BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004541
(746 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 382/714 (53%), Positives = 472/714 (66%), Gaps = 84/714 (11%)
Query: 47 IAEDVKDGCEGAVTASAVLQMPQEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAAL 106
I DV++G G LQ+P Q A VCWERFLH+R+++VLLVENDD TR++V AL
Sbjct: 43 ITMDVRNGSSGG------LQIPLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTAL 96
Query: 107 LRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPV 165
LRNC YEV EA+NG+QAWK+LEDL NHID+VLTEV MP LSG+ LL KI++HK+R+N+PV
Sbjct: 97 LRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPV 156
Query: 166 IMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCT-QTQ 224
IMMSS DSMGLVFKCLSKGAVDFLVKPIRKNELK LWQHVWRRC SSSGSGSES T QTQ
Sbjct: 157 IMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQ 216
Query: 225 KSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSDDGSGTQSSWTKKAVEVD-SPRHMSP 283
KS+KSK+++ S ++GS+DE+ NGSIG+N DGS DGSG QSSWTKKAV+VD SPR +S
Sbjct: 217 KSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVSL 276
Query: 284 SDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRS 343
D++ DSTCAQV+HSN E ++ V A KE Q+H+++ E+ RDL++ +R+
Sbjct: 277 WDRV----DSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTM-GRDLEISIRRN 331
Query: 344 LDLQLEYQTESPIKLVGT-KKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLA 402
DL LE + E K G ++ N + SSK ++ +G LDL+SESPSSK +E
Sbjct: 332 CDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHEDG--- 388
Query: 403 GAITKIIDSDKEDT-EYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTI 461
G+ K + S +D E EA N K LD N S+K S+EL +E S KR RG KD GT +
Sbjct: 389 GSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLV 448
Query: 462 QDDRNVLRRSDSSAFSRYNTASNVNKGPGGNIESAS-QVVNSLEIIKKGSDCGIQSHSNG 520
+DDRNVLRRS+ SAFSRYN ASN NK GGN+ S S Q NS ++IKK ++ HSN
Sbjct: 449 RDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKK-TEAAYDCHSNM 507
Query: 521 D---PLNQSSNGGSNNMDMGSTT-NNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKNDLL 576
+ P N S+ GSNN DM STT NNAF KP K S SS+V SSFQP L
Sbjct: 508 NESLPHNHRSHVGSNNFDMSSTTENNAFTKPGAPKVSSAGSSSVK---HSSFQP----LP 560
Query: 577 CSPRQVLLDKRDDLVASSVLVHPRSTQEQLTQHYDN--CHHLVHNMQQQHLPHDHDQLSL 634
C H++N ++LVH +++ LP
Sbjct: 561 C------------------------------DHHNNHASYNLVHVAERKKLP-------- 582
Query: 635 KKMAEAVPQCGSSNMLGGFVEGNAG--NYSINGSASGSNHGSNGQNGSSTAVNAGGMNVE 692
PQCGSSN+ +EGN NYS+NGS SGS HGSNG GSS +NAGGMN+
Sbjct: 583 -------PQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMG 635
Query: 693 SDNGIAGKSGSGGASGSGSGSGNR--IDKNKFADREAAVTKYRQKKTERCFRKK 744
SDNG AGK+G+G SGSGSGSG+ D+NK + REAA+TK+RQK+ ERCFRKK
Sbjct: 636 SDNG-AGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKK 688
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 332/692 (47%), Positives = 438/692 (63%), Gaps = 38/692 (5%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q++ Q +V WERFL +++L+VLLVENDDSTR VV+ALLR C YEV A NGL AW+ LE
Sbjct: 62 QKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLE 121
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVD 187
DL NHIDLVLTEV MP LSG+ LLSKI SHK K++PVIMMSS DSMG VFKCLSKGAVD
Sbjct: 122 DLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
Query: 188 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES +TQK K K + NN+GSN+++ +
Sbjct: 182 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNED 241
Query: 248 G----------SIGVNGGDGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQ 297
S+G N DGSD+GSGTQSSWTK+AVE+DSP+ MSP DQ ++ PDSTCAQ
Sbjct: 242 DDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQ 300
Query: 298 VIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESP-- 355
VIH +EI +R +P + + H+E N + L++G R + +EYQ+ SP
Sbjct: 301 VIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS-SPRE 355
Query: 356 IKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKED 415
+ + T+K + + SK + + D S + ++ + L +I + D +
Sbjct: 356 MSVNPTEKQHETLMPQSKTTRETD-------SRNTQNEPTTQTVDLISSIARSTDDKQVV 408
Query: 416 TEYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSA 475
A + SK+ D N K+ ++ S EL LKRL+ T I D+RN+L+RSD SA
Sbjct: 409 RINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLKTTGS-ATEIHDERNILKRSDLSA 467
Query: 476 FSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMD 535
F+RY+T N+G G S S NS E +K S+C ++S+S+ + Q SNG SNN D
