Your job contains 1 sequence.
>004514
MDPRLRGFPGSGNGIQLSNQPVSVFPNQNLVAGRFENIFLDQRFRDCRYRQPDPTPINVV
SSSTVNHEEDSPEDCDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGK
KYPPSPDHSLTYFHQNGESPDGDTSRNLHGYIYGGSDVSSYLIDNNFIQNSGEYFNSQLQ
SLPLSTMPQSSYSSSNSVITSVDGLVDSPSSSLQLPDWNNESQSIWQFRKGVEEANKFLP
SENELFVNLEANRLSSWVPKGETNEVAVKEEKEEVEDVSSNGSRGRKNPYREDVDLEEER
SSKQAAIYSESPLRTEMFDMVLLCSGGQSPTVALREALKNASSKTVQQKGQSKGSNGAKG
RGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFAD
GLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSM
RLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADY
AKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLN
FIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDI
FGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDF
VIDEDNRWLLQGWKGRIIYALSAWKPV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004514
(747 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 1630 1.2e-199 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 1601 1.6e-164 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 1199 5.2e-136 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 1193 4.8e-131 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 1108 1.5e-125 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 577 1.4e-58 2
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 521 1.8e-52 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 539 5.6e-52 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 537 9.2e-52 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 480 3.9e-45 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 453 2.9e-44 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 467 5.9e-44 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 457 7.9e-43 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 457 7.9e-43 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 445 1.7e-41 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 432 4.8e-40 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 265 1.1e-39 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 337 6.0e-35 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 380 2.4e-34 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 382 3.5e-33 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 381 2.6e-32 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 360 1.5e-30 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 217 7.7e-28 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 318 1.3e-27 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 338 1.6e-27 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 309 2.7e-25 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 245 1.6e-17 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 179 1.1e-12 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 191 1.7e-11 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 181 1.6e-10 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 174 8.7e-10 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 174 1.6e-09 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 155 1.7e-07 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 105 9.5e-05 1
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 1630 (578.8 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 317/474 (66%), Positives = 374/474 (78%)
Query: 283 SRGRKNPYREDVDLEEERSSKQAAIYSESPLRTEMFDMVLL-CSGGQSPTV--ALREALK 339
S+ RKN R+++ +EEERSSK A++ E LR+++ D +L+ GG+S ALR+ LK
Sbjct: 243 SKARKNSSRDEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGESMKEFNALRDVLK 302
Query: 340 NASSK---TVQQKGQSKGSNGAKGRGKK----QSGKKEVVDLRSLLIHCAQAVAADDRRS 392
K + Q G+ + +GRG+ Q+GKKEVVDLRSLLIHCAQAVAADDRR
Sbjct: 303 KGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRRC 362
Query: 393 AHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQ 452
A + LKQIR HS+PFGDGNQRLA CFA+GLEARLAGTGSQIYKG V+K SAA +LKA+Q
Sbjct: 363 AGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQ 422
Query: 453 LYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKL 512
L+LA CPFRKLS F NKTI L NS R+H+IDFGILYGFQWPT I R SM G PK+
Sbjct: 423 LFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKV 480
Query: 513 RITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEV 572
RITGIEFPQPGFRPA+RVEETG+RLA YAK F VPFEY AIAK+WD IQLE+L IDRDE+
Sbjct: 481 RITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEI 540
Query: 573 LVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREAL 632
VVNCLYRA+NL DE++ V+S R+ LN I KINP +F+ GI NGAYNAPFFVTRFREAL
Sbjct: 541 TVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREAL 600
Query: 633 FHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLR 692
FHFS++FDMLETIVPRED ERM +E ++FGREALNV+ACEGWERVERPETYKQW VR +R
Sbjct: 601 FHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMR 660
Query: 693 AGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 746
+G VQ+P D I+K + +V + YHKDFVID+DNRWLLQGWKGR + ALS WKP
Sbjct: 661 SGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
Score = 325 (119.5 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 97/260 (37%), Positives = 127/260 (48%)
Query: 2 DPRLRGFPGSGNGIQLS---NQPVS-VFPNQNLVAGRFENIFLDQRFRDCRYRQPDPTPI 57
+P L G G N +LS +QP S F L G N+ D P
Sbjct: 4 EPSLTGISGMVNRNRLSGLPDQPSSHSFTPVTLYDGFNYNLSSDH------INTVVAAPE 57
Query: 58 NVVSSSTVNHEEDSPEDCDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDV 117
N V EED +D DFSDAVL YI+QML EED+++K CMLQESLDL+AAE+S Y+
Sbjct: 58 NSVFIREEEEEEDPADDFDFSDAVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEA 117
Query: 118 LGKKYPPSPDHSLTYFHQNGESPDGDTSRNLHGYIYGGSDVSSYLIDNNFIQNSGEYFNS 177
+GKKYPPSP+ +L + +N E+ D N Y G D + N I+ F
Sbjct: 118 IGKKYPPSPERNLAFAERNSENLDRVVPGN-----YTGGDCIGF--GNGGIKPLSSGFTL 170
Query: 178 QLQSLPLXXXXXXXXXXXXXXXXXVDGLVDSPSSSLQLPDWNNES-QSIWQFRKGVEEAN 236
++ DG +D S + N E+ QS+W FR+ +EEAN
Sbjct: 171 DFRNPQSCSSILSVPQSNGLITIYGDG-IDESSKN------NRENHQSVWLFRREIEEAN 223
Query: 237 KFLPSENELFVNL-EANRLS 255
+F P ENEL VN E N +S
Sbjct: 224 RFNPEENELIVNFREENCVS 243
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 1601 (568.6 bits), Expect = 1.6e-164, P = 1.6e-164
Identities = 337/699 (48%), Positives = 455/699 (65%)
Query: 71 SPEDCDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGKKYPPSPDHSL 130
S +D DFSD+VL+YI+Q+LMEED+EEK CM ++L LQAAEKS Y+ LG+KYP S S
Sbjct: 76 SSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSSASS 135
Query: 131 TYFHQN--GESPDGDTSRNLHG-YIYGGSDVSS---YLIDNNFIQNSGEYFNSQLQSLPL 184
+ +SPDG S Y + SS + +D ++N + ++ + S +
Sbjct: 136 VDHPERLASDSPDGSCSGGAFSDYASTTTTTSSDSHWSVDG--LENRPSWLHTPMPSNFV 193
Query: 185 XXXXXXXXXXXXXXXXXVDGLVDSPSSSLQLPDWNNESQSIWQFRKGVEEANKFLPSENE 244
+ S + + + + QF+KGVEEA+KFLP ++
Sbjct: 194 FQSTSRSNSVTGGGGGGNSAVYGSGFGDDLVSNMFKDDELAMQFKKGVEEASKFLPKSSQ 253
Query: 245 LFVNLEA----NRLS----SWVPKGETNXXXXXXXXXXXXXXSSNGSRGRKNPYR-EDVD 295
LF+++++ N S S V N G+K+ +R ED D
Sbjct: 254 LFIDVDSYIPMNSGSKENGSEVFVKTEKKDETEHHHHHSYAPPPNRLTGKKSHWRDEDED 313
Query: 296 LEEERSSKQAAIYSESPLRTEMFDMVLLCSGGQSPTVALREALKNASSKTVQQKGQSKGS 355
EERS+KQ+A+Y E +EMFD +L+C G+ P L + S+K V + S
Sbjct: 314 FVEERSNKQSAVYVEESELSEMFDKILVCGPGK-PVCILNQNFPTESAKVVTAQ-----S 367
Query: 356 NGAKGRGKKQSG-------KKEVVDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFG 408
NGAK RGKK + KKE DLR+LL+ CAQAV+ DDRR+A+E L+QIR+HSSP G
Sbjct: 368 NGAKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLG 427
Query: 409 DGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTA 468
