BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004523
(747 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55FD6|Y8158_DICDI PHD finger-containing protein DDB_G0268158 OS=Dictyostelium
discoideum GN=DDB_G0268158 PE=4 SV=1
Length = 688
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 28/183 (15%)
Query: 70 DWNEDEDSERVDKDENYFAVCAICDDGGDVTFCDGRCLRSFHATITAGKNALCQSLGYTQ 129
+ N+D+ +R K+E AVC C+ G++ CDG CLRSFH + +N S
Sbjct: 122 ETNDDDKPKRPRKNE---AVCTFCEKPGELLMCDGLCLRSFHISCLKARNLYNPSSSSIS 178
Query: 130 --AQIDAVPNFLCQNCVYQEHQCFAC---GMLGSSDKSSSQEVFPCVSATCGQFYHPECV 184
ID + C +CV ++ CF+C G++G ++ C CG+FYH +CV
Sbjct: 179 PVTTIDGTVRWECNDCVSSQNSCFSCKKRGIIGI-------DLMKCKVHQCGKFYHYKCV 231
Query: 185 SKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHR 244
+ + LA+ + + F CP+H C VC+ S D Q C RCP AYH
Sbjct: 232 A------DYKLAKLINTKTPR---FNCPLHYCSVCEVSGDGK----QSVHCFRCPTAYHV 278
Query: 245 KCL 247
C+
Sbjct: 279 ICM 281
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 38/160 (23%)
Query: 88 AVCAICDDGGD-VTFCDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVP--NFLCQNCV 144
VC +C+ GD + C+G C R FH + LG T AVP +F C+ C
Sbjct: 702 TVCQVCEKAGDCLVACEGECCRHFHV----------ECLGLT-----AVPEGHFTCEECE 746
Query: 145 YQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIA 204
+H CF+C K S ++V C + CG+FYH CV K ES
Sbjct: 747 TGQHPCFSC-------KVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFES---------- 789
Query: 205 AGESFTCPVHKCFVCQQSEDMN-VEDLQLAICRRCPKAYH 243
+ F CP H C C +D++ ++ C RCP AYH
Sbjct: 790 --KGFRCPQHCCSSCSMEKDIHKASKGRMMRCLRCPVAYH 827
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 44/196 (22%)
Query: 60 RTTEKPKVIVDWNEDED-----SERVDKDENYFA-----VCAICDDGGDVTFCDGRCLRS 109
RT PK I++ + D S+++ + A VC C+ G++ C+ +C +
Sbjct: 1404 RTAASPKEILEEGVEHDPGMSASKKLQVERGGGAALKENVCQNCEKLGELLLCEAQCCGA 1463
Query: 110 FHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQEHQCFACGMLGSSDKSSSQEVFP 169
FH + LG + F+C C H CF C K S ++V
Sbjct: 1464 FH----------LECLGLPEMPRG---KFICNECHTGIHTCFVC-------KQSGEDVKR 1503
Query: 170 CVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNV-- 227
C+ CG+FYH ECV K +P + + F CP+H C C + NV
Sbjct: 1504 CLLPLCGKFYHEECVQK--YPPT----------VTQNKGFRCPLHICITCHAANPANVSA 1551
Query: 228 EDLQLAICRRCPKAYH 243
+L C RCP AYH
Sbjct: 1552 SKGRLMRCVRCPVAYH 1567
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 23/104 (22%)
Query: 144 VYQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERI 203
+E+ C C LG E+ C + CG F H EC+ L E R +
Sbjct: 1438 ALKENVCQNCEKLG--------ELLLCEAQCCGAF-HLECLG---------LPEMPRGKF 1479
Query: 204 AAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
E T +H CFVC+QS ED++ + C K YH +C+
Sbjct: 1480 ICNECHTG-IHTCFVCKQS----GEDVKRCLLPLCGKFYHEECV 1518
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 34/105 (32%)
Query: 146 QEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAA 205
+E +CF+CG G ++ C C + YH +C++ P A
Sbjct: 2015 REDECFSCGDAG--------QLVSCKKPGCPKVYHADCLNLTKRP--------------A 2052
Query: 206 GESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAY---HRKCL 247
G+ + CP H+C VC + + C CP ++ HR+ +
Sbjct: 2053 GK-WECPWHQCDVCGKE--------AASFCEMCPSSFCKQHREGM 2088