Sbjct: 468 FTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNND 527
Query: 536 MGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVL-LDKRDDLVAS 593
MGS+T NA KP+ + K S V H+S+F P + SP V+ DK D+ +A+
Sbjct: 528 MGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQT--SPANVVGKDKVDEGIAN 585
Query: 594 SVLV-HPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNMLGG 652
V V HP Q QH+ + H+ VH M QQ Q S+++ + QCGSSN+
Sbjct: 586 GVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQ-----QQQPSIERGSSDA-QCGSSNVFDP 639
Query: 653 FVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG 712
+EG+A NYS+NGS SG ++G+NGQ G STA N G N+E+ NGI ++G+GG +GSGSG
Sbjct: 640 PIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSG 699
Query: 713 SGNRIDKNKFADREAAVTKYRQKKTERCFRKK 744
SGN + +N REAA+ K+RQK+ R F KK
Sbjct: 700 SGNDLYQNGVCYREAALNKFRQKRKVRNFGKK 731
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 332/692 (47%), Positives = 438/692 (63%), Gaps = 38/692 (5%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q++ Q +V WERFL +++L+VLLVENDDSTR VV+ALLR C YEV A NGL AW+ LE
Sbjct: 62 QKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLE 121
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVD 187
DL NHIDLVLTEV MP LSG+ LLSKI SHK K++PVIMMSS DSMG VFKCLSKGAVD
Sbjct: 122 DLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
Query: 188 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES +TQK K K + NN+GSN+++ +
Sbjct: 182 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNED 241
Query: 248 G----------SIGVNGGDGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQ 297
S+G N DGSD+GSGTQSSWTK+AVE+DSP+ MSP DQ ++ PDSTCAQ
Sbjct: 242 DDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQ 300
Query: 298 VIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESP-- 355
VIH +EI +R +P + + H+E N + L++G R + +EYQ+ SP
Sbjct: 301 VIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS-SPRE 355
Query: 356 IKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKED 415
+ + T+K + + SK + + D S + ++ + L +I + D +
Sbjct: 356 MSVNPTEKQHETLMPQSKTTRETD-------SRNTQNEPTTQTVDLISSIARSTDDKQVV 408
Query: 416 TEYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSA 475
A + SK+ D N K+ ++ S EL LKRL+ T I D+RN+L+RSD SA
Sbjct: 409 RINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLKTTGS-ATEIHDERNILKRSDLSA 467
Query: 476 FSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMD 535
F+RY+T N+G G S S NS E +K S+C ++S+S+ + Q SNG SNN D
Sbjct: 468 FTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNND 527
Query: 536 MGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVL-LDKRDDLVAS 593
MGS+T NA KP+ + K S V H+S+F P + SP V+ DK D+ +A+
Sbjct: 528 MGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQT--SPANVVGKDKVDEGIAN 585
Query: 594 SVLV-HPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNMLGG 652
V V HP Q QH+ + H+ VH M QQ Q S+++ + QCGSSN+
Sbjct: 586 GVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQ-----QQQPSIERGSSDA-QCGSSNVFDP 639
Query: 653 FVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG 712
+EG+A NYS+NGS SG ++G+NGQ G STA N G N+E+ NGI ++G+GG +GSGSG
Sbjct: 640 PIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSG 699
Query: 713 SGNRIDKNKFADREAAVTKYRQKKTERCFRKK 744
SGN + +N REAA+ K+RQK+ R F KK
Sbjct: 700 SGNDLYQNGVCYREAALNKFRQKRKVRNFGKK 731
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 340/697 (48%), Positives = 436/697 (62%), Gaps = 62/697 (8%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q PQ VCWERF+ +++KVLLV++DDSTR VV+ALLR+C YEV A NG QAW LE
Sbjct: 46 QRPPQ---VCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE 102
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVD 187
D+ N IDLVLTEV MP +SG++LLS+IM+H KN+PVIMMSS D+MG VFKCLSKGAVD
Sbjct: 103 DMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
Query: 188 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES QTQK KSK+ + S NN+GSND+D++
Sbjct: 163 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNSGSNDDDDD 222
Query: 248 GSI--GVNGGDGSDDGSGT--QSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNA 303
+ G+N DGSD+GSGT QSSWTK+AVE+DSP+ MSP DQLA+ PDSTCAQVIH +
Sbjct: 223 DGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKS 281
Query: 304 EITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKK 363
+I +R +P T+ K + +E ++F + +DL++G R+L+ YQ+ + + K
Sbjct: 282 DICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN--TAYQSSPNERSI--KP 335
