Query 004530
Match_columns 746
No_of_seqs 307 out of 1608
Neff 5.4
Searched_HMMs 29240
Date Tue Mar 26 19:01:26 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004530.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1835-1839//hhsearch_pdb/004530hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2heh_A KIF2C protein; kinesin, 1.0 1 1 674.9 26.6 323 203-542 50-386 (387)
2 1v8k_A Kinesin-like protein KI 1.0 1 1 674.8 26.8 325 203-544 70-408 (410)
3 2owm_A Nckin3-434, related to 1.0 1 1 660.6 28.8 339 197-546 31-421 (443)
4 2vvg_A Kinesin-2; motor protei 1.0 1 1 660.6 29.3 334 203-548 3-345 (350)
5 3lre_A Kinesin-like protein KI 1.0 1 1 659.8 27.7 331 197-538 3-355 (355)
6 1ry6_A Internal kinesin; kines 1.0 1 1 658.5 24.9 325 205-545 1-338 (360)
7 3bfn_A Kinesin-like protein KI 1.0 1 1 657.6 24.4 336 199-552 16-361 (388)
8 2zfi_A Kinesin-like protein KI 1.0 1 1 657.0 27.2 329 203-545 3-361 (366)
9 3b6u_A Kinesin-like protein KI 1.0 1 1 656.6 26.4 335 198-548 15-363 (372)
10 1x88_A Kinesin-like protein KI 1.0 1 1 652.9 22.8 331 199-546 3-358 (359)
No 1
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=1.00 E-value=1 Score=674.92 Aligned_cols=323 Identities=57% Similarity=0.887 Sum_probs=300.6
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9980999981999921101599747998099-089937874345454320048993004089998588887532324888
Q 004530 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPT 281 (746)
Q Consensus 203 ~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~-~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~pLV~~ 281 (746)
.++|+|+|||||+++.|...++.+++.+.+. .+.+++|+...+.+.+.+.+.|.||+||+++++|++||+.+++|+|++
T Consensus 50 ~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv~~ 129 (387)
T 2heh_A 50 EHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT 129 (387)
T ss_dssp CCSEEEEEEECCCCHHHHHTTCCBCEECCBSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHH
T ss_conf 99859999889989478325995089988998799958875545444556607861289832787333016667999999
Q ss_pred HHCCCCCCEEECCCCCCCCCCCCCC------------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCC
Q ss_conf 6407885222013689998632588------------8055899999996154333542014322478667765204566
Q 004530 282 IFQRTKATCFAYGQTGSGKTFTMQP------------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGE 349 (746)
Q Consensus 282 vl~G~N~tIfAYGqTGSGKTyTM~G------------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DLLs~ 349 (746)
+|+|||+||||||||||||||||+| ++||++++||..+.....+...|.|++||+|||||+|+|||++
T Consensus 130 ~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~ 209 (387)
T 2heh_A 130 IFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNK 209 (387)
T ss_dssp HHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTT
T ss_pred HHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCC
T ss_conf 86699648997568999988671367777776667762004688999886113345751899999998519768998889
Q ss_pred CCCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 33322010599947990308999438989999999987227756679988889875899999997410000002479999
Q 004530 350 RKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGN 429 (746)
Q Consensus 350 ~~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~~ 429 (746)
+..+.+++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|.|.+.
T Consensus 210 ~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-------------- 275 (387)
T 2heh_A 210 KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK-------------- 275 (387)
T ss_dssp TEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESS--------------
T ss_pred CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEC--------------
T ss_conf 866148996999889469789981899999999999985378144757577565529999999977--------------
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC-CCCCCC
Q ss_conf 9887488799999778987877788764020498888569799999999998089997558999540445410-489860
Q 004530 430 ESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDS-FVGNSK 508 (746)
Q Consensus 430 ~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkds-LgGnsk 508 (746)
....|+|+|||||||||..+++..++.+++|+..||+||++|++||.+|..++.|||||+||||+||||+ ||||++
T Consensus 276 ---~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnsk 352 (387)
T 2heh_A 276 ---GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSR 352 (387)
T ss_dssp ---SSEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEE
T ss_pred ---CEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCE
T ss_conf ---72565799997877765323456554203668887488999999999985589978742667788776630389871
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2899974799989688999999899842432366
Q 004530 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSG 542 (746)
Q Consensus 509 T~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~ 542 (746)
|+||+||||...+++||++||+||+|+|+|+...