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 70/189 (37%), Gaps = 39/189 (20%)
Query: 62 TEKPKVIVDWNEDEDSERVDKDENYFA-----VCAICDDGGDVTFCDGRCLRSFHATITA 116
+E P D + E S K E A VC +C+ G + C+G C +FH
Sbjct: 637 SESPYESADETQTEASVSSKKSERGMAAKKEYVCQLCEKTGSLLLCEGPCCGAFHLAC-- 694
Query: 117 GKNALCQSLGYTQAQIDAVPNFLCQNCVYQEHQCFACGMLGSSDKSSSQEVFPCVSATCG 176
LG ++ F C C H CF C K S EV CV CG
Sbjct: 695 --------LGLSRRPEG---RFTCTECASGIHSCFVC-------KESKMEVKRCVVNQCG 736
Query: 177 QFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNVE--DLQLAI 234
+FYH CV K ES F CP+H C C S N ++
Sbjct: 737 KFYHEACVKKYPLTVFES------------RGFRCPLHSCMSCHASNPSNPRPSKGKMMR 784
Query: 235 CRRCPKAYH 243
C RCP AYH
Sbjct: 785 CVRCPVAYH 793
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 44/196 (22%)
Query: 60 RTTEKPKVIVDWNEDED-----SERVDKDENYFA-----VCAICDDGGDVTFCDGRCLRS 109
RT PK V+ + D S+++ + A VC C+ G++ C+ +C +
Sbjct: 1506 RTATSPKETVEEGVEHDPGMPASKKMQGERGGGAALKENVCQNCEKLGELLLCEAQCCGA 1565
Query: 110 FHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQEHQCFACGMLGSSDKSSSQEVFP 169
FH + LG T+ F+C C H CF C K S ++V
Sbjct: 1566 FHL----------ECLGLTEMPRG---KFICNECRTGIHTCFVC-------KQSGEDVKR 1605
Query: 170 CVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNV-- 227
C+ CG+FYH ECV K +P + + F C +H C C + NV
Sbjct: 1606 CLLPLCGKFYHEECVQK--YPPT----------VMQNKGFRCSLHICITCHAANPANVSA 1653
Query: 228 EDLQLAICRRCPKAYH 243
+L C RCP AYH
Sbjct: 1654 SKGRLMRCVRCPVAYH 1669
Score = 39.7 bits (91), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 23/104 (22%)
Query: 144 VYQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERI 203
+E+ C C LG E+ C + CG F H EC+ P + + E R I
Sbjct: 1540 ALKENVCQNCEKLG--------ELLLCEAQCCGAF-HLECLGLTEMPRGKFICNECRTGI 1590
Query: 204 AAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
H CFVC+QS ED++ + C K YH +C+
Sbjct: 1591 ----------HTCFVCKQSG----EDVKRCLLPLCGKFYHEECV 1620
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 34/105 (32%)
Query: 146 QEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAA 205
+E +CF+CG G ++ C C + YH +C++ P A
Sbjct: 2117 REDECFSCGDAG--------QLVSCKKPGCPKVYHADCLNLTKRP--------------A 2154
Query: 206 GESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAY---HRKCL 247
G+ + CP H+C +C + + C CP ++ HR+ +
Sbjct: 2155 GK-WECPWHQCDICGKE--------AASFCEMCPSSFCKQHREGM 2190
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 69/160 (43%), Gaps = 38/160 (23%)
Query: 88 AVCAICDDGGDVTF-CDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVPN--FLCQNCV 144
VC IC+ GD C+G C + FH + LG + ++P+ F+C C
Sbjct: 702 TVCQICESSGDSLIPCEGECCKHFHL----------ECLG-----LASLPDSKFICMECK 746
Query: 145 YQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIA 204
+H CF+C K S ++V C CG+FYH CV K ES
Sbjct: 747 TGQHPCFSC-------KVSGKDVKRCSVGACGKFYHEACVRKFPTAIFES---------- 789
Query: 205 AGESFTCPVHKCFVCQQSEDMN-VEDLQLAICRRCPKAYH 243
+ F CP H C C +D++ ++ C RCP AYH
Sbjct: 790 --KGFRCPQHCCSACSMEKDIHKASKGRMMRCLRCPVAYH 827
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 60/157 (38%), Gaps = 34/157 (21%)
Query: 89 VCAICDDGGDVTFCDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQEH 148
VC +C+ G + C+G C +FH LG ++ F C C H