Query: 364 TNRLDLGSSKLSEQIDRGQLDLNSESPSSKLK------YEAAKLAGAITKIIDSDKEDTE 417
T+R R + L + S + ++ AA L G++ K +D+ +
Sbjct: 336 TDR-------------RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARA 382
Query: 418 YEASNKPSKIL---DINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDD-RNVLRRSDS 473
A N SK+ D N +I +PSLELSLKR R D IQ++ RNVLRRSD
Sbjct: 383 TNAPNCSSKVPEGKDKNRDNI-----MPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDL 437
Query: 474 SAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNN 533
SAF+RY+T N+G G + S S N E +K S ++S+S+ P+ Q SNG SNN
Sbjct: 438 SAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNN 497
Query: 534 MDMGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVLLDKRDDLVA 592
DMGSTT N KP+ K + S V H+S+F P ++ SP ++ D VA
Sbjct: 498 NDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVA 555
Query: 593 SSVL--VHPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNML 650
++ P Q L QH H VH +S + PQCGSSN+
Sbjct: 556 NNAAKRAQPGEVQSNLVQHPRPILHYVHF-----------DVSRENGGSGAPQCGSSNVF 604
Query: 651 GGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSG 710
VEG+A NY +NGS SGSN+GSNGQNGS+TAVNA N+E NG KSG GG +GSG
Sbjct: 605 DPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSG 664
Query: 711 SGSGNRIDKNKFADRE---AAVTKYRQKKTERCFRKK 744
SGSGN + +F RE AAV K+RQK+ ER F KK
Sbjct: 665 SGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKK 701
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 341/697 (48%), Positives = 436/697 (62%), Gaps = 62/697 (8%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q PQ VCWERF+ +++KVLLV++DDSTR VV+ALLR+C YEV A NG QAW LE
Sbjct: 46 QRPPQ---VCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE 102
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVD 187
D+ N IDLVLTEV MP +SG++LLS+IM+H KN+PVIMMSS D+MG VFKCLSKGAVD
Sbjct: 103 DMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
Query: 188 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES QTQK KSK+ + S NN GSND+D++
Sbjct: 163 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDD 222
Query: 248 GSI--GVNGGDGSDDGSGT--QSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNA 303
+ G+N DGSD+GSGT QSSWTK+AVE+DSP+ MSP DQLA+ PDSTCAQVIH +
Sbjct: 223 DGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKS 281
Query: 304 EITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKK 363
+I +R +P T+ K + +E ++F + +DL++G R+L+ YQ+ + + K
Sbjct: 282 DICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN--TAYQSSPNERSI--KP 335
Query: 364 TNRLDLGSSKLSEQIDRGQLDLNSESPSSKLK------YEAAKLAGAITKIIDSDKEDTE 417
T+R R + L + S + ++ AA L G++ K +D+ +
Sbjct: 336 TDR-------------RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARA 382
Query: 418 YEASNKPSKIL---DINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDD-RNVLRRSDS 473
A N SK+ D N +I +PSLELSLKR R D IQ++ RNVLRRSD
Sbjct: 383 ANAPNCSSKVPEGKDKNRDNI-----MPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDL 437
Query: 474 SAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNN 533
SAF+RY+T N+G G + S S NS E +K S ++S+S+ P+ Q SNG SNN
Sbjct: 438 SAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNN 497
Query: 534 MDMGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVLLDKRDDLVA 592
DMGSTT N KP+ K + S V H+S+F P ++ SP ++ D VA
Sbjct: 498 NDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVA 555
Query: 593 SSVL--VHPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNML 650
++ P Q L QH H VH +S + PQCGSSN+
Sbjct: 556 NNAAKRAQPGEVQSNLVQHPRPILHYVHF-----------DVSRENGGSGAPQCGSSNVF 604
Query: 651 GGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSG 710
VEG+A NY +NGS SGSN+GSNGQNGS+TAVNA N+E NG KSG GG +GSG
Sbjct: 605 DPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSG 664
Query: 711 SGSGNRIDKNKFADRE---AAVTKYRQKKTERCFRKK 744
SGSGN + +F RE AAV K+RQK+ ER F KK
Sbjct: 665 SGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKK 701
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 207/466 (44%), Positives = 264/466 (56%), Gaps = 86/466 (18%)
Query: 72 PQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLT 131
P +V WER+L +RSLKVLLVENDDSTRH+V ALL+NC YEVT + L+AW+ILED
Sbjct: 48 PLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEK 107
Query: 132 NHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLV 190
+ IDLVLTEV MP SG LLSKIMSHKT KN+PVIMMSS DSM LVFKCLS GAVDFLV