T Consensus 353 T~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~ 386 (387)
T 2heh_A 353 TCMIATISPGISSCEYTLNTLRYADRVKELSPHS 386 (387)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHCC-----
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999994886000899999999999962471789
No 2
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=1.00 E-value=1 Score=674.79 Aligned_cols=325 Identities=57% Similarity=0.878 Sum_probs=301.5
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 9980999981999921101599747998099-089937874345454320048993004089998588887532324888
Q 004530 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPT 281 (746)
Q Consensus 203 ~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~-~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~pLV~~ 281 (746)
.++|+|+|||||++..|...++.+++.+.+. .+.+++|+...+.+.+.+.+.|.||+||+++++|++||+.+++|+|++
T Consensus 70 ~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV~~ 149 (410)
T 1v8k_A 70 EHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT 149 (410)
T ss_dssp CCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99849999949889467405996279978998799926865545344556507860189802787310648888889999
Q ss_pred HHCCCCCCEEECCCCCCCCCCCCCC------------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCC
Q ss_conf 6407885222013689998632588------------8055899999996154333542014322478667765204566
Q 004530 282 IFQRTKATCFAYGQTGSGKTFTMQP------------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGE 349 (746)
Q Consensus 282 vl~G~N~tIfAYGqTGSGKTyTM~G------------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DLLs~ 349 (746)
+|+|||+||||||||||||||||+| |+||++.+||..+......+..|.|++||+|||||+|+|||++
T Consensus 150 ~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~ 229 (410)
T 1v8k_A 150 IFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNK 229 (410)
T ss_dssp HHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTT
T ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEECCCC
T ss_conf 74698435896468999998685047787775556750335689999998511035863899999998408889997789
Q ss_pred CCCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 33322010599947990308999438989999999987227756679988889875899999997410000002479999
Q 004530 350 RKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGN 429 (746)
Q Consensus 350 ~~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~~ 429 (746)
...+.+++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|.|.+.
T Consensus 230 ~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-------------- 295 (410)
T 1v8k_A 230 KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTK-------------- 295 (410)
T ss_dssp TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESS--------------
T ss_pred CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEC--------------
T ss_conf 877438987999858559889980899999999999975377333657787777429999999967--------------
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC-CCCCCC
Q ss_conf 9887488799999778987877788764020498888569799999999998089997558999540445410-489860
Q 004530 430 ESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDS-FVGNSK 508 (746)
Q Consensus 430 ~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkds-LgGnsk 508 (746)
....|+|+|||||||||..+++..++.+++|+.+||+||++|++||.+|..++.|||||+||||+||||+ ||||++
T Consensus 296 ---~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnsk 372 (410)
T 1v8k_A 296 ---GRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSR 372 (410)
T ss_dssp ---SSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEE
T ss_pred ---CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCE
T ss_conf ---85056899997887664322455554056889888688999999999985589978743555678876502589965
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 289997479998968899999989984243236676
Q 004530 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNT 544 (746)
Q Consensus 509 T~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~ 544 (746)
|+||+||||...+++|||+||+||+|+|+|.-.|+.
T Consensus 373 T~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~~ 408 (410)
T 1v8k_A 373 TCMIAMISPGISSCEYTLNTLRYADRVKELSHHHHH 408 (410)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHHTTC-----
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999999698612189999999999996448998778
No 3
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=660.63 Aligned_cols=339 Identities=35% Similarity=0.493 Sum_probs=292.5
Q ss_pred CCCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECC--EEEEECCCCCCC-------CCCCCCCEEEEEEEEECCC---
Q ss_conf 1112899980999981999921101599747998099--089937874345-------4543200489930040899---
Q 004530 197 NARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDN--ALTVHEPKLKVD-------LTAYVEKHEFCFDAVLDER--- 264 (746)
Q Consensus 197 ~~~~~~~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~--~v~i~~p~~~~~-------~~~~~~~~~F~FD~VFd~~--- 264 (746)
....+..++|||+|||||+++.|...+..+++.++.. .+++..|..... .....+.+.|+||+||+++
T Consensus 31 ~~~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~ 110 (443)
T 2owm_A 31 FVSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTE 110 (443)
T ss_dssp ---CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTT
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCC
T ss_conf 76678998949999939999688626994599975898627995588765433333212336677268527382787767
Q ss_pred ----CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHCCCC--CCCCCEEEE
Q ss_conf ----98588887532324888640788522201368999863258------880558999999961543--335420143
