-hhcCEEEeeCHHHHH
Q 004512 191 EDYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L---PV----RDEILKSL-LNSDLIGFHTFDYAR 259 (748)
Q Consensus 191 ~DiVwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfPs~e~fr~-l---p~----r~~il~~l-l~~DlIgF~t~~~~~ 259 (748)
.|+|++|..+.+ +++..+-.+..++|+.+++|..+.+ .+.. . +. ...+.+.+ -.+|.|...+....+
T Consensus 101 ~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~ 178 (371)
T PLN02275 101 PDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQH 178 (371)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 389999987643 2333333334568899999975421 1100 0 10 01111222 346777777766555
Q ss_pred HHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccC
Q 004512 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFK 339 (748)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~K 339 (748)
...+. . |.. +.++|+|+ .+.|.+... . ..+ ..+.+.+++++||+.+.|
T Consensus 179 ~l~~~----~----------------g~~--i~vi~n~~-~~~f~~~~~-----~--~~~--~~~~~~~i~~~grl~~~k 226 (371)
T PLN02275 179 ELDQN----W----------------GIR--ATVLYDQP-PEFFRPASL-----E--IRL--RPNRPALVVSSTSWTPDE 226 (371)
T ss_pred HHHHh----c----------------CCC--eEEECCCC-HHHcCcCCc-----h--hcc--cCCCcEEEEEeCceeccC
Confidence 44320 0 111 56788884 466654311 0 111 113456788999999999
Q ss_pred CHHHHHHHHHHHHH-----------------hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 340 GISLKFLAMGQLLE-----------------QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 340 Gi~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
|+..+++|+..+.. ++|++ .|+++| +|++.++ +++++++.+. .
T Consensus 227 ~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i----~l~ivG-----~G~~~~~----l~~~~~~~~l-------~ 286 (371)
T PLN02275 227 DFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRL----LFIITG-----KGPQKAM----YEEKISRLNL-------R 286 (371)
T ss_pred CHHHHHHHHHHHHhhhhhccccccccccccccCCCe----EEEEEe-----CCCCHHH----HHHHHHHcCC-------C
Confidence 99999999988742 34554 488888 4554444 4444444322 2
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEecC---CCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcc
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVVNC---VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (748)
.|+++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||||. |+|+|..+|..
T Consensus 287 ~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~---------------------PVVa~~~gg~~ 345 (371)
T PLN02275 287 HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL---------------------PVCAVSYSCIG 345 (371)
T ss_pred ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC---------------------CEEEecCCChH
Confidence 4777777889999999999999999753 34899999999999975 89999998888
Q ss_pred cccC---CcEEeCCCCHHHHHHHHHHHh
Q 004512 480 PSLS---GAIRVNPWNVDAVADAMDSAL 504 (748)
Q Consensus 480 ~~l~---~ai~VnP~d~~~~A~ai~~aL 504 (748)
+.+. +|++|+ |++++|++|.++|
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 8873 489997 6999999998865
No 85
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.72 E-value=2e-15 Score=170.06 Aligned_cols=296 Identities=20% Similarity=0.183 Sum_probs=202.0
Q ss_pred CCEEEEeCcchhhHHHHHHhh---ccCCeEEEEecCC-----CC-chhHhhcCcc---h---------HHHH-HHhhhcC
Q 004512 191 EDYVWIHDYHLMVLPSFLRKR---FHRVKVGFFLHSP-----FP-SSEIYRTLPV---R---------DEIL-KSLLNSD 248 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~---~~~~~ig~flH~P-----fP-s~e~fr~lp~---r---------~~il-~~ll~~D 248 (748)
.|||++||||+.|+|.++++. ...++.+|++|.- |+ ...-...||. . -..+ -++..||
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 389999999999999999997 7789999999943 33 1111223441 0 0223 3467778
Q ss_pred EEEeeCHHHHHHHHHHHHHHhCccccccCcee-EEEecCeEEEEEEeeccCCcccccccccC-----------chhHHHH
Q 004512 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYI-GLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKV 316 (748)
Q Consensus 249 lIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~-~i~~~gr~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~ 316 (748)
.|..-++.|+..-.. ...| .|.. .+.+ +..++.-+=+|||.+.+.+.... +...+..
T Consensus 211 ~vttVSptYa~Ei~t---~~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk 279 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENK 279 (487)
T ss_pred EEEEECHHHHHhhcc---cccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHH
Confidence 888888888766541 0010 0000 0111 12455666778888776543210 0112223
Q ss_pred HHHHHHc--C---CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004512 317 KELKEKF--D---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (748)
Q Consensus 317 ~~lr~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 391 (748)
..|.+++ . +.+++..|+|++..||++.+++|+..++++. ++ ||++|. + + .+++..+..++++
T Consensus 280 ~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~-----g-d-~~le~~~~~la~~ 346 (487)
T COG0297 280 VALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGT-----G-D-PELEEALRALASR 346 (487)
T ss_pred HHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEec-----C-c-HHHHHHHHHHHHh
Confidence 4456666 2 4699999999999999999999999999987 55 777773 2 2 3677888999888
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEE
Q 004512 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (748)
Q Consensus 392 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (748)
+..++. +.-..+..-...+|+.||++++||..||+||+-+++|.-|+ ++|
T Consensus 347 ~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGt---------------------vpI 396 (487)
T COG0297 347 HPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT---------------------LPI 396 (487)
T ss_pred cCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCC---------------------cce
Confidence 765432 22234566777899999999999999999999999999864 789
Q ss_pred EeCCCCcccccC-----------CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHH
Q 004512 472 VSEFIGCSPSLS-----------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI--SSHDVAYWAKSIDQDL 538 (748)
Q Consensus 472 ~Se~~G~~~~l~-----------~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V--~~~~~~~W~~~fl~~l 538 (748)
+.+.+|.++.+. +|+++.|.|+++++.||.+|+..-...... +++..... ...++..=+.+|++--
T Consensus 397 v~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~-w~~~~~~~m~~d~sw~~sa~~y~~lY 475 (487)
T COG0297 397 VRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLL-WRKVQPNAMGADFSWDLSAKEYVELY 475 (487)
T ss_pred EcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHH-HHHHHHhhcccccCchhHHHHHHHHH
Confidence 999999988773 278998889999999999999764322110 22222222 3566777777777655
Q ss_pred HHH
Q 004512 539 ERA 541 (748)
Q Consensus 539 ~~~ 541 (748)
+..
T Consensus 476 ~~~ 478 (487)
T COG0297 476 KPL 478 (487)
T ss_pred HHH
Confidence 554
No 86
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.67 E-value=1.1e-15 Score=149.75 Aligned_cols=155 Identities=21% Similarity=0.318 Sum_probs=120.1
Q ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHHh-CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
.++++|+++||+++.||+..+++|+..+.++ .+++. |+++|. +.. ...+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~----~~~~~~~~~~~~~~----~-- 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEY----KKELKNLIEKLNLK----E-- 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCH----HHHHHHHHHHTTCG----T--
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----ccc----cccccccccccccc----c--
Confidence 5789999999999999999999999999875 66654 877762 222 23344454443321 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (748)
.|.++ +.++.+++.++|+.||+++.||..||+|++++|||+||. |+|+|..+|..+.+
T Consensus 74 ~i~~~-~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~---------------------pvI~~~~~~~~e~~ 131 (172)
T PF00534_consen 74 NIIFL-GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC---------------------PVIASDIGGNNEII 131 (172)
T ss_dssp TEEEE-ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT----------------------EEEEESSTHHHHHS
T ss_pred ccccc-ccccccccccccccceecccccccccccccccccccccc---------------------ceeeccccCCceee
Confidence 36665 467789999999999999999999999999999999964 89999988888877
Q ss_pred C---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 004512 483 S---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520 (748)
Q Consensus 483 ~---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 520 (748)
. .|++++|.|+++++++|.+++.++ +.++.+.++.++
T Consensus 132 ~~~~~g~~~~~~~~~~l~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 132 NDGVNGFLFDPNDIEELADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp GTTTSEEEESTTSHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ccccceEEeCCCCHHHHHHHHHHHHCCH-HHHHHHHHHhcC
Confidence 3 479999999999999999999987 345555555544
No 87
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.58 E-value=1e-14 Score=147.94 Aligned_cols=152 Identities=25% Similarity=0.328 Sum_probs=114.5
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCCCceeeecCceEEeecCCCccee
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~~l~l~aehG~~i~~~~~~~w~~ 666 (748)
+|++||||||++.. ...+++++.++|++|+++ +..|+|+|||+...+.+++..+ +.+++++||++++.+++..|..
T Consensus 1 li~~D~DgTL~~~~--~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~~ 76 (204)
T TIGR01484 1 LLFFDLDGTLLDPN--AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYIE 76 (204)
T ss_pred CEEEeCcCCCcCCC--CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEEc
Confidence 58999999999842 245789999999999986 4899999999999999999875 4889999999999765544543
Q ss_pred cccCCCcchH------HHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcC-CCeEEe-e
Q 004512 667 CSLTRDFDWK------EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN-EPVVVK-R 738 (748)
Q Consensus 667 ~~~~~~~~w~------~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~-~~v~v~-~ 738 (748)
....|. +.+..++..+.+.++|..+|.|.+++++||++. +.......++...++....+ .++.+. .
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 150 (204)
T TIGR01484 77 ----PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYV 150 (204)
T ss_pred ----ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEe
Confidence 112233 333445555667889999999999999999986 11122344666666655332 468888 6
Q ss_pred CCeEEEEecC
Q 004512 739 GQHIVEVKPQ 748 (748)
Q Consensus 739 Gk~vvEvrP~ 748 (748)
|..++||.|+
T Consensus 151 ~~~~~ev~p~ 160 (204)
T TIGR01484 151 GKTDLEVLPA 160 (204)
T ss_pred cCCEEEEecC
Confidence 9999999984
No 88
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.55 E-value=3.5e-14 Score=149.07 Aligned_cols=190 Identities=15% Similarity=0.214 Sum_probs=147.7
Q ss_pred HHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCCH
Q 004512 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGI 341 (748)
Q Consensus 263 ~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi 341 (748)
...+|.+++++.++.+.. +.-.-...+|.++||-+++..|.+.... +. .+...|+.++||-+.||+
T Consensus 144 ~~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGi 210 (426)
T KOG1111|consen 144 ANIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGI 210 (426)
T ss_pred cCCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccch
Confidence 345677788888876532 3222234588999999999999875321 22 355889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHH
Q 004512 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (748)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 421 (748)
++++..+.++.++||+.+ ++++| +||...++++.+++. +. ..+|+++ |.++.+++-..|.
T Consensus 211 Dll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~l------~~rV~~l-G~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 211 DLLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----FL------QDRVVML-GTVPHDRVRDVLV 270 (426)
T ss_pred HHHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----hc------cCceEEe-cccchHHHHHHHh
Confidence 999999999999999988 88776 566554555444443 21 1257755 6999999999999
Q ss_pred hCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCc-EEeCCCCHHHHHHHH
Q 004512 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA-IRVNPWNVDAVADAM 500 (748)
Q Consensus 422 ~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~VnP~d~~~~A~ai 500 (748)
..|||+.||+.|.|+++..||+.||. ++|.+..+|..+.|... +..-+-.++++++++
T Consensus 271 ~G~IFlntSlTEafc~~ivEAaScGL---------------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v 329 (426)
T KOG1111|consen 271 RGDIFLNTSLTEAFCMVIVEAASCGL---------------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAV 329 (426)
T ss_pred cCcEEeccHHHHHHHHHHHHHHhCCC---------------------EEEEeecCCccccCCccceeccCCChHHHHHHH
Confidence 99999999999999999999999975 78888999999998544 435555788888888
Q ss_pred HHHhcC
Q 004512 501 DSALQM 506 (748)
Q Consensus 501 ~~aL~m 506 (748)
.+|++.
T Consensus 330 ~~ai~~ 335 (426)
T KOG1111|consen 330 EKAITK 335 (426)
T ss_pred HHHHHH
Confidence 888864
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.54 E-value=6.6e-13 Score=147.33 Aligned_cols=266 Identities=12% Similarity=0.107 Sum_probs=165.5
Q ss_pred hCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcch-HHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 187 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r-~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
++.++.++|.+..-...+... .+..++++-+|--|+..... -+.. ...-+.+-.||+|...+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344557888876555444343 45567777766444421110 0111 11122345689988777765543321
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHH
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (748)
+ + .++.++|+|+|.+.|.+....+ .. .+.+ ...++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~-~~--~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPP-PP--PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccC-CC--hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 2567899999999986542211 10 0111 114678999999999966664 33
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcE
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 425 (748)
.+ +.+.+|+++ |++||... ...+ ...+ .. ...|+++ |.++.+++.++|+.||+
T Consensus 224 ~~---la~~~p~~~----~vliG~~~-----~~~~----~~~~----~~------~~nV~~~-G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 EA---LAKARPDWS----FVLIGPVD-----VSID----PSAL----LR------LPNVHYL-GPKPYKELPAYLAGFDV 276 (373)
T ss_pred HH---HHHHCCCCE----EEEECCCc-----CccC----hhHh----cc------CCCEEEe-CCCCHHHHHHHHHhCCE
Confidence 33 345688876 88787421 1001 1111 00 1246655 68999999999999999
Q ss_pred EEecCC-----CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCCcEEeCCCCHHHHHHHH
Q 004512 426 CVVNCV-----RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAM 500 (748)
Q Consensus 426 ~vvtS~-----~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~VnP~d~~~~A~ai 500 (748)
+++|+. +.++++..+||||||. |+|+|.+.++.+. .++..+.+.|+++++++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~---------------------PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai 334 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK---------------------PVVATPLPEVRRY-EDEVVLIADDPEEFVAAI 334 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC---------------------CEEecCcHHHHhh-cCcEEEeCCCHHHHHHHH
Confidence 999985 3577899999999975 7888876554433 234555567999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 004512 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 539 (748)
.++|..+..++..+. .+.+.+|+|..=++.+++.|.
T Consensus 335 ~~~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 335 EKALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHH
Confidence 998876543433322 226888999888888886554
No 90
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.47 E-value=1.4e-11 Score=137.29 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=126.2
Q ss_pred EEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCHHHHHHHHHHHHHh----CCCCCCce
Q 004512 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ----HPDLRGKV 362 (748)
Q Consensus 290 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~v 362 (748)
+|.+++++|+.+.+.+. + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 56667888886543321 1 123466666 4688999999999999999999999876521 34433
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhh
Q 004512 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKY 442 (748)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 442 (748)
++.+++ +++ ++++++++... + ..|.++ |++ +++..+|++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~~-G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPVKVR-GFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCeEEE-ecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 444442 222 23334433310 1 135544 555 48999999999999866 37899999
Q ss_pred hhhccCCCccccccCCCCCCCCCCCceEEEeCC-----CCccccc-CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 004512 443 TVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-----IGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (748)
Q Consensus 443 ma~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~~~l-~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (748)
|+||. |+|++.. .|..+.+ .+|.-+.+.|+++++++|.++++++++.++.+.+
T Consensus 299 ma~g~---------------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~ 357 (382)
T PLN02605 299 LIRGL---------------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSE 357 (382)
T ss_pred HHcCC---------------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99975 7888875 2333434 3333344689999999999999985556666777
Q ss_pred HHHHHHHhCCHHHHHHHHHH
Q 004512 517 KHYKYISSHDVAYWAKSIDQ 536 (748)
Q Consensus 517 ~~~~~V~~~~~~~W~~~fl~ 536 (748)
+++++...+....-++..++
T Consensus 358 ~~~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 358 NALKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHHHhcCCchHHHHHHHHHH
Confidence 78888777766655554443
No 91
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.36 E-value=5.3e-11 Score=132.74 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=141.3
Q ss_pred ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCC-CceEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004512 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNP-ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (748)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~p 403 (748)
+.++..+-|+.+-||+...|.||..+...-|+.. ....++..+++ ..+...+..++.+++.+++++.+. +| .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----c
Confidence 7889999999999999999999999988775511 12334444432 223344556677888888877532 23 2
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
++++..+.++.+.+.+++.+.+..+++..|.||+|++|||+||. |+|++..+|..+++.
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl---------------------PvvAt~~GGP~EiV~ 405 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL---------------------PVVATNNGGPAEIVV 405 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC---------------------CEEEecCCCceEEEE
Confidence 55565678888888888888888888888999999999999975 899999999999983
Q ss_pred ---CcEEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHH
Q 004512 484 ---GAIRVNPWNVD---AVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERAC 542 (748)
Q Consensus 484 ---~ai~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l~~~~ 542 (748)
+|++++| +.+ .+|++|.++.++|. .+..+.++++++|.+ +++ +.|.+.+....
T Consensus 406 ~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~ 465 (495)
T KOG0853|consen 406 HGVTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVL 465 (495)
T ss_pred cCCcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHh
Confidence 6999999 676 59999999999876 477788889999988 665 45555555443
No 92
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.34 E-value=7.2e-11 Score=124.41 Aligned_cols=198 Identities=21% Similarity=0.310 Sum_probs=143.0
Q ss_pred EEEEeeccCCccccccc-ccCchhHHHHHHHHHHcCC--ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 004512 290 SIKILPVGIHMGQFESI-MSLDVTGQKVKELKEKFDG--KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (748)
Q Consensus 290 ~i~v~p~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 366 (748)
.+.++|+|+++..+... .. ...+ +.+++++||+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999887642 00 0011 47899999999999999999999999887766 33666
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhc
Q 004512 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (748)
Q Consensus 367 i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~ 446 (748)
+|... +. ...+..++.+.+.. ..|.+ .+.++.+++..+|+.||++++||..||||++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 66332 11 12233344443321 13554 677888899999999999999999999999999999996
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-
Q 004512 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI- 522 (748)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V- 522 (748)
. |+|+|...|..+.+. + |+++++.|++++++++..++++. +.++...+..++.+
T Consensus 301 ~---------------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 358 (381)
T COG0438 301 T---------------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVE 358 (381)
T ss_pred C---------------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH
Confidence 4 889999998888884 3 78888888999999999999987 33444443344444
Q ss_pred HhCCHHHHHHHHHHHHHHH
Q 004512 523 SSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 523 ~~~~~~~W~~~fl~~l~~~ 541 (748)
..+++..-++.+.+-+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 359 EEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HhcCHHHHHHHHHHHHHHH
Confidence 4667766666555555443
No 93
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.30 E-value=6.8e-10 Score=123.36 Aligned_cols=268 Identities=11% Similarity=0.102 Sum_probs=160.1
Q ss_pred HHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHH
Q 004512 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDY 257 (748)
Q Consensus 178 ~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~ 257 (748)
.-..++++..+| |+|+.| +....++.+.+....++|+...++-..+.. ..+ .-.+|.+...+...
T Consensus 94 ~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~---~~~ad~i~~~s~~~ 158 (380)
T PRK13609 94 KRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWV---HREVDRYFVATDHV 158 (380)
T ss_pred HHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccc---cCCCCEEEECCHHH
Confidence 334456666677 788885 555667776666555677653332111110 011 12578888877655
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcc-cccccccCchhHHHHHHHHHHc---CCce-EEEEe
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG-QFESIMSLDVTGQKVKELKEKF---DGKI-VILGV 332 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~-~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~V 332 (748)
.+.+.+ .|++ ..+|.++ |++.. .|.... + ...+++++ ++++ +++..
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il~~~ 209 (380)
T PRK13609 159 KKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILLIMA 209 (380)
T ss_pred HHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEEEEc
Confidence 444432 1321 1133333 44332 232211 1 12345555 2444 56667
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004512 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (748)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~ 412 (748)
|++...||+...++++.+ .|+++ ++++++. ++ .+++++++++++.+ ..|+++ +.+
T Consensus 210 G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~----~~---~~~~~l~~~~~~~~--------~~v~~~-g~~- 264 (380)
T PRK13609 210 GAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK----NE---ALKQSLEDLQETNP--------DALKVF-GYV- 264 (380)
T ss_pred CCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC----CH---HHHHHHHHHHhcCC--------CcEEEE-ech-
Confidence 899999999998888642 35554 7666532 11 23345555544322 146765 555
Q ss_pred hhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeC-CCCcc----ccc-CCcE
Q 004512 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCS----PSL-SGAI 486 (748)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~ai 486 (748)
+++..+|+.||+++. ++.|++.+|||+||. |+|++. ..|.. ..+ ..|.
T Consensus 265 -~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~---------------------PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 265 -ENIDELFRVTSCMIT----KPGGITLSEAAALGV---------------------PVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred -hhHHHHHHhccEEEe----CCCchHHHHHHHhCC---------------------CEEECCCCCCcchHHHHHHHhCCc
Confidence 468899999999874 445899999999975 777765 34421 122 2344
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 004512 487 RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 541 (748)
.+.+.|+++++++|.++++++. .++.+.++.+++...+++...++.+++.+...
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred EEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 5556899999999999998653 55555666677777788888888887766543
No 94
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.29 E-value=1.9e-10 Score=126.48 Aligned_cols=256 Identities=13% Similarity=0.083 Sum_probs=157.5
Q ss_pred HHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHH
Q 004512 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (748)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~F 261 (748)
+++...+| |+|+.|+....+... +..+..+.|+.++.|..+|.. .+.++ ...+|.+...+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---h
Confidence 34444455 899999855443333 444556788887767555421 01111 11345544333210 0
Q ss_pred HHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCC
Q 004512 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKG 340 (748)
Q Consensus 262 l~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KG 340 (748)
. . ....++.++|+|+|.+.+.+. .. ..++ .. .+.++|+.+++....|+
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~ 197 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARV 197 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHH
Confidence 0 0 112468889999998765431 10 0111 11 36788899999999999
Q ss_pred HHHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHH
Q 004512 341 ISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (748)
Q Consensus 341 i~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 419 (748)
+..++ +|+.++.+ .| .+++++|. +. .+++++.+ + . +. . |.+. +.+ +++..+
T Consensus 198 ~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~-~~~~~~~~----~-~----~~---~-v~~~-g~~--~~~~~~ 249 (357)
T PRK00726 198 LNEAVPEALALLPE-AL-----QVIHQTGK-----GD-LEEVRAAY----A-A----GI---N-AEVV-PFI--DDMAAA 249 (357)
T ss_pred HHHHHHHHHHHhhh-Cc-----EEEEEcCC-----Cc-HHHHHHHh----h-c----CC---c-EEEe-ehH--hhHHHH
Confidence 87776 88887743 22 23555552 22 12222221 1 1 21 1 4544 444 689999
Q ss_pred HHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC----c----cccc---CCcEEe
Q 004512 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SGAIRV 488 (748)
Q Consensus 420 y~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ai~V 488 (748)
|+.||+++.+| | +.+.+|||+||. |+|++-..| . ++.+ ..|+++
T Consensus 250 ~~~~d~~i~~~---g-~~~~~Ea~~~g~---------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~ 304 (357)
T PRK00726 250 YAAADLVICRA---G-ASTVAELAAAGL---------------------PAILVPLPHAADDHQTANARALVDAGAALLI 304 (357)
T ss_pred HHhCCEEEECC---C-HHHHHHHHHhCC---------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEE
Confidence 99999999877 3 588999999975 666654432 1 2334 247889
Q ss_pred CCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004512 489 NPWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (748)
Q Consensus 489 nP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 538 (748)
+|.| +++++++|.++++++ +.++.+.+..+++..+.+...-++.+++.+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 305 PQSDLTPEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred EcccCCHHHHHHHHHHHHcCH-HHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 9888 999999999999974 466667777888887787777777776554
No 95
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.28 E-value=1.8e-10 Score=116.02 Aligned_cols=111 Identities=20% Similarity=0.227 Sum_probs=82.2
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004512 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (748)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~ 410 (748)
++||+.+.||+..+++|+..+.+++|+++ ++++|... +....+ .++.. .+. ...|.+++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~----~~~~~----~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLE----ELLAA----LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHH----HHHHh----cCC--cccEEEeC-C
Confidence 89999999999999999999998888765 88887432 111111 11111 111 12467664 5
Q ss_pred C-ChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004512 411 L-STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (748)
Q Consensus 411 v-~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (748)
+ +.+++..+++.||+++.||..||++...+|||+||. |+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~---------------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL---------------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC---------------------CEEEcCCCCcceEE
Confidence 5 556666777779999999999999999999999964 89999998887755
No 96
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.27 E-value=7.7e-10 Score=120.95 Aligned_cols=246 Identities=14% Similarity=0.150 Sum_probs=148.4
Q ss_pred HHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHH
Q 004512 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (748)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~F 261 (748)
++++..+| |+|+.|..... ++..+..+..++|+.++.|..||. .. +.++ ...+|.|...+....+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44455555 89999875443 333444445567777665655542 10 1111 12257766665433221
Q ss_pred HHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEecccccc
Q 004512 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (748)
Q Consensus 262 l~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~ 338 (748)
+ ...++.++|+|+|.+.+... + . ++++ .++++|+.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~---~---~-----~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALD---R---E-----RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhh---h---h-----HHhcCCCCCCeEEEEECCcHhH
Confidence 0 12366778999998766431 0 0 2333 467788888888778
Q ss_pred CCHHHHH-HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004512 339 KGISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (748)
Q Consensus 339 KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~ 417 (748)
|+...++ .|++.+. .++ +.++.+++ .+ +.++++ +.+.+. + ..|+++ +.+ +++.
T Consensus 194 ~~~~~~l~~a~~~l~--~~~----~~~~~i~G----~g-~~~~l~----~~~~~~----~----~~v~~~-g~~--~~~~ 247 (350)
T cd03785 194 RAINEAVPEALAELL--RKR----LQVIHQTG----KG-DLEEVK----KAYEEL----G----VNYEVF-PFI--DDMA 247 (350)
T ss_pred HHHHHHHHHHHHHhh--ccC----eEEEEEcC----Cc-cHHHHH----HHHhcc----C----CCeEEe-ehh--hhHH
Confidence 8877654 7777664 222 33443332 22 223333 333322 1 125544 443 7999
Q ss_pred HHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC----c----cccc---CCcE
Q 004512 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SGAI 486 (748)
Q Consensus 418 aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ai 486 (748)
.+|+.||++|.+| | +.+.+|||+||. |+|++...| + ++.+ ..|+
T Consensus 248 ~~l~~ad~~v~~s---g-~~t~~Eam~~G~---------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 248 AAYAAADLVISRA---G-ASTVAELAALGL---------------------PAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHhcCEEEECC---C-HhHHHHHHHhCC---------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 9999999999876 3 578999999975 667665433 1 2334 2489
Q ss_pred EeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHH
Q 004512 487 RVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVA 528 (748)
Q Consensus 487 ~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~ 528 (748)
++++. |+++++++|..+++. ++.++...++.++++..+...
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 303 LIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHH
Confidence 99987 899999999999975 446666666777777655433
No 97
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.18 E-value=1.2e-09 Score=119.34 Aligned_cols=180 Identities=14% Similarity=0.121 Sum_probs=116.7
Q ss_pred EEeeccCCcccccccccCchhHHHHHHHHHHc-CCceEEEEeccccccCCHHHH-HHHHHHHHHhCCCCCCceEEEEEec
Q 004512 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK-FLAMGQLLEQHPDLRGKVVLVQITN 369 (748)
Q Consensus 292 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (748)
.++|+|+|...+... + . ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999997655321 0 0 1111 12 467889999998888987654 4788777542 232 333442
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCC
Q 004512 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (748)
Q Consensus 370 p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~ 449 (748)
++. . +++++.+.+.+. ..++.+. ..++..+|+.||++|.+| | +.+.+|||+||.