+G++RLA FA+ LEARLAGTG+QIY +K+TSAAD+LKAYQ Y++ CPF+K + A
Sbjct: 428 NGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFA 487
Query: 469 NKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISM-RPGGPPKLRITGIEFPQPGFRPA 527
N ++M N+ +HIIDFGI YGFQWP I R+S+ RPGG PKLRITGIE PQ GFRPA
Sbjct: 488 NHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPA 547
Query: 528 ERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDE 587
E V+ETG RLA Y + NVPFEYNAIA++W+TIQ+E+LK+ + E +VVN L+R +NLLDE
Sbjct: 548 EGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDE 607
Query: 588 TIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVP 647
T+ V+S R+ L IRKINP++FI I +G YNAPFFVTRFREALFH+SA+FDM ++ +
Sbjct: 608 TVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLA 667
Query: 648 REDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKR 707
RED R++ EK+ +GRE +NVVACEG ERVERPETYKQWQ R +RAGF QLPL++++++
Sbjct: 668 REDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQN 727
Query: 708 ATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 746
++ +GY K+F +D++ WLLQGWKGRI+YA S W P
Sbjct: 728 LKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVP 766
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 1199 (427.1 bits), Expect = 5.2e-136, Sum P(2) = 5.2e-136
Identities = 261/550 (47%), Positives = 356/550 (64%)
Query: 209 PSSSLQLPDWNNESQSIWQFRKGVEEANKFLPSENELFVNLEANRLSSWVP-KGETNXXX 267
P++ + + ++++S+ QF++G+EEA+KFLP+ ++ NLE + VP K E
Sbjct: 175 PANEILVRSMFSDAESVLQFKRGLEEASKFLPNTDQWIFNLEPE-MERVVPVKVEEGWSA 233
Query: 268 XXXXXXXXXXXSSNGSRGRKNPYR---EDVDLEE-ERSSKQAAIYSESPLRTEMFDMVLL 323
S+ RKN + E+ DLEE R SKQ A+ E TEMFD VLL
Sbjct: 234 I--------------SKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLL 279
Query: 324 CSGGQSPTVALREALKNASSKTVQQKGQSKGSNGAKGRGKKQSGKKEVVDLRSLLIHCAQ 383
G P + E +N SSK + +KG R KK+S VD R+LL CAQ
Sbjct: 280 LDGECDPQII--EDGENGSSKALVKKG----------RAKKKS---RAVDFRTLLTLCAQ 324
Query: 384 AVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAG-TGSQI---YKGFVN 439
+V+A D+ +A + L+QIR+ SP GD +QRLA FA+ LEARL G TG+ I Y +
Sbjct: 325 SVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISS 384
Query: 440 KRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFI 499
K+ +AA ILK+Y ++L+A PF L F +NK I+ A+++ LHI+DFGILYGFQWP FI
Sbjct: 385 KKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFI 444
Query: 500 QRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIA-KRWD 558
Q +S G KLRITGIE PQ G RP ER+++TGRRL +Y K F VPFEYNAIA K W+
Sbjct: 445 QHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWE 504
Query: 559 TIQLEELKIDRDEVLVVNCLYRAKNLLDETIAV-DSSRNIFLNFIRKINPHMFIHGITNG 617
TI++EE KI +EVL VN + R KNL D D R+ FL IR +NP++F+ NG
Sbjct: 505 TIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNG 564
Query: 618 AYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEGWERV 677
++NAPFF TRF+EALFH+SA+FD+ + +E+ ER+ E + +GRE +NV+ACEG +RV
Sbjct: 565 SFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRV 624
Query: 678 ERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRS-GYHKDFVIDEDNRWLLQGWKGR 736
ERPETYKQWQVR +RAGF Q P++ ++V+ ++++ GYHKDFV+DED+ W LQGWKGR
Sbjct: 625 ERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGR 684
Query: 737 IIYALSAWKP 746
I+++ S W P
Sbjct: 685 ILFSSSCWVP 694
Score = 154 (59.3 bits), Expect = 5.2e-136, Sum P(2) = 5.2e-136
Identities = 50/188 (26%), Positives = 88/188 (46%)
Query: 66 NHEEDSPED-CDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGKKYPP 124
+H P D D + +L+Y+NQ+LMEE + EK + +SL L+ E+ V+
Sbjct: 53 DHHFSPPADEIDSENTLLKYVNQLLMEESLAEKQSIFYDSLALRQTEEMLQQVISDSQTQ 112
Query: 125 S--PDHSLTYFHQNGESPDGDTSRNLHGYIYGGSDVSSYLIDNNFIQNSGEYFNSQLQSL 182
S P++S+T + S GD Y S SS I+N + ++ +S + S
Sbjct: 113 SSIPNNSIT---TSSSSNSGD---------YSNSSNSSVRIENEVLFDNKHLGDSGVVSF 160
Query: 183 PLXXXXXXXXXXXXXXXXXVDGLVDSPSSSLQLPDWNNESQSIWQFRKGVEEANKFLPSE 242
P P++ + + ++++S+ QF++G+EEA+KFLP+
Sbjct: 161 PGSNMLRGGEQFG------------QPANEILVRSMFSDAESVLQFKRGLEEASKFLPNT 208
Query: 243 NELFVNLE 250
++ NLE
Sbjct: 209 DQWIFNLE 216
Score = 125 (49.1 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 48/167 (28%), Positives = 78/167 (46%)
Query: 8 FPGSGNGIQLSNQPVSVFPNQNLVAGRFENIFLDQRFRDCRYRQPDPTPINVVSSSTVNH 67
+ G NG +S P S+ P+ L G + D R D Y QP I V +H
Sbjct: 5 YSGVVNGYDVSFLPTSI-PD--LGFGVPSSSDFDLRM-DQYYHQPS---IWVPDQD--HH 55
Query: 68 EEDSPEDCDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGKKYPPS-- 125
++ D + +L+Y+NQ+LMEE + EK + +SL L+ E+ V+ S
Sbjct: 56 FSPPADEIDSENTLLKYVNQLLMEESLAEKQSIFYDSLALRQTEEMLQQVISDSQTQSSI 115
Query: 126 PDHSLTYFHQNGESPDGDTSRNLHGYIYGGSDVSSYLIDNNFIQNSG 172
P++S+T + S GD S + + + ++V L DN + +SG
Sbjct: 116 PNNSIT---TSSSSNSGDYSNSSNSSVRIENEV---LFDNKHLGDSG 156
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 1193 (425.0 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 239/474 (50%), Positives = 318/474 (67%)
Query: 280 SNGSRGRKNPYREDV--DLEEERSSKQAAIY-SE-SPLRTEMFDMVLLCSGGQSPTVALR 335
S+G RK +R D DLE R +KQ AI+ SE L ++ ++L+C Q R
Sbjct: 134 SSGESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEEEEE-R 192
Query: 336 EALKNASSKTVQQKGQSKGSNGAKGRGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHE 395
+ S T + G++KGS+ K ++ K VDLRSLL CAQAVA+ D+R A +
Sbjct: 193 TVITKQS--TPNRAGRAKGSSN-----KSKTHKTNTVDLRSLLTQCAQAVASFDQRRATD 245
Query: 396 FLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQ-IYKGFVNKRTSAADILKAYQLY 454
LK+IR HSS GDG QRLA FA+ LEAR+ G S + F + TS DILKAY+L+
Sbjct: 246 KLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLF 305
Query: 455 LAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRI 514
+ CP F ANK+I LA + +LHI+DFG+LYGFQWP ++ +S RPGGPP LR+
Sbjct: 306 VHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRV 365
Query: 515 TGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLV 574
TGIE PQ GFRP++RVEETGRRL + FNVPFE+N IAK+W+TI L+EL I+ E V
Sbjct: 366 TGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTV 425
Query: 575 VNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFH 634
VNC++R + DET+++DS R+ L R INP +F+ NG YN+PFF+TRFREALFH
Sbjct: 426 VNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFH 485
Query: 635 FSAMFDMLETIVPRED--RERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLR 692
+S++FDM +T + ED + R ++E+++ R+A++V++CEG ER RPETYKQW+VR LR
Sbjct: 486 YSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILR 545
Query: 693 AGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 746
AGF + + I+K A + VR YH+DFVID DN W+LQGWKGR+IYA S WKP
Sbjct: 546 AGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKP 599
Score = 113 (44.8 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 62 SSTVNHEEDSPED-CDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGK 120
S + DSP C + VL+YIN MLM+E E+ + ++ L LQAAE+SFY+++ +
Sbjct: 41 SQNQSSPNDSPPTVCLDNSPVLKYINDMLMDE--EDFVGISRDDLALQAAERSFYEIIQQ 98
Query: 121 KYPPSPDHSLTYFHQNGESPD 141
+ P S ++ + QN D
Sbjct: 99 QSPESDQNTSSSSDQNSGDQD 119
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 1108 (395.1 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 216/408 (52%), Positives = 281/408 (68%)
Query: 339 KNASSKTVQQKGQSKGSNGAKGRGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLK 398
KN + ++K ++ G+ R K+Q + V D+R+LL+ CAQAVA+ D+R A E LK
Sbjct: 177 KNDQGEATEKK--TRHVKGSSNRYKQQKSDQPV-DMRNLLMQCAQAVASFDQRRAFEKLK 233
Query: 399 QIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLAAC 458
+IR+HSS GD QRL FA+ LEAR+ GT + + RTS DILKAY+ ++ AC