Sbjct: 108 SCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLV 167
Query: 191 KPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSI 250
KPIRKNELKNLWQHVWRRCHSSSGSGSES +KS+K ++ + S N+ +DE N S
Sbjct: 168 KPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNES- 226
Query: 251 GVNGG-----DGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEI 305
G +GG GSD+GSGTQSSWTK+A + S SPS+Q PD+ + + N
Sbjct: 227 GSSGGLSNQDGGSDNGSGTQSSWTKRASDTKS---TSPSNQF---PDAPNKKGTYENG-- 278
Query: 306 TGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKKTN 365
V KE +D +E+ +G + + + E P
Sbjct: 279 ----CAHVNRLKEAEDQKEQ------------IGTGSQTGMSMSKKAEEP---------- 312
Query: 366 RLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKEDTEYEASNKPS 425
G L+ N+ KY L + + +DT N+ S
Sbjct: 313 ---------------GDLEKNA-------KYSVQAL--------ERNNDDT----LNRSS 338
Query: 426 KILDINSKSIKDSKE-LPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSAFSRYNT-AS 483
+ SK+ ++E L SLE +LK+ R +D DR+VLR S+ SAFS+YN A+
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVG---DRSVLRHSNLSAFSKYNNGAT 395
Query: 484 NVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNG 529
+ K P N+ES S + + + GS S S+ +PL Q S+G
Sbjct: 396 SAKKAPEENVESCSPHDSPIAKL-LGS-----SSSSDNPLKQQSSG 435
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 15/76 (19%)
Query: 678 NGSSTAVNAGGMNVES----DNGIAGKSGSGGASGS-----GSGSGNRIDKNKFADREAA 728
NG+++A A NVES D+ IA GS +S + SGS +++A REAA
Sbjct: 392 NGATSAKKAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGS------DRWAQREAA 445
Query: 729 VTKYRQKKTERCFRKK 744
+ K+R K+ ERCF KK
Sbjct: 446 LMKFRLKRKERCFEKK 461
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 5/198 (2%)
Query: 81 RFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE 140
R L ++VLL E DDSTRH++ ALLR CGY V A++G++AW IL++ + +IDLVLTE
Sbjct: 36 RMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 141 V-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELK 199
V +P +SG LLS IM H KN+PVIMMSS DS+ +VFKC+ KGA DFLVKPIRKNEL+
Sbjct: 96 VELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELR 155
Query: 200 NLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSD 259
NLWQHVWR+ SSG TQ + ++ ++ + +G + +N + + S+
Sbjct: 156 NLWQHVWRK-QLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTEN---VVHKNMECSE 211
Query: 260 DGSGTQSSWTKKAVEVDS 277
S QSS T+ +E DS
Sbjct: 212 QESDAQSSCTRSELEADS 229
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 23/83 (27%)
Query: 674 SNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG-------SGNRIDKNK----- 721
+ G++GSST +++ A K+ SG S S S N + +N
Sbjct: 522 TTGESGSSTVLDS-----------ARKTLSGSVCDSSSNHMIAPTESSNVVPENPDGLRH 570
Query: 722 FADREAAVTKYRQKKTERCFRKK 744
+ REAA+ K+R K+ +RCF KK
Sbjct: 571 LSQREAALNKFRLKRKDRCFEKK 593
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 131/203 (64%), Gaps = 13/203 (6%)
Query: 76 MVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHID 135
+V WERFL +L+VLLVE DDSTR ++AALLR C Y V +GL+AW++L+ +D
Sbjct: 38 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVD 97
Query: 136 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIR 194
L+LTEV +P +SG ALL+ IM H KN+PVIMMS+ DS+ V+KC+ KGA D+LVKP+R
Sbjct: 98 LILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLR 157
Query: 195 KNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNG 254
+NEL+NLWQHVWRR S + +S+ + E + N SN + ++ + NG
Sbjct: 158 RNELRNLWQHVWRR----QTSLAPDSFPWNESVGQQKAEGASAN-NSNGKRDDHVVSGNG 212
Query: 255 GDGSDDGSGTQSSWTKKAVEVDS 277
GD QSS T+ +E +S
Sbjct: 213 GDA-------QSSCTRPEMEGES 228
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 76 MVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHID 135
+V WE++L L+VLLVE+D STR ++ ALLR C Y+V ++GL AW++L++ +++ID
Sbjct: 25 VVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNID 84
Query: 136 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIR 194
L+LTE+ +P +SG ALL+ +M H+ KN+PVIMMSS DS+ +V KC+ +GA D+L+KP+R
Sbjct: 85 LILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMR 144
Query: 195 KNELKNLWQHVWRR 208
KNELKNLWQHVWRR
Sbjct: 145 KNELKNLWQHVWRR 158
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 674 SNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSGSGNRIDKNKFADREAAVTKYR 733
SN + +S V AG + ++ GIAG+S S + R +++ REAA+ K+R
Sbjct: 371 SNREKAASKEVEAGSQS--TNEGIAGQSSSTEKPKEEESAKQRWSRSQ---REAALMKFR 425
Query: 734 QKKTERCFRKK 744
K+ +RCF KK