T Consensus 218 ----~~~-~----~~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KND-L----EKVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cch-H----HHHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 222 1 234444433221 1233332 238999999999999865 4 689999999975
Q ss_pred CccccccCCCCCCCCCCCceEEEeCCCCc-------cccc---CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHH
Q 004512 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGC-------SPSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEK 517 (748)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-------~~~l---~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~ 517 (748)
|+|++.+.|. ++.+ ..|++++|.| +++++++|.++++. ++.++.+.++
T Consensus 272 -------------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~ 331 (348)
T TIGR01133 272 -------------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEA 331 (348)
T ss_pred -------------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 7777766542 2334 2489999876 99999999999975 4466667777
Q ss_pred HHHHHHhCCHHHHHH
Q 004512 518 HYKYISSHDVAYWAK 532 (748)
Q Consensus 518 ~~~~V~~~~~~~W~~ 532 (748)
+++++.++...++++
T Consensus 332 ~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 332 ARKLAKPDAAKRIAE 346 (348)
T ss_pred HHhcCCccHHHHHHh
Confidence 888887776666554
No 98
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.17 E-value=2.4e-09 Score=118.32 Aligned_cols=252 Identities=15% Similarity=0.160 Sum_probs=146.8
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhh--hcCEEEeeC
Q 004512 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHT 254 (748)
Q Consensus 177 ~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll--~~DlIgF~t 254 (748)
..+++.+ +..+| |+|++|......+...+-.+..++|++...+-. -+.+.+. |+.+++.+-+. .+|++.-.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 3444433 44466 899999644444433343344567886542211 1111111 12223323221 267776677
Q ss_pred HHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcC-CceEEE-Ee
Q 004512 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVIL-GV 332 (748)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil-~V 332 (748)
....+++++ +|. ...+|.++++|+....+..... .....++++++ ++.+++ ..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 777666653 132 1346788899963222211100 01133455553 334444 45
Q ss_pred cccc-ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCC
Q 004512 333 DDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (748)
Q Consensus 333 dRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v 411 (748)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|.++ +.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CCC
Confidence 4643 45999999999999988888875 66555332 11 1222 222221 1 1246655 578
Q ss_pred ChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccccC-C-cEEe
Q 004512 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSLS-G-AIRV 488 (748)
Q Consensus 412 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l~-~-ai~V 488 (748)
+..++..+|+.||+++.+| |.+..|||+||. |+|.+ ..+|..+.+. + ++++
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~---------------------PvI~~~~~~~~~e~~~~g~~~lv 317 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK---------------------PVLVLRDTTERPETVEAGTNKLV 317 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC---------------------CEEECCCCCCChHHHhcCceEEe
Confidence 8999999999999999888 456799999975 66765 5555555553 3 5566
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 004512 489 NPWNVDAVADAMDSALQME 507 (748)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~ 507 (748)
|.|+++++++|.++++.+
T Consensus 318 -~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 318 -GTDKENITKAAKRLLTDP 335 (365)
T ss_pred -CCCHHHHHHHHHHHHhCh
Confidence 579999999999999865
No 99
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.16 E-value=7.7e-09 Score=115.72 Aligned_cols=270 Identities=10% Similarity=0.094 Sum_probs=156.6
Q ss_pred HHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHH
Q 004512 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (748)
Q Consensus 181 ~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~ 260 (748)
.++++..+| |+|.++ +....+..+.+++..++|+. +.++-|-....| + --.+|.+-..+....+.
T Consensus 97 ~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~w--------~---~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 97 INLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKNW--------I---TPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCccccc--------c---cCCCCEEEECCHHHHHH
Confidence 345555677 788875 22333333333344466764 334443110000 0 12478877777655544
Q ss_pred HHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCc-eEEEEecccc
Q 004512 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK-IVILGVDDMD 336 (748)
Q Consensus 261 Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~vil~VdRld 336 (748)
+.+ .|++ ..+|.++++.|+. .|.... + ..++++++ +++ .++++.||+.
T Consensus 162 l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg 213 (391)
T PRK13608 162 FID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFG 213 (391)
T ss_pred HHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcc
Confidence 432 1321 1234445555553 333211 1 12344454 234 4667899999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhH
Q 004512 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (748)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el 416 (748)
..||+..+++++ ++..|+++ ++++++. ++ ++.+++.+. .+.. ..|+++ |.+ +++
T Consensus 214 ~~k~~~~li~~~---~~~~~~~~----~vvv~G~----~~---~l~~~l~~~---~~~~------~~v~~~-G~~--~~~ 267 (391)
T PRK13608 214 VSKGFDTMITDI---LAKSANAQ----VVMICGK----SK---ELKRSLTAK---FKSN------ENVLIL-GYT--KHM 267 (391)
T ss_pred cchhHHHHHHHH---HhcCCCce----EEEEcCC----CH---HHHHHHHHH---hccC------CCeEEE-ecc--chH
Confidence 999999999885 34456554 6656532 22 222333322 2211 135544 454 579
Q ss_pred HHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc-----c-CCcEEeCC
Q 004512 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-----L-SGAIRVNP 490 (748)
Q Consensus 417 ~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-----l-~~ai~VnP 490 (748)
..+|+.||++|.. +.|++..|||+||. |+|++...+..+. + ..|.-+-+
T Consensus 268 ~~~~~~aDl~I~k----~gg~tl~EA~a~G~---------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~ 322 (391)
T PRK13608 268 NEWMASSQLMITK----PGGITISEGLARCI---------------------PMIFLNPAPGQELENALYFEEKGFGKIA 322 (391)
T ss_pred HHHHHhhhEEEeC----CchHHHHHHHHhCC---------------------CEEECCCCCCcchhHHHHHHhCCcEEEe
Confidence 9999999999863 45889999999975 6777643322221 1 22333335
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc
Q 004512 491 WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (748)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~ 545 (748)
.|.++++++|.++++++ +.++.+.++.+++...++...-++.+++.+...++-+
T Consensus 323 ~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 69999999999999865 4566667778888888888888888887777655443
No 100
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.12 E-value=7.9e-09 Score=113.65 Aligned_cols=249 Identities=15% Similarity=0.082 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecC--CCCchhHhhcCcch--HHHHHHhhhcCEEEe
Q 004512 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHS--PFPSSEIYRTLPVR--DEILKSLLNSDLIGF 252 (748)
Q Consensus 177 ~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~--PfPs~e~fr~lp~r--~~il~~ll~~DlIgF 252 (748)
..+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|- .|- +..|+. +..+ .-.+|.+-.
T Consensus 78 ~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~--~~~ad~~~~ 147 (363)
T cd03786 78 IGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAI--DKLSDLHFA 147 (363)
T ss_pred HHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHH--HHHhhhccC
Confidence 3444444444 66 89999987766665555555557888865542 110 001111 1111 123566555
Q ss_pred eCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccC-CcccccccccCchhHHHHHHHHHHc---CCceE
Q 004512 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKF---DGKIV 328 (748)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~---~~~~v 328 (748)
.+....+++.+ .| ....+|.++++++ |...+..... . ....++.+ .++.+
T Consensus 148 ~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~---~---~~~~~~~~~~~~~~~v 201 (363)
T cd03786 148 PTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA---K---KELILELLGLLPKKYI 201 (363)
T ss_pred CCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh---c---cchhhhhcccCCCCEE
Confidence 55544444332 12 1234677788774 5433321110 0 01112223 24567
Q ss_pred EEEeccccc---cCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEE
Q 004512 329 ILGVDDMDL---FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (748)
Q Consensus 329 il~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~ 405 (748)
++.++|+.. .||+..+++|++++.+. + +.++..+. ++.. +++++.+.+.+.. . ..|.
T Consensus 202 lv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~----~~l~~~~~~~~~~---~--~~v~ 261 (363)
T cd03786 202 LVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTR----PRIREAGLEFLGH---H--PNVL 261 (363)
T ss_pred EEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChH----HHHHHHHHhhccC---C--CCEE
Confidence 778999875 79999999999987542 2 33544332 2222 2344444443220 0 1355
Q ss_pred EecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CC
Q 004512 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SG 484 (748)
Q Consensus 406 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ 484 (748)
++ +....+++..+|+.||++|.+|- | +..|+++||. |+|++...+..+.+ .+
T Consensus 262 ~~-~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~---------------------PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 262 LI-SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV---------------------PVLNLRDRTERPETVES 314 (363)
T ss_pred EE-CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC---------------------CEEeeCCCCccchhhhe
Confidence 44 45678899999999999999984 4 4689999975 67777655544444 45
Q ss_pred cEEeCC-CCHHHHHHHHHHHhcCCH
Q 004512 485 AIRVNP-WNVDAVADAMDSALQMEN 508 (748)
Q Consensus 485 ai~VnP-~d~~~~A~ai~~aL~m~~ 508 (748)
|+-+.+ .|+++++++|.++++++.
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCch
Confidence 544443 379999999999998764
No 101
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.11 E-value=5.4e-08 Score=113.69 Aligned_cols=181 Identities=10% Similarity=0.119 Sum_probs=119.6
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
+..++..|.|+...||..+.+.+++++++ ++|+. .+.+|..|.....+. .-+++.+.+.+++++ -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C--
Confidence 55689999999999999999999999985 55652 366777765432221 123455666666542 0122 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEe-cCC-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVV-NCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (748)
.|+++. ..+-.--..+|+.||++++ ||. .|..|+.-+-||.- |.|-.|-.-|...
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n----------------------GgL~~sv~DG~~~ 515 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN----------------------GVLNLSILDGWWG 515 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc----------------------CCceeecccCccc
Confidence 477665 4555556678999999999 777 89999999988885 3556666666544
Q ss_pred cc---CCcEEeCC------------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHH-HHHHHHhCCHHHHHHHHH
Q 004512 481 SL---SGAIRVNP------------WNVDAVADAMDSAL-Q----MEN----QEKILRHEK-HYKYISSHDVAYWAKSID 535 (748)
Q Consensus 481 ~l---~~ai~VnP------------~d~~~~A~ai~~aL-~----m~~----~er~~r~~~-~~~~V~~~~~~~W~~~fl 535 (748)
+. .+|+.+.+ .|.+++-++|.+++ . .++ .+...++++ |..-...+++.+=++.|.
T Consensus 516 E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~ 595 (601)
T TIGR02094 516 EGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYV 595 (601)
T ss_pred ccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 43 25888885 89999999998877 2 211 122333333 222223477777777776
Q ss_pred HH
Q 004512 536 QD 537 (748)
Q Consensus 536 ~~ 537 (748)
+.
T Consensus 596 ~~ 597 (601)
T TIGR02094 596 DK 597 (601)
T ss_pred HH
Confidence 54
No 102
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.02 E-value=1.4e-09 Score=114.08 Aligned_cols=153 Identities=16% Similarity=0.235 Sum_probs=99.7
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh---hcCCCCceeeecCceEEeecCC
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW---FSGVEKLGLSAEHGYFTRWSKN 661 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~---~~~~~~l~l~aehG~~i~~~~~ 661 (748)
+.+|++|+||||++........++++.++++++.+ .++.++++|||+...+.+. ++....-.++++||+.|..++.
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 46899999999998432233456899999999885 4779999999999988887 4332122478899999987541
Q ss_pred ----CcceecccCCCcchH-HHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCCC--e
Q 004512 662 ----SAWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP--V 734 (748)
Q Consensus 662 ----~~w~~~~~~~~~~w~-~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~--v 734 (748)
..|.. .....|. +.+..++..+...++....+++.+.+++++... ++.+++..+.+.+...+ +
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 80 EVPDQHWAE---YLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CcCCHHHHH---HHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCE
Confidence 12221 1123344 334555555555667777777889999886432 12234444555444333 3
Q ss_pred EE-eeCCeEEEEecC
Q 004512 735 VV-KRGQHIVEVKPQ 748 (748)
Q Consensus 735 ~v-~~Gk~vvEvrP~ 748 (748)
.+ ..|...+||.|+
T Consensus 150 ~~~~~~~~~ldi~~~ 164 (249)
T TIGR01485 150 KLIYSSGKDLDILPQ 164 (249)
T ss_pred EEEEECCceEEEEeC
Confidence 33 568889999874
No 103
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.96 E-value=2.8e-09 Score=100.10 Aligned_cols=129 Identities=19% Similarity=0.243 Sum_probs=89.9
Q ss_pred ceEEEEeccccccCCHHHHHH-HHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 326 KIVILGVDDMDLFKGISLKFL-AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
..+|++.|++...||+..+++ |++++.+++|+++ |+++|.. ++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 467899999999999999999 9999999999765 8877752 22 12222 11 136
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCC-CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
.+. +.+ +|+.++|+.||+++.|+. .++++...+|||++|. |+|+|.. |+...+.
T Consensus 56 ~~~-g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~---------------------pvi~~~~-~~~~~~~ 110 (135)
T PF13692_consen 56 RFH-GFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK---------------------PVIASDN-GAEGIVE 110 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-----------------------EEEEHH-HCHCHS-
T ss_pred EEc-CCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC---------------------CEEECCc-chhhhee
Confidence 765 456 689999999999999985 7899999999999975 8888888 6666552
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcC
Q 004512 484 ---GAIRVNPWNVDAVADAMDSALQM 506 (748)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m 506 (748)
.++.+ +.|+++++++|.+++++
T Consensus 111 ~~~~~~~~-~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 111 EDGCGVLV-ANDPEELAEAIERLLND 135 (135)
T ss_dssp --SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred ecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence 36666 88999999999998863
No 104
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.96 E-value=1e-07 Score=105.75 Aligned_cols=150 Identities=16% Similarity=0.146 Sum_probs=96.6
Q ss_pred HHHHHcC---CceE-EEE-eccccccC-CHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 004512 318 ELKEKFD---GKIV-ILG-VDDMDLFK-GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (748)
Q Consensus 318 ~lr~~~~---~~~v-il~-VdRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 391 (748)
.++++++ ++++ ++. -+|....| ++..+++|++.+.+++|+++ +++++.+ +.. ++++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~~----~~~----~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLVN----PKR----REQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCC----hhh----HHHHHHHHhh
Confidence 3455553 4444 333 34766654 47889999999988888765 6666531 222 2334444332
Q ss_pred HhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEE
Q 004512 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (748)
Q Consensus 392 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (748)
.. |. .+.++. .++..+|+.||+++++| |.+.+|+|+||. |+|
T Consensus 243 ~~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~---------------------PvI 284 (380)
T PRK00025 243 YA---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV---------------------PMV 284 (380)
T ss_pred cC---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC---------------------CEE
Confidence 20 11 244433 47999999999999998 778889999975 666
Q ss_pred Ee-----------------CCCCcccccCC-----cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 004512 472 VS-----------------EFIGCSPSLSG-----AIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (748)
Q Consensus 472 ~S-----------------e~~G~~~~l~~-----ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (748)
++ .+.|..+.+.+ +++++..|++++++++.++|++++ .++.+.++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~ 352 (380)
T PRK00025 285 VGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEGF 352 (380)
T ss_pred EEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHHH
Confidence 65 34444555532 367788899999999999998763 444444443
No 105
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.88 E-value=1.3e-07 Score=99.50 Aligned_cols=190 Identities=12% Similarity=0.157 Sum_probs=136.9
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHhCCC--CCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD--LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
....+|+++.+.|.|+.. .|+-+...+++.|. .-.++.|+++| ..|+. +-++..+.+++++.+++..-
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRne--eD~ervk~Lkd~a~~L~i~~------ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNE--EDEERVKSLKDLAEELKIPK------ 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCCh--hhHHHHHHHHHHHHhcCCcc------
Confidence 457899999999999999 77777778888887 33457788766 45543 33455678888888877541
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (748)
.|.| .-.+|.+++..+|.-|-+.|-+-..|-||+...||||+|.-. +.-.+| .+-.=|+.+..|-
T Consensus 338 ~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIp--i~h~Sg--------GP~lDIV~~~~G~---- 402 (465)
T KOG1387|consen 338 HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIP--IVHNSG--------GPLLDIVTPWDGE---- 402 (465)
T ss_pred ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceE--EEeCCC--------CCceeeeeccCCc----
Confidence 3554 458999999999999999999999999999999999996410 000000 0111133333331
Q ss_pred CCcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 004512 483 SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (748)
Q Consensus 483 ~~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 541 (748)
..|++. | +.++-|++|.+++.+..+||..+.+..|..+.++.-+...+.|.+.+...
T Consensus 403 ~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 403 TTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred cceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 136666 3 67788999999999999998887777888888877777666666555443
No 106
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.88 E-value=1.8e-07 Score=102.40 Aligned_cols=239 Identities=13% Similarity=0.061 Sum_probs=138.3
Q ss_pred HHHHhCCCCCEEEEeCcchhh--HHH-HHHh-hccCCeEEEEecCCCCchhHhhcCc-chHHHHHHhhhcCEEEeeCHHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMV--LPS-FLRK-RFHRVKVGFFLHSPFPSSEIYRTLP-VRDEILKSLLNSDLIGFHTFDY 257 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~ig~flH~PfPs~e~fr~lp-~r~~il~~ll~~DlIgF~t~~~ 257 (748)
++..+++ +|+|++|..-+.. ++. ++++ +..++|+++++|--+|-. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4444566 4999998754321 222 2222 112699999999877632 11111 1222334455789999998876
Q ss_pred HHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccc
Q 004512 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (748)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~ 337 (748)
.+.+.+ .|+. ..++.++++..+...... +....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccccc--------------cccccCCceEEEecChhh
Confidence 665542 1221 112333343322211100 011234568999999994
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHH
Q 004512 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (748)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~ 417 (748)
..++. +..|+++ |+++|. |++.. . . ...|+|. |.++.+|+.
T Consensus 181 ~~~l~----------~~~~~~~----l~i~G~-----g~~~~-----------~-----~---~~~V~f~-G~~~~eel~ 221 (333)
T PRK09814 181 SPFLK----------NWSQGIK----LTVFGP-----NPEDL-----------E-----N---SANISYK-GWFDPEELP 221 (333)
T ss_pred chHHH----------hcCCCCe----EEEECC-----Ccccc-----------c-----c---CCCeEEe-cCCCHHHHH
Confidence 33211 1245544 777773 22211 0 0 0136654 689999999
Q ss_pred HHHHhCcEEEecCC-----------CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC---
Q 004512 418 PYYAIAECCVVNCV-----------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--- 483 (748)
Q Consensus 418 aly~~ADv~vvtS~-----------~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 483 (748)
.+|+. |+++++.- .-.++--..||||||. |+|++..++.++.+.
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~---------------------PVI~~~~~~~~~~V~~~~ 279 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL---------------------PVIVWSKAAIADFIVENG 279 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC---------------------CEEECCCccHHHHHHhCC
Confidence 99998 76665431 1223344788999975 899999999888883
Q ss_pred CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 004512 484 GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (748)
Q Consensus 484 ~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 524 (748)
.|+.|+ +.++++++|.+. ++++++++.++.++....
T Consensus 280 ~G~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 280 LGFVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred ceEEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 489998 688999998873 455666655565555543
No 107
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.85 E-value=3.1e-06 Score=96.47 Aligned_cols=301 Identities=19% Similarity=0.259 Sum_probs=146.3
Q ss_pred EEEEeCcchhhHHHHHHhhccCCeEEEEecCCCC-------chhHhhcCcc---hHH-----------HHHH-hhhcCEE
Q 004512 193 YVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP-------SSEIYRTLPV---RDE-----------ILKS-LLNSDLI 250 (748)
Q Consensus 193 iVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP-------s~e~fr~lp~---r~~-----------il~~-ll~~DlI 250 (748)
+.+.|.|..-+-.-++|++.|++.-+|+.|-.-+ +.++|..|+. .++ |-++ -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 5566888766666689999999999999996543 1233444441 111 1111 1233332
Q ss_pred EeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccC----chhHHHHHHH-HHHc--
Q 004512 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVKEL-KEKF-- 323 (748)
Q Consensus 251 gF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~----~~~~~~~~~l-r~~~-- 323 (748)
-.-+.--++ -|..+| +|..- .|.|||++.+.|...-.- ....+++.++ +..|
T Consensus 226 TTVSeITa~----Ea~~LL----------------~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g 284 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLL----------------KRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYG 284 (633)
T ss_dssp EESSHHHHH----HHHHHH----------------SS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eehhhhHHH----HHHHHh----------------CCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222111100 111222 22221 357999999887654210 1122333333 3333
Q ss_pred -----CCceEEE-Eecccc-ccCCHHHHHHHHHHHHH---hCCCCCCceEEEEEecCCCCCchh---------HHHHHHH
Q 004512 324 -----DGKIVIL-GVDDMD-LFKGISLKFLAMGQLLE---QHPDLRGKVVLVQITNPARSSGKD---------VQDLLSD 384 (748)
Q Consensus 324 -----~~~~vil-~VdRld-~~KGi~~~l~A~~~ll~---~~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~e 384 (748)
.++.+++ ..||.+ ..||++..|+|+.+|-. ..- . ++.|+..|-.|+....-. +.++++.
T Consensus 285 ~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~-~-~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t 362 (633)
T PF05693_consen 285 HYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAG-S-DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDT 362 (633)
T ss_dssp ---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHH
T ss_pred cCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcC-C-CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHH
Confidence 1355544 489999 57999999999998743 221 1 233333344565443211 1223333
Q ss_pred HHHHHHHHhccc------CC---------------------------------------------------------CCC
Q 004512 385 TNRIAEEINLNF------GK---------------------------------------------------------PGY 401 (748)
Q Consensus 385 i~~lv~~IN~~~------g~---------------------------------------------------------~~~ 401 (748)
+.++.++|..+- |. .+-
T Consensus 363 ~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~dr 442 (633)
T PF05693_consen 363 VDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDR 442 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-S
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCc
Confidence 333333332110 10 112
Q ss_pred ccEEEecCCCC------hhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCC
Q 004512 402 EPIVIIKEPLS------TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (748)
Q Consensus 402 ~pV~~~~~~v~------~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 475 (748)
..|+|....++ .-++..+.+.+|.+|+||++|+.|.+|+|++|.+. |-|.|..
T Consensus 443 VKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gV---------------------PsITTnL 501 (633)
T PF05693_consen 443 VKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGV---------------------PSITTNL 501 (633)
T ss_dssp EEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT-----------------------EEEETT
T ss_pred eEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCC---------------------ceeeccc
Confidence 24565544333 34788999999999999999999999999999965 7899999
Q ss_pred CCccccc--------CCcEE-eCC--CC----HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004512 476 IGCSPSL--------SGAIR-VNP--WN----VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (748)
Q Consensus 476 ~G~~~~l--------~~ai~-VnP--~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 537 (748)
+|...-+ ..|+. |+- .| ++++|+.|.+...++..+|.....+..+.-..-+|.+-..-|.+.
T Consensus 502 sGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 502 SGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp BHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred hhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9865332 13554 433 22 356677777888888877665544443333334665554444443
No 108
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.84 E-value=6e-07 Score=103.62 Aligned_cols=253 Identities=14% Similarity=0.087 Sum_probs=161.0
Q ss_pred CCCEEE--EeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcc--hHHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 190 DEDYVW--IHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV--RDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 190 ~~DiVw--vhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~--r~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
++|++. ++.-|... +....|.-++.+..|+ =+ . |. -+..+..+-.+|.|..-|.+-.+.....
T Consensus 224 ~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~- 290 (519)
T TIGR03713 224 DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYESLSRADLIIVDREDIERLLEEN- 290 (519)
T ss_pred CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhChhhcCeEEEcCHHHHHHHHHH-
Confidence 357777 56667665 3333444445556665 11 1 21 2455666677787776665434333211
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHH
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l 345 (748)
+ +- .. ...+|..+|++.- +.... ..++..++.|.+++||+ +.|-+...|
T Consensus 291 --~-~~------------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~~~~~I~v~idrL-~ek~~~~~I 339 (519)
T TIGR03713 291 --Y-RE------------NY-VEFDISRITPFDT--RLRLG------------QSQQLYETEIGFWIDGL-SDEELQQIL 339 (519)
T ss_pred --h-hh------------cc-cCCcceeeCccce--EEecC------------hhhcccceEEEEEcCCC-ChHHHHHHH
Confidence 1 10 00 1224445676543 11110 11233567777888899 999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC-C--------------------c-c
Q 004512 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG-Y--------------------E-P 403 (748)
Q Consensus 346 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~-~--------------------~-p 403 (748)
+|+.++++++|+.. |.+.|.. +. .++.+.++++++++|..++... + + .
T Consensus 340 ~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (519)
T TIGR03713 340 QQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKE 409 (519)
T ss_pred HHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhccccc
Confidence 99999999999987 7766632 11 2345667777777776643210 0 0 1
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
.+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+|||+.|. |.| .-|.++.+.
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi---------------------PqI---nyg~~~~V~ 464 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI---------------------PQI---NKVETDYVE 464 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC---------------------Cee---ecCCceeeE
Confidence 344566667779999999999999999999999 9999999864 555 567777773
Q ss_pred ---CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 004512 484 ---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (748)
Q Consensus 484 ---~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 524 (748)
+|.+| .|.+++++||...|+.+. .........++.+.+
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDD 505 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHH
Confidence 69999 699999999999999764 233333334444433
No 109
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.73 E-value=2.4e-07 Score=97.89 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=61.3
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
..++|++|+||||+.... ..++.+.++|+++.+ .+..|+|+|||+...+.+.+..+. ...++++||+++...
T Consensus 2 ~~kli~~DlDGTLl~~~~---~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 74 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNK---TISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNG 74 (264)
T ss_pred CeeEEEEcCCCCccCCCC---ccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecC
Confidence 358999999999998653 378999999999875 489999999999999999987663 226999999999987
No 110
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.70 E-value=1.2e-07 Score=98.47 Aligned_cols=146 Identities=16% Similarity=0.222 Sum_probs=88.3
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC---CceeeecCceEEeecCC--
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KLGLSAEHGYFTRWSKN-- 661 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~---~l~l~aehG~~i~~~~~-- 661 (748)
+|++|+||||.+.. ...++ ..++|+ + .+.+..++|+|||+...+.+.+..++ ...++++||+.+.....
T Consensus 1 li~~DlDgTLl~~~---~~~~~-~~~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLGDD---EGLAS-FVELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccCCH---HHHHH-HHHHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 58999999999732 22333 336666 4 45688999999999999999987652 12389999999876431
Q ss_pred --CcceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCc--EEEEEcccCCcCchHHHHHHHHHHHHhhhcCCCeEE-
Q 004512 662 --SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKET--AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV- 736 (748)
Q Consensus 662 --~~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~--sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~v~v- 736 (748)
..|.. .....|.. .+ +..+....+|..+|.+.. .+.+||+.. |+.. ....++...+... ...+.+
T Consensus 75 ~~~~~~~---~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQK---HIDHDWRR--QA-VVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHH---HHhcCCCH--HH-HHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEEEE
Confidence 11211 01112221 12 233445678888888763 577888865 4321 1223444444432 123333
Q ss_pred eeCCeEEEEecC
Q 004512 737 KRGQHIVEVKPQ 748 (748)
Q Consensus 737 ~~Gk~vvEvrP~ 748 (748)
..+...+|+.|+
T Consensus 145 ~~~~~~~ei~~~ 156 (236)
T TIGR02471 145 LSCGWFLDVLPL 156 (236)
T ss_pred EECCceEEEeeC
Confidence 456677999874
No 111
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.68 E-value=2.6e-06 Score=101.68 Aligned_cols=181 Identities=9% Similarity=0.055 Sum_probs=116.1
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHH--hCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 327 IVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
.+|.++.|+...||..+++..+++|++ .+|+ ..+++|..|.....+ ..-+++.+.+.++++. -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d-~~gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPAD-EPGKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccc-hHHHHHHHHHHHHHhC--cCCC--C--cE
Confidence 378889999999999999999999865 3454 247787776433222 1123455555555431 0221 1 47
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCC--CccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (748)
+|+. ..+-.--..++..|||++.||. .|.-|+.-+-||.. |.|-+|-.-|.-.+.
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N----------------------G~LnlSvlDGww~E~ 606 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN----------------------GGLNLSVLDGWWDEG 606 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc----------------------CCeeeecccCccccc
Confidence 7775 4555566679999999999999 78888887777774 467788777755444
Q ss_pred -C--CcEEeCC------------CCHHHHHHHHHHHhc----CC-----HHHHHHHHHHH-HHHHHhCCHHHHHHHHHHH
Q 004512 483 -S--GAIRVNP------------WNVDAVADAMDSALQ----ME-----NQEKILRHEKH-YKYISSHDVAYWAKSIDQD 537 (748)
Q Consensus 483 -~--~ai~VnP------------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~~-~~~V~~~~~~~W~~~fl~~ 537 (748)
. +|..+.+ .|.+++-+.|.+.+- .. +.+...++++. ....-.+++.+=++.|++.
T Consensus 607 ~~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 607 YDGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred cCCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 2 5888887 455566666654443 10 12333333332 2223357888888888777
Q ss_pred HH
Q 004512 538 LE 539 (748)
Q Consensus 538 l~ 539 (748)
+-
T Consensus 687 ~Y 688 (778)
T cd04299 687 FY 688 (778)
T ss_pred hH
Confidence 65
No 112
>PTZ00174 phosphomannomutase; Provisional
Probab=98.65 E-value=8.6e-07 Score=92.95 Aligned_cols=72 Identities=18% Similarity=0.203 Sum_probs=58.7
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC--CC-ceeeecCceEEeec
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTRWS 659 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~--~~-l~l~aehG~~i~~~ 659 (748)
+.++|++|+||||.... ...++.++++|++|.+ .+..|+|+|||+...+.+.++.. .. -.+++.||+.+...
T Consensus 4 ~~klia~DlDGTLL~~~---~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPR---NPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCeEEEEECcCCCcCCC---CCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 46899999999999743 3467889999999886 48999999999999998888632 12 25689999999864
No 113
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.60 E-value=8e-07 Score=91.66 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=57.4
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
-++||+|+||||+... ...++++.++|++|.+ .+..|+|+|||+...+...+..++ +..++++||+.+...
