BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004543
(745 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/531 (39%), Positives = 316/531 (59%), Gaps = 23/531 (4%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+LA +L LGNV F D+++ P + L L+G D E+ L RK+ +T
Sbjct: 328 ILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETY 387
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
++ ++ A + RDALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+
Sbjct: 388 IKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEI 446
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGL 180
NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+
Sbjct: 447 NSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGV 505
Query: 181 LSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFL 237
L LLDEE P G+D T+A KL HLN F R +K+F + H+A +V Y GFL
Sbjct: 506 LDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFL 565
Query: 238 EKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKA 282
EKN+D ++ + I++L S LP++F S + S PV +
Sbjct: 566 EKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARP 625
Query: 283 G-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR C
Sbjct: 626 GQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRAC 685
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVG 401
GVLE +RIS +GFP+R ++Q+F RY L+ + D +L + + + YQ G
Sbjct: 686 GVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFG 745
Query: 402 YTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEK 460
TK+FFRAGQ+ LE R L +R+Q RG R +RR + +Q ++RG +
Sbjct: 746 KTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQ 805
Query: 461 IRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKYSSIMIQSVIRGWLVR 511
R YA L+R RAA++IQ+ + V R++ + ++ ++I +Q+++RG+LVR
Sbjct: 806 ARC-YATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVR 855
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/468 (40%), Positives = 273/468 (58%), Gaps = 22/468 (4%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+LA +L LGNV F D+++ P + L L+G D E+ L RK+ +T
Sbjct: 328 ILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETY 387
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
++ ++ A + RDALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+
Sbjct: 388 IKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEI 446
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGL 180
NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+
Sbjct: 447 NSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGV 505
Query: 181 LSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFL 237
L LLDEE P G+D T+A KL HLN F R +K+F + H+A +V Y GFL
Sbjct: 506 LDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFL 565
Query: 238 EKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKA 282
EKN+D ++ + I++L S LP++F S + S PV +
Sbjct: 566 EKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARP 625
Query: 283 G-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR C
Sbjct: 626 GQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRAC 685
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVG 401
GVLE +RIS +GFP+R ++Q+F RY L+ + D +L + + + YQ G
Sbjct: 686 GVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFG 745
Query: 402 YTKLFFRAGQIGMLEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRG 448
TK+FFRAGQ+ LE R L +R+Q RG R +RRG
Sbjct: 746 KTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRG 793
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 182/438 (41%), Positives = 261/438 (59%), Gaps = 21/438 (4%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+LA +L LGNV F D+++ P + L L+G D E+ L RK+ +T
Sbjct: 328 ILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETY 387
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
++ ++ A + RDALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+
Sbjct: 388 IKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEI 446
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGL 180
NSFEQFCINYANE+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+
Sbjct: 447 NSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGV 505
Query: 181 LSLLDEESTFPNGTDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFL 237
L LLDEE P G+D T+A KL HLN F R +K+F + H+A +V Y GFL
Sbjct: 506 LDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFL 565
Query: 238 EKNRDLLHLDSIELLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKA 282
EKN+D ++ + I++L S LP++F S + S PV +
Sbjct: 566 EKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARP 625
Query: 283 G-GADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
G + K +V +F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR C
Sbjct: 626 GQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRAC 685
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVG 401
GVLE +RIS +GFP+R ++Q+F RY L+ + D +L + + + YQ G
Sbjct: 686 GVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFG 745
Query: 402 YTKLFFRAGQIGMLEDTR 419
TK+FFRAGQ+ LE R
Sbjct: 746 KTKIFFRAGQVAYLEKIR 763
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/428 (41%), Positives = 260/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/480 (39%), Positives = 278/480 (57%), Gaps = 37/480 (7%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTRNRTLHGILRVQSCF-----------RGHQARLCLKELRRGIVALQSFIRGEK 460
+ +E+ R + L G + +S + QA L ++ I ++QSF+ K
Sbjct: 751 LARIEEAREQRL-GSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 809
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 260/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/435 (41%), Positives = 262/435 (60%), Gaps = 25/435 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 412 IGMLEDTRNRTLHGI 426
+ +E+ R + + I
Sbjct: 762 LARIEEAREQRISEI 776
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 261/432 (60%), Gaps = 25/432 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 412 IGMLEDTRNRTL 423
+ +E+ R + L
Sbjct: 750 LARIEEAREQRL 761
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 179/435 (41%), Positives = 262/435 (60%), Gaps = 25/435 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 412 IGMLEDTRNRTLHGI 426
+ +E+ R + + I
Sbjct: 762 LARIEEAREQRISEI 776
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 261/432 (60%), Gaps = 25/432 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 412 IGMLEDTRNRTL 423
+ +E+ R + L
Sbjct: 762 LARIEEAREQRL 773
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 261/432 (60%), Gaps = 25/432 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 358 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 415
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 416 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 473
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 474 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 534 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 593