Sbjct: 669 VCQLCEKPGSLLLCEGPCCGAFHLAC----------LGLSRRPEG---RFTCSECASGIH 715
Query: 149 QCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGES 208
CF C K S +V CV CG+FYH CV K ES
Sbjct: 716 SCFVC-------KESKTDVKRCVVTQCGKFYHEACVKKYPLTVFES------------RG 756
Query: 209 FTCPVHKCFVCQQSEDMNVE--DLQLAICRRCPKAYH 243
F CP+H C C S N ++ C RCP AYH
Sbjct: 757 FRCPLHSCVSCHASNPSNPRPSKGKMMRCVRCPVAYH 793
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3
PE=1 SV=3
Length = 4911
Score = 40.0 bits (92), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 34/163 (20%)
Query: 90 CAICDD-GGDVTFCDGRCLRSFHATITAGKNALCQSLGYT----QAQIDAVPNFLCQNCV 144
CA C G + C+ +C + +H AG Q + ID P
Sbjct: 285 CAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTF-QDFSHIFLLCPEHIDQAPER-----S 338
Query: 145 YQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIA 204
++ C C G + F C TCGQ YH C+ + P +
Sbjct: 339 KEDANCAVCDSPGDL-----LDQFFCT--TCGQHYHGMCLDIAVTPLKRA---------- 381
Query: 205 AGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
+ CP +C VCQ + ED ++ +C C K YH CL
Sbjct: 382 ---GWQCP--ECKVCQNCKQSG-EDSKMLVCDTCDKGYHTFCL 418
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 20/98 (20%)
Query: 150 CFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESF 209
C CG G + + + C + CGQ YHP CVS + ++ + +
Sbjct: 960 CVVCGSFG---QGAEGRLLAC--SQCGQCYHPYCVSIKI------------TKVVLSKGW 1002
Query: 210 TCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
C +C VC+ + +L +C C +YH CL
Sbjct: 1003 RC--LECTVCEACGKA-TDPGRLLLCDDCDISYHTYCL 1037
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3
PE=2 SV=2
Length = 4903
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 34/163 (20%)
Query: 90 CAICDD-GGDVTFCDGRCLRSFHATITAGKNALCQSLGY----TQAQIDAVPNFLCQNCV 144
CA C G + C+ +C + +H AG Q + ID P
Sbjct: 284 CAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTF-QDFSHFFLLCPEHIDQAPER-----S 337
Query: 145 YQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIA 204
++ C C G + F C TCGQ YH C+ + P +
Sbjct: 338 KEDANCAVCDSPGDL-----LDQFFCT--TCGQHYHGMCLDIAVTPLKRA---------- 380
Query: 205 AGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
+ CP +C VCQ + ED ++ +C C K YH CL
Sbjct: 381 ---GWQCP--ECKVCQNCKQSG-EDSKMLVCDTCDKGYHTFCL 417
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 144 VYQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERI 203
Q+ C CG G + + + C + CGQ YHP CVS + ++
Sbjct: 947 TLQQDMCVVCGSFG---QGAEGRLLAC--SQCGQCYHPYCVSIKI------------TKV 989
Query: 204 AAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
+ + C +C VC+ + +L +C C +YH CL
Sbjct: 990 VLSKGWRC--LECTVCEACGKA-TDPGRLLLCDDCDISYHTYCL 1030
>sp|Q5XHZ2|SYCE1_RAT Synaptonemal complex central element protein 1 OS=Rattus norvegicus
GN=Syce1 PE=2 SV=2
Length = 329
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Query: 42 LLSFMANHPETNTFHEDVRTTEKPKVIVDWNEDEDSERVDKDENYFA---------VCAI 92
L + M+ H +T FH+ TE+ V+ D E++ K+E +CA+
Sbjct: 164 LETLMSQHKDTMEFHKPEHLTEEMSVL-----DSSKEQLLKEEKLIKAKLEDVQHRLCAL 218
Query: 93 CDDGGDVTFCDGRCLRSFHAT 113
C G TF DG LRS A
Sbjct: 219 CGPEGSSTFSDGLFLRSHEAA 239
>sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis
thaliana GN=NERD PE=1 SV=3
Length = 1773