Q 004530 265 ----VTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQ------PLPLRAAEDLVRLLHQPV--YRNQRFKLW 332 (746)
Q Consensus 265 ----asQ~eVY~~~v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~------Gl~~ra~~dLF~~i~~~~--~~~~~f~V~ 332 (746)
++|++||+.+++|+|+++|+|||+||||||||||||||||+ ||+||++++||..+.... ..+..|.|+
T Consensus 111 ~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~ 190 (443)
T 2owm_A 111 DEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVK 190 (443)
T ss_dssp STTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 76578799998763246888863687427998678899998886468777753799999999988765213677349999
Q ss_pred EEEEEEECCEEECCCCCC------CCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
Q ss_conf 224786677652045663------33220105999479903089994389899999999872277566799888898758
Q 004530 333 LSYFEIYGGKLFDLLGER------KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHA 406 (746)
Q Consensus 333 vSflEIYnE~I~DLLs~~------~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHa 406 (746)
+||+|||||+|+|||++. ..+.|++++.++++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+
T Consensus 191 vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~ 270 (443)
T 2owm_A 191 VSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHA 270 (443)
T ss_dssp EEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEE
T ss_pred EEEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf 99999988975685676345786534430377999995268779982899999999999973378633758776677719
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 9999999741000000247999998874887999997789878777887640204988885697999999999980899-
Q 004530 407 ILQLAIKKHIEVKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQ- 485 (746)
Q Consensus 407 IftI~V~q~~~~~~~~~~~~~~~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~- 485 (746)
||+|+|.+...... ........|+|+|||||||||..+++..+ .+++|+.+||+||++|++||.+|.+++
T Consensus 271 Ifti~v~~~~~~~~--------~~~~~~~~skL~lVDLAGSER~~~t~~~g-~rlkE~~~INkSL~aLg~vI~aL~~~~~ 341 (443)
T 2owm_A 271 VFTIMLKQIHHDLE--------TDDTTERSSRIRLVDLAGSERAKSTEATG-QRLREGSNINKSLTTLGRVIAALADPKS 341 (443)
T ss_dssp EEEEEEEEEC---------------CCEEEEEEEEEECCCCCC---------------CCSSHHHHHHHHHHHHHCC---
T ss_pred EEEEEEEEEECCCC--------CCCCCEEEEEEEEEECCCCCCCCCCCCCC-CCCCCHHHHCHHHHHHHHHHHHHHCCCC
T ss_conf 99999998603567--------88740688779999798875356567766-4121100105789999999999860455
Q ss_pred ---------------------CCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---------------------97558999540445410489860289997479998968899999989984243236676
Q 004530 486 ---------------------IHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNT 544 (746)
Q Consensus 486 ---------------------~hIPyRdSKLTrLLkdsLgGnskT~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~ 544 (746)
.||||||||||+||||+||||++|+||+||||. +++||++||+||+|+|+|++.+..
T Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~v 419 (443)
T 2owm_A 342 SASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVV 419 (443)
T ss_dssp ----------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 555444322234333445677745574547688888862799708999981643--078999999999998544563335
Q ss_pred CC
Q ss_conf 76
Q 004530 545 KK 546 (746)
Q Consensus 545 ~~ 546 (746)
+.
T Consensus 420 N~ 421 (443)
T 2owm_A 420 NQ 421 (443)
T ss_dssp CC
T ss_pred CC
T ss_conf 13
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=660.56 Aligned_cols=334 Identities=35% Similarity=0.532 Sum_probs=299.2
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEEC--CEEEEECCCCCCCC-CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 998099998199992110159974799809--90899378743454-543200489930040899985888875323248
Q 004530 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSD--NALTVHEPKLKVDL-TAYVEKHEFCFDAVLDERVTNDEVYRVTVEPII 279 (746)
Q Consensus 203 ~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~--~~v~i~~p~~~~~~-~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~pLV 279 (746)
.++|||+|||||+++.|...+..+++.+.+ ..+++..|...... ......+.|.||+||+++++|++||+.+++|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334457785276678897997610689987899999
Q ss_pred HHHHCCCCCCEEECCCCCCCCCCCCCC------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCCCCCC
Q ss_conf 886407885222013689998632588------80558999999961543335420143224786677652045663332
Q 004530 280 PTIFQRTKATCFAYGQTGSGKTFTMQP------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKL 353 (746)
Q Consensus 280 ~~vl~G~N~tIfAYGqTGSGKTyTM~G------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DLLs~~~~L 353 (746)
+++++|||+||||||||||||||||+| ++||++++||..+.. ...+..|.|++||+|||||+|+|||++...+
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~-~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~l 161 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINS-SSSNQNFLVIGSYLELYNEEIRDLIKNNTKL 161 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHT-CCTTEEEEEEEEEEEEETTEEEETTTTEEEE
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH-HCCCCCEEEEEEEEEEECCEEEECCCCCCCC
T ss_conf 998578852688646899999878535876675588999999999986-5368757999999999287888855677684
Q ss_pred CCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 20105999479903089994389899999999872277566799888898758999999974100000024799999887
Q 004530 354 CMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNESRG 433 (746)
Q Consensus 354 ~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~~~~~~ 433 (746)
.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+...... ...
