Query 004512
Match_columns 748
No_of_seqs 387 out of 2869
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 17:43:15 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004512.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1821-1824//hhsearch_pdb/004512hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 1.0 1 1 860.6 43.1 460 50-545 2-477 (496)
2 1uqt_A Alpha, alpha-trehalose- 1.0 1 1 752.5 43.0 454 50-541 1-454 (482)
3 3vue_A GBSS-I, granule-bound s 1.0 1 1 211.6 23.9 293 191-540 154-510 (536)
4 3fro_A GLGA glycogen synthase; 1.0 1 1 211.5 33.1 314 169-543 99-432 (439)
5 3s28_A Sucrose synthase 1; gly 1.0 1 1 209.5 24.4 311 191-541 408-769 (816)
6 2r60_A Glycosyl transferase, g 1.0 1 1 207.1 21.4 304 191-545 121-463 (499)
7 2x6q_A Trehalose-synthase TRET 1.0 1 1 197.2 20.7 300 166-540 105-413 (416)
8 2qzs_A Glycogen synthase; glyc 1.0 1 1 196.6 29.5 299 191-544 130-479 (485)
9 1rzu_A Glycogen synthase 1; gl 1.0 1 1 195.6 27.0 296 191-543 131-477 (485)
10 3c48_A Predicted glycosyltrans 1.0 1 1 194.9 26.4 294 191-545 123-429 (438)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=1.00 E-value=1 Score=860.55 Aligned_cols=460 Identities=17% Similarity=0.269 Sum_probs=407.9
Q ss_pred CCCEEEEECCCCCCEEEECCCCCE---EEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCHH----HHHH--HHHC
Q ss_conf 980899995786210673799915---997548804674430499898428995258635975145----6889--6506
Q 004512 50 CQRRIIVANQLPVKAYYEKDSNKW---GFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQE----EVST--ILLE 120 (748)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~----~~~~--~l~~ 120 (748)
.+++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||++.+.+....+ .+.. ...+
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDRRASALNPDGVTMELHSGR 77 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHHHHHHHCTTCEEEECTTSC
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHC----CCEEEECCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 98789998788706888168995631133169996299876223----97899417886421233304554455545678
Q ss_pred CEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEE
Q ss_conf 717999846925344452101122332223557778--988886426354999999999999999978099-99899991
Q 004512 121 KFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPL--TASHGARFDRGEWQAYLSANKVFADKVMEVINP-DEDYVWIH 197 (748)
Q Consensus 121 ~~~~~pv~l~~~~~~~~y~gf~~~~LWp~~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~DiVwvh 197 (748)
+|+|+||+|+++++++||+||||++|||+|||+.+. .|++ .++++++|++|++||++||++|++.+++ ++|+||||
T Consensus 78 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwVh 156 (496)
T 3t5t_A 78 EILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVH 156 (496)
T ss_dssp EEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEEE
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 757999968999999998774750144012254336778762-1113999999999999999999997446899989994
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCC--CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHH-CCCCC
Q ss_conf 96312599999841359828988638999156762196--5289999956158787618999999999987770-84102
Q 004512 198 DYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRML-GLNYE 274 (748)
Q Consensus 198 Dyhl~llp~~lr~~~~~~~i~~flH~PfPs~e~fr~lp--~r~eil~~ll~~DligF~t~~~~~~Fl~~~~r~l-g~~~~ 274 (748)
|||||+||.|||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||++||+|++ |+++.
T Consensus 157 DYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~ 236 (496)
T 3t5t_A 157 DYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARID 236 (496)
T ss_dssp SGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCC
T ss_conf 75076789999965899839999848999989996576767999999998699999964899999999999982677424
Q ss_pred CCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 45753479964809999995066795101101167203899999999829965999823654358988999999998985
Q 004512 275 SKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354 (748)
Q Consensus 275 ~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~ 354 (748)
...+ .+.++|+.++|.++|+|||++.|.+... +. .++++++++++++|++|||+|+.||+..+|+|| +|+++
T Consensus 237 ~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~ 308 (496)
T 3t5t_A 237 REAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAAR 308 (496)
T ss_dssp TTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHH
T ss_pred CCCC--EEEECCEEEEEEEECCEECHHHHCHHHH--HH---HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHH-HHHHH
T ss_conf 5687--6998998889998163757899430149--99---999999828963999836676115979999999-99874
Q ss_pred CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 99987856899995389999166899999999999997203599997549995599996529999886768886688756
Q 004512 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDG 434 (748)
Q Consensus 355 ~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG 434 (748)
+|+++ +++|+|||.|+|+++++|+++++++++++++||.+||.. ||+|+ +.++.+++.++|++||||++||++||
T Consensus 309 ~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrEG 383 (496)
T 3t5t_A 309 GGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVDG 383 (496)
T ss_dssp TSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSBS
T ss_pred CCCCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC---CEEEE-CCCCHHHHHHHHHHCCEEEECCCCCC
T ss_conf 96553-389999977777874679999999999999846436886---78994-88999999999985659998955145
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCCEEECCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 895145444303699753223577888999987408980887760025-8928949999899999999995299999999
Q 004512 435 MNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKIL 513 (748)
Q Consensus 435 ~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l-~gai~VnP~d~~~~A~ai~~aL~m~~~er~~ 513 (748)
||||++|||||+. ++||+|+|+|+|+++++ .+|++|||||++++|+||.++|+|+++||+.