Score = 36.6 bits (83), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 89 VCAICDDGGDVTFCDGR-CLRSFHATITAGKNALCQSLG------YTQAQIDAVPNFLCQ 141
VC +C DGGD+ CD R C +++H + A Q+ G + ++ + +LC
Sbjct: 601 VCFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFFQTKGKWNCGWHLCSKCEKTATYLCY 660
Query: 142 NCVYQEHQCFAC 153
C++ C C
Sbjct: 661 TCMF--SLCKGC 670
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2
PE=1 SV=2
Length = 5537
Score = 35.8 bits (81), Expect = 1.2, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 18/82 (21%)
Query: 166 EVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDM 225
++F C S CG YH C L L R AG + CP +C VCQ
Sbjct: 240 DLFFCTS--CGHHYHGAC-----------LDTALTARKRAG--WQCP--ECKVCQACRKP 282
Query: 226 NVEDLQLAICRRCPKAYHRKCL 247
D ++ +C C K YH CL
Sbjct: 283 G-NDSKMLVCETCDKGYHTFCL 303
Score = 35.4 bits (80), Expect = 1.7, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 35/116 (30%)
Query: 148 HQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVS-----------KLLHPDNESLA 196
+C C LG+S PC S C + YH C + +LL P++ A
Sbjct: 170 QRCSHCTRLGAS--------IPCRSPGCPRLYHFPCATASGSFLSMKTLQLLCPEHSEGA 221
Query: 197 EELRERIAAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCLPTEIT 252
L E +C VC+ ++ L C C YH CL T +T
Sbjct: 222 AYLEEA------------RCAVCEGPGEL----CDLFFCTSCGHHYHGACLDTALT 261
Score = 35.4 bits (80), Expect = 1.9, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 144 VYQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERI 203
V + C CG G + + + C + C Q YHP CV N + + + +
Sbjct: 1374 VLMQDMCVVCGSFG---RGAEGHLLAC--SQCSQCYHPYCV-------NSKITKVM--LL 1419
Query: 204 AAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
C V C VC Q+ D + +L +C C +YH CL
Sbjct: 1420 KGWRCVECIV--CEVCGQASDPS----RLLLCDDCDISYHTYCL 1457
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2
PE=1 SV=2
Length = 5588
Score = 35.8 bits (81), Expect = 1.4, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 35/116 (30%)
Query: 148 HQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVS-----------KLLHPDNESLA 196
+C C G+S PC S C + YH C + +LL P++ A
Sbjct: 170 QRCSHCARFGAS--------VPCRSPGCSRLYHFPCATASGSFLSMKTLQLLCPEHSDGA 221
Query: 197 EELRERIAAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCLPTEIT 252
L E +C VC+ + L C C YH CL T +T
Sbjct: 222 AHLEEA------------RCAVCEGPGQL----CDLLFCTSCGHHYHGACLDTALT 261
Score = 35.4 bits (80), Expect = 1.5, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 16/74 (21%)
Query: 174 TCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNVEDLQLA 233
+CG YH C+ L R+R S+ CP +C VCQ D ++
Sbjct: 246 SCGHHYHGACLDTAL---------TARKR----ASWQCP--ECKVCQSCRKPG-NDSKML 289
Query: 234 ICRRCPKAYHRKCL 247
+C C K YH CL
Sbjct: 290 VCETCDKGYHTFCL 303
Score = 35.4 bits (80), Expect = 1.6, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 144 VYQEHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERI 203
V + C CG G + + + C + C Q YHP CV N + + + +
Sbjct: 1330 VLMQDMCVVCGSFG---RGAEGHLLAC--SQCSQCYHPYCV-------NSKITKVM--LL 1375
Query: 204 AAGESFTCPVHKCFVCQQSEDMNVEDLQLAICRRCPKAYHRKCL 247
C V C VC Q+ D + +L +C C +YH CL
Sbjct: 1376 KGWRCVECIV--CEVCGQASDPS----RLLLCDDCDISYHTYCL 1413
>sp|Q6Z3U3|Y7797_ORYSJ B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp.