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 594 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 642
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 643 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 702
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 703 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 761
Query: 412 IGMLEDTRNRTL 423
+ +E+ R + L
Sbjct: 762 LARIEEAREQRL 773
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIEGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 260/432 (60%), Gaps = 25/432 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV +IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 412 IGMLEDTRNRTL 423
+ +E+ R + L
Sbjct: 750 LARIEEAREQRL 761
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 258/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERAAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--EERKAYFIGVLDIEGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 258/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC VLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRKG 690
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 750 LARIEEAR 757
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 258/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC VLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRKG 690
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY +LL +V ++D + A+L NI PE Y+ G TK+FFRAGQ
Sbjct: 691 FPNRIIYADFVKRY-YLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQ 749
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 750 LARIEEAR 757
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 257/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + L+VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/441 (41%), Positives = 258/441 (58%), Gaps = 24/441 (5%)
Query: 33 VAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQI 92
VA L+G + G+L L K++VG + + Q Q T++ ALAKS+Y +F WLV ++
Sbjct: 386 VAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRV 445
Query: 93 NKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYI 152
N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ FN H+F LEQEEY
Sbjct: 446 NQTLDTKAKRQ-FFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYK 504
Query: 153 QDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKL-KQHLNSNP 210
++GI W +DF D + C+ L EK P+G+LS+L+EE FP +D +F NKL HL NP
Sbjct: 505 KEGIVWEFIDFGLDLQACIELIEK-PMGILSILEEECMFPKASDTSFKNKLYDNHLGKNP 563
Query: 211 CF-------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIF 263
F G + F + HYAG V Y G+L+KN+D ++ + +ELL + + +
Sbjct: 564 MFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIVK-- 621
Query: 264 ASNMLSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNN 322
ML + ++ P K S ++++ K L +LM+ L ST PHF+RCI PN
Sbjct: 622 ---MLFTPPR-ILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNE 677
Query: 323 FQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDP 380
++PGL + LVL QLRC GVLE +RI R GFP R+ + +F +RY L +V S D
Sbjct: 678 LKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADG 737
Query: 381 LSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRV-QSCFRGHQAR 439
V+ L + P Y++G TK+FF+AG +GMLED R+ L I+ + Q+ RG+ R
Sbjct: 738 KVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMR 797
Query: 440 LCLKEL---RRGIVALQSFIR 457
K+L R G+ +Q +R
Sbjct: 798 KAYKKLQDQRIGLTLIQRNVR 818
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 348 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 407
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
++Q ++ ALAKS+Y +F WLV ++NK+L +R I +LDI GFE FD NS
Sbjct: 408 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNS 466
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 467 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGIL 525
Query: 182 SLLDEESTFPNGTDLTFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F +KL Q H+ N P + F + HYAG V Y
Sbjct: 526 SILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYS 585
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-- 290
TG+LEKN+D ++ + + LL + S +P+V L+KA +
Sbjct: 586 ITGWLEKNKDPINENVVALLGA----------------SKEPLVAELFKAPEEPAGGGKK 629
Query: 291 ---------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+++ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C
Sbjct: 630 KKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCN 689
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP+R+ + +F +RY L ++ D +VS IL + P Y+
Sbjct: 690 GVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR 749
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G TK+FF+AG +G LE+ R+ L I+ S F+ H IRG
Sbjct: 750 LGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-------------------IRGY 787
Query: 460 KIRKEYALVLQRHRAAVVIQRQIK 483
IRK Y + + VIQR I+
Sbjct: 788 LIRKAYKKLQDQRIGLSVIQRNIR 811
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 353 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 412
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
++Q ++ ALAKS+Y +F WLV ++NK+L +R I +LDI GFE FD NS
Sbjct: 413 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNS 471
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 472 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGIL 530
Query: 182 SLLDEESTFPNGTDLTFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F +KL Q H+ N P + F + HYAG V Y
Sbjct: 531 SILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYS 590
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-- 290
TG+LEKN+D ++ + + LL + S +P+V L+KA +
Sbjct: 591 ITGWLEKNKDPINENVVALLGA----------------SKEPLVAELFKAPEEPAGGGKK 634
Query: 291 ---------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+++ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C
Sbjct: 635 KKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCN 694
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP+R+ + +F +RY L ++ D +VS IL + P Y+
Sbjct: 695 GVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR 754
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G TK+FF+AG +G LE+ R+ L I+ S F+ H IRG
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-------------------IRGY 792
Query: 460 KIRKEYALVLQRHRAAVVIQRQIK 483
IRK Y + + VIQR I+
Sbjct: 793 LIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 349 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 408
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
++Q ++ ALAKS+Y +F WLV ++NK+L +R I +LDI GFE FD NS
Sbjct: 409 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNS 467
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 468 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGIL 526
Query: 182 SLLDEESTFPNGTDLTFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F +KL Q H+ N P + F + HYAG V Y
Sbjct: 527 SILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYS 586