T Consensus 384 fgLv~~EamA~~~------------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~ 445 (496)
T 3t5t_A 384 QNLSTFEAPLVNE------------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAE 445 (496)
T ss_dssp CCSHHHHHHHHCS------------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCHHHHHHHHHCC------------------CCCCEEEECCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHH
T ss_conf 8906999988179------------------9988899679888788679889989999999999999997499999999
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99989878881799899999999999999840
Q 004512 514 RHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (748)
Q Consensus 514 r~~~~~~~V~~~~~~~W~~~~l~~l~~~~~~~ 545 (748)
|+++++++|.+||+.+|+++|+.+|..+....
T Consensus 446 r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 446 AAARRRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
T ss_conf 99999899997899999999999986324101
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=1.00 E-value=1 Score=752.52 Aligned_cols=454 Identities=28% Similarity=0.523 Sum_probs=411.9
Q ss_pred CCCEEEEECCCCCCEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEC
Q ss_conf 98089999578621067379991599754880467443049989842899525863597514568896506717999846
Q 004512 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (748)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l 129 (748)
++|+||||||+|+... + +.++|||+.+|.+.+. +.+++||||+|.. ++ +++.+.+.+.++|+|+||||
T Consensus 1 ~~~livvsnr~p~~~~-------~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l 68 (482)
T 1uqt_A 1 MSRLVVVSNRIAPPDE-------H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNL 68 (482)
T ss_dssp -CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCCCCC-------C--CCCCCCHHHHHHHHHH-HCCCEEEECCCCC-CC-CCCHHHHHCCCCCEEEEEEC
T ss_conf 9988999889887889-------9--8699858999999985-1797999579998-75-43302341268834999979
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 92534445210112233222355777898888642635499999999999999997809999899991963125999998
Q 004512 130 PADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLR 209 (748)
Q Consensus 130 ~~~~~~~~y~gf~~~~LWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr 209 (748)
+++++++||+||||++|||+|||.++. ..|+.++|.+|+.+|+.||+++.+.+++ +|+|||||||++++|.++|
T Consensus 69 ~~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr 142 (482)
T 1uqt_A 69 SEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELR 142 (482)
T ss_dssp CHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCHHHHHHHHHH
T ss_conf 989999999873661044111576775-----5547788999999999999999984488-9989997734999999999
Q ss_pred HHCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEE
Q ss_conf 41359828988638999156762196528999995615878761899999999998777084102457534799648099
Q 004512 210 KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV 289 (748)
Q Consensus 210 ~~~~~~~i~~flH~PfPs~e~fr~lp~r~eil~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~ 289 (748)
++.++++|+||+|+|||++++|+++|++++++++++++|++|||+++|+++|+++|+++++.+... ++. +.++|+.+
T Consensus 143 ~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~-~~~--~~~~g~~~ 219 (482)
T 1uqt_A 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRS-AKS--HTAWGKAF 219 (482)
T ss_dssp HTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEET-TTE--EEETTEEE
T ss_pred HHCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCC-CCE--EEECCEEE
T ss_conf 868999689998589998899854863799997663168678877999999999999871871325-874--89889278
Q ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf 99995066795101101167203899999999829965999823654358988999999998985999878568999953
Q 004512 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (748)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 369 (748)
+|.++|+|||++.|.+....+++.+ ..+++++++++++|++|||+++.||+..+|+||+++++++|+++++++|+|||.
T Consensus 220 ~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~ 298 (482)
T 1uqt_A 220 RTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (482)
T ss_dssp EEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECC
T ss_pred EEEEEECCCCHHHHHHHHCCCCHHH-HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
T ss_conf 9999846679799997742832479-999999858987999973773657989999999999986913027479999978
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf 89999166899999999999997203599997549995599996529999886768886688756895145444303699
Q 004512 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (748)
Q Consensus 370 p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~ 449 (748)
|+++++++|+++++++++++++||.++|..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 299 p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~- 377 (482)
T 1uqt_A 299 TSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (482)
T ss_dssp BCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCC-
T ss_conf 8765527799999999999999754326678740899579899999999999705999897735588269999991888-
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 75322357788899998740898088776002589289499998999999999952999999999998987888179989
Q 004512 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (748)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~gai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 529 (748)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++++.++++++++|.++++..