T Consensus 3 ~kli~~DlDGTLl~~~---~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKD---RRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCC---CccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEc
Confidence 3799999999999743 3467889999999985 589999999999998877654442 245899999998765
No 114
>PLN02423 phosphomannomutase
Probab=98.58 E-value=1.2e-06 Score=91.80 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=57.1
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC-C-C-ceeeecCceEEeec
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E-K-LGLSAEHGYFTRWS 659 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~-~-l~l~aehG~~i~~~ 659 (748)
.++++|+|+||||+... ...++++.++|++|.+ . ..++++|||+...+.+.|+.. . . ..++++||+.+...
T Consensus 6 ~~~i~~~D~DGTLl~~~---~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 6 PGVIALFDVDGTLTAPR---KEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKD 79 (245)
T ss_pred cceEEEEeccCCCcCCC---CcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeC
Confidence 35577799999999743 3457889999999995 3 999999999999998888763 1 1 36889999999854
No 115
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.48 E-value=1.8e-06 Score=90.91 Aligned_cols=71 Identities=14% Similarity=0.082 Sum_probs=56.2
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecCC
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~~ 661 (748)
+|++|+||||+.... ..+ +..+++|++|.+. +..|+++|||+...+..++..++ ..++|++||+.+...++
T Consensus 1 li~~DlDGTll~~~~--~~~-~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG--YDW-GPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCC--cCc-hHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCC
Confidence 589999999997542 123 3588999998864 89999999999999888877653 24799999999987543
No 116
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.46 E-value=3.1e-05 Score=86.66 Aligned_cols=134 Identities=17% Similarity=0.116 Sum_probs=84.3
Q ss_pred CceEEE--Eeccccc-cCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCC
Q 004512 325 GKIVIL--GVDDMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (748)
Q Consensus 325 ~~~vil--~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~ 401 (748)
++++|+ +.+|..+ .|+++.+++|++.+.+++|+++ +++.+.+ +... ..++++.... +. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~~----~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAEY----GP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHHh----CC-CC
Confidence 555553 4469887 7999999999999999899876 5443322 1111 2223333332 21 11
Q ss_pred ccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe--------
Q 004512 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-------- 473 (748)
Q Consensus 402 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-------- 473 (748)
.|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~---------------------P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT---------------------PMVVGYRMKPLTF 300 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC---------------------CEEEEEcCCHHHH
Confidence 3554433 4567999999999999 667779999986 33333
Q ss_pred ---------CCCCcccccCC-c----EEeCCCCHHHHHHHHHHHhcCC
Q 004512 474 ---------EFIGCSPSLSG-A----IRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 474 ---------e~~G~~~~l~~-a----i~VnP~d~~~~A~ai~~aL~m~ 507 (748)
.+.+....+.+ + ++-+-.+++.+++++.+.|+++
T Consensus 301 ~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 301 LIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333321 1 2224457899999999999887
No 117
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.45 E-value=9.8e-07 Score=92.80 Aligned_cols=70 Identities=21% Similarity=0.281 Sum_probs=58.5
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecC
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~ 660 (748)
+|++|+||||... ....+++.+++|++|.+. +..++|+|||+...+...+..++ ..++|+.||+.+...+
T Consensus 1 li~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLND---DHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCC---CCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCC
Confidence 5899999999974 335788999999999875 89999999999999888876653 2478999999998653
No 118
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.43 E-value=1.5e-06 Score=89.25 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=56.2
Q ss_pred EEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecC
Q 004512 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 588 i~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~ 660 (748)
|++|+||||+... ...+++..++|++|.+ .+..++++|||+...+...+..++ ...++++||+.+...+
T Consensus 1 i~~DlDGTLl~~~---~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTDPN---RAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCCCC---cccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 6899999999743 3467889999999885 589999999999998777765543 4568999999998764
No 119
>PLN02382 probable sucrose-phosphatase
Probab=98.43 E-value=1.2e-06 Score=98.63 Aligned_cols=156 Identities=14% Similarity=0.180 Sum_probs=91.7
Q ss_pred hhccCceEEEecCCCCCCCCCCCCCCCC-HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh---hcCC-CCceeeecCce
Q 004512 580 YNKTNSRLILLDYDGTVMPQTSEDKRPS-TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW---FSGV-EKLGLSAEHGY 654 (748)
Q Consensus 580 y~~s~~rli~lDyDGTL~p~~~~~~~p~-~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~---~~~~-~~l~l~aehG~ 654 (748)
+..+.+.+|++|+||||++... ....+ .+...+++++.+ .+..++++|||+.....+. |... |. .+++.||+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~-~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt 80 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD-PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGT 80 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC-ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCc
Confidence 3466789999999999997531 11344 344444477664 5789999999996655444 4332 44 36677999
Q ss_pred EEeecCC----CcceecccCCCcchHH-HHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhh
Q 004512 655 FTRWSKN----SAWEICSLTRDFDWKE-IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (748)
Q Consensus 655 ~i~~~~~----~~w~~~~~~~~~~w~~-~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~ 729 (748)
+|.+.+. ..|... .+..|.. .+.+.+..+....+....|++.+.+.+++...+ +.++...+.+.+
T Consensus 81 ~I~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~-------~~~~~~~l~~~~ 150 (413)
T PLN02382 81 EIAYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKK-------AQEVIKELSERL 150 (413)
T ss_pred EEEeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHH-------hHHHHHHHHHHH
Confidence 9987531 223321 2233432 233333333223345666778888988876421 223444444444
Q ss_pred cCC--CeEE-eeCCeEEEEecC
Q 004512 730 ANE--PVVV-KRGQHIVEVKPQ 748 (748)
Q Consensus 730 ~~~--~v~v-~~Gk~vvEvrP~ 748 (748)
... .+.+ ..|...+||-|+
T Consensus 151 ~~~g~~~~i~~s~~~~ldI~p~ 172 (413)
T PLN02382 151 EKRGLDVKIIYSGGIDLDVLPQ 172 (413)
T ss_pred HhcCCcEEEEEECCcEEEEEeC
Confidence 332 3443 478889999874
No 120
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.41 E-value=1.2e-06 Score=92.02 Aligned_cols=150 Identities=17% Similarity=0.239 Sum_probs=87.5
Q ss_pred CceEEEecCCCCCC-CCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC----CCCceeeecCceEEee
Q 004512 584 NSRLILLDYDGTVM-PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG----VEKLGLSAEHGYFTRW 658 (748)
Q Consensus 584 ~~rli~lDyDGTL~-p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~----~~~l~l~aehG~~i~~ 658 (748)
++++|++|+||||+ ... ....++.+.|+ ....++..++++|||+.+...+.+.. .| -.+|+++|++|.+
T Consensus 1 ~~~ll~sDlD~Tl~~~~~----~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P-d~~I~svGt~I~~ 74 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD----EALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQP-DYIITSVGTEIYY 74 (247)
T ss_dssp -SEEEEEETBTTTBHCHH----HHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE--SEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCcCCCH----HHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCC-CEEEecCCeEEEE
Confidence 36899999999999 211 01133444444 23367889999999999988877653 24 4589999999998
Q ss_pred cCCCcceecc---cCCCcchH-HHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCCC-
Q 004512 659 SKNSAWEICS---LTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP- 733 (748)
Q Consensus 659 ~~~~~w~~~~---~~~~~~w~-~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~~- 733 (748)
.. .|.... ...+..|. +.+++++..+..-.+....+..++.+++.++..++. ..+..|+..+...+
T Consensus 75 ~~--~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~-------~~~~~i~~~l~~~~l 145 (247)
T PF05116_consen 75 GE--NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA-------DILEEIRARLRQRGL 145 (247)
T ss_dssp SS--TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC-------HHHHHHHHHHHCCTC
T ss_pred cC--CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch-------hHHHHHHHHHHHcCC
Confidence 42 333210 01223444 456666665544444444566778899888866443 22333444444444
Q ss_pred -eEEe-eCCeEEEEecC
Q 004512 734 -VVVK-RGQHIVEVKPQ 748 (748)
Q Consensus 734 -v~v~-~Gk~vvEvrP~ 748 (748)
+.++ .+...+.|-|+
T Consensus 146 ~~~~i~s~~~~ldilP~ 162 (247)
T PF05116_consen 146 RVNVIYSNGRDLDILPK 162 (247)
T ss_dssp EEEEEECTCCEEEEEET
T ss_pred CeeEEEccceeEEEccC
Confidence 4444 45667787774
No 121
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.40 E-value=2.1e-06 Score=88.09 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=55.2
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-C-ceeeecCceEEeec
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K-LGLSAEHGYFTRWS 659 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~-l~l~aehG~~i~~~ 659 (748)
+|++|+||||+... ....+..+++|++|.+ .+..|+++|||+...+...+..+. . ..+||+||+.+...
T Consensus 1 ~i~~DlDGTLL~~~---~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDSH---SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCCC---CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 58999999999743 2234448999999875 589999999999999888887653 2 46999999999764
No 122
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.40 E-value=5.7e-07 Score=92.09 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=59.1
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecC
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~ 660 (748)
++|++|+||||+.. ....+++..++|++|.+ ++..|+++|||+...+...+..++ +..++++||+.+...+
T Consensus 2 k~v~~DlDGTLl~~---~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEP---NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCC---CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 58999999999973 34578899999999986 589999999999998888766553 2368999999998764
No 123
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.40 E-value=1.9e-06 Score=91.49 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=58.2
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
++|++|+||||... ....+++.+++|++|.+ .+..|+++|||+...+...+..+. +..+++.||+.+...
T Consensus 3 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~ 73 (272)
T PRK15126 3 RLAAFDMDGTLLMP---DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSL 73 (272)
T ss_pred cEEEEeCCCcCcCC---CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcC
Confidence 69999999999974 23578999999999986 489999999999999888876542 235799999999853
No 124
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.40 E-value=0.0002 Score=78.79 Aligned_cols=301 Identities=16% Similarity=0.222 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcc----hhhHHH--HHHhhccCCeEEEEecCCC---------CchhHhhcCcch
Q 004512 173 LSANKVFADKVMEVINPDEDYVWIHDYH----LMVLPS--FLRKRFHRVKVGFFLHSPF---------PSSEIYRTLPVR 237 (748)
Q Consensus 173 ~~vN~~fA~~i~~~~~~~~DiVwvhDyh----l~llp~--~lr~~~~~~~ig~flH~Pf---------Ps~e~fr~lp~r 237 (748)
.+.+++|+- ......|++..||+|--. ...+|- -||+++|+.++..+--+|- +..-.-..+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 345666651 122334566899999765 334444 4899999999998876663 222122335643
Q ss_pred H-HHHHHh---hhcCEEEeeCHHHHHHHHHHHHHHhCccccccCce-------------------------eE-------
Q 004512 238 D-EILKSL---LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGY-------------------------IG------- 281 (748)
Q Consensus 238 ~-~il~~l---l~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~-------------------------~~------- 281 (748)
. -..+.. ...|+..|...+.=-|++..|.+. |+..---++. +.
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHH
Confidence 2 233333 345777776666666776666432 1110000000 00
Q ss_pred ---EEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCC-ceEEEEeccccccCCHHHHHHHHHHHHHhCCC
Q 004512 282 ---LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357 (748)
Q Consensus 282 ---i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~ 357 (748)
...+.+. |.+.. +..... ...|........+|.+.++ +++++..+. ...--...+.|+..+++++|+
T Consensus 190 ~Rf~~LGa~~--v~v~G---NlKfd~--~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~ 260 (419)
T COG1519 190 QRFRSLGAKP--VVVTG---NLKFDI--EPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPN 260 (419)
T ss_pred HHHHhcCCcc--eEEec---ceeecC--CCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCC
Confidence 0111111 11111 111111 1123445566778888877 889888887 233334477899999999998
Q ss_pred CCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CCccEEEecCCCChhhHHHHHHhCcEEEec-
Q 004512 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-------GYEPIVIIKEPLSTQDKVPYYAIAECCVVN- 429 (748)
Q Consensus 358 ~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~-------~~~pV~~~~~~v~~~el~aly~~ADv~vvt- 429 (748)
.. ||. + | +-++ =-..+++++++.|-+++.- ..++|.+.. +.-|+..||++|||+.|-
T Consensus 261 ~l----lIl-V-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVGG 325 (419)
T COG1519 261 LL----LIL-V-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVGG 325 (419)
T ss_pred ce----EEE-e-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEECC
Confidence 64 433 2 4 2333 2357888888887666431 122454332 467999999999998774
Q ss_pred CCC--ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe----CCCCccccc---CCcEEeCCCCHHHHHHHH
Q 004512 430 CVR--DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCSPSL---SGAIRVNPWNVDAVADAM 500 (748)
Q Consensus 430 S~~--EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~VnP~d~~~~A~ai 500 (748)
|+- -|-| ++|..+++. |+|.- .|.-+.+.+ ++++.|+. .+.+++++
T Consensus 326 Slv~~GGHN--~LEpa~~~~---------------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v 380 (419)
T COG1519 326 SLVPIGGHN--PLEPAAFGT---------------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAV 380 (419)
T ss_pred cccCCCCCC--hhhHHHcCC---------------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHH
Confidence 333 3444 679999964 45543 344444444 24677774 78888888
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHhC
Q 004512 501 DSALQMENQEKILRHEKHYKYISSH 525 (748)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~V~~~ 525 (748)
...++. +++|.++.+++...|.++
T Consensus 381 ~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 381 ELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 888876 668888888888888776
No 125
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.39 E-value=2e-06 Score=91.01 Aligned_cols=71 Identities=24% Similarity=0.301 Sum_probs=58.0
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
.++|++|+||||.... ...+++.+++|++|.+ .+..|+|+|||+...+...+..++ ...+++.||+.+...
T Consensus 3 ~kli~~DlDGTLl~~~---~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPK---KTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCC---CccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEec
Confidence 4799999999999743 3467889999999886 489999999999998887776553 235899999999853
No 126
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.38 E-value=2e-06 Score=88.77 Aligned_cols=68 Identities=21% Similarity=0.287 Sum_probs=57.6
Q ss_pred EEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 588 i~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
||+|+||||++.. ..++++.+++|++|.+. +..++++|||+...+.+++..++ ..++|++||+.+...
T Consensus 1 i~~DlDGTLl~~~---~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~ 69 (254)
T PF08282_consen 1 IFSDLDGTLLNSD---GKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDP 69 (254)
T ss_dssp EEEECCTTTCSTT---SSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEET
T ss_pred cEEEECCceecCC---CeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccceeeec
Confidence 7999999999843 33789999999999974 89999999999999999988653 258999999999443
No 127
>PRK10976 putative hydrolase; Provisional
Probab=98.36 E-value=1.4e-06 Score=91.99 Aligned_cols=70 Identities=19% Similarity=0.191 Sum_probs=58.2
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
++|++|+||||.... ...+++.+++|++|.+ .+..|+|+|||+...+...+..++ ...+++.||+.+...
T Consensus 3 kli~~DlDGTLl~~~---~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~ 73 (266)
T PRK10976 3 QVVASDLDGTLLSPD---HTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDT 73 (266)
T ss_pred eEEEEeCCCCCcCCC---CcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECC
Confidence 799999999999743 3468889999999885 589999999999999888776553 245799999999754
No 128
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.33 E-value=4.1e-06 Score=88.72 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=58.0
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC----CceeeecCceEEee
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRW 658 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~----~l~l~aehG~~i~~ 658 (748)
-++|++|+||||.... ...+++.+++|++|.+ .+..|+|+|||+...+...+..+. ...+++.||+.+..
T Consensus 3 ~kli~~DlDGTLl~~~---~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD---HTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred eEEEEEecCCcCcCCC---CccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4799999999999743 3578899999999986 489999999999998887776542 13589999999985
No 129
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.26 E-value=1.9e-06 Score=91.51 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=59.6
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC--CceeeecCceEEeecC
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~--~l~l~aehG~~i~~~~ 660 (748)
..++||+|+||||+.. ....++..+++|++|.+ .+..|+++|||+...+...+..+. +..+|++||+.+..++
T Consensus 6 ~~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 4789999999999973 23467889999999885 489999999999999888876552 2458999999998653
No 130
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.26 E-value=1.7e-05 Score=92.40 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=59.4
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecCC
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~~ 661 (748)
++++||+|+||||+.... ..++..+++|++|.+. +..|+++|||+...+...+..+. ...++++||+.+..+++
T Consensus 415 ~~KLIfsDLDGTLLd~d~---~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPLT---YSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred eeeEEEEECcCCCcCCCC---ccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 578999999999997432 2345789999999864 89999999999998887776543 24699999999987643
No 131
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.24 E-value=4.4e-06 Score=73.44 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=71.4
Q ss_pred EEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-C--cEEeCCCCHHHHHHHHH
Q 004512 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMD 501 (748)
Q Consensus 425 v~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~VnP~d~~~~A~ai~ 501 (748)
|++.|+..+|+++..+|+||||. |+|.+...++.+.+. + ++.++ |+++++++|.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~---------------------~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~ 57 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGT---------------------PVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE 57 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCC---------------------eEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH
Confidence 46778888999999999999963 677776777777773 3 67778 9999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Q 004512 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAKSID 535 (748)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~fl 535 (748)
.+++.| ++++...++++++|. .|++.+=++.++
T Consensus 58 ~ll~~~-~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 58 YLLENP-EERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHCCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999965 588888888999998 678877777665
No 132
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.17 E-value=8.7e-06 Score=86.02 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=58.2
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecC
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~ 660 (748)
.++||+|+||||..... ...+.+.++|++|.+. ++.|+++|||+...+...+..+. ...+|++||+.|..+.
T Consensus 1 ~KLIftDLDGTLLd~~~---~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~ 73 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEF---NSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPE 73 (302)
T ss_pred CcEEEEeCCCCCcCCCC---cCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcc
Confidence 37999999999998542 2356789999999964 89999999999998887776542 2369999999998763
No 133
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.09 E-value=1.4e-05 Score=84.93 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=57.4
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeec
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS 659 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~ 659 (748)
.++||+|+||||+... ...++++.++|++|.+ .+..++|+|||+...+...+..+. .-.++++||+.+..+
T Consensus 4 ~kli~~DlDGTLl~~~---~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~ 75 (273)
T PRK00192 4 KLLVFTDLDGTLLDHH---TYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIP 75 (273)
T ss_pred ceEEEEcCcccCcCCC---CcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEec
Confidence 4799999999999732 2345779999999885 488999999999998888776653 236899999999864
No 134
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.04 E-value=7.4e-05 Score=84.59 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=97.8
Q ss_pred cCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 323 FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 323 ~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
+.++.++++ + ...|+|++.+.++.|++. |=+ |..+ . ...++.++ .+ | .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----C
Confidence 345556655 1 899999999999999987 654 5332 1 11344444 22 2 2
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe-CCCCcccc
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPS 481 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~ 481 (748)
.|+.+.+ +...++..+|..||+++.+|..||++++..||+..|. |++.= ...|..+.
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~---------------------pI~afd~t~~~~~~ 386 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL---------------------LILGFEETAHNRDF 386 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC---------------------cEEEEecccCCccc
Confidence 4666654 4556799999999999999999999999999999753 44443 33455555
Q ss_pred cCCcEEeCCCCHHHHHHHHHHHhcCCH
Q 004512 482 LSGAIRVNPWNVDAVADAMDSALQMEN 508 (748)
Q Consensus 482 l~~ai~VnP~d~~~~A~ai~~aL~m~~ 508 (748)
+..|.++++.|+++++++|.++|+.+.
T Consensus 387 i~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 387 IASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred ccCCceecCCCHHHHHHHHHHHhcCHH
Confidence 666899999999999999999999875
No 135
>PLN02887 hydrolase family protein
Probab=98.01 E-value=3.8e-05 Score=89.47 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=59.7
Q ss_pred HHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC---Cc------
Q 004512 576 IASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KL------ 646 (748)
Q Consensus 576 i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~---~l------ 646 (748)
....|+. +-++|++|+||||... ....++..+++|++|.+ .+..|+|+|||+...+...+..+. ..
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~---d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS---KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC---CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 3344443 5679999999999974 34578999999999986 489999999999998887776442 11
Q ss_pred -eeeecCceEEeec
Q 004512 647 -GLSAEHGYFTRWS 659 (748)
Q Consensus 647 -~l~aehG~~i~~~ 659 (748)
..|+.||+.+...
T Consensus 375 ~p~I~~NGA~I~d~ 388 (580)
T PLN02887 375 SPGVFLQGLLVYGR 388 (580)
T ss_pred ccEEeecCeEEEEC
Confidence 2456699999753
No 136
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.98 E-value=1.5e-05 Score=82.54 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=55.3
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC-CceeeecCceEEeecC
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~-~l~l~aehG~~i~~~~ 660 (748)
+||+|+||||.... . ..++..++|++|.+. +..++++|||+...+...+..+. ...++++||+.+..+.
T Consensus 1 li~~DlDGTLl~~~---~-~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---Y-EPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCCC---C-CchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecC
Confidence 58999999999832 1 345689999999965 89999999999998888775542 2368999999998753
No 137
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.69 E-value=6.8e-05 Score=73.15 Aligned_cols=70 Identities=13% Similarity=0.204 Sum_probs=52.8
Q ss_pred EEEecCCCCCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHh---hhhcC-------CCCcee
Q 004512 587 LILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG---NWFSG-------VEKLGL 648 (748)
Q Consensus 587 li~lDyDGTL~p~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~---~~~~~-------~~~l~l 648 (748)
++++|+||||+..... ....++.+.+++++|.+. ++.|+++|||+..... +|+.. +|.-.+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 5899999999975410 135689999999999865 8999999999987653 66644 344467
Q ss_pred eecCceEEe
Q 004512 649 SAEHGYFTR 657 (748)
Q Consensus 649 ~aehG~~i~ 657 (748)
++.+|..+.
T Consensus 80 i~~~g~~~~ 88 (157)
T smart00775 80 LLSPDRLFA 88 (157)
T ss_pred EEcCCcchh
Confidence 788887764
No 138
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.51 E-value=0.00012 Score=67.49 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=53.3
Q ss_pred EEEecCCCCCCCCCCC-----CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCCC----CceeeecCceEEe
Q 004512 587 LILLDYDGTVMPQTSE-----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTR 657 (748)
Q Consensus 587 li~lDyDGTL~p~~~~-----~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~----~l~l~aehG~~i~ 657 (748)
+++||+||||++..+. ...+.+++.+.|++|.+. +..++|+||+....++.++..+. .-.++++++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 5899999999997642 346788999999999975 78999999999999999886531 1234555555443
No 139
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.44 E-value=0.00022 Score=66.76 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=39.8
Q ss_pred eEEEecCCCCCCCCCC---CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH
Q 004512 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (748)
Q Consensus 586 rli~lDyDGTL~p~~~---~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L 636 (748)
++|++|+||||..... ....|.++++++|++|.+ .+..|+++|||+....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTY 54 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhh
Confidence 5899999999986432 224578999999999875 4899999999987643
No 140
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.32 E-value=0.00061 Score=68.28 Aligned_cols=72 Identities=29% Similarity=0.398 Sum_probs=53.3
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc--CCCCceeeecCceEEeecC
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS--GVEKLGLSAEHGYFTRWSK 660 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~--~~~~l~l~aehG~~i~~~~ 660 (748)
-.++||+|+||||+|.. -...| +...|.+|. +.+..|+.+|..++.++..+-. .+++..++||||+-|..+.
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~p---A~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQP---AAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCc---cchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 36899999999999932 33223 344666666 3589999999999986554433 2577889999999998874
No 141
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=96.99 E-value=0.0016 Score=69.11 Aligned_cols=73 Identities=12% Similarity=0.210 Sum_probs=51.8
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC--CC-ceeeecCceEEe
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTR 657 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~--~~-l~l~aehG~~i~ 657 (748)
..++|++|+||||..........+|++.++|.+|.+. +..++|+|+++++.+++.+..+ +. ...+..+|...+
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 3679999999999986422112359999999999975 8899999999998877776543 21 124444554443
No 142
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=96.62 E-value=0.02 Score=56.82 Aligned_cols=164 Identities=19% Similarity=0.223 Sum_probs=101.7
Q ss_pred HhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC-C--CCceeeecCceE
Q 004512 579 AYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V--EKLGLSAEHGYF 655 (748)
Q Consensus 579 ~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~-~--~~l~l~aehG~~ 655 (748)
++++..+-++++|.||||++.. ...++++.+.|++|.. +.++.+|-|-++.-+.+-+|. + .--+..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~r---~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPPR---QKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccccc---ccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 4566677899999999999854 4468999999999875 689999999999888777753 1 123456999998
Q ss_pred EeecCCCcc-eeccc-CCCcchHHHHHHHHHHHhc----cCCCeEEeecCcEEEEEc--ccCCcCchH---------HHH
Q 004512 656 TRWSKNSAW-EICSL-TRDFDWKEIAEPVMKLYTE----TTDGSFIEDKETAIVWHH--QHADPHFGS---------CQA 718 (748)
Q Consensus 656 i~~~~~~~w-~~~~~-~~~~~w~~~v~~vl~~~~~----~~~Gs~iE~K~~sl~~Hy--r~adpe~g~---------~qa 718 (748)
-...+...= +.... .-+...++.+.=++++..+ ...|.+||-+...+-+.- |+|..|-.. .--
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 665532110 00000 0011122333334444432 235999999988876653 666433111 011
Q ss_pred HHHHHHHHhhhcCCCeEEee-CCeEEEEec
Q 004512 719 KELLDHLENVLANEPVVVKR-GQHIVEVKP 747 (748)
Q Consensus 719 ~el~~~l~~~~~~~~v~v~~-Gk~vvEvrP 747 (748)
..++..|.+-.+.+++...- |+-.+.|=|
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP 189 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFP 189 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecC
Confidence 24566777767778887754 444555554
No 143
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.48 E-value=0.4 Score=53.41 Aligned_cols=250 Identities=20% Similarity=0.229 Sum_probs=130.9
Q ss_pred CCCCCEEEEeCcch--hhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHH
Q 004512 188 NPDEDYVWIHDYHL--MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (748)
Q Consensus 188 ~~~~DiVwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~ 265 (748)
+| |+|..=||.- +-+.+.+|++.+..|+.++. ++.+|.==++|-..++... |.+-- .+.+-..|.+
T Consensus 82 ~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~--D~ll~-ifPFE~~~y~-- 149 (373)
T PF02684_consen 82 KP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYV--DHLLV-IFPFEPEFYK-- 149 (373)
T ss_pred CC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHH--hheeE-CCcccHHHHh--
Confidence 55 7777778763 46788999998888887754 3445443356655555542 33211 1111122222
Q ss_pred HHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc--CCceE--EEEeccccc-cCC
Q 004512 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIV--ILGVDDMDL-FKG 340 (748)
Q Consensus 266 ~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~v--il~VdRld~-~KG 340 (748)
+.| +-..|-|+. =+|.-... +. ....++++ .++++ ++-=+|-.. .+.
T Consensus 150 ----------~~g-~~~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rl 201 (373)
T PF02684_consen 150 ----------KHG-VPVTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRL 201 (373)
T ss_pred ----------ccC-CCeEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHH
Confidence 111 113333432 12211110 11 11222332 34433 333566654 455
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
++..++|++++.+++|+++ ++....+. . ..+.+.+.....+.. .+++.. ..+...++
T Consensus 202 lP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m 258 (373)
T PF02684_consen 202 LPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYDAM 258 (373)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHHHH
Confidence 5889999999999999987 65444321 1 112233333222211 123322 34678899
Q ss_pred HhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccCC-----cEEeCCCCHHH
Q 004512 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG-----AIRVNPWNVDA 495 (748)
Q Consensus 421 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----ai~VnP~d~~~ 495 (748)
+.||+.+++| |-+-+|++..|.+....=...-..-- =...+|-..+.|..-.+-| =++-+-.+++.
T Consensus 259 ~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~----iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 259 AAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYF----IAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHH----HHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 9999999999 89999999997631000000000000 0011222455555544422 24456678999
Q ss_pred HHHHHHHHhcCCHH
Q 004512 496 VADAMDSALQMENQ 509 (748)
Q Consensus 496 ~A~ai~~aL~m~~~ 509 (748)
+++++...|++++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999997753
No 144
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.45 E-value=0.12 Score=55.60 Aligned_cols=165 Identities=13% Similarity=0.167 Sum_probs=111.0
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHh-------CCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQ-------HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~-------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g 397 (748)
...++++--...+...+.-++.|...+-++ +|. + |.+|+ |.||..+.|.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 357888888899999999999999855222 232 2 44455 3678777787777764
Q ss_pred CCCCccEEEecCCCChhhHHHHHHhCcE--EEecCCCccCCch--hhhhhhhccCCCccccccCCCCCCCCCCCceEEEe
Q 004512 398 KPGYEPIVIIKEPLSTQDKVPYYAIAEC--CVVNCVRDGMNLV--PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (748)
Q Consensus 398 ~~~~~pV~~~~~~v~~~el~aly~~ADv--~vvtS~~EGmnLv--~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S 473 (748)
.|+.|.+.+--++-++++.++..||. |+-||. -|+-|. ....--|+. |+++-
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcgl---------------------PvcA~ 371 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCGL---------------------PVCAV 371 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCCC---------------------ceeee
Confidence 46678888888899999999999995 555663 455444 334444432 66666
Q ss_pred CCCCccccc---CCcEEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004512 474 EFIGCSPSL---SGAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (748)
Q Consensus 474 e~~G~~~~l---~~ai~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 537 (748)
.|.-..|.+ .+|++++ |.+++|+.|..+.+. +..+-. +.++-+++..-.+|.++.-+.