japonica GN=Os07g0679700 PE=2 SV=1
Length = 949
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 46/271 (16%)
Query: 235 CRRCPKAYHRKCLPTEITFSDADENNFQRAWVDLLPNNRILIYCLEHKIISELKTPARDH 294
C C K H C+ ++ +F D Q + C+++ + + +P
Sbjct: 75 CSFCGKRLHCGCIASKNSFDLLDSGGVQ------------CVTCIKNSAVQSVPSPVVPK 122
Query: 295 LKFPGVEGKRKKEDLELLLTEEKDVASKRNIVSESFVADK-----TVVKKLKLAEVYSGA 349
L F +R L + D+ S R + + S + D T++ K L +
Sbjct: 123 L-FSSQNNQR-------LFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNV 174
Query: 350 DVGMSNSEIKKR----WPRQDVHSLKKPNITDTGRKSLKDIADKSKPSLRKDSTLLKSRS 405
+ G S++ ++++ RQ L +I D GR P L + + L+SR
Sbjct: 175 EAGQSSNILRQKELENGARQIKWELPTLSIGDMGRI----------PFLTRSQSALESRR 224
Query: 406 FVVK-PGHRNIDGSKMKNSISDRRRMKKVNISQPSVDAEMEKELLALIKDSTSSFNEEEF 464
K P + + + + N ++ + +E+ +L+ T+ F E
Sbjct: 225 DENKDPTTESTTSESLSEACLNMSLGIASNGNKLEATSTVERPMLS----PTTGFPEGRE 280
Query: 465 MKSHIVPITHAHHSKHLLEKSITLGLVEGSV 495
+ + + P HA ++H L + +G EG+V
Sbjct: 281 LTTALSPFQHAQRARHFLTRPPRVG--EGAV 309
>sp|Q8MT36|MES4_DROME Probable histone-lysine N-methyltransferase Mes-4 OS=Drosophila
melanogaster GN=Mes-4 PE=1 SV=2
Length = 1427
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 32/132 (24%)
Query: 137 NFLCQNC-VYQEHQCFACGMLGS--------SDKSSSQ-----EVFPCVSATCGQFYHPE 182
+ +C C V + C C + S + SSS ++ C CG+ +H
Sbjct: 853 SLVCHECNVGEPEGCVICHQVESPAVPSTPRKEDSSSHTPIEDKLLTCSQPMCGKRFHTS 912
Query: 183 CVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSED----MNVEDLQLAICRRC 238
C P S R CP H C C + + +LA C RC
Sbjct: 913 CCK--YWPQASSSKHSAR----------CPRHVCHTCVSDDPSGKFQQLGSSKLAKCVRC 960
Query: 239 PKAYHR--KCLP 248
P YH+ KC+P
Sbjct: 961 PATYHQLSKCIP 972
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 90 CAICDDGGDVTFCDGRCLRSFH 111
CA+C DGG++ CDG C R+FH
Sbjct: 301 CAVCHDGGELICCDG-CPRAFH 321
>sp|A3M022|MED5_PICST Mediator of RNA polymerase II transcription subunit 5
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=NUT1 PE=3 SV=2
Length = 981
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 4 YLFCSSYEVEPSENDLLDHMPISREAAERDKDLANSKFLLSFMANHPETNTFHEDVRTTE 63
Y + E+ + ND++D M ISRE + + + LLS M+N TN +
Sbjct: 462 YSYSRQIELSNAINDIIDEMKISREHEKLN------RLLLSVMSNVQLTNI----LVFNS 511
Query: 64 KPKVI----VDWNEDEDSERVDKDENYFAVCAIC 93
P V+ +D+ + E+ D DEN+ V + C
Sbjct: 512 NPYVVLGKMIDYIDSENFRIDDDDENFQDVYSYC 545
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 90 CAICDDGGDVTFCDGRCLRSFH 111
CA+C DGG++ CDG C R+FH
Sbjct: 299 CAVCRDGGELICCDG-CPRAFH 319
>sp|Q8U1R6|PUS10_PYRFU tRNA pseudouridine synthase Pus10 OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pus10 PE=1
SV=1
Length = 388
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 28/150 (18%)
Query: 228 EDLQLAICRRCPKAYHRKCLPTEITFSDADENNFQRAWVDLLPNNRILIYCLEHKIISEL 287
E + ICR K +H KC+ D D V +L N R + E+
Sbjct: 183 ESIATIICRAFKKHFHGKCIFKGAGREDVD--------VRMLGNGR--------PFVVEI 226
Query: 288 KTPARDHLKFPGVE------GKRKKEDLELLLTEEKD--VASKRNIVSESFVADKTVVKK 339
K P + + +E GK + +L + EE + + ++ V E+ V K + K