T Consensus 378 ---------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~ 442 (482)
T 1uqt_A 378 ---------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINH 442 (482)
T ss_dssp ---------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred ---------------CCCCCEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
T ss_conf ---------------88988899789898799588189898999999999999981999999999999889999689999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q 004512 530 WAKSIDQDLERA 541 (748)
Q Consensus 530 W~~~~l~~l~~~ 541 (748)
|+++|+.++.++
T Consensus 443 ~a~~~l~~l~~~ 454 (482)
T 1uqt_A 443 WQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999844
No 3
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=211.55 Aligned_cols=293 Identities=15% Similarity=0.137 Sum_probs=197.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHC------CCCEEEEEECCCC-----CCHHHH-HCCCC--------------------HH
Q ss_conf 9899991963125999998413------5982898863899-----915676-21965--------------------28
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIY-RTLPV--------------------RD 238 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----Ps~e~f-r~lp~--------------------r~ 238 (748)
+|++++||||..++|.+++... .+++++|+.|..- |....- ..++. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCHH
T ss_conf 87999776048999999998640233202563454215742245555333644189656401033331146410033043
Q ss_pred HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCC--------C
Q ss_conf 99999561587876189999999999877708410245753479964809999995066795101101167--------2
Q 004512 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--------D 310 (748)
Q Consensus 239 eil~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~--------~ 310 (748)
-+-.++..||.|..-+..|++..++... .|. ..+...+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~---------~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGC---------ELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCS---------SSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHCCCC--CCC---------CCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHH
T ss_conf 9999998536778768788534312634--452---------20012545781899799664214887762100144434
Q ss_pred H----HHHHHHHHHHHC-----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHH
Q ss_conf 0----389999999982-----9965999823654358988999999998985999878568999953899991668999
Q 004512 311 V----TGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDL 381 (748)
Q Consensus 311 ~----~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 381 (748)
. .......+++++ ++.++|++|||+++.||+..+++|+.+++++.+ + |+++|. |+. +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~-----G~~--~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGT-----GKK--KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECC-----BCH--HH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC--E----EEEEEC-----CCC--HH
T ss_conf 5556567779999986199879997589999653023784789999997685498--5----999954-----672--68
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999997203599997549995599996529999886768886688756895145444303699753223577888
Q 004512 382 LSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (748)
Q Consensus 382 ~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~ 461 (748)
...+..++...+. .+.+. +..+.++...+|+.||+||+||.+||||++.+|||+||.
T Consensus 370 ~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~-------------- 426 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRAV-VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGT-------------- 426 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEEE-CSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTC--------------
T ss_pred HHHHHHHHHHCCC--------CEEEE-EECCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCC--------------
T ss_conf 9999998761688--------54999-714688899999862342534656898889999998699--------------
Q ss_pred CCCCCCCEEEEECCCCCCCCCC---CCE----------EECCCCHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHH-HHCC
Q ss_conf 9999874089808877600258---928----------9499998999999999952999-99999999898788-8179
Q 004512 462 NPPQKKSVIIVSEFIGCSPSLS---GAI----------RVNPWNVDAVADAMDSALQMEN-QEKILRHEKHYKYI-SSHD 526 (748)
Q Consensus 462 ~~~~~~g~lVlSe~~G~~~~l~---gai----------~VnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~V-~~~~ 526 (748)
|+|+|+.+|..+.+. +|+ +|+|.|++++|++|.++|..-. ++++.+.+ +.+ ..++
T Consensus 427 -------PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~---~am~~~fS 496 (536)
T 3vue_A 427 -------PCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVR---NCMNQDLS 496 (536)
T ss_dssp -------CEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHH---HHHHSCCS
T ss_pred -------CEEECCCCCCHHEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH---HHHHHCCC
T ss_conf -------89990799822202279876324667775158799999999999999998529599999999---98773599
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 98999999999999
Q 004512 527 VAYWAKSIDQDLER 540 (748)
Q Consensus 527 ~~~W~~~~l~~l~~ 540 (748)
|.+-++++.+-...