T Consensus 372 ~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 372 NFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred cchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 776444444 2699998 899999999999983 222222 333444444557777655443
No 145
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.45 E-value=0.0039 Score=58.45 Aligned_cols=57 Identities=21% Similarity=0.339 Sum_probs=44.5
Q ss_pred eEEEecCCCCCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC--------hhhHhhhhcCC
Q 004512 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG--------KDSLGNWFSGV 643 (748)
Q Consensus 586 rli~lDyDGTL~p~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~--------~~~L~~~~~~~ 643 (748)
|+|++|+||||+.... ....+.+++.++|+.|.+. +..++|+|+++ .+.+++++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995321 1235678999999999854 89999999999 67777777643
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.32 E-value=0.0064 Score=57.12 Aligned_cols=55 Identities=15% Similarity=0.150 Sum_probs=42.0
Q ss_pred eEEEecCCCCCCCCCC--CCC-------CCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHhhhhc
Q 004512 586 RLILLDYDGTVMPQTS--EDK-------RPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWFS 641 (748)
Q Consensus 586 rli~lDyDGTL~p~~~--~~~-------~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~~~ 641 (748)
++|++|+||||++..- ... .+.+++.++|+.|.+. +..++|+|++ ........+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHHH
Confidence 5899999999998631 111 2578999999999864 7899999999 6665555553
No 147
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=96.23 E-value=0.023 Score=59.54 Aligned_cols=86 Identities=21% Similarity=0.460 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCcchhhHHHHHHhhcc------CCeEEEEecCC-CCc---hhHhh--cCcch-----
Q 004512 178 VFADKVMEVINP---DEDYVWIHDYHLMVLPSFLRKRFH------RVKVGFFLHSP-FPS---SEIYR--TLPVR----- 237 (748)
Q Consensus 178 ~fA~~i~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~ig~flH~P-fPs---~e~fr--~lp~r----- 237 (748)
.|+.++++.++. .-|+||+||+|..++|.+||.... ++++.|++|.. |-. .+.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~ 197 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL 197 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc
Confidence 455555555542 349999999999999999999753 59999999964 321 12222 13321
Q ss_pred ---------HHHHHHhhhcCEEEeeCHHHHHHHHH
Q 004512 238 ---------DEILKSLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 238 ---------~~il~~ll~~DlIgF~t~~~~~~Fl~ 263 (748)
..+--|+..||.|..-++.|++.-++
T Consensus 198 ~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 198 DEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred cccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 13446689999999999999977654
No 148
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.18 E-value=0.011 Score=61.72 Aligned_cols=63 Identities=17% Similarity=0.305 Sum_probs=48.7
Q ss_pred cccCChHHHHHHhhccCceEEEecCCCCCCCCCC---C--C--------------------------CCCCHHHHHHHHH
Q 004512 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS---E--D--------------------------KRPSTEVLSILND 616 (748)
Q Consensus 568 f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~---~--~--------------------------~~p~~~~~~~L~~ 616 (748)
..=.++++|.+.....+..+|+||+||||+...+ . . ..|-+.+.++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3347889999998877777999999999997654 1 0 1222348889999
Q ss_pred HhcCCCCcEEEEcCC
Q 004512 617 LCNDPKNAVFIVSGR 631 (748)
Q Consensus 617 L~~d~~~~V~IvSGR 631 (748)
|.+. +..++|||+|
T Consensus 126 l~~~-G~~i~iVTnr 139 (237)
T TIGR01672 126 HQRR-GDAIFFVTGR 139 (237)
T ss_pred HHHC-CCEEEEEeCC
Confidence 8864 8899999999
No 149
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.10 E-value=0.012 Score=62.51 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=44.6
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
..++|++|+||||.........-+|.+.++|.+|.+ .+..++|+|+.+.+.+...+..
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eccEEEEecCCCccCCCCccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHH
Confidence 468999999999998643211115889999999996 4889999998877777766654
No 150
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.86 E-value=0.0059 Score=64.51 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=38.5
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
++|++|+||||.........+.+++.++|++|.+. +..++++|||+...
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 58999999999964321122667999999999865 89999999987764
No 151
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.65 E-value=1 Score=49.67 Aligned_cols=289 Identities=14% Similarity=0.116 Sum_probs=141.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc--hhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHh
Q 004512 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL 244 (748)
Q Consensus 167 ~~w~~Y~~vN~~fA~~i~~~~~~~~DiVwvhDyh--l~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~l 244 (748)
..|..|.+.= +.+.+. +| |++..=|+. -..+...+|+..|++||.++. -| .+|.--|.|-..+..
T Consensus 69 ~llk~~~~~~----~~i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV---~P--sVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELV----RYILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV---SP--SVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHH----HHHHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE---Cc--ceeeechhhHHHHHH-
Confidence 4566666433 333332 44 677666655 235788999999999998754 23 344323444333332
Q ss_pred hhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc-
Q 004512 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (748)
Q Consensus 245 l~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~- 323 (748)
.+|++.--.+.... |.+. .|+. ..|-|+. =.|.-.+.+ + .+..|+++
T Consensus 136 -~~D~lLailPFE~~-~y~k----~g~~---------~~yVGHp--------l~d~i~~~~-----~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEPA-FYDK----FGLP---------CTYVGHP--------LADEIPLLP-----D----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCHH-HHHh----cCCC---------eEEeCCh--------hhhhccccc-----c----HHHHHHHhC
Confidence 24554322221111 2210 1111 2233332 122211211 1 12355555
Q ss_pred ---CCceEEEEec--cccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 004512 324 ---DGKIVILGVD--DMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (748)
Q Consensus 324 ---~~~~vil~Vd--Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~ 398 (748)
..+.+.+--| |=+-.+-.+..++|+++|.+++|+++ ++.=..+ ..++.++ .+..+.-..
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~---~~~~~~~~~---- 247 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRII---EEALKWEVA---- 247 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHH---HHHhhcccc----
Confidence 3344444333 35566778888999999999999988 5433322 2333322 222211100
Q ss_pred CCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc
Q 004512 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478 (748)
Q Consensus 399 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 478 (748)
.+..+ +...+....+..||+.+..| |.+.+|++.|+.+....-.+.-..--. -..+|-..+++.
T Consensus 248 ---~~~~~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~i----ak~lvk~~yisL 311 (381)
T COG0763 248 ---GLSLI----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFI----AKRLVKLPYVSL 311 (381)
T ss_pred ---CceEE----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHH----HHHhccCCcccc
Confidence 01121 23457888999999999998 899999999976310000000000000 001111223332
Q ss_pred ccccCCcEEe-----CCCCHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHhCCHHHHHH
Q 004512 479 SPSLSGAIRV-----NPWNVDAVADAMDSALQMENQ--EKILRHEKHYKYISSHDVAYWAK 532 (748)
Q Consensus 479 ~~~l~~ai~V-----nP~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~V~~~~~~~W~~ 532 (748)
.-.+-|-.+| .-..++.+|+++...+.++.. +.++....+++++.+..+..=+.
T Consensus 312 pNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA 372 (381)
T COG0763 312 PNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAA 372 (381)
T ss_pred hHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 2222221111 123478999999999988731 22334444566665553443333
No 152
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=95.60 E-value=0.0038 Score=60.61 Aligned_cols=55 Identities=18% Similarity=0.235 Sum_probs=38.9
Q ss_pred eEEEecCCCCCCCCCC----CCCC-----CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 586 RLILLDYDGTVMPQTS----EDKR-----PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 586 rli~lDyDGTL~p~~~----~~~~-----p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
+++|||+||||+.... .... ..+. .+|++|.+. +..++|+||+....+++.+..+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHHHc
Confidence 6899999999998421 1000 1111 268888754 8899999999998888877653
No 153
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.47 E-value=0.021 Score=56.22 Aligned_cols=49 Identities=20% Similarity=0.348 Sum_probs=36.7
Q ss_pred CceEEEecCCCCCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 584 NSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
+.+++++|.||||....+.. ..+-+++.++|++|.+. +..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 35789999999999743211 11347899999999854 899999997554
No 154
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.19 E-value=0.004 Score=59.93 Aligned_cols=97 Identities=16% Similarity=0.274 Sum_probs=48.4
Q ss_pred HHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcch-----HHHHHH-hhhcCEEEeeCHH
Q 004512 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-----DEILKS-LLNSDLIGFHTFD 256 (748)
Q Consensus 183 i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r-----~~il~~-ll~~DlIgF~t~~ 256 (748)
+++..++ |+|++|.++...+...... ++++.+++|.+++.........+. ..+.+. ...+|.+..-+..
T Consensus 75 ~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~ 149 (177)
T PF13439_consen 75 LIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSES 149 (177)
T ss_dssp HHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHH
T ss_pred HHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHH
Confidence 3444455 8999999887654433222 789999999887421111111111 111122 2457888777765
Q ss_pred HHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCccccc
Q 004512 257 YARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (748)
Q Consensus 257 ~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (748)
-++.+.+ .|++ ..++.++|+|||++.|+
T Consensus 150 ~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 150 TKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 5555543 2321 24788999999999884
No 155
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.06 E-value=0.048 Score=56.84 Aligned_cols=62 Identities=15% Similarity=0.264 Sum_probs=48.1
Q ss_pred cCChHHHHHHhhccCceEEEecCCCCCCCCCC-------------------------------CCCCCCHHHHHHHHHHh
Q 004512 570 KLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-------------------------------EDKRPSTEVLSILNDLC 618 (748)
Q Consensus 570 ~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~-------------------------------~~~~p~~~~~~~L~~L~ 618 (748)
=.++++|.+.....+...|.+|+|||++...| ..+.|-+.++++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 47788999887665667999999999995321 02345567999999997
Q ss_pred cCCCCcEEEEcCCC
Q 004512 619 NDPKNAVFIVSGRG 632 (748)
Q Consensus 619 ~d~~~~V~IvSGR~ 632 (748)
+. +..+++||||+
T Consensus 128 ~~-G~~I~iVTnR~ 140 (237)
T PRK11009 128 KR-GDSIYFITGRT 140 (237)
T ss_pred HC-CCeEEEEeCCC
Confidence 54 89999999996
No 156
>PRK10444 UMP phosphatase; Provisional
Probab=94.99 E-value=0.016 Score=60.81 Aligned_cols=50 Identities=10% Similarity=0.195 Sum_probs=40.2
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
+++++|.||||.... .+.+.+.++|++|.+. +..++++|||+....+...
T Consensus 2 ~~v~~DlDGtL~~~~----~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~~~~~~ 51 (248)
T PRK10444 2 KNVICDIDGVLMHDN----VAVPGAAEFLHRILDK-GLPLVLLTNYPSQTGQDLA 51 (248)
T ss_pred cEEEEeCCCceEeCC----eeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHH
Confidence 579999999998642 4678899999999965 8899999999986544443
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=94.75 E-value=0.02 Score=62.19 Aligned_cols=50 Identities=16% Similarity=0.237 Sum_probs=39.1
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (748)
-++++||+||||.... .+-+++.++|++|.+. +..++++|+|+....++.
T Consensus 28 ~~~~~~D~DGtl~~~~----~~~~ga~e~l~~lr~~-g~~~~~~TN~~~~~~~~~ 77 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----KLIEGVPETLDMLRSM-GKKLVFVTNNSTKSRAQY 77 (311)
T ss_pred CCEEEEeCcCCeEeCC----ccCcCHHHHHHHHHHC-CCEEEEEeCCCCCCHHHH
Confidence 4699999999998642 3557789999998865 889999999995443333
No 158
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.71 E-value=0.95 Score=50.94 Aligned_cols=140 Identities=11% Similarity=0.105 Sum_probs=81.1
Q ss_pred ceEEEEecc-ccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC------
Q 004512 326 KIVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK------ 398 (748)
Q Consensus 326 ~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~------ 398 (748)
..++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+ .+-....
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~----~g~~~~~~~~~~~ 273 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILED----LGWQLEGSSEDQT 273 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHh----cCceecCCccccc
Confidence 345667777 55667889999999998655 5543 55444232 233333333321 1110000
Q ss_pred --CCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCC
Q 004512 399 --PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (748)
Q Consensus 399 --~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (748)
....++.++. ...+..++|+.||++|..| |-+..|+++++. |.|+--+.
T Consensus 274 ~~~~~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~---------------------P~Ilip~~ 324 (396)
T TIGR03492 274 SLFQKGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK---------------------PVIQLPGK 324 (396)
T ss_pred hhhccCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC---------------------CEEEEeCC
Confidence 0000133222 2467899999999999986 356699999976 23332211
Q ss_pred Cc------ccc---c-CCcEEeCCCCHHHHHHHHHHHhcCC
Q 004512 477 GC------SPS---L-SGAIRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 477 G~------~~~---l-~~ai~VnP~d~~~~A~ai~~aL~m~ 507 (748)
+- .+. + .+++.+...+++.+++++.++++++
T Consensus 325 ~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 325 GPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 11 011 1 3456666678899999999999864
No 159
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=94.67 E-value=0.024 Score=56.66 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=39.2
Q ss_pred CceEEEecCCCCCCCCC----CCCCCCCHHH---HHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 584 NSRLILLDYDGTVMPQT----SEDKRPSTEV---LSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~----~~~~~p~~~~---~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
.-++|++|+||||+... .......... ...++.|.+ .+..++|+|||....+.+.+..+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 47899999999999741 1010011111 135566654 47899999999998888777653
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.65 E-value=0.034 Score=58.37 Aligned_cols=52 Identities=19% Similarity=0.340 Sum_probs=41.1
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC---CChhhHhhhhcC
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~~~~ 642 (748)
+++++|+||||.... . +-+++.++|++|.+. +..|+++|| |+.+.+.+.+..
T Consensus 2 ~~~~~D~DGtl~~~~--~--~i~~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK--E--RIPEAETFVHELQKR-DIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CEEEEeCCCceEcCC--e--eCcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHH
Confidence 589999999999743 2 234789999999965 889999995 888887777654
No 161
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=94.63 E-value=0.022 Score=60.88 Aligned_cols=44 Identities=18% Similarity=0.305 Sum_probs=34.9
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (748)
++|++|+||||.... .+-+++.++|++|.+. +..++++|||+..
T Consensus 3 ~~~~~D~DGtl~~~~----~~~~ga~e~l~~L~~~-g~~~~~~Tnns~~ 46 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE----RVVPGAPELLDRLARA-GKAALFVTNNSTK 46 (279)
T ss_pred cEEEEeCCCceEcCC----eeCcCHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 589999999998632 2455689999999864 7899999997744
No 162
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.57 E-value=0.12 Score=50.26 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=50.1
Q ss_pred hccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 581 ~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
++..-+.|++|+|.||+|.... ..+|++++-+..+.. .+..|+|+|-.+..-+..+...+
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd~~--~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWDNP--DATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHcCCcEEEEeccCceecccCC--CCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc
Confidence 3456789999999999998643 368899999999886 48999999999988888887654
No 163
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.42 E-value=0.029 Score=55.54 Aligned_cols=47 Identities=23% Similarity=0.326 Sum_probs=37.2
Q ss_pred eEEEecCCCCCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 586 rli~lDyDGTL~p~~~-----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
+++|+|.||||+...+ ....+.|++.++|++|.+. +..++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 7899999999995332 2344668999999999864 799999998763
No 164
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=94.13 E-value=0.23 Score=50.75 Aligned_cols=137 Identities=16% Similarity=0.231 Sum_probs=82.1
Q ss_pred HHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc-C-C-C-CceeeecCceEEeecCCCcceecc-cC-CCcchHHHHHHHH
Q 004512 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS-G-V-E-KLGLSAEHGYFTRWSKNSAWEICS-LT-RDFDWKEIAEPVM 683 (748)
Q Consensus 610 ~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~-~-~-~-~l~l~aehG~~i~~~~~~~w~~~~-~~-~~~~w~~~v~~vl 683 (748)
+.++|++|.+ +..|+||||-++..+++-+. . + . -.++.+|||+.....+...|.... .. .+...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899885 68999999999998777773 2 1 1 236889999998887665664321 00 1112234444444
Q ss_pred HHHhc----cCCCeEEeecCcEEEEEc--ccCCcCchH--------HHH-HHHHHHHHhhhcCCCeEEe-eCCeEEEEec
Q 004512 684 KLYTE----TTDGSFIEDKETAIVWHH--QHADPHFGS--------CQA-KELLDHLENVLANEPVVVK-RGQHIVEVKP 747 (748)
Q Consensus 684 ~~~~~----~~~Gs~iE~K~~sl~~Hy--r~adpe~g~--------~qa-~el~~~l~~~~~~~~v~v~-~Gk~vvEvrP 747 (748)
++..+ ..-|.+||.++..+.+-- |+|..|--. ... +.+++.|.+-+...++++. -|.--+.|-|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44332 234999999999999874 555322110 011 2467777776777778775 5677777766
Q ss_pred C
Q 004512 748 Q 748 (748)
Q Consensus 748 ~ 748 (748)
.
T Consensus 159 ~ 159 (220)
T PF03332_consen 159 K 159 (220)
T ss_dssp T
T ss_pred C
Confidence 3
No 165
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.12 E-value=0.037 Score=53.15 Aligned_cols=46 Identities=22% Similarity=0.284 Sum_probs=37.2
Q ss_pred eEEEecCCCCCCCCCCC-------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004512 586 RLILLDYDGTVMPQTSE-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~-------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (748)
.+++||.||||+...+. ...+.+++.++|+.|.+. +..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 37899999999987641 124678999999999864 89999999876
No 166
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=94.05 E-value=0.0035 Score=74.69 Aligned_cols=170 Identities=19% Similarity=0.111 Sum_probs=103.4
Q ss_pred CChHHHHHHhhccCceEEEecCCCCCCCCCCCCC--CCCHHHHHHHHHHhcCCCCcEEEEcCCChhh----------Hhh
Q 004512 571 LGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDK--RPSTEVLSILNDLCNDPKNAVFIVSGRGKDS----------LGN 638 (748)
Q Consensus 571 l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~--~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~----------L~~ 638 (748)
+...++......-++-|.++||||||.++..+-+ ..+-.+..+-.+.++ ....+++|||++.. ..+
T Consensus 175 fpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~~~pigid~~r 252 (732)
T KOG1050|consen 175 FPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVKALPIGIDVQR 252 (732)
T ss_pred CChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeeeecccccchHH
Confidence 4556666666666778999999999998763321 122222222222222 23467799999775 666
Q ss_pred hhcCCCCceeeecCceEEeecCCCcceec-ccCC-----CcchHHHHHHHHHHHh--------------ccCCCeEEeec
Q 004512 639 WFSGVEKLGLSAEHGYFTRWSKNSAWEIC-SLTR-----DFDWKEIAEPVMKLYT--------------ETTDGSFIEDK 698 (748)
Q Consensus 639 ~~~~~~~l~l~aehG~~i~~~~~~~w~~~-~~~~-----~~~w~~~v~~vl~~~~--------------~~~~Gs~iE~K 698 (748)
+. .+.++..+++||.+++.+.+..-.-+ .+.. ...+....++.++.|. .+++|.-+|+-
T Consensus 253 ~v-~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~ 331 (732)
T KOG1050|consen 253 FV-KLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEEL 331 (732)
T ss_pred hh-ccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHH
Confidence 66 35688999999999987642111100 1111 1234455666666553 35666666667
Q ss_pred CcEEEEEcccCCcCchHHHHHHHHHHHHhhhcCC-CeEEeeCCeEEEEec
Q 004512 699 ETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEVKP 747 (748)
Q Consensus 699 ~~sl~~Hyr~adpe~g~~qa~el~~~l~~~~~~~-~v~v~~Gk~vvEvrP 747 (748)
..++..|||..+.+|+...+ ..+..+.... ..+..++..|.|++|
T Consensus 332 k~~v~~~v~rIn~~f~~~~~----~pV~~~~~~~~~~~l~a~~~Vaev~~ 377 (732)
T KOG1050|consen 332 KFCVSVHVRRINEKFGSASY----QPVHSLLKDLPFLELLALYKVAEVCP 377 (732)
T ss_pred HHHhHhhhhhhhhccCCccc----ceEEEeeccCCHHHHhhhHHhhhhee
Confidence 89999999999999997332 2222222233 366777778888776
No 167
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.99 E-value=0.11 Score=55.96 Aligned_cols=57 Identities=18% Similarity=0.317 Sum_probs=45.8
Q ss_pred CceEEEecCCCCCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 584 NSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~---------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
+.+++++|+||||...... ...+.+++.+.|++|.+. +..++|+|||+....+..+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHHH
Confidence 4579999999999975432 456789999999999864 88999999999887665544
No 168
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.60 E-value=0.15 Score=50.33 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=42.5
Q ss_pred cCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC-hhhHhhhh
Q 004512 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGNWF 640 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~-~~~L~~~~ 640 (748)
-.-+++++|+||||+.... ..+.+++.+.|+.|.+. +..++|+|+.+ ...++.++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~--~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH--NEAYPALRDWIEELKAA-GRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred CCCCEEEEecCCccccCCC--CCcChhHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHH
Confidence 3568999999999997642 24678899999999864 68999999998 45444444
No 169
>PRK06769 hypothetical protein; Validated
Probab=93.29 E-value=0.066 Score=52.97 Aligned_cols=48 Identities=19% Similarity=0.184 Sum_probs=38.5
Q ss_pred ceEEEecCCCCCCCCCC----CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 585 SRLILLDYDGTVMPQTS----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~----~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
=|+|++|-||||.+... ....+-+++.++|++|.+. +..++|+|+.+.
T Consensus 4 ~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~~ 55 (173)
T PRK06769 4 IQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQPG 55 (173)
T ss_pred CcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCch
Confidence 47999999999987643 2334668999999999864 789999998763
No 170
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=93.29 E-value=16 Score=40.44 Aligned_cols=254 Identities=14% Similarity=0.063 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHHHHh--hhcCEEEee
Q 004512 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGFH 253 (748)
Q Consensus 176 N~~fA~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il~~l--l~~DlIgF~ 253 (748)
=..|++.+. ..+| |+|.||.=-.-.+..-+-....++||+.. |-=-=+.|. ..|.-+|+.|-+ --||+----
T Consensus 56 ~~~~~~~~~-~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~~ 129 (346)
T PF02350_consen 56 IIELADVLE-REKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFAP 129 (346)
T ss_dssp HHHHHHHHH-HHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEES
T ss_pred HHHHHHHHH-hcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhccC
Confidence 334444443 4467 89999876665555555555567887653 211001111 123345555543 236776666
Q ss_pred CHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHcCCceEEEEec
Q 004512 254 TFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVD 333 (748)
Q Consensus 254 t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd 333 (748)
|..+.++.++ .|.+. ++ +. .+-.+++|.-........+.. ....+.....++.+++..-
T Consensus 130 t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H 188 (346)
T PF02350_consen 130 TEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLH 188 (346)
T ss_dssp SHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S
T ss_pred CHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeC
Confidence 7777777664 24321 11 11 122456664322211110000 0112222234555566565
Q ss_pred ccccc---CCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCC
Q 004512 334 DMDLF---KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (748)
Q Consensus 334 Rld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~ 410 (748)
|.... ......+.+++.+.+. +++. +|....++ + ...+.+.+...++ ..|.++ .+
T Consensus 189 ~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~~-~~ 246 (346)
T PF02350_consen 189 PVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKKY---------DNVRLI-EP 246 (346)
T ss_dssp -CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEEEE---
T ss_pred cchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhccc---------CCEEEE-CC
Confidence 54433 3466777888888776 5544 54444211 1 2223333332222 136655 58
Q ss_pred CChhhHHHHHHhCcEEEecCCCccCCchhh-hhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc---CCcE
Q 004512 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPY-KYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAI 486 (748)
Q Consensus 411 v~~~el~aly~~ADv~vvtS~~EGmnLv~~-Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai 486 (748)
++..++.++++.|+++|-.| + ... ||.+++. |+|.=...|-.++. ..++
T Consensus 247 l~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~---------------------P~v~iR~~geRqe~r~~~~nv 299 (346)
T PF02350_consen 247 LGYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGK---------------------PVVNIRDSGERQEGRERGSNV 299 (346)
T ss_dssp --HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT-----------------------EEECSSS-S-HHHHHTTSEE
T ss_pred CCHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCC---------------------eEEEecCCCCCHHHHhhcceE
Confidence 99999999999999998777 2 344 9999975 34443444554444 2456
Q ss_pred EeCCCCHHHHHHHHHHHhcC
Q 004512 487 RVNPWNVDAVADAMDSALQM 506 (748)
Q Consensus 487 ~VnP~d~~~~A~ai~~aL~m 506 (748)
+|. .|.+++.++|.+++..
T Consensus 300 lv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 300 LVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EET-SSHHHHHHHHHHHHH-
T ss_pred EeC-CCHHHHHHHHHHHHhC
Confidence 665 7999999999999985
No 171
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=93.17 E-value=5.9 Score=44.05 Aligned_cols=72 Identities=11% Similarity=0.098 Sum_probs=48.7
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
|. +.++++..++.++++.|++++-.|- |.. .||.+.|.+ ++.+.| =.+.+.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~P--------------------vv~l~~---R~e~~~ 314 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGVP--------------------TINIGT---RQKGRL 314 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCCC--------------------EEeecC---Cchhhh
Confidence 55 4568999999999999999985442 122 799998752 333322 222232
Q ss_pred -C-c-EEeCCCCHHHHHHHHHHHhc
Q 004512 484 -G-A-IRVNPWNVDAVADAMDSALQ 505 (748)
Q Consensus 484 -~-a-i~VnP~d~~~~A~ai~~aL~ 505 (748)
| . +.| +.|.+++.+++.++++
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 2 446 6789999999999654
No 172
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.09 E-value=1.7 Score=49.78 Aligned_cols=107 Identities=17% Similarity=0.265 Sum_probs=64.0
Q ss_pred HHHc---CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 004512 320 KEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396 (748)
Q Consensus 320 r~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~ 396 (748)
|++| .|..++.+..++ .|=-+..+..+.++|+.-|+-+ |++...+. .+ ++.+.+.+.+ .
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~----~ 337 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAA----H 337 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHH----T
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHH----c
Confidence 4455 356666667776 5667889999999999999876 76665442 11 1233333333 2
Q ss_pred CCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 397 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
|.. -..|+|. +..+.++..+.|+.+|||+-|..+-| +.+.+||+.+|.
T Consensus 338 Gv~-~~Ri~f~-~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 338 GVD-PDRIIFS-PVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp TS--GGGEEEE-E---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred CCC-hhhEEEc-CCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 432 2357765 46788999999999999999987766 467789999964
No 173
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=92.77 E-value=0.099 Score=51.13 Aligned_cols=44 Identities=25% Similarity=0.379 Sum_probs=31.4
Q ss_pred eEEEecCCCCCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004512 586 RLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSG 630 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (748)
++.++|+||||+...+... ..++++.+.|++|.++ +..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEeC
Confidence 4789999999997543211 1245799999999865 899999993
No 174
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.66 E-value=0.089 Score=51.55 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=36.1
Q ss_pred ceEEEecCCCCCCCCCCC--------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004512 585 SRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~--------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (748)
++++|||.||||....+. ...|-+++.++|++|.+. +..++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 368999999999874331 224568899999999864 7899999985
No 175
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.53 E-value=0.13 Score=56.68 Aligned_cols=47 Identities=17% Similarity=0.344 Sum_probs=38.5
Q ss_pred CceEEEecCCCCCCCCCC--------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCC
Q 004512 584 NSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGR 631 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~--------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR 631 (748)
+++++|||.||||+...+ ....|.|++.+.|..|.+ .+..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998642 245678999999999975 57899999985
No 176
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.47 E-value=0.049 Score=48.99 Aligned_cols=43 Identities=21% Similarity=0.385 Sum_probs=32.3
Q ss_pred EEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 588 i~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
+++|.||||... ..|-|++.++|++|.+. +..++++|-.+...