Sbjct: 234 EIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISA-TSSRTSMVDILKAYKGFVQAC 292
Query: 459 PFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRITGIE 518
P + FTAN+TI LA + LHIIDFGILYGFQWP IQ +S R GPP LR+TGIE
Sbjct: 293 PTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIE 352
Query: 519 FPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCL 578
PQ GFRP+ERVEETGRRL + FNVPFEY+ IAK W+ I L++L I+ E VVNC+
Sbjct: 353 LPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCI 412
Query: 579 YRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAM 638
R + DET++++S R+ L R INP +F+ NG YN+PFF+TRFREALFH S++
Sbjct: 413 LRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSL 472
Query: 639 FDMLETIVPREDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQL 698
FDM ET + +D R ++E+++ R+A++V+ACEG ER RPETYKQWQVR LRAGF
Sbjct: 473 FDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPA 532
Query: 699 PLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWKP 746
L + IVK + V+ YHKDFVID DN W+ QGWKGR++YA+S WKP
Sbjct: 533 KLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKP 580
Score = 207 (77.9 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 55/138 (39%), Positives = 78/138 (56%)
Query: 292 EDVDLEEERSSKQAAIYSESPLRTEMFDMVLLCSGGQSPTVALREALKNASSKTVQQKGQ 351
ED DLE R SK AI + L + +++L+C KN + ++K
Sbjct: 143 EDDDLESGRKSKLPAISTVDELAEKFEEVLLVCQ-------------KNDQGEATEKK-- 187
Query: 352 SKGSNGAKGRGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGN 411
++ G+ R K+Q + V D+R+LL+ CAQAVA+ D+R A E LK+IR+HSS GD
Sbjct: 188 TRHVKGSSNRYKQQKSDQPV-DMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDAT 246
Query: 412 QRLAKCFADGLEARLAGT 429
QRL FA+ LEAR+ GT
Sbjct: 247 QRLGYHFAEALEARITGT 264
Score = 146 (56.5 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 61 SSSTVNHEEDSPEDCDFSDAVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGK 120
S S N + C V +YIN MLMEED+E ++CML++SL LQAAE+SF++VL
Sbjct: 42 SESQSNPSPTESKVCSDYLPVFKYINDMLMEEDLEGQSCMLEDSLALQAAERSFFEVLQD 101
Query: 121 KYPPSPD 127
+ P S D
Sbjct: 102 QTPISGD 108
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 577 (208.2 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 123/375 (32%), Positives = 204/375 (54%)
Query: 373 DLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQ 432
DLR+ L+ CA+A++ +D AH ++++RQ S G+ QRL +GL A+LA +GS
Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSS 177
Query: 433 IYKGFVNK--RTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGIL 490
IYK +N+ ++ ++L + CP+ K +AN I + R+HIIDF I
Sbjct: 178 IYKA-LNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIG 236
Query: 491 YGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEY 550
G QW T IQ + RPGGPP++RITGI+ + + G RLA AK FNVPFE+
Sbjct: 237 QGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEF 296
Query: 551 NAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMF 610
N+++ ++ + L + E L VN + ++ DE+++ ++ R+ L ++ ++P +
Sbjct: 297 NSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVV 356
Query: 611 IHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVA 670
N F RF E + +++AMF+ ++ +PR+ ++R+ +E+ R+ +N++A
Sbjct: 357 TLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIA 416
Query: 671 CEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLL 730
CEG +RVER E +W+ R AGF PL +V + Y + ++E + L
Sbjct: 417 CEGADRVERHELLGKWRSRFGMAGFTPYPLS-PLVNSTIKSLLRNYSDKYRLEERDGALY 475
Query: 731 QGWKGRIIYALSAWK 745
GW R + A AWK
Sbjct: 476 LGWMHRDLVASCAWK 490
Score = 42 (19.8 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 41 DQRFRDCRYRQ-PDPTPINVVSSSTVNHEEDS---PEDCDFSDAVLRYINQMLMEEDIEE 96
+ R R C PD P N +S++T + S E DF + R I ++M D +
Sbjct: 29 NSRKRFCTLEPFPDSPPYNALSTATYDDTCGSCVTDELNDFKHKI-REIETVMMGPDSLD 87
Query: 97 KNCMLQESLDLQAAEK 112
+S D A+++
Sbjct: 88 LLVDCTDSFDSTASQE 103
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 521 (188.5 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 125/408 (30%), Positives = 208/408 (50%)
Query: 343 SKTVQQKGQSKGSNGAKGRGKKQSGKKEVVDL---RSLLIHCAQAVAADDRRSAHEFLKQ 399
+++ Q + K S+ A S KEVV + +LI CA+A++ A + +
Sbjct: 190 NESEQHQDSPKESSSADSNSHVSS--KEVVSQATPKQILISCARALSEGKLEEALSMVNE 247
Query: 400 IRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLAACP 459
+RQ S GD +QR+A +GL AR+A +G IY+ K + + L A Q+ CP
Sbjct: 248 LRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFEVCP 307
Query: 460 FRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRITGIEF 519
K AN I+ + +HIIDF I G Q+ T I+ I+ PG P+LR+TGI+
Sbjct: 308 CFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDD 367
Query: 520 PQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCLY 579
P+ R + G RL A+D V F++ A+ + + L E L+VN +
Sbjct: 368 PESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAF 427
Query: 580 RAKNLLDETIAVDSSRNIFLNFIRKINPHMF--IHGITNGAYNAPFFVTRFREALFHFSA 637
+ ++ DE++ + R+ L+ ++ +NP + + N +PFF RF EA ++SA
Sbjct: 428 QLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVN-TNTSPFF-PRFIEAYEYYSA 485
Query: 638 MFDMLETIVPREDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQ 697
+F+ L+ +PRE +ERM +E+ R+ +N+VACEG ER+ER E +W+ R + AGF
Sbjct: 486 VFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNP 545
Query: 698 LPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWKGRIIYALSAWK 745
P+ + + ++ Y + + E+ L W+ + + SAW+
Sbjct: 546 KPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
Score = 40 (19.1 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 89 LMEEDIEEKNCMLQESLDLQAAEKSFYD 116
+ + D + C+ +S Q+ EK F D
Sbjct: 49 IFDPDRSKNPCLTDDSYPSQSYEKYFLD 76
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 121/373 (32%), Positives = 194/373 (52%)
Query: 373 DLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQ 432
DL+ +L CA+AV D + Q++Q S G+ QRL +GL ARLA +GS
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSS 285
Query: 433 IYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYG 492
IYK K + ++L + ACP+ K +AN I +N +HIIDF I G
Sbjct: 286 IYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQG 345
Query: 493 FQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNA 552
QW + I+ + RPGGPP +RITGI+ P+ F +E G+RL A+ VPFE++
Sbjct: 346 GQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHG 405
Query: 553 IAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIH 612
A +++E+L + E L VN ++ DE++ V++ R+ L ++ ++P++
Sbjct: 406 AALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTL 465
Query: 613 GITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACE 672
N F+ RF E + H+ A+F+ ++ + R+ +ER+ +E+ RE +N++ACE
Sbjct: 466 VEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACE 525
Query: 673 GWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQG 732
G ER ER E +W+ R AGF PL V + Y + + ++E + L G
Sbjct: 526 GVEREERHEPLGKWRSRFHMAGFKPYPLS-SYVNATIKGLLESYSEKYTLEERDGALYLG 584
Query: 733 WKGRIIYALSAWK 745
WK + + AW+
Sbjct: 585 WKNQPLITSCAWR 597
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 122/373 (32%), Positives = 198/373 (53%)
Query: 373 DLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQ 432
DL+ +L+ CA+AV+ ++ A + ++R S G+ QRL +GL ARLA +GS
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 433 IYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYG 492
IYK ++ + + L + CP+ K +AN I ++ R+HIIDF I G
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQG 168
Query: 493 FQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNA 552
QW IQ + RPGG P +RITG+ G + +RL AK F+VPF +NA