T Consensus 162 ~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------~~~ 231 (350)
T 2vvg_A 162 PLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIEN----------KEV 231 (350)
T ss_dssp CEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC--------------CE
T ss_pred EEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC----------CCC
T ss_conf 2567489988815877997499999999999998414600145788887652999999999504678----------761
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEE
Q ss_conf 48879999977898787778876402049888856979999999999808999755899954044541048986028999
Q 004530 434 KVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMIS 513 (746)
Q Consensus 434 ~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkdsLgGnskT~lIa 513 (746)
...|+|+|||||||||..+++..+ .+++|+.+||+||++|++||.+|.+++.|||||+||||+||||+||||++|+||+
T Consensus 232 ~~~skl~lVDLAGSEr~~~t~~~g-~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~ 310 (350)
T 2vvg_A 232 IRVGKLNLVDLAGSERQSKTGATG-ETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCA 310 (350)
T ss_dssp EEEEEEEEEECCCCCC----------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf 788999999689887554456507-7889998875899999999999973899887645588899898608996289999
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 74799989688999999899842432366767667
Q 004530 514 CISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQ 548 (746)
Q Consensus 514 cVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~~~~ 548 (746)
||||...+++||++||+||+|+|+|++.|..+.+.
T Consensus 311 ~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~ 345 (350)
T 2vvg_A 311 NISPASTNYDETMSTLRYADRAKQIKNKPRINEDP 345 (350)
T ss_dssp EECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 96884001899999999999985445666125782
No 5
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=1.00 E-value=1 Score=659.84 Aligned_cols=331 Identities=35% Similarity=0.530 Sum_probs=294.9
Q ss_pred CCCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECCEEEEECCCCCCC-------------CCCCCCCEEEEEEEEECC
Q ss_conf 1112899980999981999921101599747998099089937874345-------------454320048993004089
Q 004530 197 NARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTVHEPKLKVD-------------LTAYVEKHEFCFDAVLDE 263 (746)
Q Consensus 197 ~~~~~~~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~~v~i~~p~~~~~-------------~~~~~~~~~F~FD~VFd~ 263 (746)
+..++..++|||+|||||++..|...+..+++.+.++.+.+.+|..... .....+++.|.||+||++
T Consensus 3 ~~~~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~ 82 (355)
T 3lre_A 3 VTEEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDE 82 (355)
T ss_dssp ---------CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECT
T ss_pred CCHHHCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCHHCCCCCCEEEECEEECC
T ss_conf 67022367878999939699578755995499965996698568877411203555444430002678716870568799
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCC------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
Q ss_conf 9985888875323248886407885222013689998632588------8055899999996154333542014322478
Q 004530 264 RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQP------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFE 337 (746)
Q Consensus 264 ~asQ~eVY~~~v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~G------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflE 337 (746)
+++|++||+.+++|+|+++|+|||+||||||||||||||||+| ++||++.+||..+.... ....|.|++||+|
T Consensus 83 ~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~-~~~~~~v~vS~~E 161 (355)
T 3lre_A 83 TSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIK-EEKICSTAVSYLE 161 (355)
T ss_dssp TCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTT-TTEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHC-CCCEEEEEEEEEE
T ss_conf 887689999999999998737994699971889997242231689888701024467777665204-5735999999999
Q ss_pred EECCEEECCCCCCCCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 66776520456633322010599947990308999438989999999987227756679988889875899999997410
Q 004530 338 IYGGKLFDLLGERKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIE 417 (746)
Q Consensus 338 IYnE~I~DLLs~~~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~ 417 (746)
||||+|+|||++..++.+++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+...