T Consensus 497 W~~~A~~y~~ly~~ 510 (536)
T 3vue_A 497 WKGPAKNWENVLLG 510 (536)
T ss_dssp SHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=211.54 Aligned_cols=314 Identities=16% Similarity=0.168 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHHHHHHH--CCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCH---HHHHCCC--------
Q ss_conf 9999999999999999780--99998999919631259999984135982898863899915---6762196--------
Q 004512 169 WQAYLSANKVFADKVMEVI--NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRTLP-------- 235 (748)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~~--~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~---e~fr~lp-------- 235 (748)
+..+....+.....+...+ ....|+|++|+++..+++.++++. .++|+++++|..++.. ..+....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 232578999999999997444799819994640343458988652-6997899965344456856774745510035666
Q ss_pred CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHH
Q ss_conf 52899999561587876189999999999877708410245753479964809999995066795101101167203899
Q 004512 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQK 315 (748)
Q Consensus 236 ~r~eil~~ll~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~ 315 (748)
.....-..+-.+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred EEEHHHHHHHHCCEEEECCHHHHHHHHH----HHHH---------------CCCCEEECCCCCCCHHCCCCCCCCHHHHH
T ss_conf 3207666554345887268989999860----5650---------------47734534788880430843221104566
Q ss_pred HHHHHHHC--CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999982--9965999823654-3589889999999989859--99878568999953899991668999999999999
Q 004512 316 VKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQH--PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (748)
Q Consensus 316 ~~~l~~~~--~~k~iil~VdRld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 390 (748)
...+++++ .++.+|+++||++ +.||+..+++|++.+.+++ |+++ |+++|. ++ .++..+++++++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_conf 9999997399998479997333534366999999999998546678718----999807-----97--267789999875
Q ss_pred HHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 97203599997549995599996529999886768886688756895145444303699753223577888999987408
Q 004512 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (748)
Q Consensus 391 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (748)
+.+ .++++.+.++.+++..+|+.||++++||..|||+++.+|||+||. |+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~---------------------Pv 357 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA---------------------IP 357 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC---------------------EE
T ss_pred HCC---------CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCC---------------------CE
T ss_conf 069---------899972879988999999977999958987886189999997799---------------------76
Q ss_pred EEECCCCCCCCCC--CCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 9808877600258--928949999899999999995299999999999898788817998999999999999998
Q 004512 471 IVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (748)
Q Consensus 471 VlSe~~G~~~~l~--gai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~~l~~l~~~~~ 543 (748)
|+|..+|..+.+. .|++++|.|++++|++|.+++++.++.++...++.++++.++++..+++.+++.+++..+
T Consensus 358 i~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 358 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp EEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred EECCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 973788743168758448968899899999999998319999999999999987647299999999999999997
No 5
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=209.50 Aligned_cols=311 Identities=15% Similarity=0.132 Sum_probs=212.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCHH---------H---HHHHHHHCCEEEEECHHHH
Q ss_conf 989999196312599999841359828988638999156762196528---------9---9999561587876189999
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------E---ILKSLLNSDLIGFHTFDYA 258 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~e~fr~lp~r~---------e---il~~ll~~DligF~t~~~~ 258 (748)
-|+|+.|++...+++.+++++ .++|++++.|...+..-......|+. . -...+-.+|.|...+...+
T Consensus 408 PDVIHsH~~~sglva~llar~-~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHH
T ss_conf 739996885389999999997-5998899981663001222330155677888898888899999984999998889999
Q ss_pred HHHHHHHHHHHCCCCCCCCC------E---EEEEECCEEEEEEEEECCCCCCCCCCCCCCCH----HHHHHHHH------
Q ss_conf 99999987770841024575------3---47996480999999506679510110116720----38999999------
Q 004512 259 RHFLSSCSRMLGLNYESKRG------Y---IGLDYFGRTVSIKILPVGIHMGQFESIMSLDV----TGQKVKEL------ 319 (748)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~------~---~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~----~~~~~~~l------ 319 (748)
+.....+ + .+....+ + -++..... ++.++|+|||.+.|.+...... ........
T Consensus 487 ~~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~ 559 (816)
T 3s28_A 487 AGSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559 (816)
T ss_dssp HCCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCC
T ss_pred HHHHHHH----H-HHHHHHCCCCCHHHHCCCCCCCCCC--CEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 9999888----7-7644201354112210122446778--8799889747887286310355432002320001246056
Q ss_pred -HHH-----CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC--CCCCHHHHHHHHHHHHHHHH
Q ss_conf -998-----2996599982365435898899999999898599987856899995389--99916689999999999999
Q 004512 320 -KEK-----FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA--RSSGKDVQDLLSDTNRIAEE 391 (748)
Q Consensus 320 -~~~-----~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~ei~~lv~~ 391 (748)
++. -.++++|+++||+++.||+..+++|+..+.+.+|+++ |+++|... .....+..+...++.+++++
T Consensus 560 ~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~ 635 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEE 635 (816)
T ss_dssp BTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEE----EEEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7777444578998399997447221799999999999785579969----999968875333433569999999999997
Q ss_pred HHCCCCCCCCCCEEEEC---CCCCHHHHHHHHH-HCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 72035999975499955---9999652999988-6768886688756895145444303699753223577888999987
Q 004512 392 INLNFGKPGYEPIVIIK---EPLSTQDKVPYYA-IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467 (748)
Q Consensus 392 IN~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~ 467 (748)
.+.. ..|.|++ +.++.+++..+|+ +||+|++||..|||+++.+|||+||.