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-- 290
TG+LEKN+D ++ + + LL + S +P+V L+KA +
Sbjct: 587 ITGWLEKNKDPINENVVALLGA----------------SKEPLVAELFKAPEEPAGGGKK 630
Query: 291 ---------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+++ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C
Sbjct: 631 KKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCN 690
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP+R+ + +F +RY L ++ D +VS IL + P Y+
Sbjct: 691 GVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR 750
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G TK+FF+AG +G LE+ R+ L I+ S F+ H IRG
Sbjct: 751 LGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-------------------IRGY 788
Query: 460 KIRKEYALVLQRHRAAVVIQRQIK 483
IRK Y + + VIQR I+
Sbjct: 789 LIRKAYKKLQDQRIGLSVIQRNIR 812
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 353 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 412
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
++Q ++ ALAKS+Y +F WLV ++NK+L +R I +LDI GFE FD NS
Sbjct: 413 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNS 471
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 472 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGIL 530
Query: 182 SLLDEESTFPNGTDLTFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F +KL Q H+ N P + F + HYAG V Y
Sbjct: 531 SILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYS 590
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-- 290
TG+LEKN+D ++ + + LL + S +P+V L+KA +
Sbjct: 591 ITGWLEKNKDPINENVVALLGA----------------SKEPLVAELFKAPEEPAGGGKK 634
Query: 291 ---------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+++ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C
Sbjct: 635 KKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCN 694
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP+R+ + +F +RY L ++ D +VS IL + P Y+
Sbjct: 695 GVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR 754
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G TK+FF+AG +G LE+ R+ L I+ S F+ H IRG
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-------------------IRGY 792
Query: 460 KIRKEYALVLQRHRAAVVIQRQIK 483
IRK Y + + VIQR I+
Sbjct: 793 LIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 269/504 (53%), Gaps = 63/504 (12%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 353 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 412
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
++Q ++ ALAKS+Y +F WLV ++NK+L +R I +LDI GFE FD NS
Sbjct: 413 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNS 471
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 472 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGIL 530
Query: 182 SLLDEESTFPNGTDLTFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F +KL Q H+ N P + F + HYAG V Y
Sbjct: 531 SILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYS 590
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-- 290
TG+LEKN+D ++ + + LL + S +P+V L+KA +
Sbjct: 591 ITGWLEKNKDPINENVVALLGA----------------SKEPLVAELFKAPEEPAGGGKK 634
Query: 291 ---------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+++ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C
Sbjct: 635 KKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCN 694
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP+R+ + +F +RY L ++ D +VS IL + P Y+
Sbjct: 695 GVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR 754
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G TK+FF+AG +G LE+ R+ L I+ S F+ H IRG
Sbjct: 755 LGTTKVFFKAGVLGNLEEMRDERLSKII---SMFQAH-------------------IRGY 792
Query: 460 KIRKEYALVLQRHRAAVVIQRQIK 483
IRK Y + + VIQR I+
Sbjct: 793 LIRKAYKKLQDQRIGLSVIQRNIR 816
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 257/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 257/428 (60%), Gaps = 25/428 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 347 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 404
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L R I +LDI GFE F
Sbjct: 405 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFK 462
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FK+EQE+Y+++ I+W +DF D++ ++L + ++P
Sbjct: 463 VNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQATIDLIDGRQP 522
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 523 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 582
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + L+VA
Sbjct: 583 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVA 631
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 632 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 691
Query: 354 FPTRMSHQKFARRYGFLLLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQ 411
FP R+ + F +RY + L +V ++D + A+L NI PE ++ G TK+FFRAGQ
Sbjct: 692 FPNRIIYADFVKRY-YDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQ 750
Query: 412 IGMLEDTR 419
+ +E+ R
Sbjct: 751 LARIEEAR 758
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 263/473 (55%), Gaps = 21/473 (4%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+ AV+ GN+ F E EP E A L+G + EL AL +++VGN+ +
Sbjct: 351 LTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAELLKALCYPRVKVGNEFV 410
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T+SQ ++ ALAK++Y +F W+V +IN+ L + R I +LDI GFE FD
Sbjct: 411 TKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDF 469
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEKKPLG 179
NSFEQ CIN+ NE+LQQ FN H+F LEQEEY ++GI+W +DF D C+ L E KP+G
Sbjct: 470 NSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIE-KPMG 528
Query: 180 LLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYD 232
+ S+L+EE FP TD +F NKL QHL + F +G+ + F++ HYAG V Y+
Sbjct: 529 IFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYN 588
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLS 291
+G+LEKN+D L+ I L S L +FA+ S +
Sbjct: 589 ISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEGGGGKK---GGKKKGSSFQT 645
Query: 292 VATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISR 351
V+ F+ L +LM L ST PHF+RCI PN ++PG E LVL QLRC GVLE +RI R
Sbjct: 646 VSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 705
Query: 352 SGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFR 408
GFP+R+ + F +RY L ++ D S +L ++ Y+ G+TK+FF+
Sbjct: 706 KGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGSIDVDHTQYRFGHTKVFFK 765
Query: 409 AGQIGMLEDTRNRTLHGIL-RVQSCFRGHQARLCLK---ELRRGIVALQSFIR 457
AG +G+LE+ R+ L I+ R Q+ RG R+ + E R I +Q +R
Sbjct: 766 AGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVEYRRMVERRESIFCIQYNVR 818
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 265/493 (53%), Gaps = 40/493 (8%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 355 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 414