T Consensus 1 ~l~D~dGvl~~g----~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s 43 (101)
T PF13344_consen 1 FLFDLDGVLYNG----NEPIPGAVEALDALRER-GKPVVFLTNNSSRS 43 (101)
T ss_dssp EEEESTTTSEET----TEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-
T ss_pred CEEeCccEeEeC----CCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCC
Confidence 689999999963 33567889999999875 78999999776444
No 177
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.33 E-value=0.24 Score=48.79 Aligned_cols=62 Identities=23% Similarity=0.338 Sum_probs=44.2
Q ss_pred ccccCChHHHHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCC-CcEEEEcCCC
Q 004512 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRG 632 (748)
Q Consensus 567 ~f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~-~~V~IvSGR~ 632 (748)
++..++.+.- -.++..=++|+||.|.||++.. ...+++++.+.++++.+.-. ..|+|+|-..
T Consensus 25 si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~~--~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 25 SIRDIDFEAN--HLKKKGIKALIFDKDNTLTPPY--EDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred ChhhCCcchh--hhhhcCceEEEEcCCCCCCCCC--cCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 4445554330 1345677999999999999864 33467899999999887533 2699999863
No 178
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.29 E-value=0.11 Score=55.09 Aligned_cols=53 Identities=26% Similarity=0.392 Sum_probs=40.6
Q ss_pred cCceEEEecCCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhH
Q 004512 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L 636 (748)
.++.++++|+|+|++...+ ..+.|-+++.+.|+.|.+. +..++|+|+|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIFYVSNRSEKEK 148 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEEEEeCCCcchH
Confidence 4578999999999985442 0234558899999999864 789999999985543
No 179
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.14 E-value=0.18 Score=58.46 Aligned_cols=50 Identities=22% Similarity=0.318 Sum_probs=38.7
Q ss_pred cCceEEEecCCCCCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 583 TNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~~~---------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
.+.+++|||.||||....+.. ..+.+.+.+.|++|.++ +..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 457899999999999644311 12468899999999865 899999998654
No 180
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.04 E-value=0.27 Score=50.88 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=40.9
Q ss_pred CceEEEecCCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
++.+++||+|-|+....| ..+.+-+.++++++.|.+. +..|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEEL 149 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHH
Confidence 578999999999886431 1345668999999998864 89999999999654
No 181
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=91.94 E-value=0.25 Score=47.59 Aligned_cols=57 Identities=21% Similarity=0.287 Sum_probs=39.3
Q ss_pred cCceEEEecCCCCCCCCCC-------C-CCC--CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 583 TNSRLILLDYDGTVMPQTS-------E-DKR--PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~-------~-~~~--p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
.+-+++++|.||||++-.- + .++ -+---+..|.+ .+..|+|+|||.-.-++++...+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~----~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLK----SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHH----cCCeEEEEeCCCCHHHHHHHHHc
Confidence 3468999999999997431 0 111 12233444444 27899999999999999998653
No 182
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.87 E-value=0.25 Score=50.57 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.|++.++|+.|.+ .+..++|+||.....++..+..
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 45677788888775 4889999999999888887765
No 183
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.84 E-value=0.23 Score=52.39 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=48.2
Q ss_pred CceEEEecCCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh
Q 004512 584 NSRLILLDYDGTVMPQTS-----------------E-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~-----------------~-------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (748)
.+-+++||+|+|+....| . .+.+-+.+++.++.|.+ .+..|+++|||+-..-+.-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 467999999999984221 1 34556899999999886 4899999999986533222
Q ss_pred hcCCCCceeeecCceEEeec
Q 004512 640 FSGVEKLGLSAEHGYFTRWS 659 (748)
Q Consensus 640 ~~~~~~l~l~aehG~~i~~~ 659 (748)
..++...|+-+.....+|..
T Consensus 179 ~~NL~kaGy~~~~~LiLR~~ 198 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKDP 198 (275)
T ss_pred HHHHHHcCCCCcceeeecCC
Confidence 22222334433334455533
No 184
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=91.56 E-value=0.13 Score=51.08 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=36.8
Q ss_pred ceEEEecCCCCCCCCCC------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCC
Q 004512 585 SRLILLDYDGTVMPQTS------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~ 632 (748)
.++++||-||||+-... ....|-+++.++|++|.+. +..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 47999999999975431 1234668899999999864 78999999876
No 185
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=90.74 E-value=0.32 Score=49.49 Aligned_cols=36 Identities=11% Similarity=-0.023 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.+.+.+.|+.|.+. +..++|+||-....++.++..
T Consensus 86 ~~~g~~~~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~ 121 (219)
T TIGR00338 86 LTEGAEELVKTLKEK-GYKVAVISGGFDLFAEHVKDK 121 (219)
T ss_pred cCCCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHH
Confidence 457888899998864 789999999887777666643
No 186
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=90.65 E-value=0.43 Score=44.70 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=40.2
Q ss_pred CCEEEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCcchHHHH-----HHhhhcCEEEeeCHHHHHHHHH
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp~r~~il-----~~ll~~DlIgF~t~~~~~~Fl~ 263 (748)
-|+|++|+++..++..+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|...+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 499999998877777777744 48999999997543211 12222222 3346689999998877777654
No 187
>PLN02954 phosphoserine phosphatase
Probab=90.43 E-value=0.31 Score=49.83 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.+++.++|+.|.+. +..++|+||.....++..+..
T Consensus 85 l~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~~l~~ 120 (224)
T PLN02954 85 LSPGIPELVKKLRAR-GTDVYLVSGGFRQMIAPVAAI 120 (224)
T ss_pred CCccHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHH
Confidence 346778888888764 789999999999888777654
No 188
>PTZ00445 p36-lilke protein; Provisional
Probab=90.40 E-value=0.51 Score=48.01 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=46.8
Q ss_pred ChHHHHHHhhccCceEEEecCCCCCCCCCC------C------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh
Q 004512 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTS------E------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (748)
Q Consensus 572 ~~~~i~~~y~~s~~rli~lDyDGTL~p~~~------~------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~ 634 (748)
..+.+++.++...-++|++|+|-||++..+ . ....+|++...+.+|.+ .+..|+|||=-+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 345567777788899999999999998332 1 12367899999999875 48999999865543
No 189
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.38 E-value=0.27 Score=49.43 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
.|++.++|+.|.+. ..++|+||.....++..+..
T Consensus 70 ~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 70 LPGAVEFLDWLRER--FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHHHH
Confidence 46677889998863 78999999999988877654
No 190
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.29 E-value=23 Score=39.41 Aligned_cols=136 Identities=15% Similarity=0.203 Sum_probs=86.5
Q ss_pred ceEEEEecccccc-CCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 326 KIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 326 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
+-+++..-|-.-. +++...+.|+.++++++|+.. +| .|.--+ +.. ++++ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 4666777776655 999999999999999998865 33 232111 222 2222 1122321 136
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC-
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (748)
+++ .++...+...|...|-+.+--| |=..-||-.-+.+ ++++=+.+.=++.+.
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P--------------------vl~lR~~TERPE~v~a 318 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP--------------------VLVLRDTTERPEGVEA 318 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc--------------------EEeeccCCCCccceec
Confidence 655 5899999999999997766554 2334566665431 455544444445553
Q ss_pred Cc-EEeCCCCHHHHHHHHHHHhcCCH
Q 004512 484 GA-IRVNPWNVDAVADAMDSALQMEN 508 (748)
Q Consensus 484 ~a-i~VnP~d~~~~A~ai~~aL~m~~ 508 (748)
|. ++|+ .|.+.+.+++.+++++++
T Consensus 319 gt~~lvg-~~~~~i~~~~~~ll~~~~ 343 (383)
T COG0381 319 GTNILVG-TDEENILDAATELLEDEE 343 (383)
T ss_pred CceEEeC-ccHHHHHHHHHHHhhChH
Confidence 43 5555 478999999999999865
No 191
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=89.92 E-value=0.61 Score=46.49 Aligned_cols=35 Identities=14% Similarity=-0.123 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
.+++.++|+.|.+. +..++|+||.....++.++..
T Consensus 82 ~~g~~e~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~ 116 (201)
T TIGR01491 82 RDYAEELVRWLKEK-GLKTAIVSGGIMCLAKKVAEK 116 (201)
T ss_pred CccHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHH
Confidence 45667888888754 789999999998888777654
No 192
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=89.34 E-value=0.65 Score=47.40 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.+++.++|+.|.+ .+..++|+||.....++.++..
T Consensus 71 l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 106 (214)
T TIGR03333 71 IREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEG 106 (214)
T ss_pred ccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHh
Confidence 34667788888875 4789999999998888877654
No 193
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.23 E-value=0.75 Score=50.19 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=46.6
Q ss_pred CceEEEecCCCCCCCCC--CC------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 584 NSRLILLDYDGTVMPQT--SE------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~--~~------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
..++|++|.|+||..-. .. ...+.+++.+.|++|.+ .+..++|+|..+...+.+.|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 36899999999999754 11 12345899999999986 4899999999999988888865
No 194
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=89.23 E-value=0.35 Score=52.90 Aligned_cols=35 Identities=14% Similarity=-0.121 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
+.|.+.++|+.|.+. +..++|+||-.....+....
T Consensus 182 l~pGa~elL~~Lk~~-G~~~aIvSgg~~~~~~~l~~ 216 (322)
T PRK11133 182 LMPGLTELVLKLQAL-GWKVAIASGGFTYFADYLRD 216 (322)
T ss_pred CChhHHHHHHHHHHc-CCEEEEEECCcchhHHHHHH
Confidence 457777888888754 78999999988655544443
No 195
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=88.92 E-value=0.68 Score=44.50 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=44.7
Q ss_pred CceEEEecCCCCCCCCC--C--CCC-------------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 584 NSRLILLDYDGTVMPQT--S--EDK-------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~--~--~~~-------------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
++.+++||.||||+... + ... .+-|.+.+.|+.|.. +..++|+|+...+.++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 46789999999999853 1 100 235789999999973 6899999999999888877
Q ss_pred cCC
Q 004512 641 SGV 643 (748)
Q Consensus 641 ~~~ 643 (748)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 643
No 196
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=88.74 E-value=8.1 Score=42.32 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=83.2
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCC
Q 004512 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (748)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~ 412 (748)
-.-|++-+....|+++.+... .+ +.++ +.- +.|...++|.+++.+.+.++ ||.. .+..++..++
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPL--sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--VPL--SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--EEC--CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCC
Confidence 446788888777766655321 12 2232 111 12223456777777776664 4532 3566788999
Q ss_pred hhhHHHHHHhCcEEEecCCC-ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc-CCcEEe--
Q 004512 413 TQDKVPYYAIAECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRV-- 488 (748)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~-EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~V-- 488 (748)
.+|+.++++.+|+.++...| .|||...+ .+.+| .++++|+-.-.-..+ ..++.|
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G---------------------~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLG---------------------KKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcC---------------------CeEEEecCChHHHHHHhCCCeEEe
Confidence 99999999999999999876 89987753 23332 378888876655555 335433
Q ss_pred --CCCCHHHHHHHHHHHh
Q 004512 489 --NPWNVDAVADAMDSAL 504 (748)
Q Consensus 489 --nP~d~~~~A~ai~~aL 504 (748)
+.-|...+++|=+++.
T Consensus 314 ~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 314 YGDELDEALVREAQRQLA 331 (360)
T ss_pred ccccCCHHHHHHHHHHHh
Confidence 4445555555544333
No 197
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=88.68 E-value=0.62 Score=45.49 Aligned_cols=35 Identities=14% Similarity=-0.057 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
.+++.+.|+.|.+. +..++|+||.....++.++..
T Consensus 75 ~~g~~~~l~~l~~~-g~~~~ivS~~~~~~i~~~~~~ 109 (177)
T TIGR01488 75 RPGARELISWLKER-GIDTVIVSGGFDFFVEPVAEK 109 (177)
T ss_pred CcCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHH
Confidence 36677888887754 789999999998888877654
No 198
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=88.37 E-value=0.6 Score=48.69 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=37.0
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
-+++++|.||||... ..|.|.+.++|++|.+. +..++|+|..++..
T Consensus 8 ~~~~~~D~dG~l~~~----~~~~pga~e~L~~L~~~-G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG----NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEecccccccC----CccCccHHHHHHHHHHC-CCEEEEEeCCCCCh
Confidence 358999999999863 34678999999999964 78999998876653
No 199
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=88.15 E-value=0.69 Score=45.95 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=43.2
Q ss_pred ceEEEecCCCCCCCCCC-------C----------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHhhhh
Q 004512 585 SRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~-------~----------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~~ 640 (748)
.|+++||.|+||....- + ...+-+++.++|+.|.+ .+..++|+|+. ....++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 47999999999996431 0 12355899999999986 47899999998 777766665
Q ss_pred cC
Q 004512 641 SG 642 (748)
Q Consensus 641 ~~ 642 (748)
..
T Consensus 81 ~~ 82 (174)
T TIGR01685 81 GT 82 (174)
T ss_pred Hh
Confidence 43
No 200
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=88.02 E-value=4.8 Score=43.00 Aligned_cols=92 Identities=9% Similarity=0.133 Sum_probs=59.0
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
.++|++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.+ ++++++++. .+ .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~----~~l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNL----DELKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCH----HHHHHHHHh----CC-----CE
Confidence 367999999999988667777777653 23333 333443321 222 334444332 11 24
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
.++ + ..+++..+++.||+++.. -|.+.+|++++|.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 2 256899999999999884 3589999999976
No 201
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=87.73 E-value=1 Score=44.28 Aligned_cols=36 Identities=6% Similarity=0.006 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.+++.++|+.|.+ .+..++|+|+.....++..+..
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~ 108 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEG 108 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHH
Confidence 34567778888764 3688999999988877776654
No 202
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.31 E-value=34 Score=41.81 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=85.1
Q ss_pred CceEEEEeccccccCCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004512 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~ 400 (748)
+..+++.+-|+..-|--.+ .|.-++++. +.+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY-YMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHhccChhcCC
Confidence 5577888999999888777 666655553 3466532 235666555443333 2335667788888888886422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004512 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (748)
+-.|+|+. ...-.--..++.+|||-.-+| +.++| |||+++-|.. -.|.|.+|..-|+-.
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis------~ag~E--ASGTsnMK~~------------lNGaltlgtlDGanv 666 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQIS------TAGKE--ASGTGNMKFM------------LNGALTIGTLDGANV 666 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCC------CCCcc--ccCCchhhHH------------hcCceeeecccchhH
Confidence 34588875 445555567899999977666 45666 5665433221 136778887777654
Q ss_pred cc
Q 004512 481 SL 482 (748)
Q Consensus 481 ~l 482 (748)
++
T Consensus 667 Ei 668 (797)
T cd04300 667 EI 668 (797)
T ss_pred HH
Confidence 44
No 203
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=87.27 E-value=0.44 Score=47.07 Aligned_cols=58 Identities=16% Similarity=0.116 Sum_probs=39.1
Q ss_pred ceEEEecCCCCCCCCC----CCC---CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 585 SRLILLDYDGTVMPQT----SED---KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~----~~~---~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
-++++||+||||++-. +.. ..-+..=...++.|.+ .+..++|+|+++...+++.+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 4799999999999853 111 1111112234455554 37899999999999999888754
No 204
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.06 E-value=0.76 Score=47.81 Aligned_cols=50 Identities=22% Similarity=0.370 Sum_probs=38.2
Q ss_pred EEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEc---CCChhhHhhhhcC
Q 004512 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSG 642 (748)
Q Consensus 588 i~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~ 642 (748)
++||.||||.... .+-+.+.+.|+.|.+. +.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~----~~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH----KPIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC----ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHH
Confidence 5789999998743 2345788999998764 67889997 8999877766643
No 205
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=86.88 E-value=0.89 Score=48.52 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
+.+++.++|+.|.+. +..++|+|+.....++..+...
T Consensus 143 l~pg~~e~L~~L~~~-gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 143 LFPGVADLLAQLRSR-SLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred cCCCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 346788899999854 7899999999999888887643
No 206
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=86.72 E-value=18 Score=40.34 Aligned_cols=97 Identities=11% Similarity=0.061 Sum_probs=59.5
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcc----ccc
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL 482 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l 482 (748)
+.+.+++. .++..||++|.. -|.| +..|++++|. |+|+.-..+-. ..+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~---------------------P~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGV---------------------PMVAVPQGADQPMTARRI 330 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCC---------------------CEEecCCcccHHHHHHHH
Confidence 34677764 568899998854 4665 5689999976 34443222211 112
Q ss_pred ---CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHH
Q 004512 483 ---SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKS 533 (748)
Q Consensus 483 ---~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~ 533 (748)
..|+.++. .+.++++++|.++|+.+ +.+.+.++..+.+.. ......++.
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~ 385 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADE 385 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 12566654 46799999999999865 345555555555554 344444443
No 207
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=86.11 E-value=0.79 Score=46.54 Aligned_cols=35 Identities=17% Similarity=0.104 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
-+++.++|+.|.+. +..++|+||.....++..+..
T Consensus 84 ~~g~~~~l~~L~~~-g~~~~i~S~~~~~~~~~~l~~ 118 (214)
T PRK13288 84 YETVYETLKTLKKQ-GYKLGIVTTKMRDTVEMGLKL 118 (214)
T ss_pred CcCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHH
Confidence 35678889998864 789999999998888776653
No 208
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.89 E-value=0.094 Score=54.46 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=68.5
Q ss_pred cCceEEEecCCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh
Q 004512 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~-----------------------~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (748)
.++.+++||+|+|+....+ ..+.+-|.++++++.+.+. +..|++||||+...-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR-GVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC-CCeEEEEecCCchhHHHH
Confidence 4678999999999874211 0123446789999998864 899999999997743333
Q ss_pred hcCCCCceeeecCceEEeecCCCcceecccCCCcchHHHHHHHHHHHhccCCCeEEeecCcEEEEEcccCCcCchH
Q 004512 640 FSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715 (748)
Q Consensus 640 ~~~~~~l~l~aehG~~i~~~~~~~w~~~~~~~~~~w~~~v~~vl~~~~~~~~Gs~iE~K~~sl~~Hyr~adpe~g~ 715 (748)
...+...|+.+-.+..++..+.. .. ......|...+.. |+.+++-|..++.+-.-||..
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~~~--~~---~~~~~yK~~~r~~------------i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDKDP--SK---KSAVEYKSERRKE------------IEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEESST--SS---------SHHHHHH------------HHHTTEEEEEEEESSGGGCHC
T ss_pred HHHHHHcCCCccchhcccccccc--cc---ccccccchHHHHH------------HHHcCCcEEEEeCCCHHHhhc
Confidence 33333344544466666654321 10 0112233333222 234577888888888667754
No 209
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=85.31 E-value=36 Score=37.83 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=53.9
Q ss_pred hhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc--ccc------c--
Q 004512 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPS------L-- 482 (748)
Q Consensus 413 ~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~------l-- 482 (748)
.+++.++|+.||+++.=| =+++.-|..++|. |.|+=-+... .++ +
T Consensus 243 ~~dm~~~~~~ADLvIsRa----Ga~Ti~E~~a~g~---------------------P~IliP~p~~~~~~Q~~NA~~l~~ 297 (357)
T COG0707 243 IDDMAALLAAADLVISRA----GALTIAELLALGV---------------------PAILVPYPPGADGHQEYNAKFLEK 297 (357)
T ss_pred HhhHHHHHHhccEEEeCC----cccHHHHHHHhCC---------------------CEEEeCCCCCccchHHHHHHHHHh
Confidence 457999999999988654 2588899999976 2333222222 112 2
Q ss_pred -CCcEEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 004512 483 -SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEKHYKYI 522 (748)
Q Consensus 483 -~~ai~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V 522 (748)
..|+.+.-.+ .+.+++.|.++++.+ |+..+|....+.+
T Consensus 298 ~gaa~~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~ 338 (357)
T COG0707 298 AGAALVIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKL 338 (357)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhc
Confidence 1366666555 889999999999874 4444444443333
No 210
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=85.15 E-value=0.38 Score=48.22 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChh-----------hHhhhhcCC
Q 004512 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKD-----------SLGNWFSGV 643 (748)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~-----------~L~~~~~~~ 643 (748)
.|-+++.++|++|.+. +..+++||+|+.. .|+++|+.+
T Consensus 73 ~p~~gA~e~l~~L~~~-g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i 121 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDK-GHEIVIITARPPEFPDHSAEEKREWLERHFPFI 121 (191)
T ss_dssp -B-TTHHHHHHHHHTS-TTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH
T ss_pred CccHHHHHHHHHHHHc-CCcEEEEEecCccccchHHHHHHHHHHHHcCCC
Confidence 3567899999999964 5678888888754 477777654
No 211
>PRK14986 glycogen phosphorylase; Provisional
Probab=84.94 E-value=19 Score=43.96 Aligned_cols=136 Identities=11% Similarity=0.071 Sum_probs=85.6
Q ss_pred CceEEEEeccccccCCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004512 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~ 400 (748)
+-.+++.+-|+..-|--.+ .|..++++. ..+|+.. ..+++|..|-...++ ..-.++-+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY-YMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766663 4566532 235666655444333 3335667788888887875422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004512 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (748)
.-.|+|+. ...-.--..++.+|||-.-+|. .++| |||+++-|.. -.|+|-+|..-|+-.
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~E--ASGTsnMK~a------------lNGaLtlgtlDG~nv 679 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTE--ASGTSNMKFA------------LNGALTIGTLDGANV 679 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCcc--ccCcchhhHH------------hcCceeeeccCCchh
Confidence 33588875 4555666678999999887774 4566 5555432221 136788887777655
Q ss_pred cc
Q 004512 481 SL 482 (748)
Q Consensus 481 ~l 482 (748)
++
T Consensus 680 Ei 681 (815)
T PRK14986 680 EM 681 (815)
T ss_pred HH
Confidence 44
No 212
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=83.76 E-value=1.4 Score=44.93 Aligned_cols=34 Identities=12% Similarity=-0.092 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+++.++|+.|.+. +..++|+||.....++..+..
T Consensus 95 ~g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~ 128 (222)
T PRK10826 95 PGVREALALCKAQ-GLKIGLASASPLHMLEAVLTM 128 (222)
T ss_pred CCHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHh
Confidence 4567777777754 789999999998887777653
No 213
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=82.68 E-value=1.6 Score=45.45 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHhc-CCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCN-DPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~-d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+.+++.++++.+++ ..+..++|+|.=.--.++.++..
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 56788899999864 34789999999998899999865
No 214
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=81.99 E-value=32 Score=38.74 Aligned_cols=34 Identities=15% Similarity=0.031 Sum_probs=30.5
Q ss_pred hhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
-++-.+-+.|...|+||++|+.|.+|.|..+.|.
T Consensus 492 lDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGi 525 (692)
T KOG3742|consen 492 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI 525 (692)
T ss_pred CCHHHHhccccccccccccCCCCCCchheEEecc
Confidence 3667788999999999999999999999999865
No 215
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=81.17 E-value=15 Score=40.01 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=60.4
Q ss_pred HHHHHHc---CCceEEEEecc--ccccCCHH---HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHH
Q 004512 317 KELKEKF---DGKIVILGVDD--MDLFKGIS---LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRI 388 (748)
Q Consensus 317 ~~lr~~~---~~~~vil~VdR--ld~~KGi~---~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~l 388 (748)
.++..++ +...+.+-||- =.+.=+-. .++..+..+.+.++ .+ ++ |. +||-..+ +..+.+.++
T Consensus 135 ~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~---~~~~~L~~~ 204 (311)
T PF06258_consen 135 AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPP---EAEAALREL 204 (311)
T ss_pred HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcH---HHHHHHHHh
Confidence 3344444 24455555553 22222333 67777788877765 22 43 33 3433333 233344443
Q ss_pred HHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 389 AEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 389 v~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
.+. ...+.++. .-+..=+.+++..||.++||. |..+|+ .||+++|.
T Consensus 205 ~~~---------~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~ 250 (311)
T PF06258_consen 205 LKD---------NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGK 250 (311)
T ss_pred hcC---------CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCC
Confidence 321 11243443 334455889999999999997 788877 59999875
No 216
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=80.94 E-value=2.2 Score=41.59 Aligned_cols=54 Identities=11% Similarity=0.330 Sum_probs=40.2
Q ss_pred EEEecCCCCCCCCC------CC--CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChh---hHhhhhc
Q 004512 587 LILLDYDGTVMPQT------SE--DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD---SLGNWFS 641 (748)
Q Consensus 587 li~lDyDGTL~p~~------~~--~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~---~L~~~~~ 641 (748)
+++.|+|||++... +. .....+.+.++.+++.++ +..+.=+|+|+.. ..+.|+.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~~Tr~~L~ 65 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQANRTRSWLA 65 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHHHHHHHHH
Confidence 47899999999753 11 124567899999999965 8899999999965 3455554
No 217
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=80.14 E-value=2.1 Score=44.14 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+-+++.++|+.|.+. +..++++|+.++..++..+..
T Consensus 87 ~~pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~ 122 (221)
T COG0637 87 PIPGVVELLEQLKAR-GIPLAVASSSPRRAAERVLAR 122 (221)
T ss_pred CCccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHH
Confidence 346788899998864 589999999998888777753
No 218
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=79.85 E-value=2.4 Score=43.49 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+-+.+.++|..|.+. +...+|+|+++...++..+..
T Consensus 90 ~~~gv~e~L~~L~~~-g~~l~i~T~k~~~~~~~~l~~ 125 (220)
T COG0546 90 LFPGVKELLAALKSA-GYKLGIVTNKPERELDILLKA 125 (220)
T ss_pred cCCCHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHH
Confidence 456778899999964 789999999999998888764
No 219
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=79.18 E-value=3.5 Score=42.14 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=46.4
Q ss_pred ccCceEEEecCCCCCCCCCCCC---------------------------------------------------CCCCHHH
Q 004512 582 KTNSRLILLDYDGTVMPQTSED---------------------------------------------------KRPSTEV 610 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~~---------------------------------------------------~~p~~~~ 610 (748)
.+.+.+++||||-|++...+.. -...|.+
T Consensus 10 ~~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgm 89 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGM 89 (256)
T ss_pred cCCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccH
Confidence 4578999999999999866421 0235788
Q ss_pred HHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 611 LSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 611 ~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
+++++.+++.+-..+.|||--.--++++|+..
T Consensus 90 v~lik~~ak~g~~eliIVSDaNsfFIe~~Lea 121 (256)
T KOG3120|consen 90 VRLIKSAAKLGCFELIIVSDANSFFIEEILEA 121 (256)
T ss_pred HHHHHHHHhCCCceEEEEecCchhHHHHHHHH
Confidence 88888888776668889998887788877653
No 220
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=79.16 E-value=1.5 Score=44.94 Aligned_cols=33 Identities=15% Similarity=0.041 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhh
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~ 639 (748)
..+.+.++++.|.+. +..|+||||-.....+..
T Consensus 78 l~~ga~elv~~lk~~-G~~v~iiSgg~~~lv~~i 110 (212)
T COG0560 78 LTPGAEELVAALKAA-GAKVVIISGGFTFLVEPI 110 (212)
T ss_pred CCccHHHHHHHHHHC-CCEEEEEcCChHHHHHHH
Confidence 457788888888864 899999999876544333
No 221
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=79.16 E-value=1.1e+02 Score=33.92 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=46.3
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCc----cccc
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC----SPSL 482 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l 482 (748)
+.+.++.. +++..||++| .+-|+ -+..|++++|. |+|+--+.+- +..+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~Gv---------------------P~v~~P~~~dQ~~~a~~~ 343 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGV---------------------PQLVVPFFGDQPFWAARV 343 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCC---------------------CEEeeCCCCCcHHHHHHH
Confidence 44566654 5678899999 45565 56689999976 3333333331 2222
Q ss_pred -C-C-cEEeCCC--CHHHHHHHHHHHhc
Q 004512 483 -S-G-AIRVNPW--NVDAVADAMDSALQ 505 (748)
Q Consensus 483 -~-~-ai~VnP~--d~~~~A~ai~~aL~ 505 (748)
. | |+.+++. +.+++++++.++|+
T Consensus 344 ~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 344 AELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 1 3 5666654 68999999999998
No 222
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=78.95 E-value=2.8 Score=41.44 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=33.6
Q ss_pred ceEEEecCCCCCCCCCC--C----------C----------CCCCHHHHHHHHHHhcCCCCcEEEEcCC-ChhhHhhhhc
Q 004512 585 SRLILLDYDGTVMPQTS--E----------D----------KRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWFS 641 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~--~----------~----------~~p~~~~~~~L~~L~~d~~~~V~IvSGR-~~~~L~~~~~ 641 (748)
.+|++||.|+||.|.-- . . ...-+++.++|+.|.. .+..++++|=- ..+..++.+.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 47999999999998541 0 0 1234788999999997 58999999943 3444555544
No 223
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=78.36 E-value=3.6 Score=41.63 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=43.1
Q ss_pred ccCceEEEecCCCCCCCCCCCC----CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 582 KTNSRLILLDYDGTVMPQTSED----KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~~----~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
+..+++|+||+||||+...+.. ...-|.+-+.|+.+.+ ...|+|-|..+...++..+.