Sbjct: 169 SQWIALIQAFAARPGGAPNIRITGV-----G--DGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 553 IAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIH 612
+++ +++E L + E L VN Y +L DE++++++ R+ L ++ ++P +
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTL 281
Query: 613 GITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACE 672
N F+ RF E L +++AMF+ ++ ++PR +ER+ IE+ R+ +N++ACE
Sbjct: 282 VEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACE 341
Query: 673 GWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQG 732
G ER+ER E +W+ R AGF PL I+ + Y + I+E + L G
Sbjct: 342 GAERIERHELLGKWKSRFSMAGFEPYPLS-SIISATIRALLRDYSNGYAIEERDGALYLG 400
Query: 733 WKGRIIYALSAWK 745
W RI+ + AWK
Sbjct: 401 WMDRILVSSCAWK 413
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 480 (174.0 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 117/387 (30%), Positives = 206/387 (53%)
Query: 363 KKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGL 422
K+Q +E + L +LL+ CA+AV+AD+ A++ L +I Q S+P+G QR+A F++ +
Sbjct: 279 KRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAM 338
Query: 423 EARLAGTGSQIYKGFVNK---RTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNS 479
ARL + IY ++ +T + ++ A+Q++ P K S+FTAN+ I +
Sbjct: 339 SARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKE 398
Query: 480 MRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLAD 539
+HIID I+ G QWP ++ RPGGPP +R+TG+ G E ++ TG+RL+D
Sbjct: 399 DSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGL-----G-TSMEALQATGKRLSD 452
Query: 540 YAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFL 599
+A +PFE+ +A++ + E L + + E + V+ L + L D T + + ++L
Sbjct: 453 FADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQHS--LYDVTGS--DAHTLWL 508
Query: 600 NFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKD 659
++++ P + + + +A F+ RF EA+ ++SA+FD L E ER V+E+
Sbjct: 509 --LQRLAPKV-VTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQ 565
Query: 660 IFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKD 719
+ +E NV+A G R + ++ W+ + + GF + L + +AT +
Sbjct: 566 LLSKEIRNVLAVGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDG 624
Query: 720 FVIDEDNRWLLQGWKGRIIYALSAWKP 746
+ + +DN L GWK + SAW P
Sbjct: 625 YTLVDDNGTLKLGWKDLSLLTASAWTP 651
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 453 (164.5 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 113/378 (29%), Positives = 192/378 (50%)
Query: 374 LRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQI 433
L + CA+ ++ D A + L QIR+ S GD +R+A F + L RL+
Sbjct: 217 LLKAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPAT 275
Query: 434 YKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGF 493
+ +S D++ +Y+ ACP+ K ++ TAN+ I+ + S ++HI+DFGI+ G
Sbjct: 276 S----SSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGI 331
Query: 494 QWPTFIQRISMRPGGPP-KLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNA 552
QWP +Q ++ R G P ++R++GI P G P + TG RL D+AK ++ F++
Sbjct: 332 QWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIP 391
Query: 553 IAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDET-IAVDSSRNIFLNFIRKINPHMFI 611
I + ++D DEVL VN + + LLDET VD++ L + +NP +
Sbjct: 392 ILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTA----LRLAKSLNPRVVT 447
Query: 612 HGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVAC 671
G + N F R + AL +SA+F+ LE + R+ ER+ +E+++FGR ++
Sbjct: 448 LGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGP 507
Query: 672 E--GWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDF--VIDEDNR 727
E G R ER E +QW+V AGF + L V +A + + + + +++
Sbjct: 508 EKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPG 566
Query: 728 WLLQGWKGRIIYALSAWK 745
++ W + LS+W+
Sbjct: 567 FISLAWNDLPLLTLSSWR 584
Score = 39 (18.8 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 52 PDPT---PINVVSSSTVNHEEDSPEDCDFSDA 80
P PT P + +S + HE + ED + +D+
Sbjct: 175 PPPTLWPPSSPLSIPPLTHESPTKEDPETNDS 206
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 467 (169.5 bits), Expect = 5.9e-44, P = 5.9e-44
Identities = 123/414 (29%), Positives = 213/414 (51%)
Query: 339 KNASSKTVQQKGQSKGSNGAKGRGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLK 398
+ ASSK ++ + S+ + ++ V L L+ CA+A+ ++ A +K
Sbjct: 145 EEASSKRIRLGSWCESSDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVK 204
Query: 399 QIRQHSSPFGDGNQRLAKCFADGLEARLAG--TGSQIYKGFVNKRTSAADILKAYQLYLA 456
++ + ++A FA L R+ T VN S ++L+ + +
Sbjct: 205 RVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNP--SFEEVLEMH--FYE 260
Query: 457 ACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRITG 516
+CP+ K ++FTAN+ I+ + R+H+ID G+ G QWP +Q +++RPGGPP R+TG
Sbjct: 261 SCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTG 320
Query: 517 IEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIA-KRWDTIQLEELKI-DRDEVLV 574
I PQ ++ +++ G +LA +A++ V FE+ +A + ++ E + E LV
Sbjct: 321 IGPPQT--ENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLV 378
Query: 575 VNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFH 634
VN ++ LL + +++ LN ++ I P + +N F+ RF EAL +
Sbjct: 379 VNSVFELHRLLARSGSIEK----LLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHY 434
Query: 635 FSAMFDMLETI--VPREDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLR 692
+S++FD LE +P +DR V+ + GR+ LNVVA EG +RVER ET QW++R
Sbjct: 435 YSSLFDSLEDSYSLPSQDR---VMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKS 491
Query: 693 AGFVQLPLDRDIVKRATDRVRSGYHKD-FVIDEDNRWLLQGWKGRIIYALSAWK 745
AGF + L K+A+ + D + ++E++ L+ GW+ R + SAWK
Sbjct: 492 AGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 457 (165.9 bits), Expect = 7.9e-43, P = 7.9e-43
Identities = 120/380 (31%), Positives = 198/380 (52%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHS-SPFGDGNQRLAKCFADGLEARLAGTG 430
V L L+ CA+AV ++ A +KQI + S G +++A FA+ L R+
Sbjct: 167 VRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG-AMRKVATYFAEALARRIYRLS 225
Query: 431 SQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGIL 490
+ ++ S +D L+ + + CP+ K ++FTAN+ I+ Q R+H+IDF +
Sbjct: 226 PS--QSPIDH--SLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMS 279
Query: 491 YGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEY 550
G QWP +Q +++RPGGPP R+TGI P P + + E G +LA A+ +V FEY
Sbjct: 280 QGLQWPALMQALALRPGGPPVFRLTGIGPPAPD--NFDYLHEVGCKLAHLAEAIHVEFEY 337
Query: 551 NA-IAKRWDTIQLEELKIDRDEV--LVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINP 607
+A + L++ E+ + VN ++ LL A+D L + +I P
Sbjct: 338 RGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDK----VLGVVNQIKP 393
Query: 608 HMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALN 667
+F +N+P F+ RF E+L ++S +FD LE + +D+ V+ + G++ N
Sbjct: 394 EIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDK---VMSEVYLGKQICN 450
Query: 668 VVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVR--SGYHKDFVIDED 725
VVAC+G +RVER ET QW+ R AGF + + K+A+ + +G + + ++E
Sbjct: 451 VVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNG-GEGYRVEES 509
Query: 726 NRWLLQGWKGRIIYALSAWK 745
+ L+ GW R + A SAWK
Sbjct: 510 DGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 457 (165.9 bits), Expect = 7.9e-43, P = 7.9e-43
Identities = 120/377 (31%), Positives = 200/377 (53%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGS 431
V L L+ CA+AV ++ + A +K + +S +++A FA+GL R+
Sbjct: 150 VRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIY---- 205
Query: 432 QIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILY 491