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
L Q ++ AL+KS+Y +F WLV+++N++L +R I +LDI GFE FD NS
Sbjct: 415 GQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNS 473
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 474 FEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQMCIDLIEK-PMGIL 532
Query: 182 SLLDEESTFPNGTDLTFAN-KLKQHLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F + + H+ N P + F + HYAG V Y
Sbjct: 533 SILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYS 592
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSV 292
G+L+KN+D ++ + + LL+ + + + ++P G K S ++
Sbjct: 593 IAGWLDKNKDPINENVVSLLAVSK----EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTI 648
Query: 293 ATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRS 352
+ + L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R
Sbjct: 649 SAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRK 708
Query: 353 GFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAG 410
GFP+R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG
Sbjct: 709 GFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAG 768
Query: 411 QIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQ 470
+G LE+ R+ L I+ S F+ H IRG IRK Y +
Sbjct: 769 VLGNLEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQD 806
Query: 471 RHRAAVVIQRQIK 483
+ VIQR I+
Sbjct: 807 QRIGLSVIQRNIR 819
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 179/493 (36%), Positives = 263/493 (53%), Gaps = 40/493 (8%)
Query: 3 AAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQ 62
A++L +G + F E E VA L G + G+L AL K++VG + + +
Sbjct: 354 ASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 413
Query: 63 NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNS 122
L Q ++ AL+KS+Y +F WLV+++N++L +R I +LDI GFE FD NS
Sbjct: 414 GQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNS 472
Query: 123 FEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEKKPLGLL 181
FEQ CINY NERLQQ FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+L
Sbjct: 473 FEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQMCIDLIEK-PMGIL 531
Query: 182 SLLDEESTFPNGTDLTFAN-KLKQHLNSN--------PCFRGERDKSFTVSHYAGEVIYD 232
S+L+EE FP D +F + + H+ N P + F + HYAG V Y
Sbjct: 532 SILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYS 591
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSV 292
G+L+KN+D ++ + + LL+ + + + ++P G K S ++
Sbjct: 592 IAGWLDKNKDPINENVVSLLAVSK----EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTI 647
Query: 293 ATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRS 352
+ + L +LM L T PHF+RCI PN + PGL + LVL QL+C GVLE +RI R
Sbjct: 648 SAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAELVLHQLQCNGVLEGIRICRK 707
Query: 353 GFPTRMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAG 410
GFP+R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG
Sbjct: 708 GFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAG 767
Query: 411 QIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQ 470
+G LE+ R+ L I+ S F+ H IRG IRK Y +
Sbjct: 768 VLGNLEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQD 805
Query: 471 RHRAAVVIQRQIK 483
+ VIQR I+
Sbjct: 806 QRIGLSVIQRNIR 818
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 248/434 (57%), Gaps = 15/434 (3%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+ A++ GN+ F + E EP E A L+G + +L L +++VGN+ +
Sbjct: 352 LTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYV 411
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ + Q ALAK++Y +F W+V +IN +L + R I +LDI GFE FD
Sbjct: 412 TKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQPRQ-YFIGVLDIAGFEIFDF 470
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLG 179
NSFEQ CIN+ NE+LQQ FN H+F LEQEEY ++GI+W +DF D + C++L E KP+G
Sbjct: 471 NSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIE-KPMG 529
Query: 180 LLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYD 232
++S+L+EE FP TD+TF KL HL + F +G+ + F++ HYAG V Y+
Sbjct: 530 IMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYN 589
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSV 292
G+L+KN+D L+ + L S L +N + ++ P+ KA S + +V
Sbjct: 590 IIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFAN-YAGADAPIEKGKGKAKKGSSFQ-TV 647
Query: 293 ATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRS 352
+ + L +LM L ST PHF+RCI PN +SPG+ + LV+ QLRC GVLE +RI R
Sbjct: 648 SALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRK 707
Query: 353 GFPTRMSHQKFARRYGFLLLESVASQ---DPLSVSVAILHQFNILPEMYQVGYTKLFFRA 409
GFP R+ + F +RY L ++ D + +L +I Y+ G+TK+FF+A
Sbjct: 708 GFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKA 767
Query: 410 GQIGMLEDTRNRTL 423
G +G+LE+ R+ L
Sbjct: 768 GLLGLLEEMRDERL 781
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 253/496 (51%), Gaps = 39/496 (7%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+ AV+ GN+ F E EP E A L+G + EL AL ++ VGN+ +
Sbjct: 351 LTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGVGNEAV 410
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
T+S+ ++ ALA ++Y +F W+V +IN+ L + R I +LDI GFE FD
Sbjct: 411 TXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDF 469
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEKKPLG 179
NSFEQ CIN+ NE LQQ FN H+F LEQEEY +GI+W +DF D C+ L E P+G
Sbjct: 470 NSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMG 528
Query: 180 LLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYD 232
+ S+L+EE FP TD +F N L +HL + F +G+ + F++ HYAG V Y+
Sbjct: 529 IFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYN 588
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLS 291
+G+LE N D L+ I L S L +FA+ S +
Sbjct: 589 ISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKK---GGKKKGSSFQT 645
Query: 292 VATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISR 351
V+ F+ L LM L ST PHF+RCI PN +PG E LVL QLRC GVLE +RI R
Sbjct: 646 VSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICR 705
Query: 352 SGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFR 408
GFP+R+ + F +RY L ++ D S +L ++ Y G+T +FF
Sbjct: 706 KGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFX 765
Query: 409 AGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALV 468
AG +G+LE+ R+ L I I A Q+ RG +R EY +
Sbjct: 766 AGLLGLLEEMRDDXLAEI----------------------ITATQARCRGFLMRVEYRAM 803
Query: 469 LQRHRAAVVIQRQIKS 484
++R + IQ ++S
Sbjct: 804 VERRESIFCIQYNVRS 819
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 253/496 (51%), Gaps = 39/496 (7%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
+ AV+ GN+ F E EP E A L+G + EL AL ++ VGN+ +
Sbjct: 354 LTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGVGNEAV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
T+S+ ++ ALA ++Y +F W+V +IN+ L + R I +LDI GFE FD
Sbjct: 414 TXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDF 472