Sbjct: 426 LKRKDRCFDKK 436
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 82 FLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV 141
F+ +++LL ++D S+ V LL NC Y+VT A + Q +L ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 142 -MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKN 200
+P +L I +K +++P+IMMS+ D + +V KCL GA ++LVKP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 201 LWQHVWRR 208
LW HVWRR
Sbjct: 142 LWTHVWRR 149
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Query: 82 FLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV 141
F+ +++LL +ND ++ V LL C Y+VT + Q L ID++L E+
Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEI 72
Query: 142 -MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKN 200
+P G+ +L I K + +PVIMMS D + +V KCL GA D+LVKP+R NEL N
Sbjct: 73 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 132
Query: 201 LWQHVWRR 208
LW H+WRR
Sbjct: 133 LWTHMWRR 140
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 707 SGSGSGSGNRIDKNKFADREAAVTKYRQKKTERCFRKK 744
S +G+ N + NK RE A+ K+R+K+ +RCF KK
Sbjct: 515 SPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKK 552
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 85/145 (58%), Gaps = 10/145 (6%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +LR C YEVT+ A +L + D+V+++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 207 RRCHSS------SGSGSESCTQTQK 225
R+ S SGS E+ + Q+
Sbjct: 154 RKRRSEWSVPEHSGSIEETGERQQQ 178
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +L C Y VT+ A +L N D+V+++V MP +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 207 RRCH-----SSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDN 246
R+ S GS T + + ++ E++ NN+ S +E N
Sbjct: 145 RKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGN 189
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 25/170 (14%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V++D + ++ +LLR+C Y VT +A ++L + N DLV+++V MP +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV- 132
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGD 256
++S+ +N G+N + D +G+ GV D
Sbjct: 133 --------------------VRSRFDKNRGSNNNGDKRDGSGNEGVGNSD 162
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V++D + ++ LL+ C Y VT A ++L + N DLV+++V MP +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIM+S+ V K + GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 207 RRCHSSS-----GSGSESCTQTQKSIKSKNVENSGNNTGSNDED 245
R+ +GS +C + + K + E G++++D
Sbjct: 134 RKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDD 177
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L++L+V++D S ++ +L Y+VT + A IL + + DLVL++V MP ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL ++ +LPVIMMS V ++ GA D+L+KPIR ELKN+WQHV
Sbjct: 71 GYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVV 128
Query: 207 RR 208
RR
Sbjct: 129 RR 130
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +L+ C YEVT +A ++L + + D+V+++V MP +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIMMS V K + GA D+L+KPIR ELK +WQHV
Sbjct: 71 GFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 207 RR 208
R+
Sbjct: 128 RK 129
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE-VMPCLS 146
L+VL++++D S V+ LL C Y+VT N +A + D +DLV+++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ +L ++ S + +P ++M+S V K ++ GA DFL+KP+R EL N+WQH++
Sbjct: 71 GLLILQEVTS---KFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 207 RR 208
R+
Sbjct: 128 RK 129
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 4/122 (3%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE-VMPCLS 146
L+VL++++D S V+ LL C Y+VT N +A + D +DLV+++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ +L ++ S + +P ++M+S V K ++ GA DFL+KP+R EL N+WQH++
Sbjct: 71 GLLILQEVTS---KFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 207 RR 208
R+
Sbjct: 128 RK 129
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
+++L+ ++DD R ++ LL+ Y VT NG AW+ + DLVLT+V MP ++
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 147 GVALLSKIMSHKTRKNLPVIMMS-SLDSMGLVFKCLSKGAVDFLVKPIRKNELK----NL 201
G LL +I H +++PVI+MS + + G DFL KPI K LK +
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTV 279
Query: 202 WQHVWRR 208
Q +W+R
Sbjct: 280 LQSIWQR 286
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 11/182 (6%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V+++ + + LL C Y VT+ +A ++L + +N DLV+++V MP