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHH
Confidence 3567899999999999753211 1223688899999886 68999999988777666543
No 224
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=78.10 E-value=1.8 Score=41.71 Aligned_cols=55 Identities=18% Similarity=0.311 Sum_probs=37.7
Q ss_pred eEEEecCCCCCCCCCCCC----------------CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 586 RLILLDYDGTVMPQTSED----------------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~----------------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
++|+||.||||+...... ...-|.+.+.|+.|+. ...|+|.|..+....+..+..
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~ 71 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDA 71 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHh
Confidence 479999999999654221 1134688899999875 589999999998876666543
No 225
>PLN02940 riboflavin kinase
Probab=77.01 E-value=2.7 Score=47.05 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
+++.++|+.|.+. +..++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~~-g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKSH-GVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHHC-CCcEEEEeCCcHHHHHHHHH
Confidence 5566788888754 88999999999887766553
No 226
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=76.83 E-value=4.1 Score=44.44 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=32.0
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcC---CCCcEEEEc---CCChhhH
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCND---PKNAVFIVS---GRGKDSL 636 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d---~~~~V~IvS---GR~~~~L 636 (748)
+++||+||||..- ..+-+...++|+.|... .+..+.++| |++....
T Consensus 2 ~~ifD~DGvL~~g----~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~ 53 (321)
T TIGR01456 2 GFAFDIDGVLFRG----KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERAR 53 (321)
T ss_pred EEEEeCcCceECC----ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHH
Confidence 5899999999863 23467889999998864 145556555 5665543
No 227
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=76.63 E-value=13 Score=35.60 Aligned_cols=72 Identities=24% Similarity=0.274 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004512 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (748)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (748)
.-+.+...+++++ ++..|.||.|-.-+|..+. ..+.+++.++++..+|+. ||++.....+..+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~l----pv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFNL----PVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcCC----CEEEEcCccCHHHHHHHHHH
Confidence 3455666666665 3557889999876666665 667799999999999874 79999888887777766665
Q ss_pred Cc
Q 004512 423 AE 424 (748)
Q Consensus 423 AD 424 (748)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 44
No 228
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=75.16 E-value=34 Score=39.88 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=74.5
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004512 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (748)
Q Consensus 327 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~ 406 (748)
.|+++..+ +.|=.++.+.-.-++|+.-|+-. |++-+.+ +..+..+.+++++++- |. +...++|
T Consensus 431 vVf~c~~n--~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----Gv-~~eRL~f 493 (620)
T COG3914 431 VVFCCFNN--YFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----GV-DSERLRF 493 (620)
T ss_pred EEEEecCC--cccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----CC-Chhheee
Confidence 34444544 57888899999999999999864 6655532 3346677788887763 43 4445675
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
. .+.+.++-.|.|..||+++-|=-+-| .-++.|++..+.
T Consensus 494 ~-p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~v 532 (620)
T COG3914 494 L-PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMGV 532 (620)
T ss_pred c-CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhcC
Confidence 5 57888999999999999998876655 577889998853
No 229
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=74.52 E-value=4.1 Score=39.69 Aligned_cols=60 Identities=10% Similarity=0.114 Sum_probs=45.4
Q ss_pred ccCceEEEecCCCCCCCCCCCC--------------------------------CCCCHHHHHHHHHHhcCCCCcEEEEc
Q 004512 582 KTNSRLILLDYDGTVMPQTSED--------------------------------KRPSTEVLSILNDLCNDPKNAVFIVS 629 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~~--------------------------------~~p~~~~~~~L~~L~~d~~~~V~IvS 629 (748)
+.++..++||.|.||+...... ..+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 4578899999999999743110 0124789999999984 58999999
Q ss_pred CCChhhHhhhhcCC
Q 004512 630 GRGKDSLGNWFSGV 643 (748)
Q Consensus 630 GR~~~~L~~~~~~~ 643 (748)
.......+..+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999877776544
No 230
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=73.83 E-value=4.1 Score=43.37 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=34.6
Q ss_pred ceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
-..+++|.||||..- ..+-|++.+.|++|.+. +.+++++|-.+.
T Consensus 8 y~~~l~DlDGvl~~G----~~~ipga~e~l~~L~~~-g~~~iflTNn~~ 51 (269)
T COG0647 8 YDGFLFDLDGVLYRG----NEAIPGAAEALKRLKAA-GKPVIFLTNNST 51 (269)
T ss_pred cCEEEEcCcCceEeC----CccCchHHHHHHHHHHc-CCeEEEEeCCCC
Confidence 357999999999853 34567899999999975 788888876553
No 231
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.47 E-value=5.7 Score=38.79 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=41.9
Q ss_pred ceEEEecCCCCCCCCCCCCC---------------------CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 585 SRLILLDYDGTVMPQTSEDK---------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~~~~---------------------~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
+..++||.|+||+.-..... ..-|.+.+.|..|++ ...++|.|.-+....+..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 35799999999996431110 124789999999986 4899999998888777766543
No 232
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=72.53 E-value=1.6e+02 Score=35.73 Aligned_cols=133 Identities=11% Similarity=0.086 Sum_probs=74.1
Q ss_pred CceEEEEeccccccCCHHHH-H---HHHHHHHHhCCCCCC-ceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 004512 325 GKIVILGVDDMDLFKGISLK-F---LAMGQLLEQHPDLRG-KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~-l---~A~~~ll~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~ 399 (748)
+..+++.+-|+..-|--.+. | .-+.++ ++.|+..- .+++|..|-...++ ..-+++-+.|.++++.||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhhc
Confidence 45678899999999976663 3 334444 45665433 35566544322222 223456667777888887542222
Q ss_pred CCccEEEecCCCChhhHHHHHHhCcEEEecCCC--ccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004512 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVR--DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (748)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~--EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (748)
+.-.|+|+. ..+-.--..++.++||-.-+|.+ |.-|..-+-+|.- |.+.+|..-|
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N----------------------GaL~lstlDG 577 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN----------------------GALNLSTLDG 577 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT----------------------T-EEEEESST
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC----------------------CCeEEecccc
Confidence 233588775 56666667899999999999864 4444444444442 6788888888
Q ss_pred ccccc
Q 004512 478 CSPSL 482 (748)
Q Consensus 478 ~~~~l 482 (748)
+--++
T Consensus 578 ~niEi 582 (713)
T PF00343_consen 578 WNIEI 582 (713)
T ss_dssp CHHHH
T ss_pred hhHHH
Confidence 75554
No 233
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=71.93 E-value=3.9 Score=40.81 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=35.6
Q ss_pred ceEEEecCCCCCCCCCC-CC-----CCCCHHHHHHHHHHhcCCCCcEEEEcC
Q 004512 585 SRLILLDYDGTVMPQTS-ED-----KRPSTEVLSILNDLCNDPKNAVFIVSG 630 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~~-~~-----~~p~~~~~~~L~~L~~d~~~~V~IvSG 630 (748)
..+||+|=||||.-..+ .. -...+.++.+|.+|.+ .+..++|||-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 67999999999986554 21 1345789999999985 5899999996
No 234
>PRK11590 hypothetical protein; Provisional
Probab=71.59 E-value=2.1 Score=43.55 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=22.5
Q ss_pred HHHHHHH-HHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 608 TEVLSIL-NDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 608 ~~~~~~L-~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
|++.+.| +.|.+ .+..++|+|+.....++.++..
T Consensus 98 pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~ 132 (211)
T PRK11590 98 PVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFD 132 (211)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHH
Confidence 4455666 34543 3678889999888877766543
No 235
>PRK08238 hypothetical protein; Validated
Probab=70.79 E-value=8.9 Score=44.32 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
.+++.+.|+++.+ .+..++|+|+.....++.....+
T Consensus 74 ~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~l 109 (479)
T PRK08238 74 NEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHL 109 (479)
T ss_pred ChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 4789999999875 48899999999999888776543
No 236
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=68.25 E-value=8 Score=38.49 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
|...+..+...+ ....|+||||----.+...|..
T Consensus 76 p~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~ 109 (220)
T COG4359 76 PGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEG 109 (220)
T ss_pred ccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHh
Confidence 333444444443 4788999998887777777754
No 237
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=67.93 E-value=39 Score=36.66 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=65.5
Q ss_pred ceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ-ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 326 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
+..|+==-.=|++-.....|.++.+.+.. ++.++. .+.|+ + .++|.++|.+.+.++ ||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~---g--n~~Yi~~V~~~~~~l---F~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA---N--NQAYIEEVRQAGLAL---FGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC---C--CHHHHHHHHHHHHHh---cCcc---cE
Confidence 33333334578888888888887766432 232332 23332 1 145667777776654 6532 46
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCCC-ccCCchhh
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCVR-DGMNLVPY 440 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~-EGmnLv~~ 440 (748)
..++..++.+|+.++++.+|+.++.--| .|+|...+
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l 245 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL 245 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH
Confidence 7788999999999999999999987764 89987754
No 238
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=66.38 E-value=2.9e+02 Score=33.05 Aligned_cols=28 Identities=7% Similarity=0.357 Sum_probs=25.1
Q ss_pred HHHHHHhCcEEEecCCCccCCchhhhhhhhccC
Q 004512 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (748)
Q Consensus 416 l~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~ 448 (748)
-..++++||+++++| |-+.+|++.+|.+
T Consensus 482 ~~~~m~aaD~aLaaS-----GTaTLEaAL~g~P 509 (608)
T PRK01021 482 RYELMRECDCALAKC-----GTIVLETALNQTP 509 (608)
T ss_pred hHHHHHhcCeeeecC-----CHHHHHHHHhCCC
Confidence 468999999999999 8999999999763
No 239
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=64.95 E-value=42 Score=33.25 Aligned_cols=50 Identities=14% Similarity=0.077 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCC--CEEEEeCcchhhHHHHHHhhccCCeEEE
Q 004512 168 EWQAYLSANKVFADKVMEVINPDE--DYVWIHDYHLMVLPSFLRKRFHRVKVGF 219 (748)
Q Consensus 168 ~w~~Y~~vN~~fA~~i~~~~~~~~--DiVwvhDyhl~llp~~lr~~~~~~~ig~ 219 (748)
.|+.=..-=+..++++.+.-+.+. |+|.-| +-+.-+-+||+.+|+++++-
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~ 93 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIG 93 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEE
Confidence 344444444455555554433222 999999 88888889999999999864
No 240
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.67 E-value=19 Score=41.06 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=60.9
Q ss_pred ChHHHHHHhhccCceEEEecCCCCCCCCC-------CCC---C---CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhh
Q 004512 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT-------SED---K---RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (748)
Q Consensus 572 ~~~~i~~~y~~s~~rli~lDyDGTL~p~~-------~~~---~---~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~ 638 (748)
.+..++.+-....+++++||.|+||..-. .+. . .+-.+....+..|.. .+..++|+|=....+..+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 44566777677788999999999999633 111 1 122456677777775 589999999999999999
Q ss_pred hhcCCCCceeeecCceEE
Q 004512 639 WFSGVEKLGLSAEHGYFT 656 (748)
Q Consensus 639 ~~~~~~~l~l~aehG~~i 656 (748)
.|...|...|=-||=+.+
T Consensus 288 vF~khp~MiLkeedfa~~ 305 (574)
T COG3882 288 VFRKHPDMILKEEDFAVF 305 (574)
T ss_pred HHhhCCCeEeeHhhhhhh
Confidence 998778777655555444
No 241
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.19 E-value=34 Score=37.85 Aligned_cols=115 Identities=7% Similarity=0.020 Sum_probs=77.2
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCC---CccC---CchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCV---RDGM---NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~---~EGm---nLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (748)
+.+++.-.+.......|+.-|+.+.=+. -++. +.-..|+++|+ |++|.+-..+
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~---------------------~~liT~~~~~ 297 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG---------------------GFLITDYWKD 297 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC---------------------CccccccHHH
Confidence 4445433445777888888887764332 2333 88899999995 4666665555
Q ss_pred cccccC-CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHH
Q 004512 478 CSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLER 540 (748)
Q Consensus 478 ~~~~l~-~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l~~ 540 (748)
.---+. |--++--.|..++.+.+...+.-++ ||++..+.+++.|.. |+-..=+..++..+.+
T Consensus 298 ~e~~f~pgk~~iv~~d~kdl~~~~~yll~h~~-erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 298 LEKFFKPGKDIIVYQDSKDLKEKLKYLLNHPD-ERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHhcCCchheEEecCHHHHHHHHHHHhcCcc-hHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 443342 3233334689999999999999875 888888999888864 6656656666666654
No 242
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=62.63 E-value=4 Score=43.78 Aligned_cols=29 Identities=24% Similarity=0.368 Sum_probs=20.5
Q ss_pred ChHHHHHHhhccCceEEEecCCCCCCCCC
Q 004512 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT 600 (748)
Q Consensus 572 ~~~~i~~~y~~s~~rli~lDyDGTL~p~~ 600 (748)
+...+.++-...+-++|+||+||||++..
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVETE 55 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEccc
Confidence 34455555445556799999999999853
No 243
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=62.19 E-value=45 Score=40.42 Aligned_cols=130 Identities=11% Similarity=0.098 Sum_probs=85.6
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHhCC-CCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHP-DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~p 403 (748)
+..+++.+-|+..-|-..+.+.=..++...-- ++..++++|..|-...++ ..-.++-+.|.+.++.+|.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y-~~aK~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD-YAAKEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc-hHHHHHHHHHHHHHHhhcccc------e
Confidence 46788899999998887776666555554333 666677777655433333 223567778888888888742 4
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccccc
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (748)
|+|+. ..+-.--..++.+|||-..+|+ .++| |||+++.|.. -.|.+-+|..-|+-.++
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~------a~~E--ASGTsnMK~a------------lNGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPT------AGKE--ASGTSNMKAA------------LNGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCC------CCcc--ccCcCcchHH------------hcCCceeeccccHHHHH
Confidence 88775 3444445568899999877774 5677 5666543321 13678888888876554
No 244
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=62.13 E-value=4.1 Score=39.89 Aligned_cols=14 Identities=21% Similarity=0.695 Sum_probs=12.5
Q ss_pred eEEEecCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQ 599 (748)
Q Consensus 586 rli~lDyDGTL~p~ 599 (748)
++++||+||||++.
T Consensus 2 ~~iiFD~DGTL~ds 15 (185)
T TIGR02009 2 KAVIFDMDGVIVDT 15 (185)
T ss_pred CeEEEcCCCcccCC
Confidence 58999999999985
No 245
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=62.06 E-value=4.5 Score=39.88 Aligned_cols=15 Identities=27% Similarity=0.538 Sum_probs=13.0
Q ss_pred ceEEEecCCCCCCCC
Q 004512 585 SRLILLDYDGTVMPQ 599 (748)
Q Consensus 585 ~rli~lDyDGTL~p~ 599 (748)
-++++||+||||++.
T Consensus 5 ~~~viFD~DGTLiDs 19 (188)
T PRK10725 5 YAGLIFDMDGTILDT 19 (188)
T ss_pred ceEEEEcCCCcCccC
Confidence 468999999999984
No 246
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=60.77 E-value=6.6 Score=38.44 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=17.5
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCN 619 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~ 619 (748)
+|+||+||||+... +....+++++++
T Consensus 1 ~iiFD~DGTL~ds~-------~~~~~~~~~~~~ 26 (185)
T TIGR01990 1 AVIFDLDGVITDTA-------EYHYLAWKALAD 26 (185)
T ss_pred CeEEcCCCccccCh-------HHHHHHHHHHHH
Confidence 48999999999843 344445555554
No 247
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=58.95 E-value=6.1 Score=39.50 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=0.0
Q ss_pred EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 004512 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCN 619 (748)
Q Consensus 587 li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~ 619 (748)
+|+||+||||++ -.+....++++..+
T Consensus 2 ~viFD~DGTLiD-------s~~~~~~a~~~~~~ 27 (197)
T TIGR01548 2 ALVLDMDGVMAD-------VSQSYRRAIIDTVE 27 (197)
T ss_pred ceEEecCceEEe-------chHHHHHHHHHHHH
No 248
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=57.54 E-value=6.3 Score=40.27 Aligned_cols=33 Identities=12% Similarity=0.194 Sum_probs=23.8
Q ss_pred CHHHHHHHH-HHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 607 STEVLSILN-DLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 607 ~~~~~~~L~-~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
-|.+.+.|+ .|.+ .+..++|||+.....++.+.
T Consensus 96 ~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia 129 (210)
T TIGR01545 96 FPLVAERLRQYLES-SDADIWLITGSPQPLVEAVY 129 (210)
T ss_pred CccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHH
Confidence 356677774 5554 37899999998887777665
No 249
>PHA02597 30.2 hypothetical protein; Provisional
Probab=57.30 E-value=5 Score=40.06 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=13.0
Q ss_pred eEEEecCCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQT 600 (748)
Q Consensus 586 rli~lDyDGTL~p~~ 600 (748)
++++||+||||++..
T Consensus 3 k~viFDlDGTLiD~~ 17 (197)
T PHA02597 3 PTILTDVDGVLLSWQ 17 (197)
T ss_pred cEEEEecCCceEchh
Confidence 689999999999854
No 250
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=56.89 E-value=3.1e+02 Score=30.36 Aligned_cols=84 Identities=11% Similarity=-0.002 Sum_probs=50.6
Q ss_pred EEEEeccc-cccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEE
Q 004512 328 VILGVDDM-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (748)
Q Consensus 328 vil~VdRl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~ 406 (748)
.++.=+|- +-.+-++..++|.+++.+++ .++++.+.++ . +.+++...+ +.++.+
T Consensus 171 ~llPGSR~~Ei~~llP~~~~aa~~L~~~~------~~~~i~~a~~------~----~~i~~~~~~---------~~~~~~ 225 (347)
T PRK14089 171 AFMPGSRKSEIKRLMPIFKELAKKLEGKE------KILVVPSFFK------G----KDLKEIYGD---------ISEFEI 225 (347)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHHhhcC------cEEEEeCCCc------H----HHHHHHHhc---------CCCcEE
Confidence 34555664 44556677778888876543 2355444321 1 223332211 113343
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
+. +...+|+.||+++..| |-+-+|++.++.
T Consensus 226 ~~------~~~~~m~~aDlal~~S-----GT~TLE~al~g~ 255 (347)
T PRK14089 226 SY------DTHKALLEAEFAFICS-----GTATLEAALIGT 255 (347)
T ss_pred ec------cHHHHHHhhhHHHhcC-----cHHHHHHHHhCC
Confidence 42 3467899999999999 788899999976
No 251
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=56.55 E-value=8.3 Score=39.02 Aligned_cols=15 Identities=27% Similarity=0.592 Sum_probs=13.2
Q ss_pred eEEEecCCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQT 600 (748)
Q Consensus 586 rli~lDyDGTL~p~~ 600 (748)
++++||+||||+...
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 689999999999855
No 252
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=56.37 E-value=27 Score=37.23 Aligned_cols=56 Identities=14% Similarity=0.253 Sum_probs=42.4
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
...+|++|.|-||.........+++.+.+.|.+|.+. +..+++=|--+.+-...-+
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~-g~vLvLWSyG~~eHV~~sl 176 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ-GCVLVLWSYGNREHVRHSL 176 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc-CCEEEEecCCCHHHHHHHH
Confidence 4679999999999976655556789999999999975 5677776766666444443
No 253
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=55.80 E-value=6.3 Score=38.83 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=12.0
Q ss_pred EEEecCCCCCCCCC
Q 004512 587 LILLDYDGTVMPQT 600 (748)
Q Consensus 587 li~lDyDGTL~p~~ 600 (748)
+++||+||||++..
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 68999999999753
No 254
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=55.08 E-value=6.2 Score=40.62 Aligned_cols=34 Identities=9% Similarity=0.158 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
-+++.++|+.|.+. +..++|+|+.+...++..+.
T Consensus 95 ~~g~~e~L~~Lk~~-g~~~~i~Tn~~~~~~~~~l~ 128 (224)
T PRK14988 95 REDTVPFLEALKAS-GKRRILLTNAHPHNLAVKLE 128 (224)
T ss_pred CCCHHHHHHHHHhC-CCeEEEEeCcCHHHHHHHHH
Confidence 45677788888754 67899999887776665554
No 255
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=55.06 E-value=6.6 Score=40.74 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=13.3
Q ss_pred ceEEEecCCCCCCCC
Q 004512 585 SRLILLDYDGTVMPQ 599 (748)
Q Consensus 585 ~rli~lDyDGTL~p~ 599 (748)
-++|+||+||||++.
T Consensus 10 ~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 10 ISALTFDLDDTLYDN 24 (238)
T ss_pred ceeEEEcCcccccCC
Confidence 478999999999985
No 256
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=55.05 E-value=5.4 Score=39.93 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=12.8
Q ss_pred eEEEecCCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQT 600 (748)
Q Consensus 586 rli~lDyDGTL~p~~ 600 (748)
++++||+||||++..
T Consensus 1 k~viFDlDGTL~d~~ 15 (203)
T TIGR02252 1 KLITFDAVGTLLALK 15 (203)
T ss_pred CeEEEecCCceeeeC
Confidence 479999999999854
No 257
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=54.59 E-value=8.6 Score=37.37 Aligned_cols=14 Identities=21% Similarity=0.380 Sum_probs=11.9
Q ss_pred EEEecCCCCCCCCC
Q 004512 587 LILLDYDGTVMPQT 600 (748)
Q Consensus 587 li~lDyDGTL~p~~ 600 (748)
+|+||+||||++..
T Consensus 1 ~viFD~DGTL~D~~ 14 (175)
T TIGR01493 1 AMVFDVYGTLVDVH 14 (175)
T ss_pred CeEEecCCcCcccH
Confidence 48999999999854
No 258
>PRK11587 putative phosphatase; Provisional
Probab=54.50 E-value=6.6 Score=39.96 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 608 ~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
|++.++|+.|.+. +..++|+|+.+.......+
T Consensus 86 pg~~e~L~~L~~~-g~~~~ivTn~~~~~~~~~l 117 (218)
T PRK11587 86 PGAIALLNHLNKL-GIPWAIVTSGSVPVASARH 117 (218)
T ss_pred cCHHHHHHHHHHc-CCcEEEEcCCCchHHHHHH
Confidence 4566777777754 6788888888766554443
No 259
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=53.02 E-value=10 Score=40.31 Aligned_cols=14 Identities=43% Similarity=0.904 Sum_probs=12.6
Q ss_pred eEEEecCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQ 599 (748)
Q Consensus 586 rli~lDyDGTL~p~ 599 (748)
++++||+||||++.
T Consensus 14 k~viFDlDGTL~Ds 27 (272)
T PRK13223 14 RLVMFDLDGTLVDS 27 (272)
T ss_pred CEEEEcCCCccccC
Confidence 49999999999984
No 260
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=52.60 E-value=3.6e+02 Score=29.74 Aligned_cols=69 Identities=7% Similarity=0.134 Sum_probs=44.2
Q ss_pred hhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC-c--ccc------c--
Q 004512 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG-C--SPS------L-- 482 (748)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G-~--~~~------l-- 482 (748)
+++..+|+.||++|.-+ =+.+..|.++++. |.|+--+.. . .++ +
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g~---------------------P~I~iP~~~~~~~~~Q~~Na~~l~~ 298 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQK---------------------PMLLIPLSKFASRGDQILNAESFER 298 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcCC---------------------CEEEEcCCCCCCCchHHHHHHHHHH
Confidence 57899999999888653 2467789999976 233322221 1 112 2
Q ss_pred CC-cEEeCC--CCHHHHHHHHHHHhcCC
Q 004512 483 SG-AIRVNP--WNVDAVADAMDSALQME 507 (748)
Q Consensus 483 ~~-ai~VnP--~d~~~~A~ai~~aL~m~ 507 (748)
.| |..+.. .+++.+++++..+++++
T Consensus 299 ~g~~~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 299 QGYASVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred CCCEEEcchhcCCHHHHHHHHHHHHcCH
Confidence 13 444443 35789999999998764
No 261
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=52.07 E-value=7.5 Score=39.31 Aligned_cols=15 Identities=27% Similarity=0.552 Sum_probs=13.0
Q ss_pred eEEEecCCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQT 600 (748)
Q Consensus 586 rli~lDyDGTL~p~~ 600 (748)
++++||+||||++..
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 589999999999854
No 262
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=51.56 E-value=8 Score=40.30 Aligned_cols=15 Identities=20% Similarity=0.547 Sum_probs=0.0
Q ss_pred CceEEEecCCCCCCC
Q 004512 584 NSRLILLDYDGTVMP 598 (748)
Q Consensus 584 ~~rli~lDyDGTL~p 598 (748)
+-++|+||+||||+.
T Consensus 1 ~~k~viFD~DGTLiD 15 (253)
T TIGR01422 1 KIEAVIFDWAGTTVD 15 (253)
T ss_pred CceEEEEeCCCCeec
No 263
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=51.08 E-value=8.1 Score=40.73 Aligned_cols=13 Identities=23% Similarity=0.685 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++++||+||||++
T Consensus 5 k~vIFDlDGTLiD 17 (267)
T PRK13478 5 QAVIFDWAGTTVD 17 (267)
T ss_pred EEEEEcCCCCeec
No 264
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=50.62 E-value=7.8 Score=39.29 Aligned_cols=13 Identities=38% Similarity=0.733 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++++||+||||+.
T Consensus 7 ~~iiFD~DGTL~d 19 (226)
T PRK13222 7 RAVAFDLDGTLVD 19 (226)
T ss_pred cEEEEcCCccccc
No 265
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=50.57 E-value=2.5e+02 Score=28.89 Aligned_cols=46 Identities=28% Similarity=0.351 Sum_probs=26.9
Q ss_pred eEEEeCCCCcccccC--C---cEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 004512 469 VIIVSEFIGCSPSLS--G---AIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (748)
Q Consensus 469 ~lV~Se~~G~~~~l~--~---ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (748)
|+|.-|-+|+.--+. | .+=|+|.+--++|.||+--+ +|.+.|.++.
T Consensus 187 Pii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~a 237 (259)
T KOG2884|consen 187 PIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERA 237 (259)
T ss_pred ceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHH
Confidence 566666555443332 1 35688888788888877433 3555555543
No 266
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=50.43 E-value=7.9 Score=39.85 Aligned_cols=34 Identities=15% Similarity=-0.049 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
-+++.++|+.|.+. +..++|+|+.+...++..+.
T Consensus 97 ~pg~~~~L~~L~~~-g~~l~i~Tn~~~~~~~~~l~ 130 (229)
T PRK13226 97 FDGVEGMLQRLECA-GCVWGIVTNKPEYLARLILP 130 (229)
T ss_pred CCCHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHH
Confidence 34566788888754 67899999998877666554
No 267
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=50.32 E-value=2.1e+02 Score=32.38 Aligned_cols=98 Identities=10% Similarity=0.098 Sum_probs=61.3
Q ss_pred cCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc------
Q 004512 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS------ 481 (748)
Q Consensus 408 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------ 481 (748)
...+|+.+ ++..||+++.. -|+|.+ .|++..|. |+|+ +..+.++
T Consensus 289 ~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv---------------------P~vv--~P~~~DQ~~nA~r 338 (406)
T COG1819 289 ADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV---------------------PLVV--IPDGADQPLNAER 338 (406)
T ss_pred ecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC---------------------CEEE--ecCCcchhHHHHH
Confidence 34566554 88999999864 588876 58999875 3333 1222333
Q ss_pred ---cCCcE--EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004512 482 ---LSGAI--RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (748)
Q Consensus 482 ---l~~ai--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 537 (748)
+.-|+ ..++++.+.++++++++|+++. -+++.+++++...+++...=+...+.+
T Consensus 339 ve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 339 VEELGAGIALPFEELTEERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHcCCceecCcccCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 22244 4458999999999999999653 344455666666666554433333333
No 268
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=49.90 E-value=8.4 Score=40.76 Aligned_cols=13 Identities=15% Similarity=0.580 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++++||+||||+.
T Consensus 25 k~vIFDlDGTLvD 37 (260)
T PLN03243 25 LGVVLEWEGVIVE 37 (260)
T ss_pred eEEEEeCCCceeC
No 269
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=49.78 E-value=9.4 Score=39.88 Aligned_cols=16 Identities=31% Similarity=0.490 Sum_probs=0.0
Q ss_pred cCceEEEecCCCCCCC
Q 004512 583 TNSRLILLDYDGTVMP 598 (748)
Q Consensus 583 s~~rli~lDyDGTL~p 598 (748)
++-++|+||+||||+.
