Query 004533
Match_columns 746
No_of_seqs 301 out of 1703
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 18:00:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/004533.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1840-1843//hhsearch_pdb/004533hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1014.2 41.4 491 1-626 33-584 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 988.8 39.6 507 1-626 41-618 (654)
3 3d3a_A Beta-galactosidase; pro 1.0 1 1 944.0 38.4 496 1-627 38-587 (612)
4 1tg7_A Beta-galactosidase; TIM 1.0 1 1 875.1 36.5 593 1-626 37-946 (971)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 807.6 40.5 592 1-625 57-977 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 194.7 5.1 108 2-121 75-226 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 178.9 3.7 198 1-216 30-295 (516)
8 2jx9_A Latrophilin 1; lectin, 1.0 1 1 169.9 5.6 85 660-746 12-101 (106)
9 2zx2_A CSL3; lectin, rhamnose, 1.0 1 1 167.3 7.1 84 660-746 105-195 (195)
10 2zx2_A CSL3; lectin, rhamnose, 1.0 1 1 164.4 7.2 84 660-746 5-95 (195)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1014.18 Aligned_cols=491 Identities=24% Similarity=0.433 Sum_probs=402.0
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 91889999998599999872226445886884355781269999999998793799702752232247799782353038
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVA 80 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG~P~WL~~~p 80 (746)
+|+|+|+||||+|+|+|++|||||+|||+||+|||+|++||++||++|+++||+|||||||||||||++||+|+||+++|
T Consensus 33 ~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p 112 (595)
T 4e8d_A 33 DWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN 112 (595)
T ss_dssp GHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS
T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCHHHCCCC
T ss_conf 99999999997399779985367870898875413463669999999998699899704774301217782775550687
Q ss_pred CEEEECCCCCCE-----------------------------EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 804313899912-----------------------------203677877656899905799999989862997423980
Q 004533 81 GIVFRSDNKPYK-----------------------------IENEYQTIEPAFHEKGPPYVLWAAKMAVDFHTGVPWVMC 131 (746)
Q Consensus 81 ~~~~Rt~~~~y~-----------------------------iENEYg~~~~~~g~~d~~Ym~~L~~~~~~~gi~vp~~~~ 131 (746)
+++|++++.|+ ||||||+ |+ +|++||+||+++++++|++|||+||
T Consensus 113 -~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~----~~-~~~~Y~~~l~~~~~~~Gi~vpl~t~ 186 (595)
T 4e8d_A 113 -MRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGS----YG-EDKAYLRAIRQLMEECGVTCPLFTS 186 (595)
T ss_dssp -SCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGG----TC-CCHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred -CEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC----CC-CCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf -45315897999999999999999998874106998899975543466----57-7189999999999975996789982
Q ss_pred CCCC-------CC--CCCCCCCC-CCCCCCCCCC-----CCCCCC-CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4789-------99--97312779-8755788879-----999999-9232013653233347988658988899999999
Q 004533 132 KQDD-------AP--GPVINACN-GMRCGETFKG-----PNSPNK-PSIWTEDWTSFYQVWGGKPYIRSAQDIAFHVALF 195 (746)
Q Consensus 132 ~~~~-------~~--~~~i~~~~-g~~~~~~~~~-----~~~p~~-P~~~tE~~~Gwf~~WG~~~~~~~~~~~~~~~~~~ 195 (746)
++.+ .. +++++||| |.+|.+.|.. +.+|++ |+||+|||+|||++||++++++++++++..++++
T Consensus 187 d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~ 266 (595)
T 4e8d_A 187 DGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPIITRDPKELADAVREV 266 (595)
T ss_dssp ECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHH
T ss_pred CCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 59513104588537888377761798566767788876303899998089863165445569987778999999999999
Q ss_pred HHHCCEEEEEEEECCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 98188243443322756878888775--------3224678899776799887127999999999964158877886521
Q 004533 196 IAKNGSYVNYYMYHGGTNFGRTAAAF--------MITGYYDQAPLDEYGLVREPKWGHLKELHAAIKLCSRPLLTGTQNV 267 (746)
Q Consensus 196 l~~g~s~~n~YM~hGGTNfG~~~ga~--------~~TSYDYdAPL~E~G~~~tpKY~~lR~l~~~l~~~~~~l~~~~p~~ 267 (746)
|++| | +||||||||||||+|+|+. ++|||||||||+|+|++ ||||.++|+++..+. .+...+. |..
T Consensus 267 l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E~G~~-t~Ky~~lr~~i~~~~--~~~p~~~-P~~ 340 (595)
T 4e8d_A 267 LEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDEEGNP-TAKYLAVKKMMATHF--SEYPQLE-PLY 340 (595)
T ss_dssp HHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCTTSCB-CHHHHHHHHHHHHHC--TTSCCCC-CCC
T ss_pred HHCC-C-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHC--CCCCCCC-CCC
T ss_conf 9769-9-54985545327242468777777777877766779805867783-478999999999747--7999999-987
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 24788521467521665202432115866406999726254127721221478872000120110001233334575468
Q 004533 268 ISLGQLQEAFVFEETSGVCAAFLVNNDERKAVTVLFRNISYELPRKSISILPDCKTVAFNTERVSTQYNKRSKTSNLKFD 347 (746)
Q Consensus 268 ~~~~~~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~lp~~sv~il~~~~~v~~nt~~v~~~~~~~~~~~~~~~~ 347 (746)
. ++..|. .|.+ .. .
T Consensus 341 ~------~~~~~~-------------------~v~l-------~~-~--------------------------------- 354 (595)
T 4e8d_A 341 K------ESMELD-------------------AIPL-------VE-K--------------------------------- 354 (595)
T ss_dssp C------CBCCEE-------------------EEEE-------EE-E---------------------------------
T ss_pred C------CCCCCC-------------------EEEE-------CC-C---------------------------------
T ss_conf 7------643565-------------------0875-------04-1---------------------------------
Q ss_pred CHHHHHHH---HHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCEEEEEEECCEEEEEE
Q ss_conf 81356574---331103576432456411220467888866999997406999998755736734699999999899876
Q 004533 348 SDEKWEEY---REAILNFDNTLLRAEGLLDQISAAKDASDYFWYTFRFHYNSSNAQAPLDVQSHGHILHAFVNGEYTGSA 424 (746)
Q Consensus 348 ~~~~w~~~---~e~~~~~~~~~~~~p~~~Eql~~t~d~~gy~~Y~t~~~~~~~~~~~~L~i~~~~d~~~vfvNG~~~G~~ 424 (746)
.+.|+.+ .+++ ....|.+||+|+| .+||+||||++.... ....|++.+++|||+|||||+++|++
T Consensus 355 -~~L~~~l~~l~~~~------~s~~P~~mE~lgq---~~GyvlY~t~i~~~~--~~~~L~~~~~~Dra~Vfvdg~~~g~l 422 (595)
T 4e8d_A 355 -VSLFETLDSLSSPV------ESLYPQKMEELGQ---SYGYLLYRTETNWDA--EEERLRIIDGRDRAQLYVDGQWVKTQ 422 (595)
T ss_dssp -EEHHHHHHHHCCCE------EESSCCBTGGGTC---CSSEEEEEEEEECSS--SSEEEEEEEEESEEEEEETTEEEEEE
T ss_pred -CCHHHHHHHCCCCC------CCCCCCCHHHCCC---CCCEEEEEECCCCCC--CCCEEECCCCCEEEEEEECCEEEEEE
T ss_conf -54899665507764------3699889889299---767599982268888--87346327874489999899799999
Q ss_pred ECCCCCEEEEEEEEEECCCCC-CEEEEEEECCCCCCCCCCC--CCCCCCEEE-EEECCEECCCCCCE-EEECCCCCHHHC
Q ss_conf 437776016997334225898-5489997438974541243--540062659-99898205558836-961167301020
Q 004533 425 HGSHDNVSFTLRNTVHLRQGT-NDGALLSVTVGLPDSGAFL--ERKVAGVHR-VRVQDKSFTNCSWG-YQVGLIGEKLQI 499 (746)
Q Consensus 425 ~~~~~~~~~~~~~~~~l~~g~-~~l~iLve~~Gr~n~G~~~--~~~~kGi~g-V~l~~~~l~~~~W~-~~~~l~ge~~~~ 499 (746)
+++....++ +++...+. ++|+||||||||+|||..+ ++++|||+| |+|+++.|+ +|+ |+++|+..