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G LL + +LPVIM+S+ V K + GA D+LVKP+ EL+N+W HV
Sbjct: 78 GFKLLEIGL----EMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 207 R---RCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSDDGSG 263
+ + ++ SES + S K K + N++G D+ + G + DGSG
Sbjct: 134 KKNIKSYAKLLPPSESDSVPSASRKRK---DKVNDSGDEDDSDREEDDGEGSEQDGDGSG 190
Query: 264 TQ 265
T+
Sbjct: 191 TR 192
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 80 ERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLT 139
E FL +S +VLLV D ++ + L+ Y+VT+ +G +A L + IDLV+
Sbjct: 34 EEFL-TKSNRVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90
Query: 140 EV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 198
+ MP ++G+ L+ I + +LPV++MS V + + GA DFLVKP+ K +
Sbjct: 91 DFHMPDINGLDALNII---GKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVI 147
Query: 199 KNLWQHVWRRCHSSSG 214
LW+HV+R+ S SG
Sbjct: 148 AVLWRHVYRKRMSKSG 163
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGV 148
VL+V+ + +T + +++ Y+V+ T+ +A L + I++V+ + MP + G+
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 149 ALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 208
L I S + +LPV++MS + V K GA D++VKP+++ + N+WQH+ R+
Sbjct: 96 QALKSITS---KLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 209 CHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDG 257
+ + S + V++ T D D+ SI +NGG+G
Sbjct: 153 RLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITINGGNG 201
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 16/145 (11%)
Query: 83 LHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDL------------ 130
L L + VL V++ R V+ LLR +VT +G W+ LE L
Sbjct: 29 LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSG---WRALEFLGLDNEKASAEFD 85
Query: 131 TNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFL 189
+DL++T+ MP ++G LL KI + +PV++MSS + + + +CL +GA DFL
Sbjct: 86 RLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFL 145
Query: 190 VKPIRKNELKNLWQHVWRRCHSSSG 214
+KP++ ++K L H+ + S+G
Sbjct: 146 LKPVKLADVKRLRSHLTKDVKLSNG 170
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 14/132 (10%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL-----------EDLTNHIDL 136
L VL V++ R V+ LLR +VT +G +A + L +DL ++L
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDL--KVNL 81
Query: 137 VLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRK 195
++T+ MP LSG LL KI + +PV++MSS + + + +CL +GA +FL+KP++
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 196 NELKNLWQHVWR 207
++K + Q + R
Sbjct: 142 ADVKRIKQLIMR 153
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 16/123 (13%)
Query: 80 ERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLT 139
ER L + S KV +V D +TR L+ G +V E + G EDL ++L++T
Sbjct: 41 ERLLRVSSCKVTVV--DSATR-----ALQYLGLDVEEKSVGF------EDLK--VNLIMT 85
Query: 140 EV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 198
+ MP ++G LL KI + +PV++MSS + + + +CL +GA DFL+KP++ +++
Sbjct: 86 DYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDV 145
Query: 199 KNL 201
K L
Sbjct: 146 KRL 148
>sp|Q06065|ATOC_ECOLI Acetoacetate metabolism regulatory protein AtoC OS=Escherichia coli
(strain K12) GN=atoC PE=3 SV=2
Length = 461
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 89 KVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSG 147
++L+V+++D+ R +++ G+E A NG A + D+ H D+VL ++ MP + G
Sbjct: 6 RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADI--HPDVVLMDIRMPEMDG 63
Query: 148 VALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQ 203
+ L ++ SH+TR PVI+M++ + + L GA D+++KP +EL + Q
Sbjct: 64 IKALKEMRSHETRT--PVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQ 117
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL---------EDLTNHIDLVL 138
+ VL V++ R V+ LLR +VT +G +A + L E +DL++
Sbjct: 33 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLII 92
Query: 139 TE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNE 197
T+ MP ++G LL KI + K +PV++MSS + M + +CL +GA DFL+KP++ +
Sbjct: 93 TDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLAD 152
Query: 198 LKNLWQHVWR 207
+K L ++ R
Sbjct: 153 VKRLRSYLTR 162
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAW-KILEDLTNHIDLVLTEV-MPCLSG 147
+L+V++D S ++ ALLR GY V A NGLQA K+ E + DLVL ++ M + G
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKV---FDLVLCDIRMAEMDG 64
Query: 148 VALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELK 199