T Consensus 20 ~~~k~viFDlDGTLiD 35 (248)
T PLN02770 20 APLEAVLFDVDGTLCD 35 (248)
T ss_pred CccCEEEEcCCCccCc
No 270
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=48.82 E-value=9.5 Score=38.72 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=13.5
Q ss_pred ceEEEecCCCCCCCCC
Q 004512 585 SRLILLDYDGTVMPQT 600 (748)
Q Consensus 585 ~rli~lDyDGTL~p~~ 600 (748)
-++++||+||||++..
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 4689999999999843
No 271
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=48.71 E-value=20 Score=42.24 Aligned_cols=65 Identities=8% Similarity=0.150 Sum_probs=51.5
Q ss_pred HHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCC-CcEEEEcCCChhhHhhhhcCC
Q 004512 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 578 ~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~-~~V~IvSGR~~~~L~~~~~~~ 643 (748)
+.+.....+.+++..||++...-.....+.+++.+.|++|.+. + ..++|+||......++....+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~-g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA-GGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc-CCCeEEEEeCCCHHHHHHHHHHh
Confidence 3445556788999999988775544556889999999999864 6 899999999999888877543
No 272
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=48.69 E-value=28 Score=32.11 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=28.9
Q ss_pred HHHHHhCCCCCEEEEeCcch-hhHHHHHHhhccCCeEEEEecC
Q 004512 182 KVMEVINPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHS 223 (748)
Q Consensus 182 ~i~~~~~~~~DiVwvhDyhl-~llp~~lr~~~~~~~ig~flH~ 223 (748)
++++..+| |+||+|+... .+++.++++.....|+.++.|-
T Consensus 68 k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 68 KIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 45555565 8999999875 5666666665544899999993
No 273
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=48.66 E-value=8.1 Score=36.69 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=0.0
Q ss_pred EEEecCCCCCCC
Q 004512 587 LILLDYDGTVMP 598 (748)
Q Consensus 587 li~lDyDGTL~p 598 (748)
+|+||+||||++
T Consensus 1 ~iifD~DGTL~d 12 (154)
T TIGR01549 1 AILFDIDGTLVD 12 (154)
T ss_pred CeEecCCCcccc
No 274
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=48.32 E-value=8.7 Score=38.95 Aligned_cols=13 Identities=38% Similarity=0.690 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++|+||+||||+.
T Consensus 2 k~iiFD~DGTL~d 14 (220)
T TIGR03351 2 SLVVLDMAGTTVD 14 (220)
T ss_pred cEEEEecCCCeec
No 275
>PRK09449 dUMP phosphatase; Provisional
Probab=47.56 E-value=9.5 Score=38.79 Aligned_cols=13 Identities=38% Similarity=0.519 Sum_probs=11.8
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++|+||+||||++
T Consensus 4 k~iiFDlDGTLid 16 (224)
T PRK09449 4 DWILFDADETLFH 16 (224)
T ss_pred cEEEEcCCCchhc
Confidence 6899999999995
No 276
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=46.74 E-value=46 Score=29.93 Aligned_cols=29 Identities=14% Similarity=0.315 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEecCCCCC
Q 004512 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSS 374 (748)
Q Consensus 342 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~ 374 (748)
..|...++++++.+|+.+ +|.||..+..+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~D 77 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHD 77 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcC
Confidence 588899999999999988 77788765444
No 277
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=46.36 E-value=2.5e+02 Score=30.00 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=23.6
Q ss_pred CEEEEeCcchhhHHHHHHhhccCCeEEEEec
Q 004512 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLH 222 (748)
Q Consensus 192 DiVwvhDyhl~llp~~lr~~~~~~~ig~flH 222 (748)
|++.--......+..+|++++.+.+++..+|
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~ 102 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD 102 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC
Confidence 6777788888899999999988765554443
No 278
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=44.47 E-value=12 Score=37.35 Aligned_cols=13 Identities=23% Similarity=0.531 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++|+||+||||++
T Consensus 2 k~viFD~dgTLiD 14 (198)
T TIGR01428 2 KALVFDVYGTLFD 14 (198)
T ss_pred cEEEEeCCCcCcc
No 279
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=43.78 E-value=70 Score=33.28 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=41.3
Q ss_pred CChHHHHHHhhccC-ceEEEecC--CCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHhhhhc
Q 004512 571 LGMHHIASAYNKTN-SRLILLDY--DGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWFS 641 (748)
Q Consensus 571 l~~~~i~~~y~~s~-~rli~lDy--DGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~~~ 641 (748)
.+..++++.+.... +.+|++|+ |||+.. |+-+++..+.+.. ..-++++| |+.+++.+.+.
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G-------~~~~li~~l~~~~----~ipvi~~GGi~s~edi~~l~~ 212 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG-------PNFELTGQLVKAT----TIPVIASGGIRHQQDIQRLAS 212 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCc-------cCHHHHHHHHHhC----CCCEEEeCCCCCHHHHHHHHH
Confidence 45566677776654 78999998 789765 4455555554433 23478888 88889998884
No 280
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=43.52 E-value=11 Score=38.31 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=28.3
Q ss_pred CCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 605 ~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
.+.|++.++|+.|.+. ..++||||-....++.++..
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~ 103 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQ 103 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHH
Confidence 3567888899998864 49999999998877776554
No 281
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=43.47 E-value=1.4e+02 Score=31.80 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCcc
Q 004512 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~p 403 (748)
.++.|++++|-.+.. ..+++ ++..|+++ ++.+|... .+. +-+ +
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~----l~~~~~~~----~~v~g~~~----~~~----------------~~~-----n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEA----LKALPDYQ----FIVFGPNA----ADP----------------RPG-----N 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHH----HHhCCCCe----EEEEcCCc----ccc----------------cCC-----C
Confidence 457899999998777 33333 44466665 55554220 000 001 3
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
|.+. ..+..++..++..||++|-.+ |+|. ..|++++|.
T Consensus 234 i~~~--~~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g~ 271 (318)
T PF13528_consen 234 IHVR--PFSTPDFAELMAAADLVISKG---GYTT-ISEALALGK 271 (318)
T ss_pred EEEe--ecChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcCC
Confidence 5533 344578999999999998765 6653 469999976
No 282
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=43.37 E-value=11 Score=36.93 Aligned_cols=28 Identities=21% Similarity=0.316 Sum_probs=18.3
Q ss_pred HHHHHHhcCCCCcEEEEcCCChhhHhhhh
Q 004512 612 SILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (748)
Q Consensus 612 ~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 640 (748)
+.|+.+.+. +..|+|+||-....++...
T Consensus 96 e~i~~~~~~-~~~v~IvS~~~~~~i~~~~ 123 (192)
T PF12710_consen 96 ELIRELKDN-GIKVVIVSGSPDEIIEPIA 123 (192)
T ss_dssp HHHHHHHHT-TSEEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHC-CCEEEEECCCcHHHHHHHH
Confidence 555555433 6778888888776666664
No 283
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=42.60 E-value=4e+02 Score=27.50 Aligned_cols=115 Identities=23% Similarity=0.377 Sum_probs=65.9
Q ss_pred CCchhHhhcCcchHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHhCccccccCceeEEEecCeEEEEEEeeccCCccccc
Q 004512 225 FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (748)
Q Consensus 225 fPs~e~fr~lp~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~ 304 (748)
||.+++||.+. +..|++-|-.-|-|-|.|+.-+-|=+.. .|+-.+- --.+.++| |+..+.+.
T Consensus 33 fpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk~------------~gy~evi----iQ~lhiIp-G~EyEklv 94 (265)
T COG4822 33 FPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLKD------------QGYEEVI----IQPLHIIP-GIEYEKLV 94 (265)
T ss_pred CccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHHH------------ccchhee----eeeeeecC-chHHHHHH
Confidence 78888888764 4567888888899999999776554431 1110010 11445555 77766543
Q ss_pred ccccCchhHHHHHHHHHHcCCceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCC
Q 004512 305 SIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (748)
Q Consensus 305 ~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (748)
. .++.++..| +.+.+|.-=|.+.-..... ++.+..+.|-++.+=.+|..|-.+
T Consensus 95 r---------~V~~~~~dF--~~lkig~PlLy~k~DYe~~---v~aik~~~ppl~k~e~~vlmgHGt 147 (265)
T COG4822 95 R---------EVNKYSNDF--KRLKIGRPLLYYKNDYEIC---VEAIKDQIPPLNKDEILVLMGHGT 147 (265)
T ss_pred H---------HHHHHhhhh--heeecCCceeechhhHHHH---HHHHHHhcCCcCcCeEEEEEecCC
Confidence 2 345555555 2333333334444334444 444556789777665566666443
No 284
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=42.56 E-value=13 Score=37.51 Aligned_cols=14 Identities=21% Similarity=0.911 Sum_probs=12.3
Q ss_pred eEEEecCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQ 599 (748)
Q Consensus 586 rli~lDyDGTL~p~ 599 (748)
++++||+||||++.
T Consensus 3 k~viFDldGtL~d~ 16 (211)
T TIGR02247 3 KAVIFDFGGVLLPS 16 (211)
T ss_pred eEEEEecCCceecC
Confidence 47999999999974
No 285
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=42.52 E-value=10 Score=38.03 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 607 ~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
.+++.++|++|.+. +..++|+||.+...+...+..
T Consensus 77 ~~g~~~~L~~L~~~-g~~~~i~Sn~~~~~~~~~l~~ 111 (205)
T TIGR01454 77 FPGVPELLAELRAD-GVGTAIATGKSGPRARSLLEA 111 (205)
T ss_pred CCCHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHH
Confidence 45677888888764 678999999888877766653
No 286
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=41.96 E-value=13 Score=37.03 Aligned_cols=15 Identities=33% Similarity=0.784 Sum_probs=0.0
Q ss_pred EEEecCCCCCCCCCC
Q 004512 587 LILLDYDGTVMPQTS 601 (748)
Q Consensus 587 li~lDyDGTL~p~~~ 601 (748)
+.++|+||||++..+
T Consensus 1 ~a~FD~DgTL~~~~s 15 (202)
T TIGR01490 1 LAFFDFDGTLTAKDT 15 (202)
T ss_pred CeEEccCCCCCCCch
No 287
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=41.64 E-value=31 Score=40.76 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=48.8
Q ss_pred ccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
+...+.++++.||+++..-.....+.+++.+.|++|.+. +..++|+||......+.....+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~-Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR-GIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHc
Confidence 345688999999998875444456788999999999865 7899999999999888877643
No 288
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=41.34 E-value=11 Score=37.80 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=0.0
Q ss_pred EEecCCCCCCC
Q 004512 588 ILLDYDGTVMP 598 (748)
Q Consensus 588 i~lDyDGTL~p 598 (748)
++||+||||++
T Consensus 1 viFD~DGTL~D 11 (213)
T TIGR01449 1 VLFDLDGTLVD 11 (213)
T ss_pred CeecCCCcccc
No 289
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=41.31 E-value=1.3e+02 Score=28.25 Aligned_cols=71 Identities=20% Similarity=0.290 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHh
Q 004512 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (748)
Q Consensus 343 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 422 (748)
..+.++..+.+++. +..++||.|-..+|.. .+....+++.++++..+|+. ||.++....+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFGV----PVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHH
Confidence 44677777777764 2366689888766544 34556788888888877764 79999888888777777765
Q ss_pred C
Q 004512 423 A 423 (748)
Q Consensus 423 A 423 (748)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 290
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=39.93 E-value=3.1e+02 Score=30.45 Aligned_cols=157 Identities=15% Similarity=0.138 Sum_probs=104.8
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc-ccCCCCCcc
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL-NFGKPGYEP 403 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~-~~g~~~~~p 403 (748)
++++-++=--++-.|.-..=+.+.|+.-+..|+.- ..+.|++.-. .++. .+...++.+++. +.|.
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v---~~~~V~Nt~~--~ke~----~~F~~f~~~ldlvr~gk----- 254 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAV---EHVYVTNTYH--LKEH----PTFVNFANSLDLVRDGK----- 254 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhc---ceEEEecchh--hhcC----HHHHHHHHhhHHhhcCe-----
Confidence 45666666666777776677788888888899874 4566676432 1222 233444455543 3343
Q ss_pred EEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccccC
Q 004512 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (748)
Q Consensus 404 V~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (748)
--+.+..+..+..+=| +|++|.--.--|+|-..+|++..|= |||- -|+.|.
T Consensus 255 -asfegR~~~p~fla~~--tD~VvSHqWeN~lNYlY~daLyggY---------------------PLVH-----NS~~l~ 305 (364)
T PF10933_consen 255 -ASFEGRFDFPDFLAQH--TDAVVSHQWENPLNYLYYDALYGGY---------------------PLVH-----NSPLLK 305 (364)
T ss_pred -eEEeeecChHHHHHhC--CCEEEeccccchhhHHHHHHHhcCC---------------------Cccc-----Ccchhc
Confidence 2245555555555555 6998888888999999999988642 5654 344553
Q ss_pred -CcEEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 004512 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (748)
Q Consensus 484 -~ai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 524 (748)
-|+.-+-+|..+=|+++.+|+..-+.....-.++.++++.+
T Consensus 306 d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 306 DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR 347 (364)
T ss_pred ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 47888889999999999999987765555555555655544
No 291
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=38.48 E-value=13 Score=36.11 Aligned_cols=13 Identities=38% Similarity=0.705 Sum_probs=11.2
Q ss_pred EEEecCCCCCCCC
Q 004512 587 LILLDYDGTVMPQ 599 (748)
Q Consensus 587 li~lDyDGTL~p~ 599 (748)
+++||+||||++.
T Consensus 1 ~vlFDlDgtLv~~ 13 (183)
T TIGR01509 1 AILFDLDGVLVDT 13 (183)
T ss_pred CeeeccCCceech
Confidence 4789999999985
No 292
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.61 E-value=47 Score=33.02 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=47.8
Q ss_pred cccCChHHHHHHhhccCceEEEecCCCCCCCCCC-----------C-------------------CCCCCHHHHHHHHHH
Q 004512 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-----------E-------------------DKRPSTEVLSILNDL 617 (748)
Q Consensus 568 f~~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~-----------~-------------------~~~p~~~~~~~L~~L 617 (748)
..-.++.+|.+....-+.-.+-||+|-|+.=..| . .-..+.++...|-.+
T Consensus 46 ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~M 125 (237)
T COG3700 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHH
Confidence 3346788899888877788888999999874221 0 112345555555444
Q ss_pred hcCCCCcEEEEcCCChhhHh
Q 004512 618 CNDPKNAVFIVSGRGKDSLG 637 (748)
Q Consensus 618 ~~d~~~~V~IvSGR~~~~L~ 637 (748)
....+..++.+|||+.-..+
T Consensus 126 Hq~RGD~i~FvTGRt~gk~d 145 (237)
T COG3700 126 HQRRGDAIYFVTGRTPGKTD 145 (237)
T ss_pred HHhcCCeEEEEecCCCCccc
Confidence 54568899999999976433
No 293
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=36.86 E-value=20 Score=36.31 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCCh----hhHhhh-h-cCCCCceeeecCc
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGK----DSLGNW-F-SGVEKLGLSAEHG 653 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~----~~L~~~-~-~~~~~l~l~aehG 653 (748)
+.+++++.|++|... ..++|+|-=.. ..|.+. + ..+..+..+.+.|
T Consensus 100 ~~~~~~~~L~~l~~~--~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g 151 (229)
T COG1011 100 DYPEALEALKELGKK--YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVG 151 (229)
T ss_pred cChhHHHHHHHHHhh--ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccc
Confidence 346677777777753 67888887332 223222 1 1234566666666
No 294
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=36.76 E-value=59 Score=35.14 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=44.4
Q ss_pred hhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcccc------c---CC
Q 004512 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS------L---SG 484 (748)
Q Consensus 414 ~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l---~~ 484 (748)
+++.++|..||++|..+ |++ +..|++++|. |+|+.-+.|-.++ + .-
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~---------------------P~l~ip~~~~~eQ~~na~~l~~~g~ 293 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLGK---------------------PLIVIPDLGQFEQGNNAVKLEDLGC 293 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCC---------------------CEEEEcCCCcccHHHHHHHHHHCCC
Confidence 78999999999999876 555 5789999976 4555445453333 2 12
Q ss_pred cEEeCCCCHHHHHHHHHHHhcCC
Q 004512 485 AIRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 485 ai~VnP~d~~~~A~ai~~aL~m~ 507 (748)
|+.++..+. ++.+++...++++
T Consensus 294 ~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 294 GIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred EEEcChhhH-HHHHHHHhccccc
Confidence 667776666 4444555444443
No 295
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=36.71 E-value=19 Score=36.00 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCCCC
Q 004512 586 RLILLDYDGTVMPQT 600 (748)
Q Consensus 586 rli~lDyDGTL~p~~ 600 (748)
++++||+||||++..
T Consensus 1 ~~viFDldgvL~d~~ 15 (199)
T PRK09456 1 MLYIFDLGNVIVDID 15 (199)
T ss_pred CEEEEeCCCccccCc
No 296
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=36.44 E-value=81 Score=32.68 Aligned_cols=61 Identities=16% Similarity=0.305 Sum_probs=39.2
Q ss_pred ChHHHHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHhhhhc
Q 004512 572 GMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWFS 641 (748)
Q Consensus 572 ~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~~~ 641 (748)
+..++++.|...-+.+++.|.|||+.... + -.+.++++++..... +.++| |+.+++++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~-----~---n~~~i~~i~~~~~~p-v~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP-----K---NLDVVKNIIRETGLK-VQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc-----c---hHHHHHHHHhhCCCC-EEEcCCCCCHHHHHHHHH
Confidence 66777888876567799999999986532 2 244555555433333 34444 66777877764
No 297
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=35.55 E-value=51 Score=40.37 Aligned_cols=66 Identities=6% Similarity=0.073 Sum_probs=52.2
Q ss_pred HHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 577 ~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
.+.+.....+.+++=+||+++..-.....+-+++.+.|++|.+. +..++++||......+.....+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~-gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL-GIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHc
Confidence 34566667788999999998865444455778999999999864 7899999999999888887653
No 298
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=34.93 E-value=29 Score=38.48 Aligned_cols=82 Identities=28% Similarity=0.314 Sum_probs=51.6
Q ss_pred cCceEEEecCCCCCCCCCCCCC---------CCCHHHHHHHHHHhcCCCCcEEEEcCCC-----hh-------hHhhhhc
Q 004512 583 TNSRLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSGRG-----KD-------SLGNWFS 641 (748)
Q Consensus 583 s~~rli~lDyDGTL~p~~~~~~---------~p~~~~~~~L~~L~~d~~~~V~IvSGR~-----~~-------~L~~~~~ 641 (748)
-..+.+.|||||||+...+... ...++.-+-|.+|..+ +..++|-|-.. .- -++..++
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~-g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~a 151 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD-GIKLFIFTNQNGIARGKLELEEFKKKIKAIVA 151 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC-CeEEEEEecccccccCcchHHHHHHHHHHHHH
Confidence 4578999999999998664221 1235677788888865 78888877432 21 1223333
Q ss_pred C--CCCceeeecCceEEeecCCCcce
Q 004512 642 G--VEKLGLSAEHGYFTRWSKNSAWE 665 (748)
Q Consensus 642 ~--~~~l~l~aehG~~i~~~~~~~w~ 665 (748)
. +|-..++|.++-.+|.|--.-|+
T Consensus 152 nl~vPi~~~~A~~~~~yRKP~tGMwe 177 (422)
T KOG2134|consen 152 NLGVPIQLLAAIIKGKYRKPSTGMWE 177 (422)
T ss_pred hcCCceEEeeeccCCcccCcchhHHH
Confidence 2 35556777777777766433454
No 299
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=34.58 E-value=2e+02 Score=27.31 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=47.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhC
Q 004512 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (748)
Q Consensus 345 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 423 (748)
+..+.++.++++ +..++||.|-..+|.. .+....+++.++++..+++. ||++..+..+..+-...|..+
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~~----~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFGL----PVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhCC----CEEEEcCCcCHHHHHHHHHHc
Confidence 556666666653 3467789887655543 34456777888888777753 799999888887777776554
No 300
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=34.37 E-value=15 Score=34.84 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
|.+++.++|++|.+. +..++|+|+.+...++..+..
T Consensus 78 ~~~~~~~~L~~l~~~-~~~~~i~Sn~~~~~~~~~l~~ 113 (176)
T PF13419_consen 78 PYPGVRELLERLKAK-GIPLVIVSNGSRERIERVLER 113 (176)
T ss_dssp ESTTHHHHHHHHHHT-TSEEEEEESSEHHHHHHHHHH
T ss_pred hhhhhhhhhhhcccc-cceeEEeecCCcccccccccc
Confidence 567888999999854 899999999998877777654
No 301
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=31.65 E-value=2.3e+02 Score=33.17 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=65.3
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHH-hCCCCCCc--eEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 328 VILGVDDMDLFKGISLKFLAMGQLLE-QHPDLRGK--VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 328 vil~VdRld~~KGi~~~l~A~~~ll~-~~P~~~~~--vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
=++++.+--.-|-+..+|-|+.++.. +...-+++ .+|| -.|+| ||..++.+.+.++....+ ...+
T Consensus 130 D~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PTR-------ELA~QV~~~~~~~~~~~~---~~~~ 197 (519)
T KOG0331|consen 130 DLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPTR-------ELAVQVQAEAREFGKSLR---LRST 197 (519)
T ss_pred ceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCcH-------HHHHHHHHHHHHHcCCCC---ccEE
Confidence 37889999999999999999999987 34433443 4554 45764 677777777777655443 2223
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCCC
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCVR 432 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~ 432 (748)
.+++|.--..++..+=+.+||++-|+-|
T Consensus 198 cvyGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 198 CVYGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred EEeCCCCccHHHHHHhcCCcEEEeCChH
Confidence 3344444477899999999999999843
No 302
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=31.45 E-value=70 Score=35.60 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=45.0
Q ss_pred Ccccc----cCChHHHHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 565 GPEFR----KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 565 ~~~f~----~l~~~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
.|+|. -|+..+|..--+..+=+|+-||=|+||-+..... .++..++..|-+|-+. +..|.|||.=.+..
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG~sl-~~d~pvi~~ii~LL~~-gv~VgIVTAAGY~~ 195 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDGASL-EPDNPVIPRIIKLLRR-GVKVGIVTAAGYPG 195 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCCCCC-CCCchHHHHHHHHHhc-CCeEEEEeCCCCCC
Confidence 45554 2455555554444466899999999999876322 2444566555555543 78999999877654
No 303
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=31.19 E-value=57 Score=39.42 Aligned_cols=69 Identities=4% Similarity=0.016 Sum_probs=53.1
Q ss_pred HHHHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcCC
Q 004512 574 HHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 574 ~~i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 643 (748)
++..+.+.+...+.+++-+|+++...-.....+.+++.+.+++|.+. +..++++||.........-..+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~-Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM-GIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHc
Confidence 34445566666788888899988865545556778999999998864 8999999999998887776543
No 304
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=30.73 E-value=23 Score=39.67 Aligned_cols=13 Identities=8% Similarity=0.478 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
+.++||+||||++
T Consensus 132 ~~VIFDlDGTLID 144 (381)
T PLN02575 132 LGAIFEWEGVIIE 144 (381)
T ss_pred CEEEEcCcCccee
No 305
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=30.64 E-value=5.2e+02 Score=28.18 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=49.5
Q ss_pred CCceEEEEeccccccCCHHH-HHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 324 ~~~~vil~VdRld~~KGi~~-~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
.++.+++..|--.+.|--+. .+.++.+.|.+. .++ ++++|+|.- .+. +..+++++.++. .
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~~----vvl~ggp~e---~e~----~~~~~i~~~~~~-------~ 242 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GYE----VVLTSGPDK---DDL----ACVNEIAQGCQT-------P 242 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CCe----EEEEcCCCh---HHH----HHHHHHHHhcCC-------C
Confidence 34667778776667777552 444444444332 333 445665421 111 122333332211 1
Q ss_pred cEEEecCCCChhhHHHHHHhCcEEEecC
Q 004512 403 PIVIIKEPLSTQDKVPYYAIAECCVVNC 430 (748)
Q Consensus 403 pV~~~~~~v~~~el~aly~~ADv~vvtS 430 (748)
+++-+.|..+-.|+.++++.||++|-+-
T Consensus 243 ~~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 243 PVTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred ccccccCCCCHHHHHHHHHhCCEEEecC
Confidence 2444667889999999999999988654
No 306
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=30.32 E-value=9.3e+02 Score=28.07 Aligned_cols=102 Identities=5% Similarity=0.009 Sum_probs=58.8
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCC---ccccc-
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---CSPSL- 482 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---~~~~l- 482 (748)
+.+.+|+.++.+- ..+++||- +-|+| ...||+.+|.+ .|++.-++- .+..+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~GvP--------------------~v~iP~~~DQ~~Na~rv~ 404 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDALVP--------------------MVGLPMMGDQFYNTNKYV 404 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcCCC--------------------EEECCCCccHHHHHHHHH
Confidence 4567888765432 45677763 45654 55799999762 233322221 11222
Q ss_pred --CCcEEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh------CCHHHHHHHHH
Q 004512 483 --SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS------HDVAYWAKSID 535 (748)
Q Consensus 483 --~~ai~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~------~~~~~W~~~fl 535 (748)
+.|+.+++ .+.+++++||.++|+.+. -+++.++..+.++. ..+.+|.+..+
T Consensus 405 ~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 405 ELGIGRALDTVTVSAAQLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred HcCcEEEeccCCcCHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 12677765 567999999999998753 33444444444443 23456666443
No 307
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=29.99 E-value=82 Score=33.30 Aligned_cols=52 Identities=21% Similarity=0.295 Sum_probs=36.2
Q ss_pred CceEEEecCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHHhc-----CCCCcEEEEcCCChhh
Q 004512 584 NSRLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCN-----DPKNAVFIVSGRGKDS 635 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~-----------------------~~~p~~~~~~~L~~L~~-----d~~~~V~IvSGR~~~~ 635 (748)
..-=|+||.||+|....++ ..-|-...+..|.+|.+ ++...++|||.|+-..
T Consensus 120 ~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apa 199 (264)
T PF06189_consen 120 DQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPA 199 (264)
T ss_pred CceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCch
Confidence 3455899999999986542 12244567777776664 3467899999999653
No 308
>COG4996 Predicted phosphatase [General function prediction only]
Probab=29.91 E-value=84 Score=29.78 Aligned_cols=49 Identities=20% Similarity=0.091 Sum_probs=30.4
Q ss_pred eEEEecCCCCCCCCCCCC---------------------CCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 586 RLILLDYDGTVMPQTSED---------------------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~---------------------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
++|+||.||||.+...+. ...-+.+.+.|..+.+ .+..+-..|=.-.+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~k 70 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDK 70 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHH
Confidence 589999999999755211 0123677788877553 355555555554443
No 309
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=29.75 E-value=43 Score=36.00 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=35.6
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhc
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 641 (748)
-.+++|-||.|.-- ..|-|.+.++|+.|.+.. -.++++|-.+....++++.
T Consensus 23 DtfifDcDGVlW~g----~~~ipGs~e~l~~L~~~g-K~i~fvTNNStksr~~y~k 73 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLG----EKPIPGSPEALNLLKSLG-KQIIFVTNNSTKSREQYMK 73 (306)
T ss_pred CEEEEcCCcceeec----CCCCCChHHHHHHHHHcC-CcEEEEeCCCcchHHHHHH
Confidence 57899999999962 224456777777777664 6788888777665555543
No 310
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=28.74 E-value=1.2e+02 Score=32.04 Aligned_cols=62 Identities=21% Similarity=0.366 Sum_probs=41.9
Q ss_pred hHHHHHHhhcc-CceEEEecCCCCCCCCC-CC--------------------C--------------------CCCCHHH
Q 004512 573 MHHIASAYNKT-NSRLILLDYDGTVMPQT-SE--------------------D--------------------KRPSTEV 610 (748)
Q Consensus 573 ~~~i~~~y~~s-~~rli~lDyDGTL~p~~-~~--------------------~--------------------~~p~~~~ 610 (748)
.++|.+..+.. ...++++|+|-||.-.. +. . ....+++
T Consensus 7 ~~eV~~~~~~~~~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~ 86 (252)
T PF11019_consen 7 FHEVQDYLENADQDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDV 86 (252)
T ss_pred HHHHHHHHHcCCCCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhH
Confidence 34454444433 78899999999998532 10 0 0123567
Q ss_pred HHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 611 LSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 611 ~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
.++++.|.. .+.+|+.+|.|+...
T Consensus 87 ~~~i~~lq~-~~~~v~alT~~~~~~ 110 (252)
T PF11019_consen 87 PNIINSLQN-KGIPVIALTARGPNM 110 (252)
T ss_pred HHHHHHHHH-CCCcEEEEcCCChhh
Confidence 788899885 489999999999653
No 311
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=28.50 E-value=9.8e+02 Score=27.74 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=57.5
Q ss_pred CCceEEEEecc-ccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCc
Q 004512 324 DGKIVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 324 ~~~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
.|+.+.+.+.= .++...+...++..+++.+...+ -|-|....-.-.| .++.++++.|-...+ .