T Consensus 423 ~r~~~~~~i----~~~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~~l~--~W~~~~L~l~~~---- 492 (595)
T 4e8d_A 423 YQTEIGEDI----FYQGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLHFLL--NWKHYPLPLDNP---- 492 (595)
T ss_dssp EGGGTTSCE----EECCCSSSEEEEEEEEECCCCCCSGGGTTCGGGSCEEEEEEEETTEECC--CEEEEEECCCCG----
T ss_pred ECCCCCCEE----EEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCEECC--CCEEEEECCCHH----
T ss_conf 745676147----8535778877899999858975167556868888787887699999857--848976333113----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 13577666655556899976329999997789999728972887329999878210002212347889983699823012
Q 004533 500 YSNLGLNKVLWSSIRSPTRQLTWYKTTFRAPAGNDPIALNLQSMGKGEAWVNGQSIGRYWVSFKTSKGNPSQTQYAVNTV 579 (746)
Q Consensus 500 ~~~~~~~~~~w~~~~~~~~~~~~yk~~F~~~~~~d~~~Ld~~~~gKG~v~VNG~~lGRYW~~~~~~~ggPqqt~~~~~~~ 579 (746)
..+.|.... ...+|+||+++|++++..| |||||+||+||+|||||+||||||+ + ||||||
T Consensus 493 ------~~~~~~~~~-~~~~P~fy~g~f~~~~~~D-TfLd~~gwgKG~v~VNG~nLGRYW~-~-----GPQ~tL------ 552 (595)
T 4e8d_A 493 ------EKIDFSKGW-TQGQPAFYAYDFTVEEPKD-TYLDLSEFGKGVAFVNGQNLGRFWN-V-----GPTLSL------ 552 (595)
T ss_dssp ------GGCCTTSCC-CTTSCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET-T-----CSBCEE------
T ss_pred ------HHCCCCCCC-CCCCCEEEEEEEECCCCCC-EEEECCCCCEEEEEECCEEEECCCC-C-----CCEEEE------
T ss_conf ------222345566-7889758999997599888-7996788864889988721352467-7-----976889------
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 22000001101332234676435666359999831699862299843
Q 004533 580 TSIHFCAIIKATNTYHVPRAFLKPTGNLLVLLEEENGNPLGITVDTI 626 (746)
Q Consensus 580 ~~~~~~~~~~~~~~Y~vP~~~Lk~g~N~lvi~E~~~~~~~~i~~~~~ 626 (746)
| ||++|||+|.|+|||||+++.....|++.+.
T Consensus 553 --------------Y-vP~~~Lk~G~NeIvvfEl~~~~~~~i~~~~~ 584 (595)
T 4e8d_A 553 --------------Y-IPHSYLKEGANRIIIFETEGQYKEEIHLTRK 584 (595)
T ss_dssp --------------E-ECGGGSCSEEEEEEEEESSSCCCSEEEEESS
T ss_pred --------------E-ECHHHHCCCCCEEEEEEECCCCCCEEEEECC
T ss_conf --------------9-6389957687269999952788854786346
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=988.84 Aligned_cols=507 Identities=25% Similarity=0.410 Sum_probs=389.2
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 91889999998599999872226445886884355781269999999998793799702752232247799782353038
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVA 80 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG~P~WL~~~p 80 (746)
+|+|+|+||||+|+|+|++||+||.|||+||+|||+|++||++||++|+++||+|||||||||||||++||+|+||+++|
T Consensus 41 ~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p 120 (654)
T 3thd_A 41 YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKE 120 (654)
T ss_dssp GHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGST
T ss_pred HHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCC
T ss_conf 99999999997199889999633640898984674553779999999998699899556774321038886896785599
Q ss_pred CEEEECCCCCCE-----------------------------EECCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCEEE
Q ss_conf 804313899912-----------------------------203677877656899905799999989862-99742398
Q 004533 81 GIVFRSDNKPYK-----------------------------IENEYQTIEPAFHEKGPPYVLWAAKMAVDF-HTGVPWVM 130 (746)
Q Consensus 81 ~~~~Rt~~~~y~-----------------------------iENEYg~~~~~~g~~d~~Ym~~L~~~~~~~-gi~vp~~~ 130 (746)
++++|++++.|+ ||||||+ |+.||++||+||+++++++ |++||+++
T Consensus 121 ~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~----y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t 196 (654)
T 3thd_A 121 SILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGS----YFACDFDYLRFLQKRFRHHLGDDVVLFT 196 (654)
T ss_dssp TCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGG----SSCCCHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC----CCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 845742998999999999999999852431247997899983144566----5656199999999999874499655696
Q ss_pred ECCCCCCCCCCCCC---CCCCCCCCCCC------------CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 04789999731277---98755788879------------9999999232013653233347988658988899999999
Q 004533 131 CKQDDAPGPVINAC---NGMRCGETFKG------------PNSPNKPSIWTEDWTSFYQVWGGKPYIRSAQDIAFHVALF 195 (746)
Q Consensus 131 ~~~~~~~~~~i~~~---~g~~~~~~~~~------------~~~p~~P~~~tE~~~Gwf~~WG~~~~~~~~~~~~~~~~~~ 195 (746)
||+.. +.+..| +|.+|..+|.. ..+|++|+||+|||+|||++||++++.+++++++..++++
T Consensus 197 ~D~~~---~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~ 273 (654)
T 3thd_A 197 TDGAH---KTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDI 273 (654)
T ss_dssp EEESS---HHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHCSSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHH
T ss_pred ECCCC---CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 06985---344347875771310246879637899999997489989599610153577579987788989999999999
Q ss_pred HHHCCEEEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 98188243443322756878888775-----3224678899776799887127999999999964158877886521247
Q 004533 196 IAKNGSYVNYYMYHGGTNFGRTAAAF-----MITGYYDQAPLDEYGLVREPKWGHLKELHAAIKLCSRPLLTGTQNVISL 270 (746)
Q Consensus 196 l~~g~s~~n~YM~hGGTNfG~~~ga~-----~~TSYDYdAPL~E~G~~~tpKY~~lR~l~~~l~~~~~~l~~~~p~~~~~ 270 (746)
|++|+| +||||||||||||||+|+. ++|||||||||+|+|++ ||||.++|+++. .+.+...+..|.+
T Consensus 274 l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~E~G~~-t~Ky~~lr~li~---~~~~~~~~~~P~~--- 345 (654)
T 3thd_A 274 LARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDL-TEKYFALRNIIQ---KFEKVPEGPIPPS--- 345 (654)
T ss_dssp HHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBCTTCCB-CHHHHHHHHHHT---TTSCCCCSCCCCC---
T ss_pred HHCCCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHH---HHCCCCCCCCCCC---
T ss_conf 965984-58986345336232467887788735667678724635673-378999999999---7147998889998---
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH
Q ss_conf 88521467521665202432115866406999726254127721221478872000120110001233334575468813
Q 004533 271 GQLQEAFVFEETSGVCAAFLVNNDERKAVTVLFRNISYELPRKSISILPDCKTVAFNTERVSTQYNKRSKTSNLKFDSDE 350 (746)
Q Consensus 271 ~~~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~lp~~sv~il~~~~~v~~nt~~v~~~~~~~~~~~~~~~~~~~ 350 (746)
.++..|+. |.+ .. . ..
T Consensus 346 ---~p~~~~~~-------------------v~l-------~~-~----------------------------------~~ 361 (654)
T 3thd_A 346 ---TPKFAYGK-------------------VTL-------EK-L----------------------------------KT 361 (654)
T ss_dssp ---CCBCCCEE-------------------EEC-------EE-E----------------------------------EE
T ss_pred ---CCCCCCCC-------------------EEE-------CC-C----------------------------------CC
T ss_conf ---76456675-------------------752-------22-2----------------------------------34
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEE--ECCCCEEEEEEECCEEEEEEECCC
Q ss_conf 565743311035764324564112204678888669999974069999987557--367346999999998998764377
Q 004533 351 KWEEYREAILNFDNTLLRAEGLLDQISAAKDASDYFWYTFRFHYNSSNAQAPLD--VQSHGHILHAFVNGEYTGSAHGSH 428 (746)
Q Consensus 351 ~w~~~~e~~~~~~~~~~~~p~~~Eql~~t~d~~gy~~Y~t~~~~~~~~~~~~L~--i~~~~d~~~vfvNG~~~G~~~~~~ 428 (746)
.|+.+.. +..........|.+||+|+| .+||+||||++..... ....|. +.+++|||+|||||+++|+++++.