+ L +I + ++PV++M++ S+ + L GA+D+L+KP+ ++L+
Sbjct: 65 IETLKEIKTFN--PSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVM-PCLSGV 148
+L+V+++++ R ++ L GY V+ A NG +A KI T+ IDL++ +VM P L G
Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFT--THSIDLIILDVMMPKLDGY 71
Query: 149 ALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 208
+ +I + ++P+IM+++L+ + L GA D+++KP EL+ Q + RR
Sbjct: 72 GVCQEI---RKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
Query: 209 CHSSSG 214
+ +
Sbjct: 129 IQTRNA 134
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL-----------EDLTNHIDL 136
L VL V++ R V+ LL+ +VT +G +A + L +DL ++L
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDL--KVNL 75
Query: 137 VLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRK 195
++T+ MP L+G LL KI + +PV++MSS + + +C+ +GA +FL+KP++
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKL 135
Query: 196 NELKNLWQHVWRRCHSSSG 214
++K L + + R + G
Sbjct: 136 ADVKRLKELIMRGGEAEEG 154
>sp|P71403|CHEY_HELPY Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=cheY PE=1 SV=2
Length = 124
Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYE-VTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
+K+L+V++ + R ++ L GYE V EA +G++AW+ L+ + L+ MP ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMN 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELK 199
G+ L+ K+ S K +P+IM+++ V L G +++VKP LK
Sbjct: 61 GLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>sp|Q7A0U4|SRRA_STAAW Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MW2) GN=srrA PE=3 SV=1
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q9L524|SRRA_STAAU Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
GN=srrA PE=2 SV=2
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q6G972|SRRA_STAAS Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MSSA476) GN=srrA PE=3 SV=2
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q6GGK6|SRRA_STAAR Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MRSA252) GN=srrA PE=3 SV=2
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q7A5H6|SRRA_STAAN Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain N315) GN=srrA PE=1 SV=1
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q7A2R6|SRRA_STAAM Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=srrA PE=1 SV=1
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q5HFT0|SRRA_STAAC Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain COL) GN=srrA PE=2 SV=1
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q2FY79|SRRA_STAA8 Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain NCTC 8325) GN=srrA PE=3 SV=1
Length = 241
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 206
G+ + +K+ H K P+IM+++ + GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 207 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 247
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q9ZM64|CHEY_HELPJ Chemotaxis protein CheY homolog OS=Helicobacter pylori (strain J99)
GN=cheY PE=3 SV=1
Length = 124
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYE-VTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
+K+L+V++ + R ++ L GYE V EA +G++AW+ L+ + L+ MP ++
Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMN 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELK 199
G+ L+ K+ + K +P+IM+++ V L G +++VKP LK
Sbjct: 61 GLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 79 WERFLHLRSLKVLLVEN------DDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTN 132
WE F + LKVLL+ N D S+ + L + Y VT T+ +A +
Sbjct: 11 WENFP--KGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPE 68
Query: 133 HIDLVLTEVMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKP 192
+ + EV +S + K + + LP IM+S+ + KC++ GAV+FL KP
Sbjct: 69 SFHIAIVEV--NMSAESESFKFLE-AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKP 125
Query: 193 IRKNELKNLWQHVWRRCHSSSGS 215
+ +LKN+WQHV + + GS
Sbjct: 126 LSPEKLKNIWQHVVHKAFNDGGS 148
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHI-DLVLTEV-MPCL 145
+ +L+V++D S ++ ALLR GY V A +G QA LE + + DLVL +V M +
Sbjct: 6 IDILVVDDDISHCTILQALLRGWGYNVALANSGRQA---LEQVREQVFDLVLCDVRMAEM 62
Query: 146 SGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 205
G+A L +I + +PV++M++ S+ + L GA+D+L+KP+ + L+ +
Sbjct: 63 DGIATLKEIKA--LNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKA 120
Query: 206 WRRCHS 211
HS
Sbjct: 121 LAHTHS 126