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEKKPLG 179
NSFEQ CIN+ NE LQQ FN H+F LEQEEY +GI+W +DF D C+ L E P+G
Sbjct: 473 NSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMG 531
Query: 180 LLSLLDEESTFPNGTDLTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYD 232
+ S+L+EE FP TD +F N L +HL + F +G+ + F++ HYAG V Y+
Sbjct: 532 IFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYN 591
Query: 233 TTGFLEKNRDLLHLDSIELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLS 291
+G+LE N D L+ I L S L +FA+ S +
Sbjct: 592 ISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKK---GGKKKGSSFQT 648
Query: 292 VATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISR 351
V+ F+ L LM L ST PHF+RCI PN +PG E LVL QLRC GVLE +RI R
Sbjct: 649 VSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICR 708
Query: 352 SGFPTRMSHQKFARRYGFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFR 408
GFP+R+ + F +RY L ++ D S +L ++ Y G+T +FF
Sbjct: 709 KGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFX 768
Query: 409 AGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALV 468
AG +G+LE+ R+ L I I A Q+ RG +R EY +
Sbjct: 769 AGLLGLLEEMRDDXLAEI----------------------ITATQARCRGFLMRVEYRAM 806
Query: 469 LQRHRAAVVIQRQIKS 484
++R + IQ ++S
Sbjct: 807 VERRESIFCIQYNVRS 822
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 268/508 (52%), Gaps = 40/508 (7%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE---RDKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ +DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----LSQSNKPVVGPLYKAGGADSQ 288
+ +L KN D L+ + LL+ S ++ L Q K L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKG 653
Query: 289 KL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVV 347
+V +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC GVLE +
Sbjct: 654 MFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGI 713
Query: 348 RISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKL 405
RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y++G +K+
Sbjct: 714 RICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKI 773
Query: 406 FFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEY 465
FFR G + LE+ R+ + + I+A Q+ RG RK +
Sbjct: 774 FFRTGVLAHLEEERDLKITDV----------------------IIAFQAQCRGYLARKAF 811
Query: 466 ALVLQRHRAAVVIQRQIKSRVARQKLKN 493
A Q+ A VIQR A KL+N
Sbjct: 812 AKRQQQLTAMKVIQRNC---AAYLKLRN 836
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 268/508 (52%), Gaps = 40/508 (7%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE---RDKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ +DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----LSQSNKPVVGPLYKAGGADSQ 288
+ +L KN D L+ + LL+ S ++ L Q K L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKG 653
Query: 289 KL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVV 347
+V +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC GVLE +
Sbjct: 654 MFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGI 713
Query: 348 RISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKL 405
RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y++G +K+
Sbjct: 714 RICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKI 773
Query: 406 FFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEY 465
FFR G + LE+ R+ + + I+A Q+ RG RK +
Sbjct: 774 FFRTGVLAHLEEERDLKITDV----------------------IIAFQAQCRGYLARKAF 811
Query: 466 ALVLQRHRAAVVIQRQIKSRVARQKLKN 493
A Q+ A VIQR A KL+N
Sbjct: 812 AKRQQQLTAMKVIQRNC---AAYLKLRN 836
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 253/455 (55%), Gaps = 16/455 (3%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE---RDKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ +DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNM-----LSQSNKPVVGPLYKAGGADSQ 288
+ +L KN D L+ + LL+ S ++ L Q K L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKG 653
Query: 289 KL-SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVV 347
+V +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC GVLE +
Sbjct: 654 MFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGI 713
Query: 348 RISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKL 405
RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y++G +K+
Sbjct: 714 RICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKI 773
Query: 406 FFRAGQIGMLEDTRN-RTLHGILRVQSCFRGHQAR 439
FFR G + LE+ R+ + I+ Q+ RG+ AR
Sbjct: 774 FFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 276/517 (53%), Gaps = 52/517 (10%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER---DKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ + DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 293
+ +L KN D L+ + LL+ S F +++ ++ +VG L + L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSS----DKFVADLWKDVDR-IVG-LDQMAKMTESSLPSA 647
Query: 294 TK------------FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+K +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC
Sbjct: 648 SKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCN 707
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y+
Sbjct: 708 GVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYR 767
Query: 400 VGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGE 459
+G +K+FFR G + LE+ R+ + + I+A Q+ RG
Sbjct: 768 IGQSKIFFRTGVLAHLEEERDLKITDV----------------------IIAFQAQCRGY 805
Query: 460 KIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKNIKY 496
RK +A Q+ A VIQR A KL+N ++
Sbjct: 806 LARKAFAKRQQQLTAMKVIQRNC---AAYLKLRNWQW 839
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 259/461 (56%), Gaps = 28/461 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE---RDKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ +DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 293
+ +L KN D L+ + LL+ S F +++ ++ +VG L + L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSS----DKFVADLWKDVDR-IVG-LDQMAKMTESSLPSA 647
Query: 294 TK------------FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+K +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC
Sbjct: 648 SKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCN 707
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y+
Sbjct: 708 GVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYR 767
Query: 400 VGYTKLFFRAGQIGMLEDTRN-RTLHGILRVQSCFRGHQAR 439
+G +K+FFR G + LE+ R+ + I+ Q+ RG+ AR
Sbjct: 768 IGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 249/441 (56%), Gaps = 27/441 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
++++VL LGN+ F N + + V L+G ++ + ++ T +++VG D +
Sbjct: 354 VVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVV 413
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ + LF W++ ++NK+L KR+ + ILDI GFE F+
Sbjct: 414 QKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFEI 473