+IY +S +D L+ + + +CP+ K ++FTAN+ I+ + + ++H+ID G+ +
Sbjct: 206 RIYPRDDVALSSFSDTLQIH--FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNH 263
Query: 492 GFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYN 551
G QWP IQ +++RP GPP R+TGI G+ + ++E G +L A V FE+
Sbjct: 264 GLQWPALIQALALRPNGPPDFRLTGI-----GYSLTD-IQEVGWKLGQLASTIGVNFEFK 317
Query: 552 AIA-KRWDTIQLEELKIDRD-EVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHM 609
+IA ++ E L I E + VN ++ LL ++D FL+ I+ I P +
Sbjct: 318 SIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDK----FLSTIKSIRPDI 373
Query: 610 FIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVV 669
+N F+ RF E+L ++S++FD LE P +DR V+ + GR+ LN+V
Sbjct: 374 MTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEG-PPSQDR---VMSELFLGRQILNLV 429
Query: 670 ACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKD-FVIDEDNRW 728
ACEG +RVER ET QW+ R GF + + + K+A+ + D + ++E+
Sbjct: 430 ACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGC 489
Query: 729 LLQGWKGRIIYALSAWK 745
LL GW+ R + A SAW+
Sbjct: 490 LLLGWQTRPLIATSAWR 506
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 445 (161.7 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 114/379 (30%), Positives = 200/379 (52%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGS 431
V L L+ CA+AV ++ A +K++ ++ ++A FA+ L R+
Sbjct: 155 VRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY---- 210
Query: 432 QIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILY 491
+I+ S +IL+ + +CP+ K ++FTAN+ I+ S +H+ID G+
Sbjct: 211 RIHPSAAAIDPSFEEILQMN--FYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQ 268
Query: 492 GFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYN 551
G QWP +Q +++RPGGPP R+TG+ P R E ++E G +LA A+ V F++N
Sbjct: 269 GMQWPALMQALALRPGGPPSFRLTGVG--NPSNR--EGIQELGWKLAQLAQAIGVEFKFN 324
Query: 552 AIA-KRWDTIQLEELKIDRD-EVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHM 609
+ +R ++ + + + E LVVN ++ +L + +++ L ++ + P +
Sbjct: 325 GLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEK----LLATVKAVKPGL 380
Query: 610 FIHGITNGAYNAPFFVTRFREALFHFSAMFDMLE--TIVPREDRERMVIEKDIFGREALN 667
+N F+ RF EAL ++S++FD LE ++P +DR V+ + GR+ LN
Sbjct: 381 VTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDR---VMSEVYLGRQILN 437
Query: 668 VVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVR-SGYHKDFVIDEDN 726
+VA EG +R+ER ET QW+ R AGF + L D K+A+ + SG + ++E++
Sbjct: 438 LVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEEND 497
Query: 727 RWLLQGWKGRIIYALSAWK 745
L+ W+ + + A SAWK
Sbjct: 498 GSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 432 (157.1 bits), Expect = 4.8e-40, P = 4.8e-40
Identities = 116/381 (30%), Positives = 194/381 (50%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGS 431
V L L+ CA+A+ ++ A +KQI + +++A FA+ L R+
Sbjct: 219 VRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSP 278
Query: 432 QIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILY 491
+ ++ S D L+ + + CP+ K ++FTAN+ I+ + R+H+IDF +
Sbjct: 279 P--QNQIDHCLS--DTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQ 332
Query: 492 GFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEY- 550
G QWP +Q +++R GGPP R+TGI P P ++ + E G +LA A+ +V FEY
Sbjct: 333 GLQWPALMQALALREGGPPTFRLTGIGPPAPD--NSDHLHEVGCKLAQLAEAIHVEFEYR 390
Query: 551 ----NAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKIN 606
N++A D LE L+ E + VN ++ LL ++ L +++I
Sbjct: 391 GFVANSLADL-DASMLE-LRPSDTEAVAVNSVFELHKLLGRPGGIEK----VLGVVKQIK 444
Query: 607 PHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREAL 666
P +F +N P F+ RF E+L ++S +FD LE + +D+ V+ + G++
Sbjct: 445 PVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDK---VMSEVYLGKQIC 501
Query: 667 NVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYH--KDFVIDE 724
N+VACEG +RVER ET QW R +G L + K+A+ + S ++ + + ++E
Sbjct: 502 NLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQAS-MLLSVFNSGQGYRVEE 560
Query: 725 DNRWLLQGWKGRIIYALSAWK 745
N L+ GW R + SAWK
Sbjct: 561 SNGCLMLGWHTRPLITTSAWK 581
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 265 (98.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 61/212 (28%), Positives = 107/212 (50%)
Query: 377 LLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKG 436
LL+ CA VA+ ++A+ L+Q+ +SP GD QR+A F + L R+ + +YK
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 437 F--VNKRTS-AADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGF 493
RT+ ++ + +L+ P K+S N+ I+ + +H+ID
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 494 QWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAI 553
QW +Q + RP GPP LRITG+ + E +E+ RL + A+ ++PF++N +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVHHQK------EVLEQMAHRLIEEAEKLDIPFQFNPV 230
Query: 554 AKRWDTIQLEELKIDRDEVLVVNCLYRAKNLL 585
R D + +E+L++ E L V+ + + L
Sbjct: 231 VSRLDCLNVEQLRVKTGEALAVSSVLQLHTFL 262
Score = 233 (87.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 52/149 (34%), Positives = 88/149 (59%)
Query: 598 FLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIE 657
FLN I ++P + + + +N + R E+L+ ++A+FD LET VPR ++R+ +E
Sbjct: 332 FLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVE 391
Query: 658 KDIFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYH 717
K +FG E N+++CEG+ER ER E ++W R AGF +PL + +A R+ G
Sbjct: 392 KMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQAR-RLLQGCG 450
Query: 718 KD-FVIDEDNRWLLQGWKGRIIYALSAWK 745
D + I E++ + W+ R +Y++SAW+
Sbjct: 451 FDGYRIKEESGCAVICWQDRPLYSVSAWR 479
Score = 46 (21.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 80 AVLRYINQMLMEEDIEEKNCMLQESLDLQAAEKSFYDVLGKKYPPSPD-HSLTYFHQNGE 138
+VL+ + ++D+ KNC L+ + + VL + + + + NG
Sbjct: 254 SVLQLHTFLASDDDLMRKNCALRFQNNPSGVD--LQRVLMMSHGSAAEARENDMSNNNGY 311
Query: 139 SPDGDTSRNL 148
SP GD++ +L
Sbjct: 312 SPSGDSASSL 321
Score = 41 (19.5 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 139 SPDGDTSRNLHGY 151
SPDGDT + + Y
Sbjct: 85 SPDGDTMQRIAAY 97
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 337 (123.7 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 93/320 (29%), Positives = 155/320 (48%)
Query: 441 RTSAADILKAYQLYL-AACPFRKLSNFTANKTIMSLAQNSMR--LHIIDFGILYGFQWPT 497
+ + +D Y L+L PF + + TAN+ I+ + + LHI+D I G QWP
Sbjct: 135 KNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPP 194
Query: 498 FIQRISMR---PGGPP-KLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAI 553
+Q ++ R P PP LRITG G R + TG RL +A + F+++ +
Sbjct: 195 LMQALAERSSNPSSPPPSLRITGC-----G-RDVTGLNRTGDRLTRFADSLGLQFQFHTL 248
Query: 554 A-KRWDT------IQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKIN 606
D I+L L + E + VNC++ + ++ FL+ I+ +N
Sbjct: 249 VIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDD---GDMIGHFLSAIKSLN 305
Query: 607 PHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREAL 666
+ + F+ RF EA+ H+ A+FD LE +P RER+ +E+ FG+E L
Sbjct: 306 SRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEIL 365
Query: 667 NVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKD-FVIDED 725
+VVA E ER +R ++ W+ R GFV +P+ + +A +R Y + + +
Sbjct: 366 DVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFL 425
Query: 726 NRWLLQGWKGRIIYALSAWK 745
N L GW+ R ++++S+WK
Sbjct: 426 NNSLFLGWQNRPLFSVSSWK 445
Score = 74 (31.1 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 374 LRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARL 426