T Consensus 362 L~~~l~~-l~~~~~~~s~~P~tmE~l~Q---~~GyvlY~t~i~~~~~-~~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~ 436 (654)
T 3thd_A 362 VGAALDI-LCPSGPIKSLYPLTFIQVKQ---HYGFVLYRTTLPQDCS-NPAPLSSPLNGVHDRAYVAVDGIPQGVLERNN 436 (654)
T ss_dssp TTTTHHH-HCTTCCEEESSCCBTGGGTC---CSSEEEEEEECSSCEE-EEEEEECTTCCEESEEEEEETTEEEEEEETTT
T ss_pred HHHHHHH-HCCCCCCCCCCCCCHHHHCC---CCCEEEEEEECCCCCC-CCCCEEECCCCCCEEEEEEECCEEEEEEECCC
T ss_conf 8997776-27677753699889899288---7576999832577778-88403430478632799988997999996156
Q ss_pred CCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE-EEECCEECCCCCCE-EEECCCCCHHHCCC-----
Q ss_conf 760169973342258985489997438974541243540062659-99898205558836-96116730102013-----
Q 004533 429 DNVSFTLRNTVHLRQGTNDGALLSVTVGLPDSGAFLERKVAGVHR-VRVQDKSFTNCSWG-YQVGLIGEKLQIYS----- 501 (746)
Q Consensus 429 ~~~~~~~~~~~~l~~g~~~l~iLve~~Gr~n~G~~~~~~~kGi~g-V~l~~~~l~~~~W~-~~~~l~ge~~~~~~----- 501 (746)
. .++ ++..+.+ ++|+||||||||+|||..+. ++|||+| |+|+++.|+ +|+ |+++++........
T Consensus 437 ~---~~l--~~~~~~~-~~L~ILVEN~GRvNyG~~i~-d~KGi~g~V~l~~~~l~--~W~~~~L~~~~~~~~~~~~~~~~ 507 (654)
T 3thd_A 437 V---ITL--NITGKAG-ATLDLLVENMGRVNYGAYIN-DFKGLVSNLTLSSNILT--DWTIFPLDTEDAVRSHLGGWGHR 507 (654)
T ss_dssp B---CEE--EEEECTT-CEEEEEEECCCCBCSSGGGC-CCCEECSCCEETTEECC--CEEEEECCHHHHHHTTTTTTCCC
T ss_pred C---EEE--ECCCCCC-CEEEEEEECCCCCCCCCCCC-CCCCCCCCEEECCEECC--CCEEEEECCCHHHHHHHCCCCCC
T ss_conf 5---267--5058889-88999997488654688778-78988776578999827--84898652612554432012233
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC----CCEEEEECCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 57766665555689997632999999778999----97289728873299998782100022123478899836998230
Q 004533 502 NLGLNKVLWSSIRSPTRQLTWYKTTFRAPAGN----DPIALNLQSMGKGEAWVNGQSIGRYWVSFKTSKGNPSQTQYAVN 577 (746)
Q Consensus 502 ~~~~~~~~w~~~~~~~~~~~~yk~~F~~~~~~----d~~~Ld~~~~gKG~v~VNG~~lGRYW~~~~~~~ggPqqt~~~~~ 577 (746)
........|.+......+|+||+++|++++.. .+|||||+||+||+||||||||||||+++ ||||||
T Consensus 508 ~~~~~~~~~~~~~~~~~~P~fy~g~f~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~~-----GPQ~TL---- 578 (654)
T 3thd_A 508 DSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPAR-----GPQLTL---- 578 (654)
T ss_dssp --------------CCCCCEEEEEEECCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTTT-----CSCCCE----
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC-----CCEEEE----
T ss_conf 33222334456666788877999999726777888877799678887079998980254254777-----976888----
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCC-CCEEEEEEECCCCC-------CCEEEEEE
Q ss_conf 122200000110133223467643566-63599998316998-------62299843
Q 004533 578 TVTSIHFCAIIKATNTYHVPRAFLKPT-GNLLVLLEEENGNP-------LGITVDTI 626 (746)
Q Consensus 578 ~~~~~~~~~~~~~~~~Y~vP~~~Lk~g-~N~lvi~E~~~~~~-------~~i~~~~~ 626 (746)
| ||++|||+| .|+|||||+++... ..|+|.+.
T Consensus 579 ----------------Y-vP~p~Lk~G~~NeIiVfEle~~~~~~~~~~~~~i~~~~~ 618 (654)
T 3thd_A 579 ----------------F-VPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDR 618 (654)
T ss_dssp ----------------E-ECGGGCCSSSCEEEEEEESSCCSCSSSCGGGSEEEEESS
T ss_pred ----------------E-ECHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC
T ss_conf ----------------9-648995889984699999516876555566525996355
No 3
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=943.98 Aligned_cols=496 Identities=27% Similarity=0.485 Sum_probs=403.4
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 91889999998599999872226445886884355781269999999998793799702752232247799782353038
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVA 80 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG~P~WL~~~p 80 (746)
+|+++|++||++|+|+|++||||+.|||+||+|||+|..|+++|+++|+++||+||+|+||||||||++||+|.||.+.+
T Consensus 38 ~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~ 117 (612)
T 3d3a_A 38 YWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKK 117 (612)
T ss_dssp GHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGST
T ss_pred HHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCC
T ss_conf 99999999997399899972707732898983480689899999999997799999956854466011489735422478
Q ss_pred CEEEECCCCCCE-----------------------------EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEE
Q ss_conf 804313899912-----------------------------20367787765689990579999998986299-742398
Q 004533 81 GIVFRSDNKPYK-----------------------------IENEYQTIEPAFHEKGPPYVLWAAKMAVDFHT-GVPWVM 130 (746)
Q Consensus 81 ~~~~Rt~~~~y~-----------------------------iENEYg~~~~~~g~~d~~Ym~~L~~~~~~~gi-~vp~~~ 130 (746)
++.+|++++.|+ ||||||+ |+ .+++|++++++++++.|+ ++|+++
T Consensus 118 ~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~----yg-~~~~y~~~l~~~l~~~g~~~vp~~~ 192 (612)
T 3d3a_A 118 DIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGA----FG-IDKPYISEIRDMVKQAGFTGVPLFQ 192 (612)
T ss_dssp TCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGG----TC-CCHHHHHHHHHHHHHHTCCSSCEEE
T ss_pred CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----CC-CHHHHHHHHHHHHHHCCCCCHHHEE
T ss_conf 833437998999999999999999874110006997778740344565----57-6599999999999871899603300
Q ss_pred ECCC-----CCCCCCCCCCCCCCCC----CCCCC--CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 0478-----9999731277987557----88879--99999992320136532333479886589888999999999818
Q 004533 131 CKQD-----DAPGPVINACNGMRCG----ETFKG--PNSPNKPSIWTEDWTSFYQVWGGKPYIRSAQDIAFHVALFIAKN 199 (746)
Q Consensus 131 ~~~~-----~~~~~~i~~~~g~~~~----~~~~~--~~~p~~P~~~tE~~~Gwf~~WG~~~~~~~~~~~~~~~~~~l~~g 199 (746)
|+.. ...+++++++| |.++ +.+.. +.+|++|.|++|||+|||++||++++.+++++++.+++++|++|
T Consensus 193 ~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g 271 (612)
T 3d3a_A 193 CDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRN 271 (612)
T ss_dssp EECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 04563222577787666455-67772178999999874558996200234676501247776679999999999999869
Q ss_pred CEEEEEEEECCCCCCCCCCCC----C--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCC
Q ss_conf 824344332275687888877----5--3224678899776799887127999999999964158877886521-24788
Q 004533 200 GSYVNYYMYHGGTNFGRTAAA----F--MITGYYDQAPLDEYGLVREPKWGHLKELHAAIKLCSRPLLTGTQNV-ISLGQ 272 (746)
Q Consensus 200 ~s~~n~YM~hGGTNfG~~~ga----~--~~TSYDYdAPL~E~G~~~tpKY~~lR~l~~~l~~~~~~l~~~~p~~-~~~~~ 272 (746)
+| +||||||||||||+|+|+ + ++|||||||||+|+|++ ||||.++|+++.. + +..+.+.+ .|.