T Consensus 636 lgL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-------------------- 689 (816)
T 3s28_A 636 YKLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-------------------- 689 (816)
T ss_dssp TTCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC--------------------
T ss_pred CCCC------CCEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCC--------------------
T ss_conf 4998------72898167556689999999999569099988875576499999998099--------------------
Q ss_pred CEEEEECCCCCCCCCC---CCEEECCCCHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH
Q ss_conf 4089808877600258---928949999899999999995----299999999999898788-81799899999999999
Q 004512 468 SVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSAL----QMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 468 g~lVlSe~~G~~~~l~---gai~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~V-~~~~~~~W~~~~l~~l~ 539 (748)
|+|+|..+|..+.+. .|++|+|.|++++|++|.+++ .++ +.++...++.++++ ..+++..+++++++-..
T Consensus 690 -PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 690 -PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp -CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred -CEEEECCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf -9999689876999706981899689999999999999998752699-99999999999999986899999999999999
Q ss_pred HH
Q ss_conf 99
Q 004512 540 RA 541 (748)
Q Consensus 540 ~~ 541 (748)
+.
T Consensus 768 ~~ 769 (816)
T 3s28_A 768 VY 769 (816)
T ss_dssp HH
T ss_pred HH
T ss_conf 97
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=207.15 Aligned_cols=304 Identities=13% Similarity=0.063 Sum_probs=212.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-HHCC----C---------CHHHH-HHHHHHCCEEEEECH
Q ss_conf 9899991963125999998413598289886389991567-6219----6---------52899-999561587876189
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI-YRTL----P---------VRDEI-LKSLLNSDLIGFHTF 255 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~e~-fr~l----p---------~r~ei-l~~ll~~DligF~t~ 255 (748)
.|+||+|++....++.++.+. .++|++++.|..++.... +... | .+..+ ...+-.+|.|.+.+.
T Consensus 121 ~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~ 199 (499)
T 2r60_A 121 PQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTS 199 (499)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSH
T ss_pred CCEEEECCCCCHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCH
T ss_conf 888997578620799998873-5996899806840011134414787761245567888999999999846899998888
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--------CCC
Q ss_conf 999999999877708-41024575347996480999999506679510110116720389999999982--------996
Q 004512 256 DYARHFLSSCSRMLG-LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--------DGK 326 (748)
Q Consensus 256 ~~~~~Fl~~~~r~lg-~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--------~~k 326 (748)
..++.+... ...| +.. .....++.++|+|||.+.|.+... .+....+++++ .++
T Consensus 200 ~~~~~~~~~--~~~g~~~~-----------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~ 262 (499)
T 2r60_A 200 QERFGQYSH--DLYRGAVN-----------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMEL 262 (499)
T ss_dssp HHHHHTTTS--GGGTTTCC-----------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTS
T ss_pred HHHHHHHHH--HCCCCCCC-----------CCCCCCEEEECCCCCHHHCCCCCH----HHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999864--12464223-----------467887699879958665686410----3567899988364334568887
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC----C---HHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 599982365435898899999999898599987856899995389999----1---668999999999999972035999
Q 004512 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSS----G---KDVQDLLSDTNRIAEEINLNFGKP 399 (748)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~----~---~~~~~l~~ei~~lv~~IN~~~g~~ 399 (748)
++|+++||+++.||+..+++|+..+.+++|+. +.|+++|... +. + ....++.+++++++++.+..
T Consensus 263 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~---- 334 (499)
T 2r60_A 263 PAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR---- 334 (499)
T ss_dssp CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB----
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC---EEEEEECCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC----
T ss_conf 68999606850158899999999998738886---5999987888-753221111320147999999999864998----
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHC----CEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 975499955999965299998867----6888668875689514544430369975322357788899998740898088
Q 004512 400 GYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (748)
Q Consensus 400 ~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlSe~ 475 (748)
+ .|++ .|.++.+++..+|+.| |++|+||..|||+++.+|||+||. |+|+|..
T Consensus 335 ~--~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~---------------------PvI~s~~ 390 (499)
T 2r60_A 335 G--KVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL---------------------PAVVTRN 390 (499)
T ss_dssp T--TEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC---------------------CEEEESS
T ss_pred C--EEEE-CCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCC---------------------CEEEECC
T ss_conf 6--0998-78899899999999557679889978645897968999997699---------------------8898168
Q ss_pred CCCCCCCC---CCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 77600258---92894999989999999999529999999999989878881-799899999999999999840
Q 004512 476 IGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACRDH 545 (748)
Q Consensus 476 ~G~~~~l~---gai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~~l~~l~~~~~~~ 545 (748)
+|..+.+. .|++++|.|++++|++|.++++++ +.++...++.++++.+ +++...++.+++.+++.....