LR LL A V+ + +A L + +SSP GD +RL F L R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 380 (138.8 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 117/382 (30%), Positives = 180/382 (47%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEAR-----L 426
+ L SLL+ CA+ VA D R A L +I + SPFG +R+ FA L+ R L
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 427 AGTGSQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIID 486
+G S + + + + I A Q Y + P K S+FTAN+ I +HIID
Sbjct: 98 SGACSPLSEKPLTV-VQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIID 156
Query: 487 FGILYGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNV 546
++ G QWP ++ RP +RITG G ++ + TGRRLAD+A N+
Sbjct: 157 LDVMQGLQWPALFHILASRPRKLRSIRITGF-----G-SSSDLLASTGRRLADFASSLNL 210
Query: 547 PFEYNAIAKR-WDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNI-FLNFIRK 604
PFE++ I + I +L + E +VV+ + L D T N+ L +R+
Sbjct: 211 PFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQH--RLYDVT-----GNNLETLEILRR 263
Query: 605 INPHMFIHGITNGAYN-APFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGR 663
+ P++ +Y+ F+ RF EAL ++SA+FD L + E ER +E+ + G
Sbjct: 264 LKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGT 323
Query: 664 EALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVID 723
E N+VA G R +R +W+ R GF + L + +A + + +
Sbjct: 324 EIRNIVAHGGGRR-KR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLV 378
Query: 724 EDNRWLLQGWKGRIIYALSAWK 745
E+N L GWK + SAWK
Sbjct: 379 EENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 382 (139.5 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 100/357 (28%), Positives = 173/357 (48%)
Query: 397 LKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLA 456
L +I++ S GD QR+ FA+ L + + S + +S D + +Y+
Sbjct: 195 LIRIKESVSESGDPIQRVGYYFAEALSHKETESPSS------SSSSSLEDFILSYKTLND 248
Query: 457 ACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPP-KLRIT 515
ACP+ K ++ TAN+ I+ S +HI+DFGI G QW +Q ++ R G P ++RI+
Sbjct: 249 ACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRIS 308
Query: 516 GIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVV 575
GI P G P + TG RL D+A ++ FE+ + + ++D DEVLVV
Sbjct: 309 GIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVV 368
Query: 576 NCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHF 635
N + LLDET + L R +NP + G + N F R + +L +
Sbjct: 369 NFMLELYKLLDETATTVGTA---LRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFY 425
Query: 636 SAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEG-----WERVERPETYKQWQVRN 690
SA+F+ LE + R+ +ER+ +E+ +FGR +++V + R E +QW+V
Sbjct: 426 SAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLM 485
Query: 691 LRAGFVQLPLDRDIVKRATDRVRS-GYHKDF-VIDEDNRWLLQGWKGRIIYALSAWK 745
+AGF + V +A + + Y + +++ + ++ W + +S+W+
Sbjct: 486 EKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 381 (139.2 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 119/424 (28%), Positives = 201/424 (47%)
Query: 340 NASSKTVQQKGQSKG-SNGAKGRGKKQSGKKEVVDLRSLLIHCAQAVAADDRRSAHEFLK 398
N S +G ++ + G ++ + +L +LL C A+ + + + + F+
Sbjct: 239 NGSRNPYSHRGATEERTTGNINNNNNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIA 298
Query: 399 QIRQHSSPFGDGNQ-RLAKCFADGLEARLAGTGSQIYKGFVNK---RTSAADILKAYQLY 454
+ +SP G RL + + L R+A I+ + RT + A +
Sbjct: 299 RTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFL 358
Query: 455 LAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPKLRI 514
P K +FTAN+ ++ + R+HIIDF I G QWP+F Q ++ R P +RI
Sbjct: 359 NQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRI 418
Query: 515 TGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLV 574
TGI G E + ETG RL +A+ N+ FE++ + R + ++L L + E +
Sbjct: 419 TGI-----GESKLE-LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVA 472
Query: 575 VNCLYRA-KNLLDETIAVDSSRNIFLNFIRKINPHMFIHGITNGAYNAPFFVTRFREALF 633
VNC+ + K L D T A + R+ FL IR NP + +N+ TR +L
Sbjct: 473 VNCVMQMHKTLYDGTGA--AIRD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLK 529
Query: 634 HFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEGWERVERPETYKQWQVRNLRA 693
++SAMFD + T + + R+ +E+ +FGRE N+VACEG R ER ++ W+ +
Sbjct: 530 YYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQL 589
Query: 694 GFVQLPL-DRDIVK-RATDRVRSGYHKDFV----IDEDNRW-------LLQGWKGRIIYA 740
GF L + +R++++ + R+ ++ F DEDN + W + +Y
Sbjct: 590 GFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYT 649
Query: 741 LSAW 744
+SAW
Sbjct: 650 ISAW 653
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 360 (131.8 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 101/389 (25%), Positives = 171/389 (43%)
Query: 376 SLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYK 435
S+L+ A+A + D A + L + + SSP+GD Q+LA F L R+ G+G + Y+
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYR 204
Query: 436 GFVN-----KRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGIL 490
V K S K + P+ + AN I+ ++HI+D
Sbjct: 205 TMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 491 YGFQWPTFIQRISMRPGGPPKLRITGI----EFPQPGFRPAERVEETGRRLADYAKDFNV 546
+ QWPT ++ ++ R P LR+T + +F ++E G R+ +A+ V
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 547 PFEYNAIAKRWDTIQ--LEELKIDRDEVLVVNCLYRAKNLLDE----TIAVDSSRNIFLN 600
PF++N I D + L EL + DEVL +NC+ + + S R +
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPR 384
Query: 601 FIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDI 660
+ + + G G ++ F + F E L F F+ E PR ER+++E+
Sbjct: 385 IVTVVEEEADLVGEEEGGFDDEF-LRGFGECLRWFRVCFESWEESFPRTSNERLMLERAA 443
Query: 661 FGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDI---VKRATDRVRSGYH 717
GR +++VACE + ER ET ++W R +GF + ++ V+ R + G
Sbjct: 444 -GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVW 502
Query: 718 KDFVIDEDNRWLLQGWKGRIIYALSAWKP 746
V D + W+ + + SAW+P
Sbjct: 503 S-MVQCPDAAGIFLCWRDQPVVWASAWRP 530
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 217 (81.4 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 334 LREALKNASSKTVQQKGQSKGSNGAKGRGK---KQSGKKEVV-----DLRSLLIHCAQAV 385
LR ++SS T G K + G G + G + V R LL+ CA +
Sbjct: 2 LRSLHSSSSSDTDNNSGGCKNNGGGGGEAAAAVEGGGDQRAVAAAAPSTRDLLLACADLL 61
Query: 386 AADDRRSAHEFLKQI-RQHSSPFGDGNQRLAKCFADGLEARL---AGTGSQIYKGFVNKR 441
D +A + + +SP GD RLA FA L R+ AG G + G +
Sbjct: 62 QRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARP 121
Query: 442 TSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQR 501
S+ AY + PF + ++ TAN+ I+ + R+HI+D ++G QWP +Q
Sbjct: 122 ASSG----AYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQA 177
Query: 502 ISMR--PG-GPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAI 553
I+ R P GPP++R+TG + + + TG RL +A+ ++PF + +
Sbjct: 178 IAERADPALGPPEVRVTGAGADR------DTLLRTGNRLRAFARSIHLPFHFTPL 226
Score = 171 (65.3 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 57/194 (29%), Positives = 87/194 (44%)
Query: 565 LKIDRDEVLVVNCLYRAKNLL--DETIAVDSSRNIFLNFIRKINPHMFI------HGITN 616
L+ DE L VNC+ NL DE A FL +++ ++P + G
Sbjct: 258 LEFHPDETLAVNCVMFLHNLAGHDELAA-------FLKWVKAMSPAVVTIAEREAGGGGG 310
Query: 617 GAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEG--- 673
G + R A+ H+SA+F+ LE VP RER+ +E+++ GRE V G
Sbjct: 311 GGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRW 370
Query: 674 WERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKD-FVIDEDNRWLLQG 732
W +ER W AGF PL V +A +R Y + +++ E G
Sbjct: 371 WRGIER------WGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLG 424
Query: 733 WKGRIIYALSAWKP 746
W+ R + ++SAW+P
Sbjct: 425 WQTRPLLSVSAWQP 438