T Consensus 272 ~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~-~~ky~~lr~~~~~---~---~~~~~~~~~~p~-- 341 (612)
T 3d3a_A 272 IS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV-TPKYLEVRNLLGN---Y---LPEGETLPEIPD-- 341 (612)
T ss_dssp CE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC-CHHHHHHHHHHTT---S---SCTTCCCCCCCC--
T ss_pred CC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC-CHHHHHHHHHHHH---H---CCCCCCCCCCCC--
T ss_conf 96-686353013477856666887766414531368724757873-2789999999998---5---346777677888--
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCCEEEEEECCEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 52146752166520243211586640699972625412772122147887200012011000123333457546881356
Q 004533 273 LQEAFVFEETSGVCAAFLVNNDERKAVTVLFRNISYELPRKSISILPDCKTVAFNTERVSTQYNKRSKTSNLKFDSDEKW 352 (746)
Q Consensus 273 ~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~lp~~sv~il~~~~~v~~nt~~v~~~~~~~~~~~~~~~~~~~~w 352 (746)
+.+. +.+|++++. ++ ...|
T Consensus 342 ~~~~-------------------------------~~~~~~~~~----------~~--------------------~~l~ 360 (612)
T 3d3a_A 342 SIPT-------------------------------IAIPTIKMT----------EM--------------------AVLF 360 (612)
T ss_dssp CCCB-------------------------------CCEEEEECC----------EE--------------------EEGG
T ss_pred CCCC-------------------------------CCCCCEEEE----------EE--------------------EEHH
T ss_conf 8764-------------------------------545658774----------26--------------------1588
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCEEEEEEECCEEEEEEECCCCCEE
Q ss_conf 57433110357643245641122046788886699999740699999875573673469999999989987643777601
Q 004533 353 EEYREAILNFDNTLLRAEGLLDQISAAKDASDYFWYTFRFHYNSSNAQAPLDVQSHGHILHAFVNGEYTGSAHGSHDNVS 432 (746)
Q Consensus 353 ~~~~e~~~~~~~~~~~~p~~~Eql~~t~d~~gy~~Y~t~~~~~~~~~~~~L~i~~~~d~~~vfvNG~~~G~~~~~~~~~~ 432 (746)
+.+.+++. ...|.+||||+|+ +||+||||++.... ....|++.+++|+++|||||+++|++++......
T Consensus 361 ~~~~~~~~------~~~p~~~E~l~q~---~gy~lY~t~i~~~~--~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~ 429 (612)
T 3d3a_A 361 DNLPHPKE------SEDIRTMEAFDQG---WGSILYRTSLSASD--KEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGV 429 (612)
T ss_dssp GGCCCCEE------ESSCCBGGGGTCC---SSEEEEEEEECCBS--SCEEEEEEEEESEEEEEETTEEEEEEETTTTCCE
T ss_pred HHCCCCCC------CCCCCCHHHHCCC---CCEEEEEEEECCCC--CCCEEEECCCCEEEEEEECCEEEEEEECCCCCCE
T ss_conf 84788634------7898899995987---77599998854788--8754985478708999999999999981147726
Q ss_pred EEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE-EEECC----EECCCCCCE-EEECCCCCHHHCCCCCCCC
Q ss_conf 69973342258985489997438974541243540062659-99898----205558836-9611673010201357766
Q 004533 433 FTLRNTVHLRQGTNDGALLSVTVGLPDSGAFLERKVAGVHR-VRVQD----KSFTNCSWG-YQVGLIGEKLQIYSNLGLN 506 (746)
Q Consensus 433 ~~~~~~~~l~~g~~~l~iLve~~Gr~n~G~~~~~~~kGi~g-V~l~~----~~l~~~~W~-~~~~l~ge~~~~~~~~~~~ 506 (746)
+.+ ++..|.++|+||||||||+|||+.+ .++|||+| |+|++ .+|+ +|+ |+++|+++.. +
T Consensus 430 ~~~----~~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~V~l~~~~~~~~l~--~W~~y~l~l~~~~~--------~ 494 (612)
T 3d3a_A 430 VKL----PPLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEKVELQSDKGVELVK--DWQVYTIPVDYSFA--------R 494 (612)
T ss_dssp EEE----CCBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEEEEEEETTEEEECC--CEEEEEECCCHHHH--------H
T ss_pred EEE----ECCCCCCEEEEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCEECC--CCEEEEECCCCCCC--------C
T ss_conf 986----5378985899999956987668545-5798777626985886743436--86699834676422--------2
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE
Q ss_conf 66555568999763299999977899997289728873299998782100022123478899836998230122200000
Q 004533 507 KVLWSSIRSPTRQLTWYKTTFRAPAGNDPIALNLQSMGKGEAWVNGQSIGRYWVSFKTSKGNPSQTQYAVNTVTSIHFCA 586 (746)
Q Consensus 507 ~~~w~~~~~~~~~~~~yk~~F~~~~~~d~~~Ld~~~~gKG~v~VNG~~lGRYW~~~~~~~ggPqqt~~~~~~~~~~~~~~ 586 (746)
++.|.+.....++|+|||++|++|++.| |||||+|||||+|||||+||||||+ + ||||||
T Consensus 495 ~~~~~~~~~~~~~p~~yk~~f~~~~~~D-t~Ld~~g~gKG~vwVNG~nlGRYW~-~-----GPqqtl------------- 554 (612)
T 3d3a_A 495 DKQYKQQENAENQPAYYRSTFNLNELGD-TFLNMMNWSKGMVWVNGHAIGRYWE-I-----GPQQTL------------- 554 (612)
T ss_dssp SSCCBC-----CCCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET-T-----CSCCEE-------------
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCC-EEEECCCCCCEEEEECCEEEEEEEE-C-----CCEEEE-------------
T ss_conf 3553456777889889999998899873-8996577873799998875890895-2-----988998-------------
Q ss_pred EECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
Q ss_conf 11013322346764356663599998316998622998430
Q 004533 587 IIKATNTYHVPRAFLKPTGNLLVLLEEENGNPLGITVDTIA 627 (746)
Q Consensus 587 ~~~~~~~Y~vP~~~Lk~g~N~lvi~E~~~~~~~~i~~~~~~ 627 (746)
| ||++|||+|.|+||||||++..+..|++++..
T Consensus 555 -------Y-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~~p 587 (612)
T 3d3a_A 555 -------Y-VPGCWLKKGENEIIILDMAGPSKAETEGLRQP 587 (612)
T ss_dssp -------E-ECGGGCCSEEEEEEEEESSCCSSSEEEEESSC
T ss_pred -------E-ECHHHCCCCCCEEEEEEECCCCCCEEEEECCC
T ss_conf -------8-15899178974899999768988548854665
No 4
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=875.11 Aligned_cols=593 Identities=23% Similarity=0.348 Sum_probs=452.8
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 91889999998599999872226445886884355781269999999998793799702752232247799782353038
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVA 80 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG~P~WL~~~p 80 (746)
+|+|+|+||||+|+|+|++|||||+|||+||+|||+|++||++||++|+++||+|||||||||||||++||+|+||+++|
T Consensus 37 ~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p 116 (971)
T 1tg7_A 37 LYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVD 116 (971)
T ss_dssp GHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCS
T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCEEECCCC
T ss_conf 89999999997099999996467770898883224566789999999998599899705874211444787315603568
Q ss_pred CEEEECCCCCCE-----------------------------EECCCCCCC-CCCCCCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 804313899912-----------------------------203677877-65689990579999998986299742398
Q 004533 81 GIVFRSDNKPYK-----------------------------IENEYQTIE-PAFHEKGPPYVLWAAKMAVDFHTGVPWVM 130 (746)
Q Consensus 81 ~~~~Rt~~~~y~-----------------------------iENEYg~~~-~~~g~~d~~Ym~~L~~~~~~~gi~vp~~~ 130 (746)
+ ++|++++.|+ ||||||+.. +.++..+++||++|++++|++|++||++|
T Consensus 117 ~-~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~t 195 (971)
T 1tg7_A 117 G-ILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFIS 195 (971)
T ss_dssp S-CTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred C-EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 8-754799899999999999999998643201799777873266567666665316699999999999997099833999
Q ss_pred ECCCC----CCC---CCCCC-----C-CCCCCCCC-------CCC-------CCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 04789----999---73127-----7-98755788-------879-------9999999232013653233347988658
Q 004533 131 CKQDD----APG---PVINA-----C-NGMRCGET-------FKG-------PNSPNKPSIWTEDWTSFYQVWGGKPYIR 183 (746)
Q Consensus 131 ~~~~~----~~~---~~i~~-----~-~g~~~~~~-------~~~-------~~~p~~P~~~tE~~~Gwf~~WG~~~~~~ 183 (746)
|++.. .+. +.++. + .+++|.+. |.. ..+|++|+|++|||+|||++||+.+++|
T Consensus 196 n~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~ 275 (971)
T 1tg7_A 196 NDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAK 275 (971)
T ss_dssp CBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHH
T ss_pred ECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 54754455465433573248753777665656775542000001569998642389999799813785756778876566
Q ss_pred CHHHHHHHH-----HHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHCC
Q ss_conf 988899999-----999981882434433227568788887753224678899776799887-12799999999996415