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KP 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI+W +DF D + C+ L E+ P
Sbjct: 474 NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNP 533
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGE---RDKS-FTVSHYAGEVIYDT 233
G+L+LLDEE FP TD +F KL Q ++ F+ +DK+ F + HYAG+V Y+
Sbjct: 534 PGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNA 593
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 293
+ +L KN D L+ + LL+ S F +++ ++ +VG L + L A
Sbjct: 594 SAWLTKNMDPLNDNVTSLLNQSS----DKFVADLWKDVDR-IVG-LDQMAKMTESSLPSA 647
Query: 294 TK------------FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCC 341
+K +K QL +LM L +T P+F+RCI PN+ + G + LVL+QLRC
Sbjct: 648 SKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCN 707
Query: 342 GVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQ 399
GVLE +RI R GFP R+ Q+F +RY L ++ D + ++ + P +Y+
Sbjct: 708 GVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDGKQACILMIKALELDPNLYR 767
Query: 400 VGYTKLFFRAGQIGMLEDTRN 420
+G +K+FFR G + LE+ R+
Sbjct: 768 IGQSKIFFRTGVLAHLEEERD 788
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 220/362 (60%), Gaps = 22/362 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV++IN L + R I +LDIYGFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 354 FP 355
FP
Sbjct: 691 FP 692
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 254/484 (52%), Gaps = 29/484 (5%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTI 60
M++AVL GN++ N + + + +L+G + + AL T +++VG D +
Sbjct: 323 MVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYV 382
Query: 61 VQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDR 120
+ T QA +ALAK+ Y LF WLV ++N++L R+ + ILDI GFE F
Sbjct: 383 QKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQL 442
Query: 121 NSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKK--P 177
NSFEQ CINY NE+LQQ FN +F LEQEEY ++GI W +DF D + C++L E+ P
Sbjct: 443 NSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANP 502
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCF---RGERDKS-FTVSHYAGEVIYDT 233
GLL+LLDEE FP TD +F K+ Q +P F R RD++ F+V HYAG+V Y
Sbjct: 503 PGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKA 562
Query: 234 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL--- 290
+L KN D L+ + LL + L + + + + +VG + D
Sbjct: 563 NEWLMKNMDPLNDNVAALLHQSTDRL-----TAEIWKDVEGIVGLEQVSSLGDGPPGGRP 617
Query: 291 ------SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVL 344
+V +K L +LM L +T P F+RCI PN+ + G E LVL QLRC GVL
Sbjct: 618 RRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVL 677
Query: 345 EVVRISRSGFPTRMSHQKFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGY 402
E +RI R GFP R+ Q+F +RY L ++ D ++ + P +Y+VG
Sbjct: 678 EGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQ 737
Query: 403 TKLFFRAGQIGMLED------TRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFI 456
+K+FFRAG + LE+ T++ L + QA L ++ I ++QSF+
Sbjct: 738 SKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFM 797
Query: 457 RGEK 460
K
Sbjct: 798 NAHK 801
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 220/365 (60%), Gaps = 22/365 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDT 59
++A +L LGN+ F E V + D+ + A + G + L+ AL ++ G D
Sbjct: 346 IIAGILHLGNIKFEKGAGEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDL 403
Query: 60 IVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFD 119
+ Q+L + +++ +RDAL K++Y LF WLV +IN L + R I +LDI GFE F
Sbjct: 404 VAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFK 461
Query: 120 RNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKP 177
NSFEQ CINY NE+LQQ FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P
Sbjct: 462 VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQP 521
Query: 178 LGLLSLLDEESTFPNGTDLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTT 234
G+L+LLDE+S FPN TD T KL H + N + R F V+HYAG+V+Y+
Sbjct: 522 PGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQ 581
Query: 235 GFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVA 293
+LEKN+D L D +EL S + N++++ N P + K G + ++VA
Sbjct: 582 DWLEKNKDPLQQD-LELCFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVA 630
Query: 294 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 353
++K QL LM LE+T PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R G
Sbjct: 631 AQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKG 690
Query: 354 FPTRM 358
FP R+
Sbjct: 691 FPNRI 695
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 233/433 (53%), Gaps = 28/433 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 340 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 399
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 400 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 457
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 458 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 517
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 518 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 577
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 578 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 633
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 634 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 691
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 692 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 751
Query: 401 GYTKLFFRAGQIG 413
G TK+FFR G+
Sbjct: 752 GLTKVFFRPGKFA 764
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 339 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 398
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 399 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 456
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 457 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 516
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 517 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 576
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 577 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 632
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 633 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 690
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 691 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 750
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 751 GLTKVFFRPGKFAEFD 766
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 225/428 (52%), Gaps = 36/428 (8%)
Query: 1 MLAAVLWLGNVSFTVIDNE----NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVG 56
+LAA+L +GN++F + V+ + L A + D L +AL R + G
Sbjct: 269 ILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSISTG 328
Query: 57 ----NDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
+ I + +QA +RDALAK++Y LF WLV +IN + + G I ILDI
Sbjct: 329 VGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK-GPVIGILDI 387
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