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 318 (117.0 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 103/391 (26%), Positives = 175/391 (44%)
Query: 374 LRSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQI 433
+ LL+HCA A+ ++D H+ L + + P GD QRL F L +R A + +
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSR-AVSKTPT 85
Query: 434 YKGFVNKRTSAADILKAYQLYLAA----CPFRKLSNFTANKTIMSLAQNSMRLHIIDFGI 489
++ A ++ + + LAA P+ + AN I++ + +HI+D +
Sbjct: 86 LSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSL 145
Query: 490 LYGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERV--EETGRRLADYAKDFNVP 547
+ Q PT I ++ R PP L + F P + EE G +L ++A N+
Sbjct: 146 THCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNIT 205
Query: 548 FEYNAIAKRWD---TIQLEELKI---DRDEVLVVNCLYRAKNLLDETIAVDSS--RNIFL 599
E+ + + + L++L+I +E LVVNC + + +E + SS R +FL
Sbjct: 206 MEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFL 265
Query: 600 NFIRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKD 659
+R +NP + + + V R + A +F FD +T + +R E +
Sbjct: 266 KQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAE 322
Query: 660 IFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIV---KRATDRVRSGY 716
I + NVVA EG ERVER ET ++W R A F + + D V K + G+
Sbjct: 323 ISWKIE-NVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGW 381
Query: 717 HKDFVIDEDNRWLLQGWKGRIIYALSAWKPV 747
++D+ L+ WKG + + W P+
Sbjct: 382 --GMKKEDDDESLVLTWKGHSVVFATVWVPI 410
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 338 (124.0 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 104/388 (26%), Positives = 177/388 (45%)
Query: 375 RSLLIHCAQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIY 434
R ++ A A+A A E L ++ Q + + ++L L +R+A +++Y
Sbjct: 266 RQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELY 325
Query: 435 KGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNS----MRLHIIDFGIL 490
+ L + QL P KL AN I+ A N+ M H+IDF I
Sbjct: 326 ---------GKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIG 376
Query: 491 YGFQWPTFIQRISMRPGGP------PKLRITGIEFPQPGFRP----AERVEETGRRLADY 540
G Q+ ++ +S R G P ++IT + G ER++ G L+
Sbjct: 377 EGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQL 436
Query: 541 AKDFNVPFEYNAIAK-RWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFL 599
+ +N + R + E L D DE L VN ++ + DE++ ++ R+ L
Sbjct: 437 GDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELL 496
Query: 600 NFIRKINPHM--FIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIE 657
++ + P + + N + APF + R E+ + A+ + +E+ VP + +R +E
Sbjct: 497 RRVKGLKPRVVTLVEQEMN-SNTAPF-LGRVSESCACYGALLESVESTVPSTNSDRAKVE 554
Query: 658 KDIFGREALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYH 717
+ I GR+ +N VACEG +R+ER E + +W++R AGF +PL I + R + H
Sbjct: 555 EGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR-GNRVH 612
Query: 718 KDFVIDEDNRWLLQGWKGRIIYALSAWK 745
F + EDN + GW GR + SAW+
Sbjct: 613 PGFTVKEDNGGVCFGWMGRALTVASAWR 640
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 309 (113.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 107/395 (27%), Positives = 168/395 (42%)
Query: 362 GKKQSGKKEVVDLRSLLIHCAQAV--AADDRRSAHEFLKQIRQHSSPFGDGN--QRLAKC 417
G+ ++ + + + L LL+ A A A R L +++ SP GD +RLA
Sbjct: 92 GEPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSP-GDRTNMERLAAH 150
Query: 418 FADGLEARLAGTGSQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQ 477
F +GL L + + AD++ A++L P+ TA + I+ +
Sbjct: 151 FTNGLSKLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVK 210
Query: 478 NSMRLHIIDFGILYGFQWPTFIQRISMRPGGPPK--LRITGIEFPQPGFRPAERVEETGR 535
R+HI+D+ I G QW + +Q + R GP LRIT + G + V+ETGR
Sbjct: 211 YERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGR 270
Query: 536 RLADYAKDFNVPFEYNAIAKRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSR 595
RL +A PF Y + LK+ R E +V+NC+ +T SS
Sbjct: 271 RLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQT---PSSV 327
Query: 596 NIFLNFIRKINPHM--FIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRER 653
FL+ + +NP + +H G F+ RF + L FSA+FD LE + + R
Sbjct: 328 ISFLSEAKTLNPKLVTLVHEEV-GLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPAR 386
Query: 654 MVIEKDIFGREALNVVA--CEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDR 711
+E+ G N + VE ++ QW N GF PL+ R +
Sbjct: 387 GFVERVFIGPWVANWLTRITANDAEVESFASWPQWLETN---GFK--PLEVSFTNRCQAK 441
Query: 712 VRSGYHKD-FVIDE-DNRWLLQGWKGRIIYALSAW 744
+ D F ++E L+ GWK R + + S W
Sbjct: 442 LLLSLFNDGFRVEELGQNGLVLGWKSRRLVSASFW 476
Score = 45 (20.9 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 29/114 (25%), Positives = 43/114 (37%)
Query: 39 FLDQRFRDCRYRQPDPTPINVVSSSTVNHEEDSPEDCDFSDAVLRYI-NQMLMEEDIEEK 97
FLD F + P T + S+ ++ D DCDF D + + ++ M E E
Sbjct: 8 FLDLFFST--HTDPLATAASTSSNGYSLNDLDIDWDCDFRDVIESIMGDEGAMMEPESEA 65
Query: 98 NCMLQESLDLQAAEKSFYDVL-GKKY-PPSPDHS--LTYFHQNGESPDGDTSRN 147
ML + L + + V G + P D S L H + D T N
Sbjct: 66 VPMLHDQEGLCNSASTGLSVADGVSFGEPKTDESKGLRLVHLLVAAADASTGAN 119
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 111/434 (25%), Positives = 177/434 (40%)
Query: 328 QSPTVALREALKNASSKTVQQKGQSKGSNGAKGRGKKQS--GKKEVVDLRSLLIHCAQAV 385
Q P R+ + + Q K ++ A +K S G KE LL CA A+
Sbjct: 97 QQPNDQSRKRSHDGFLEAQQVKKSARSKRKAIKSSEKSSKDGNKEGRWAEKLLNPCALAI 156
Query: 386 AADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKRTSAA 445
A + +L + + +S GD N+RLA L+ L+ S + F T A+
Sbjct: 157 TASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSS--SSVSSSFWPVFTFAS 214
Query: 446 DILKAYQLYLA----ACPFRKLSNFTANKTIMS-LAQN---SMRLHIIDFGILYGFQWPT 497
+K +Q L P+ L N AN I+ LAQ+ LHIID G+ +G QWPT
Sbjct: 215 AEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPT 274
Query: 498 FIQRISMR-PGGPPKLRITGIE--FPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIA 554
++ +S R G PP++RIT I F G +L +A+ + + + +
Sbjct: 275 LLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARSLKINLQISVL- 333
Query: 555 KRWDTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFIHGI 614
D +QL + E L+V +R +L +++ R L +R + P +
Sbjct: 334 ---DKLQL--IDTSPHENLIVCAQFRLHHLKH---SINDERGETLKAVRSLRPKGVVLCE 385
Query: 615 TNGAYNAPF-FVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEG 673
NG ++ F F + L + D + E+ E E+ + EA V+ G
Sbjct: 386 NNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSE----ERKLMEGEATKVLMNAG 441
Query: 674 WERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQG- 732
+ E ++W R AGF + D V A +R Y ++ I ++ G
Sbjct: 442 ----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLRK-YDNNWEIRMEDGDTFAGL 496
Query: 733 -WKGRIIYALSAWK 745
WKG + S WK
Sbjct: 497 MWKGEAVSFCSLWK 510
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/200 (31%), Positives = 96/200 (48%)
Query: 494 QWPTFIQRIS--MRPGGPPKLRITGI----EFPQPGFRPAERVEETGRRLADYAKDFNVP 547
Q PT I ++ + PP L++T I EF P EE G +L ++A NV
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGIS-YEELGSKLVNFATTRNVA 60
Query: 548 FEYNAIAKRW-DTIQ--LEELKIDR---DEVLVVNCLYRAKNLLDETIAVDSSRNIFLNF 601
E+ I+ + D + +E+L+ID +E LVVNC + DE I + R++FL
Sbjct: 61 MEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDE-ILTSNLRSVFLKE 119
Query: 602 IRKINPHMFIHGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIF 661
+R +NP + + + + F++R R + +D E + R +R E DI
Sbjct: 120 LRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADIS 179
Query: 662 GREALNVVACEGWERVERPE 681
+ NVVA EG ERVER E
Sbjct: 180 WKID-NVVAKEGAERVERLE 198
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 87/378 (23%), Positives = 154/378 (40%)