Q 004533 184 SAQDIAFHV-----ALFIAKNGSYVNYYMYHGGTNFGRTAAAFMITGYYDQAPLDEYGLVRE-PKWGHLKELHAAIKLCS 257 (746)
Q Consensus 184 ~~~~~~~~~-----~~~l~~g~s~~n~YM~hGGTNfG~~~ga~~~TSYDYdAPL~E~G~~~t-pKY~~lR~l~~~l~~~~ 257 (746)
++++.+..+ ..++++|++++||||||||||||+++|+..+|||||+|||+|+|++ + |||.++|+|+++++.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~g~~~~tSYDy~Apl~E~G~~-t~~ky~elr~l~~~l~~~~ 354 (971)
T 1tg7_A 276 CAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPGGYTSYDYGSAISESRNI-TREKYSELKLLGNFAKVSP 354 (971)
T ss_dssp HHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCBCTTSCSBCCTTCSBCTTCCC-CSHHHHHHHHHHHHHHTCH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCEECCCCCC-CHHHHHHHHHHHHHHHHCH
T ss_conf 635576899999999999779978999971043577656787730052347560767883-6468999999999998675
Q ss_pred CCCCCCCCCCCC--------------CCC--CCEEEEE------------------------------------------
Q ss_conf 887788652124--------------788--5214675------------------------------------------
Q 004533 258 RPLLTGTQNVIS--------------LGQ--LQEAFVF------------------------------------------ 279 (746)
Q Consensus 258 ~~l~~~~p~~~~--------------~~~--~~~~~~y------------------------------------------ 279 (746)
+ ++.+++...+ +.+ ...+..|
T Consensus 355 ~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~s 433 (971)
T 1tg7_A 355 G-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDS 433 (971)
T ss_dssp H-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESSTTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCC
T ss_pred H-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCE
T ss_conf 7-651587667654446787438999434789851899996567877774489999755898776167787367889730
Q ss_pred ----------------EC-------C-----------------------------CCCE-E---------EEEECCCCCC
Q ss_conf ----------------21-------6-----------------------------6520-2---------4321158664
Q 004533 280 ----------------EE-------T-----------------------------SGVC-A---------AFLVNNDERK 297 (746)
Q Consensus 280 ----------------~~-------~-----------------------------~~~~-~---------~Fl~n~~~~~ 297 (746)
.. . .+.| + .|+.|.....
T Consensus 434 ki~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 513 (971)
T 1tg7_A 434 KIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHEFAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVST 513 (971)
T ss_dssp EEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEEEEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCS
T ss_pred EEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCC
T ss_conf 89953432487689986200479888789049999848997337999537620350576653058436854999504688
Q ss_pred EEE-EEECCE-----------EEECCC----------------------------CEEEE-------------------C
Q ss_conf 069-997262-----------541277----------------------------21221-------------------4
Q 004533 298 AVT-VLFRNI-----------SYELPR----------------------------KSISI-------------------L 318 (746)
Q Consensus 298 ~~~-v~~~~~-----------~~~lp~----------------------------~sv~i-------------------l 318 (746)
..+ |++.+. .+-.|+ ||++| +
T Consensus 514 ~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~ 593 (971)
T 1tg7_A 514 ARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTASSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVV 593 (971)
T ss_dssp SCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHHTCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEE
T ss_pred CEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEE
T ss_conf 54899979989999645764108655446766667656655678518986670789999809889998524888227998
Q ss_pred --C-CCCCCCCCCCEEECCCCCCC-CC---C-----CCCCC-CHHHHHHHHH---HHCCCCCCCCCCCCCHHHHCC----
Q ss_conf --7-88720001201100012333-34---5-----75468-8135657433---110357643245641122046----
Q 004533 319 --P-DCKTVAFNTERVSTQYNKRS-KT---S-----NLKFD-SDEKWEEYRE---AILNFDNTLLRAEGLLDQISA---- 378 (746)
Q Consensus 319 --~-~~~~v~~nt~~v~~~~~~~~-~~---~-----~~~~~-~~~~w~~~~e---~~~~~~~~~~~~p~~~Eql~~---- 378 (746)
| +|++|.||+++|.++.+... +. + +.+.. ..+.|+...+ ..+.+++...+.....||.+.
T Consensus 594 ~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~l~Wk~~~~~pe~~~~~dDs~W~~~~l~~~~n~~~p~ 673 (971)
T 1tg7_A 594 GAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKSLKWKSVDTLPEAKNTYDDSAWTSADHAYTNNSAHSL 673 (971)
T ss_dssp SCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGGSCCEEEESCGGGSTTCCCTTSEECCCSSCCCTTCCC
T ss_pred ECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 56888668999998840577468618875477765424656677882895778434688887776589870213434778
Q ss_pred C----CCCCCE------EEEEEEEECCCCCCCCCEEEC---CCCEEEEEEECCEEEEEEECCCC--CEEEEEEEEEECCC
Q ss_conf 7----888866------999997406999998755736---73469999999989987643777--60169973342258
Q 004533 379 A----KDASDY------FWYTFRFHYNSSNAQAPLDVQ---SHGHILHAFVNGEYTGSAHGSHD--NVSFTLRNTVHLRQ 443 (746)
Q Consensus 379 t----~d~~gy------~~Y~t~~~~~~~~~~~~L~i~---~~~d~~~vfvNG~~~G~~~~~~~--~~~~~~~~~~~l~~ 443 (746)
+ .+.++| +|||++|..+++ ...|.+. ++++.++|||||+++|+..+... ..++.+.+ ..|+.
T Consensus 674 t~p~~~~~sdYGf~~G~lwYR~~F~~~~~--~~~L~~~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~ 750 (971)
T 1tg7_A 674 QTPTSLFASDYGYHTGALLFRGHFTANGK--EKTFFVQTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQS 750 (971)
T ss_dssp SSSSCCBGGGGTCCSSCEEEEEEEECCSC--CCEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCT
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCC--CEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECC
T ss_conf 87766777766866742999989987886--0389997157654239999999997655467875567668998-67447
Q ss_pred -CCCEEEEEEECCCCCCC---CCCCCCCCCCEEEEEECCE-------ECCCCCC--EE---------EECCCCCHHHCCC
Q ss_conf -98548999743897454---1243540062659998982-------0555883--69---------6116730102013
Q 004533 444 -GTNDGALLSVTVGLPDS---GAFLERKVAGVHRVRVQDK-------SFTNCSW--GY---------QVGLIGEKLQIYS 501 (746)
Q Consensus 444 -g~~~l~iLve~~Gr~n~---G~~~~~~~kGi~gV~l~~~-------~l~~~~W--~~---------~~~l~ge~~~~~~ 501 (746)
++|+|+|||+|+|+.|+ |+++++.++||.+|.|.+. +|+.+.| .| +.||.+|.+++|+
T Consensus 751 gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~~v~L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~ 830 (971)
T 1tg7_A 751 GKNYVITVVIDNMGLDEDWTIGSEDMKNPRGIIQYSLSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQ 830 (971)
T ss_dssp TCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEEEEETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTS
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99518999993677776656673301268762488996457987449985055665555433454454444342225327
Q ss_pred CCCCCCCCCCCCCC-C---CCCCEEEEEEEE--CCCCCC-CEEEEECCCC------EEEEEECCEECCCCCCCCCCCCCC
Q ss_conf 57766665555689-9---976329999997--789999-7289728873------299998782100022123478899
Q 004533 502 NLGLNKVLWSSIRS-P---TRQLTWYKTTFR--APAGND-PIALNLQSMG------KGEAWVNGQSIGRYWVSFKTSKGN 568 (746)
Q Consensus 502 ~~~~~~~~w~~~~~-~---~~~~~~yk~~F~--~~~~~d-~~~Ld~~~~g------KG~v~VNG~~lGRYW~~~~~~~gg 568 (746)
+. .+.+.|++.+. + ..+++|||++|+ +|++.| |+.|+|..|+ ||++||||++|||||+.+ +
T Consensus 831 p~-~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~-----~ 904 (971)
T 1tg7_A 831 PQ-PPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPSGYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI-----G 904 (971)
T ss_dssp SS-CCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCTTEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT-----C
T ss_pred CC-CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCC-----C
T ss_conf 99-98346648787678888850899999745687789830899857888777563289999999874012788-----7
Q ss_pred CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCC-CCCCCEEEE----EEECCCCCCCEEEEEE
Q ss_conf 836998230122200000110133223467643-566635999----9831699862299843
Q 004533 569 PSQTQYAVNTVTSIHFCAIIKATNTYHVPRAFL-KPTGNLLVL----LEEENGNPLGITVDTI 626 (746)
Q Consensus 569 Pqqt~~~~~~~~~~~~~~~~~~~~~Y~vP~~~L-k~g~N~lvi----~E~~~~~~~~i~~~~~ 626 (746)
||+++ |||+.|| |+|.|+|+| +|++|++|..|++++.