YGFE F NSFEQ IN+ NE+LQQ F K EQEEY+++GI+W +++ +NK L
Sbjct: 388 YGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICEL 447
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCF--------RGERDKSFTVSH 224
EKKP+GL+SLLDE TD TF + + + NP R D F + H
Sbjct: 448 IEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKH 507
Query: 225 YAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGG 284
YAG+V YD GFL+KN+D L D I S+M S S+ V G
Sbjct: 508 YAGDVTYDVRGFLDKNKDTLFGDLI---------------SSMQSSSDPLVQGLFPPTRP 552
Query: 285 ADSQKL--SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCG 342
DS+K + ++F+ + L+ L + +PH++RCIK N+ + G+ ++ V Q+R G
Sbjct: 553 EDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLG 612
Query: 343 VLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLS--VSVAILHQFNILPEMYQV 400
+LE VR+ R+GF R+ + +F RY L ++ S + + + IL Q NI E ++
Sbjct: 613 LLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRM 672
Query: 401 GYTKLFFR 408
G TK+F R
Sbjct: 673 GKTKVFIR 680
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 339 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 398
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 399 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 456
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 457 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 516
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 517 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 576
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 577 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 632
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 633 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 690
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 691 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 750
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 751 GLTKVFFRPGKFAEFD 766
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 339 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 398
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 399 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 456
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 457 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 516
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 517 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 576
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 577 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 632
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 633 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 690
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 691 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 750
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 751 GLTKVFFRPGKFAEFD 766
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 313 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 372
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 373 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 430
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 431 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 490
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 491 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 550
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 551 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 606
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 607 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 664
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 665 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 724
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 725 GLTKVFFRPGKFAEFD 740
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 233/433 (53%), Gaps = 28/433 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 314 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 373
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 374 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 431
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 432 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 491
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 492 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 551
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 552 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 607
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 608 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 665
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 666 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 725
Query: 401 GYTKLFFRAGQIG 413
G TK+FFR G+
Sbjct: 726 GLTKVFFRPGKFA 738
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 313 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 372
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 373 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 430
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 431 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 490
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 491 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 550
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 551 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 606
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 607 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 664
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 665 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 724
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 725 GLTKVFFRPGKFAEFD 740
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 337 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 396
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 397 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 454
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 455 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 514
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 515 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 574
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 575 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 630
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 631 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 688
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 689 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 748
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 749 GLTKVFFRPGKFAEFD 764
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 224/428 (52%), Gaps = 36/428 (8%)
Query: 1 MLAAVLWLGNVSFTVIDNE----NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVG 56
+LAA+L +GN++F + V+ + L A + D L +AL R + G
Sbjct: 269 ILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSISTG 328
Query: 57 ----NDTIVQNLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