T Consensus 144 ~G~~~~~~i~yt~sp~~t~~y~~~~a~~l~~~Gad------~I~IkDtaG~l~P------~~v~~Lv~alk~~~~----~ 207 (468)
T PRK12581 144 TGKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGAD------SICIKDMAGILTP------KAAKELVSGIKAMTN----L 207 (468)
T ss_pred cCCEEEEEEEEEeCCcCcHHHHHHHHHHHHHcCCC------EEEECCCCCCcCH------HHHHHHHHHHHhccC----C
Confidence 34554444333 36777888888888887654332 2334433211122 245556666643222 2
Q ss_pred cEEEecCCCChh----hHHHHHHhCcEE--EecCCCccCCchhhhhhhh
Q 004512 403 PIVIIKEPLSTQ----DKVPYYAIAECC--VVNCVRDGMNLVPYKYTVS 445 (748)
Q Consensus 403 pV~~~~~~v~~~----el~aly~~ADv~--vvtS~~EGmnLv~~Eama~ 445 (748)
||.+....-.-- -+.|+-..||++ -+.++.+|-|.++.|.++.
T Consensus 208 pi~~H~Hnt~GlA~An~laAieAGad~vD~ai~g~g~gagN~~tE~lv~ 256 (468)
T PRK12581 208 PLIVHTHATSGISQMTYLAAVEAGADRIDTALSPFSEGTSQPATESMYL 256 (468)
T ss_pred eEEEEeCCCCccHHHHHHHHHHcCCCEEEeeccccCCCcCChhHHHHHH
Confidence 566544322222 344555555553 4567788999999998775
No 312
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=28.15 E-value=73 Score=33.33 Aligned_cols=53 Identities=21% Similarity=0.407 Sum_probs=41.1
Q ss_pred ccCceEEEecCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhh
Q 004512 582 KTNSRLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~-----------------------~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~ 635 (748)
+.++.++++|+|-|+.+..+- .+.|-|++.+.|+=.-+ .+..|+-||-|+.+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhc
Confidence 445679999999999875431 23566889999988554 589999999999885
No 313
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=27.87 E-value=4.7e+02 Score=32.28 Aligned_cols=136 Identities=11% Similarity=0.041 Sum_probs=83.3
Q ss_pred CceEEEEeccccccCCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004512 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~ 400 (748)
+..+++.+-|+..-|--.+ .|..++++. ..+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccChhhCC
Confidence 4566788999998887776 666655543 3456541 235666655444333 3335667788888888886422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004512 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (748)
.-.|+|+. ...-.--..++.+|||-.-+| +.++| |||+++-|.. -.|.+-+|..-|+-.
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqis------tag~E--ASGTsnMK~a------------lNGaltlgtlDGanv 663 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQIS------TAGKE--ASGTGNMKFM------------LNGALTIGTLDGANV 663 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCC------CCCcc--ccCcchhHHH------------hcCcceeecccchhH
Confidence 33588875 455555667899999977766 45666 5655433221 135777777767544
Q ss_pred cc
Q 004512 481 SL 482 (748)
Q Consensus 481 ~l 482 (748)
++
T Consensus 664 Ei 665 (794)
T TIGR02093 664 EI 665 (794)
T ss_pred HH
Confidence 43
No 314
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=26.73 E-value=25 Score=40.30 Aligned_cols=13 Identities=31% Similarity=0.754 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCC
Q 004512 586 RLILLDYDGTVMP 598 (748)
Q Consensus 586 rli~lDyDGTL~p 598 (748)
++++||+||||++
T Consensus 242 k~vIFDlDGTLiD 254 (459)
T PRK06698 242 QALIFDMDGTLFQ 254 (459)
T ss_pred hheeEccCCceec
No 315
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=26.29 E-value=4.9e+02 Score=32.16 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=84.0
Q ss_pred CceEEEEeccccccCCHHH-HHHHHHHHH--HhCCCCC-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 004512 325 GKIVILGVDDMDLFKGISL-KFLAMGQLL--EQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~ 400 (748)
+..+++.+-|+..-|--.+ .|...++++ +.+|+.. ..+++|..|-...++ ..-.++-+.|..+++.||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 4466778999998887776 666655543 3466632 235666655443333 2334566788888888875422223
Q ss_pred CccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCccc
Q 004512 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 401 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (748)
.-.|+|+. ...-.--..++.+|||-.-+| +.++| |||+++-|.. -.|+|-+|..-|+-.
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis------~ag~E--ASGTsnMK~a------------mNGaLtlgtlDGanv 665 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIS------TAGKE--ASGTGNMKLA------------LNGALTVGTLDGANV 665 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCC------CCCcc--ccCcchhHHH------------hcCceeeecccchHH
Confidence 33588775 455556667899999977766 45666 5665433221 136788887777644
Q ss_pred cc
Q 004512 481 SL 482 (748)
Q Consensus 481 ~l 482 (748)
++
T Consensus 666 Ei 667 (798)
T PRK14985 666 EI 667 (798)
T ss_pred HH
Confidence 43
No 316
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=25.94 E-value=8.2e+02 Score=26.03 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=25.1
Q ss_pred CCceEEEEecccc-ccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCC
Q 004512 324 DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (748)
Q Consensus 324 ~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 371 (748)
.++..|++..... +.++ .|.+-++++.|+ +++|++|.
T Consensus 174 dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPp 211 (304)
T COG2248 174 DGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPP 211 (304)
T ss_pred cCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCc
Confidence 4667777777776 6665 355668888887 45566654
No 317
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=25.53 E-value=68 Score=32.50 Aligned_cols=30 Identities=13% Similarity=0.306 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHhcCCCCcEEEEcCCChhhH
Q 004512 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (748)
Q Consensus 606 p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L 636 (748)
.++.+.++..+|.+. +.+|+++||-=+..+
T Consensus 89 lT~Gi~eLv~~L~~~-~~~v~liSGGF~~~i 118 (227)
T KOG1615|consen 89 LTPGIRELVSRLHAR-GTQVYLISGGFRQLI 118 (227)
T ss_pred cCCCHHHHHHHHHHc-CCeEEEEcCChHHHH
Confidence 357788888888875 889999999765543
No 318
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=23.87 E-value=69 Score=34.80 Aligned_cols=42 Identities=21% Similarity=0.341 Sum_probs=30.4
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCC---CCcEEEEc
Q 004512 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDP---KNAVFIVS 629 (748)
Q Consensus 584 ~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~---~~~V~IvS 629 (748)
+.-.|+||+||.|.-- ..|-++..++|+.|.++. +..++.+|
T Consensus 34 ~~fgfafDIDGVL~RG----~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFRG----HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CceeEEEecccEEEec----CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 4567999999999853 446678999999999764 34444444
No 319
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=23.85 E-value=1.1e+02 Score=31.50 Aligned_cols=46 Identities=17% Similarity=0.328 Sum_probs=33.9
Q ss_pred EEecCCCCCCCCCCCC-----------CCCCHHHHHHHHHHhcCCCCcEEEEcCCCh
Q 004512 588 ILLDYDGTVMPQTSED-----------KRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (748)
Q Consensus 588 i~lDyDGTL~p~~~~~-----------~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~ 633 (748)
+.+|++|++++..+.. ...-.++.+.|+++.+|++...+|+.+-+.
T Consensus 1 l~i~l~g~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~ 57 (222)
T cd07018 1 LVLDLSGSLVEQPPPSPPLLLGGGESSELSLRDLLEALEKAAEDDRIKGIVLDLDGL 57 (222)
T ss_pred CEEcCCCcccccCCCCChhhhccCCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCC
Confidence 4689999998765322 112268889999999999999888887653
No 320
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=23.07 E-value=6.2e+02 Score=26.40 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=54.5
Q ss_pred CceEEEEecccccc-------CCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 004512 325 GKIVILGVDDMDLF-------KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397 (748)
Q Consensus 325 ~~~vil~VdRld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g 397 (748)
++++|+...-+..- ......++.++.+.+.+|+++ ||+=--|.-..+..+ ....++- .
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~----lvvK~HP~~~~~~~~--------~~~~~~~---~ 180 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAK----LVVKPHPDERGGNKY--------SYLEELP---N 180 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCE----EEEEECchhhCCCCh--------hHhhhhh---c
Confidence 45555555554443 245567777788888899876 554444421111111 1111110 1
Q ss_pred CCCCccEEEecCCCChhhHHHHHHhCcEEE-ecCCCccCCchhhhhhhhcc
Q 004512 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCV-VNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 398 ~~~~~pV~~~~~~v~~~el~aly~~ADv~v-vtS~~EGmnLv~~Eama~~~ 447 (748)
...++++... -....|+..||.++ ++| -|.+||+..|.
T Consensus 181 ---~~~~~~~~~~---~~~~~Ll~~s~~VvtinS------tvGlEAll~gk 219 (269)
T PF05159_consen 181 ---LPNVVIIDDD---VNLYELLEQSDAVVTINS------TVGLEALLHGK 219 (269)
T ss_pred ---CCCeEEECCC---CCHHHHHHhCCEEEEECC------HHHHHHHHcCC
Confidence 1135555443 45778899999765 666 58999999975
No 321
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=22.82 E-value=42 Score=33.26 Aligned_cols=12 Identities=33% Similarity=0.443 Sum_probs=0.0
Q ss_pred eEEEecCCCCCC
Q 004512 586 RLILLDYDGTVM 597 (748)
Q Consensus 586 rli~lDyDGTL~ 597 (748)
++|+||.||||+
T Consensus 2 ~~i~fDktGTLt 13 (215)
T PF00702_consen 2 DAICFDKTGTLT 13 (215)
T ss_dssp SEEEEECCTTTB
T ss_pred eEEEEecCCCcc
No 322
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=22.63 E-value=1e+03 Score=25.94 Aligned_cols=234 Identities=16% Similarity=0.156 Sum_probs=96.7
Q ss_pred EEEeCcchhhHHHHHHhhccCCeEEEEecCCCCchhHhhcCc----chHHHHHHhhhcCEEEeeCHHHHHHHHHHHHHHh
Q 004512 194 VWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP----VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRML 269 (748)
Q Consensus 194 VwvhDyhl~llp~~lr~~~~~~~ig~flH~PfPs~e~fr~lp----~r~~il~~ll~~DlIgF~t~~~~~~Fl~~~~r~l 269 (748)
+||.|.++..+-.+. ..++.++.+.+|-- |--.+....+ .+....+....+|.+-..+....+.|.+ ..
T Consensus 81 ~~i~~~~~~~~~~~~--~~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~----~f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFK--KRKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK----AF 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH----HT
T ss_pred EEEECCCCCcccccc--cCCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH----Hh
Confidence 677664333221111 12568899999965 4333222211 1225556667789877776655544433 22
Q ss_pred CccccccCceeEEEecCeEEEEEEeeccCCcccccccccCchhHHHHHHHHHHc---CCceEEEEeccccccCCH-----
Q 004512 270 GLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI----- 341 (748)
Q Consensus 270 g~~~~~~~g~~~i~~~gr~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi----- 341 (748)
+... . +++..|. .++......... ..+++++.+ .++++||+.=.......-
T Consensus 154 ~~~~-------------~----~i~~~G~--PR~D~l~~~~~~--~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE-------------D----KILVTGY--PRNDYLFNKSKE--NRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G-------------G----GEEES----GGGHHHHHSTT---HHHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc-------------c----eEEEeCC--CeEhHHhccCHH--HHHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 3221 0 1233443 234333222111 145666666 477899998543222221
Q ss_pred HHHHHHHHHHH-HhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChhhHHHHH
Q 004512 342 SLKFLAMGQLL-EQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 342 ~~~l~A~~~ll-~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
.....-+++|. ...++ .+|+.-.- +. .+...... .. ....|+.+.. ..++..++
T Consensus 213 ~~~~~~~~~l~~~~~~~----~~li~k~H------p~---~~~~~~~~-------~~--~~~~i~~~~~---~~~~~~ll 267 (369)
T PF04464_consen 213 FFSDLDFEKLNFLLKNN----YVLIIKPH------PN---MKKKFKDF-------KE--DNSNIIFVSD---NEDIYDLL 267 (369)
T ss_dssp ---TT-HHHHHHHHTTT----EEEEE--S------HH---HHTT-----------TT---TTTEEE-TT----S-HHHHH
T ss_pred cccccCHHHHHHHhCCC----cEEEEEeC------ch---hhhchhhh-------hc--cCCcEEECCC---CCCHHHHH
Confidence 11111223331 22333 33543221 21 11111111 01 1123665543 34899999
Q ss_pred HhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEe--CC------CCccccc-C--CcEEeC
Q 004512 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS--EF------IGCSPSL-S--GAIRVN 489 (748)
Q Consensus 421 ~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~S--e~------~G~~~~l-~--~ai~Vn 489 (748)
..||+++- =+.=+..||+.++. |+|.= +. .|..... . -|-.+
T Consensus 268 ~~aDiLIT-----DySSi~fD~~~l~K---------------------Piify~~D~~~Y~~~rg~~~~~~~~~pg~~~- 320 (369)
T PF04464_consen 268 AAADILIT-----DYSSIIFDFLLLNK---------------------PIIFYQPDLEEYEKERGFYFDYEEDLPGPIV- 320 (369)
T ss_dssp HT-SEEEE-----SS-THHHHHGGGT-----------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE-
T ss_pred HhcCEEEE-----echhHHHHHHHhCC---------------------CEEEEeccHHHHhhccCCCCchHhhCCCcee-
Confidence 99999872 12347999999854 44431 11 2322222 1 24444
Q ss_pred CCCHHHHHHHHHHHhcCCH
Q 004512 490 PWNVDAVADAMDSALQMEN 508 (748)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~ 508 (748)
.+.+++.++|..+++.+.
T Consensus 321 -~~~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 321 -YNFEELIEAIENIIENPD 338 (369)
T ss_dssp -SSHHHHHHHHTTHHHHHH
T ss_pred -CCHHHHHHHHHhhhhCCH
Confidence 478999999999887654
No 323
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.56 E-value=7.2e+02 Score=26.92 Aligned_cols=90 Identities=21% Similarity=0.269 Sum_probs=55.6
Q ss_pred CceEEEEeccccccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccE
Q 004512 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (748)
Q Consensus 325 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV 404 (748)
-+.|++..|--|+ ||+..++.|. + ++-+ +.+-+|.+ + ..+.+.++++..+ + +.++
T Consensus 158 ~r~ilI~lGGsDp-k~lt~kvl~~--L-~~~~-----~nl~iV~g-s--~~p~l~~l~k~~~----~---------~~~i 212 (318)
T COG3980 158 KRDILITLGGSDP-KNLTLKVLAE--L-EQKN-----VNLHIVVG-S--SNPTLKNLRKRAE----K---------YPNI 212 (318)
T ss_pred hheEEEEccCCCh-hhhHHHHHHH--h-hccC-----eeEEEEec-C--CCcchhHHHHHHh----h---------CCCe
Confidence 4558888887774 7777776654 2 2222 33443332 2 2244444433322 2 1245
Q ss_pred EEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhcc
Q 004512 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (748)
Q Consensus 405 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~ 447 (748)
.++. ..++++.|+..||+++..+ |.+.+|+...|.
T Consensus 213 ~~~~---~~~dma~LMke~d~aI~Aa-----GstlyEa~~lgv 247 (318)
T COG3980 213 NLYI---DTNDMAELMKEADLAISAA-----GSTLYEALLLGV 247 (318)
T ss_pred eeEe---cchhHHHHHHhcchheecc-----chHHHHHHHhcC
Confidence 5443 3678999999999999876 788999999876
No 324
>PLN03007 UDP-glucosyltransferase family protein
Probab=22.53 E-value=1.2e+03 Score=26.81 Aligned_cols=112 Identities=13% Similarity=0.007 Sum_probs=55.8
Q ss_pred ecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhhccCCCccccccCCCCCCCCCCCceEEEeCCCCcc---cccC
Q 004512 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS---PSLS 483 (748)
Q Consensus 407 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~---~~l~ 483 (748)
+.+.+|+.+ ++..++|.++=+ +-|+| ..+|++++|.+.-. -|+..-++.-+. +.+.
T Consensus 349 v~~w~PQ~~---iL~h~~v~~fvt-H~G~n-S~~Eal~~GVP~v~----------------~P~~~DQ~~na~~~~~~~~ 407 (482)
T PLN03007 349 IRGWAPQVL---ILDHQATGGFVT-HCGWN-SLLEGVAAGLPMVT----------------WPVGAEQFYNEKLVTQVLR 407 (482)
T ss_pred EecCCCHHH---HhccCccceeee-cCcch-HHHHHHHcCCCeee----------------ccchhhhhhhHHHHHHhhc
Confidence 345788765 455565522222 56877 56799999763100 011111222222 2222
Q ss_pred CcEEeC----------CCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHH
Q 004512 484 GAIRVN----------PWNVDAVADAMDSALQMEN-QEKILRHEKHYKYIS----S-HDVAYWAKSIDQDLE 539 (748)
Q Consensus 484 ~ai~Vn----------P~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~V~----~-~~~~~W~~~fl~~l~ 539 (748)
-|+.+. --+.+++++++++++..++ ++.+++.+++.+.++ + -+..+=.+.|++.+.
T Consensus 408 ~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~ 479 (482)
T PLN03007 408 TGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELN 479 (482)
T ss_pred ceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 233331 1367899999999998753 233344444443332 2 123333455555444
No 325
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=22.53 E-value=1.1e+03 Score=26.25 Aligned_cols=52 Identities=19% Similarity=0.142 Sum_probs=37.9
Q ss_pred HHHHHHhcccCCCCCccEEEecCCCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhh
Q 004512 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (748)
Q Consensus 387 ~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~ 445 (748)
++..++..++|- .+++...+.+++..+-..+|++-++| ++=.|...+++++.
T Consensus 155 ~~L~~~~~e~Gl------~~~tev~d~~~v~~~~~~~d~lqIga-~~~~n~~LL~~va~ 206 (352)
T PRK13396 155 ELLAAAREATGL------GIITEVMDAADLEKIAEVADVIQVGA-RNMQNFSLLKKVGA 206 (352)
T ss_pred HHHHHHHHHcCC------cEEEeeCCHHHHHHHHhhCCeEEECc-ccccCHHHHHHHHc
Confidence 333445555663 33556677778877778899999998 68888999999885
No 326
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=22.33 E-value=2.5e+02 Score=33.02 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=60.2
Q ss_pred cCCCChhhHHHHHHhCcEEE-ecCCCccCCchhhhhhhhccCC--CccccccCCCCCCC---CCCC-ceEEEeCCCCccc
Q 004512 408 KEPLSTQDKVPYYAIAECCV-VNCVRDGMNLVPYKYTVSRQGS--PVLDRALGVDEKNP---PQKK-SVIIVSEFIGCSP 480 (748)
Q Consensus 408 ~~~v~~~el~aly~~ADv~v-vtS~~EGmnLv~~Eama~~~~~--~~~~~~~~~~~~~~---~~~~-g~lV~Se~~G~~~ 480 (748)
.|-++.+|+..+++.|-||| +-.-+| |=.|+||||.|..- |+...-.+ ..+. ..++ .-=+.|+...+..
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s--~~n~~ff~~KPt~r~~~SQhPY~e~ 402 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHS--RLNTEFFKGKPTLREWTSQHPYAEE 402 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCc--ccccccccCCCCcceeccCChHHHh
Confidence 36788999999999999999 555567 46899999987631 11110000 0000 0000 0124454443332
Q ss_pred ccC--CcEEeCCCCHHHHHHHHHHHhcCC
Q 004512 481 SLS--GAIRVNPWNVDAVADAMDSALQME 507 (748)
Q Consensus 481 ~l~--~ai~VnP~d~~~~A~ai~~aL~m~ 507 (748)
-++ --+.|+=.|.+++-+||+++|+++
T Consensus 403 ~iG~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 403 FIGEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred hCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 332 257789999999999999999986
No 327
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=21.98 E-value=81 Score=37.03 Aligned_cols=61 Identities=11% Similarity=0.162 Sum_probs=47.1
Q ss_pred ccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCC-cEEEEcCCChhhHhhhhcCC
Q 004512 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN-AVFIVSGRGKDSLGNWFSGV 643 (748)
Q Consensus 582 ~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~-~V~IvSGR~~~~L~~~~~~~ 643 (748)
....+.+++-.||++...-.....+.+++.+.|++|.+. +. .++|+||......++....+
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~-Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL-GIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred hCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc-CCCcEEEEcCCCHHHHHHHHHHc
Confidence 334566777788887765444556789999999999864 67 99999999999888887653
No 328
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=21.95 E-value=1e+03 Score=27.08 Aligned_cols=35 Identities=6% Similarity=0.107 Sum_probs=23.6
Q ss_pred CCChhhHHHHHHhCcEEEecCCCccCCchhhhhhhh
Q 004512 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (748)
Q Consensus 410 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Eama~ 445 (748)
.++.+|+..++..+||++ +|....-..+-.|.+-.
T Consensus 226 ~~~l~el~~~l~~~DvVi-ssTsa~~~ii~~~~ve~ 260 (414)
T COG0373 226 AVALEELLEALAEADVVI-SSTSAPHPIITREMVER 260 (414)
T ss_pred eecHHHHHHhhhhCCEEE-EecCCCccccCHHHHHH
Confidence 345789999999999955 44455555555554443
No 329
>TIGR00734 hisAF_rel hisA/hisF family protein. This alignment models a family of proteins found so far in three archaeal species: Methanobacterium thermoautotrophicum, Methanococcus jannaschii, and Archaeoglobus fulgidus. This protein is homologous to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA) and, with lower similarity, to the cyclase HisF, both of which are enzymes of histidine biosynthesis. Each species with this protein also encodes HisA. The function of this protein is unknown.
Probab=21.78 E-value=2.7e+02 Score=28.64 Aligned_cols=45 Identities=29% Similarity=0.426 Sum_probs=29.0
Q ss_pred eEEEecCC--CCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHhhhhc
Q 004512 586 RLILLDYD--GTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWFS 641 (748)
Q Consensus 586 rli~lDyD--GTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~~~ 641 (748)
.+|++|+| ||+.. |+-++++.+.+.+. .-+|+|| |+.+++.+.+.
T Consensus 156 ~ii~tdI~~dGt~~G-------~d~eli~~i~~~~~----~pvia~GGi~s~ed~~~l~~ 204 (221)
T TIGR00734 156 GLIVLDIHSVGTMKG-------PNLELLTKTLELSE----HPVMLGGGISGVEDLELLKE 204 (221)
T ss_pred EEEEEECCccccCCC-------CCHHHHHHHHhhCC----CCEEEeCCCCCHHHHHHHHH
Confidence 68888887 88654 44455555544442 3378888 77888887663
No 330
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=21.64 E-value=1.4e+03 Score=27.29 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=55.1
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCCccEEEecCCCChh-
Q 004512 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ- 414 (748)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~- 414 (748)
++.-.+...++-.+++.+.-.+ -|-|....-.-.| .++.++++.|-.+++ .||.+....-.--
T Consensus 148 sp~~t~e~~~~~ak~l~~~Gad------~I~IkDtaG~l~P------~~v~~lv~alk~~~~----ipi~~H~Hnt~Gla 211 (596)
T PRK14042 148 SPVHTLDNFLELGKKLAEMGCD------SIAIKDMAGLLTP------TVTVELYAGLKQATG----LPVHLHSHSTSGLA 211 (596)
T ss_pred CCCCCHHHHHHHHHHHHHcCCC------EEEeCCcccCCCH------HHHHHHHHHHHhhcC----CEEEEEeCCCCCcH
Confidence 6777788888888777654332 3334433211122 245666666665554 2676554322222
Q ss_pred ---hHHHHHHhCcEE--EecCCCccCCchhhhhhhh
Q 004512 415 ---DKVPYYAIAECC--VVNCVRDGMNLVPYKYTVS 445 (748)
Q Consensus 415 ---el~aly~~ADv~--vvtS~~EGmnLv~~Eama~ 445 (748)
-+.|+-..||++ -+.++.+|-|-++.|.++.
T Consensus 212 ~an~laAieaGad~iD~ai~glGg~tGn~~tE~lv~ 247 (596)
T PRK14042 212 SICHYEAVLAGCNHIDTAISSFSGGASHPPTEALVA 247 (596)
T ss_pred HHHHHHHHHhCCCEEEeccccccCCCCcHhHHHHHH
Confidence 344555556653 4566789999999998876
No 331
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=21.48 E-value=73 Score=29.98 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=21.0
Q ss_pred cCChHHHHHHhhccCce-EEEecCCCCCCCCCCCCCCCCHHHHHHHHHHh
Q 004512 570 KLGMHHIASAYNKTNSR-LILLDYDGTVMPQTSEDKRPSTEVLSILNDLC 618 (748)
Q Consensus 570 ~l~~~~i~~~y~~s~~r-li~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~ 618 (748)
.-....++...++..-+ .++.+.+ .+.+...|+++.
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~-------------~~~~~~~l~~~~ 115 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGS-------------RERIERVLERLG 115 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSE-------------HHHHHHHHHHTT
T ss_pred hhhhhhhhhhcccccceeEEeecCC-------------cccccccccccc
Confidence 45567788888755544 4554442 344556666654
No 332
>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and pl
Probab=20.95 E-value=2.8e+02 Score=28.73 Aligned_cols=59 Identities=27% Similarity=0.347 Sum_probs=0.0
Q ss_pred CChHHHHHHhhccCceEEEecC--CCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcC--CChhhHhhhh
Q 004512 571 LGMHHIASAYNKTNSRLILLDY--DGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG--RGKDSLGNWF 640 (748)
Q Consensus 571 l~~~~i~~~y~~s~~rli~lDy--DGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~~ 640 (748)
.+..++++.|...-+.++++|+ |||+.. ++-+++..+.+.+.-| ++++| |+.+++++++
T Consensus 146 ~~~~~~~~~~~~~~~~li~~di~~~G~~~g-------~~~~~~~~i~~~~~ip----vi~~GGi~s~edi~~l~ 208 (233)
T cd04723 146 IGPEELLRRLAKWPEELIVLDIDRVGSGQG-------PDLELLERLAARADIP----VIAAGGVRSVEDLELLK 208 (233)
T ss_pred CCHHHHHHHHHHhCCeEEEEEcCccccCCC-------cCHHHHHHHHHhcCCC----EEEeCCCCCHHHHHHHH
No 333
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=20.94 E-value=51 Score=33.97 Aligned_cols=32 Identities=22% Similarity=0.165 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 004512 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (748)
Q Consensus 586 rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L 617 (748)
++|+||++||.+|+.--....=|-.++.|.++
T Consensus 2 ~~~l~diegt~~~isfv~~~lfpy~~~~~~~~ 33 (220)
T TIGR01691 2 KNVLLDIEGTTGSISFVHDVLFPYAASRLESF 33 (220)
T ss_pred CEEEEecCCCcccHHHHHhhhhHHHHHHHHHH
No 334
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.92 E-value=1.2e+02 Score=37.59 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=48.7
Q ss_pred HHHHhhccCceEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCCCcEEEEcCCChhhHhhhhcC
Q 004512 576 IASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (748)
Q Consensus 576 i~~~y~~s~~rli~lDyDGTL~p~~~~~~~p~~~~~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 642 (748)
..+.+.....+++++-+||+++..-.....+.+++.+.|++|.+. +..++++||......+.....
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~-gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA-GYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHH
Confidence 344455556788888899997754333445667899999998754 789999999999887766654
No 335
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=20.52 E-value=70 Score=34.68 Aligned_cols=39 Identities=26% Similarity=0.639 Sum_probs=30.4
Q ss_pred ecChhhhhhhhhcccccccccccccCCCCCCCCCcccchhhHHHHHHHH
Q 004512 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSAN 176 (748)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN 176 (748)
|++.+.+-..|..|+|. +|+.- .. ..|++++|.+|...+
T Consensus 272 ~~s~~~L~dlY~~~~k~--yPivS--iE------DPFdqdDw~~w~~~~ 310 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKD--YPIVS--IE------DPFDQDDWEAWSKFF 310 (433)
T ss_pred ccCHHHHHHHHHHHHhc--CCeee--ec------CCcchhhHHHHHHHh
Confidence 58888999999999998 67722 11 359999999999655
No 336
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=20.47 E-value=93 Score=31.00 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=10.8
Q ss_pred CChHHHHHHhhccC-ceEEEe
Q 004512 571 LGMHHIASAYNKTN-SRLILL 590 (748)
Q Consensus 571 l~~~~i~~~y~~s~-~rli~l 590 (748)
-.+.++++..++.. +..|+.
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~S 98 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIAT 98 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEe
Confidence 45566666666554 334443
Done!