T Consensus 905 pqr~y---------------------~VP~giLn~~G~N~i~vrv~~~~~~Gg~~~~i~l~~~ 946 (971)
T 1tg7_A 905 PQTSF---------------------PVPEGILNYHGTNWLALSLWAQEDNGAKLDSFELINT 946 (971)
T ss_dssp SCCEE---------------------EECBTTBCTTSEEEEEEEEEECSTTCBCCSCEEEEEC
T ss_pred CCEEE---------------------ECCHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEC
T ss_conf 87799---------------------7797993869963899998627777898650699975
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=807.56 Aligned_cols=592 Identities=20% Similarity=0.293 Sum_probs=409.8
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 91889999998599999872226445886884355781269999999998793799702752232247799782353038
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLHDVA 80 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG~P~WL~~~p 80 (746)
+|+|+|+||||+|+|+|++|||||+|||+||+|||+|++||++||++|+|+||+|||||||||||||++||+|+||++.|
T Consensus 57 ~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~ 136 (1003)
T 3og2_A 57 LYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVK 136 (1003)
T ss_dssp GHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCC
T ss_conf 99999999997399889985164434897887355555559999999998599899327863333527887662102599
Q ss_pred CEEEECCCCCCE-----------------------------EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 804313899912-----------------------------203677877656899905799999989862997423980
Q 004533 81 GIVFRSDNKPYK-----------------------------IENEYQTIEPAFHEKGPPYVLWAAKMAVDFHTGVPWVMC 131 (746)
Q Consensus 81 ~~~~Rt~~~~y~-----------------------------iENEYg~~~~~~g~~d~~Ym~~L~~~~~~~gi~vp~~~~ 131 (746)
+ ++|++++.|+ ||||||++.+.++.+|++||+||++|++++||+|||+||
T Consensus 137 ~-~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~ 215 (1003)
T 3og2_A 137 G-KLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINN 215 (1003)
T ss_dssp S-CTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCC
T ss_pred C-EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 7-005799899999999999999998776423799789997245457533445677789999999999974993679976
Q ss_pred CCCC----CCCCCCCCC---------CCCCCCCC--CC---C---------CCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 4789----999731277---------98755788--87---9---------99999992320136532333479886589
Q 004533 132 KQDD----APGPVINAC---------NGMRCGET--FK---G---------PNSPNKPSIWTEDWTSFYQVWGGKPYIRS 184 (746)
Q Consensus 132 ~~~~----~~~~~i~~~---------~g~~~~~~--~~---~---------~~~p~~P~~~tE~~~Gwf~~WG~~~~~~~ 184 (746)
++.. .++.++.++ ++++|... |. . +.+|++|+||+|||+|||++||+++++++
T Consensus 216 d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~ 295 (1003)
T 3og2_A 216 DAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQC 295 (1003)
T ss_dssp BSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 88522465777655513330245666743036876555554157799876512899982887001433343588877777
Q ss_pred HHHHHHHH-----HHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 88899999-----9999818824344332275687888877532246788997767998871279999999999641588
Q 004533 185 AQDIAFHV-----ALFIAKNGSYVNYYMYHGGTNFGRTAAAFMITGYYDQAPLDEYGLVREPKWGHLKELHAAIKLCSRP 259 (746)
Q Consensus 185 ~~~~~~~~-----~~~l~~g~s~~n~YM~hGGTNfG~~~ga~~~TSYDYdAPL~E~G~~~tpKY~~lR~l~~~l~~~~~~ 259 (746)
+++++..+ +++|+.|+|++||||||||||||+|+++..+|||||||||+|+|+++||||.+||.+|.|++.+ ++
T Consensus 296 ~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~~~~~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~-~~ 374 (1003)
T 3og2_A 296 SALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLGHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVS-PG 374 (1003)
T ss_dssp HHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCBCTTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTC-TH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-HH
T ss_conf 33405999999999988568855788872164686535799841334678844646775834789999999987538-37
Q ss_pred CCCCCCCCCCC---CCCCEEEEEECCCCCEEEEEE-CCCC-----CCEEEEEEC--CEEEECCC---------CEEEECC
Q ss_conf 77886521247---885214675216652024321-1586-----640699972--62541277---------2122147
Q 004533 260 LLTGTQNVISL---GQLQEAFVFEETSGVCAAFLV-NNDE-----RKAVTVLFR--NISYELPR---------KSISILP 319 (746)
Q Consensus 260 l~~~~p~~~~~---~~~~~~~~y~~~~~~~~~Fl~-n~~~-----~~~~~v~~~--~~~~~lp~---------~sv~il~ 319 (746)
++.++|...+. ..+....++......-+.|+. ++.+ ...+++.++ .+++++|. +...|++
T Consensus 375 ~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~v 454 (1003)
T 3og2_A 375 YITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHV 454 (1003)
T ss_dssp HHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESSTTCCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEE
T ss_pred HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEE
T ss_conf 64556465887613489863899986489855999981578877761289994278876786788972788886555985
Q ss_pred -----CCCCCCCCCCEEECC-----------------------------------------------------------C
Q ss_conf -----887200012011000-----------------------------------------------------------1
Q 004533 320 -----DCKTVAFNTERVSTQ-----------------------------------------------------------Y 335 (746)
Q Consensus 320 -----~~~~v~~nt~~v~~~-----------------------------------------------------------~ 335 (746)
...+++|-|++|.+- .
T Consensus 455 tdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (1003)
T 3og2_A 455 TDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTAS 534 (1003)
T ss_dssp EEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEEEEESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECC
T ss_pred ECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECC
T ss_conf 01324884899972411788998998899997889983489993344445678873642787058746895899988537
Q ss_pred ----------------------------------------------CCCC------------------------------
Q ss_conf ----------------------------------------------2333------------------------------
Q 004533 336 ----------------------------------------------NKRS------------------------------ 339 (746)
Q Consensus 336 ----------------------------------------------~~~~------------------------------ 339 (746)
+...
T Consensus 535 ~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~~~~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev 614 (1003)
T 3og2_A 535 SARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEI 614 (1003)
T ss_dssp SSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCSCSSSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEE
T ss_pred CCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEE
T ss_conf 96499997999999970688764135534688764543456788872899788379998971999999843589813799
Q ss_pred C--------------------------------C-CCCCCCC--HHHHHH---HHHHHCCCCCC---------------C
Q ss_conf 3--------------------------------4-5754688--135657---43311035764---------------3
Q 004533 340 K--------------------------------T-SNLKFDS--DEKWEE---YREAILNFDNT---------------L 366 (746)
Q Consensus 340 ~--------------------------------~-~~~~~~~--~~~w~~---~~e~~~~~~~~---------------~ 366 (746)
+ . +...+.. .+.|.. ++|..+.+++. +
T Consensus 615 ~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~lP~L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p 694 (1003)
T 3og2_A 615 IGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAP 694 (1003)
T ss_dssp ESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCCCCGGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSC
T ss_pred EECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 93687754899999985148637875799832778765488778887142278865689998432606676565685567
Q ss_pred CCCC--CCHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEECC-CCEEEEEEECCEEEEEEECCCCC--EEEEEEEEEEC
Q ss_conf 2456--4112204678888669999974069999987557367-34699999999899876437776--01699733422
Q 004533 367 LRAE--GLLDQISAAKDASDYFWYTFRFHYNSSNAQAPLDVQS-HGHILHAFVNGEYTGSAHGSHDN--VSFTLRNTVHL 441 (746)
Q Consensus 367 ~~~p--~~~Eql~~t~d~~gy~~Y~t~~~~~~~~~~~~L~i~~-~~d~~~vfvNG~~~G~~~~~~~~--~~~~~~~~~~l 441 (746)
...| +...+++. ++|.+|||.+|.....++...|.+++ .+..+.|||||+|+|+..+.... .++++.++ .|
T Consensus 695 ~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~~~v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP-~L 770 (1003)
T 3og2_A 695 LKTPVSLYGSDYGF---HAGTLLFRGRFTARTARQQLFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLD-RL 770 (1003)
T ss_dssp CCSSSCCBGGGGTC---CSSCEEEEEEEECSSSSEEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEEC-SC
T ss_pred CCCCCEEECCCCCC---CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECC-CC
T ss_conf 89984757645676---448789861897788714899998151243448999997822554788656566699787-55
Q ss_pred CCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCEEEEEECCEECC--CCCCEEEECCCCC------------------HH
Q ss_conf 589-85489997438974-54--1243540062659998982055--5883696116730------------------10
Q 004533 442 RQG-TNDGALLSVTVGLP-DS--GAFLERKVAGVHRVRVQDKSFT--NCSWGYQVGLIGE------------------KL 497 (746)
Q Consensus 442 ~~g-~~~l~iLve~~Gr~-n~--G~~~~~~~kGi~gV~l~~~~l~--~~~W~~~~~l~ge------------------~~ 497 (746)
+.| +|+|+|+|+|||+. ++ |..-.+.++||++..|.+.+-+ .-.|+.+..+.|| ..