T Consensus 162 IYnE~i~DLL~~~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 241 (355)
T 3lre_A 162 VYNEQIRDLLVNSGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDK 241 (355)
T ss_dssp EETTEEEESSSCCCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEET
T ss_pred EECCEEEECCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 98787799767877723688489998853336995399999999999987327743265768778782999999999657
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCC
Q ss_conf 0000024799999887488799999778987877788764020498888569799999999998089---9975589995
Q 004530 418 VKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDND---QIHIPFRGSK 494 (746)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~---~~hIPyRdSK 494 (746)
... .......|+|+|||||||||..+++..+ .+++|+.+||+||++|++||.||.++ ..|||||+||
T Consensus 242 ~~~---------~~~~~~~skl~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSk 311 (355)
T 3lre_A 242 TAS---------INQNVRIAKMSLIDLAGSERASTSGAKG-TRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSK 311 (355)
T ss_dssp TSC---------TTCCCCCEEEEEEECCCCCC------------------CHHHHHHHHHHHHHC--------CCGGGSH
T ss_pred CCC---------CCCCEEEEEEEEEECCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 788---------8877779999999798877576778733-789999999899999987999987145889868763378
Q ss_pred CHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 40445410489860289997479998968899999989984243
Q 004530 495 LTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSL 538 (746)
Q Consensus 495 LTrLLkdsLgGnskT~lIacVSP~~~~~~ETLsTLrfA~Rvk~I 538 (746)
||+||||+|||||+|+||+||||...+++||++||+||+|+|+|
T Consensus 312 LT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 312 LTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp HHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 88988986489965999999488622389999999999985659
No 6
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=658.52 Aligned_cols=325 Identities=48% Similarity=0.777 Sum_probs=298.0
Q ss_pred CEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 80999981999921101599747998099-08993787434545432004899300408999858888753232488864
Q 004530 205 KIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIF 283 (746)
Q Consensus 205 ~IrV~vRVRPl~~~E~~~~~~~iv~v~~~-~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~pLV~~vl 283 (746)
+|||+|||||+++.|...+..+++.+.++ .+.+.+|....+.+.+.+.+.|.||+||+++++|++||+.+++|+|++++
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~ 80 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY 80 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 91999989999957851599519998899789992886543555454550688316956788778889877633345530
Q ss_pred C-CCCCCEEECCCCCCCCCCCCCC-----------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCCCC
Q ss_conf 0-7885222013689998632588-----------805589999999615433354201432247866776520456633
Q 004530 284 Q-RTKATCFAYGQTGSGKTFTMQP-----------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERK 351 (746)
Q Consensus 284 ~-G~N~tIfAYGqTGSGKTyTM~G-----------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DLLs~~~ 351 (746)
+ |+|+||||||||||||||||+| |+||++.+||..+... .....|.|++||+|||||+|+|||++++
T Consensus 81 ~~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~v~DLL~~~~ 159 (360)
T 1ry6_A 81 ENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIY-DKDNTKGIFISFYEIYCGKLYDLLQKRK 159 (360)
T ss_dssp HHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHH-CSSSCEEEEEEEEEEETTEEEESCCC--
T ss_pred CCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCC
T ss_conf 488015999607899999878766777787667981789999999998752-4577369999999711885677656776
Q ss_pred CCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 32201059994799030899943898999999998722775667998888987589999999741000000247999998
Q 004530 352 KLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNES 431 (746)
Q Consensus 352 ~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~~~~ 431 (746)
.+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|.+...
T Consensus 160 ~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-------------- 225 (360)
T 1ry6_A 160 MVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINK-------------- 225 (360)
T ss_dssp ---------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTT--------------
T ss_pred CCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCC--------------
T ss_conf 640467389978986728999589999999999986551021220468876634999999996358--------------
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEE
Q ss_conf 87488799999778987877788764020498888569799999999998089997558999540445410489860289
Q 004530 432 RGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVM 511 (746)
Q Consensus 432 ~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkdsLgGnskT~l 511 (746)
....|+|+|||||||||..+++..++++++|+..||+||++|++||.+|..++.||||||||||+||||+||||++|+|
T Consensus 226 -~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m 304 (360)
T 1ry6_A 226 -NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIM 304 (360)
T ss_dssp -TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEE
T ss_pred -CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf -7406679999788776545455556640678988778899999999998568997765267889999997489971999
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9974799989688999999899842432366767
Q 004530 512 ISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTK 545 (746)
Q Consensus 512 IacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~ 545 (746)
|+||||...+++||++||+||+|+|+|++.+..+
T Consensus 305 Ia~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~ 338 (360)
T 1ry6_A 305 IANISPTISCCEQTLNTLRYSSRVKNKGNSKLEG 338 (360)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHCC--------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9996887323899999999999986355676668
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=657.65 Aligned_cols=336 Identities=31% Similarity=0.447 Sum_probs=293.9
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCCEEE-EECCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 1289998099998199992110159974799-809908993787434545432004899300408999858888753232
Q 004530 199 RENNVAKIRVVVRKRPLNKKELSRKEEDIVT-VSDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEP 277 (746)