Query: 372 VDLRSLLIHCAQAVAADDRRSAHEFLKQIRQH-SSPFGDGNQRLAKCFADGLEARLAGTG 430
V + L+ A+ + +D A L ++ Q SSP G +R A F + L L
Sbjct: 203 VGITEQLVKAAEVIESDTCL-AQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNV- 260
Query: 431 SQIYKGFVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGIL 490
SQ + S + AY+ + P + +NFT+N+ ++ RLHIIDF I
Sbjct: 261 SQTLNPY-----SLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIG 315
Query: 491 YGFQWPTFIQRISMRPGGPP-KLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFE 549
YG QW + +Q + +R P L+IT F P + T L +A + N+ +
Sbjct: 316 YGGQWASLMQELVLRDNAAPLSLKIT--VFASPANHDQLELGFTQDNLKHFASEINISLD 373
Query: 550 YNAIAKRWDTI-QLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPH 608
++ D + + E + VN + A S + L F++ ++P
Sbjct: 374 IQVLSL--DLLGSISWPNSSEKEAVAVNI----------SAASFSHLPLVLRFVKHLSPT 421
Query: 609 MFIHGITNGAYNAPF-FVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALN 667
+ + G F + +L +A+F+ L+ + D + IE+ + E
Sbjct: 422 IIVCS-DRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQK-IERFLIQPEIEK 479
Query: 668 VVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNR 727
+V +ERP WQ L+ GF + +A V+ + F +++ +
Sbjct: 480 LVLDRS-RPIERP--MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHN 536
Query: 728 WLLQGWKGRIIYALSAWK 745
LL W+ + +SAW+
Sbjct: 537 SLLLCWQRTELVGVSAWR 554
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 79/379 (20%), Positives = 162/379 (42%)
Query: 378 LIHCAQAVAADDRRSAHEFLKQIRQH-SSPFGDGNQRLAKCFADGLEARLAGTGSQIYKG 436
LI V +D+ + A L ++ Q SP G QR A F + L + L G+ +
Sbjct: 126 LIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIR- 184
Query: 437 FVNKRTSAADILKAYQLYLAACPFRKLSNFTANKTIM-SLAQNSMR--LHIIDFGILYGF 493
++ + ++A + Y P S+FTAN+ I+ SL+ S +H++DF I +G
Sbjct: 185 -LSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGG 243
Query: 494 QWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYN-A 552
Q+ + ++ I+ + LR+T + + V+E L +A + + F+
Sbjct: 244 QYASLMREITEKSVSGGFLRVTAVVAEECAVE-TRLVKEN---LTQFAAEMKIRFQIEFV 299
Query: 553 IAKRWDTIQLEELKI---DRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHM 609
+ K ++ + + ++ +R VL+ ++R + + + F+N +R+++P +
Sbjct: 300 LMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITD----------FVNNLRRVSPKV 349
Query: 610 FIHGITNG---AYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREAL 666
+ + G + F F AL ++ + + L+ P D + ++E + R +
Sbjct: 350 VVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVL-RPKI 408
Query: 667 NVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDN 726
+ +R E W+ AG + L + +A + + F + +
Sbjct: 409 SAAVETAADRRHTGEM--TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQ 466
Query: 727 RWLLQGWKGRIIYALSAWK 745
L+ W GR + A SAW+
Sbjct: 467 GELVLCWHGRALVATSAWR 485
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 174 (66.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 83/383 (21%), Positives = 160/383 (41%)
Query: 378 LIHCAQAVAADDRRSAHEFLKQIRQH-SSPFGDGNQRLAKCFADGLEARLAGTGSQIYKG 436
LI + +D+ AH L Q+ Q + G QR A F + L + L GT
Sbjct: 103 LIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNR----- 157
Query: 437 FVNKRTSAADI---LKAYQLYLAACPFRKLSNFTANKTIM-SLAQNSMR--LHIIDFGIL 490
N+ S +DI ++A + + P S+FTAN+ I+ SL+ S +H++DF I
Sbjct: 158 --NQLFSWSDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIG 215
Query: 491 YGFQWPTFIQRISMRPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEY 550
+G Q+ + ++ I+ + LR+T + V+E L +A + + F+
Sbjct: 216 FGGQYASLMREIAEKSANGGFLRVTAVVAEDCAVE-TRLVKEN---LTQFAAEMKIRFQI 271
Query: 551 N-AIAKRWDTIQLEELKI---DRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKIN 606
+ K ++ + + ++ +R VL+ ++R I + F+N + +++
Sbjct: 272 EFVLMKTFEILSFKAIRFVDGERTVVLISPAIFR------RVIGIAE----FVNNLGRVS 321
Query: 607 PHMFI----HGITNGAYNAPFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFG 662
P++ + G T A + F F A ++ + + L+ P D + ++E +
Sbjct: 322 PNVVVFVDSEGCTETAGSGSFR-REFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLL- 379
Query: 663 REALNVVACEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVI 722
R ++ R R W+ AG + L + +A + + F +
Sbjct: 380 RPKISAAVETAANR--RSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHV 437
Query: 723 DEDNRWLLQGWKGRIIYALSAWK 745
+ L+ W GR + A SAW+
Sbjct: 438 AKRQGELVLCWHGRALVATSAWR 460
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 83/375 (22%), Positives = 154/375 (41%)
Query: 382 AQAVAADDRRSAHEFLKQIRQHSSPFGDGNQRLAKCFADGLEARLAGTGSQIYKGFVNKR 441
AQ + A R + H L H SPF QR A A+ L + + S +
Sbjct: 293 AQGILA--RLNHH--LNTSSNHKSPF----QRAASHIAEALLSLIHNESSP---PLITPE 341
Query: 442 TSAADILKAYQLYLAACPFRKLSNFTANKTIMSLAQNSM--RLHIIDFGILYGFQWPTFI 499
I AY+ + PF + NFTAN++I+ S R+HIIDF + YG QW + +
Sbjct: 342 NLILRIA-AYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLM 400
Query: 500 QRISMRPGGPPKLRITGIEF----PQPGFRPAE-RVEETGRRLADYAKDFNVPFEYNAIA 554
Q ++ GG + R + ++ P P E + T L +A + +PFE ++
Sbjct: 401 QELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLS 460
Query: 555 KRW---DTIQLEELKIDRDEVLVVNCLYRAKNLLDETIAVDSSRNIFLNFIRKINPHMFI 611
L+ E + VN L + L F+++++P++ +
Sbjct: 461 VELLLNPAYWPLSLRSSEKEAIAVN--------LPVNSVASGYLPLILRFLKQLSPNIVV 512
Query: 612 HGITNGAYN-APFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVA 670
N APF +H S +LE++ ++++ IE+ + + ++ +
Sbjct: 513 CSDRGCDRNDAPFPNAVIHSLQYHTS----LLESLDANQNQDDSSIER-FWVQPSIEKLL 567
Query: 671 CEGWERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLL 730
+ +ER W++ + GF L + +A ++ + F +++ L+
Sbjct: 568 MKRHRWIERSPP---WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLV 624
Query: 731 QGWKGRIIYALSAWK 745
W+ + + +SAWK
Sbjct: 625 MCWQRKELVTVSAWK 639
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 74/314 (23%), Positives = 138/314 (43%)
Query: 448 LKAYQLYLAACPFRKLSNFTANKTIMSLAQNSMRLHIIDFGILYGFQWPTFIQRIS---M 504
+ AY+ + PF + NFTAN+TI+ + R+HI+DF I YG QW + IQ ++
Sbjct: 327 IAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRN 386
Query: 505 RPGGPPKLRITGIEFPQPGFRPAERVEETGRRLADYAKDFNVPFEYNAIAKRWDTIQLEE 564
R P L+IT P E + T L +A + V FE I+L
Sbjct: 387 RSSSAPSLKITAFASPSTVSDEFE-LRFTEENLRSFAGETGVSFE----------IELLN 435
Query: 565 LKIDRDEVLVVNCLYRAKNLLDETIAVD---SSR-----NIFLNFIRKINPHMFIHGITN 616
++I + L+R+ E IAV+ SS + L F+++I+P++ + +
Sbjct: 436 MEILLNPTYWPLSLFRSSE--KEAIAVNLPISSMVSGYLPLILRFLKQISPNVVVCSDRS 493
Query: 617 GAYN--APFFVTRFREALFHFSAMFDMLETIVPREDRERMVIEKDIFGREALNVVACEGW 674
N APF AL +++++ + L++ IE+ + ++ + +
Sbjct: 494 CDRNNDAPF-PNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCV-QPSIQKLLTNRY 551
Query: 675 ERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDE---DNRWLLQ 731
+ER W+ + GF + L + +A ++ + F +++ + L+
Sbjct: 552 RWMERSPP---WRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVL 608
Query: 732 GWKGRIIYALSAWK 745
W+ + + +SAWK
Sbjct: 609 CWQRKELVTVSAWK 622
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 675 ERVERPETYKQWQVRNLRAGFVQLPLDRDIVKRATDRVRSGYHKDFVIDEDNRWLLQGWK 734
ERVER E +W++R AGF Q PL V + Y + + + E + +L GWK
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLS-SYVNSVIKSLMRCYSEHYTLVEKDGAMLLGWK 60
Query: 735 GRIIYALSAW 744
R + + SAW
Sbjct: 61 KRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 747 716 0.00084 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 628 (67 KB)
Total size of DFA: 390 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.82u 0.14s 62.96t Elapsed: 00:00:03
Total cpu time: 62.83u 0.14s 62.97t Elapsed: 00:00:03
Start: Mon May 20 17:31:40 2013 End: Mon May 20 17:31:43 2013