T Consensus 771 ~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~~~l~g~~~~~~~~~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~ 850 (1003)
T 3og2_A 771 VRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGILDYALTSSSGANVSISWKLTGNLGGEDYRDVFRGPLNEGGLFFERQ 850 (1003)
T ss_dssp CTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEEEEEEETTSCBCCCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHH
T ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 67996089999928876556466755444887500005237887766305898413588656786656655886557741
Q ss_pred HCCCCCCCCCCCCCCC--------CC----CCCCCEEEEEEEEC--C-CCCC-CEEEEECC-----CCEEEEEECCEECC
Q ss_conf 2013577666655556--------89----99763299999977--8-9999-72897288-----73299998782100
Q 004533 498 QIYSNLGLNKVLWSSI--------RS----PTRQLTWYKTTFRA--P-AGND-PIALNLQS-----MGKGEAWVNGQSIG 556 (746)
Q Consensus 498 ~~~~~~~~~~~~w~~~--------~~----~~~~~~~yk~~F~~--~-~~~d-~~~Ld~~~-----~gKG~v~VNG~~lG 556 (746)
++|+|+.. ...|++. ++ ...+.+||+|+|++ | ++.| |+.|.+.. --|.++||||+++|
T Consensus 851 GwHLPg~~-~~~W~~~~~~~~~~~sp~~g~~~~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~G 929 (1003)
T 3og2_A 851 GFHLPSPP-LSDFTHGPSSSSSSSSPLDGIAHAGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYG 929 (1003)
T ss_dssp TTTSSSCC-GGGSBCCCTTSTTCCCTTTCBSSSEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEE
T ss_conf 32389889-43233244454456784557788845799878526899656710389997779887635899997020210
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCC-CCCCEEEE----EEECCCCCCCEEEEE
Q ss_conf 0221234788998369982301222000001101332234676435-66635999----983169986229984
Q 004533 557 RYWVSFKTSKGNPSQTQYAVNTVTSIHFCAIIKATNTYHVPRAFLK-PTGNLLVL----LEEENGNPLGITVDT 625 (746)
Q Consensus 557 RYW~~~~~~~ggPqqt~~~~~~~~~~~~~~~~~~~~~Y~vP~~~Lk-~g~N~lvi----~E~~~~~~~~i~~~~ 625 (746)
||-+++ |||.++ .||..+|+ .|.|+|.| +++.|+.+..++++.
T Consensus 930 kyv~~i-----GPQt~F---------------------pvP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~ 977 (1003)
T 3og2_A 930 KYVSNI-----GPQTEF---------------------PVPEGILDYNGDNWIGVALWALESRGAKVPGLALKS 977 (1003)
T ss_dssp EEETTT-----CCCCEE---------------------EECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEE
T ss_pred EECCCC-----CCCCEE---------------------CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE
T ss_conf 221787-----886030---------------------599201127996269999984268888777159997
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=194.67 Aligned_cols=108 Identities=20% Similarity=0.289 Sum_probs=92.3
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC---CCCEEEE
Q ss_conf 1889999998599999872226445886884355781269999999998793799702752232247799---7823530
Q 004533 2 WPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGG---LPIWLHD 78 (746)
Q Consensus 2 W~d~l~k~ka~Gln~v~~yv~Wn~hEp~~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE~~~GG---~P~WL~~ 78 (746)
|++++++||++|+|+|++||+|+.|||+||+|||+ .|++||++|+++||+|||| |||||++|| +|.||.+
T Consensus 75 ~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~---~LD~~ldla~e~GL~VIL~----i~aeW~~ggta~~P~WL~~ 147 (552)
T 3u7v_A 75 MAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFS---YLDLLLEQARERKVRLVLL----WFGTWKNSSPSYAPEWVKL 147 (552)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH---HHHHHHHHHHHTTCEEEEE----EEEEEETTBCTTSCHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEE----ECCCCCCCCCCCCCCHHHC
T ss_conf 19999999980998899986243248989846806---4999999999879999998----4120146887678805651
Q ss_pred CCCE--EEECCC-----------CCCE----------------------------EECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 3880--431389-----------9912----------------------------2036778776568999057999999
Q 004533 79 VAGI--VFRSDN-----------KPYK----------------------------IENEYQTIEPAFHEKGPPYVLWAAK 117 (746)
Q Consensus 79 ~p~~--~~Rt~~-----------~~y~----------------------------iENEYg~~~~~~g~~d~~Ym~~L~~ 117 (746)
+|++ ++|+.+ +.|+ ||||||++ + +++.|++.+++
T Consensus 148 d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~~----g-~~~~Y~~~~~~ 222 (552)
T 3u7v_A 148 DDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGTY----G-SVRDFGPAAQK 222 (552)
T ss_dssp CTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSBS----S-CSSCCSHHHHH
T ss_pred CCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----C-CCCHHHHHHHH
T ss_conf 766575248899967514798867899999999999999999971899948999961567777----7-73215199999
Q ss_pred HHHH
Q ss_conf 8986
Q 004533 118 MAVD 121 (746)
Q Consensus 118 ~~~~ 121 (746)
.+|+
T Consensus 223 aFR~ 226 (552)
T 3u7v_A 223 VFNG 226 (552)
T ss_dssp HHHS
T ss_pred HHHH
T ss_conf 9998
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=178.94 Aligned_cols=198 Identities=15% Similarity=0.121 Sum_probs=132.4
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC----CCCCCCCCE
Q ss_conf 91889999998599999872226445886-8843557812699999999987937997027522322----477997823
Q 004533 1 MWPSLIAKAKEGGLDVIQTYVFWNLHEPQ-KGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESE----WTYGGLPIW 75 (746)
Q Consensus 1 ~W~d~l~k~ka~Gln~v~~yv~Wn~hEp~-~g~~df~G~~dl~~fl~~a~~~gl~vilrpGPYicaE----~~~GG~P~W 75 (746)
+|+++|++||++|+|+|++||.|+.|||+ ||+|||+ .+++||++|+++||+||+++++|+|+| |..+++|.|
T Consensus 30 ~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~W 106 (516)
T 1vem_A 30 TFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSW 106 (516)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGG
T ss_pred HHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHH
T ss_conf 9999999999739999998423454138899936369---9999999999779989999311013777677877899977
Q ss_pred EEEC-C--CEEEECCCC-----------------------------------------------------CCEEECCCCC
Q ss_conf 5303-8--804313899-----------------------------------------------------9122036778
Q 004533 76 LHDV-A--GIVFRSDNK-----------------------------------------------------PYKIENEYQT 99 (746)
Q Consensus 76 L~~~-p--~~~~Rt~~~-----------------------------------------------------~y~iENEYg~ 99 (746)
|.+. | ++..++.+. .|.||||||.
T Consensus 107 L~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~ 186 (516)
T 1vem_A 107 VWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGY 186 (516)
T ss_dssp GGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCT
T ss_pred HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87259964326688999898453542346763899999999999997438998999622455345435655433357678
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 776-5689990579999998986299742398047899997312779875578887999999992320136532333479
Q 004533 100 IEP-AFHEKGPPYVLWAAKMAVDFHTGVPWVMCKQDDAPGPVINACNGMRCGETFKGPNSPNKPSIWTEDWTSFYQVWGG 178 (746)
Q Consensus 100 ~~~-~~g~~d~~Ym~~L~~~~~~~gi~vp~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~p~~P~~~tE~~~Gwf~~WG~ 178 (746)
++. .+-.-++.+++.+++.+++..=+++-. +... |... ..|..-..|..+ ..++++||+++||.