Sbjct: 227 KRPRKRKVNLKDIEEEINQSGKVEVLNLRFITPEEAERILTTRHRKVYEAIVYVKDGITK 286
Query: 340 LKLAEVYSGADVGMSNSEIKKRWPRQDVHS 369
++ +V + N+EIK+R PR+ ++S
Sbjct: 287 EEVEKVVK----SLKNAEIKQRTPRRVLNS 312
>sp|O69300|LON_CAMJE Lon protease OS=Campylobacter jejuni subsp. jejuni serotype O:2
(strain NCTC 11168) GN=lon PE=2 SV=2
Length = 791
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 525 QIFQWKRKLDVYLAPFLHGMRYTSFGRHFTKVEKLKEIVDRLHWYVRSGDTIVDFCCGAN 584
++ +++++L++ F+H Y + K E R+H I + A
Sbjct: 249 EVREYQKRLELK-KKFMHEDAYKEIKKQIEKFE-------RIHQDNSEASMIQTYIETAL 300
Query: 585 D--FSCMMKVKLE--QMGKSCSFRNYDLIQPKNDFS--FEKRDWMTVRPEELPDGSQLIM 638
D F + K KL+ ++ K + +Y L +PK F R+ + R DG+++I+
Sbjct: 301 DIPFEKISKKKLDIKEVSKQLNHDHYALNKPKERIEEYFAVRELLEKRKIAEKDGAKVIL 360
Query: 639 GLNPPFGV-KASLANKFISQALK 660
L P GV K SLAN +S+ALK
Sbjct: 361 CLYGPPGVGKTSLANS-VSKALK 382
>sp|Q5UQR0|DPOL_MIMIV DNA polymerase OS=Acanthamoeba polyphaga mimivirus GN=POLB PE=3
SV=1
Length = 1740
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 363 PRQDVHSLKKPNITDTG-RKSLKDIADKSKPSLRKDSTLLKSRSFVVKPG-------HRN 414
P+++ H + ITD + LKDI DK + +++++ + + H+N
Sbjct: 768 PQKEYHRFAQEIITDEQINRELKDIFDKINTVFENNVAIIQNQKYFTEKNISELIDKHKN 827
Query: 415 IDGSKMKN-----SISDRRRMKKVNISQPSVDAEM 444
I SK+++ S+SD+R+ K V+ + S+D +
Sbjct: 828 ISDSKIEDIEFDESLSDKRKNKLVDAEKDSLDKNI 862
>sp|A4IWC4|CH60_FRATW 60 kDa chaperonin OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=groL PE=3 SV=1
Length = 544
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 369 SLKKPNITDTGRKSLKDIADKSKPSLRKDSTLLK------------SRSFVVKPGHRNID 416
++K P D + L+DIA + + + +K SR V K ID
Sbjct: 275 AVKAPGFGDRRKAMLEDIATLTGATFVSEDLSMKLEETNMEHLGTASRVLVTKDNTTIID 334
Query: 417 GSKMKNSISDRRRMKKVNISQPSVDAEMEK--ELLALIKDSTSSFN----EEEFMKSHIV 470
G+ K +I+ R + K NI++ + D + EK E LA + + E MK
Sbjct: 335 GAGEKEAIAKRINVIKANIAEANSDYDREKLQERLAKLSGGVAVIKVGAVTEAEMKEKKD 394
Query: 471 PITHA-HHSKHLLEKSITLGLVEGSVKAVRA--ALEMLDGGCD 510
+ A H ++ +E+ I G G V +RA AL+ L G D
Sbjct: 395 RVDDALHATRAAVEEGIVAG---GGVALIRAQKALDGLTGEND 434
>sp|Q9XTJ4|NHR3_CAEEL Nuclear hormone receptor family member nhr-3 OS=Caenorhabditis
elegans GN=nhr-3 PE=2 SV=1
Length = 463
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 14/82 (17%)
Query: 80 VDKDENYFAVCAICDDGGD-----VTFCDGRCLRSFHATITAGKNALCQSLGYT-QAQID 133
+D +E+ +C++C D V C G C F T+ AGKN +C+ Y+ + +ID
Sbjct: 45 IDGEES--TICSVCCDEASGRHYGVVACFG-CKGFFRRTVRAGKNYVCR---YSKKCRID 98
Query: 134 AVPNFLCQNCVYQEHQCFACGM 155
+C++C +Q +C GM
Sbjct: 99 KAGRNVCRSCRFQ--KCLEVGM 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 291,418,400
Number of Sequences: 539616
Number of extensions: 12762271
Number of successful extensions: 32585
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 32444
Number of HSP's gapped (non-prelim): 150
length of query: 747
length of database: 191,569,459
effective HSP length: 125
effective length of query: 622
effective length of database: 124,117,459
effective search space: 77201059498
effective search space used: 77201059498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)