>sp|Q9FPR6|ARR17_ARATH Two-component response regulator ARR17 OS=Arabidopsis thaliana
GN=ARR17 PE=2 SV=1
Length = 153
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL--------EDLTN--HIDLV 137
L VL V+++ R +V +L+ +VT A NGL+A + L + LTN ++L+
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 138 LTE-VMPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKN 196
+T+ MP ++G LL K+ K +PV+++SS + + KCL+ GA F+ KP++ +
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139
Query: 197 ELKNLWQHVW 206
+++ L H+
Sbjct: 140 DVEKLKCHLL 149
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 15/127 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVT---EATNGLQAWKI---------LEDLTNHID 135
L VL V++ R + LLR +VT AT LQ + EDL I+
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLK--IN 82
Query: 136 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIR 194
L++T+ MP ++G LL KI + +PV++MSS + + + +CL +GA DFL+KP++
Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142
Query: 195 KNELKNL 201
++K L
Sbjct: 143 LADVKRL 149
>sp|P48259|YCF27_CYAPA Probable transcriptional regulator ycf27 OS=Cyanophora paradoxa
GN=ycf27 PE=3 SV=1
Length = 239
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 83 LHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV- 141
+ + K+L+V+++ S R ++ L GYEV A +G +A I + H +LV+ +V
Sbjct: 1 MEINKKKILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQ--LEHPNLVVLDVM 58
Query: 142 MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNL 201
MP L G + ++ + ++P+IM+++L + L GA D++VKP EL+
Sbjct: 59 MPKLDGYGVCQEL---RKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEAR 115
Query: 202 WQHVWRRCHSSSGSGSES 219
+ + RR + + S + +
Sbjct: 116 IRSLLRRTENPTLSTTST 133
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL---------------EDLTNH- 133
VL V++ R ++ LL+ +VT +G +A + L + NH
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 134 ---IDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFL 189
++L++T+ MP ++G LL K+ +++PV++MSS + + +CL +GA +F
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130
Query: 190 VKPIRKNELKNLWQHVWR 207
+KP+R +L L H+ +
Sbjct: 131 LKPVRLADLNKLKPHMMK 148
>sp|P0A4H5|CHEY_LISMO Chemotaxis protein CheY OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=cheY PE=3 SV=1
Length = 119
Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVT-EATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
LK+L+V++ R ++ ++++ +EV EA NGL+A K +++ I + L MP +
Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDI-VTLDITMPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 198
G+ L++IM+ VIM S++ G+V + KGA DF+VKP + + +
Sbjct: 61 GLEALAQIMAKDPSAK--VIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>sp|P0A4H6|CHEY_LISIN Chemotaxis protein CheY OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=cheY PE=3 SV=1
Length = 119
Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVT-EATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
LK+L+V++ R ++ ++++ +EV EA NGL+A K +++ I + L MP +
Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKPDI-VTLDITMPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 198
G+ L++IM+ VIM S++ G+V + KGA DF+VKP + + +
Sbjct: 61 GLEALAQIMAKDPSAK--VIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>sp|P10577|NTRC_RHIME Nitrogen assimilation regulatory protein OS=Rhizobium meliloti
(strain 1021) GN=ntrC PE=1 SV=2
Length = 484
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGV 148
+L+ ++D + R V+ L GY+V +N W+ + DLV+T+V MP +
Sbjct: 6 ILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIA--AGDGDLVVTDVVMPDENAF 63
Query: 149 ALLSKIMSHKTRKNLPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNEL 198
LL +I K R +LPV++MS+ ++ K KGA D+L KP EL
Sbjct: 64 DLLPRI--KKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTEL 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 278,344,687
Number of Sequences: 539616
Number of extensions: 12344831
Number of successful extensions: 100646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 1016
Number of HSP's that attempted gapping in prelim test: 67344
Number of HSP's gapped (non-prelim): 25891
length of query: 746
length of database: 191,569,459
effective HSP length: 125
effective length of query: 621
effective length of database: 124,117,459
effective search space: 77076942039
effective search space used: 77076942039
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)