T Consensus 187 ~g~~~~~~y~~~~~~~fr~~l~~~ygtl~~l-n~aW-----------g~~~-~~~~~i~~P~~~--~~~~~~gw~s~~~~ 251 (516)
T 1vem_A 187 PSRGKFQAYTEFAKSKFRLWVLNKYGSLNEV-NKAW-----------GTKL-ISELAILPPSDG--EQFLMNGYLSMYGK 251 (516)
T ss_dssp TSCCCCCCCSHHHHHHHHHHHHHHHSSHHHH-HHHH-----------TCCC-SSGGGCCSCSCH--HHHHHTGGGSHHHH
T ss_pred CCCCCHHCCCHHHHHHHHHHHHHHCCCHHHH-HHHH-----------CCCC-CCHHHHCCCCCC--CCCCCCCCHHHHCC
T ss_conf 7765420048999999999999862877778-8976-----------8797-889882786556--54357983366507
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCEE------EEEEEECCCCCCCC
Q ss_conf 886589888999999999818824------34433227568788
Q 004533 179 KPYIRSAQDIAFHVALFIAKNGSY------VNYYMYHGGTNFGR 216 (746)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~g~s~------~n~YM~hGGTNfG~ 216 (746)
......++.++..+.++++.+.+. +.+..--.|-+|-+
T Consensus 252 df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y 295 (516)
T 1vem_A 252 DYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQY 295 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTT
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECC
T ss_conf 29885637899999999998787548876842899847420168
No 8
>2jx9_A Latrophilin 1; lectin, beta-sandwich, disulphide, glycosylated, G-protein C receptor, membrane, receptor, transducer, transmembrane, CE adhesion; HET: NAG; NMR {Mus musculus} PDB: 2jxa_A*
Probab=1.00 E-value=1 Score=169.92 Aligned_cols=85 Identities=25% Similarity=0.493 Sum_probs=78.4
Q ss_pred CCCCCCEEEECCCCCEEEEEEEECCCCCC-CCCCC--C--CCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 59999411006999928788420148998-88999--9--8684005883578998838998239951597855999999
Q 004533 660 FGKKPTVQPSCPLGKKISKIVFASFGNPD-GDCER--Y--AVGSCHSSHSQGVVERACIGKSRCSIPLLSRYFGGDPCPG 734 (746)
Q Consensus 660 ~~~~~~~~L~C~~g~~Is~I~~A~YGr~~-~~C~~--~--~~~~C~~~~s~~~V~~~C~Gk~~C~i~a~~~~Fg~DPCpg 734 (746)
..|++.++|+|+.+++| +|.+|+|||++ ++|+. + .+++|++++++.+|+++|+||++|+|.|++.+|| |||||
T Consensus 12 ~CE~~~~~L~C~~~~~i-~I~~A~YGr~~~~~C~~~~~~~~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg-DPCpg 89 (106)
T 2jx9_A 12 ACEGYPIELRCPGSDVI-MVENANYGRTDDKICDADPFQMENVQCYLPDAFKIMSQRCNNRTQCVVVAGSDAFP-DPCPG 89 (106)
T ss_dssp EETTSEEEEECSTTEEE-EEEEEEEEBSCSSSSCCCHHHHSCCCBCCTHHHHHHHHHHTTBSEEEEESSGGGSC-CSSTT
T ss_pred ECCCCCEEEEECCCCEE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC-CCCCC
T ss_conf 66899989980999889-99866698899876699877454884079558899998767887538984656269-99999
Q ss_pred CCEEEEEEEEEC
Q ss_conf 741899999919
Q 004533 735 IHKALLVDAQCR 746 (746)
Q Consensus 735 t~KyL~V~Y~C~ 746 (746)
++|||+|+|+|.
T Consensus 90 t~KyL~V~y~C~ 101 (106)
T 2jx9_A 90 TYKYLEVQYDCV 101 (106)
T ss_dssp SCCEEEEEEEEE
T ss_pred CCEEEEEEEEEE
T ss_conf 648999999930
No 9
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=1.00 E-value=1 Score=167.32 Aligned_cols=84 Identities=29% Similarity=0.549 Sum_probs=78.1
Q ss_pred CCCCCCEEEECCCCCEEEEEEEECCCCCC-CCCC------CCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCC
Q ss_conf 59999411006999928788420148998-8899------9986840058835789988389982399515978559999
Q 004533 660 FGKKPTVQPSCPLGKKISKIVFASFGNPD-GDCE------RYAVGSCHSSHSQGVVERACIGKSRCSIPLLSRYFGGDPC 732 (746)
Q Consensus 660 ~~~~~~~~L~C~~g~~Is~I~~A~YGr~~-~~C~------~~~~~~C~~~~s~~~V~~~C~Gk~~C~i~a~~~~Fg~DPC 732 (746)
..|++.++|+||.| +| +|.+|+|||++ ++|+ ...+++|++++++.+|+++|+||++|+|.|++++|| |||
T Consensus 105 ~CE~~~~~L~C~~g-~I-~I~~A~yGr~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~FG-DPC 181 (195)
T 2zx2_A 105 ICEGSDSQLLCDRG-EI-RIQRANYGRRQHDVCSIGRPHQQLKNTNCLSQSTTSKMAERCDGKRQCIVKVSNSVFG-DPC 181 (195)
T ss_dssp EETTSEEEEECSSS-CE-EEEEEEEEBSCSSTTCTTCCGGGTCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred CCCCCCEEEEECCC-EE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCC-CCC
T ss_conf 03564400257699-78-9875568889988668888877743884079668899999879998747872703278-999
Q ss_pred CCCCEEEEEEEEEC
Q ss_conf 99741899999919
Q 004533 733 PGIHKALLVDAQCR 746 (746)
Q Consensus 733 pgt~KyL~V~Y~C~ 746 (746)
|+++|||+|+|.|.
T Consensus 182 ~gt~KyL~V~y~Cv 195 (195)
T 2zx2_A 182 VGTYKYLDVAYTCD 195 (195)
T ss_dssp TTSCCEEEEEEEEC
T ss_pred CCCCEEEEEEEEEC
T ss_conf 99876899999979
No 10
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=1.00 E-value=1 Score=164.35 Aligned_cols=84 Identities=30% Similarity=0.477 Sum_probs=77.5
Q ss_pred CCCCCCEEEECCCCCEEEEEEEECCCCCC-CCCCC----C--CCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCC
Q ss_conf 59999411006999928788420148998-88999----9--86840058835789988389982399515978559999
Q 004533 660 FGKKPTVQPSCPLGKKISKIVFASFGNPD-GDCER----Y--AVGSCHSSHSQGVVERACIGKSRCSIPLLSRYFGGDPC 732 (746)
Q Consensus 660 ~~~~~~~~L~C~~g~~Is~I~~A~YGr~~-~~C~~----~--~~~~C~~~~s~~~V~~~C~Gk~~C~i~a~~~~Fg~DPC 732 (746)
..|++.++|+||.| +| +|.+|+|||.+ ++|+. + .+++|++++++.+|+++|+||++|+|.|++.+|| |||
T Consensus 5 ~Ce~~~~~L~C~~g-~I-~I~~A~yGR~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~Fg-DPC 81 (195)
T 2zx2_A 5 TCEGSDALLQCDGA-KI-HIKRANYGRRQHDVCSIGRPDNQLTDTNCLSQSSTSKMAERCGGKSECIVPASNFVFG-DPC 81 (195)
T ss_dssp EETTSEEEEECTTS-EE-EEEEEEEEBSCSSTTCTTCCGGGSCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred ECCCCCEEEECCCC-EE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCC-CCC
T ss_conf 71499979886999-79-9997658989988688999876533776378740689998588987336876841068-999
Q ss_pred CCCCEEEEEEEEEC
Q ss_conf 99741899999919
Q 004533 733 PGIHKALLVDAQCR 746 (746)
Q Consensus 733 pgt~KyL~V~Y~C~ 746 (746)
|+++|||+|+|.|.
T Consensus 82 ~g~~KyL~V~y~C~ 95 (195)
T 2zx2_A 82 VGTYKYLDTKYSCV 95 (195)
T ss_dssp TTSCCEEEEEEEEE
T ss_pred CCCEEEEEEEEEEC
T ss_conf 97333533121602
Done!