I + +QA +RDALAK++Y LF WLV +IN + + G I ILDI
Sbjct: 329 VGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK-GPVIGILDI 387
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
YGFE F NSFEQ IN+ NE+LQQ F K EQEEY+++GI+W +++ +NK L
Sbjct: 388 YGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICEL 447
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCF--------RGERDKSFTVSH 224
EKKP+GL+SLLDE TD TF + + + NP R D F + H
Sbjct: 448 IEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKH 507
Query: 225 YAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGG 284
YAG+V YD GFL+KN+D L D I S+M S S+ V G
Sbjct: 508 YAGDVTYDVRGFLDKNKDTLFGDLI---------------SSMQSSSDPLVQGLFPPTRP 552
Query: 285 ADSQKL--SVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCG 342
DS+K + ++F+ + L+ L + +PH++RCIK N+ + G+ ++ V Q+R G
Sbjct: 553 EDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLG 612
Query: 343 VLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLS--VSVAILHQFNILPEMYQV 400
+LE VR+ R+GF R+ + +F RY L ++ S + + + IL Q NI E ++
Sbjct: 613 LLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRM 672
Query: 401 GYTKLFFR 408
G TK+F R
Sbjct: 673 GKTKVFIR 680
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 336 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 395
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 396 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 453
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 454 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 513
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 514 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 573
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 574 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 629
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 630 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 687
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 688 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 747
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 748 GLTKVFFRPGKFAEFD 763
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 233/433 (53%), Gaps = 28/433 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 349 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 408
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 409 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 466
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 467 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 526
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 527 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 586
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 587 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 642
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 643 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 700
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 701 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 760
Query: 401 GYTKLFFRAGQIG 413
G TK+FFR G+
Sbjct: 761 GLTKVFFRPGKFA 773
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 28/436 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 340 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 399
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 400 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 457
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 458 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 517
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSF 220
E + +G+L +LDEE+ P +D F + K K H S P R R D+ F
Sbjct: 518 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGF 577
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 578 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 633
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 634 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 691
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 692 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 751
Query: 401 GYTKLFFRAGQIGMLE 416
G TK+FFR G+ +
Sbjct: 752 GLTKVFFRPGKFAEFD 767
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 230/433 (53%), Gaps = 28/433 (6%)
Query: 1 MLAAVLWLGNVSFTVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV-- 55
++A VL LGN+ F + + +++ + + L A+L+G D +L+++L+TR M
Sbjct: 349 VVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 408
Query: 56 --GNDTIVQ-NLTLSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDI 112
T+++ L + QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI
Sbjct: 409 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDI 466
Query: 113 YGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNL 172
GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L
Sbjct: 467 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 526
Query: 173 FEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNPCFRGER------------DKSF 220
E + +G+L +LDEE+ P +D F + + Q + R D+ F
Sbjct: 527 IEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGF 586
Query: 221 TVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLY 280
+ H+AG V Y+TT F+EKN D LH+ L S C F + S
Sbjct: 587 IIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQ 642
Query: 281 KAGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRC 340
KAG +SV KFK QL L+ +L ST FIRCIKPN + +E +L QL+C
Sbjct: 643 KAGKLSF--ISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQC 700
Query: 341 CGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQV 400
G++ V+ + + GFP+R S + Y + + +A DP A+ + Y+
Sbjct: 701 SGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKF 760
Query: 401 GYTKLFFRAGQIG 413
G TK+FFR G+
Sbjct: 761 GLTKVFFRPGKFA 773
>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
pdb|3ODT|B Chain B, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
Length = 313
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 435 GHQARLCLKELRRGIVALQSFIRGEKIRKEYALV--LQRHRAAV 476
GHQ +C + G+V S+ + K+ KE +LV LQ H A+V
Sbjct: 102 GHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASV 145
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 444 ELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVAR 488
+LR + +Q IRG +RK Y L RAA+ +QR ++ AR
Sbjct: 3 KLRAACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQAR 44
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,163,599
Number of Sequences: 62578
Number of extensions: 789567
Number of successful extensions: 2072
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1706
Number of HSP's gapped (non-prelim): 85
length of query: 745
length of database: 14,973,337
effective HSP length: 106
effective length of query: 639
effective length of database: 8,340,069
effective search space: 5329304091
effective search space used: 5329304091
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)