Q Consensus 199 ~~~~~~~IrV~vRVRPl~~~E~~~~~~~iv~-v~~~~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~p 277 (746)
.....++|+|+|||||+++.|...+...|+. .++..+.+..+.. ..+.+.|.||+||+++++|++||+.+++|
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~------~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~p 89 (388)
T 3bfn_A 16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRN------HQETLKYQFDAFYGERSTQQDIYAGSVQP 89 (388)
T ss_dssp SSSCCCCCEEEEEECCCC-----------------------------------CEEEEECSEEECTTCCHHHHHHHHTGG
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCC------CCCEEEEECCEEECCCCCHHHHHHHHHHH
T ss_conf 568999979999779899145346998639955998599956888------87705987236956789775778998888
Q ss_pred HHHHHHCCCCCCEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHCCCC--CCCCCEEEEEEEEEEECCEEECCCCC
Q ss_conf 4888640788522201368999863258------880558999999961543--33542014322478667765204566
Q 004530 278 IIPTIFQRTKATCFAYGQTGSGKTFTMQ------PLPLRAAEDLVRLLHQPV--YRNQRFKLWLSYFEIYGGKLFDLLGE 349 (746)
Q Consensus 278 LV~~vl~G~N~tIfAYGqTGSGKTyTM~------Gl~~ra~~dLF~~i~~~~--~~~~~f~V~vSflEIYnE~I~DLLs~ 349 (746)
+|+++|+|||+||||||||||||||||+ ||+||++.+||..+.... .....|.|++||+|||||+|+|||++
T Consensus 90 lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~ 169 (388)
T 3bfn_A 90 ILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDP 169 (388)
T ss_dssp GHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSC
T ss_pred HHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCC
T ss_conf 88876169656676116888999768656755664168999999999987423377714899999999988864560016
Q ss_pred C-CCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 3-332201059994799030899943898999999998722775667998888987589999999741000000247999
Q 004530 350 R-KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDG 428 (746)
Q Consensus 350 ~-~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~ 428 (746)
. ..+.|++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+......
T Consensus 170 ~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~-------- 241 (388)
T 3bfn_A 170 ASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAP-------- 241 (388)
T ss_dssp SSCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTT--------
T ss_pred CCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC--------
T ss_conf 788845998699998853605999589999999999975026522364778777773999999998226888--------
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 99887488799999778987877788764020498888569799999999998089997558999540445410489860
Q 004530 429 NESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSK 508 (746)
Q Consensus 429 ~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkdsLgGnsk 508 (746)
.....|+|+|||||||||..+++..+ .+++|+..||+||++|++||.+|.++..|||||+||||+||||+||||++
T Consensus 242 ---~~~~~skL~lVDLAGSEr~~~t~~~g-~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnsk 317 (388)
T 3bfn_A 242 ---FRQREGKLYLIDLAGSEDNRRTGNKG-LRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAH 317 (388)
T ss_dssp ---CCEEEEEEEEEECCCTTC---------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCE
T ss_pred ---CCEEEEEEEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf ---73368899999898776655456755-11477767506399999999999669998867565889999986089962
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 28999747999896889999998998424323667676678786
Q 004530 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQGQNS 552 (746)
Q Consensus 509 T~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~~~~~~~~ 552 (746)
|+||+||||...+++||++||+||+|+|+|++.|..+.+.....
T Consensus 318 T~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~ 361 (388)
T 3bfn_A 318 SILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHA 361 (388)
T ss_dssp EEEEEEECCSGGGHHHHHHHHHHHCSEEEEC-------------
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 89999979850008999999999999851757673567899899
No 8
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=657.02 Aligned_cols=329 Identities=34% Similarity=0.514 Sum_probs=294.5
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC--------CCHHHHHHHH
Q ss_conf 99809999819999211015997479980990899378743454543200489930040899--------9858888753
Q 004530 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDER--------VTNDEVYRVT 274 (746)
Q Consensus 203 ~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~--------asQ~eVY~~~ 274 (746)
..+|||+|||||++..|...+..+++.++++.+.+..|.... ...+.|.||+||+++ ++|++||+.+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~-----~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~ 77 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPK-----ETPKSFSFDYSYWSHTSPEDINYASQKQVYRDI 77 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTT-----SCCEEEECSEEEECSSCTTSSSCCCHHHHHHHT
T ss_pred CCCCEEEEECCCCCHHHCCCCCCEEEEECCCCEEEECCCCCC-----CCCEEEECCEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 998089998899983551579976999779967995367777-----776278624696057666544567699999999
Q ss_pred HHHHHHHHHCCCCCCEEECCCCCCCCCCCCC--------CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECC
Q ss_conf 2324888640788522201368999863258--------88055899999996154333542014322478667765204
Q 004530 275 VEPIIPTIFQRTKATCFAYGQTGSGKTFTMQ--------PLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDL 346 (746)
Q Consensus 275 v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~--------Gl~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DL 346 (746)
++|+|+++|+|||+||||||||||||||||+ ||+||++++||..+......+..|.|++||+|||||+|+||
T Consensus 78 ~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DL 157 (366)
T 2zfi_A 78 GEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDL 157 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEC
T ss_conf 99999997469714899858999988458647876577866999999999987640267706999999999608847891
Q ss_pred CCCC--CCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
Q ss_conf 5663--33220105999479903089994389899999999872277566799888898758999999974100000024
Q 004530 347 LGER--KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRR 424 (746)
Q Consensus 347 Ls~~--~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~ 424 (746)
|++. ..+.+++++.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.......