T Consensus 391 ~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 391 GGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESE-ETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp BHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 87788734786079958999999999999998699-99999999999999875799999999999999987321
No 7
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=1.00 E-value=1 Score=197.16 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 35499999999999999997809999899991963125999998413598289886389991567621965289999956
Q 004512 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (748)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~e~fr~lp~r~eil~~ll 245 (748)
...|..|....+.+.+.+ +..++ |+|++|+++...+..++++ ..|++++.|..++.... .....+.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~ 174 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVE 174 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH-HHCCC--CEEEEECCCHHHHHHHHHH---CCCEEEEECCCCCCCCH----HHHHHHHHHHH
T ss_conf 888998999999999987-64399--8899925535569999983---59899998266678427----79999999998
Q ss_pred HCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--
Q ss_conf 158787618999999999987770841024575347996480999999506679510110116720389999999982--
Q 004512 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (748)
Q Consensus 246 ~~DligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 323 (748)
.+|.+.+.+.++.+ ++ +. ..++.++|+|||+..+.+.... ......+++++
T Consensus 175 ~~~~~i~~~s~~~~-----------------~~-----~~--~~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~ 227 (416)
T 2x6q_A 175 KYDRYIFHLPEYVQ-----------------PE-----LD--RNKAVIMPPSIDPLSEKNVELK---QTEILRILERFDV 227 (416)
T ss_dssp TSSEEEESSGGGSC-----------------TT-----SC--TTTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTC
T ss_pred HCCEEEEECHHHHH-----------------HH-----CC--CCCEEEECCCCCHHHHCCCCCC---HHHHHHHHHHHCC
T ss_conf 57979996569997-----------------22-----78--4652894799785664244467---5668999998389
Q ss_pred -CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf -9965999823654358988999999998985999878568999953899991668999999999999972035999975
Q 004512 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (748)
Q Consensus 324 -~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~ 402 (748)
.++++|+++||+++.||+..+++|+..+.+++|+++ |+++|.... ..+ +....+++++++.+.. .
T Consensus 228 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~---~~~~~l~~~~~~~~~~------~ 293 (416)
T 2x6q_A 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDP---EGWIYFEKTLRKIGED------Y 293 (416)
T ss_dssp CTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCH---HHHHHHHHHHHHHTTC------T
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE----EEEEECCCC-CCH---HHHHHHHHHHHHHCCC------C
T ss_conf 9898489999624434697999999999997488818----999966765-655---6799999999980898------8
Q ss_pred CEEEEC--CCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 499955--999965299998867688866887568951454443036997532235778889999874089808877600
Q 004512 403 PIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (748)
Q Consensus 403 pV~~~~--~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~ 480 (748)
.|.+.+ ..++.+++..+|+.||+++.||..|||+++.+|||+||. |+|+|..+|..+
T Consensus 294 ~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~---------------------PvI~~~~~g~~e 352 (416)
T 2x6q_A 294 DVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGK---------------------PVIGRAVGGIKF 352 (416)
T ss_dssp TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC---------------------CEEEESCHHHHH
T ss_pred CEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCC---------------------CEEECCCCCCHH
T ss_conf 67994466888777899999868999987786887608999998499---------------------899725998751
Q ss_pred CCC---CCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHH
Q ss_conf 258---9289499998999999999952999999999998987888-17998999999999999
Q 004512 481 SLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (748)
Q Consensus 481 ~l~---gai~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~~l~~l~~ 540 (748)
.+. .|++++ |++++|++|.++++++ +.++...++.++++. .+++...++.+++.+++
T Consensus 353 ~i~~~~~g~l~~--d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 353 QIVDGETGFLVR--DANEAVEVVLYLLKHP-EVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HCCBTTTEEEES--SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred HEECCCCEEEEC--CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 201288869979--9999999999998599-999999999999998872899999999999999
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=196.59 Aligned_cols=299 Identities=17% Similarity=0.105 Sum_probs=205.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCH----HHHHC--CC-------------CHHHHHHHHHHCCEEE
Q ss_conf 98999919631259999984135982898863899915----67621--96-------------5289999956158787