T Consensus 158 L~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~--- 234 (366)
T 2zfi_A 158 LNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAET--- 234 (366)
T ss_dssp TCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTT---
T ss_pred CCCCCCCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC---
T ss_conf 23556788568886999879769899997799999999999762246112657777776459999999996046778---
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHC------------CCCCCCCCC
Q ss_conf 79999988748879999977898787778876402049888856979999999999808------------999755899
Q 004530 425 NNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDN------------DQIHIPFRG 492 (746)
Q Consensus 425 ~~~~~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~------------~~~hIPyRd 492 (746)
.......|+|+|||||||||..+++..+ .+++|+.+||+||++|++||.+|.+ +..|||||+
T Consensus 235 -----~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRd 308 (366)
T 2zfi_A 235 -----NITTEKVSKISLVDLAGSERADSTGAKG-TRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRD 308 (366)
T ss_dssp -----TCEEEEEEEEEEEECCCGGGC------C-CCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGG
T ss_pred -----CCCCEEEEEEEEEECCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf -----7541367689999689886455467876-3004465676789999999999871234543333456677464333
Q ss_pred CCCHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 95404454104898602899974799989688999999899842432366767
Q 004530 493 SKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTK 545 (746)
Q Consensus 493 SKLTrLLkdsLgGnskT~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~ 545 (746)
||||+||||+||||++|+||+||||...+++||++||+||+|+|+|++.|...
T Consensus 309 SkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~ 361 (366)
T 2zfi_A 309 SVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVN 361 (366)
T ss_dssp SHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC---------
T ss_pred CHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 28899999872899609999996887334999999999999984055888899
No 9
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=656.57 Aligned_cols=335 Identities=36% Similarity=0.535 Sum_probs=297.5
Q ss_pred CCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEEC--CEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 11289998099998199992110159974799809--9089937874345454320048993004089998588887532
Q 004530 198 ARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSD--NALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTV 275 (746)
Q Consensus 198 ~~~~~~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~--~~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v 275 (746)
......++|||+|||||++..|...+...++.++. ..+.+..|.... ....+.|.||+||+++++|++||+.++
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~----~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~ 90 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTA----HEMPKTFTFDAVYDWNAKQFELYDETF 90 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTT----TCCCEEEECSEEECTTCCHHHHHHHTH
T ss_pred CCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCC----CCCCEEEECCEEECCCCCHHHHHHHHH
T ss_conf 6678999839999869899355304996389995899879997788777----778438876869688674178988787
Q ss_pred HHHHHHHHCCCCCCEEECCCCCCCCCCCCCC---------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECC
Q ss_conf 3248886407885222013689998632588---------8055899999996154333542014322478667765204
Q 004530 276 EPIIPTIFQRTKATCFAYGQTGSGKTFTMQP---------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDL 346 (746)
Q Consensus 276 ~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~G---------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DL 346 (746)
+|+|+++|+|||+||||||||||||||||+| |+||++.+||..+.. ..+..|.|++||+|||||+|+||
T Consensus 91 ~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DL 168 (372)
T 3b6u_A 91 RPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR--SQNQQYLVRASYLEIYQEEIRDL 168 (372)
T ss_dssp HHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT--CSSCEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCEEEEEEEEEEECCEEEEC
T ss_conf 7778998679813588656899999875755899834488188999999998651--45773699998999967888997
Q ss_pred CCCC--CCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
Q ss_conf 5663--33220105999479903089994389899999999872277566799888898758999999974100000024
Q 004530 347 LGER--KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRR 424 (746)
Q Consensus 347 Ls~~--~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~ 424 (746)
|++. ..+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+......
T Consensus 169 L~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~---- 244 (372)
T 3b6u_A 169 LSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLD---- 244 (372)
T ss_dssp TSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC--------
T ss_pred CCCCCCCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC----
T ss_conf 7897777736898799967528988999267999999999999766725455778777642999999999604778----
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHCC
Q ss_conf 7999998874887999997789878777887640204988885697999999999980899-975589995404454104
Q 004530 425 NNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQ-IHIPFRGSKLTEVLRDSF 503 (746)
Q Consensus 425 ~~~~~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~-~hIPyRdSKLTrLLkdsL 503 (746)
.......|+|+|||||||||..+++..+ .+++|+..||+||++|++||.+|.+++ .|||||+||||+||||+|
T Consensus 245 -----~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsL 318 (372)
T 3b6u_A 245 -----GENHIRVGKLNLVDLAGSERQAKTGAQG-ERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSL 318 (372)
T ss_dssp ------CCCEEEEEEEEEECCCCCE-----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTT
T ss_pred -----CCCCEEEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
T ss_conf -----8762678899999798876554457515-4314675650649999999999863898878662208899999862
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 898602899974799989688999999899842432366767667
Q 004530 504 VGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQ 548 (746)
Q Consensus 504 gGnskT~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~~~~ 548 (746)
|||++|+||+||||...+++||++||+||+|+|+|++.|..+.+.
T Consensus 319 gGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~ 363 (372)
T 3b6u_A 319 GGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDP 363 (372)
T ss_dssp TSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC--
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCH
T ss_conf 999548999996885247999999999999986455666255775
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=652.87 Aligned_cols=331 Identities=36% Similarity=0.521 Sum_probs=291.4
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECC--EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 12899980999981999921101599747998099--0899378743454543200489930040899985888875323
Q 004530 199 RENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDN--ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVE 276 (746)
Q Consensus 199 ~~~~~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~--~v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~ 276 (746)
++...++|+|+|||||++..|...+..+++.+++. .+.+..+. .......+.|.||+||+++++|++||+.+++
T Consensus 3 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~----~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~ 78 (359)
T 1x88_A 3 KEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGG----LADKSSRKTYTFDMVFGASTKQIDVYRSVVC 78 (359)
T ss_dssp ------CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEE----ETTEEEEEEEECSEEECTTCCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCC----CCCCCCCEEEECEEEEECCCCHHHHHHHHHH
T ss_conf 778999859999908999256304996499975998579983787----6677674487540798526745378999988
Q ss_pred HHHHHHHCCCCCCEEECCCCCCCCCCCCC-----------------CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
Q ss_conf 24888640788522201368999863258-----------------8805589999999615433354201432247866
Q 004530 277 PIIPTIFQRTKATCFAYGQTGSGKTFTMQ-----------------PLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIY 339 (746)
Q Consensus 277 pLV~~vl~G~N~tIfAYGqTGSGKTyTM~-----------------Gl~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIY 339 (746)
|+|+++|+|||+||||||||||||||||+ ||+||++.+||..+.. .+..|.|++||+|||
T Consensus 79 plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~---~~~~~~v~vS~~EIY 155 (359)
T 1x88_A 79 PILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD---NGTEFSVKVSLLEIY 155 (359)
T ss_dssp HHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS---SSEEEEEEEEEEEEE
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEEEEEEEE
T ss_conf 86898737982489984789998756885667766544444566687038999999987741---582599999999995
Q ss_pred CCEEECCCCCC----CCCCCEECC--CCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 77652045663----332201059--994799030899943898999999998722775667998888987589999999
Q 004530 340 GGKLFDLLGER----KKLCMREDG--RQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIK 413 (746)
Q Consensus 340 nE~I~DLLs~~----~~L~Ired~--~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~ 413 (746)
||+|+|||++. ..+.+++++ .++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|.
T Consensus 156 nE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~ 235 (359)
T 1x88_A 156 NEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH 235 (359)
T ss_dssp TTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEE
T ss_pred CCEEEEHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 76100121156555666058865577898898287899849999999999987751461225477877776289999998
Q ss_pred EEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 74100000024799999887488799999778987877788764020498888569799999999998089997558999
Q 004530 414 KHIEVKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGS 493 (746)
Q Consensus 414 q~~~~~~~~~~~~~~~~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdS 493 (746)
+...... .......|+|+|||||||||..+++..+ .+.+|+.+||+||++|++||.+|.++..|||||+|
T Consensus 236 ~~~~~~~---------~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdS 305 (359)
T 1x88_A 236 MKETTID---------GEELVKIGKLNLVDLAGSENIGRSGAVD-KRAREAGNINQSLLTLGRVITALVERTPHVPYRES 305 (359)
T ss_dssp EEEECTT---------SCEEEEEEEEEEEECCCCCC----------------CCCHHHHHHHHHHHHHHTTCSCCCGGGS
T ss_pred EECCCCC---------CCCEEEEEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 7435578---------8713778899998189987354358863-20177765307899999999998647997762256
Q ss_pred CCHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 54044541048986028999747999896889999998998424323667676
Q 004530 494 KLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKK 546 (746)
Q Consensus 494 KLTrLLkdsLgGnskT~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik~~~~~~~ 546 (746)
|||+||||+||||++|+||+||||...+++||++||+||+|+|+|++.|..+.
T Consensus 306 kLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 306 KLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp HHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 68899999758997299999978974568999999999999865667661477
Done!