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS----EIYRT--LP-------------VRDEILKSLLNSDLIG 251 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~----e~fr~--lp-------------~r~eil~~ll~~Dlig 251 (748)
.|+|++|+++..+++.+++.+..++|++++.|..++.. ..+.. ++ ...-.-..+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEE
T ss_conf 97899606213378999754368997899946841357889888876499913213111232465469999987538688
Q ss_pred EECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEE--EEEEEEECCCCCCCCCCCCCC-----------CHHHHHHHH
Q ss_conf 6189999999999877708410245753479964809--999995066795101101167-----------203899999
Q 004512 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT--VSIKILPVGIHMGQFESIMSL-----------DVTGQKVKE 318 (748)
Q Consensus 252 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~--~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~~ 318 (748)
..+...++.+... ..|.... +. ..... .++.++|+|||.+.|.+.... .........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~---~~----~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGME---GL----LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCH---HH----HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ECCHHHHHHHHCC---CCCCCHH---HH----HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 5688999998540---1472468---99----985066786699746987664586444222123663006577884999
Q ss_pred HHHHCC-----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999829-----965999823654358988999999998985999878568999953899991668999999999999972
Q 004512 319 LKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEIN 393 (748)
Q Consensus 319 l~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN 393 (748)
++++++ ++++|+++||+++.||+..+++|+..+.+ +++ .|+++|. ++. ++.+++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGG----QLALLGA-----GDP--VLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTC----EEEEEEE-----ECH--HHHHHHHHHHHHST
T ss_pred HHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCC----EEEEEEC-----CCH--HHHHHHHHHHHHCC
T ss_conf 9987198889997399996667543587999999999862--794----8999928-----956--78999999997579
Q ss_pred CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 03599997549995599996529999886768886688756895145444303699753223577888999987408980
Q 004512 394 LNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (748)
Q Consensus 394 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlS 473 (748)
..|+++.+. +.+++..+|+.||++|+||..|||+++.+|||+||. |+|+|
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~---------------------PvI~s 396 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT---------------------LPLVR 396 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---------------------EEEEE
T ss_pred --------CCEEEECCC-CHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCC---------------------CEEEC
T ss_conf --------938994789-979999999758899978856787679999997799---------------------77987
Q ss_pred CCCCCCCCCC------------CCEEECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 8877600258------------9289499998999999999952--9999999999989878881799899999999999
Q 004512 474 EFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 474 e~~G~~~~l~------------gai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~W~~~~l~~l~ 539 (748)
..+|..+.+. .|++++|.|++++|++|.+++. ..++.++.+.++.++ ..+++...++.+++-.+
T Consensus 397 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 397 RTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYY 474 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHH
T ss_conf 8998325521576443444666459977899999999999999870899999999999876--32898999999999999
Q ss_pred HHHHH
Q ss_conf 99984
Q 004512 540 RACRD 544 (748)
Q Consensus 540 ~~~~~ 544 (748)
+...+
T Consensus 475 ~~~~~ 479 (485)
T 2qzs_A 475 RLKLE 479 (485)
T ss_dssp HHC--
T ss_pred HHHHH
T ss_conf 86542
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=195.61 Aligned_cols=296 Identities=14% Similarity=0.120 Sum_probs=203.9
Q ss_pred CCEEEEECCCHHHHHHHHHHH-CCCCEEEEEECCCCCCH----HHHHC--CCC-------------HHHHHHHHHHCCEE
Q ss_conf 989999196312599999841-35982898863899915----67621--965-------------28999995615878
Q 004512 191 EDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPSS----EIYRT--LPV-------------RDEILKSLLNSDLI 250 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfPs~----e~fr~--lp~-------------r~eil~~ll~~Dli 250 (748)
.|+|++|+++..+++.++++. ..++|+++++|..++.. ..+.. ++. ..-.-..+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEE
T ss_conf 98899646305578999731035899789996675446878877873439980320200013256235999888646779
Q ss_pred EEECHHHHHHHHHHHHHHHC--CCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCC-----------CHHHHHHH
Q ss_conf 76189999999999877708--410245753479964809999995066795101101167-----------20389999
Q 004512 251 GFHTFDYARHFLSSCSRMLG--LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (748)
Q Consensus 251 gF~t~~~~~~Fl~~~~r~lg--~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~ 317 (748)
...+...++.+... ..| +... +.....++.++|+|||.+.|.+.... +...+...
T Consensus 211 i~~S~~~~~~~~~~---~~g~~~~~~---------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 211 STVSPSYAEEILTA---EFGMGLEGV---------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp EESCHHHHHHTTSH---HHHTTCHHH---------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred EECCHHHHHHHHCC---CCCCCHHHH---------HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 96087589998354---357665899---------986068816970898602058866511000124324456788699
Q ss_pred HHHHHCC---C-CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999829---9-65999823654358988999999998985999878568999953899991668999999999999972
Q 004512 318 ELKEKFD---G-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEIN 393 (748)
Q Consensus 318 ~l~~~~~---~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN 393 (748)
.++++++ + +++|+++||+++.||+..+++|+..+.+ +++ .|+++|. ++. ++.+++++++.+.+
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 345 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGA-----GDV--ALEGALLAAASRHH 345 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEEC-----BCH--HHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCC----EEEEEEC-----CCH--HHHHHHHHHHHHCC
T ss_conf 9999629888998399997257531287999999999872--695----6999968-----946--89999999998678
Q ss_pred CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 03599997549995599996529999886768886688756895145444303699753223577888999987408980
Q 004512 394 LNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473 (748)
Q Consensus 394 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlS 473 (748)
..|+++.+. +.+++..+|+.||++|+||..|||+++.+|||+||. |+|+|
T Consensus 346 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~---------------------PvI~s 395 (485)
T 1rzu_A 346 --------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC---------------------IPVVA 395 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC---------------------EEEEE
T ss_pred --------CCEEEECCC-CHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCC---------------------CEEEE
T ss_conf --------868994389-979999998529999978446887779999997799---------------------77980
Q ss_pred CCCCCCCCCC------------CCEEECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 8877600258------------9289499998999999999952--9999999999989878881799899999999999
Q 004512 474 EFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (748)
Q Consensus 474 e~~G~~~~l~------------gai~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~W~~~~l~~l~ 539 (748)
..+|..+.+. .|++++|.|++++|++|.+++. ..++.++.+.++.++ ..+++...++.+++-.+
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 396 RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHH
T ss_pred CCCCHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHH
T ss_conf 8998311321565332345677634867899999999999999872799999999999998--86896999999999999
Q ss_pred HHHH
Q ss_conf 9998
Q 004512 540 RACR 543 (748)
Q Consensus 540 ~~~~ 543 (748)
+...
T Consensus 474 ~~~~ 477 (485)
T 1rzu_A 474 QLIS 477 (485)
T ss_dssp HHTC
T ss_pred HHHC
T ss_conf 8637
No 10
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=194.90 Aligned_cols=294 Identities=16% Similarity=0.193 Sum_probs=212.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-HHCC----C-CHHHHHH-HHHHCCEEEEECHHHHHHHHH
Q ss_conf 9899991963125999998413598289886389991567-6219----6-5289999-956158787618999999999
Q 004512 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI-YRTL----P-VRDEILK-SLLNSDLIGFHTFDYARHFLS 263 (748)
Q Consensus 191 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfPs~e~-fr~l----p-~r~eil~-~ll~~DligF~t~~~~~~Fl~ 263 (748)
.|+|++|++....++.++.+. .++|+++++|..++.... +... + .+..+.+ .+-.+|.|.+.+...++.+..
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
T ss_conf 998994775578999999997-4999899942774011111002677315789999999984089999847999999999
Q ss_pred HHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCCEEEEEECCCCCCCC
Q ss_conf 987770841024575347996480999999506679510110116720389999999982---99659998236543589
Q 004512 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (748)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KG 340 (748)
. .|.. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||
T Consensus 202 ~----~g~~---------------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 H----YDAD---------------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp H----HCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred H----HCCC---------------HHHEEEECCCCCCCCCCCCCC-----CHHHHHHHHCCCCCCCCEEEEEEEECCCCC
T ss_conf 8----5898---------------202688269766110478662-----024566886089989848999743156679
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 88999999998985999878568999953899991668999999999999972035999975499955999965299998
Q 004512 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (748)
Q Consensus 341 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 420 (748)
+..+++|+..+.+++|+. ++.|+++|.+.. .++ ..+++++++.+.+.. + .|++ .+.++.+++..+|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~----~~~~l~~~~~~~~l~----~--~v~~-~g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNA----TPDTYRHMAEELGVE----K--RIRF-LDPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT----T--TEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCC--CEEEEEEECCCC-CCC----HHHHHHHHHHHCCCC----C--CEEE-CCCCCHHHHHHHH
T ss_conf 899999999999639776--669999818887-772----789999999971987----8--6898-5889858899999
Q ss_pred HHCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC---CCEEECCCCHHHHH
Q ss_conf 867688866887568951454443036997532235778889999874089808877600258---92894999989999
Q 004512 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (748)
Q Consensus 421 ~~ADv~vvtS~rEG~nLv~~E~~a~~~~~~~~~~~~~~~~~~~~~~~g~lVlSe~~G~~~~l~---gai~VnP~d~~~~A 497 (748)
+.||++++||..|||+++.+|||+||. |+|+|..+|..+.+. .|++++|.|+++++
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G~---------------------PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la 382 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASGT---------------------PVIAARVGGLPIAVAEGETGLLVDGHSPHAWA 382 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTTC---------------------CEEEESCTTHHHHSCBTTTEEEESSCCHHHHH
T ss_pred HHCCEEEECCCCCCCCHHHHHHHHCCC---------------------CEEECCCCCHHHHHHCCCCEEECCCCCHHHHH
T ss_conf 858999987402687559999987699---------------------88962798725775079727987999999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999529999999999989878881799899999999999999840
Q 004512 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (748)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~~l~~l~~~~~~~ 545 (748)
++|.++++++ +.+....++.++++.++++...++.+++.++++....
T Consensus 383 ~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 383 DALATLLDDD-ETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999997598-9999999999999885799999999999999986313
Done!